Plasmodium gaboni strain SY75 chromosome 7, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (17-OCT-2016) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003862.\nAssembly created using Velvet Columbus followed by SSPACE followed\nby PAGIT and GapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; SSPACE v. 2.0; PAGIT v.\n 1; GapFiller v. 1.11\nGenome Coverage :: 90x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
sporozoite threonine and asparagine-rich protein
Plasmodium exported protein, unknown function
ortholog of PF3D7_0702600; truncated fragment
conserved Plasmodium protein, unknown function
gap found within coding sequence; ortholog of PF3D7_0703900
conserved Plasmodium membrane protein, unknown function; part of same gene as PGSY75_0703900A; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function; part of same gene as PGSY75_0703900B; gap found within coding sequence
conserved Plasmodium membrane protein, unknown function
putative phosphoinositide-binding protein
putative serine/threonine protein kinase
phosphopantetheine adenylyltransferase, putative; ortholog of PF3D7_0704700; may be nonfunctional due to frameshift
putative origin recognition complex subunit 2
putative DNA replication licensing factor MCM7
putative cysteine-rich secretory protein
putative DNA mismatch repair protein MSH2
putative cytoskeleton associated protein
putative O-sialoglycoprotein endopeptidase
similar to DNA sequence:PlasmoDB:PF3D7_0707420
putative inner membrane complex protein 1d
heat shock protein 110; ortholog of PF3D7_0708800; internal stop codon likely due to assembler error
similar to DNA sequence:PlasmoDB:PF3D7_0709050
putative ribonucleases P/MRP protein subunit POP1
putative 50S ribosomal protein L1, mitochondrial
sin3 associated polypeptide p18-like protein
putative regulator of chromosome condensation
EMP1-like protein, putative; ortholog of PF3D7_0713300; fragment
putative mitochondrial ribosomal protein S5 precursor
putative transcription elongation factor s-II
similar to DNA sequence:PlasmoDB:PF3D7_0714900
putative calcium/calmodulin-dependent protein kinase
putative mitochondrial ATP synthase F1, epsilon subunit
putative GTP-binding translation elongation factor tu family protein
drug/metabolite exporter, drug/metabolite transporter
putative transcription initiation factor IIA subunit 1
putative eukaryotic translation initiation factor 3 37.28 kDa subunit
putative transcription initiation factor IIE, alpha subunit
putative queuine tRNA-ribosyltransferase
gap found within coding sequence; ortholog of PF3D7_0718000
part of same gene as PGSY75_0718000A; gap found within coding sequence
part of same gene as PGSY75_0718000B; gap found within coding sequence
exported serine/threonine protein kinase
putative mitochondrial ribosomal protein S8 precursor
conserved membrane protein, unknown function
putative small subunit rRNA processing protein
putative DEAD/DEAH box ATP-dependent RNA helicase
rhoptry-associated leucine zipper-like protein 1
putative ubiquitin carboxyl-terminal hydrolase
gap found within coding sequence; ortholog of PF3D7_0722400
part of same gene as PGSY75_0722400B; gap found within coding sequence
part of same gene as PGSY75_0722400A; gap found within coding sequence
putative cell cycle control protein cwf15
putative nucleolar rRNA processing protein
putative metallo-hydrolase/oxidoreductase
hypothetical protein; ortholog of PF3D7_0723800; internal stop codons likely due to assembler error
putative Rab GTPase activator and protein kinase
putative type 2A phosphatase-associated protein 42
putative 3-demethylubiquinone-9 3-methyltransferase
putative mitochondrial import inner membrane translocase subunit TIM14
gap found within coding sequence; ortholog of PF3D7_0724500
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0724500B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0724500A; gap found within coding sequence
similar to DNA sequence:PlasmoDB:PF3D7_0725600
similar to DNA sequence:PlasmoDB:PF3D7_0725800
similar to DNA sequence:PlasmoDB:PF3D7_0726000
serine/threonine protein kinase, FIKK family
putative DNA mismatch repair protein PMS1
putative mitochondrial import inner membrane translocase subunit TIM50
putative vacuolar protein sorting-associated protein 53
putative proteasome subunit alpha type-5
putative eukaryotic translation initiation factor 2 alpha subunit
encoded by transcript variant 2; alternatively spliced
encoded by transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
ortholog of PF3D7_0728500; Starts late compared with Pf3D7
signal recognition particle subunit SRP9
putative 60S ribosomal export protein NMD3
ribosome biogenesis protein BRX1-like protein
putative mRNA (N6-adenosine)-methyltransferase
similar to DNA sequence:PlasmoDB:PF3D7_0730600
similar to DNA sequence:PlasmoDB:PF3D7_0730700
Plasmodium exported protein, unknown function; transcript variant 2; alternatively spliced
Plasmodium exported protein, unknown function; transcript variant 1; alternatively spliced
exported protein (hyp9); ortholog of PF3D7_0731700; likely nonfunctional due to stop codon