Plasmodium gaboni strain SY75 chromosome 4, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (17-OCT-2016) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003859.\nAssembly created using Velvet Columbus followed by SSPACE followed\nby PAGIT and GapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; SSPACE v. 2.0; PAGIT v.\n 1; GapFiller v. 1.11\nGenome Coverage :: 90x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
gap found within coding sequence; ortholog of PF3D7_0402200
surface-associated interspersed protein 4.1 (SURFIN 4.1)
part of same gene as PGSY75_0402200A; gap found within coding sequence
part of same gene as PGSY75_0402200B; gap found within coding sequence
Plasmodium exported protein, unknown function
similar to DNA sequence:PlasmoDB:PF3D7_0403000
putative regulator of chromosome condensation
conserved Plasmodium protein, unknown function
putative transcription factor with AP2 domain(s)
conserved Plasmodium membrane protein, unknown function
gap found within coding sequence; ortholog of PF3D7_0405200
ag-1 blood stage membrane protein-like protein
part of same gene as PGSY75_0405200B, PGSY75_0405200C; gap found within coding sequence
part of same gene as PGSY75_0405200A, PGSY75_0405200C; gap found within coding sequence
part of same gene as PGSY75_0405200A, PGSY75_0405200B; gap found within coding sequence
putative pre-mRNA-processing-splicing factor 8
ortholog of PF3D7_0406400; missing exons 2-5 may be due to assembler error
similar to DNA sequence:PlasmoDB:PF3D7_0406400
similar to DNA sequence:PlasmoDB:PF3D7_0406600
putative zinc finger, RAN binding protein
sporozoite invasion-associated protein 1
sporozoite micronemal protein essential for cell traversal
putative U4/U6 small nuclear ribonucleoprotein PRP31
putative 40S ribosomal processing protein
gap found within coding sequence; ortholog of PF3D7_0409900
part of same gene as PGSY75_0409900A; gap found within coding sequence
part of same gene as PGSY75_0409900B; gap found within coding sequence
similar to DNA sequence:PlasmoDB:PF3D7_0410100
similar to DNA sequence:PlasmoDB:PF3D7_0410200
putative DEAD box ATP-dependent RNA helicase
putative mitochondrial ribosomal protein S12 precursor
putative phosphopantothenoylcysteine synthetase
putative ubiquitin carboxyl-terminal hydrolase 13
encoded by transcript variant 1; alternatively spliced
encoded by transcript variant 2; alternatively spliced
transcript variant 1; alternatively spliced
transcript variant 2; alternatively spliced
ortholog of PF3D7_0414800; Ends earlier than Pf3D7
armadillo-domain containing rhoptry protein
putative glutamyl-tRNA(Gln) amidotransferase subunit A
putative repressor of RNA polymerase III transcription MAF1
putative CDGSH iron-sulfur domain-containing protein
bifunctional dihydrofolate reductase-thymidylate synthase
gap found within coding sequence; ortholog of PF3D7_0417400
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0417400B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0417400A; gap found within coding sequence
gap found within coding sequence; ortholog of PF3D7_0418000
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0418000B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0418000A; gap found within coding sequence
putative golgi organization and biogenesis factor
putative trafficking protein particle complex subunit 3
gap found within coding sequence; ortholog of PF3D7_0419400
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0419400B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0419400A; gap found within coding sequence
putative 60S ribosomal protein L7ae/L30e
gap found within coding sequence; ortholog of PF3D7_0419900
similar to DNA sequence:PlasmoDB:PF3D7_0419900
part of same gene as PGSY75_0419900B; gap found within coding sequence
part of same gene as PGSY75_0419900A; gap found within coding sequence
putative holo-(acyl-carrier protein) synthase
EMP1-like protein, putative; syntenic with PF3D7_0421600; fragment
putative transmembrane emp24 domain-containing protein
putative pre-mRNA-splicing helicase BRR2
glideosome associated protein with multiple membrane spans 2
gap found within coding sequence; ortholog of PF3D7_0423900
part of same gene as PGSY75_0423900A; gap found within coding sequence
part of same gene as PGSY75_0423900B; gap found within coding sequence
surface-associated interspersed protein 4.2 (SURFIN 4.2)
serine/threonine protein kinase, FIKK family