Plasmodium gaboni strain SY75 chromosome 2, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (17-OCT-2016) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003857.\nAssembly created using Velvet Columbus followed by SSPACE followed\nby PAGIT and GapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; SSPACE v. 2.0; PAGIT v.\n 1; GapFiller v. 1.11\nGenome Coverage :: 90x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
conserved Plasmodium protein, unknown function
encoded by transcript variant 2; alternatively spliced
encoded by transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
putative ERCC1 nucleotide excision repair protein
putative nucleolar preribosomal assembly protein
putative 5'-3' exonuclease, N-terminal resolvase-like domain
putative DNA-directed RNA polymerase II 16 kDa subunit
putative 26S proteasome regulatory subunit RPN1
putative pentafunctional AROM polypeptide
transcript variant 2; alternatively spliced
transcript variant 1; alternatively spliced
gap found within coding sequence; ortholog of PF3D7_0208100
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0208100B.1; transcript variant 1; alternatively spliced; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0208100A.1; transcript variant 1; alternatively spliced; gap found within coding sequence
putative KRR1 small subunit processome component
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
gap found within coding sequence; ortholog of PF3D7_0209400
part of same gene as PGSY75_0209400A; gap found within coding sequence
part of same gene as PGSY75_0209400B; gap found within coding sequence
unknown; annotated by similarity to unknown transcript annotated in Pf3D7
putative dolichol-linked oligosaccharide biosynthesis enzyme
putative mitochondrial ribosomal protein L12 precursor
putative peptide chain release factor subunit 1
conserved Plasmodium membrane protein, unknown function
altered thrombospondin repeat domain-containing secreted protein
putative mitochondrial ribosomal protein L13 precursor
gap found within coding sequence; ortholog of PF3D7_0214300
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0214300B; gap found within coding sequence
conserved Plasmodium protein, unknown function; part of same gene as PGSY75_0214300A; gap found within coding sequence
putative serine/threonine protein kinase
putative DNA-directed RNA polymerase II second largest subunit
putative vacuolar protein sorting-associated protein 45
gap found within coding sequence; ortholog of PF3D7_0217500
part of same gene as PGSY75_0217500B; gap found within coding sequence
part of same gene as PGSY75_0217500A; gap found within coding sequence
gap found within coding sequence; ortholog of PF3D7_0218300
putative apicoplast RNA methyltransferase precursor
part of same gene as PGSY75_0218300A; gap found within coding sequence
part of same gene as PGSY75_0218300B; gap found within coding sequence
putative DEAD/DEAH box ATP-dependent RNA helicase
putative small nuclear ribonucleoprotein Sm D2
similar to DNA sequence:PlasmoDB:PF3D7_0219000
putative ribosome associated membrane protein RAMP4
Plasmodium exported protein, unknown function
similar to DNA sequence:PlasmoDB:PF3D7_0220500
exported protein (hyp9); ortholog of PF3D7_0220700; multiple stop codons