Plasmodium gaboni strain SY75 chromosome 1, whole genome shotgun sequence.
Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania).
Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria
Submitted (17-OCT-2016) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (07-MAR-2016) Department of Medicine, Perelman School of Medicine, University of Pennsylvania, 409 Johnson Pavilion, 3610 Hamilton Walk, Philadelphia, PA 19104, USA
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM003856.\nAssembly created using Velvet Columbus followed by SSPACE followed\nby PAGIT and GapFiller.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Velvet v. 1.1.06; SSPACE v. 2.0; PAGIT v.\n 1; GapFiller v. 1.11\nGenome Coverage :: 90x\nSequencing Technology :: Illumina MiSeq\n##Genome-Assembly-Data-END##
ring-infected erythrocyte surface antigen
Plasmodium exported protein, unknown function
gap found within coding sequence; ortholog of PF3D7_0102400
part of same gene as PGSY75_0102400A; gap found within coding sequence
part of same gene as PGSY75_0102400B; gap found within coding sequence
serine/threonine protein kinase, FIKK family
putative merozoite-associated tryptophan-rich antigen
conserved Plasmodium protein, unknown function
putative vacuolar protein sorting-associated protein VTA1
putative vacuolar protein sorting-associated protein 51
parasite-infected erythrocyte surface protein
similar to DNA sequence:PlasmoDB:PF3D7_0103900
thrombospondin-related sporozoite protein
conserved Plasmodium membrane protein, unknown function
putative ubiquitin carboxyl-terminal hydrolase 1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
unknown; annotated by similarity to unknown transcript annotated in Pf3D7
encoded by transcript variant 2; alternatively spliced
encoded by transcript variant 1; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 2; alternatively spliced
conserved Plasmodium protein, unknown function; transcript variant 1; alternatively spliced
putative vacuolar ATP synthase subunit c
putative pre-rRNA-processing protein TSR2
small ribosomal subunit assembling AARP2 protein
putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
transcript variant 1; alternatively spliced
putative carbon catabolite repressor protein 4
putative serine/threonine protein kinase
putative double-strand break repair protein MRE11
transcript variant 2; alternatively spliced
putative photosensitized INA-labeled protein 1, PhIL1
putative mRNA cleavage factor-like protein
putative fatty acid elongation protein, GNS1/SUR4 family
putative phosphatidate cytidylyltransferase
selenocysteine-specific elongation factor selB- like protein
putative FAD-linked sulfhydryl oxidase ERV1
phosphatidylinositol-4-phosphate 5-kinase
putative chromatin assembly factor 1 protein WD40 domain
putative transcription initiation factor TFIIB
multidrug resistance-associated protein 1
surface-associated interspersed protein 1.1 (SURFIN 1.1)
surface-associated interspersed protein 1.2 (SURFIN 1.2)
DBL containing protein, unknown function
Pfmc-2TM Maurer's cleft two transmembrane protein; ortholog of PF3D7_0114100; multiple frameshifts and stop codons
similar to DNA sequence:PlasmoDB:PF3D7_0114100