Lagopus muta isolate bLagMut1 chromosome 38, bLagMut1 primary, whole genome shotgun sequence.
type: Entry
definition: Lagopus muta isolate bLagMut1 chromosome 38, bLagMut1 primary, whole genome shotgun sequence.
sequence version: NC_064470.1
sequence date: 2022-07-07
sequence: sequence
division: CON
label: NC_064470.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA853367
dblink: SAMN25144835
keyword: WGS
keyword: RefSeq
source: Lagopus muta (rock ptarmigan)
organism: Lagopus muta
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM041513.1.\nAssembly name: bLagMut1 primary\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/05/12. The original whole-genome shotgun project has the\naccession JAMCCT000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 17-JUL-2021\nAssembly Method :: Minimap2 v. 0.15.1-r334; purge_dups v.\n 1.2.5; salsa v. 2.3\nAssembly Name :: bLagMut1 primary\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 57.75x\nSequencing Technology :: PacBio Sequel II HiFi; Dovetail genomics\n Hi-C; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: Lagopus muta Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 54903
topology: linear
so has quality: SO_0000987
location: 1..54903
location: region:1-54903:1
RO_0002162: 64668

NC_064470
type: RefSeq
SIO_000068: refseq

PRJNA853367
type: BioProject
SIO_000068: bioproject

SAMN25144835
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54903:1
position: 54903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-54903:1:source
so part of: sequence
organism: Lagopus muta
mol type: genomic DNA
isolate: bLagMut1
chromosome: 38
sex: female
tissue type: blood
dev stage: adult
country: Iceland: Husavik, NE
lat lon: 66.088900 N 17.264700 W
collected by: Kristinn P. Magnusson

64668
type: Taxonomy
SIO_000068: taxonomy

LOC125686387
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: LOC125686387
note: zinc finger protein ubi-d4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2916..54677)
location: region:2916-54677:-1
so has part: feature:2916-54677:-1:exon
subclass of: SO_0000010

125686387
type: Gene
SIO_000068: ncbigene

position:2916:-1
position: 2916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54677:-1
position: 54677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2916-54677:-1:exon

LOC125686387
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686387
product: zinc finger protein ubi-d4-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_048930307.1
SIO_010081: LOC125686387
subclass of: SO_0000673
so part of: LOC125686387
location: complement(join(2916..2997,7448..7529,9321..9433,25181..25309,29518..29655,37100..37141,41367..41445,41607..41699,42934..43098,44505..44612,47815..47974,54631..54677))
location: region:2916-54677:-1
so has part: feature:54631-54677:-1:exon
so has part: feature:47815-47974:-1:exon
so has part: feature:44505-44612:-1:exon
so has part: feature:42934-43098:-1:exon
so has part: feature:41607-41699:-1:exon
so has part: feature:41367-41445:-1:exon
so has part: feature:37100-37141:-1:exon
so has part: feature:29518-29655:-1:exon
so has part: feature:25181-25309:-1:exon
so has part: feature:9321-9433:-1:exon
so has part: feature:7448-7529:-1:exon
so has part: feature:2916-2997:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54631-54677:-1:exon

position:54631:-1
position: 54631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47815-47974:-1:exon

position:47815:-1
position: 47815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47974:-1
position: 47974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44505-44612:-1:exon

position:44505:-1
position: 44505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44612:-1
position: 44612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42934-43098:-1:exon

position:42934:-1
position: 42934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43098:-1
position: 43098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:41607-41699:-1:exon

position:41607:-1
position: 41607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41699:-1
position: 41699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:41367-41445:-1:exon

position:41367:-1
position: 41367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41445:-1
position: 41445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:37100-37141:-1:exon

position:37100:-1
position: 37100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37141:-1
position: 37141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:29518-29655:-1:exon

position:29518:-1
position: 29518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29655:-1
position: 29655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:25181-25309:-1:exon

position:25181:-1
position: 25181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25309:-1
position: 25309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9321-9433:-1:exon

position:9321:-1
position: 9321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9433:-1
position: 9433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7448-7529:-1:exon

position:7448:-1
position: 7448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7529:-1
position: 7529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2916-2997:-1:exon

position:2997:-1
position: 2997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125686387
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686387
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein ubi-d4-like
translation: MAAVVQNVVKLLGEQYYRDAMEQCHNYNARLCAERSVRXPFLDSQTGVAQSNCYIWMEKRHRGPGLAAGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTDQTLKKEGLISQDGSSLEALLRTDPLEKRSLPDPRMDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRRGKGKAKGKGVGGARKKLDAAILEDRDKPYACDNSYKQKHSLKPPDRVCGKRYKNRPGLSYHYAHSHLAEEEGDDKDDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFCLGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKEKASIYQNQNNS
SIO_010081: LOC125686387
subclass of: SO_0000673
so part of: LOC125686387
location: complement(join(2921..2997,7448..7529,9321..9433,25181..25309,29518..29655,37100..37141,41367..41445,41607..41699,42934..43098,44505..44612,47815..47974,54631..54662))
location: region:2921-54662:-1
so has part: feature:54631-54662:-1:exon
so has part: feature:47815-47974:-1:exon
so has part: feature:44505-44612:-1:exon
so has part: feature:42934-43098:-1:exon
so has part: feature:41607-41699:-1:exon
so has part: feature:41367-41445:-1:exon
so has part: feature:37100-37141:-1:exon
so has part: feature:29518-29655:-1:exon
so has part: feature:25181-25309:-1:exon
so has part: feature:9321-9433:-1:exon
so has part: feature:7448-7529:-1:exon
so has part: feature:2921-2997:-1:exon

XP_048786264.1
type: Protein
SIO_000068: ncbiprotein

position:2921:-1
position: 2921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54662:-1
position: 54662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54631-54662:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47815-47974:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:44505-44612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42934-43098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41607-41699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41367-41445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:37100-37141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29518-29655:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:25181-25309:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9321-9433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7448-7529:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2921-2997:-1:exon

LOC125686386
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: LOC125686386
note: shematrin-like protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 32336..34204
location: region:32336-34204:1
so has part: feature:32336-34204:1:exon
subclass of: SO_0000010

125686386
type: Gene
SIO_000068: ncbigene

position:32336:1
position: 32336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34204:1
position: 34204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32336-34204:1:exon

LOC125686386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686386
product: shematrin-like protein 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930301.1
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32336..33121,33162..34204)
location: region:32336-34204:1
so has part: feature:32336-33121:1:exon
so has part: feature:33162-34204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32336-33121:1:exon

position:33121:1
position: 33121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33162-34204:1:exon

position:33162:1
position: 33162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125686386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686386
product: shematrin-like protein 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930304.1
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32336..33011,33260..34204)
location: region:32336-34204:1
so has part: feature:32336-33011:1:exon
so has part: feature:33260-34204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32336-33011:1:exon

position:33011:1
position: 33011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33260-34204:1:exon

position:33260:1
position: 33260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125686386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686386
product: shematrin-like protein 2, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930306.1
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32336..33011,33358..34204)
location: region:32336-34204:1
so has part: feature:32336-33011:1:exon
so has part: feature:33358-34204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32336-33011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33358-34204:1:exon

position:33358:1
position: 33358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125686386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686386
product: shematrin-like protein 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930305.1
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32336..32943,33260..34204)
location: region:32336-34204:1
so has part: feature:32336-32943:1:exon
so has part: feature:33260-34204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32336-32943:1:exon

position:32943:1
position: 32943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33260-34204:1:exon

LOC125686386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686386
product: shematrin-like protein 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930303.1
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32337..33121,33338..34204)
location: region:32337-34204:1
so has part: feature:32337-33121:1:exon
so has part: feature:33338-34204:1:exon

position:32337:1
position: 32337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32337-33121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33338-34204:1:exon

position:33338:1
position: 33338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125686386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686386
product: shematrin-like protein 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930302.1
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32337..33061,33260..34204)
location: region:32337-34204:1
so has part: feature:32337-33061:1:exon
so has part: feature:33260-34204:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32337-33061:1:exon

position:33061:1
position: 33061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33260-34204:1:exon

LOC125686386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125686386 isoform X1
translation: MGGRNQIGEEWRGGEKWGGLYGVCGVHGGLWGCMGCMGLNGAVWRLMGLYGGLWAAWVVWGLYGGLWVCMEVYGLHGGLWGCMGLYGGLWGCMEVYGGCMEVYGVYGCVGLNGAVWRLMGCMEVYGVVWRLMGCMEVYGVVWRFMGCMEVYGAVWMFMGLYGAIWGCMGLYGAVWRLMGLYGMCGVHGGLWGCMEAYGVYGAVWAVWGCMEVYGAVWGCMELYGAVWRFMGLYGVVWSCMGLYGVVWRFMGLYGAVWSCMGLYGAVWRLMGLYGMCGVHGGLWGCMEAYGVYGAVWAVWGCMELYGGLWGCMEVYGAVWRLMGCMGLYGLYGAVWSCMEVYGAVWRFMGLYGVCGAVWGCMELYGVVWRLMGFMGCVGLFAFMWVRKGGNARITEGQNVLNNPEDIK
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32379..33121,33162..33642)
location: region:32379-33642:1
so has part: feature:32379-33121:1:exon
so has part: feature:33162-33642:1:exon

XP_048786258.1
type: Protein
SIO_000068: ncbiprotein

position:32379:1
position: 32379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33642:1
position: 33642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32379-33121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33162-33642:1:exon

LOC125686386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125686386 isoform X6
translation: MGGRNQIGEEWRGGEKWGGLYGVCGVHGGLWGCMGCMGLNGAVWRLMGLYGGLWAAWVVWGLYGGLWVCMEVYGLHGGLWGCMGLYGGLWGCMEVYGGCMEVYGVYGCVGLNGAVWRLMGCMEVYGVVWRLMGCMEVYGVVWRFMGCMEVYGAVWMFMGLYGAIWGCMGLYGAVWRLMGLYGMCGVHGGLWGCMEAYGVYGAVWAVWGCMEVYGAVWRLMGCMGLYGLYGAVWSCMEVYGAVWRFMGLYGVCGAVWGCMELYGVVWRLMGFMGCVGLFAFMWVRKGGNARITEGQNVLNNPEDIK
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32379..33011,33358..33642)
location: region:32379-33642:1
so has part: feature:32379-33011:1:exon
so has part: feature:33358-33642:1:exon

XP_048786263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32379-33011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33358-33642:1:exon

LOC125686386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125686386 isoform X5
translation: MGGRNQIGEEWRGGEKWGGLYGVCGVHGGLWGCMGCMGLNGAVWRLMGLYGGLWAAWVVWGLYGGLWVCMEVYGLHGGLWGCMGLYGGLWGCMEVYGGCMEVYGVYGCVGLNGAVWRLMGCMEVYGVVWRLMGCMEVYGVVWRFMGCMEVYGAVWMFMGLYGAIWGCMGLYGAVWRLMGLYGMCGVHGGLWGCMEAYGVYGAVWAVWGCMELYGGLWGCMEVYGAVWRLMGCMGLYGLYGAVWSCMEVYGAVWRFMGLYGVCGAVWGCMELYGVVWRLMGFMGCVGLFAFMWVRKGGNARITEGQNVLNNPEDIK
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32379..32943,33260..33642)
location: region:32379-33642:1
so has part: feature:32379-32943:1:exon
so has part: feature:33260-33642:1:exon

XP_048786262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32379-32943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33260-33642:1:exon

LOC125686386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125686386 isoform X3
translation: MGGRNQIGEEWRGGEKWGGLYGVCGVHGGLWGCMGCMGLNGAVWRLMGLYGGLWAAWVVWGLYGGLWVCMEVYGLHGGLWGCMGLYGGLWGCMEVYGGCMEVYGVYGCVGLNGAVWRLMGCMEVYGVVWRLMGCMEVYGVVWRFMGCMEVYGAVWMFMGLYGAIWGCMGLYGAVWRLMGLYGMCGVHGGLWGCMEAYGVYGAVWAVWGCMEVYGAVWGCMELYGAVWRFMGLYGVVWSCMGLYGVVWRFMGLYGGLWGCMEAYGVYGAVWAVWGCMELYGGLWGCMEVYGAVWGVWGCMGLYGAVWGCMEAYGVYGMCGAVCVHVGTERGQCKDN
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32379..33121,33338..33602)
location: region:32379-33602:1
so has part: feature:32379-33121:1:exon
so has part: feature:33338-33602:1:exon

XP_048786260.1
type: Protein
SIO_000068: ncbiprotein

position:33602:1
position: 33602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32379-33121:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33338-33602:1:exon

LOC125686386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125686386 isoform X2
translation: MGGRNQIGEEWRGGEKWGGLYGVCGVHGGLWGCMGCMGLNGAVWRLMGLYGGLWAAWVVWGLYGGLWVCMEVYGLHGGLWGCMGLYGGLWGCMEVYGGCMEVYGVYGCVGLNGAVWRLMGCMEVYGVVWRLMGCMEVYGVVWRFMGCMEVYGAVWMFMGLYGAIWGCMGLYGAVWRLMGLYGMCGVHGGLWGCMEAYGVYGAVWAVWGCMEVYGAVWGCMELYGAVWRFMGLYGGLWGVWGCMGCMGLYGAVWRFMGLYGGLWGCMEAYGVYGAVWAVWGCMELYGGLWGCMEVYGAVWGVWGCMGLYGAVWGCMEAYGVYGMCGAVCVHVGTERGQCKDN
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32379..33061,33260..33602)
location: region:32379-33602:1
so has part: feature:32379-33061:1:exon
so has part: feature:33260-33602:1:exon

XP_048786259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32379-33061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33260-33602:1:exon

LOC125686386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: shematrin-like protein 2 isoform X4
translation: MEGGREVGGAVWGVWGAWRLMGLHGVYGAEWGCMEAYGVVWRFMGCMGCMGAVWRFMGLYGGLWAAWRFMGLYGAVWRFMGLYGGLWGLYGGLWGLWVCGAEWGCMEAYGVHGGLWGCMEAYGVHGGLWGCMEVYGVHGGLWGCMDVYGAVWGYMGLYGAVWSCMEAYGAVWDVWGAWRFMGLYGGLWGVWGCMGCMGLYGGLWGCMEAYGVYGAVWAVWGCMELYGGLWGCMEVYGAVWRLMGCMGLYGLYGAVWSCMEVYGAVWRFMGLYGVCGAVWGCMELYGVVWRLMGFMGCVGLFAFMWVRKGGNARITEGQNVLNNPEDIK
SIO_010081: LOC125686386
subclass of: SO_0000673
so part of: LOC125686386
location: join(32408..33011,33260..33642)
location: region:32408-33642:1
so has part: feature:32408-33011:1:exon
so has part: feature:33260-33642:1:exon

XP_048786261.1
type: Protein
SIO_000068: ncbiprotein

position:32408:1
position: 32408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32408-33011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33260-33642:1:exon

LOC125686385
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: LOC125686385
note: testis-expressed protein 13D-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(37170..41360)
location: region:37170-41360:-1
so has part: feature:37170-41360:-1:exon
subclass of: SO_0000010

125686385
type: Gene
SIO_000068: ncbigene

position:37170:-1
position: 37170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41360:-1
position: 41360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37170-41360:-1:exon

LOC125686385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686385
product: testis-expressed protein 13D-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_048930297.1
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37170..38361,40006..41360))
location: region:37170-41360:-1
so has part: feature:40006-41360:-1:exon
so has part: feature:37170-38361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40006-41360:-1:exon

position:40006:-1
position: 40006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37170-38361:-1:exon

position:38361:-1
position: 38361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125686385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686385
product: testis-expressed protein 13D-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_048930296.1
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37170..38341,38969..39183,39919..41360))
location: region:37170-41360:-1
so has part: feature:39919-41360:-1:exon
so has part: feature:38969-39183:-1:exon
so has part: feature:37170-38341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39919-41360:-1:exon

position:39919:-1
position: 39919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38969-39183:-1:exon

position:38969:-1
position: 38969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39183:-1
position: 39183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37170-38341:-1:exon

position:38341:-1
position: 38341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125686385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686385
product: testis-expressed protein 13D-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_048930292.1
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37170..39183,39919..41360))
location: region:37170-41360:-1
so has part: feature:39919-41360:-1:exon
so has part: feature:37170-39183:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39919-41360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37170-39183:-1:exon

LOC125686385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686385
product: testis-expressed protein 13D-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_048930294.1
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37170..39113,39850..41360))
location: region:37170-41360:-1
so has part: feature:39850-41360:-1:exon
so has part: feature:37170-39113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39850-41360:-1:exon

position:39850:-1
position: 39850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37170-39113:-1:exon

position:39113:-1
position: 39113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125686385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686385
product: testis-expressed protein 13D-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_048930293.1
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37176..38321,38381..39183,39919..41360))
location: region:37176-41360:-1
so has part: feature:39919-41360:-1:exon
so has part: feature:38381-39183:-1:exon
so has part: feature:37176-38321:-1:exon

position:37176:-1
position: 37176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39919-41360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38381-39183:-1:exon

position:38381:-1
position: 38381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37176-38321:-1:exon

position:38321:-1
position: 38321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC125686385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686385
product: testis-expressed protein 13D-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_048930299.1
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37179..38341,38969..39113,39850..41360))
location: region:37179-41360:-1
so has part: feature:39850-41360:-1:exon
so has part: feature:38969-39113:-1:exon
so has part: feature:37179-38341:-1:exon

position:37179:-1
position: 37179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39850-41360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38969-39113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37179-38341:-1:exon

LOC125686385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686385
product: testis-expressed protein 13D-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_048930295.1
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37186..38341,38969..41360))
location: region:37186-41360:-1
so has part: feature:38969-41360:-1:exon
so has part: feature:37186-38341:-1:exon

position:37186:-1
position: 37186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38969-41360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37186-38341:-1:exon

LOC125686385
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686385
product: testis-expressed protein 13D-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_048930298.1
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37193..38341,39705..41360))
location: region:37193-41360:-1
so has part: feature:39705-41360:-1:exon
so has part: feature:37193-38341:-1:exon

position:37193:-1
position: 37193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39705-41360:-1:exon

position:39705:-1
position: 39705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37193-38341:-1:exon

LOC125686385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscle M-line assembly protein unc-89-like isoform X6
translation: MATKGPKWPQRVQNGHKGPQNGHKGSKMATKGHKMAARGSQRAPNGHKGLKMATKASKWPQRAQNGPQRHNKGPERVTKWLPEGHKGPQVPQRPQNGQKRSENGQKRSENGHQGQEMATKGPKMATKGPKWPQRVQNGRQRVTKAPEWPQRPQNGHQGQKMATKGPKWPQRPQNGHKGSQNGHKGSKMATKGPKWLPEGQKGSQNGHQRLTKVRKWPQRAQNGHQVSKMATKVRKWPQRAQNGCQRAQNGHKGSKMATKGPKIATKGPKKGPERVTKWLPEGHKGPQMATKGPKWPQRPQNGHKGSKMATEGPKWPPRVQNGHQGSKNGHSGSKMALKGTIKGPGRVTKWPPEGHKGPQMATKAPKWPETVRKWPQRVKNGCQRVTKWPPEGHKGPQMATKASKWPPRSENGHQGQKMATKV
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37749..38361,40006..40661))
location: region:37749-40661:-1
so has part: feature:40006-40661:-1:exon
so has part: feature:37749-38361:-1:exon

XP_048786254.1
type: Protein
SIO_000068: ncbiprotein

position:37749:-1
position: 37749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40661:-1
position: 40661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40006-40661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37749-38361:-1:exon

LOC125686385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 13D-like isoform X5
translation: MATKGPKWPQRVQNGHKGPQNGHKGSKMATKGHKMAARGSQRAPNGHKGLKMATKASKWPQRAQNGPQRHNKGPERVTKWLPEGHKGPQVPQRPQNGQKRSENGQKRSENGHQGQEMATKGPKMATKGPKWPQRVQNGRQRVTKAPEWPQRPQNGHQGQKMATKGPKWPQRPQNGHKGSQNGHKGSKMATKGPKWLPEGQKGSQNGHQRLTKVRKWPQRSENGHKGSKVAPKGPQKSARKGHKMAARRSQRPTNGPKRPQNGHQGSKMATKVRKWPQRAQNGCQRAQKWLPEGQKGSQNGRQRLTKVRKWPQRAQNGHKVSKMATKVRKWPQRAQNGCQRAQNGHKGSKMATKGPKIATKGPKKGPERVTKWLPEGHKGPQMATKGPKWPQRPQNGHKGSKMATEGPKWPPRVQNGHQGSKNGHSGSKMALKGTIKGPGRVTKWPPEGHKGPQMATKAPKWPETVRKWPQRVKNGCQRVTKWPPEGHKGPQMATKASKWPPRSENGHQGQKMATKV
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37749..38341,38969..39183,39919..40661))
location: region:37749-40661:-1
so has part: feature:39919-40661:-1:exon
so has part: feature:38969-39183:-1:exon
so has part: feature:37749-38341:-1:exon

XP_048786253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39919-40661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38969-39183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37749-38341:-1:exon

LOC125686385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125686385 isoform X1
translation: MATKGPKWPQRVQNGHKGPQNGHKGSKMATKGHKMAARGSQRAPNGHKGLKMATKASKWPQRAQNGPQRHNKGPERVTKWLPEGHKGPQVPQRPQNGQKRSENGQKRSENGHQGQEMATKGPKMATKGPKWPQRVQNGRQRVTKAPEWPQRPQNGHQGQKMATKGPKWPQRPQNGHKGSQNGHKGSKMATKGPKWLPEGQKGSQNGHQRLTKVRKWPQRSENGHKGSKVAPKGPQKSARKGHKMAARRSQRPTNGPKRPQNGHQGSKMATKVRKWPQRAQNGCQRAQKWLPEGQKGSQNGRQRLTKVRKWPQRAQNGHKGLKMATKGPKIATKGPKKGPERVTKWLPEGHKGPPNGHKGSKMAPKASKWPQRPPNGHRGPQMATKGPKWPPRVQKWPQWVQNGPQRHNKWARKGHKMAARGSQRPTNGHKGPKMATKVRKWPQRSENGHQGPQMATKGPKWPQRVQNGHKRSENGHKGPKMAARGPERVTKWPPEAHKGQKMATKAPKWPPEGHKGQKWPQRAQNGHQVSKMATKVRKWPQRAQNGCQRAQNGHKGSKMATKGPKIATKGPKKGPERVTKWLPEGHKGPQMATKGPKWPQRPQNGHKGSKMATEGPKWPPRVQNGHQGSKNGHSGSKMALKGTIKGPGRVTKWPPEGHKGPQMATKAPKWPETVRKWPQRVKNGCQRVTKWPPEGHKGPQMATKASKWPPRSENGHQGQKMATKV
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37749..39183,39919..40661))
location: region:37749-40661:-1
so has part: feature:39919-40661:-1:exon
so has part: feature:37749-39183:-1:exon

XP_048786249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39919-40661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37749-39183:-1:exon

LOC125686385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125686385 isoform X3
translation: MAARGSQRPPSAPKASKWPETVRKWPETVRKWPPRSGNGHKGPKNGHKGSKMATKGPKWPPEGHKGPRMAPKAPKWPPRSENGHKGPQMATKAPKWPQRVTKWPQRVQNGHKGPKMAARGPERVTKWPPEAHKGQKMATKVRKWPQRLQSGPKRAPKKRQKGSQNGRQKVTKARKWPQRPQNGHQGSKMATKVRKWPQRAQNGCQRAQKWLPEGQKGSQNGRQRLTKVRKWPQRAQNGHKGLKMATKGPKIATKGPKKGPERVTKWLPEGHKGPPNGHKGSKMAPKASKWPQRPPNGHRGPQMATKGPKWPPRVQKWPQWVQNGPQRHNKWARKGHKMAARGSQRPTNGHKGPKMATKVRKWPQRSENGHQGPQMATKGPKWPQRVQNGHKRSENGHKGPKMAARGPERVTKWPPEAHKGQKMATKAPKWPPEGHKGQKWPQRAQNGHQVSKMATKVRKWPQRAQNGCQRAQNGHKGSKMATKGPKIATKGPKKGPERVTKWLPEGHKGPQMATKGPKWPQRPQNGHKGSKMATEGPKWPPRVQNGHQGSKNGHSGSKMALKGTIKGPGRVTKWPPEGHKGPQMATKAPKWPETVRKWPQRVKNGCQRVTKWPPEGHKGPQMATKASKWPPRSENGHQGQKMATKV
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37749..39113,39850..40425))
location: region:37749-40425:-1
so has part: feature:39850-40425:-1:exon
so has part: feature:37749-39113:-1:exon

XP_048786251.1
type: Protein
SIO_000068: ncbiprotein

position:40425:-1
position: 40425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39850-40425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37749-39113:-1:exon

LOC125686385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125686385 isoform X2
translation: MATKGPKWPQRVQNGHKGPQNGHKGSKMATKGHKMAARGSQRAPNGHKGLKMATKASKWPQRAQNGPQRHNKGPERVTKWLPEGHKGPQVPQRPQNGQKRSENGQKRSENGHQGQEMATKGPKMATKGPKWPQRVQNGRQRVTKAPEWPQRPQNGHQGQKMATKGPKWPQRPQNGHKGSQNGHKGSKMATKGPKWLPEGQKGSQNGHQRLTKVRKWPQRSENGHKGSKVAPKGPQKSARKGHKMAARRSQRPTNGPKRPQNGHQGSKMATKVRKWPQRAQNGCQRAQKWLPEGQKGSQNGRQRLTKVRKWPQRAQNGHKGLKMATKGPKIATKGPKKGPERVTKWLPEGHKGPPNGHKGSKMAPKASKWPQRPPNGHRGPQMATKGPKWPPRVQKWPQWVQNGPQRHNKWARKGHKMAARGSQRPTNGHKGPKMATKVRKWPQRSENGHQGPQMATKGPKWPQRVQNGHKRSENGHKGPKMAARGPERVTKWPPEAHKGQKMATKAPKWPPEGHKGQKMATKGPKWLPKGPKWPQRVQNGHKGSKNSHKGPQKRARKGHKMAARGSQRPPNGHKGSKMAPKASKWPQRVQNGHRGPQMATKGPKWPPRVQKWPQWVQNGPQRHNKRARKGHKMAARGSQRPTNGHKGPKMARNGQKMATKGQKWLPKGH
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(37858..38321,38381..39183,39919..40661))
location: region:37858-40661:-1
so has part: feature:39919-40661:-1:exon
so has part: feature:38381-39183:-1:exon
so has part: feature:37858-38321:-1:exon

XP_048786250.1
type: Protein
SIO_000068: ncbiprotein

position:37858:-1
position: 37858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39919-40661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38381-39183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37858-38321:-1:exon

LOC125686385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscle M-line assembly protein unc-89-like isoform X8
translation: MATKGPKWPQRVQNGHKGPQNGHKGSKMATKGHKMAARGSQRAPNGHKGLKMATKASKWPQRAQNGPQRHNKGPERVTKWLPEGHKGPQVPQRPQNGQKRSENGQKRSENGHQGQEMATKGPKMATKGPKWPQRVQNGRQRVTKAPEWPQRPQNGHQGQKMATKGPKWPQRPQNGHKGSQNGHKGSKMATKGPKWLPEGQKGSQNGHQRLTKVRKWPQRSENGHKGSKVAPKGPQKSARKGHKMAARRSQRPANGPKGLKMATKGPKWPRRSENGHKGPKMAAKGPKNGCQRARKGHKMAARGSQRSENGHKGPKMATKCPKWPQRSENGHKGPKMAAKGPKMATKGPKWPQRVQK
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(38228..38341,38969..39113,39850..40661))
location: region:38228-40661:-1
so has part: feature:39850-40661:-1:exon
so has part: feature:38969-39113:-1:exon
so has part: feature:38228-38341:-1:exon

XP_048786256.1
type: Protein
SIO_000068: ncbiprotein

position:38228:-1
position: 38228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39850-40661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38969-39113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38228-38341:-1:exon

LOC125686385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: muscle M-line assembly protein unc-89-like isoform X7
translation: MATKGPKWPQRVQNGHKGPQNGHKGSKMATKGHKMAARGSQRAPNGHKGLKMATKASKWPQRAQNGPQRHNKGPERVTKWLPEGHKGPQVPQRPQNGQKRSENGQKRSENGHQGQEMATKGPKMATKGPKWPQRVQNGRQRVTKAPEWPQRPQNGHQGQKMATKGPKWPQRPQNGHKGSQNGHKGSKMATKGPKWLPEGQKGSQNGHQRLTKVRKWPQRSENGHKGSKVAPKGPQKSARKGHKMAARRSQRPANGPKGLKMATKGPKWPRRSENGHKGPKMAAKGPKNCCQRARKGHKMAARGSQRSENGHKGPKMATKCPKWPQRSENGHKGPKMAAKGPKMATKGPKWPQRVQK
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(38228..38341,39705..40661))
location: region:38228-40661:-1
so has part: feature:39705-40661:-1:exon
so has part: feature:38228-38341:-1:exon

XP_048786255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39705-40661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38228-38341:-1:exon

LOC125686385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686385
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cylicin-2-like isoform X4
translation: MAPKGTIKGQKGSQNGCQRVTKAPKCPKGLKMARNGQKMARNGQKMATKVRKWPQRAQKWPQRVQNGHKGSKMAARGSQRPQNGPKGPKMATKVRKWPQRAPNGHKGPKMATKGHKMATKGPKWPQRAQNGCQRARKGHKMATRGSQRSENGHKGQKMATKAPKWPQKGPKKAPERVTKWPPEGHKGPQMAPKASKWPPRVQNGHEGQKMATKGPKWLPKGPKIAARGPERVTKWPPEAHKGQKMATKGPKWPQRSENGHKGPKNSHKGPQKGARKGHKMAARGSQRPPNGHKGSKMAPKASKWPQRPPNGHRGPQMATKGPKWPQWVQNGPQRHNKRARKGHKMAARGSQRPQNGHKGPKMATKVRKWPQRAPNGHKGPKMATKGPKWPQRAQNGHKRSENGHQRVQSGPQRAPKKGQKGSQKWPPEGHKGPQMAPKGLKMATKGPKWPQRSENGHKGPKMAAKGPKNGCQRARKGHKMAARGSQRSENGHKGPKMATKCPKWPQRSENGHKGPKMAAKGPKMATKGPKWPQRVQK
SIO_010081: LOC125686385
subclass of: SO_0000673
so part of: LOC125686385
location: complement(join(38228..38341,38969..40468))
location: region:38228-40468:-1
so has part: feature:38969-40468:-1:exon
so has part: feature:38228-38341:-1:exon

XP_048786252.1
type: Protein
SIO_000068: ncbiprotein

position:40468:-1
position: 40468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38969-40468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38228-38341:-1:exon

LOC125686388
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: LOC125686388
note: uncharacterized LOC125686388; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 43120..44498
location: region:43120-44498:1
so has part: feature:43120-44498:1:exon
subclass of: SO_0000011

125686388
type: Gene
SIO_000068: ncbigene

position:43120:1
position: 43120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44498:1
position: 44498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43120-44498:1:exon

LOC125686388
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 64668
nc RNA class: lncRNA
gene: LOC125686388
product: uncharacterized LOC125686388, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007373784.1
SIO_010081: LOC125686388
subclass of: SO_0000673
so part of: LOC125686388
location: join(43120..43176,43248..44292,44371..44498)
location: region:43120-44498:1
so has part: feature:43120-43176:1:exon
so has part: feature:43248-44292:1:exon
so has part: feature:44371-44498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43120-43176:1:exon

position:43176:1
position: 43176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43248-44292:1:exon

position:43248:1
position: 43248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44292:1
position: 44292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44371-44498:1:exon

position:44371:1
position: 44371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125686388
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 64668
nc RNA class: lncRNA
gene: LOC125686388
product: uncharacterized LOC125686388, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_007373783.1
SIO_010081: LOC125686388
subclass of: SO_0000673
so part of: LOC125686388
location: join(43120..43176,43248..43494,43795..44498)
location: region:43120-44498:1
so has part: feature:43120-43176:1:exon
so has part: feature:43248-43494:1:exon
so has part: feature:43795-44498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43120-43176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43248-43494:1:exon

position:43494:1
position: 43494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:43795-44498:1:exon

position:43795:1
position: 43795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition