Lagopus muta isolate bLagMut1 chromosome 37, bLagMut1 primary, whole genome shotgun sequence.
type: Entry
definition: Lagopus muta isolate bLagMut1 chromosome 37, bLagMut1 primary, whole genome shotgun sequence.
sequence version: NC_064469.1
sequence date: 2022-07-07
sequence: sequence
division: CON
label: NC_064469.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA853367
dblink: SAMN25144835
keyword: WGS
keyword: RefSeq
source: Lagopus muta (rock ptarmigan)
organism: Lagopus muta
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM041512.1.\nAssembly name: bLagMut1 primary\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/05/12. The original whole-genome shotgun project has the\naccession JAMCCT000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 17-JUL-2021\nAssembly Method :: Minimap2 v. 0.15.1-r334; purge_dups v.\n 1.2.5; salsa v. 2.3\nAssembly Name :: bLagMut1 primary\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 57.75x\nSequencing Technology :: PacBio Sequel II HiFi; Dovetail genomics\n Hi-C; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: Lagopus muta Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 102085
topology: linear
so has quality: SO_0000987
location: 1..102085
location: region:1-102085:1
RO_0002162: 64668

NC_064469
type: RefSeq
SIO_000068: refseq

PRJNA853367
type: BioProject
SIO_000068: bioproject

SAMN25144835
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102085:1
position: 102085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-102085:1:source
so part of: sequence
organism: Lagopus muta
mol type: genomic DNA
isolate: bLagMut1
chromosome: 37
sex: female
tissue type: blood
dev stage: adult
country: Iceland: Husavik, NE
lat lon: 66.088900 N 17.264700 W
collected by: Kristinn P. Magnusson

64668
type: Taxonomy
SIO_000068: taxonomy

ZC3H4
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: ZC3H4
note: zinc finger CCCH-type containing 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1052..21858
location: region:1052-21858:1
so has part: feature:1052-21858:1:exon
subclass of: SO_0000010

125686373
type: Gene
SIO_000068: ncbigene

position:1052:1
position: 1052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21858:1
position: 21858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052-21858:1:exon

ZC3H4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: ZC3H4
product: zinc finger CCCH-type containing 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_048930278.1
SIO_010081: ZC3H4
subclass of: SO_0000673
so part of: ZC3H4
location: join(1052..2005,9884..10097,10845..10959,11743..11962,12318..12460,13494..13605,13683..13804,14372..14482,15875..15986,16431..16540,16633..16961,17554..17959,18983..19216,19992..21858)
location: region:1052-21858:1
so has part: feature:1052-2005:1:exon
so has part: feature:9884-10097:1:exon
so has part: feature:10845-10959:1:exon
so has part: feature:11743-11962:1:exon
so has part: feature:12318-12460:1:exon
so has part: feature:13494-13605:1:exon
so has part: feature:13683-13804:1:exon
so has part: feature:14372-14482:1:exon
so has part: feature:15875-15986:1:exon
so has part: feature:16431-16540:1:exon
so has part: feature:16633-16961:1:exon
so has part: feature:17554-17959:1:exon
so has part: feature:18983-19216:1:exon
so has part: feature:19992-21858:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052-2005:1:exon

position:2005:1
position: 2005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9884-10097:1:exon

position:9884:1
position: 9884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10097:1
position: 10097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10845-10959:1:exon

position:10845:1
position: 10845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10959:1
position: 10959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11743-11962:1:exon

position:11743:1
position: 11743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11962:1
position: 11962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12318-12460:1:exon

position:12318:1
position: 12318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12460:1
position: 12460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13494-13605:1:exon

position:13494:1
position: 13494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13605:1
position: 13605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13683-13804:1:exon

position:13683:1
position: 13683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13804:1
position: 13804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14372-14482:1:exon

position:14372:1
position: 14372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14482:1
position: 14482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15875-15986:1:exon

position:15875:1
position: 15875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15986:1
position: 15986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16431-16540:1:exon

position:16431:1
position: 16431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16540:1
position: 16540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:16633-16961:1:exon

position:16633:1
position: 16633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16961:1
position: 16961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:17554-17959:1:exon

position:17554:1
position: 17554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17959:1
position: 17959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:18983-19216:1:exon

position:18983:1
position: 18983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19216:1
position: 19216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:19992-21858:1:exon

position:19992:1
position: 19992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZC3H4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: ZC3H4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 4
translation: MPPGPPSPSSFSTISLSAAAAVLLRTLGTLRHLSVCSGTLRLPPLTPRNFPLPLGTFRYSPRARASEFSVISLVPSGTIRLSSLPLGTFRQPSLCLGTFRYSSAPPAPPFGFLRPYFSSVRLSPPFLRFSPPLFQFRSSLHPNFGFLRPHFGFLRPSPVPFLPHFGILRPPFVSLRPDFVNPRPPFVLFRLRSALPAPPQGAAGRHFVRASRGGGGQPQRRTVTVAPPTRPPSPSPFSSPPSISVNSPPPMAVENPSVPPAAAASPPSPHAAPPPPEGGGCSLPRAPPLHVQHGPDEREDGELEEGELEDDGAEETPEPRPTRSRREKGERHGSDSDGERSHRRGKRKRRKEREKEKRRAKKKRKSKHKRHASSSDDFSDDSDDSDFSPGEKGGHRRYRDYSPPYIPPHQPYSSHNAPMQKKPYSKMEPKGYGSYEDYEAEEYGRYEGEEDEDGPKDDYDDFAKELNQYRRAKEGSHRGRGGRGRGRGFRGRGRGCMRGGRGMGRGNRGRGRGDHMEDEEEMYEEEMEYGDPEDPGGPDDDYEDYSSKEPGQYRRNKDGRGRGEPRGRGRGPRGRGNKGMGRGRGRGRMAKGNAMNDDDDYYDEDMDGGGGNYRRGDHDKTHPPADKKGKVICKYFVEGRCTWGEHCNFSHDIELPKKRELCKFYITGYCARAENCPYMHGDFPCKLFHTTGNCINGDDCMFSHAPLTEETRELLDKMLQDDAEAGAEDEKEVEELKKQGINPLPKPPPGVGLLPTPPRPPAPPSPNGRAMPGGPPVPPMPPPGPQMPPPMHEPLSPQQQEMYKKIPSLFEIVVRPTGQLAEKLGVRHPGPPPPRFPGPGGPPGPMGGPMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMHPDMPMGPGPPMMPYSPEGSPHGALLPPGAGPPQGYYDGFYDPPPEGMEMEHGAMGPADPYAPYEDMEGPPPGSHLYPDPPPRARPRGSPPXVPDFLPSAQRALFLRIRHKQREEEERARRLAEGGRPERDPKEGDAALWYSSDEDEGGSVSSILRTLRQQSGALGPPHPSMGPPPGSMGPPHTADPRLQKAAASGGGGRPADPRLRDPRLARHNKTEPPHPKTEDYPKTDPNYPKTETDYPKMEADYPKMDPHNPKTDPSHPKTDSLPKSRLPDEEDDADPERSLRDRPVVIPLEPPPGQPPRDPRCHRHRFVPAPRDVALTKPAFARMVLWSPEDLLPLPIPVQDVTVTPGGDPRLHRADPRHRALPTDPGVTTEPSSKLPDFELLSRILQTVSAGGGDRTGDATGDKQPGDKTTGPGDAFPAPADKPAGAGDKPADKPGGTERPSDPRVRKPLSDPRLQKAAAKAPELGESGDDAGDAAGDAGTPLAPYDPRLSRGAAQSRVLSAISLYDPRAPPAGDGVGGRGKDQPYSRRSPLAEPAQDRYNSYNRPRPRGTAGNSGNSAAPEGTEQDETDSTASLKDVFKGFDPTASPFGQ
SIO_010081: ZC3H4
subclass of: SO_0000673
so part of: ZC3H4
location: join(1113..2005,9884..10097,10845..10959,11743..11962,12318..12460,13494..13605,13683..13804,14372..14482,15875..15986,16431..16540,16633..16961,17554..17959,18983..19216,19992..21383)
location: region:1113-21383:1
so has part: feature:1113-2005:1:exon
so has part: feature:9884-10097:1:exon
so has part: feature:10845-10959:1:exon
so has part: feature:11743-11962:1:exon
so has part: feature:12318-12460:1:exon
so has part: feature:13494-13605:1:exon
so has part: feature:13683-13804:1:exon
so has part: feature:14372-14482:1:exon
so has part: feature:15875-15986:1:exon
so has part: feature:16431-16540:1:exon
so has part: feature:16633-16961:1:exon
so has part: feature:17554-17959:1:exon
so has part: feature:18983-19216:1:exon
so has part: feature:19992-21383:1:exon

XP_048786235.1
type: Protein
SIO_000068: ncbiprotein

position:1113:1
position: 1113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21383:1
position: 21383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113-2005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9884-10097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10845-10959:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11743-11962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12318-12460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13494-13605:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13683-13804:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14372-14482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15875-15986:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16431-16540:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16633-16961:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17554-17959:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:18983-19216:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:19992-21383:1:exon

LOC125686381
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: LOC125686381
note: uncharacterized LOC125686381; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 23847..28737
location: region:23847-28737:1
so has part: feature:23847-28737:1:exon
subclass of: SO_0000010

125686381
type: Gene
SIO_000068: ncbigene

position:23847:1
position: 23847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28737:1
position: 28737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23847-28737:1:exon

LOC125686381
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LOC125686381
product: uncharacterized LOC125686381
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930287.1
SIO_010081: LOC125686381
subclass of: SO_0000673
so part of: LOC125686381
location: join(23847..24135,24750..24806,25538..25702,27476..27502,27582..28737)
location: region:23847-28737:1
so has part: feature:23847-24135:1:exon
so has part: feature:24750-24806:1:exon
so has part: feature:25538-25702:1:exon
so has part: feature:27476-27502:1:exon
so has part: feature:27582-28737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23847-24135:1:exon

position:24135:1
position: 24135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:24750-24806:1:exon

position:24750:1
position: 24750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24806:1
position: 24806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25538-25702:1:exon

position:25538:1
position: 25538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25702:1
position: 25702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27476-27502:1:exon

position:27476:1
position: 27476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27502:1
position: 27502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27582-28737:1:exon

position:27582:1
position: 27582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC125686381
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LOC125686381
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC125686381
translation: MQTKGAWPMSLFAPPGMEGVWLLTWLRTCVRSSGGASSRSSDVIWAMAAGPVLALLLLLPAGGGGVPGGPGSDAPSKAPPPDVTAPWDSAYQDHCVAPPLTGPCRAAFQRWFHSPEHRDCRPFIYGGCRGNRNNYRNREECLQRCRSGDSSSWHPTALLLALLLVVTLALAVLVVTRCGITQFWGRRSHSIDKETLMGSTDA
SIO_010081: LOC125686381
subclass of: SO_0000673
so part of: LOC125686381
location: join(23916..24135,24750..24806,25538..25702,27476..27502,27582..27721)
location: region:23916-27721:1
so has part: feature:23916-24135:1:exon
so has part: feature:24750-24806:1:exon
so has part: feature:25538-25702:1:exon
so has part: feature:27476-27502:1:exon
so has part: feature:27582-27721:1:exon

XP_048786244.1
type: Protein
SIO_000068: ncbiprotein

position:23916:1
position: 23916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27721:1
position: 27721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23916-24135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:24750-24806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25538-25702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27476-27502:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27582-27721:1:exon

DLL3
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: DLL3
note: delta like canonical Notch ligand 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(30430..33734)
location: region:30430-33734:-1
so has part: feature:30430-33734:-1:exon
subclass of: SO_0000010

125686378
type: Gene
SIO_000068: ncbigene

position:30430:-1
position: 30430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33734:-1
position: 33734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30430-33734:-1:exon

DLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: DLL3
product: delta like canonical Notch ligand 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_048930286.1
SIO_010081: DLL3
subclass of: SO_0000673
so part of: DLL3
location: complement(join(30430..31009,31080..31531,31608..31880,31973..32028,32098..32341,32726..32783,32912..33734))
location: region:30430-33734:-1
so has part: feature:32912-33734:-1:exon
so has part: feature:32726-32783:-1:exon
so has part: feature:32098-32341:-1:exon
so has part: feature:31973-32028:-1:exon
so has part: feature:31608-31880:-1:exon
so has part: feature:31080-31531:-1:exon
so has part: feature:30430-31009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32912-33734:-1:exon

position:32912:-1
position: 32912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32726-32783:-1:exon

position:32726:-1
position: 32726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32783:-1
position: 32783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:32098-32341:-1:exon

position:32098:-1
position: 32098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32341:-1
position: 32341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31973-32028:-1:exon

position:31973:-1
position: 31973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32028:-1
position: 32028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:31608-31880:-1:exon

position:31608:-1
position: 31608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31880:-1
position: 31880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:31080-31531:-1:exon

position:31080:-1
position: 31080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31531:-1
position: 31531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:30430-31009:-1:exon

position:31009:-1
position: 31009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: DLL3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: delta-like protein 3
translation: MAVGGIPRASFRRVLACKQGLWGAVGNWKEKGGIGDPDAHLQVQLAGVLELRVLSAWGGPCRGPPSCRLVFRLCLRPSMGIGCSLGAAQSPPGPPPTPGAPRILRLPFAFPWPGTVSLIIESWRLEEAKGPGGPQSRLLGRAVAQQRLVPGGPWQGGAGGGLRFSTRLRCRLPARGPRCLPPCSPCIRRCLPYSAACRVPPRRRCRPLCCAHREAVGADGRGCTLSSANSTVRATLAGLRCDPPGPIWPPSPKAPETAEKIPVPDPLPEASPSPCALGPCFNGGACAPAPNSGAGYSCRCPPGFHGSNCERRADRCANRLCLHGGHCLDLGHSVICKCQPGFSGARCENNVDDCSPNPCANGGTCVDGTNSFSCSCTLGYAGDDCRQRADACASGPCLHGATCYTHFSGHVCACPPGYMGPRCEEEVGGGPAAPYRRPPAPLALACALPIALLGPGLGLVLAARGWRRRPGGESGRTLEPMRAPSLSLPGLEQQLPRASATQVGSEQERGAAVQAQHLALLRSPFPGLR
SIO_010081: DLL3
subclass of: SO_0000673
so part of: DLL3
location: complement(join(30841..31009,31080..31531,31608..31880,31973..32028,32098..32341,32726..32783,32912..33250))
location: region:30841-33250:-1
so has part: feature:32912-33250:-1:exon
so has part: feature:32726-32783:-1:exon
so has part: feature:32098-32341:-1:exon
so has part: feature:31973-32028:-1:exon
so has part: feature:31608-31880:-1:exon
so has part: feature:31080-31531:-1:exon
so has part: feature:30841-31009:-1:exon

XP_048786243.1
type: Protein
SIO_000068: ncbiprotein

position:30841:-1
position: 30841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33250:-1
position: 33250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32912-33250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32726-32783:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32098-32341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31973-32028:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31608-31880:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:31080-31531:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:30841-31009:-1:exon

TIMM50
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: TIMM50
note: translocase of inner mitochondrial membrane 50; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(33833..37719)
location: region:33833-37719:-1
so has part: feature:33833-37719:-1:exon
subclass of: SO_0000010

125686377
type: Gene
SIO_000068: ncbigene

position:33833:-1
position: 33833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37719:-1
position: 37719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33833-37719:-1:exon

TIMM50
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: TIMM50
product: translocase of inner mitochondrial membrane 50
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930285.1
SIO_010081: TIMM50
subclass of: SO_0000673
so part of: TIMM50
location: complement(join(33833..34102,34202..34308,34397..34553,34652..34750,34833..34937,35024..35143,35392..35450,35708..35729,37185..37216,37301..37451,37533..37719))
location: region:33833-37719:-1
so has part: feature:37533-37719:-1:exon
so has part: feature:37301-37451:-1:exon
so has part: feature:37185-37216:-1:exon
so has part: feature:35708-35729:-1:exon
so has part: feature:35392-35450:-1:exon
so has part: feature:35024-35143:-1:exon
so has part: feature:34833-34937:-1:exon
so has part: feature:34652-34750:-1:exon
so has part: feature:34397-34553:-1:exon
so has part: feature:34202-34308:-1:exon
so has part: feature:33833-34102:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37533-37719:-1:exon

position:37533:-1
position: 37533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:37301-37451:-1:exon

position:37301:-1
position: 37301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37451:-1
position: 37451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37185-37216:-1:exon

position:37185:-1
position: 37185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37216:-1
position: 37216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35708-35729:-1:exon

position:35708:-1
position: 35708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35729:-1
position: 35729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:35392-35450:-1:exon

position:35392:-1
position: 35392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35450:-1
position: 35450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:35024-35143:-1:exon

position:35024:-1
position: 35024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35143:-1
position: 35143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:34833-34937:-1:exon

position:34833:-1
position: 34833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34937:-1
position: 34937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:34652-34750:-1:exon

position:34652:-1
position: 34652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34750:-1
position: 34750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:34397-34553:-1:exon

position:34397:-1
position: 34397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34553:-1
position: 34553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:34202-34308:-1:exon

position:34202:-1
position: 34202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34308:-1
position: 34308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:33833-34102:-1:exon

position:34102:-1
position: 34102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM50
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: TIMM50
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit TIM50
translation: MAATAAARGARIALAAHRALAALSRAVSSSGAGTSGTEAVLQERLRQQQAGLEGTPGRPNPGNEEEEQRRKQRLAAVRRLALRLAGLLGAGTGITIIYIFGSNAVDEHGAKVPDEFDGDPVGIQQLRRTYKYFKDYRQMIIEPTSAKLLPDPLREPYYQPPYTLVIELTDVLLHPEWSLITGWRFKKRPGIDSLLQQLAPLYEIVIFTSETGMTAFPLIDSIDPHGFISYRLFRDATRYMDGHHVKDISCLNRDPAKVVVVDCRKEAFCLQPYNGLALRRWDGSSDDRALYDLTAFLKTIALSGVEDVRSVLENYALEDDPLAAFKRRRSQLEEEEQQRLAEMAQGKKPTGLFLGALAGRLWARSKQQ
SIO_010081: TIMM50
subclass of: SO_0000673
so part of: TIMM50
location: complement(join(33998..34102,34202..34308,34397..34553,34652..34750,34833..34937,35024..35143,35392..35450,35708..35729,37185..37216,37301..37451,37533..37682))
location: region:33998-37682:-1
so has part: feature:37533-37682:-1:exon
so has part: feature:37301-37451:-1:exon
so has part: feature:37185-37216:-1:exon
so has part: feature:35708-35729:-1:exon
so has part: feature:35392-35450:-1:exon
so has part: feature:35024-35143:-1:exon
so has part: feature:34833-34937:-1:exon
so has part: feature:34652-34750:-1:exon
so has part: feature:34397-34553:-1:exon
so has part: feature:34202-34308:-1:exon
so has part: feature:33998-34102:-1:exon

XP_048786242.1
type: Protein
SIO_000068: ncbiprotein

position:33998:-1
position: 33998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37682:-1
position: 37682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37533-37682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:37301-37451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37185-37216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35708-35729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35392-35450:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35024-35143:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34833-34937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34652-34750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34397-34553:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34202-34308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:33998-34102:-1:exon

SUPT5H
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: SUPT5H
note: SPT5 homolog, DSIF elongation factor subunit; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38244..45792)
location: region:38244-45792:-1
so has part: feature:38244-45792:-1:exon
subclass of: SO_0000010

125686374
type: Gene
SIO_000068: ncbigene

position:38244:-1
position: 38244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45792:-1
position: 45792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38244-45792:-1:exon

SUPT5H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: SUPT5H
product: SPT5 homolog, DSIF elongation factor subunit, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930280.1
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(38244..38472,38698..38793,38885..39088,39161..39329,39523..39681,39894..39999,40186..40313,40395..40497,40572..40676,40765..40849,40951..41076,41294..41440,41656..41802,41922..42077,42180..42316,42395..42488,42749..42854,42986..43056,43131..43220,43300..43551,43653..43721,43804..43834,43987..44052,44143..44211,44304..44373,44496..44507,45107..45172,45256..45406,45486..45792))
location: region:38244-45792:-1
so has part: feature:45486-45792:-1:exon
so has part: feature:45256-45406:-1:exon
so has part: feature:45107-45172:-1:exon
so has part: feature:44496-44507:-1:exon
so has part: feature:44304-44373:-1:exon
so has part: feature:44143-44211:-1:exon
so has part: feature:43987-44052:-1:exon
so has part: feature:43804-43834:-1:exon
so has part: feature:43653-43721:-1:exon
so has part: feature:43300-43551:-1:exon
so has part: feature:43131-43220:-1:exon
so has part: feature:42986-43056:-1:exon
so has part: feature:42749-42854:-1:exon
so has part: feature:42395-42488:-1:exon
so has part: feature:42180-42316:-1:exon
so has part: feature:41922-42077:-1:exon
so has part: feature:41656-41802:-1:exon
so has part: feature:41294-41440:-1:exon
so has part: feature:40951-41076:-1:exon
so has part: feature:40765-40849:-1:exon
so has part: feature:40572-40676:-1:exon
so has part: feature:40395-40497:-1:exon
so has part: feature:40186-40313:-1:exon
so has part: feature:39894-39999:-1:exon
so has part: feature:39523-39681:-1:exon
so has part: feature:39161-39329:-1:exon
so has part: feature:38885-39088:-1:exon
so has part: feature:38698-38793:-1:exon
so has part: feature:38244-38472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:45486-45792:-1:exon

position:45486:-1
position: 45486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45256-45406:-1:exon

position:45256:-1
position: 45256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45406:-1
position: 45406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:45107-45172:-1:exon

position:45107:-1
position: 45107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45172:-1
position: 45172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:44496-44507:-1:exon

position:44496:-1
position: 44496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44507:-1
position: 44507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44304-44373:-1:exon

position:44304:-1
position: 44304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44373:-1
position: 44373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:44143-44211:-1:exon

position:44143:-1
position: 44143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44211:-1
position: 44211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:43987-44052:-1:exon

position:43987:-1
position: 43987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44052:-1
position: 44052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43804-43834:-1:exon

position:43804:-1
position: 43804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43834:-1
position: 43834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:43653-43721:-1:exon

position:43653:-1
position: 43653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43721:-1
position: 43721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:43300-43551:-1:exon

position:43300:-1
position: 43300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43551:-1
position: 43551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:43131-43220:-1:exon

position:43131:-1
position: 43131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43220:-1
position: 43220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:42986-43056:-1:exon

position:42986:-1
position: 42986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43056:-1
position: 43056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:42749-42854:-1:exon

position:42749:-1
position: 42749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42854:-1
position: 42854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:42395-42488:-1:exon

position:42395:-1
position: 42395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42488:-1
position: 42488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:42180-42316:-1:exon

position:42180:-1
position: 42180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42316:-1
position: 42316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:41922-42077:-1:exon

position:41922:-1
position: 41922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42077:-1
position: 42077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:41656-41802:-1:exon

position:41656:-1
position: 41656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41802:-1
position: 41802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:41294-41440:-1:exon

position:41294:-1
position: 41294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41440:-1
position: 41440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:40951-41076:-1:exon

position:40951:-1
position: 40951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41076:-1
position: 41076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:40765-40849:-1:exon

position:40765:-1
position: 40765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40849:-1
position: 40849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:40572-40676:-1:exon

position:40572:-1
position: 40572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40676:-1
position: 40676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:40395-40497:-1:exon

position:40395:-1
position: 40395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40497:-1
position: 40497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:40186-40313:-1:exon

position:40186:-1
position: 40186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40313:-1
position: 40313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:39894-39999:-1:exon

position:39894:-1
position: 39894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39999:-1
position: 39999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:39523-39681:-1:exon

position:39523:-1
position: 39523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39681:-1
position: 39681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:39161-39329:-1:exon

position:39161:-1
position: 39161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39329:-1
position: 39329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:38885-39088:-1:exon

position:38885:-1
position: 38885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39088:-1
position: 39088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:38698-38793:-1:exon

position:38698:-1
position: 38698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38793:-1
position: 38793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:38244-38472:-1:exon

position:38472:-1
position: 38472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT5H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: SUPT5H
product: SPT5 homolog, DSIF elongation factor subunit, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930281.1
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(38244..38472,38698..38793,38885..39088,39161..39329,39523..39681,39894..39999,40186..40313,40395..40497,40572..40676,40765..40849,40951..41076,41294..41440,41656..41802,41922..42077,42180..42316,42395..42488,42749..42854,42986..43056,43131..43220,43300..43551,43653..43721,43804..43834,43987..44052,44143..44211,44304..44373,45107..45172,45256..45406,45486..45791))
location: region:38244-45791:-1
so has part: feature:45486-45791:-1:exon
so has part: feature:45256-45406:-1:exon
so has part: feature:45107-45172:-1:exon
so has part: feature:44304-44373:-1:exon
so has part: feature:44143-44211:-1:exon
so has part: feature:43987-44052:-1:exon
so has part: feature:43804-43834:-1:exon
so has part: feature:43653-43721:-1:exon
so has part: feature:43300-43551:-1:exon
so has part: feature:43131-43220:-1:exon
so has part: feature:42986-43056:-1:exon
so has part: feature:42749-42854:-1:exon
so has part: feature:42395-42488:-1:exon
so has part: feature:42180-42316:-1:exon
so has part: feature:41922-42077:-1:exon
so has part: feature:41656-41802:-1:exon
so has part: feature:41294-41440:-1:exon
so has part: feature:40951-41076:-1:exon
so has part: feature:40765-40849:-1:exon
so has part: feature:40572-40676:-1:exon
so has part: feature:40395-40497:-1:exon
so has part: feature:40186-40313:-1:exon
so has part: feature:39894-39999:-1:exon
so has part: feature:39523-39681:-1:exon
so has part: feature:39161-39329:-1:exon
so has part: feature:38885-39088:-1:exon
so has part: feature:38698-38793:-1:exon
so has part: feature:38244-38472:-1:exon

position:45791:-1
position: 45791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45486-45791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45256-45406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45107-45172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44304-44373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44143-44211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43987-44052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43804-43834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43653-43721:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43300-43551:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43131-43220:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42986-43056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:42749-42854:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:42395-42488:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42180-42316:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:41922-42077:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41656-41802:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:41294-41440:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:40951-41076:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:40765-40849:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:40572-40676:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:40395-40497:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:40186-40313:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:39894-39999:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:39523-39681:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:39161-39329:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:38885-39088:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:38698-38793:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:38244-38472:-1:exon

SUPT5H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: SUPT5H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor SPT5 isoform X2
translation: MSDSDDSNFSEEESERSSEAEEAEEAEAEEERASAAGSEKEEVEEEEEEEYDEEEEEEDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGSFAPMSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQGYGGTPNPQTPGYPDPSSPQVTQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(38329..38472,38698..38793,38885..39088,39161..39329,39523..39681,39894..39999,40186..40313,40395..40497,40572..40676,40765..40849,40951..41076,41294..41440,41656..41802,41922..42077,42180..42316,42395..42488,42749..42854,42986..43056,43131..43220,43300..43551,43653..43721,43804..43834,43987..44052,44143..44211,44304..44373,45107..45172,45256..45406,45486..45566))
location: region:38329-45566:-1
so has part: feature:45486-45566:-1:exon
so has part: feature:45256-45406:-1:exon
so has part: feature:45107-45172:-1:exon
so has part: feature:44304-44373:-1:exon
so has part: feature:44143-44211:-1:exon
so has part: feature:43987-44052:-1:exon
so has part: feature:43804-43834:-1:exon
so has part: feature:43653-43721:-1:exon
so has part: feature:43300-43551:-1:exon
so has part: feature:43131-43220:-1:exon
so has part: feature:42986-43056:-1:exon
so has part: feature:42749-42854:-1:exon
so has part: feature:42395-42488:-1:exon
so has part: feature:42180-42316:-1:exon
so has part: feature:41922-42077:-1:exon
so has part: feature:41656-41802:-1:exon
so has part: feature:41294-41440:-1:exon
so has part: feature:40951-41076:-1:exon
so has part: feature:40765-40849:-1:exon
so has part: feature:40572-40676:-1:exon
so has part: feature:40395-40497:-1:exon
so has part: feature:40186-40313:-1:exon
so has part: feature:39894-39999:-1:exon
so has part: feature:39523-39681:-1:exon
so has part: feature:39161-39329:-1:exon
so has part: feature:38885-39088:-1:exon
so has part: feature:38698-38793:-1:exon
so has part: feature:38329-38472:-1:exon

XP_048786238.1
type: Protein
SIO_000068: ncbiprotein

position:38329:-1
position: 38329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45566:-1
position: 45566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45486-45566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45256-45406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45107-45172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44304-44373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44143-44211:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43987-44052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43804-43834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43653-43721:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43300-43551:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43131-43220:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42986-43056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:42749-42854:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:42395-42488:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42180-42316:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:41922-42077:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41656-41802:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:41294-41440:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:40951-41076:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:40765-40849:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:40572-40676:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:40395-40497:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:40186-40313:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:39894-39999:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:39523-39681:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:39161-39329:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:38885-39088:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:38698-38793:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:38329-38472:-1:exon

SUPT5H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: SUPT5H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor SPT5 isoform X1
translation: MSDSDDSNFSEEESERSSEAEEAEEAEAEEERASAAGSEKEEVEEEEEEEYDEEEEEEDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGSFAPMSPRISSPMHPSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQGYGGTPNPQTPGYPDPSSPQVTQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPVTPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA
SIO_010081: SUPT5H
subclass of: SO_0000673
so part of: SUPT5H
location: complement(join(38329..38472,38698..38793,38885..39088,39161..39329,39523..39681,39894..39999,40186..40313,40395..40497,40572..40676,40765..40849,40951..41076,41294..41440,41656..41802,41922..42077,42180..42316,42395..42488,42749..42854,42986..43056,43131..43220,43300..43551,43653..43721,43804..43834,43987..44052,44143..44211,44304..44373,44496..44507,45107..45172,45256..45406,45486..45566))
location: region:38329-45566:-1
so has part: feature:45486-45566:-1:exon
so has part: feature:45256-45406:-1:exon
so has part: feature:45107-45172:-1:exon
so has part: feature:44496-44507:-1:exon
so has part: feature:44304-44373:-1:exon
so has part: feature:44143-44211:-1:exon
so has part: feature:43987-44052:-1:exon
so has part: feature:43804-43834:-1:exon
so has part: feature:43653-43721:-1:exon
so has part: feature:43300-43551:-1:exon
so has part: feature:43131-43220:-1:exon
so has part: feature:42986-43056:-1:exon
so has part: feature:42749-42854:-1:exon
so has part: feature:42395-42488:-1:exon
so has part: feature:42180-42316:-1:exon
so has part: feature:41922-42077:-1:exon
so has part: feature:41656-41802:-1:exon
so has part: feature:41294-41440:-1:exon
so has part: feature:40951-41076:-1:exon
so has part: feature:40765-40849:-1:exon
so has part: feature:40572-40676:-1:exon
so has part: feature:40395-40497:-1:exon
so has part: feature:40186-40313:-1:exon
so has part: feature:39894-39999:-1:exon
so has part: feature:39523-39681:-1:exon
so has part: feature:39161-39329:-1:exon
so has part: feature:38885-39088:-1:exon
so has part: feature:38698-38793:-1:exon
so has part: feature:38329-38472:-1:exon

XP_048786237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45486-45566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45256-45406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45107-45172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:44496-44507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44304-44373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44143-44211:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:43987-44052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43804-43834:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43653-43721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43300-43551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:43131-43220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:42986-43056:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:42749-42854:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:42395-42488:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:42180-42316:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:41922-42077:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:41656-41802:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:41294-41440:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:40951-41076:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:40765-40849:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:40572-40676:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:40395-40497:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:40186-40313:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:39894-39999:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:39523-39681:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:39161-39329:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:38885-39088:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:38698-38793:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:38329-38472:-1:exon

MED29
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: MED29
note: mediator complex subunit 29; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(49028..50352)
location: region:49028-50352:-1
so has part: feature:49028-50352:-1:exon
subclass of: SO_0000010

125686376
type: Gene
SIO_000068: ncbigene

position:49028:-1
position: 49028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50352:-1
position: 50352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49028-50352:-1:exon

MED29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: MED29
product: mediator complex subunit 29, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930283.1
SIO_010081: MED29
subclass of: SO_0000673
so part of: MED29
location: complement(join(49028..49362,49486..49570,49846..49904,50041..50352))
location: region:49028-50352:-1
so has part: feature:50041-50352:-1:exon
so has part: feature:49846-49904:-1:exon
so has part: feature:49486-49570:-1:exon
so has part: feature:49028-49362:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50041-50352:-1:exon

position:50041:-1
position: 50041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49846-49904:-1:exon

position:49846:-1
position: 49846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49904:-1
position: 49904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49486-49570:-1:exon

position:49486:-1
position: 49486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49570:-1
position: 49570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49028-49362:-1:exon

position:49362:-1
position: 49362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: MED29
product: mediator complex subunit 29, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930284.1
SIO_010081: MED29
subclass of: SO_0000673
so part of: MED29
location: complement(join(49028..49328,49486..49570,49846..49904,50041..50349))
location: region:49028-50349:-1
so has part: feature:50041-50349:-1:exon
so has part: feature:49846-49904:-1:exon
so has part: feature:49486-49570:-1:exon
so has part: feature:49028-49328:-1:exon

position:50349:-1
position: 50349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50041-50349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49846-49904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49486-49570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49028-49328:-1:exon

position:49328:-1
position: 49328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: MED29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 29 isoform X1
translation: MAAPSQPPPGPPAAPAPPPLSAAPGPGQGAGPGPPLPAQVAAAQAQDFDPVQRFRLLIPQLKESLQTLMKVAAQNLVQNSNIDNGQKSADGALQRFDKSLEEFYALCDQLELCLPHVLSADTPSPAPGARVPLTELRQCKARTCVGASGSQRRGGCRREPALQPVPAPHQGTDCRRQGHPQRPTGGCQQDHRQAAPHGGTLMRSWG
SIO_010081: MED29
subclass of: SO_0000673
so part of: MED29
location: complement(join(49084..49362,49486..49570,49846..49904,50041..50238))
location: region:49084-50238:-1
so has part: feature:50041-50238:-1:exon
so has part: feature:49846-49904:-1:exon
so has part: feature:49486-49570:-1:exon
so has part: feature:49084-49362:-1:exon

XP_048786240.1
type: Protein
SIO_000068: ncbiprotein

position:49084:-1
position: 49084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50238:-1
position: 50238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50041-50238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49846-49904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49486-49570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49084-49362:-1:exon

MED29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: MED29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 29 isoform X2
translation: MAAPSQPPPGPPAAPAPPPLSAAPGPGQGAGPGPPLPAQVAAAQAQDFDPVQRFRLLIPQLKESLQTLMKVAAQNLVQNSNIDNGQKSADGALQRFDKSLEEFYALCDQLELCLRLAHECLSQSFDSAKHAPALVPAAPKGEGAAGESLPYNQYLPLIKAQIAGAKDIHNALLEGANKITGKLPPTGGP
SIO_010081: MED29
subclass of: SO_0000673
so part of: MED29
location: complement(join(49101..49328,49486..49570,49846..49904,50041..50238))
location: region:49101-50238:-1
so has part: feature:50041-50238:-1:exon
so has part: feature:49846-49904:-1:exon
so has part: feature:49486-49570:-1:exon
so has part: feature:49101-49328:-1:exon

XP_048786241.1
type: Protein
SIO_000068: ncbiprotein

position:49101:-1
position: 49101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50041-50238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49846-49904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49486-49570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:49101-49328:-1:exon

PAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: PAF1
note: PAF1 homolog, Paf1/RNA polymerase II complex component; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 50293..53866
location: region:50293-53866:1
so has part: feature:50293-53866:1:exon
subclass of: SO_0000010

125686375
type: Gene
SIO_000068: ncbigene

position:50293:1
position: 50293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53866:1
position: 53866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50293-53866:1:exon

PAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: PAF1
product: PAF1 homolog, Paf1/RNA polymerase II complex component
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048930282.1
SIO_010081: PAF1
subclass of: SO_0000673
so part of: PAF1
location: join(50293..50460,50557..50586,50670..50762,51432..51553,51646..51712,51812..51913,52007..52111,52228..52297,52391..52494,52585..52701,52892..53020,53104..53210,53297..53384,53469..53866)
location: region:50293-53866:1
so has part: feature:50293-50460:1:exon
so has part: feature:50557-50586:1:exon
so has part: feature:50670-50762:1:exon
so has part: feature:51432-51553:1:exon
so has part: feature:51646-51712:1:exon
so has part: feature:51812-51913:1:exon
so has part: feature:52007-52111:1:exon
so has part: feature:52228-52297:1:exon
so has part: feature:52391-52494:1:exon
so has part: feature:52585-52701:1:exon
so has part: feature:52892-53020:1:exon
so has part: feature:53104-53210:1:exon
so has part: feature:53297-53384:1:exon
so has part: feature:53469-53866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50293-50460:1:exon

position:50460:1
position: 50460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50557-50586:1:exon

position:50557:1
position: 50557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50586:1
position: 50586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50670-50762:1:exon

position:50670:1
position: 50670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50762:1
position: 50762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:51432-51553:1:exon

position:51432:1
position: 51432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51553:1
position: 51553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51646-51712:1:exon

position:51646:1
position: 51646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51712:1
position: 51712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51812-51913:1:exon

position:51812:1
position: 51812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51913:1
position: 51913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:52007-52111:1:exon

position:52007:1
position: 52007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52111:1
position: 52111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:52228-52297:1:exon

position:52228:1
position: 52228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52297:1
position: 52297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:52391-52494:1:exon

position:52391:1
position: 52391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52494:1
position: 52494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:52585-52701:1:exon

position:52585:1
position: 52585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52701:1
position: 52701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:52892-53020:1:exon

position:52892:1
position: 52892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53020:1
position: 53020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:53104-53210:1:exon

position:53104:1
position: 53104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53210:1
position: 53210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:53297-53384:1:exon

position:53297:1
position: 53297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53384:1
position: 53384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:53469-53866:1:exon

position:53469:1
position: 53469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: PAF1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: RNA polymerase II-associated factor 1 homolog
translation: MAPTIQTQAQREEPGHRPSSHRTLPERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRIDPGVLLDPADEKLLEEEIQAPTSSKRSQQHAKVVPWMRKTEYISTEFNRYGVSNEKPEVKIGVSVKQQFTEEEIYKDRDSQIAAIEKTFEDAQKAITQHYSKPRVTPIEVMPVFPDFKMWINPCAQVIFDSDPAPKDTSGAAALEMMSQAMIRGMMDEEGNQFVAYFLPVEETLRKRKRDQEEEMDYAPEDVYDYKIAREYNWNVKNKASKGYEENYFFIFREGDGVYYNELETRVRLSKRRARAGVQSGTNAVLVVKHRDMNEKELEAQEARRAQLENHEPEEEEEEEMEAEKEAAGSDEEREKGSESEGAASGDEEEEAEGSGGSSSEQGGSARSEDEAEDEEEEEARGARRGGSDAARAARDQEEIFGSDDDEDEEEDDEEEESEGGGSEGGPPRSPRLSPSEASDDESPSEASDSSSD
SIO_010081: PAF1
subclass of: SO_0000673
so part of: PAF1
location: join(50411..50460,50557..50586,50670..50762,51432..51553,51646..51712,51812..51913,52007..52111,52228..52297,52391..52494,52585..52701,52892..53020,53104..53210,53297..53384,53469..53841)
location: region:50411-53841:1
so has part: feature:50411-50460:1:exon
so has part: feature:50557-50586:1:exon
so has part: feature:50670-50762:1:exon
so has part: feature:51432-51553:1:exon
so has part: feature:51646-51712:1:exon
so has part: feature:51812-51913:1:exon
so has part: feature:52007-52111:1:exon
so has part: feature:52228-52297:1:exon
so has part: feature:52391-52494:1:exon
so has part: feature:52585-52701:1:exon
so has part: feature:52892-53020:1:exon
so has part: feature:53104-53210:1:exon
so has part: feature:53297-53384:1:exon
so has part: feature:53469-53841:1:exon

XP_048786239.1
type: Protein
SIO_000068: ncbiprotein

position:50411:1
position: 50411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53841:1
position: 53841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50411-50460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50557-50586:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50670-50762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:51432-51553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51646-51712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51812-51913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:52007-52111:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:52228-52297:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:52391-52494:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:52585-52701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52892-53020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:53104-53210:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53297-53384:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53469-53841:1:exon

SAMD4B
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: SAMD4B
note: sterile alpha motif domain containing 4B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(54714..60238)
location: region:54714-60238:-1
so has part: feature:54714-60238:-1:exon
subclass of: SO_0000010

125686382
type: Gene
SIO_000068: ncbigene

position:54714:-1
position: 54714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60238:-1
position: 60238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54714-60238:-1:exon

SAMD4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: SAMD4B
product: sterile alpha motif domain containing 4B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_048930288.1
SIO_010081: SAMD4B
subclass of: SO_0000673
so part of: SAMD4B
location: complement(join(54714..54866,54999..55082,55650..55767,56266..56461,56811..56929,57019..57104,57198..57435,57677..57761,57871..57980,58104..58386,58697..59159,59485..60238))
location: region:54714-60238:-1
so has part: feature:59485-60238:-1:exon
so has part: feature:58697-59159:-1:exon
so has part: feature:58104-58386:-1:exon
so has part: feature:57871-57980:-1:exon
so has part: feature:57677-57761:-1:exon
so has part: feature:57198-57435:-1:exon
so has part: feature:57019-57104:-1:exon
so has part: feature:56811-56929:-1:exon
so has part: feature:56266-56461:-1:exon
so has part: feature:55650-55767:-1:exon
so has part: feature:54999-55082:-1:exon
so has part: feature:54714-54866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59485-60238:-1:exon

position:59485:-1
position: 59485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58697-59159:-1:exon

position:58697:-1
position: 58697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59159:-1
position: 59159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58104-58386:-1:exon

position:58104:-1
position: 58104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58386:-1
position: 58386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:57871-57980:-1:exon

position:57871:-1
position: 57871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57980:-1
position: 57980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:57677-57761:-1:exon

position:57677:-1
position: 57677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57761:-1
position: 57761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:57198-57435:-1:exon

position:57198:-1
position: 57198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57435:-1
position: 57435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:57019-57104:-1:exon

position:57019:-1
position: 57019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57104:-1
position: 57104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:56811-56929:-1:exon

position:56811:-1
position: 56811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56929:-1
position: 56929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:56266-56461:-1:exon

position:56266:-1
position: 56266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56461:-1
position: 56461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:55650-55767:-1:exon

position:55650:-1
position: 55650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55767:-1
position: 55767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:54999-55082:-1:exon

position:54999:-1
position: 54999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55082:-1
position: 55082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:54714-54866:-1:exon

position:54866:-1
position: 54866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAMD4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: SAMD4B
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(58852..58854),aa:OTHER)
product: LOW QUALITY PROTEIN: protein Smaug homolog 2
translation: MMFRDQVGIVAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCADIHLLEAEANSAAAISQWPQEPAEAAVALLLAHLPLLQPGNAAAKAEYMKRLQKVLAYAIESNRCVEESRQLLSYALIHPATTLDDRSALALWLGHLEERLAGTPAATTSPSSPXCCTPPHPAVPPHDWPEHGPPEIGPPWPEAAPRENGHPPFHPPSSGNGPGGHSGVGPGPNSRLSAALPCQLHPSPLKRSLSLVPGSPQGGSGEWPGGGRGARTPSHPLRRPRPLSPQSSVASSGSEQTEEPTGGRNTFQEDGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEHHLESQNVTKGXRHKIALSIQKLRERQSVLKALEKDILEGGNLWTALQELQQIMVTPIKAFRPPPAPPANGAHDGAPPGAADAFAPHPAADTEAPAAPVPDGDIPGQFTRVMGKVCTQLLVSRPDEENITSYLQLLEKCLSHEAFTETQKKRLLSWKQQVLKLLRAFPKKVPLDGQGYRPPKGWGFGSNSLPIAGSVGGAGGRRGQRPFALPPRALPPARMGLLGPAGGGPAPRPPLGAAPLGAQGRQSLWFSSGGAGGAPGSRSVVQRTHSLPVHTSPQALLAFPQECPVPGTDLEINPTLESLCLSMTEHALGDGTDKTSTI
SIO_010081: SAMD4B
subclass of: SO_0000673
so part of: SAMD4B
location: complement(join(54838..54866,54999..55082,55650..55767,56266..56461,56811..56929,57019..57104,57198..57435,57677..57761,57871..57980,58104..58386,58697..59159,59485..59680))
location: region:54838-59680:-1
so has part: feature:59485-59680:-1:exon
so has part: feature:58697-59159:-1:exon
so has part: feature:58104-58386:-1:exon
so has part: feature:57871-57980:-1:exon
so has part: feature:57677-57761:-1:exon
so has part: feature:57198-57435:-1:exon
so has part: feature:57019-57104:-1:exon
so has part: feature:56811-56929:-1:exon
so has part: feature:56266-56461:-1:exon
so has part: feature:55650-55767:-1:exon
so has part: feature:54999-55082:-1:exon
so has part: feature:54838-54866:-1:exon

XP_048786245.1
type: Protein
SIO_000068: ncbiprotein

position:54838:-1
position: 54838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59680:-1
position: 59680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59485-59680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58697-59159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58104-58386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57871-57980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:57677-57761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:57198-57435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:57019-57104:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:56811-56929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56266-56461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55650-55767:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:54999-55082:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:54838-54866:-1:exon

LRFN1
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: LRFN1
note: leucine rich repeat and fibronectin type III domain containing 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 60746..65964
location: region:60746-65964:1
so has part: feature:60746-65964:1:exon
subclass of: SO_0000010

125686367
type: Gene
SIO_000068: ncbigene

position:60746:1
position: 60746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65964:1
position: 65964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60746-65964:1:exon

LRFN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LRFN1
product: leucine rich repeat and fibronectin type III domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_048930272.1
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: join(60746..60963,62418..62554,62985..64323,64985..65964)
location: region:60746-65964:1
so has part: feature:60746-60963:1:exon
so has part: feature:62418-62554:1:exon
so has part: feature:62985-64323:1:exon
so has part: feature:64985-65964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60746-60963:1:exon

position:60963:1
position: 60963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62418-62554:1:exon

position:62418:1
position: 62418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62554:1
position: 62554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62985-64323:1:exon

position:62985:1
position: 62985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64323:1
position: 64323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64985-65964:1:exon

position:64985:1
position: 64985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRFN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: LRFN1
product: leucine rich repeat and fibronectin type III domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_048930271.1
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: join(60746..60963,62507..62554,62985..64323,64985..65964)
location: region:60746-65964:1
so has part: feature:60746-60963:1:exon
so has part: feature:62507-62554:1:exon
so has part: feature:62985-64323:1:exon
so has part: feature:64985-65964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60746-60963:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62507-62554:1:exon

position:62507:1
position: 62507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:62985-64323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64985-65964:1:exon

LRFN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LRFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1
translation: MAKLLVPLVVLGAVAQRCPPRCLCPAAAPSPTLLCARTGLLAVPPSLDRGAVELRLADNFIGSVGRADFANMSSLVHLTLSRNGLRRLAPGAFADLRALRALHLDGNRLPALSGPQLRGLASLRHLILANNQLAAIEPAAFAAFAATVEDLDLSHNNLPALPWEAVAAMASLATLTLDHNLLERVPATALSRLPRLARLDLTANRLRALPPVPGPPGPSLAAGGNPLHCNCELLWLRRLARPDGLESCASPPSLAGRLLWAVPEEELACRAPHIAGAAASPSAVLEGQPLRLGCAANGDPPPALHWLGPDGRLVQNGSRRALGADGSLQLRVATLRDHGAFTCVASNAAGEAAARVEVAVLPLPVPHRHGDGDGEAQAGPGPSDMARAGANESLSVGAERRIVAADLTASSARIRWLPQRHVPGLRMFQIQYNSSIDDSLVYRLLPPSSRSFVLRDLAAGREYDLCVSALYAEGTAAPPASRALGCVRFATAGGTPGCAAPRPHFLGGTVIIVIGAAIAASVLVFILILTARYKAARRPPAAVASVCSQTNGTHRAPEPEPPPPQPLAVPPAPPVLSAPGGSRALFPSHSFPRRARTRRHGSLPRLDAPDALPALRPSFGSTHWMLESTV
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: join(62996..64323,64985..65549)
location: region:62996-65549:1
so has part: feature:62996-64323:1:exon
so has part: feature:64985-65549:1:exon

XP_048786228.1
type: Protein
SIO_000068: ncbiprotein

position:62996:1
position: 62996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65549:1
position: 65549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62996-64323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64985-65549:1:exon

LRFN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: LRFN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type III domain-containing protein 1
translation: MAKLLVPLVVLGAVAQRCPPRCLCPAAAPSPTLLCARTGLLAVPPSLDRGAVELRLADNFIGSVGRADFANMSSLVHLTLSRNGLRRLAPGAFADLRALRALHLDGNRLPALSGPQLRGLASLRHLILANNQLAAIEPAAFAAFAATVEDLDLSHNNLPALPWEAVAAMASLATLTLDHNLLERVPATALSRLPRLARLDLTANRLRALPPVPGPPGPSLAAGGNPLHCNCELLWLRRLARPDGLESCASPPSLAGRLLWAVPEEELACRAPHIAGAAASPSAVLEGQPLRLGCAANGDPPPALHWLGPDGRLVQNGSRRALGADGSLQLRVATLRDHGAFTCVASNAAGEAAARVEVAVLPLPVPHRHGDGDGEAQAGPGPSDMARAGANESLSVGAERRIVAADLTASSARIRWLPQRHVPGLRMFQIQYNSSIDDSLVYRLLPPSSRSFVLRDLAAGREYDLCVSALYAEGTAAPPASRALGCVRFATAGGTPGCAAPRPHFLGGTVIIVIGAAIAASVLVFILILTARYKAARRPPAAVASVCSQTNGTHRAPEPEPPPPQPLAVPPAPPVLSAPGGSRALFPSHSFPRRARTRRHGSLPRLDAPDALPALRPSFGSTHWMLESTV
SIO_010081: LRFN1
subclass of: SO_0000673
so part of: LRFN1
location: join(62996..64323,64985..65549)
location: region:62996-65549:1
so has part: feature:62996-64323:1:exon
so has part: feature:64985-65549:1:exon

XP_048786229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62996-64323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64985-65549:1:exon

SYCN
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: SYCN
note: syncollin; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 66875..67881
location: region:66875-67881:1
so has part: feature:66875-67881:1:exon
subclass of: SO_0000010

125686372
type: Gene
SIO_000068: ncbigene

position:66875:1
position: 66875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67881:1
position: 67881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66875-67881:1:exon

SYCN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: SYCN
product: syncollin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_048930277.1
SIO_010081: SYCN
subclass of: SO_0000673
so part of: SYCN
location: join(66875..67089,67243..67881)
location: region:66875-67881:1
so has part: feature:66875-67089:1:exon
so has part: feature:67243-67881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66875-67089:1:exon

position:67089:1
position: 67089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67243-67881:1:exon

position:67243:1
position: 67243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYCN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: SYCN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syncollin
translation: MAAVLAVVLAAVLAVCGAECPTAADLKPDNGTQLCAQLYTQNSVYYDECCTGSSLSVLPDDDVPYMPTGWSGKVSSLVVGKRCELKVWSKAGKSGTKKTFSAGSFPRLQEVRRGLFLNWNNAIRSYYCKCS
SIO_010081: SYCN
subclass of: SO_0000673
so part of: SYCN
location: 67356..67751
location: region:67356-67751:1
so has part: feature:67356-67751:1:exon

XP_048786234.1
type: Protein
SIO_000068: ncbiprotein

position:67356:1
position: 67356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67751:1
position: 67751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67356-67751:1:exon

PAK4
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: PAK4
note: p21 (RAC1) activated kinase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(68915..75179)
location: region:68915-75179:-1
so has part: feature:68915-75179:-1:exon
subclass of: SO_0000010

125686366
type: Gene
SIO_000068: ncbigene

position:68915:-1
position: 68915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75179:-1
position: 75179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68915-75179:-1:exon

PAK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: PAK4
product: p21 (RAC1) activated kinase 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_048930270.1
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(68915..69736,69841..69975,70078..70203,71054..71180,71251..71384,71635..72076,72562..73168,74956..75179))
location: region:68915-75179:-1
so has part: feature:74956-75179:-1:exon
so has part: feature:72562-73168:-1:exon
so has part: feature:71635-72076:-1:exon
so has part: feature:71251-71384:-1:exon
so has part: feature:71054-71180:-1:exon
so has part: feature:70078-70203:-1:exon
so has part: feature:69841-69975:-1:exon
so has part: feature:68915-69736:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74956-75179:-1:exon

position:74956:-1
position: 74956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72562-73168:-1:exon

position:72562:-1
position: 72562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73168:-1
position: 73168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71635-72076:-1:exon

position:71635:-1
position: 71635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72076:-1
position: 72076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:71251-71384:-1:exon

position:71251:-1
position: 71251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71384:-1
position: 71384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:71054-71180:-1:exon

position:71054:-1
position: 71054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71180:-1
position: 71180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:70078-70203:-1:exon

position:70078:-1
position: 70078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70203:-1
position: 70203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:69841-69975:-1:exon

position:69841:-1
position: 69841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69975:-1
position: 69975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:68915-69736:-1:exon

position:69736:-1
position: 69736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: PAK4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase PAK 4
translation: MFSKKKKRIEISAPSNFEHRVHTGYDQQEQKFTGLPRQWQGIIEESAKRPKPLVDPVCITAIQHGSQKTIVRGTKAAKDGSLTWLLDEFENMSVSRSNSLRRDSPPFPPRRDQLCQENGLTEDFGRSKDKSCPAPRGEPDRGKERPRQRDPQRPRGQEPGPRTGGAPPPPEYPKPPPERDGPADRDCGERDERVVRRERAEPCDKRPKSTYGNGSSPQSPRDKRPLSGPNIRTPNIPVSEGVMKTAQQTGRPFNTYPRAETDPVRGAGAQAEPRPGRPQEAAPNGPASSATGSSRAQPPGPPRSKVPEPPAGLTPHASEPHLARPPSLAPHPPAVGPQQPRSPQREPQRVSHEQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVNKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGVMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNVHKVSPSLKGFLDRMLVRDPVQRATANELLKHPFLGKAGPPSCIVPLMRQNRMR
SIO_010081: PAK4
subclass of: SO_0000673
so part of: PAK4
location: complement(join(69581..69736,69841..69975,70078..70203,71054..71180,71251..71384,71635..72076,72562..73168,74956..75159))
location: region:69581-75159:-1
so has part: feature:74956-75159:-1:exon
so has part: feature:72562-73168:-1:exon
so has part: feature:71635-72076:-1:exon
so has part: feature:71251-71384:-1:exon
so has part: feature:71054-71180:-1:exon
so has part: feature:70078-70203:-1:exon
so has part: feature:69841-69975:-1:exon
so has part: feature:69581-69736:-1:exon

XP_048786227.1
type: Protein
SIO_000068: ncbiprotein

position:69581:-1
position: 69581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75159:-1
position: 75159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74956-75159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72562-73168:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71635-72076:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71251-71384:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71054-71180:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:70078-70203:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69841-69975:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69581-69736:-1:exon

MRPS12
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: MRPS12
note: mitochondrial ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 89235..90225
location: region:89235-90225:1
so has part: feature:89235-90225:1:exon
subclass of: SO_0000010

125686371
type: Gene
SIO_000068: ncbigene

position:89235:1
position: 89235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90225:1
position: 90225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89235-90225:1:exon

MRPS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: MRPS12
product: mitochondrial ribosomal protein S12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_048930276.1
SIO_010081: MRPS12
subclass of: SO_0000673
so part of: MRPS12
location: join(89235..89513,89597..89673,89745..90225)
location: region:89235-90225:1
so has part: feature:89235-89513:1:exon
so has part: feature:89597-89673:1:exon
so has part: feature:89745-90225:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89235-89513:1:exon

position:89513:1
position: 89513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89597-89673:1:exon

position:89597:1
position: 89597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89673:1
position: 89673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89745-90225:1:exon

position:89745:1
position: 89745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: MRPS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S12, mitochondrial
translation: MSLCAVLRTAALLRGCVFGSPPTAAMATLNQMHRKGRPKPPPPKLGPTFGRPQLKGVVVRNLIRKPKKPNSANRKCVRVRLSNGREVVCFVPGEGHNLQEHHVVLVQGGRTQDLPGVKLTIVRGKYDCAHVQKKK
SIO_010081: MRPS12
subclass of: SO_0000673
so part of: MRPS12
location: join(89625..89673,89745..90103)
location: region:89625-90103:1
so has part: feature:89625-89673:1:exon
so has part: feature:89745-90103:1:exon

XP_048786233.1
type: Protein
SIO_000068: ncbiprotein

position:89625:1
position: 89625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90103:1
position: 90103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89625-89673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89745-90103:1:exon

SARS2
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: SARS2
note: seryl-tRNA synthetase 2, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90288..93665
location: region:90288-93665:1
so has part: feature:90288-93665:1:exon
subclass of: SO_0000010

125686368
type: Gene
SIO_000068: ncbigene

position:90288:1
position: 90288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93665:1
position: 93665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90288-93665:1:exon

SARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: SARS2
product: seryl-tRNA synthetase 2, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_048930273.1
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: join(90288..90539,90913..91008,91093..91122,91215..91355,91434..91488,91594..91657,91733..91838,91936..91983,92068..92176,92361..92406,92510..92597,92682..92794,92885..92978,93106..93198,93310..93375,93487..93665)
location: region:90288-93665:1
so has part: feature:90288-90539:1:exon
so has part: feature:90913-91008:1:exon
so has part: feature:91093-91122:1:exon
so has part: feature:91215-91355:1:exon
so has part: feature:91434-91488:1:exon
so has part: feature:91594-91657:1:exon
so has part: feature:91733-91838:1:exon
so has part: feature:91936-91983:1:exon
so has part: feature:92068-92176:1:exon
so has part: feature:92361-92406:1:exon
so has part: feature:92510-92597:1:exon
so has part: feature:92682-92794:1:exon
so has part: feature:92885-92978:1:exon
so has part: feature:93106-93198:1:exon
so has part: feature:93310-93375:1:exon
so has part: feature:93487-93665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90288-90539:1:exon

position:90539:1
position: 90539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90913-91008:1:exon

position:90913:1
position: 90913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91008:1
position: 91008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91093-91122:1:exon

position:91093:1
position: 91093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91122:1
position: 91122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91215-91355:1:exon

position:91215:1
position: 91215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91355:1
position: 91355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:91434-91488:1:exon

position:91434:1
position: 91434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91488:1
position: 91488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:91594-91657:1:exon

position:91594:1
position: 91594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91657:1
position: 91657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91733-91838:1:exon

position:91733:1
position: 91733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91838:1
position: 91838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:91936-91983:1:exon

position:91936:1
position: 91936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91983:1
position: 91983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:92068-92176:1:exon

position:92068:1
position: 92068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92176:1
position: 92176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:92361-92406:1:exon

position:92361:1
position: 92361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92406:1
position: 92406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:92510-92597:1:exon

position:92510:1
position: 92510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92597:1
position: 92597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:92682-92794:1:exon

position:92682:1
position: 92682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92794:1
position: 92794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:92885-92978:1:exon

position:92885:1
position: 92885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92978:1
position: 92978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:93106-93198:1:exon

position:93106:1
position: 93106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93198:1
position: 93198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:93310-93375:1:exon

position:93310:1
position: 93310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93375:1
position: 93375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:93487-93665:1:exon

position:93487:1
position: 93487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine--tRNA ligase, mitochondrial isoform X1
translation: MAAPRALAAARRAVAVAARGRRTAGTGAAPRGRAERSRLYEHVREGLSARPQLDMAALSAHPAEAARELERRKGPLREGELREILQTWARLEEVRAAIAGLEAEKEEVALAVHALVTTHAKDTLHAVPEYTALRERGRAVRLQLRELLAEEAALDERFYLHALQLPNSTHPAVPVGDESQARVLEVVGEKPAFDFQPKGHLELGEELDIIRQRRLSHISGHRSYYLCGAGALLQHALVNFVLAKLVPKGFLPMTVPDLLRGAVFEGCGMQPNITPSPVYCIDPARFEDLCLAGTSEVGIAGYFMDHAVRLQDMPIRIVCSSTCYRAETDTGREPWGLYRVHQFTKVEMFGVTAAESGAESEMMLDEFLTLQKEIFSELGLHYRVLDMPTQELGLPAYRKFDIEAWMPGRGKYGEISSTSNCTDYQSRRLNIMYSDGAGKLHHAHTVNGTACAVPRLLIALLECNQQPDGSVRVPPALRPFVGQDVIERPPAPLLRYIGPNQPGGGGTGGATCPLLNAREALK
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: join(90288..90539,90913..91008,91093..91122,91215..91355,91434..91488,91594..91657,91733..91838,91936..91983,92068..92176,92361..92406,92510..92597,92682..92794,92885..92978,93106..93198,93310..93375,93487..93654)
location: region:90288-93654:1
so has part: feature:90288-90539:1:exon
so has part: feature:90913-91008:1:exon
so has part: feature:91093-91122:1:exon
so has part: feature:91215-91355:1:exon
so has part: feature:91434-91488:1:exon
so has part: feature:91594-91657:1:exon
so has part: feature:91733-91838:1:exon
so has part: feature:91936-91983:1:exon
so has part: feature:92068-92176:1:exon
so has part: feature:92361-92406:1:exon
so has part: feature:92510-92597:1:exon
so has part: feature:92682-92794:1:exon
so has part: feature:92885-92978:1:exon
so has part: feature:93106-93198:1:exon
so has part: feature:93310-93375:1:exon
so has part: feature:93487-93654:1:exon

XP_048786230.1
type: Protein
SIO_000068: ncbiprotein

position:93654:1
position: 93654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90288-90539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90913-91008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91093-91122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91215-91355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91434-91488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91594-91657:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91733-91838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91936-91983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92068-92176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92361-92406:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92510-92597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92682-92794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92885-92978:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93106-93198:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93310-93375:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:93487-93654:1:exon

SARS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: SARS2
product: seryl-tRNA synthetase 2, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XM_048930274.1
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: join(90288..90539,90913..91008,91093..91122,91215..91355,91434..91488,91594..91657,91733..91838,91936..91983,92068..92176,92361..92406,92510..92597,92682..92794,92907..92978,93106..93198,93310..93375)
location: region:90288-93375:1
so has part: feature:90288-90539:1:exon
so has part: feature:90913-91008:1:exon
so has part: feature:91093-91122:1:exon
so has part: feature:91215-91355:1:exon
so has part: feature:91434-91488:1:exon
so has part: feature:91594-91657:1:exon
so has part: feature:91733-91838:1:exon
so has part: feature:91936-91983:1:exon
so has part: feature:92068-92176:1:exon
so has part: feature:92361-92406:1:exon
so has part: feature:92510-92597:1:exon
so has part: feature:92682-92794:1:exon
so has part: feature:92907-92978:1:exon
so has part: feature:93106-93198:1:exon
so has part: feature:93310-93375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90288-90539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90913-91008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91093-91122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91215-91355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91434-91488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91594-91657:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91733-91838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91936-91983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92068-92176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92361-92406:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92510-92597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92682-92794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92907-92978:1:exon

position:92907:1
position: 92907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:93106-93198:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93310-93375:1:exon

SARS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: SARS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine--tRNA ligase, mitochondrial isoform X2
translation: MAAPRALAAARRAVAVAARGRRTAGTGAAPRGRAERSRLYEHVREGLSARPQLDMAALSAHPAEAARELERRKGPLREGELREILQTWARLEEVRAAIAGLEAEKEEVALAVHALVTTHAKDTLHAVPEYTALRERGRAVRLQLRELLAEEAALDERFYLHALQLPNSTHPAVPVGDESQARVLEVVGEKPAFDFQPKGHLELGEELDIIRQRRLSHISGHRSYYLCGAGALLQHALVNFVLAKLVPKGFLPMTVPDLLRGAVFEGCGMQPNITPSPVYCIDPARFEDLCLAGTSEVGIAGYFMDHAVRLQDMPIRIVCSSTCYRAETDTGREPWGLYRVHQFTKVEMFGVTAAESGAESEMMLDEFLTLQKEIFSELGLHYRSWDSQRTASLTSKPGCQDGANMGRSPAPPTAPITKAGG
SIO_010081: SARS2
subclass of: SO_0000673
so part of: SARS2
location: join(90288..90539,90913..91008,91093..91122,91215..91355,91434..91488,91594..91657,91733..91838,91936..91983,92068..92176,92361..92406,92510..92597,92682..92794,92907..92978,93106..93151)
location: region:90288-93151:1
so has part: feature:90288-90539:1:exon
so has part: feature:90913-91008:1:exon
so has part: feature:91093-91122:1:exon
so has part: feature:91215-91355:1:exon
so has part: feature:91434-91488:1:exon
so has part: feature:91594-91657:1:exon
so has part: feature:91733-91838:1:exon
so has part: feature:91936-91983:1:exon
so has part: feature:92068-92176:1:exon
so has part: feature:92361-92406:1:exon
so has part: feature:92510-92597:1:exon
so has part: feature:92682-92794:1:exon
so has part: feature:92907-92978:1:exon
so has part: feature:93106-93151:1:exon

XP_048786231.1
type: Protein
SIO_000068: ncbiprotein

position:93151:1
position: 93151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90288-90539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90913-91008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91093-91122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91215-91355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91434-91488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:91594-91657:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91733-91838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:91936-91983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:92068-92176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:92361-92406:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92510-92597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92682-92794:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92907-92978:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93106-93151:1:exon

NFKBIB
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: NFKBIB
note: NFKB inhibitor beta; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(93791..96066)
location: region:93791-96066:-1
so has part: feature:93791-96066:-1:exon
subclass of: SO_0000010

125686369
type: Gene
SIO_000068: ncbigene

position:93791:-1
position: 93791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96066:-1
position: 96066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93791-96066:-1:exon

NFKBIB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: NFKBIB
product: NFKB inhibitor beta
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_048930275.1
SIO_010081: NFKBIB
subclass of: SO_0000673
so part of: NFKBIB
location: complement(join(93791..94028,94125..94379,94476..94564,94972..95191,95566..95671,95768..96066))
location: region:93791-96066:-1
so has part: feature:95768-96066:-1:exon
so has part: feature:95566-95671:-1:exon
so has part: feature:94972-95191:-1:exon
so has part: feature:94476-94564:-1:exon
so has part: feature:94125-94379:-1:exon
so has part: feature:93791-94028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95768-96066:-1:exon

position:95768:-1
position: 95768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95566-95671:-1:exon

position:95566:-1
position: 95566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95671:-1
position: 95671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94972-95191:-1:exon

position:94972:-1
position: 94972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95191:-1
position: 95191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94476-94564:-1:exon

position:94476:-1
position: 94476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94564:-1
position: 94564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94125-94379:-1:exon

position:94125:-1
position: 94125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94379:-1
position: 94379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:93791-94028:-1:exon

position:94028:-1
position: 94028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFKBIB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: NFKBIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NF-kappa-B inhibitor beta
translation: MAAAGAAPSGDAKRTEGDEWYDSGLGSLGEGQLAPLSHSPGPGPESPEEAPPEAPEPEAEVWLRHVLSFVSEDGDTALHLAVIHEHEAFLDSILQRAAGTAYMDLQNDLGQTALHLAVILGLPGFVRKLRAAGAGLRLQERGGHTALHLACREGQPHCAQHLLGGLGCPLSEEERAQLESVNYDGYTPLHVAILRKDVELVQLLLRAGADSNKAEPSCGRSPLHLAVEAQSLEMAELLLRAGADPAARGYGGRTPLYSARLRPDPRLPQLLRAFGAPDSSGDSEDSEEDEDSEEEDSSGEEYDDIVINSGRCAD
SIO_010081: NFKBIB
subclass of: SO_0000673
so part of: NFKBIB
location: complement(join(93981..94028,94125..94379,94476..94564,94972..95191,95566..95671,95768..95994))
location: region:93981-95994:-1
so has part: feature:95768-95994:-1:exon
so has part: feature:95566-95671:-1:exon
so has part: feature:94972-95191:-1:exon
so has part: feature:94476-94564:-1:exon
so has part: feature:94125-94379:-1:exon
so has part: feature:93981-94028:-1:exon

XP_048786232.1
type: Protein
SIO_000068: ncbiprotein

position:93981:-1
position: 93981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95994:-1
position: 95994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95768-95994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:95566-95671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94972-95191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94476-94564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94125-94379:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93981-94028:-1:exon

SIRT2
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: SIRT2
note: sirtuin 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96450..99216
location: region:96450-99216:1
so has part: feature:96450-99216:1:exon
subclass of: SO_0000010

125686383
type: Gene
SIO_000068: ncbigene

position:96450:1
position: 96450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99216:1
position: 99216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96450-99216:1:exon

SIRT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: SIRT2
product: sirtuin 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 4 bases in 4 codons
transcript id: XM_048930289.1
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: join(96450..96739,96811..96975,97059..97167,97287..97341,97413..97481,97564..97693,97816..97875,97980..98036,98126..98202,98318..98366,98476..98549,98821..98884,98992..99216)
location: region:96450-99216:1
so has part: feature:96450-96739:1:exon
so has part: feature:96811-96975:1:exon
so has part: feature:97059-97167:1:exon
so has part: feature:97287-97341:1:exon
so has part: feature:97413-97481:1:exon
so has part: feature:97564-97693:1:exon
so has part: feature:97816-97875:1:exon
so has part: feature:97980-98036:1:exon
so has part: feature:98126-98202:1:exon
so has part: feature:98318-98366:1:exon
so has part: feature:98476-98549:1:exon
so has part: feature:98821-98884:1:exon
so has part: feature:98992-99216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96450-96739:1:exon

position:96739:1
position: 96739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96811-96975:1:exon

position:96811:1
position: 96811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96975:1
position: 96975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97167:1:exon

position:97059:1
position: 97059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97167:1
position: 97167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97287-97341:1:exon

position:97287:1
position: 97287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97341:1
position: 97341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:97413-97481:1:exon

position:97413:1
position: 97413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97481:1
position: 97481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:97564-97693:1:exon

position:97564:1
position: 97564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97693:1
position: 97693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:97816-97875:1:exon

position:97816:1
position: 97816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97875:1
position: 97875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:97980-98036:1:exon

position:97980:1
position: 97980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98036:1
position: 98036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:98126-98202:1:exon

position:98126:1
position: 98126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98202:1
position: 98202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:98318-98366:1:exon

position:98318:1
position: 98318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98366:1
position: 98366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:98476-98549:1:exon

position:98476:1
position: 98476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98549:1
position: 98549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:98821-98884:1:exon

position:98821:1
position: 98821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98884:1
position: 98884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:98992-99216:1:exon

position:98992:1
position: 98992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIRT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: SIRT2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: NAD-dependent protein deacetylase sirtuin-2
translation: MPGIPGSWNLQPNIVDAPTACREASPGAPMSGADGNGGGNGGGSGGAEAGGSLRPSVTPRPTPQLPPPGAEPDAEAEGGSTEDPDMELLRNLLARTLGLGTEPPERVLDELSLTGIARFMQSERCRRVVCMVGAGSPRVSTAAGIPDFRSPXTGLYANLSRYELPYPEAIFDISYFKQHPEPXLALAKELLPGQLKPTVCHYFMRLLKEKGLLLRCYTQNIDTLERVAGLQXEDLVEAHGTFQTAHCLRSSCRHQYDLSWVKEKIFSSLVPKCDKCQSGVKPDIVFFGENLPSRFFSLLQSDFQKVDLLIIMGTSLQVQPFASLVSRVPASTPRLLINKEKTGQSDAFMSLMGFGCGMDFDSDKAYRQWAWLGDCDEGCLALAELLGWKKELQELVRKEHAAIDAMAAQGDTSSTSGGDPKSRRGRADGSGGRTESSGASSKGPGDGKEP
SIO_010081: SIRT2
subclass of: SO_0000673
so part of: SIRT2
location: join(96483..96739,96811..96975,97059..97167,97287..97341,97413..97481,97564..97693,97816..97875,97980..98036,98126..98202,98318..98366,98476..98549,98821..98884,98992..99178)
location: region:96483-99178:1
so has part: feature:96483-96739:1:exon
so has part: feature:96811-96975:1:exon
so has part: feature:97059-97167:1:exon
so has part: feature:97287-97341:1:exon
so has part: feature:97413-97481:1:exon
so has part: feature:97564-97693:1:exon
so has part: feature:97816-97875:1:exon
so has part: feature:97980-98036:1:exon
so has part: feature:98126-98202:1:exon
so has part: feature:98318-98366:1:exon
so has part: feature:98476-98549:1:exon
so has part: feature:98821-98884:1:exon
so has part: feature:98992-99178:1:exon

XP_048786246.1
type: Protein
SIO_000068: ncbiprotein

position:96483:1
position: 96483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99178:1
position: 99178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96483-96739:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96811-96975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97287-97341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97413-97481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97564-97693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97816-97875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97980-98036:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98126-98202:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98318-98366:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98476-98549:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:98821-98884:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:98992-99178:1:exon

HNRNPL
type: Gene
subclass of: SO_0000704
RO_0002162: 64668
gene: HNRNPL
note: heterogeneous nuclear ribonucleoprotein L; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 99786..102079
location: region:99786-102079:1
so has part: feature:99786-102079:1:exon
subclass of: SO_0000010

125686384
type: Gene
SIO_000068: ncbigene

position:99786:1
position: 99786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102079:1
position: 102079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99786-102079:1:exon

HNRNPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 64668
gene: HNRNPL
product: heterogeneous nuclear ribonucleoprotein L
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_048930291.1
SIO_010081: HNRNPL
subclass of: SO_0000673
so part of: HNRNPL
location: join(99786..99854,99963..100374,101170..101288,101357..101595,101762..102079)
location: region:99786-102079:1
so has part: feature:99786-99854:1:exon
so has part: feature:99963-100374:1:exon
so has part: feature:101170-101288:1:exon
so has part: feature:101357-101595:1:exon
so has part: feature:101762-102079:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99786-99854:1:exon

position:99854:1
position: 99854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99963-100374:1:exon

position:99963:1
position: 99963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100374:1
position: 100374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101170-101288:1:exon

position:101170:1
position: 101170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101288:1
position: 101288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101357-101595:1:exon

position:101357:1
position: 101357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101595:1
position: 101595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:101762-102079:1:exon

position:101762:1
position: 101762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HNRNPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 64668
gene: HNRNPL
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 4 bases in 4 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein L
translation: MERALRLSGVGPAQWGRGGGGAAERGAMSRRRWRGPQSAEGSGRGGEMGKMAAGGGGGGGSGRYYGGGGDGGRAPKRQKTENAEPPPHGPGGPGGGGGAGAGGAENYDDPHKTPASPVVHIRGLIDGVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDILGACNAVNYAADNQIYIAGHPAFVNYSTSQKISRPGDSDDSRGVNNVLLFTILNPIYSSRRSLTSVSLQDVLYTICNPCGPVQRIVIFRKNGVQAMVEYPLVPQSSSILPCCRGVAGNGFKCSSVAALLVLLQGRFSVAVSWLCNRSYIERTALQRCSLCSLLP
SIO_010081: HNRNPL
subclass of: SO_0000673
so part of: HNRNPL
location: join(100061..100374,101170..101288,101357..101595,101762..102074)
location: region:100061-102074:1
so has part: feature:100061-100374:1:exon
so has part: feature:101170-101288:1:exon
so has part: feature:101357-101595:1:exon
so has part: feature:101762-102074:1:exon

XP_048786248.1
type: Protein
SIO_000068: ncbiprotein

position:100061:1
position: 100061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102074:1
position: 102074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100061-100374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101170-101288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101357-101595:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101762-102074:1:exon