Lagopus muta isolate bLagMut1 chromosome 32, bLagMut1 primary, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Tetraoninae; Lagopus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM041507.1.\nAssembly name: bLagMut1 primary\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2022/05/12. The original whole-genome shotgun project has the\naccession JAMCCT000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 17-JUL-2021\nAssembly Method :: Minimap2 v. 0.15.1-r334; purge_dups v.\n 1.2.5; salsa v. 2.3\nAssembly Name :: bLagMut1 primary\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 57.75x\nSequencing Technology :: PacBio Sequel II HiFi; Dovetail genomics\n Hi-C; Illumina NovaSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: Lagopus muta Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
uncharacterized LOC125686181; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686181, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686181, transcript variant X2
uncharacterized LOC125686181, transcript variant X5
uncharacterized LOC125686181, transcript variant X4
uncharacterized LOC125686181, transcript variant X1
uncharacterized LOC125686181, transcript variant X3
uncharacterized protein LOC125686181 isoform X4
uncharacterized protein LOC125686181 isoform X1
uncharacterized protein LOC125686181 isoform X2
uncharacterized protein LOC125686181 isoform X3
uncharacterized LOC125686181, transcript variant X17
uncharacterized LOC125686181, transcript variant X18
uncharacterized LOC125686181, transcript variant X16
uncharacterized LOC125686181, transcript variant X8
uncharacterized LOC125686181, transcript variant X13
uncharacterized LOC125686181, transcript variant X10
uncharacterized LOC125686181, transcript variant X15
uncharacterized LOC125686181, transcript variant X7
uncharacterized LOC125686181, transcript variant X14
uncharacterized LOC125686181, transcript variant X11
uncharacterized LOC125686181, transcript variant X9
uncharacterized LOC125686181, transcript variant X12
uncharacterized LOC125686181, transcript variant X19
uncharacterized LOC125686180; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
splicing factor 3A subunit 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
splicing factor 3A subunit 2-like, transcript variant X1
splicing factor 3A subunit 2-like, transcript variant X2
splicing factor 3A subunit 2-like isoform X2
DNA-directed RNA polymerase II subunit RPB1-like isoform X1
olfactory receptor 14C36-like; Derived by automated computational analysis using gene prediction method: Gnomon.
olfactory receptor 14C36-like, transcript variant X1
olfactory receptor 14C36-like, transcript variant X2
olfactory receptor 14A16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 257 Proteins
olfactory receptor 14C36-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 241 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 250 Proteins
olfactory receptor 14J1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 253 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
uncharacterized LOC125686200; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686200, transcript variant X2
uncharacterized LOC125686200, transcript variant X3
uncharacterized LOC125686200, transcript variant X1
uncharacterized protein LOC125686200 isoform X2
uncharacterized protein LOC125686200 isoform X3
uncharacterized protein LOC125686200 isoform X1
uncharacterized LOC125686201; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 737-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 737-like, transcript variant X1
zinc finger protein 737-like, transcript variant X2
cyclin-dependent kinase 16-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: cyclin-dependent kinase 16-like
uncharacterized LOC125686184; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686184, transcript variant X1
uncharacterized LOC125686184, transcript variant X3
uncharacterized LOC125686184, transcript variant X2
zinc finger protein ZIC 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein ZIC 5-like, transcript variant X3
zinc finger protein ZIC 5-like, transcript variant X2
zinc finger protein ZIC 5-like, transcript variant X1
zinc finger protein ZIC 5-like isoform X3
zinc finger protein ZIC 5-like isoform X2
zinc finger protein ZIC 5-like isoform X1
uncharacterized LOC125686193; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686190; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686190, transcript variant X1
uncharacterized LOC125686190, transcript variant X6
uncharacterized LOC125686190, transcript variant X3
uncharacterized protein LOC125686190 isoform X1
uncharacterized protein LOC125686190 isoform X3
uncharacterized LOC125686190, transcript variant X5
uncharacterized LOC125686190, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
uncharacterized protein LOC125686190 isoform X4
uncharacterized protein LOC125686190 isoform X5
uncharacterized LOC125686192; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686192, transcript variant X2
uncharacterized LOC125686190, transcript variant X2
uncharacterized protein LOC125686190 isoform X2
uncharacterized LOC125686192, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins
NACHT, LRR and PYD domains-containing protein 1b allele 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X3
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X1
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X2
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X4
NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X2
NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X1
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X5
NACHT, LRR and PYD domains-containing protein 1b allele 3-like isoform X3
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X6
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X7
NACHT, LRR and PYD domains-containing protein 1b allele 5-like isoform X4
NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 181 Proteins
protein MANBAL-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein MANBAL-like, transcript variant X25
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
protein MANBAL-like, transcript variant X21
protein MANBAL-like, transcript variant X22
protein MANBAL-like, transcript variant X23
protein MANBAL-like, transcript variant X12
protein MANBAL-like, transcript variant X24
protein MANBAL-like, transcript variant X18
protein MANBAL-like, transcript variant X17
protein MANBAL-like, transcript variant X13
protein MANBAL-like, transcript variant X20
protein MANBAL-like, transcript variant X19
protein MANBAL-like, transcript variant X15
protein MANBAL-like, transcript variant X11
protein MANBAL-like, transcript variant X26
protein MANBAL-like, transcript variant X14
protein MANBAL-like, transcript variant X16
protein MANBAL-like, transcript variant X27
uncharacterized protein LOC125686119 isoform X16
uncharacterized protein LOC125686119 isoform X15
uncharacterized protein LOC125686119 isoform X11
uncharacterized protein LOC125686119 isoform X18
uncharacterized protein LOC125686119 isoform X17
uncharacterized protein LOC125686119 isoform X13
protein MANBAL-like, transcript variant X28
protein MANBAL-like, transcript variant X9
protein MANBAL-like, transcript variant X10
uncharacterized protein LOC125686119 isoform X9
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
protein MANBAL-like, transcript variant X29
uncharacterized protein LOC125686119 isoform X23
uncharacterized protein LOC125686119 isoform X19
uncharacterized protein LOC125686119 isoform X20
uncharacterized protein LOC125686119 isoform X21
uncharacterized protein LOC125686119 isoform X22
uncharacterized protein LOC125686119 isoform X10
uncharacterized protein LOC125686119 isoform X12
uncharacterized protein LOC125686119 isoform X14
protein MANBAL-like, transcript variant X30
protein MANBAL-like, transcript variant X5
protein MANBAL-like, transcript variant X8
protein MANBAL-like, transcript variant X4
protein MANBAL-like, transcript variant X1
protein MANBAL-like, transcript variant X7
uncharacterized protein LOC125686119 isoform X5
uncharacterized protein LOC125686119 isoform X8
uncharacterized protein LOC125686119 isoform X1
uncharacterized protein LOC125686119 isoform X7
uncharacterized protein LOC125686119 isoform X4
protein MANBAL-like, transcript variant X31
protein MANBAL-like, transcript variant X3
uncharacterized protein LOC125686119 isoform X3
protein MANBAL-like, transcript variant X2
protein MANBAL-like, transcript variant X6
uncharacterized protein LOC125686119 isoform X2
uncharacterized protein LOC125686119 isoform X6
uncharacterized LOC125686121; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 254 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 196 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 109 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 268 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 260 Proteins
olfactory receptor 14C36-like isoform X2
olfactory receptor 14A16-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 81 Proteins
olfactory receptor 14A16-like isoform X2
olfactory receptor 14A16-like, transcript variant X1
olfactory receptor 14A16-like isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 271 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 281 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 266 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 284 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 276 Proteins
AT-rich interactive domain-containing protein 5A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686147; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686147, transcript variant X1
uncharacterized LOC125686147, transcript variant X12
uncharacterized LOC125686147, transcript variant X11
uncharacterized LOC125686147, transcript variant X13
uncharacterized LOC125686147, transcript variant X14
uncharacterized LOC125686147, transcript variant X2
uncharacterized LOC125686147, transcript variant X3
uncharacterized LOC125686147, transcript variant X4
uncharacterized LOC125686147, transcript variant X6
uncharacterized LOC125686147, transcript variant X9
uncharacterized LOC125686147, transcript variant X10
uncharacterized LOC125686147, transcript variant X5
uncharacterized LOC125686147, transcript variant X7
uncharacterized LOC125686147, transcript variant X8
uncharacterized protein LOC125686147 isoform X2
uncharacterized protein LOC125686147 isoform X1
uncharacterized protein LOC125686147 isoform X4
uncharacterized protein LOC125686147 isoform X3
uncharacterized protein LOC125686147 isoform X5
uncharacterized LOC125686144; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686144, transcript variant X10
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
uncharacterized LOC125686144, transcript variant X16
uncharacterized LOC125686144, transcript variant X17
uncharacterized LOC125686144, transcript variant X3
uncharacterized LOC125686144, transcript variant X1
uncharacterized LOC125686144, transcript variant X4
uncharacterized LOC125686144, transcript variant X5
uncharacterized LOC125686144, transcript variant X6
uncharacterized LOC125686144, transcript variant X7
uncharacterized LOC125686144, transcript variant X11
uncharacterized LOC125686144, transcript variant X12
uncharacterized LOC125686144, transcript variant X2
uncharacterized LOC125686144, transcript variant X13
uncharacterized LOC125686144, transcript variant X9
uncharacterized LOC125686144, transcript variant X8
uncharacterized LOC125686144, transcript variant X15
uncharacterized LOC125686144, transcript variant X14
uncharacterized protein LOC125686144 isoform X9
uncharacterized protein LOC125686144 isoform X15
uncharacterized protein LOC125686144 isoform X16
uncharacterized protein LOC125686144 isoform X3
uncharacterized protein LOC125686144 isoform X1
uncharacterized protein LOC125686144 isoform X5
uncharacterized protein LOC125686144 isoform X4
uncharacterized protein LOC125686144 isoform X10
uncharacterized protein LOC125686144 isoform X11
uncharacterized protein LOC125686144 isoform X2
uncharacterized protein LOC125686144 isoform X12
uncharacterized protein LOC125686144 isoform X8
uncharacterized protein LOC125686144 isoform X7
uncharacterized protein LOC125686144 isoform X14
uncharacterized protein LOC125686144 isoform X13
uncharacterized protein LOC125686144 isoform X6
uncharacterized LOC125686144, transcript variant X18
uncharacterized protein LOC125686144 isoform X17
uncharacterized LOC125686151; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686151, transcript variant X1
uncharacterized LOC125686151, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 232 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82 Proteins
uncharacterized LOC125686172; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 273 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 191 Proteins
uncharacterized LOC125686140; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686171; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686150; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686149; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686155; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686166; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 272 Proteins
olfactory receptor 14J1-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
olfactory receptor 14J1-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 163 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 136 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 135 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 145 Proteins
uncharacterized LOC125686168; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686156; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 134 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 106 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 118 Proteins
uncharacterized LOC125686152; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686152, transcript variant X4
uncharacterized protein LOC125686152 isoform X4
uncharacterized LOC125686152, transcript variant X3
uncharacterized LOC125686152, transcript variant X2
uncharacterized protein LOC125686152 isoform X3
uncharacterized protein LOC125686152 isoform X2
uncharacterized LOC125686152, transcript variant X1
uncharacterized protein LOC125686152 isoform X1
uncharacterized LOC125686154; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC125686154, transcript variant X1
uncharacterized LOC125686154, transcript variant X3
uncharacterized LOC125686154, transcript variant X2
uncharacterized LOC125686153; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X8
NACHT, LRR and PYD domains-containing protein 1b allele 3-like isoform X4
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X9
NACHT, LRR and PYD domains-containing protein 1b allele 2-like, transcript variant X10
NACHT, LRR and PYD domains-containing protein 1b allele 5-like isoform X6
NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92 Proteins
uncharacterized LOC125686152, transcript variant X5
uncharacterized LOC125686152, transcript variant X6
uncharacterized LOC125686169; Derived by automated computational analysis using gene prediction method: Gnomon.