Nostoc punctiforme PCC 73102 plasmid pNPUN05, complete sequence.
type: Entry
definition: Nostoc punctiforme PCC 73102 plasmid pNPUN05, complete sequence.
sequence version: NC_010629.1
sequence date: 2023-02-11
sequence: sequence
division: CON
label: NC_010629.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02598449
keyword: RefSeq
source: Nostoc punctiforme PCC 73102 (Nostoc punctiforme ATCC 29133)
organism: Nostoc punctiforme PCC 73102
taxonomy: Bacteria; Cyanobacteriota; Cyanophyceae; Nostocales; Nostocaceae; Nostoc.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001042.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 2351359\nSource DNA available from John C. Meeks (jcMeeks@ucdavis.edu)\nBacteria available from ATCC: ATCC 29133\nContacts: John C. Meeks (jcMeeks@ucdavis.edu)\n David Bruce (microbes@cuba.jgi-psf.org)\nQuality assurance done by JGI-Stanford\nAnnotation done by JGI-ORNL and JGI-PGF\nFinishing done by JGI-LLNL\nFinished microbial genomes have been curated to close all gaps with\ngreater than 98% coverage of at least two independent clones. Each\nbase pair has a minimum q (quality) value of 30 and the total error\nrate is less than one per 50000.\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. it is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/11/2023 10:59:08\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,706\nCDSs (total) :: 7,606\nGenes (coding) :: 7,283\nCDSs (with protein) :: 7,283\nGenes (RNA) :: 100\nrRNAs :: 4, 4, 4 (5S, 16S, 23S)\ncomplete rRNAs :: 4, 4, 4 (5S, 16S, 23S)\ntRNAs :: 84\nncRNAs :: 4\nPseudo Genes (total) :: 323\nCDSs (without protein) :: 323\nPseudo Genes (ambiguous residues) :: 0 of 323\nPseudo Genes (frameshifted) :: 142 of 323\nPseudo Genes (inc…

sequence
subclass of: SO_0000155
sequence length: 26419
topology: circular
so has quality: SO_0000988
location: 1..26419
location: region:1-26419:1
RO_0002162: 63737

NC_010629
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02598449
type: BioSample
SIO_000068: biosample

1
title: Complete sequence of plasmid5 of Nostoc punctiforme ATCC 29133
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Chain, P.
author: Malfatti, S.
author: Shin, M.
author: Vergez, L.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Meeks, J.C.
author: Elhai, J.
author: Campbell, E.L.
author: Thiel, T.
author: Longmire, J.
author: Potts, M.
author: Atlas, R.
journal: Unpublished

2
title: Direct Submission
author: Copeland, A.
author: Lucas, S.
author: Lapidus, A.
author: Glavina del Rio, T.
author: Dalin, E.
author: Tice, H.
author: Pitluck, S.
author: Chain, P.
author: Malfatti, S.
author: Shin, M.
author: Vergez, L.
author: Schmutz, J.
author: Larimer, F.
author: Land, M.
author: Hauser, L.
author: Kyrpides, N.
author: Kim, E.
author: Meeks, J.C.
author: Elhai, J.
author: Campbell, E.L.
author: Thiel, T.
author: Longmire, J.
author: Potts, M.
author: Atlas, R.
journal: Submitted (07-APR-2008) US DOE Joint Genome Institute, 2800 Mitchell Drive B100, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26419:1
position: 26419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26419:1:source
so part of: sequence
organism: Nostoc punctiforme PCC 73102
mol type: genomic DNA
strain: ATCC 29133; PCC 73102
culture collection: ATCC:29133
type material: type strain of Nostoc punctiforme
plasmid: pNPUN05

63737
type: Taxonomy
SIO_000068: taxonomy

NPUN_RS44005
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS44005
so part of: sequence
location: 507..917
location: region:507-917:1
so has part: feature:507-917:1:exon
subclass of: SO_0000010

position:507:1
position: 507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917:1
position: 917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507-917:1:exon

NPUN_RS44005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS44005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNFVPTSIALAGLVMLAASAAPIHAQCASPKYVSGVWKANDGGTYRLHAIGSTIWWVGMSGDDGRSWTNVFKGTRNGNIIDGDWADVRGQPWGHGTLKLRISGTTFMEKIDGTGSGFGGIRWGRGGCNDTQGNPG
SIO_010081: NPUN_RS44005
subclass of: SO_0000673
so part of: NPUN_RS44005
location: 507..917
location: region:507-917:1
so has part: feature:507-917:1:exon

WP_052304757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:507-917:1:exon

NPUN_RS37140
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37140
old locus tag: Npun_ER001
so part of: sequence
location: complement(1249..1566)
location: region:1249-1566:-1
so has part: feature:1249-1566:-1:exon
subclass of: SO_0000010

position:1249:-1
position: 1249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566:-1
position: 1566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1249-1566:-1:exon

NPUN_RS37140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37140
old locus tag: Npun_ER001
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012406963.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MATREIHLELLLGKQVLDSTGKSAGRIEEVRAEQRGEEWVIQEYLIGTIAVLERLSAWTIGLRILHLFGAHKIHSGYTISWEQLDLTDPEKPRLLCTLHDLKALK
SIO_010081: NPUN_RS37140
subclass of: SO_0000673
so part of: NPUN_RS37140
location: complement(1249..1566)
location: region:1249-1566:-1
so has part: feature:1249-1566:-1:exon

WP_041566795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1249-1566:-1:exon

NPUN_RS44405
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS44405
so part of: sequence
location: complement(1553..1681)
location: region:1553-1681:-1
so has part: feature:1553-1681:-1:exon
subclass of: SO_0000010

position:1553:-1
position: 1553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1681:-1
position: 1681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1553-1681:-1:exon

NPUN_RS44405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS44405
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRDVGIDVEVEIEADATPALASEKWLREHIIGRIPGAEHGNS
SIO_010081: NPUN_RS44405
subclass of: SO_0000673
so part of: NPUN_RS44405
location: complement(1553..1681)
location: region:1553-1681:-1
so has part: feature:1553-1681:-1:exon

WP_272913993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1553-1681:-1:exon

NPUN_RS42655
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS42655
old locus tag: Npun_ER002
so part of: sequence
location: complement(1857..2210)
location: region:1857-2210:-1
so has part: feature:1857-2210:-1:exon
subclass of: SO_0000010

position:1857:-1
position: 1857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2210:-1
position: 2210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1857-2210:-1:exon

NPUN_RS42655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS42655
old locus tag: Npun_ER002
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015163241.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNIIRDVLDNQLVDSDQHKLGKVDGIVIELRDGEPPRLSYIETGMTTLARRIHPRLGRWVAAIQSSWGAKRGKVTEAVTRGKVACKYYQTSVSAFIMIGDSDHSPLLKSSDKKWSRN
SIO_010081: NPUN_RS42655
subclass of: SO_0000673
so part of: NPUN_RS42655
location: complement(1857..2210)
location: region:1857-2210:-1
so has part: feature:1857-2210:-1:exon

WP_012412823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1857-2210:-1:exon

NPUN_RS37150
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37150
old locus tag: Npun_EF003
so part of: sequence
location: 2531..2977
location: region:2531-2977:1
so has part: feature:2531-2977:1:exon
subclass of: SO_0000010

position:2531:1
position: 2531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2977:1
position: 2977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531-2977:1:exon

NPUN_RS37150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37150
old locus tag: Npun_EF003
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010999512.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MRTNQTSNRESKLNSRQRLVGIRILLVEDEPDIADLLIFVLETAGAEVMALINAEAAFGILESFHPNILVSNVKLPHHNGNWLIEQIRGHSSPYFRQLPAIAITSYTREFSESKALNAGFNRFLVKLENLESIEGVIVDLLSSRDYTD
SIO_010081: NPUN_RS37150
subclass of: SO_0000673
so part of: NPUN_RS37150
location: 2531..2977
location: region:2531-2977:1
so has part: feature:2531-2977:1:exon

WP_012412824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2531-2977:1:exon

NPUN_RS37155
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37155
old locus tag: Npun_ER004
so part of: sequence
location: complement(3068..3541)
location: region:3068-3541:-1
so has part: feature:3068-3541:-1:exon
subclass of: SO_0000010

position:3068:-1
position: 3068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3541:-1
position: 3541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3068-3541:-1:exon

NPUN_RS37155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37155
old locus tag: Npun_ER004
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012408368.1
GO process: GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: response regulator
translation: MLPKNSNVTYPQKDREFLEQIPQSQSPSLNGLRVLVVDDNDNDDCLCIVTFILSDYQAQTKTATSVDEAIEAIEEWKPDIVISDIGMPDKDGYSLVTSIRNKEASMGGFLPAVALTSYAYPEDISEAIDAGFQEVICKPFEPDDLVAVVARLTGQTI
SIO_010081: NPUN_RS37155
subclass of: SO_0000673
so part of: NPUN_RS37155
location: complement(3068..3541)
location: region:3068-3541:-1
so has part: feature:3068-3541:-1:exon

WP_012412825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3068-3541:-1:exon

NPUN_RS37160
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37160
old locus tag: Npun_ER005
so part of: sequence
location: complement(4018..6657)
location: region:4018-6657:-1
so has part: feature:4018-6657:-1:exon
subclass of: SO_0000010

position:4018:-1
position: 4018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6657:-1
position: 6657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4018-6657:-1:exon

NPUN_RS37160
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37160
old locus tag: Npun_ER005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413390.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: relaxase/mobilization nuclease domain-containing protein
translation: MITKVKANKSFRGTTKYVLEKEKAKIIGGNMYGRSTNELVDQFTLSAHLNPQLKDPCYHLMLSVPKSDRTLNDDELANLSQRHLASVIVLSRLQGDESQVKQPEKRISDTKLKQLVDDFIESELPAYDFFIARHSDKEHDHTHIVASRVNNLDGKSIRTWNNYAHSEHSARLLEREFQLTQVQSSWESKQKAMTRNQLERVECDGLPGEEIMRRAIEQVAVNKPTMPQLIEQLWREYHVKAVVSYYGHGGVRGIKFGIDVGSVNEDGSPRFLWKQGGNLNKYKCSFTKLQTELGINYDPKRDDSEIKHLNNFLDSVDNSQLNQELIPTIFPKKAQAIAENKHQINPAKSDAEQQASSELINTISNFIEQSAVDDTLAETLPQLTEQLSIYRQQLLRAKTAFNDFETGLTTELQSHAEKKAILSISDYIEQSTIESALSQAVLGLTEQLSQYHQQLLEAKTTFNDFDEALTAELQSHPEKRAILSIYDYIEQSTIESALTETVLGLTQQISQYHQQLVEAKTTFNDFETALTAELQSHAEKKAILSIYDYIEQSTVESALTEAVLELTQQLSQYKEQLVTAKATFNDLNAVLANELQSYLEKRAISSIFDYIEQSTVSSALTETVLELTQQLSQNQQQVEAGRTIFDNLEAAIVYLEQLHRSQKTVDAIALNKAQNLAIDKLKLKSNQTAELYEYYSTDLQNLLVTDRDKEIAIQALKDNKLPQDVEEILKASPAGWTQDEARELVLIASNQLATQKSEPENSLTEKQRQEQELLAIAVPIAVELINWQLKESSENSLRFKRATLEKQGKELVFTHDERGEIFRVAVNRNHSGKLEYSPINVGEIEREDIQLWQKAERILQQIIEEKRQQERRQSKGISL
SIO_010081: NPUN_RS37160
subclass of: SO_0000673
so part of: NPUN_RS37160
location: complement(4018..6657)
location: region:4018-6657:-1
so has part: feature:4018-6657:-1:exon

WP_012412826.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4018-6657:-1:exon

NPUN_RS37165
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
gene: mobC
locus tag: NPUN_RS37165
old locus tag: Npun_ER006
so part of: sequence
location: complement(6641..7087)
location: region:6641-7087:-1
so has part: feature:6641-7087:-1:exon
subclass of: SO_0000010

position:6641:-1
position: 6641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7087:-1
position: 7087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6641-7087:-1:exon

NPUN_RS37165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
gene: mobC
locus tag: NPUN_RS37165
old locus tag: Npun_ER006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016861354.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid mobilization relaxosome protein MobC
translation: MQPDPRTNLSNQLADTLTNRSVAPDEKREVTITFRASYAEKTRLEQRCSGVVQSDYIRARLFDYPLPHPKLVIPEVNRQAIYELKKIGNNLNQQTRAINEAVKIGSQPLTNEVKLYLKTLEELTALLEQTRQSLTQPSVEGQRNDYQS
SIO_010081: NPUN_RS37165
subclass of: SO_0000673
so part of: NPUN_RS37165
location: complement(6641..7087)
location: region:6641-7087:-1
so has part: feature:6641-7087:-1:exon

WP_012412827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6641-7087:-1:exon

NPUN_RS37170
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37170
old locus tag: Npun_EF007
so part of: sequence
location: 7612..8133
location: region:7612-8133:1
so has part: feature:7612-8133:1:exon
subclass of: SO_0000010

position:7612:1
position: 7612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8133:1
position: 8133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7612-8133:1:exon

NPUN_RS37170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37170
old locus tag: Npun_EF007
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413392.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNLLLVLNMSRKPKAVPLSKIEDIQISLKQKAATPKTISLSDLVLSLAKPIQDMLDAGYSYDDVSDVFKGHGVELAASGLKSFHKKASTSTDNNLSSSSSDKAVEESVNSDSEPESTDSSTTTNDLVSPVEPDSSPIESSEPSGSSSSKTSKRKKTTPNTSAQFNITDRSEL
SIO_010081: NPUN_RS37170
subclass of: SO_0000673
so part of: NPUN_RS37170
location: 7612..8133
location: region:7612-8133:1
so has part: feature:7612-8133:1:exon

WP_234711222.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7612-8133:1:exon

NPUN_RS37175
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37175
old locus tag: Npun_EF008
so part of: sequence
location: 8130..8951
location: region:8130-8951:1
so has part: feature:8130-8951:1:exon
subclass of: SO_0000010

position:8130:1
position: 8130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8951:1
position: 8951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8130-8951:1:exon

NPUN_RS37175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37175
old locus tag: Npun_EF008
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413393.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRIVMILGGKGGTGKTAFTRLLLDVMHNKGINYLAYDADTENPELYEYYQNFGSGVRLLNFLEVAEAKRFFTEIKAESPDSIIVDMPGASSNKTREIISKFGLFKIAGDLGYRVTLVTVLNLGYSVITSLKTMAEFCGAQADYVIVKNLCWDKGSGFQRWENSKTSAAISELKGIEIEMPELDYSTFDTLTEKGLPYSAATEENGFPFGDYLLVSGFLDQAKPELEKAGAYLGLQQPEVLVAALENTTTSKQTKVTASTSRRGQKKTNEQQQ
SIO_010081: NPUN_RS37175
subclass of: SO_0000673
so part of: NPUN_RS37175
location: 8130..8951
location: region:8130-8951:1
so has part: feature:8130-8951:1:exon

WP_012412829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8130-8951:1:exon

NPUN_RS42455
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS42455
old locus tag: Npun_EF009
so part of: sequence
location: 8935..9678
location: region:8935-9678:1
so has part: feature:8935-9678:1:exon
subclass of: SO_0000010

position:8935:1
position: 8935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9678:1
position: 9678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8935-9678:1:exon

NPUN_RS42455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS42455
old locus tag: Npun_EF009
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016861358.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNNNNGNGNHSNPHSETANLTESSEQGEVKIALGRLYREFENFKQSQKTERERDRAELQAWAQTNLIQNQLLSKAMVTIEMLTTELKNQNLSSNEYEKNNEDLRQELTPLITQLKNMPKSSATLESLEFKGLKSEVLQLKQNGNQLLNHTQKLTMVIQELKNSPPPEPITIEKEVYRAEPIGKYGTMGLFSALFSLLIFVIFNQFIPVKTSDDFNNYLQAIWQRTGYSNVKLQRIEKRLGTDRNRR
SIO_010081: NPUN_RS42455
subclass of: SO_0000673
so part of: NPUN_RS42455
location: 8935..9678
location: region:8935-9678:1
so has part: feature:8935-9678:1:exon

WP_012412830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8935-9678:1:exon

NPUN_RS37185
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37185
old locus tag: Npun_ER010
so part of: sequence
location: complement(9744..9950)
location: region:9744-9950:-1
so has part: feature:9744-9950:-1:exon
subclass of: SO_0000010

position:9744:-1
position: 9744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9950:-1
position: 9950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9744-9950:-1:exon

NPUN_RS37185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37185
old locus tag: Npun_ER010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012412959.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHPIEFKKKWQLTYDELSLVLGYEGDYTVRSWGTNGRHKRNPQNVVYVACRLLDEKWSTQGKLVHSYL
SIO_010081: NPUN_RS37185
subclass of: SO_0000673
so part of: NPUN_RS37185
location: complement(9744..9950)
location: region:9744-9950:-1
so has part: feature:9744-9950:-1:exon

WP_012412831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9744-9950:-1:exon

NPUN_RS37190
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37190
old locus tag: Npun_ER011
so part of: sequence
location: complement(10002..10208)
location: region:10002-10208:-1
so has part: feature:10002-10208:-1:exon
subclass of: SO_0000010

position:10002:-1
position: 10002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10208:-1
position: 10208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10002-10208:-1:exon

NPUN_RS37190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37190
old locus tag: Npun_ER011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012412831.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHPIEFKKKWQLTYNELALVLGYENDFTVRCWGINGGHRRNPQKVAYVACRLLDEKWSSEGKVIDSYL
SIO_010081: NPUN_RS37190
subclass of: SO_0000673
so part of: NPUN_RS37190
location: complement(10002..10208)
location: region:10002-10208:-1
so has part: feature:10002-10208:-1:exon

WP_041566796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10002-10208:-1:exon

NPUN_RS37195
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37195
old locus tag: Npun_ER012
so part of: sequence
location: complement(10424..12223)
location: region:10424-12223:-1
so has part: feature:10424-12223:-1:exon
subclass of: SO_0000010

position:10424:-1
position: 10424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12223:-1
position: 12223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10424-12223:-1:exon

NPUN_RS37195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37195
old locus tag: Npun_ER012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010994159.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ATP-binding protein
translation: MNYLSDKHKQLSESQQSGLMKWFGQLPMDKKAVAIGLSLTVGIGSAAMAWQGTSSDRIYFCIKTPSKALVCRDKDNRPFRMTPFYWQEWKLSGMPRQVVRDPAMGVNGLVKATNPCKPFWAFGGFLGFALAGWMLRHCQYEEKQRAVFEDIAQKRDAAKAEMAARSELLESYRDVAIAEVQLQADLDLIANDRTVDIQKAEIYAHTEIEVTQMEATDAIFEAQTAGMTDQQKAEYIKQLREMKTPYLQGSQTLQGTIDPNDKVTGADNQAIAPQDNKTAWVQNLIKQTALIWGNQGGGKSWLARYVIQLKKQAGYRVIVLDPDSNRSEWRGVESYHSWDEIEQQIRDYVQELESRLKTFNNSSLSESQWRQKLWASGKALSLICEEATTYGDFIKDAELLDKFGKLALTKSRKQEMPITVVAHNNTQTCLFGIKGLHNLVSKMLQVECLAEVDPVTLQPSSTGFAHVKLDSSNEWLDVNLPKMTAKISDFSDALPAESNPNPPIDKATLERIYELEFNLGSKADNTQSEPNKLSPQAQKLYEYFIRTERVEADVREFKGNFKVQGERFSVELIKSWMYEIVGAGLANWIGEGIIKLNQD
SIO_010081: NPUN_RS37195
subclass of: SO_0000673
so part of: NPUN_RS37195
location: complement(10424..12223)
location: region:10424-12223:-1
so has part: feature:10424-12223:-1:exon

WP_012412833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10424-12223:-1:exon

NPUN_RS37200
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37200
old locus tag: Npun_ER013
so part of: sequence
location: complement(12220..12759)
location: region:12220-12759:-1
so has part: feature:12220-12759:-1:exon
subclass of: SO_0000010

position:12220:-1
position: 12220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12759:-1
position: 12759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12220-12759:-1:exon

NPUN_RS37200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37200
old locus tag: Npun_ER013
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010994158.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLVRKRNEDPHSVSPFLMEGLAQTPQQQKQEQPSQPLPENNRGRTFRRAGNASEVVAGSCLNSAVIFTFHLLQVHPVGMFLAVGTAHLYFTATATGEGFNNFVTNLMTGCSASLALLCALSDPISEWNEARTSTSTVKTSIESVYKPKTAESSSWMDGAGVGIFLAILMIFLFGGSQRK
SIO_010081: NPUN_RS37200
subclass of: SO_0000673
so part of: NPUN_RS37200
location: complement(12220..12759)
location: region:12220-12759:-1
so has part: feature:12220-12759:-1:exon

WP_012412834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12220-12759:-1:exon

NPUN_RS37205
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37205
old locus tag: Npun_ER014
so part of: sequence
location: complement(12784..13500)
location: region:12784-13500:-1
so has part: feature:12784-13500:-1:exon
subclass of: SO_0000010

position:12784:-1
position: 12784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13500:-1
position: 13500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12784-13500:-1:exon

NPUN_RS37205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37205
old locus tag: Npun_ER014
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010994157.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDFAIRNPVVGHSSHIDEKAQSWGGFESDILGYLSDINKLEQFADYANNAQELSDRLEPFLDNAKVVFEAMEKLTKGQVTWTELRKQYGSHVAGAIAKIRKLNSEFDSEMGKIDAQDRADLLRIDQKRKHGLAEVAAQLHHDLQAELWRHENKISGIENRQVVQAERQAITTGLREKRQQLLARARYGSRALEPNQTPQEVIPVQSQNHAPASSVSATGTVRGWGAMLGNLWQKLGDR
SIO_010081: NPUN_RS37205
subclass of: SO_0000673
so part of: NPUN_RS37205
location: complement(12784..13500)
location: region:12784-13500:-1
so has part: feature:12784-13500:-1:exon

WP_012412835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12784-13500:-1:exon

NPUN_RS37210
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37210
old locus tag: Npun_ER015
so part of: sequence
location: complement(13513..13956)
location: region:13513-13956:-1
so has part: feature:13513-13956:-1:exon
subclass of: SO_0000010

position:13513:-1
position: 13513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13956:-1
position: 13956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13513-13956:-1:exon

NPUN_RS37210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37210
old locus tag: Npun_ER015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413372.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTLDYKNPNDWGKSPLTDSALRKQQFKAENPEQWAAMISADIQALSTPIFESEDYPPFTGTEFLATHETIDDHPYSAAFGQFLGNGIDPDIANTLAFGENRFDLISEDLDDPVRQLATRIYNRFEEMGYWDELPQESSDINYDNIPY
SIO_010081: NPUN_RS37210
subclass of: SO_0000673
so part of: NPUN_RS37210
location: complement(13513..13956)
location: region:13513-13956:-1
so has part: feature:13513-13956:-1:exon

WP_012412836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13513-13956:-1:exon

NPUN_RS42460
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS42460
so part of: sequence
location: complement(14048..14242)
location: region:14048-14242:-1
so has part: feature:14048-14242:-1:exon
subclass of: SO_0000010

position:14048:-1
position: 14048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14242:-1
position: 14242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14048-14242:-1:exon

NPUN_RS42460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS42460
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLSTTALQRNHLYQFRGQQLRYSHRSNCRVNAPFIFNDSKARRFELSQNQVQREVFELNEFCEN
SIO_010081: NPUN_RS42460
subclass of: SO_0000673
so part of: NPUN_RS42460
location: complement(14048..14242)
location: region:14048-14242:-1
so has part: feature:14048-14242:-1:exon

WP_167315736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14048-14242:-1:exon

NPUN_RS37215
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37215
old locus tag: Npun_ER016
so part of: sequence
location: complement(14214..14489)
location: region:14214-14489:-1
so has part: feature:14214-14489:-1:exon
subclass of: SO_0000010

position:14214:-1
position: 14214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14489:-1
position: 14489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14214-14489:-1:exon

NPUN_RS37215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37215
old locus tag: Npun_ER016
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDQDTQKTQPSLTTTEIMTIILGCEQTLRFVQASPNYQQIEASERFSTSNDLKMGDAVQALMEIHEAILNIEFYSQVEGQTYAFNDSLTA
SIO_010081: NPUN_RS37215
subclass of: SO_0000673
so part of: NPUN_RS37215
location: complement(14214..14489)
location: region:14214-14489:-1
so has part: feature:14214-14489:-1:exon

WP_012412837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14214-14489:-1:exon

NPUN_RS37220
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37220
old locus tag: Npun_ER017
so part of: sequence
location: complement(14534..14809)
location: region:14534-14809:-1
so has part: feature:14534-14809:-1:exon
subclass of: SO_0000010

position:14534:-1
position: 14534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14809:-1
position: 14809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14534-14809:-1:exon

NPUN_RS37220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37220
old locus tag: Npun_ER017
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTQTRIVLNPKYKPKAEEILEATGIDNLSQLFTLLLVNYGDCLVNCLKHSHQLPIQSSLVAQTPTHSTLQPPSIKPQPSPQAKKFVPMGSF
SIO_010081: NPUN_RS37220
subclass of: SO_0000673
so part of: NPUN_RS37220
location: complement(14534..14809)
location: region:14534-14809:-1
so has part: feature:14534-14809:-1:exon

WP_148220531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14534-14809:-1:exon

NPUN_RS37225
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37225
old locus tag: Npun_ER018
so part of: sequence
location: complement(14815..15852)
location: region:14815-15852:-1
so has part: feature:14815-15852:-1:exon
subclass of: SO_0000010

position:14815:-1
position: 14815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15852:-1
position: 15852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14815-15852:-1:exon

NPUN_RS37225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37225
old locus tag: Npun_ER018
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015113860.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParM/StbA family protein
translation: MTNAYIQPVYGSSYPTSNGFVSPQHGQIRPRVVFDGGNRFVKWIDPNNVVQCLLSVVKEVSEYQWKRLKPDDQSVLIEIDGKRFVIGRLAQELGGEPTFQTDKCQLASILALAAIQPNPGQTSVHIQQMIVALPNTLNDDDVVAVKRIANHPLTKEFKRNGEYITYTVGEVVPVDETEPAFHYALNQGFFSFPEAKNAIWDLGGGTAIARIYTPNGTMIHDAEVILPGTKALAQQVAVEMKEVYSLDYSPSLQGIMDAIARGDCLYGTDKLDFSSIFEKACDQWVESARREIRSKWAQHLPELGEVLIVGGSADIAAPICATSGDRFKIAPSPQLFNIIAMAYQE
SIO_010081: NPUN_RS37225
subclass of: SO_0000673
so part of: NPUN_RS37225
location: complement(14815..15852)
location: region:14815-15852:-1
so has part: feature:14815-15852:-1:exon

WP_012412839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14815-15852:-1:exon

NPUN_RS39925
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS39925
so part of: sequence
location: 16110..16259
location: region:16110-16259:1
so has part: feature:16110-16259:1:exon
subclass of: SO_0000010

position:16110:1
position: 16110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16259:1
position: 16259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16110-16259:1:exon

NPUN_RS39925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS39925
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015180624.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MTEKQVFVRGKISESQKARFKAACALINRPMDEVMAELIEEWLKTQDIK
SIO_010081: NPUN_RS39925
subclass of: SO_0000673
so part of: NPUN_RS39925
location: 16110..16259
location: region:16110-16259:1
so has part: feature:16110-16259:1:exon

WP_083782524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16110-16259:1:exon

NPUN_RS37230
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37230
old locus tag: Npun_EF019
so part of: sequence
location: 16826..19885
location: region:16826-19885:1
so has part: feature:16826-19885:1:exon
subclass of: SO_0000010

position:16826:1
position: 16826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19885:1
position: 19885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16826-19885:1:exon

NPUN_RS37230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37230
old locus tag: Npun_EF019
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413378.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: heavy metal transporter
translation: MVAILKGQETVGGSAMPGAFASFDIRNFQDQLEPSKEKGKYICPVCGGHNLSIVPETGKYQCFNNCECKDIREAIKPWDEVLAERQKTNFSAAPNKNPIRVKTVKPNPTPIPDGELGLVMLTEPATNIPQPQKLKSKRKGIPGNATETTYQYSPTQWIDRYEWADTSKEKGYDKSFRQWHRLPDGTPEMKKGDQPWGAYRIDEALACAKSVTGTSALLQHEGEGCVEVGREHGLAGITFQGSAWDKKTITPEYQRALDSGIGLIVFLHDADDTGLKKLQTCQDCADEVGIAFIGINPHDICPDLPYKSSDIKEILGQMETPEFIRRLEQEIHAAVAEREQLAKLQNFDDPLNDLDPVVSFIQIAFKTLYGDKSWICAADRLYWHTGNHYKHSPDDTERRRITNFCNSFAVENEQGKKSYPYASPSSVKKVLEWAKMRTGIEAELLNPPGINCTNGIVRPVLIGNKVIPRLDPHTPEDYFIYEPLIEYNPNADTTDCDRLLECLDRPQQEILLRNLAASIDLKTVRKLRGREVKAILAVGLGSNGKDALRECVSIIYGENGLTSVSLADFQLYDEGRKFNLAPLMHSRVNWASENPQTSRIDKIQSLKLFVTGNKLHCERKGKDHIEFTPEAIGIFNLNETPSLQGVMKAIQDRIAVLEFKKTFEKNPDPNNPNELLADPRFAYDKEFIRTKVAPAFLNKMLQALNDLIEEGIDYECTTDAFYNLQKENNHLFDFIEAANLCYVPGKELTAKELWVRLEHYYTQTGTLTIDSDNNRRTWSEQVRPSDKNVKGINQVIARIAQLFPKAVKGTRYCDIAKRNIPVLKGIGILEVTRTTLDETRTTSAPLSAPETTHYQDFRTTRTTFSDSQEKNIEESEMKIQSLPIPMEKEEYATSTGAGDAEPLLDRENCCGESCVSGADQLESGAGMPTDDQAAIAAPIASDTVLVKAEDENLYSLLQIEIDGGNIAGFVGCQVEVRSLSGAVKFAGEMINYDSKNGIVTVATSQGNRDASLCETFVID
SIO_010081: NPUN_RS37230
subclass of: SO_0000673
so part of: NPUN_RS37230
location: 16826..19885
location: region:16826-19885:1
so has part: feature:16826-19885:1:exon

WP_012412840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16826-19885:1:exon

NPUN_RS42660
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS42660
so part of: sequence
location: 20572..20742
location: region:20572-20742:1
so has part: feature:20572-20742:1:exon
subclass of: SO_0000010

position:20572:1
position: 20572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20742:1
position: 20742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20572-20742:1:exon

NPUN_RS42660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS42660
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MMQCYALFMFLSASPEYFRPVDPSLYGQWSDERISIESALTGAHVKLGFWGVRLSS
SIO_010081: NPUN_RS42660
subclass of: SO_0000673
so part of: NPUN_RS42660
location: 20572..20742
location: region:20572-20742:1
so has part: feature:20572-20742:1:exon

WP_193372294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20572-20742:1:exon

NPUN_RS37235
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37235
old locus tag: Npun_ER021
so part of: sequence
location: complement(21015..21881)
location: region:21015-21881:-1
so has part: feature:21015-21881:-1:exon
subclass of: SO_0000010

position:21015:-1
position: 21015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21881:-1
position: 21881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21015-21881:-1:exon

NPUN_RS37235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37235
old locus tag: Npun_ER021
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012407239.1
note: PEP-CTERM proteins occur, often in large numbers, in the proteomes of bacteria that also encode an exosortase, a predicted intramembrane cysteine proteinase. The presence of a PEP-CTERM domain at a protein's C-terminus predicts cleavage within the sorting domain, followed by covalent anchoring to some some component of the (usually Gram-negative) cell surface. Many PEP-CTERM proteins exhibit an unusual sequence composition that includes large numbers of potential glycosylation sites. Expression of one such protein has been shown restore the ability of a bacterium to form floc, a type of biofilm; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PEP-CTERM sorting domain-containing protein
translation: MASQGAYASDLKGTAFSISLECMNDTTGLLMGQNSTDANGWQYAFDSNKDGMNGNYWVGAAPGSVNPYDISGMAIKETATSIIVAINGNMKLTGEAEQGAAGGQIGYGDLFFNMAGKTFDNAMSSGDLFGIHFASANASGVQQLGVYSGVQAKTVTNIKEGYTVATYGGLAGGGNSYESQVKQGGGIVGYGDLTSSYFTNNGKDNTFNLNVIDSGKYLSGISFLAQGNVTQQLLTTGYDASKFNGTQTIAFEFKKSGTVQSTPEPASLAGLGIVGLALAGSKRRKKSS
SIO_010081: NPUN_RS37235
subclass of: SO_0000673
so part of: NPUN_RS37235
location: complement(21015..21881)
location: region:21015-21881:-1
so has part: feature:21015-21881:-1:exon

WP_234711221.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21015-21881:-1:exon

NPUN_RS37240
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37240
old locus tag: Npun_EF022
so part of: sequence
location: 22842..23444
location: region:22842-23444:1
so has part: feature:22842-23444:1:exon
subclass of: SO_0000010

position:22842:1
position: 22842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23444:1
position: 23444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22842-23444:1:exon

NPUN_RS37240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37240
old locus tag: Npun_EF022
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012413382.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MRPPPPTRLPNKHYRSREYLTPSEVRSLLDAALERKARYAHRDYTLMLLMFRHGLRVGEAVGAKCGLRWDALMWAERQIFITREKGSDSGVHPLRDDELVLLKELREMLPDSKYIFVSERGEVMSTDAVRKLLGRLAAQAGLDIKVHCHMMRHACGYYLVNQGYNTREIQDFLGHRDIKHTEKYTKLNARRFLNFDWGDL
SIO_010081: NPUN_RS37240
subclass of: SO_0000673
so part of: NPUN_RS37240
location: 22842..23444
location: region:22842-23444:1
so has part: feature:22842-23444:1:exon

WP_012412842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22842-23444:1:exon

NPUN_RS37245
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37245
old locus tag: Npun_EF023
so part of: sequence
location: 23867..24094
location: region:23867-24094:1
so has part: feature:23867-24094:1:exon
subclass of: SO_0000010

position:23867:1
position: 23867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24094:1
position: 24094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23867-24094:1:exon

NPUN_RS37245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37245
old locus tag: Npun_EF023
inference: COORDINATES: protein motif:HMM:TIGR03893.1
GO component: GO:0005576 - extracellular region [Evidence IEA]
GO function: GO:0005488 - binding [Evidence IEA]
GO process: GO:0019835 - cytolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lichenicidin A2 family type 2 lantibiotic
translation: MAKILISDLHSVGEKEVLLSELSDEEMATIQGGSNAPAEVLAVCAVGGAVLGGPAGFLGGAFVGAILATIVASQE
SIO_010081: NPUN_RS37245
subclass of: SO_0000673
so part of: NPUN_RS37245
location: 23867..24094
location: region:23867-24094:1
so has part: feature:23867-24094:1:exon

WP_012412843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23867-24094:1:exon

NPUN_RS37250
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37250
old locus tag: Npun_ER024
so part of: sequence
location: complement(24266..25282)
location: region:24266-25282:-1
so has part: feature:24266-25282:-1:exon
subclass of: SO_0000010

position:24266:-1
position: 24266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25282:-1
position: 25282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24266-25282:-1:exon

NPUN_RS37250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37250
old locus tag: Npun_ER024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004605407.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PDDEXK nuclease domain-containing protein
translation: MSDLTVNDGSYQQLLDRIGECLALGQQRSFEQVNSVLVETYWQIGRYIVEFEQAGKERAEYGSKLLQVLSRDLKAAYGKGFSRSNLQYMRLFYLNYENCQTLSGKLSWSHYTELLAISDDLARSFYEQQCIQDRWSVRELKRQKDSALFERVALSKDRAEILALAKDGQRIESARDVVKDPYVFEFLDLPDRNYRESELENRLIAELEKFLLELGKGFAFIGQQYRITLNNTHFFVDLVFYHRILKCFVLIDLKTRAVSHQDIGQMNMYLNYFRAEENMEDDNEPIGIVLARDKDEILVEYAKGGISNQLFVSRYQLYLPDPEVLKQELKRLLSVNDG
SIO_010081: NPUN_RS37250
subclass of: SO_0000673
so part of: NPUN_RS37250
location: complement(24266..25282)
location: region:24266-25282:-1
so has part: feature:24266-25282:-1:exon

WP_012412844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24266-25282:-1:exon

NPUN_RS37255
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37255
old locus tag: Npun_ER025
so part of: sequence
location: complement(25385..25660)
location: region:25385-25660:-1
so has part: feature:25385-25660:-1:exon
subclass of: SO_0000010

position:25385:-1
position: 25385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25660:-1
position: 25660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25385-25660:-1:exon

NPUN_RS37255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37255
old locus tag: Npun_ER025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015214264.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAEVKKSQKLSLRPGVQKTPVKDEAAAWVESRNAAETPSTTGTEEVNNGKSKRVTFEVTEAQHQEIKIRATKKGMTIKEYMIALVEEELKS
SIO_010081: NPUN_RS37255
subclass of: SO_0000673
so part of: NPUN_RS37255
location: complement(25385..25660)
location: region:25385-25660:-1
so has part: feature:25385-25660:-1:exon

WP_012412845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25385-25660:-1:exon

NPUN_RS37260
type: Gene
subclass of: SO_0000704
RO_0002162: 63737
locus tag: NPUN_RS37260
old locus tag: Npun_ER026
so part of: sequence
location: complement(25647..26297)
location: region:25647-26297:-1
so has part: feature:25647-26297:-1:exon
subclass of: SO_0000010

position:25647:-1
position: 25647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26297:-1
position: 26297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25647-26297:-1:exon

NPUN_RS37260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 63737
locus tag: NPUN_RS37260
old locus tag: Npun_ER026
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015214263.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MKIAVLNQKGGSGKTTVSIHLAHAFSMIGYRVLLVDTDPQGSTRDWAAARNGEAPFSVIGLDRPILHKELPKLAQGYDFVFIDGAPRVSDLTRSAIMAVDFVLVPVQPSPLDVWAVHEVVELVQEATIYKPDLTAAFLINRKIANTALGREVTEVLGEYPFPVLKAQISQRVAFAECLNIGSTVLEAAPKSAASDEVRAVVEEILEAREETNHGRS
SIO_010081: NPUN_RS37260
subclass of: SO_0000673
so part of: NPUN_RS37260
location: complement(25647..26297)
location: region:25647-26297:-1
so has part: feature:25647-26297:-1:exon

WP_012412846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25647-26297:-1:exon