Bartonella grahamii as4aup plasmid pBGR3, complete sequence.
type: Entry
definition: Bartonella grahamii as4aup plasmid pBGR3, complete sequence.
sequence version: NC_012847.1
sequence date: 2023-03-12
sequence: sequence
division: CON
label: NC_012847.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02603206
keyword: RefSeq
source: Bartonella grahamii as4aup
organism: Bartonella grahamii as4aup
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Bartonellaceae; Bartonella.
reference: 1
references: 19578403
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP001563.1.\nBacteria available from Siv Andersson, siv.andersson@ebc.uu.se.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/12/2023 11:07:28\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 2,015\nCDSs (total) :: 1,963\nGenes (coding) :: 1,885\nCDSs (with protein) :: 1,885\nGenes (RNA) :: 52\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 42\nncRNAs :: 4\nPseudo Genes (total) :: 78\nCDSs (without protein) :: 78\nPseudo Genes (ambiguous residues) :: 0 of 78\nPseudo Genes (frameshifted) :: 47 of 78\nPseudo Genes (incomplete) :: 41 of 78\nPseudo Genes (internal stop) :: 28 of 78\nPseudo Genes (multiple problems) :: 27 of 78\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 28192
topology: circular
so has quality: SO_0000988
location: 1..28192
location: region:1-28192:1
RO_0002162: 634504

NC_012847
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02603206
type: BioSample
SIO_000068: biosample

1
title: Run-off replication of host-adaptability genes is associated with gene transfer agents in the genome of mouse-infecting Bartonella grahamii
author: Berglund, E.C.
author: Frank, A.C.
author: Calteau, A.
author: Vinnere Pettersson, O.
author: Granberg, F.
author: Eriksson, A.S.
author: Naslund, K.
author: Holmberg, M.
author: Lindroos, H.
author: Andersson, S.G.
journal: PLoS Genet 5 (7), e1000546 (2009)
pubmed: 19578403

19578403
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Berglund, E.C.
author: Frank, A.C.
author: Calteau, A.
author: Vinnere Pettersson, O.
author: Granberg, F.
author: Eriksson, A.-S.
author: Naslund, K.
author: Holmberg, M.
author: Lindroos, H.
author: Andersson, S.G.E.
journal: Submitted (26-MAR-2009) Department of Molecular Evolution, Uppsala University, Norbyvagen 18C, Uppsala 75236, Sweden

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28192:1
position: 28192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-28192:1:source
so part of: sequence
organism: Bartonella grahamii as4aup
mol type: genomic DNA
strain: as4aup
plasmid: pBGR3

634504
type: Taxonomy
SIO_000068: taxonomy

BGR_RS09890
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09890
old locus tag: Bgr_p00010
so part of: sequence
location: 226..477
location: region:226-477:1
so has part: feature:226-477:1:exon
subclass of: SO_0000010

position:226:1
position: 226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477:1
position: 477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226-477:1:exon

BGR_RS09890
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09890
old locus tag: Bgr_p00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005774741.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSLTVTAKGQITLKRDLLQHLGVKPGEKIDFDKLPGGELRIKASQPTSTIESFIGRFSGKLKKPLTIEEMNEITASSWAGKK
SIO_010081: BGR_RS09890
subclass of: SO_0000673
so part of: BGR_RS09890
location: 226..477
location: region:226-477:1
so has part: feature:226-477:1:exon

WP_004857201.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:226-477:1:exon

BGR_RS09895
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09895
old locus tag: Bgr_p00020
so part of: sequence
location: 474..872
location: region:474-872:1
so has part: feature:474-872:1:exon
subclass of: SO_0000010

position:474:1
position: 474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872:1
position: 872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474-872:1:exon

BGR_RS09895
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09895
old locus tag: Bgr_p00020
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007348006.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKISVDTNVLARAVLQDDKKQGEVASKILREASLIAISLPCLCELVWILRRGARLSKEDVAGMLRDLLATSNIVMNRPAVEAGLAILEAGGDFADGIISYEGNWLGGETFVSFDKLAIDLLKKNGQLVKLLT
SIO_010081: BGR_RS09895
subclass of: SO_0000673
so part of: BGR_RS09895
location: 474..872
location: region:474-872:1
so has part: feature:474-872:1:exon

WP_004861352.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474-872:1:exon

BGR_RS09900
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09900
old locus tag: Bgr_p00030
so part of: sequence
location: complement(1094..1747)
location: region:1094-1747:-1
so has part: feature:1094-1747:-1:exon
subclass of: SO_0000010

position:1094:-1
position: 1094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747:-1
position: 1747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1094-1747:-1:exon

BGR_RS09900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09900
old locus tag: Bgr_p00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004857191.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MPKFYAYLRVSRDGQDTENQKFGLLEYANKNGFAPLHIEEEIASRGKDWRKRKLGALIEKAECGDVLLTPEFSRIAGSSLAVLEILKAASERGLIVHITKQNLIMDGSLQSDIIANVLGMVSQIERHLIQTRTKESLSVARQRGIKLGRPKGSIATKLKLDSHIDEIQAFINVGLSQSRIAKTLGVSVNTLRLFIERKNIKLTKIKPIITMPRTLEN
SIO_010081: BGR_RS09900
subclass of: SO_0000673
so part of: BGR_RS09900
location: complement(1094..1747)
location: region:1094-1747:-1
so has part: feature:1094-1747:-1:exon

WP_012755104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1094-1747:-1:exon

BGR_RS09905
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09905
old locus tag: Bgr_p00040
so part of: sequence
location: complement(1920..2375)
location: region:1920-2375:-1
so has part: feature:1920-2375:-1:exon
subclass of: SO_0000010

position:1920:-1
position: 1920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2375:-1
position: 2375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1920-2375:-1:exon

BGR_RS09905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09905
old locus tag: Bgr_p00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017196502.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: nucleotide-binding protein
translation: MPKIFIVYNNHTILEQTERVLFKLGLEPYVLKFGSDDLTTIEDFKQEISMQTNSPKFGIVLLTPDDIGYAKSADKKDAQPRANQNVIFKMGMLFPKISCRNIAILKKRDVEVPSDYEGINYIPFNEHVKETLPKIVELLNTAGFNLDTVNY
SIO_010081: BGR_RS09905
subclass of: SO_0000673
so part of: BGR_RS09905
location: complement(1920..2375)
location: region:1920-2375:-1
so has part: feature:1920-2375:-1:exon

WP_012755105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1920-2375:-1:exon

BGR_RS11240
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS11240
so part of: sequence
location: complement(2421..2570)
location: region:2421-2570:-1
so has part: feature:2421-2570:-1:exon
subclass of: SO_0000010

position:2421:-1
position: 2421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2570:-1
position: 2570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2421-2570:-1:exon

BGR_RS11240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS11240
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLNHDDIESVEFYFTVNGKQIKFDKETNDKLKENIDWEKFLSQLFVDKE
SIO_010081: BGR_RS11240
subclass of: SO_0000673
so part of: BGR_RS11240
location: complement(2421..2570)
location: region:2421-2570:-1
so has part: feature:2421-2570:-1:exon

WP_187147397.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2421-2570:-1:exon

BGR_RS09910
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
gene: repC
locus tag: BGR_RS09910
old locus tag: Bgr_p00050
so part of: sequence
location: complement(3073..4410)
location: region:3073-4410:-1
so has part: feature:3073-4410:-1:exon
subclass of: SO_0000010

position:3073:-1
position: 3073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4410:-1
position: 4410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3073-4410:-1:exon

BGR_RS09910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
gene: repC
locus tag: BGR_RS09910
old locus tag: Bgr_p00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007348001.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein RepC
translation: MVKKTSGRKLTSKHWEYIKIADNTDIGHISRSQLIFLVQELPIIGLIKGTEVHLLTKLLNTVPVAHFEKGKLPIVFKSNHQIGLEIGCTSVHVSRLLSRLFDKGLIVMRDSGNYKRYSFNSANYVQIACGIDLSILIARYHELKHSILTIKEEKKHHDMVVRTFCGVCRRLQLRIEEIKFTSMASMFLNRMNKIKSVLGSPFKASTFKLEKAIKLFNRLLDRLFFTKMLCTNNKNVMQLHNTTPNYNCNCNKNECSDNSEHTQIVNVTSGHDKMAYENIEKGKTETLLPSKGSTLPQIKPEILEKALPNAAVFSECSLQTESDLIRSMYPMYRMIKVSEHAAEQATKIMGLKKTALAIAIIFEKYARGLVKSPGGYLRGMIDKEKKGELYLERSLFALLKQVDQEEINSLNLEKKQKIKINEEKSSLFEFELNKTLNDLTMSKFT
SIO_010081: BGR_RS09910
subclass of: SO_0000673
so part of: BGR_RS09910
location: complement(3073..4410)
location: region:3073-4410:-1
so has part: feature:3073-4410:-1:exon

WP_012755106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3073-4410:-1:exon

BGR_RS09915
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09915
old locus tag: Bgr_p00060
so part of: sequence
location: 5269..5619
location: region:5269-5619:1
so has part: feature:5269-5619:1:exon
subclass of: SO_0000010

position:5269:1
position: 5269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5619:1
position: 5619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5269-5619:1:exon

BGR_RS09915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09915
old locus tag: Bgr_p00060
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005774644.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MENMNNSFSCEHILPKTTLPNTQKKWLTAALMLFIAFIALSEPAFAAGGFGKIESALQKIIEALTGNIARSIATIAIAGIGIAWIAGYVEMRKAFFVCIGIGIIFGAPQIASMFYS
SIO_010081: BGR_RS09915
subclass of: SO_0000673
so part of: BGR_RS09915
location: 5269..5619
location: region:5269-5619:1
so has part: feature:5269-5619:1:exon

WP_012755107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5269-5619:1:exon

BGR_RS09920
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09920
old locus tag: Bgr_p00070
so part of: sequence
location: 5638..5961
location: region:5638-5961:1
so has part: feature:5638-5961:1:exon
subclass of: SO_0000010

position:5638:1
position: 5638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5961:1
position: 5961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5638-5961:1:exon

BGR_RS09920
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09920
old locus tag: Bgr_p00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015856920.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB3
translation: MKEHDKLTEDTLFLACTRPAMIAGVTVEAMGLNAIGTMILFIMTGNIFLVTIGIAMHFIFKEILKHDHNKFRILLTWQKTSIFARNSSLWGGGSISPLRLIRNYEEL
SIO_010081: BGR_RS09920
subclass of: SO_0000673
so part of: BGR_RS09920
location: 5638..5961
location: region:5638-5961:1
so has part: feature:5638-5961:1:exon

WP_012755108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5638-5961:1:exon

BGR_RS09925
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09925
old locus tag: Bgr_p00080
so part of: sequence
location: 5961..8321
location: region:5961-8321:1
so has part: feature:5961-8321:1:exon
subclass of: SO_0000010

position:8321:1
position: 8321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5961-8321:1:exon

BGR_RS09925
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09925
old locus tag: Bgr_p00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012755109.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB4 family type IV secretion/conjugal transfer ATPase
translation: MNAAQSKREKQPEAIIPYVRHVNKHIIALDSRALMSIIKLEGINFETADIIDLNVLHEQLNNLFKNIADERIALYSHIIRKRETVYPDGTFRSVFAKQLDDKYRERMVSQELYRNDLYLSILWNPHVDQTDKLVEFFKRLGKAKQEKTEADAESIRKLEDITTDLIQNLERYGAKRLSLYEHEGNIYSQQSEFIHQLVGGRRERIPLTWGTIASTVYSDRLIFGKEIIEIRYEAEQRFAGMFGWKEYPAKTRVGMADGLLTLPFEFIFTQSFVFKSKNIAKQIMGRKQNQMVNAGDRAGSQIMELDDALDDLESNRFVLGEHHLSLAVFADTPQELADNLAKARSHLTNGGAVIAREDLGLAAAWWAQLPGNYAYRTRSGAITSRNYAALSPFHSFPVGKIDGNVWGPAVALMKTSAGSPFYFNFHFGDLGNTFVCGPSGSGKTVIVNFLLAQLQKHDPNMVFFDKDRGAELFVRAGGGTYMPLKNGKPTGIAPLKGLDYNNPADRVFLRQWIIKLVSSEDQKISESERQDITAAVEQLALLPKEQRTISALQMFFDTTHREGISGRLERWCKGNALGWVFDNPDDDIGIDAKFIGYDMTDFLDNDEIRPPLMMYLFHRILSLIDGRRIIIVIDEFWKALEDDSFKAFAQDRLKTIRKQNGLMLFATQSPKDAINSTIAHTIIEQCPTQIYFPNQKGNHGDYVEGFKLSDREFNLIQSELSRESRRFLIKQGQSSVVAELNLRGFDNEIAILSGTTKNIELLETIMDEVGESPEKWLPIFQERSKQ
SIO_010081: BGR_RS09925
subclass of: SO_0000673
so part of: BGR_RS09925
location: 5961..8321
location: region:5961-8321:1
so has part: feature:5961-8321:1:exon

WP_012755109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5961-8321:1:exon

BGR_RS09930
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09930
old locus tag: Bgr_p00090
so part of: sequence
location: 8318..9073
location: region:8318-9073:1
so has part: feature:8318-9073:1:exon
subclass of: SO_0000010

position:8318:1
position: 8318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9073:1
position: 9073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8318-9073:1:exon

BGR_RS09930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09930
old locus tag: Bgr_p00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004861385.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKKLLLATALCAASFGFQTNAFAIMVYDPAAVGQIMKQVQQGTQQLNKLQEQIQQGKQQLDQLKSQLDQAKQLYSSLNGKPDLSALQELLNKQGNNAALPSDFNHLEQSIDGTGGGSGNTEKWKEKLLYKEPSGGSGSKEAVDAFYKQEVEKLHNRNVGQAATGQAVYEDADKKKEAISKIIEKLKNAKTAAEVQDAQTQLAAIQAILQAEALQTQATSMIQQAQSEAEAIRIREEASKRYQDYANQLRGH
SIO_010081: BGR_RS09930
subclass of: SO_0000673
so part of: BGR_RS09930
location: 8318..9073
location: region:8318-9073:1
so has part: feature:8318-9073:1:exon

WP_012755110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8318-9073:1:exon

BGR_RS09935
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09935
old locus tag: Bgr_p00100
so part of: sequence
location: 9095..9430
location: region:9095-9430:1
so has part: feature:9095-9430:1:exon
subclass of: SO_0000010

position:9095:1
position: 9095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9430:1
position: 9430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9095-9430:1:exon

BGR_RS09935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09935
old locus tag: Bgr_p00100
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012755111.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: EexN family lipoprotein
translation: MNKIIITTLLLCTGLITGGCEKTYSVEEFKKNENLLKEWAVRCGFTGNSKNCQNARLADHQIHEERRAKIDEENRKRREEFEKKQQEEEAKRKAEYEKRRAQQKRDNNFDP
SIO_010081: BGR_RS09935
subclass of: SO_0000673
so part of: BGR_RS09935
location: 9095..9430
location: region:9095-9430:1
so has part: feature:9095-9430:1:exon

WP_012755111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9095-9430:1:exon

BGR_RS09940
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09940
old locus tag: Bgr_p00110
so part of: sequence
location: 9491..10420
location: region:9491-10420:1
so has part: feature:9491-10420:1:exon
subclass of: SO_0000010

position:9491:1
position: 9491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10420:1
position: 10420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9491-10420:1:exon

BGR_RS09940
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09940
old locus tag: Bgr_p00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004861390.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MVTKDIFTMIDQRLMKALTDIMDKTISNLSGALSVPLQSACIIYIAFIGYNIMYGRSSMPLWDFIATTFKLGIIVTLTTRAANYNTWVTNIFFTDLPNAISNATQGAVSDKNVWDNMIQNAYAHAFDAANKYNGWTEVGTYIVNWIAGLFCLIISGLFCTIGFIVTIFAKFGSFLVISVGPIFIGFGLFSATRRFTEAWLGQLANFIILQVLVVLLGNVYVSLAMDILSGDLTDIMFSVLQFLVIGIGGIYLFIHLPGIASALASGGAALAGSTHLAHHSSRAAGRGALATARSGVSGLRGLASKFRGG
SIO_010081: BGR_RS09940
subclass of: SO_0000673
so part of: BGR_RS09940
location: 9491..10420
location: region:9491-10420:1
so has part: feature:9491-10420:1:exon

WP_012755112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9491-10420:1:exon

BGR_RS09945
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09945
old locus tag: Bgr_p00120
so part of: sequence
location: 10429..10716
location: region:10429-10716:1
so has part: feature:10429-10716:1:exon
subclass of: SO_0000010

position:10429:1
position: 10429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10716:1
position: 10716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10429-10716:1:exon

BGR_RS09945
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09945
old locus tag: Bgr_p00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005774630.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRGFKKIGIILPFLFLSGCMSSPNTLKSLPKCDGYSKRPLNRSMWNWEGKKPTPRPIIISGNTQSSVKESKLETLLAQKLTDEEMKSYKNCGQKA
SIO_010081: BGR_RS09945
subclass of: SO_0000673
so part of: BGR_RS09945
location: 10429..10716
location: region:10429-10716:1
so has part: feature:10429-10716:1:exon

WP_012755113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10429-10716:1:exon

BGR_RS09950
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09950
old locus tag: Bgr_p00130
so part of: sequence
location: 10713..11384
location: region:10713-11384:1
so has part: feature:10713-11384:1:exon
subclass of: SO_0000010

position:10713:1
position: 10713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11384:1
position: 11384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10713-11384:1:exon

BGR_RS09950
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09950
old locus tag: Bgr_p00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015856929.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB8/TrbF family protein
translation: MKENAVEQYIAEARSFDQDRMLASRRTTRVSLAIAGIAVAVAIMSSLAVITLTPLKTVEPFVIRVDNSTGITEVVEALKEGPTNVDEAITRYFAAKYVRFREGFVVEETQNNFETISLLSSPEERERFAGWYGAKNPQSPQILYKHATVTITIKSISFINENVAQVRYYRTVRNNDNNKEFITHWVATLTFEYTNAPISVQNRLINPLGFIVNEYRTDPEVVN
SIO_010081: BGR_RS09950
subclass of: SO_0000673
so part of: BGR_RS09950
location: 10713..11384
location: region:10713-11384:1
so has part: feature:10713-11384:1:exon

WP_012755114.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10713-11384:1:exon

BGR_RS09955
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
gene: virB9
locus tag: BGR_RS09955
old locus tag: Bgr_p00140
so part of: sequence
location: 11387..12241
location: region:11387-12241:1
so has part: feature:11387-12241:1:exon
subclass of: SO_0000010

position:11387:1
position: 11387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12241:1
position: 12241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11387-12241:1:exon

BGR_RS09955
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
gene: virB9
locus tag: BGR_RS09955
old locus tag: Bgr_p00140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005775234.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein VirB9
translation: MTKKILFLILRITVAFSLTNISYASVFPTRAPSDSRIRFINYDAYNVTKIIGSIRSSVQIEFSPNEEIAHVAIGNSVAWEVAPAGNILFLKAREVQPITNLQVVTTKLDGSKRSYQFELTIKDGEISSGQETYFLVKFRYPQEEAEQRRLAALMRQEKQQAQRIDNVFNASETYGPRNWAYTAQGSSVLEPASVYDNGKTTTFTFPDNQEIPAIYIVSNDDTESLVPKTTRGNMVIVHAISARFTLRQGKNVLCVFNEAYQPKGTNPNTGTTSPAVERKIASDL
SIO_010081: BGR_RS09955
subclass of: SO_0000673
so part of: BGR_RS09955
location: 11387..12241
location: region:11387-12241:1
so has part: feature:11387-12241:1:exon

WP_012755115.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11387-12241:1:exon

BGR_RS09960
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
gene: virB10
locus tag: BGR_RS09960
old locus tag: Bgr_p00150
so part of: sequence
location: 12269..13384
location: region:12269-13384:1
so has part: feature:12269-13384:1:exon
subclass of: SO_0000010

position:12269:1
position: 12269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13384:1
position: 13384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12269-13384:1:exon

BGR_RS09960
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
gene: virB10
locus tag: BGR_RS09960
old locus tag: Bgr_p00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005775233.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein VirB10
translation: MSDKPIIEDRGSIGDGKNNTSKSDTKKIIIIIAFVGFCAYVLWNIFSTQPTQKNTANIHKKQDFNNSVAPLELVSAESQAKIAPITLPSPTDPPEKTVEHDPLLDAAQRAPVLAFTSNTHPSSTQMPRNNYSNNISETPNNDSQSFSSLLKPTKIEGTRAGIMGDRNFIIAMGTSIPCILETALNSDQPGFASCIINRDILSDNGRVVLLDKGTQVVGEYRGGLKKGQSRLFVLWTRAKTPTGVIINLASPATDSLGRAGFDGNVNTHWWERFSSALLLTVVDSITTNLTNKKKGNSNSGGGFNSSEASNIGKDTATVALENQINIPPTLEKFQGELVNIFVARDLDFSSVYKLVVKSKRNRSTPSYSFFH
SIO_010081: BGR_RS09960
subclass of: SO_0000673
so part of: BGR_RS09960
location: 12269..13384
location: region:12269-13384:1
so has part: feature:12269-13384:1:exon

WP_012755116.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12269-13384:1:exon

BGR_RS09965
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
gene: virB11
locus tag: BGR_RS09965
old locus tag: Bgr_p00160
so part of: sequence
location: 13402..14454
location: region:13402-14454:1
so has part: feature:13402-14454:1:exon
subclass of: SO_0000010

position:13402:1
position: 13402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14454:1
position: 14454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13402-14454:1:exon

BGR_RS09965
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
gene: virB11
locus tag: BGR_RS09965
old locus tag: Bgr_p00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004857222.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MPSAKNAERASIVLTKLKILDDFLNDENLFEIVVNRPGEVIVEGPNGWQTHILKELTYSELEGIAKVVAAYTTQKISVENPVLSATLPNNERIQIVMPPAVAANTISMTIRKPSSRTFSLESLHENNLFSVAQNTSFTPTQQMTERLSELSDTDKELTDLFIAKDFCTFLERAVITQQNILISGKTGSGKTTLSKALIAKIPEYERILTIEDTPELVVPHSNKVQLFYSKDNQGLAKAGAKELLESGLRMRPDRILLQELRDGTAFYYIRNVNSGHPGSITTVHASTALAAFEQMTLLVKESDGGGNLARDDIRGLLISMIDVIIQCKRLEGKFRVTEIYYDPFKRRDAF
SIO_010081: BGR_RS09965
subclass of: SO_0000673
so part of: BGR_RS09965
location: 13402..14454
location: region:13402-14454:1
so has part: feature:13402-14454:1:exon

WP_012755117.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13402-14454:1:exon

BGR_RS09970
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09970
old locus tag: Bgr_p00170
so part of: sequence
location: complement(14509..14727)
location: region:14509-14727:-1
so has part: feature:14509-14727:-1:exon
subclass of: SO_0000010

position:14509:-1
position: 14509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14727:-1
position: 14727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14509-14727:-1:exon

BGR_RS09970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09970
old locus tag: Bgr_p00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005864571.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MSVAVDSKDVVRANIDKKLKKEAGEILASLGLTVSDFIRISLAKVVDERGLPFDMSVSNAETLKTFEKSKKG
SIO_010081: BGR_RS09970
subclass of: SO_0000673
so part of: BGR_RS09970
location: complement(14509..14727)
location: region:14509-14727:-1
so has part: feature:14509-14727:-1:exon

WP_012755118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14509-14727:-1:exon

BGR_RS09975
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09975
old locus tag: Bgr_p00180
so part of: sequence
location: complement(14806..16329)
location: region:14806-16329:-1
so has part: feature:14806-16329:-1:exon
subclass of: SO_0000010

position:14806:-1
position: 14806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16329:-1
position: 16329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14806-16329:-1:exon

BGR_RS09975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09975
old locus tag: Bgr_p00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015856933.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Fic family protein
translation: MKYENTNDPYTDPKTGVMYNRLGIKDKATLRSMESAFAYIRSYELDSTPIRGKFDLNHMKDIHKKLFGDVYEWAGEIRSIDITKGGCLFAYHHQIESYAPKITQQLAKEQYLRGLDADEFSQRAGYYMGEINALHPFREGNGRTQREFIGQLACEAGYNINWDGITREEMTKASIEALYGTSELLSELIRKNLTEFTKNREIDVYQGLGEKIYSYIETNKELSQKQKEKITTLLENTKTAFGRFEKEDPKIEQSQKDLNVASKTTEKAPYLAAYTDNSNLEQKVLSALRNKKSYVDMFKKLNSRLASIYKDPQEAALRIEQTILAGKGDKLPDILAKSPERAGELRGSDRLIDKLKSTGKERKEALYNVPLAVSTMRALQSFYKNSYETHMDSFTREREQLKVEVPSLSQEAVTFMKNVEAGRESYSKIPEQVNKEFSKLQSALDKRFGQDAIHKQDFDLSKAIPQNQSPDKKLMSEFQTAVKFLQQRHTQELKNVIAQTKSKDVTR
SIO_010081: BGR_RS09975
subclass of: SO_0000673
so part of: BGR_RS09975
location: complement(14806..16329)
location: region:14806-16329:-1
so has part: feature:14806-16329:-1:exon

WP_244395853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14806-16329:-1:exon

BGR_RS09980
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09980
old locus tag: Bgr_p00190
so part of: sequence
location: complement(16319..16507)
location: region:16319-16507:-1
so has part: feature:16319-16507:-1:exon
subclass of: SO_0000010

position:16319:-1
position: 16319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16507:-1
position: 16507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16319-16507:-1:exon

BGR_RS09980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09980
old locus tag: Bgr_p00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006590446.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin VbhA family protein
translation: MLSEDEIKRRRFAAKNALASQRLEGLEPDSKVVEQMERVIIGELETSDVIKDLMERIKRGEV
SIO_010081: BGR_RS09980
subclass of: SO_0000673
so part of: BGR_RS09980
location: complement(16319..16507)
location: region:16319-16507:-1
so has part: feature:16319-16507:-1:exon

WP_012755120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16319-16507:-1:exon

BGR_RS09985
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
gene: traA
locus tag: BGR_RS09985
old locus tag: Bgr_p00200
so part of: sequence
location: complement(16578..20288)
location: region:16578-20288:-1
so has part: feature:16578-20288:-1:exon
subclass of: SO_0000010

position:16578:-1
position: 16578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20288:-1
position: 20288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16578-20288:-1:exon

BGR_RS09985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
gene: traA
locus tag: BGR_RS09985
old locus tag: Bgr_p00200
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019223231.1
GO function: GO:0005524 - ATP binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer relaxase TraA
translation: MASTHLQAKIIGAGKSAISAAAYRHRTRMFDELEGSHTHRYDKDRDLVHSEMNIPEGSPKWITQQLSYFDTNDKKSEWLWNTVQNSERVNGQLAREIVIALPLELSRDQNISLVRDFVKENFSSRGLVSDWVYHDKEGNPHVHIMHTLRPVLENGFGPKKIAVLNEDGTVKKSLVTIRDRQGNAIRKEERIVYENVIGHKDALKDLRNSWGDIATRHLTFAGYDIKVDMRSYKERGLSIEPTIHLGQSAHAMSKKGLASNAVQANEKIKQRSVEKIKENPNEVLKLISFEKSTFNRGDLAKIINRYVDNANDFNDIMVRLEQSNNLIKIKDHSNPHKVIYSTKEILKTEYDMERSVVSLSQTTGHGVKDRQVLEAIKSVENKDKSNRFKFSEEQKLAVQHITDDKGIAAVVGYAGAGKSTLLEAANIAWVNSGKRVFGAALAGKAAEGLEESSKIKSKTLAAWELAWKNKKDELRVGDVFVIDEAGMVSSKQLSHFVQKVEKAGAKIVLVGDNMQLQPIEAGAAFRAVVDNIGYVELSGIRRQKEEWGQDASRQFARGQVKEALDHYKNRGFVRETKTRDQAINTLVKDWMNTRRKVEQKCEEEGKTLRGDELLVLAHTNASVKKLNEEIRTALKDARLLKSEDSASVTNFDTLRGHREFVVGDRIIFLENAQFEERYATELGKQKVKNGMLGTVLSTQNERGKPLLKVRLDSGQEVVFSNQTYQNVDHGYAATVHKSQGVTVDNVFVLASSSMDQHLSYVAMSRHRHQSHLYVAEEDFKNVRLHEHKQVKGTITGELVEAGYDSFSETAKTKTPYADIATFRGIERVYGVNLPSAIDGARIELGDKISLRQDKETIVVNNKEIKRNIFNVDLIERGDPSFVGAIKQSDRANTYEKLVAALSRSGVKTTTLDFSESPDYRDYIAKFTKNRGIDISQGLGEKIASYVDFNKEWLQKQKETIESLWDRAKTSFSKLQKEDPKVEQSQKELNVASKTTEKAPYLAAYTDNSNLEQKVLSALRNKKSYVDMFKKLNSRLASIYKDPQEAALRIEQTILAGKGDKLPDILAKSPERAGELRGSDRLIDKLKSTGRERKEALYNVPLAVSTMRALQSFYKNSYETHMDSFTREREQLKVEVPSLSQEAVTFMKNVEAGRDSYSKIPEQVNKEFSKLQSALDKRFGQDAIHKQDFDLSKVIPQNQPPDKKLMSEFQTAVKFLQQRQQEQINAIARERSKDVIR
SIO_010081: BGR_RS09985
subclass of: SO_0000673
so part of: BGR_RS09985
location: complement(16578..20288)
location: region:16578-20288:-1
so has part: feature:16578-20288:-1:exon

WP_012755121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16578-20288:-1:exon

BGR_RS09990
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09990
old locus tag: Bgr_p00210
so part of: sequence
location: 20525..20728
location: region:20525-20728:1
so has part: feature:20525-20728:1:exon
subclass of: SO_0000010

position:20525:1
position: 20525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20728:1
position: 20728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20525-20728:1:exon

BGR_RS09990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09990
old locus tag: Bgr_p00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004861324.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TraC family protein
translation: MEEKKALEEKSKKLLERIKAAKKQEGEKIALLAAEAGLTELNITNDQWKNIFEEIKDRFQKEQQKTE
SIO_010081: BGR_RS09990
subclass of: SO_0000673
so part of: BGR_RS09990
location: 20525..20728
location: region:20525-20728:1
so has part: feature:20525-20728:1:exon

WP_244395854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20525-20728:1:exon

BGR_RS09995
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS09995
old locus tag: Bgr_p00220
so part of: sequence
location: 20781..21005
location: region:20781-21005:1
so has part: feature:20781-21005:1:exon
subclass of: SO_0000010

position:20781:1
position: 20781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21005:1
position: 21005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20781-21005:1:exon

BGR_RS09995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS09995
old locus tag: Bgr_p00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019223233.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: conjugal transfer protein TraD
translation: MSDEIRRKDAREKIILGGLVVKAGLKNADKSFILGCLIHAAKLDINSNEYKNLQKIGQHSFTDTRGQNDKQSRS
SIO_010081: BGR_RS09995
subclass of: SO_0000673
so part of: BGR_RS09995
location: 20781..21005
location: region:20781-21005:1
so has part: feature:20781-21005:1:exon

WP_012755123.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20781-21005:1:exon

BGR_RS10000
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
gene: traG
locus tag: BGR_RS10000
old locus tag: Bgr_p00230
so part of: sequence
location: 20983..22896
location: region:20983-22896:1
so has part: feature:20983-22896:1:exon
subclass of: SO_0000010

position:20983:1
position: 20983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22896:1
position: 22896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20983-22896:1:exon

BGR_RS10000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
gene: traG
locus tag: BGR_RS10000
old locus tag: Bgr_p00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012755124.1
GO component: GO:0016020 - membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Ti-type conjugative transfer system protein TraG
translation: MINNLDRKQIIFLICPFLFSIIILFLVNITINNITENGTTQDAYWFVRSKPLDILVLIALSCSSFILLQKRHIRKNITIASLISFCLFAAYYSINEYIRLSPYVGQNNMTWADVFPFFDRMVLSGSIIGIIILGFTMNLSLPKTSPLKKLKNTIFGGAQWMNIKQLEKIFPSDGEIVIGERYRVDEDVVKDVQFNPNDKTTWGKGGSQPLLTYKLDFDSTHMLFFAGSGGYKTTSNVIPTCLKYSGPLIVFDPSTEIAPIVEDAREKLNKNTVHVLAPHGTSTKTFNPLDWLLDESIPAYEREAGLVEIARLLLSENYKSTSTDQFFVSHAHNLLTGLLAHIVFSDEYKLEEKNLKTLRMIVSEPEPSVIGKLQSIQSSSSSQFIRETLGVFTNMAPQTFSGVYATASKDTQWLSLDNYANLISGDDFKTTDIAKENIDIFLNIPSKILKSYPGVGRILVGSLLKAMEAANGNYKKRVLFVLDEIDLLGYMNILEEARDRGRKYGISLMLFYQSVGQLERHFGSSGTMAWLESCAFVSYAAIKDIKTAENISKACGKMTVEVKNSRKPQGAFHTRGTENVNTQQRPLIYPHEITQEMRKDEQIILMQGQPPIRCGRAIYFRRKDLRALANKNRFAPK
SIO_010081: BGR_RS10000
subclass of: SO_0000673
so part of: BGR_RS10000
location: 20983..22896
location: region:20983-22896:1
so has part: feature:20983-22896:1:exon

WP_012755124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20983-22896:1:exon

BGR_RS10005
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS10005
old locus tag: Bgr_p00240
so part of: sequence
location: 23274..23729
location: region:23274-23729:1
so has part: feature:23274-23729:1:exon
subclass of: SO_0000010

position:23274:1
position: 23274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23729:1
position: 23729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23274-23729:1:exon

BGR_RS10005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS10005
old locus tag: Bgr_p00240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015398983.1
GO process: GO:0006260 - DNA replication [Evidence IEA]; GO:0006276 - plasmid maintenance [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication/maintenance protein RepL
translation: MSYLKGKNRFEKEWITMPQHPMAIIAKSNLNGYDLKVFFILASRLDFENLLVVNQTELAKKVGITRHHFNRSVKRLIAMDILLEGPRIGINRSYRLNPNLDWKGSAKNHKIALRENFKNRIKAAGIQGVYENSKPLEMDISNQIDLEDYLR
SIO_010081: BGR_RS10005
subclass of: SO_0000673
so part of: BGR_RS10005
location: 23274..23729
location: region:23274-23729:1
so has part: feature:23274-23729:1:exon

WP_244395855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23274-23729:1:exon

BGR_RS10010
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS10010
old locus tag: Bgr_p00250
so part of: sequence
location: 23964..24242
location: region:23964-24242:1
so has part: feature:23964-24242:1:exon
subclass of: SO_0000010

position:23964:1
position: 23964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24242:1
position: 24242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23964-24242:1:exon

BGR_RS10010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS10010
old locus tag: Bgr_p00250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012755126.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family
translation: MILGFKHKGLEAFYTTGTTKGIQSAHTQKLRRILGALDVAISPNDLNYPSFRLHPLKGDLKGYWSITVNGNWRVIFRFVGIDIELVDYLDYH
SIO_010081: BGR_RS10010
subclass of: SO_0000673
so part of: BGR_RS10010
location: 23964..24242
location: region:23964-24242:1
so has part: feature:23964-24242:1:exon

WP_012755126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23964-24242:1:exon

BGR_RS10015
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS10015
old locus tag: Bgr_p00260
so part of: sequence
location: 24260..24547
location: region:24260-24547:1
so has part: feature:24260-24547:1:exon
subclass of: SO_0000010

position:24260:1
position: 24260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24547:1
position: 24547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24260-24547:1:exon

BGR_RS10015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS10015
old locus tag: Bgr_p00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005864567.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HigA family addiction module antitoxin
translation: MMKNPPHPGELLREDVIVELGLSVTETAERLGMSRVAFSRVLNGKAAISPNLAIRLEMAGVSTARAWLAMQTNYDLAQALKQKQPKIHPLCTSSC
SIO_010081: BGR_RS10015
subclass of: SO_0000673
so part of: BGR_RS10015
location: 24260..24547
location: region:24260-24547:1
so has part: feature:24260-24547:1:exon

WP_005864567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24260-24547:1:exon

BGR_RS10020
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS10020
old locus tag: Bgr_p00270
so part of: sequence
location: complement(24597..24992)
location: region:24597-24992:-1
so has part: feature:24597-24992:-1:exon
subclass of: SO_0000010

position:24597:-1
position: 24597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24992:-1
position: 24992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24597-24992:-1:exon

BGR_RS10020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS10020
old locus tag: Bgr_p00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005864563.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MDTLSTNKLNKKEKNPNSKQSILITIMRRVFSIVYKILHKILKICLFSLFLFLLLIRKPVIILTEFIAGGSLLVLFIFFTGYVAGSAPFEHQTAMVIGYIVLIFLSLAVNWGYDTLLLRLAPPGSDLMLFK
SIO_010081: BGR_RS10020
subclass of: SO_0000673
so part of: BGR_RS10020
location: complement(24597..24992)
location: region:24597-24992:-1
so has part: feature:24597-24992:-1:exon

WP_012755127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24597-24992:-1:exon

BGR_RS10025
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS10025
old locus tag: Bgr_p00280
so part of: sequence
location: complement(25171..25839)
location: region:25171-25839:-1
so has part: feature:25171-25839:-1:exon
subclass of: SO_0000010

position:25171:-1
position: 25171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25839:-1
position: 25839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25171-25839:-1:exon

BGR_RS10025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS10025
old locus tag: Bgr_p00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007478073.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNAISKKYEFTNETKQVGDVTLYRIRALRDFGDVKAGDLGGFIEKEDNLSHDGNCWVGGDAWAFSYGRVYDNAIVCDDAIVCGHIYGNAHVCDKTRVYVGAHVYDNAHLSYNAWVYHHARVYGNAKLSGSARIHRNAEVYDHAVVSGAAKIYGKVYENASVGCHTKVYGSVYGNAKISGYFHISGNVYGNARIKRRSRFSFVPRNCEVYEGDNIVKTVAEVA
SIO_010081: BGR_RS10025
subclass of: SO_0000673
so part of: BGR_RS10025
location: complement(25171..25839)
location: region:25171-25839:-1
so has part: feature:25171-25839:-1:exon

WP_012755128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25171-25839:-1:exon

BGR_RS10030
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS10030
old locus tag: Bgr_p00290
so part of: sequence
location: 26691..27047
location: region:26691-27047:1
so has part: feature:26691-27047:1:exon
subclass of: SO_0000010

position:26691:1
position: 26691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27047:1
position: 27047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26691-27047:1:exon

BGR_RS10030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS10030
old locus tag: Bgr_p00290
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004857210.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MQNKTPHLNDISVGKKIRCRRKYMGISQEKLGKKIGVSFQQIQKYENGSNRVGAGRLQEIANILDVDISFFYTDISEKRNISYPYNEGLHSKEEYSLLKGFRKLKHKKQKAILWLVSE
SIO_010081: BGR_RS10030
subclass of: SO_0000673
so part of: BGR_RS10030
location: 26691..27047
location: region:26691-27047:1
so has part: feature:26691-27047:1:exon

WP_012755129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26691-27047:1:exon

BGR_RS10035
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS10035
old locus tag: Bgr_p00300
so part of: sequence
location: complement(27149..27466)
location: region:27149-27466:-1
so has part: feature:27149-27466:-1:exon
subclass of: SO_0000010

position:27149:-1
position: 27149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27466:-1
position: 27466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27149-27466:-1:exon

BGR_RS10035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS10035
old locus tag: Bgr_p00300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004857207.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTKRAEIVLPDLKNLQPFTKAQKVDEQELGKIGQNNGFTTRHSVETKRGSGRRKRSLKTARLTLALEPEVRDSFWSLADELNEDGGDFLNRLIENYVNNNYTQNK
SIO_010081: BGR_RS10035
subclass of: SO_0000673
so part of: BGR_RS10035
location: complement(27149..27466)
location: region:27149-27466:-1
so has part: feature:27149-27466:-1:exon

WP_012755130.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27149-27466:-1:exon

BGR_RS10040
type: Gene
subclass of: SO_0000704
RO_0002162: 634504
locus tag: BGR_RS10040
old locus tag: Bgr_p00310
so part of: sequence
location: complement(27463..28155)
location: region:27463-28155:-1
so has part: feature:27463-28155:-1:exon
subclass of: SO_0000010

position:27463:-1
position: 27463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28155:-1
position: 28155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27463-28155:-1:exon

BGR_RS10040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 634504
locus tag: BGR_RS10040
old locus tag: Bgr_p00310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005864560.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPVITMCSTKGGVGKSTMALVLANVFAKAGSKVKLIDADPNQPLVTWMKRSVDTMPKNIEVSGDITEQNIVSCIDDAVEQFPFVIVDLEGSANLAASFAIGRADLVLVPMRKKQLDGDQIGKIIALIKQQSQFFKREIPFRIVFSMTNTLNSREGQHIEKTLEKANLPILPASLTERGAFSALFQIGGSLFDLASSDVNNPQAAQENATVFANAVVKVLDNENLLKDKVA
SIO_010081: BGR_RS10040
subclass of: SO_0000673
so part of: BGR_RS10040
location: complement(27463..28155)
location: region:27463-28155:-1
so has part: feature:27463-28155:-1:exon

WP_012755131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27463-28155:-1:exon