Komagataeibacter medellinensis NBRC 3288 plasmid pGXY050, complete sequence.
Komagataeibacter medellinensis NBRC 3288
Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.
Complete genome sequence of NBRC 3288, a unique cellulose-nonproducing strain of Gluconacetobacter xylinus isolated from vinegar
Submitted (13-APR-2011) Contact:Director-General Department of Biotechnology National Institute of Technology and Evaluation, NITE Bioresource Information Center (NBIC), Department of Biotechnology; 2-49-10 Nishihara, Shibuya-ku, Tokyo 151-0066, Japan URL :http://www.bio.nite.go.jp/
REFSEQ INFORMATION: The reference sequence is identical to\nAP012164.1.\n\n\nThis work was done by Gluconacetobacter xylinus genome sequencing\nconsortium\nincluding Department of Microbiology and Immunology, Yamaguchi\nUniversity School of Medicine,\nNational Institute of Technology and Evaluation,\nGenetic Resources Technology, Faculty of Agriculture, Kyushu\nUniversity,\nDepartment of Biological Chemistry, Faculty of Agriculture,\nYamaguchi University and\nMizkan Group Corporation Central Research Institute.\n\nPlease visit our web site.\nURL:http://www.bio.nite.go.jp/\n\nDOGAN ; Database of Genomes Analyzed at NITE\nThe database contains genome sequence data, physical maps and the\ngenomic and proteomic data of the microorganisms analyzed.\nURL:http://www.bio.nite.go.jp/dogan/Top.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nGenome Coverage :: 8x\nSequencing Technology :: Sanger ABI3730\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/24/2022 02:25:10\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,378\nCDSs (total) :: 3,302\nGenes (coding) :: 3,172\nCDSs (with protein) :: 3,172\nGenes (RNA) :: 76\nrRNAs :: 5, 5, 5 (5S, 16S, 23S)\ncomplete rRNAs :: 5, 5, 5 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 4\nPseudo Genes (total) :: 130\nCDSs (without protein) :: 130\nPseudo Genes (ambiguous residues) :: 0 of 130\nPseudo Genes (frameshifted) :: 54 of 130\nPseudo Genes (incomplete) :: 105 of 130\nPseudo Genes (internal stop) :: 39 of 130\nPseudo Genes (multiple problems) :: 50 of 130\nCRISPR Arrays :: 3\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
type strain of Komagataeibacter medellinensis
COORDINATES: similar to AA sequence:RefSeq:WP_014106735.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_019092405.1
COORDINATES: similar to AA sequence:RefSeq:WP_003631001.1
COORDINATES: similar to AA sequence:RefSeq:WP_010505713.1
helix-turn-helix domain-containing protein
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_003630731.1
COORDINATES: similar to AA sequence:RefSeq:WP_003630730.1