Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae; Vitreoscilla.
Complete Genome Sequence of the cosmetic ferment Vitreoscilla filiformis (ATCC15551)
Submitted (13-JUL-2017) Biotechnologies, L'Oreal, 1 Avenue Eugene schueller, Aulnay-Sous-Bois 93600, France
REFSEQ INFORMATION: The reference sequence is identical to\nCP022424.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: MAR-2017\nAssembly Method :: other v. SMRT analysis v2.3.0\nExpected Final Version :: yes\nGenome Coverage :: 157.0x\nSequencing Technology :: Illumina HiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/30/2022 04:41:07\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,575\nCDSs (total) :: 3,509\nGenes (coding) :: 3,476\nCDSs (with protein) :: 3,476\nGenes (RNA) :: 66\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 3\nPseudo Genes (total) :: 33\nCDSs (without protein) :: 33\nPseudo Genes (ambiguous residues) :: 0 of 33\nPseudo Genes (frameshifted) :: 6 of 33\nPseudo Genes (incomplete) :: 28 of 33\nPseudo Genes (internal stop) :: 0 of 33\nPseudo Genes (multiple problems) :: 1 of 33\nCRISPR Arrays :: 9\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF012772.2
Derived by automated computational analysis using gene prediction method: Protein Homology.
GGDEF domain-containing phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_012346953.1
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: similar to AA sequence:RefSeq:WP_013793458.1
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015012410.1
GO:0004067 - asparaginase activity [Evidence IEA]
GO:0006528 - asparagine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012745981.1
amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012347708.1
COORDINATES: similar to AA sequence:RefSeq:WP_003068096.1
COORDINATES: similar to AA sequence:RefSeq:NP_250030.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014567.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011764182.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012909760.1
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010398973.1
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF019225.2
PEP-CTERM sorting domain-containing protein
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_003240342.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012348017.1
COORDINATES: protein motif:HMM:NF013235.2
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019430743.1
TetR/AcrR family transcriptional regulator
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012406360.1
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: similar to AA sequence:RefSeq:WP_012345451.1
COORDINATES: similar to AA sequence:RefSeq:WP_012345452.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006299227.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007861497.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0019632 - shikimate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011801055.1
COORDINATES: similar to AA sequence:RefSeq:WP_011482786.1
sugar phosphate isomerase/epimerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015834706.1
COORDINATES: similar to AA sequence:RefSeq:WP_009550275.1
COORDINATES: similar to AA sequence:RefSeq:WP_013863805.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009548783.1
GO:0008687 - 3,4-dihydroxyphenylacetate 2,3-dioxygenase activity [Evidence IEA]; GO:0008198 - ferrous iron binding [Evidence IEA]
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
3,4-dihydroxyphenylacetate 2,3-dioxygenase
COORDINATES: similar to AA sequence:RefSeq:WP_013538715.1
GO:0018480 - 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity [Evidence IEA]
GO:1901023 - 4-hydroxyphenylacetate catabolic process [Evidence IEA]
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_003819445.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009548780.1
COORDINATES: protein motif:HMM:NF018684.2
COORDINATES: protein motif:HMM:NF023560.2
COORDINATES: similar to AA sequence:RefSeq:WP_019578275.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
homoprotocatechuate degradation operon regulator HpaR
fibronectin type III domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_009552260.1
GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
alpha-D-glucose phosphate-specific phosphoglucomutase
COORDINATES: similar to AA sequence:RefSeq:WP_007849530.1
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010626550.1
COORDINATES: similar to AA sequence:RefSeq:WP_019449139.1
COORDINATES: similar to AA sequence:RefSeq:WP_004306939.1
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011870486.1
GO:0042242 - cobyrinic acid a,c-diamide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_011482590.1
COORDINATES: similar to AA sequence:RefSeq:WP_009857700.1
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011831812.1
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_004263395.1
GO:0030789 - precorrin-3B C17-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020203376.1
GO:0016722 - oxidoreductase activity, acting on metal ions [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]; GO:0032363 - FMN catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014006.2
COORDINATES: similar to AA sequence:RefSeq:WP_020157667.1
cobalamin biosynthesis central domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011793265.1
GO:0030788 - precorrin-2 C20-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008443340.1
GO:0046025 - precorrin-6Y C5,15-methyltransferase (decarboxylating) activity [Evidence IEA]
GO:0046140 - corrin biosynthetic process [Evidence IEA]
precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE
COORDINATES: similar to AA sequence:RefSeq:WP_011831804.1
GO:0008168 - methyltransferase activity [Evidence IEA]
cobalt-precorrin-5B (C(1))-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011767253.1
COORDINATES: similar to AA sequence:RefSeq:WP_011483692.1
COORDINATES: similar to AA sequence:RefSeq:WP_008906454.1
GO:0046026 - precorrin-4 C11-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018715376.1
energy-coupling factor ABC transporter permease
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012382.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012204652.1
GO:0016880 - acid-ammonia (or amide) ligase activity [Evidence IEA]
adenosylcobinamide-phosphate synthase CbiB
COORDINATES: similar to AA sequence:RefSeq:WP_013903008.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020228264.1
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_020656616.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014235645.1
COORDINATES: similar to AA sequence:RefSeq:WP_006484445.1
COORDINATES: protein motif:HMM:TIGR01352.1
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF039312.1
COORDINATES: similar to AA sequence:RefSeq:WP_008046868.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011517349.1
COORDINATES: protein motif:HMM:NF015366.2
tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011798476.1
COORDINATES: similar to AA sequence:RefSeq:WP_011763859.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF033749.1
GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012487273.1
tRNA-uridine aminocarboxypropyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012347966.1
trypsin-like peptidase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020181528.1
COORDINATES: similar to AA sequence:RefSeq:WP_014428298.1
COORDINATES: similar to AA sequence:RefSeq:WP_006753041.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014427348.1
GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014661855.1
COORDINATES: similar to AA sequence:RefSeq:WP_003425532.1
COORDINATES: protein motif:HMM:NF013579.2
GO:0006304 - DNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007229117.1
class I SAM-dependent DNA methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019924848.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004360021.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011880713.1
leucine-rich repeat-containing protein kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013520023.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_004307180.1
COORDINATES: similar to AA sequence:RefSeq:WP_011800667.1
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011734559.1
COORDINATES: similar to AA sequence:RefSeq:WP_012838768.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012348672.1
COORDINATES: similar to AA sequence:RefSeq:WP_008954184.1
COORDINATES: similar to AA sequence:RefSeq:WP_007856370.1
COORDINATES: similar to AA sequence:RefSeq:WP_020653858.1
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: protein motif:HMM:NF015947.2
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010256256.1
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_015012615.1
COORDINATES: similar to AA sequence:RefSeq:WP_012345131.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00080
yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012377.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017936884.1
COORDINATES: similar to AA sequence:RefSeq:WP_017936883.1
COORDINATES: similar to AA sequence:RefSeq:WP_004420740.1
COORDINATES: similar to AA sequence:RefSeq:WP_013391596.1
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_003050615.1
COORDINATES: similar to AA sequence:RefSeq:WP_014428491.1
Bug family tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007858884.1
cystathionine gamma-synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011805711.1
oxidoreductase-like domain-containing protein
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_012367016.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015015022.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013705.2
DnaJ C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_013949052.1
COORDINATES: similar to AA sequence:RefSeq:WP_019719289.1
GO:0018802 - 2,4-dihydroxyhept-2-ene-1,7-dioate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012525654.1
COORDINATES: similar to AA sequence:RefSeq:WP_009963399.1
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006049314.1
GO:0018817 - 2-oxo-hept-3-ene-1,7-dioate hydratase activity [Evidence IEA]
2-oxo-hepta-3-ene-1,7-dioic acid hydratase
COORDINATES: similar to AA sequence:RefSeq:WP_016447338.1
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014427118.1
COORDINATES: similar to AA sequence:RefSeq:WP_014427117.1
COORDINATES: similar to AA sequence:RefSeq:WP_012347495.1
ferric reductase-like transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_020506196.1
type II toxin-antitoxin system HipA family toxin YjjJ
COORDINATES: similar to AA sequence:RefSeq:WP_014248748.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015767217.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_019575047.1
phenylacetic acid degradation bifunctional protein PaaZ
COORDINATES: similar to AA sequence:RefSeq:WP_012347422.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_007878503.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
GO:0019619 - 3,4-dihydroxybenzoate catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016449263.1
COORDINATES: similar to AA sequence:RefSeq:WP_018906480.1
GO:0010124 - phenylacetate catabolic process [Evidence IEA]
1,2-phenylacetyl-CoA epoxidase subunit PaaE
COORDINATES: similar to AA sequence:RefSeq:WP_019654320.1
1,2-phenylacetyl-CoA epoxidase subunit PaaD
COORDINATES: similar to AA sequence:RefSeq:WP_019654319.1
1,2-phenylacetyl-CoA epoxidase subunit PaaC
COORDINATES: similar to AA sequence:RefSeq:WP_016454266.1
1,2-phenylacetyl-CoA epoxidase subunit PaaB
COORDINATES: similar to AA sequence:RefSeq:WP_013107389.1
GO:0097266 - phenylacetyl-CoA 1,2-epoxidase activity [Evidence IEA]
1,2-phenylacetyl-CoA epoxidase subunit PaaA
COORDINATES: similar to AA sequence:RefSeq:WP_013800321.1
GO:0047475 - phenylacetate-CoA ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019654315.1
hydroxyphenylacetyl-CoA thioesterase PaaI
COORDINATES: similar to AA sequence:RefSeq:WP_009398377.1
GO:0070403 - NAD+ binding [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007852078.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG
COORDINATES: similar to AA sequence:RefSeq:WP_008903979.1
phenylacetic acid degradation protein PaaN
COORDINATES: similar to AA sequence:RefSeq:WP_013124429.1
phenylacetic acid degradation protein PaaY
COORDINATES: similar to AA sequence:RefSeq:WP_011462553.1
COORDINATES: similar to AA sequence:RefSeq:WP_014427225.1
COORDINATES: similar to AA sequence:RefSeq:WP_006299272.1
COORDINATES: protein motif:HMM:NF012707.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:NF021619.2
COORDINATES: similar to AA sequence:RefSeq:WP_011798216.1
COORDINATES: similar to AA sequence:RefSeq:WP_012345312.1
COORDINATES: similar to AA sequence:RefSeq:WP_018988288.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF014324.2
COORDINATES: similar to AA sequence:RefSeq:WP_009551766.1
COORDINATES: similar to AA sequence:RefSeq:WP_018411587.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_009044254.1
COORDINATES: similar to AA sequence:RefSeq:WP_017684051.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: protein motif:HMM:NF013810.2
COORDINATES: similar to AA sequence:RefSeq:WP_011831213.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009859007.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012348265.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
FAD-linked oxidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004304702.1
COORDINATES: similar to AA sequence:RefSeq:WP_007670130.1
COORDINATES: protein motif:HMM:NF024627.2
COORDINATES: similar to AA sequence:RefSeq:WP_014779043.1
methyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011828531.1
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF015853.2
cytochrome c-type biogenesis protein CcmH
COORDINATES: similar to AA sequence:RefSeq:WP_014252802.1
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
DsbE family thiol:disulfide interchange protein
COORDINATES: protein motif:HMM:NF007691.0
COORDINATES: similar to AA sequence:RefSeq:WP_012355486.1
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0017003 - protein-heme linkage [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03141.1
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0015886 - heme transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011462378.1
GO:0015232 - heme transmembrane transporter activity [Evidence IEA]
GO:0015886 - heme transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015344.2
COORDINATES: similar to AA sequence:RefSeq:WP_014860173.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0015439 - ABC-type heme transporter activity [Evidence IEA]
heme ABC exporter ATP-binding protein CcmA
COORDINATES: similar to AA sequence:RefSeq:WP_011462395.1
COORDINATES: protein motif:HMM:NF015861.2
COORDINATES: similar to AA sequence:RefSeq:WP_012346373.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0008940 - nitrate reductase activity [Evidence IEA]
nitrate reductase catalytic subunit NapA
COORDINATES: similar to AA sequence:RefSeq:WP_009548567.1
COORDINATES: similar to AA sequence:RefSeq:WP_009548566.1
quinol dehydrogenase ferredoxin subunit NapH
COORDINATES: similar to AA sequence:RefSeq:WP_012346370.1
nitrate reductase cytochrome c-type subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012250972.1
COORDINATES: similar to AA sequence:RefSeq:WP_019951120.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-F CRISPR-associated endonuclease Cas1f
COORDINATES: similar to AA sequence:RefSeq:WP_013804308.1
GO:0004386 - helicase activity [Evidence IEA]
type I-F CRISPR-associated helicase Cas3f
COORDINATES: similar to AA sequence:RefSeq:WP_018951793.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_003537135.1
COORDINATES: similar to AA sequence:RefSeq:WP_012983811.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012203144.1
COORDINATES: similar to AA sequence:RefSeq:WP_013330865.1
COORDINATES: similar to AA sequence:RefSeq:WP_016451880.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
type I-F CRISPR-associated endoribonuclease Cas6/Csy4
COORDINATES: similar to AA sequence:RefSeq:WP_007862639.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013927.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015011850.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018319.2
COORDINATES: similar to AA sequence:RefSeq:WP_007850989.1
COORDINATES: similar to AA sequence:RefSeq:WP_013596859.1
COORDINATES: similar to AA sequence:RefSeq:WP_007850995.1
COORDINATES: similar to AA sequence:RefSeq:WP_007850998.1
COORDINATES: similar to AA sequence:RefSeq:WP_012346363.1
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: similar to AA sequence:RefSeq:WP_012348675.1
COORDINATES: similar to AA sequence:RefSeq:WP_007857761.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012345311.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006508 - proteolysis [Evidence IEA]; GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011288535.1
acetyl-CoA hydrolase/transferase family protein
COORDINATES: protein motif:HMM:NF024952.2
COORDINATES: protein motif:HMM:NF012791.2