Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed4, complete sequence.
type: Entry
definition: Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed4, complete sequence.
sequence version: NC_022903.1
sequence date: 2023-04-07
sequence: sequence
division: CON
label: NC_022903.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00262712
keyword: GSC:MIGS:2.1
keyword: IMPROVED_HIGH_QUALITY_DRAFT
keyword: RefSeq
source: Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023
organism: Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Zymomonadaceae; Zymomonas.
reference: 1
references: 24407627
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP006894.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 202747\nSource DNA and Organism available from Katherine Pappas\n(kmpappas@biol.uoa.gr)\nSource DNA available from Katherine Pappas (kmpappas@biol.uoa.gr)\nOrganism available from Katherine Pappas (kmpappas@biol.uoa.gr)\nContacts: Katherine Pappas (kmpappas@biol.uoa.gr)\n Tanja Woyke (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nAnnotation by JGI-ORNL\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Zymomonas mobilis mobilis CP4\nbiotic_relationship :: Free living\nrel_to_oxygen :: Facultative\nassembly :: ALLPATHS v. R37654\nsequencing_meth :: WGS\nGOLD Stamp ID :: Gi02097\nCurrent Finishing Status :: Level 2: High-Quality Draft\nGreengenes ID :: 112656\nFunding Program :: DOE-CSP 2008\nIsolation Site :: Fermenting sugarcane juice\nCell Shape :: Rod-shaped\nMotility :: Motile\nTemperature Range :: Mesophile\nGram Staining :: Gram-\nDiseases :: None\nalt_elev :: missing\ncollection_date :: missing\ncountry :: missing\ndepth :: missing\nenvironment :: missing\nisol_growth_condt :: missing\nlat_lon :: missing\nnum_replicons :: missing\nref_biomaterial :: missing\ntrophic_level :: missing\nfinishing_strategy :: missing\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Improved High-Qual…

sequence
subclass of: SO_0000155
sequence length: 30952
topology: circular
so has quality: SO_0000988
location: 1..30952
location: region:1-30952:1
RO_0002162: 627343

NC_022903
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00262712
type: BioSample
SIO_000068: biosample

1
title: Finished Genome of Zymomonas mobilis subsp. mobilis Strain CP4, an Applied Ethanol Producer
author: Kouvelis, V.N.
author: Teshima, H.
author: Bruce, D.
author: Detter, C.
author: Tapia, R.
author: Han, C.
author: Tampakopoulou, V.O.
author: Goodwin, L.
author: Woyke, T.
author: Kyrpides, N.C.
author: Typas, M.A.
author: Pappas, K.M.
journal: Genome Announc 2 (1), e00845-13 (2014)
pubmed: 24407627
comments: Publication Status: Online-Only

24407627
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Pappas, K.
author: Huntemann, M.
author: Han, J.
author: Chen, A.
author: Kyrpides, N.
author: Mavromatis, K.
author: Markowitz, V.
author: Palaniappan, K.
author: Ivanova, N.
author: Schaumberg, A.
author: Pati, A.
author: Liolios, K.
author: Nordberg, H.P.
author: Cantor, M.N.
author: Hua, S.X.
author: Woyke, T.
journal: Submitted (18-NOV-2013) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30952:1
position: 30952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30952:1:source
so part of: sequence
organism: Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023
mol type: genomic DNA
strain: CP4
sub species: mobilis
culture collection: NRRL:B-14023
plasmid: unnamed4

627343
type: Taxonomy
SIO_000068: taxonomy

ZCP4_RS09375
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09375
old locus tag: ZCP4_1883
so part of: sequence
location: complement(1417..1842)
location: region:1417-1842:-1
so has part: feature:1417-1842:-1:exon
subclass of: SO_0000010

79905363
type: Gene
SIO_000068: ncbigene

position:1417:-1
position: 1417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1842:-1
position: 1842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1417-1842:-1:exon

ZCP4_RS09375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09375
old locus tag: ZCP4_1883
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945615.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicB family antitoxin
translation: MRYPVAIEPDTKSTAFGIVVPDLPGCFSAGDTMDEAIANAEEAASAWIDATLDSGQDIPEPSSISDLYKDPDYKGWSFGFINIDPALLSDRVKRVNITLPERVLERLDLLAKNAGETRSGMIASLTLKAQKQTDHHSAVMI
SIO_010081: ZCP4_RS09375
subclass of: SO_0000673
so part of: ZCP4_RS09375
location: complement(1417..1842)
location: region:1417-1842:-1
so has part: feature:1417-1842:-1:exon

WP_012954797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1417-1842:-1:exon

ZCP4_RS09775
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09775
old locus tag: ZCP4_1884
so part of: sequence
location: complement(1852..2049)
location: region:1852-2049:-1
so has part: feature:1852-2049:-1:exon
subclass of: SO_0000010

79905423
type: Gene
SIO_000068: ncbigene

position:1852:-1
position: 1852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2049:-1
position: 2049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1852-2049:-1:exon

ZCP4_RS09775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09775
old locus tag: ZCP4_1884
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466474.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system HicA family toxin
translation: MCIMHNMKSRDLIKEVEKAGWILDRTRGSHHVFRHPHYSHHITIPHPKKELGVGLVRAIHKQAGL
SIO_010081: ZCP4_RS09775
subclass of: SO_0000673
so part of: ZCP4_RS09775
location: complement(1852..2049)
location: region:1852-2049:-1
so has part: feature:1852-2049:-1:exon

WP_012954798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1852-2049:-1:exon

ZCP4_RS09380
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09380
old locus tag: ZCP4_1886
so part of: sequence
location: complement(2244..4013)
location: region:2244-4013:-1
so has part: feature:2244-4013:-1:exon
subclass of: SO_0000010

79905364
type: Gene
SIO_000068: ncbigene

position:2244:-1
position: 2244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4013:-1
position: 4013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2244-4013:-1:exon

ZCP4_RS09380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09380
old locus tag: ZCP4_1886
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466460.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTASSSSSHFVASSPMSPSLNADLSSSDSASSVNMSDTSVLSPKPNLAPAPLSAELSSMSPNLVSPLEAADLSLAISASSSPSLASPLRATILPDSSTDPLPSSPSSTSFDGSPFVDRLGRFKRGTYRSMLMQMGISYDHAKGMADLAAEEFKNAKKKEPIGATYDHQSSPLANSVASEILASNTNLEVTASASDFDEIEYFDQMVSSGCDPETAADIARKTAIARRKDPLERATRYKIRRRTPDPVHRDSYEVGEREKSVWKPVNPQEIGAYLEAVDQYSIKTKGLSDKAVRLLKMLFRMVDFKTGRLEPTLDTICDSVGYARATVVKLLRQLQDLGFIRWIRRSIKIKADGKGPRRKQTSNAYGFLSPKAWPELARQVFERVMRRRNAPIPDDIDHAQEADKAETKAIIENLPPVEFMKEISGAKAPNALTDSLIQLARSIERADQREQEEQAKKAVQADQQEVKTPSQTPKEDTSKKPQISDNQREFNSYTLSCYSYLYNTDDHKFETTEKNMDCLAPANAVSADVVLENKPETDHFTKELNNLNLRPDQVAAVLQHRNKRREQHMMPLSPKDIAHLLIKTRQIRP
SIO_010081: ZCP4_RS09380
subclass of: SO_0000673
so part of: ZCP4_RS09380
location: complement(2244..4013)
location: region:2244-4013:-1
so has part: feature:2244-4013:-1:exon

WP_023593790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2244-4013:-1:exon

ZCP4_RS09385
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09385
old locus tag: ZCP4_1887
so part of: sequence
location: complement(4120..4371)
location: region:4120-4371:-1
so has part: feature:4120-4371:-1:exon
subclass of: SO_0000010

79905365
type: Gene
SIO_000068: ncbigene

position:4120:-1
position: 4120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4371:-1
position: 4371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4120-4371:-1:exon

ZCP4_RS09385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09385
old locus tag: ZCP4_1887
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014849500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2312 domain-containing protein
translation: MSSIHATEELTEKLQSIIRLEEEKARLDDQIAEAYRDLKGQKYDIKKAKLAVSRSRKGHPENSIRILINQIVNDRAMSRKLVP
SIO_010081: ZCP4_RS09385
subclass of: SO_0000673
so part of: ZCP4_RS09385
location: complement(4120..4371)
location: region:4120-4371:-1
so has part: feature:4120-4371:-1:exon

WP_011078096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4120-4371:-1:exon

ZCP4_RS09390
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09390
old locus tag: ZCP4_1888
so part of: sequence
location: complement(4496..4813)
location: region:4496-4813:-1
so has part: feature:4496-4813:-1:exon
subclass of: SO_0000010

79905366
type: Gene
SIO_000068: ncbigene

position:4496:-1
position: 4496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4813:-1
position: 4813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4496-4813:-1:exon

ZCP4_RS09390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09390
old locus tag: ZCP4_1888
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIKTAENMPSLVDGEISTFKQKISNALYLYMGQMECGLRLLMDRLEGIRRAEETRSYALLGNVSKDEFIRFNTEILSHLDVIKRSATKANEGLAGFIENFGSSL
SIO_010081: ZCP4_RS09390
subclass of: SO_0000673
so part of: ZCP4_RS09390
location: complement(4496..4813)
location: region:4496-4813:-1
so has part: feature:4496-4813:-1:exon

WP_012954800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4496-4813:-1:exon

ZCP4_RS09400
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09400
old locus tag: ZCP4_1889
so part of: sequence
location: 5299..5736
location: region:5299-5736:1
so has part: feature:5299-5736:1:exon
subclass of: SO_0000010

79905367
type: Gene
SIO_000068: ncbigene

position:5299:1
position: 5299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5736:1
position: 5736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5299-5736:1:exon

ZCP4_RS09400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09400
old locus tag: ZCP4_1889
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945620.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSRVEKVRQWIREERELRGWGATKLAQEACLAAQKRGEVINLKQQSISAMELGYIKSVPAWIKHVADAFGDNPVPATMQNIQNMTSFECKTSNKTSLPNEDDLKRVLLGLLAPVEESISWDAKQRIAGILAQKLPMGLEQIRLFK
SIO_010081: ZCP4_RS09400
subclass of: SO_0000673
so part of: ZCP4_RS09400
location: 5299..5736
location: region:5299-5736:1
so has part: feature:5299-5736:1:exon

WP_012817684.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5299-5736:1:exon

ZCP4_RS09405
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09405
old locus tag: ZCP4_1890
so part of: sequence
location: complement(6310..7389)
location: region:6310-7389:-1
so has part: feature:6310-7389:-1:exon
subclass of: SO_0000010

79905368
type: Gene
SIO_000068: ncbigene

position:6310:-1
position: 6310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7389:-1
position: 7389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6310-7389:-1:exon

ZCP4_RS09405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09405
old locus tag: ZCP4_1890
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466454.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: macro domain-containing protein
translation: MIIFTQGNLLEAKVEALVNTVNTVGVMGKGIALMFKERFHENFRLYSAACKAKEVQIGKMFVTPVYELGETRWIVNFPTKQHWRNPSRIEWIIKGLQDLRRVLLEKNIKSIAIPPLGAGNGGLSWKDVRGQIELALSDLDIDIFVFEPTSQYQNVAKRTGVEKLTPARALIAELVRRYWVMGIECSLLEIQKLAWFLQRAIEQYSPDNNPLNLDFQPHKYGPYTHQLNHLLNSLDGSYLHSDKRISDSDPLDVILFVNKRKDDLQAYLKSEAKPYRQALESAAMLIDGFESPFGMELLATVDWLLTRENIEPNVPALRKGLRSWRGGEDAALRKDRIFNDRSLGIALDRLTKTSTLAIA
SIO_010081: ZCP4_RS09405
subclass of: SO_0000673
so part of: ZCP4_RS09405
location: complement(6310..7389)
location: region:6310-7389:-1
so has part: feature:6310-7389:-1:exon

WP_012954778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6310-7389:-1:exon

ZCP4_RS09410
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09410
old locus tag: ZCP4_1891
so part of: sequence
location: complement(7389..8033)
location: region:7389-8033:-1
so has part: feature:7389-8033:-1:exon
subclass of: SO_0000010

79905369
type: Gene
SIO_000068: ncbigene

position:8033:-1
position: 8033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7389-8033:-1:exon

ZCP4_RS09410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09410
old locus tag: ZCP4_1891
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019752695.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4433 domain-containing protein
translation: MIYKSFNPQKALIWRIVHYSNLPWILDNGLYCGNSKIKSPNWFNIGNPELIQKRADHSVPLPPSGMLNDYIPFYFTPFSPMLRNISTGWGGIPQLPNEKIIILVSSLHHIADLGLPFLFTDSHAYSPCANYYSNLSDLNQIDWPILQHRDFKRDPDDPAKFERYQAEALIYQHLPINGLYGIICYTELLKQRIEQEICARNLNLRVYARPEWYF
SIO_010081: ZCP4_RS09410
subclass of: SO_0000673
so part of: ZCP4_RS09410
location: complement(7389..8033)
location: region:7389-8033:-1
so has part: feature:7389-8033:-1:exon

WP_012954779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7389-8033:-1:exon

ZCP4_RS09780
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09780
old locus tag: ZCP4_1893
pseudo: true
so part of: sequence
location: 8890..9681
location: region:8890-9681:1
so has part: feature:8890-9681:1:exon
subclass of: SO_0000010

79905424
type: Gene
SIO_000068: ncbigene

position:8890:1
position: 8890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9681:1
position: 9681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8890-9681:1:exon

ZCP4_RS09780
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09780
old locus tag: ZCP4_1893
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013933586.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS5 family transposase
SIO_010081: ZCP4_RS09780
subclass of: SO_0000673
so part of: ZCP4_RS09780
location: 8890..9681
location: region:8890-9681:1
so has part: feature:8890-9681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8890-9681:1:exon

ZCP4_RS09425
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09425
old locus tag: ZCP4_1894
so part of: sequence
location: complement(9939..10739)
location: region:9939-10739:-1
so has part: feature:9939-10739:-1:exon
subclass of: SO_0000010

79905370
type: Gene
SIO_000068: ncbigene

position:9939:-1
position: 9939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10739:-1
position: 10739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9939-10739:-1:exon

ZCP4_RS09425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09425
old locus tag: ZCP4_1894
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008830509.1
GO function: GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Dam family site-specific DNA-(adenine-N6)-methyltransferase
translation: MAEPFLKWAGGKRWLAHSSQLPCPRSFERYIEPFLGGGAIFFHLTPQKAILSDINPELIELYCVMRDSPTELMDLMKRHHKLHNNTYYYSIRNNTPDTRIERAARMLYLNRTCWNGLYRVNLKGVFNVPIGTKSSVVFEHDDFEAIAKLLQDTDIQCCDFEETISKAKAGDFIFIDPPYTVRHNLNGFIKYNEKLFSWDDQIRLKNSVEKAIERGASVTVTNADHDSIKDLYKEICEYHSIARSSILAGRSDRRTRTTEAIFSANI
SIO_010081: ZCP4_RS09425
subclass of: SO_0000673
so part of: ZCP4_RS09425
location: complement(9939..10739)
location: region:9939-10739:-1
so has part: feature:9939-10739:-1:exon

WP_012954781.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9939-10739:-1:exon

ZCP4_RS09430
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09430
old locus tag: ZCP4_1895
so part of: sequence
location: complement(10786..12108)
location: region:10786-12108:-1
so has part: feature:10786-12108:-1:exon
subclass of: SO_0000010

79905371
type: Gene
SIO_000068: ncbigene

position:10786:-1
position: 10786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12108:-1
position: 12108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10786-12108:-1:exon

ZCP4_RS09430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09430
old locus tag: ZCP4_1895
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKNIKRVNSPIKRNINTKSLKQADREYILKALKSFSNKDATLWIEQKKTIEWGSIEQLDRQYVVDAVAASAPNHCIDGWGFASRALSSILVGDGHTARHLAYYAQLRAALSILANLGVGIFNGTNFVINRNGNIIALDYGKENVGGRLGTHIIVWKALTEWSKNPISAEIFLNLIKIRGNSLFDCISAIYPSGSKIIAVEEMIRSWGVDLSGSKSEQMARNISSYMPQLSNPLNSGLEGLKLVKDFWDLFELGASHFDKIDLFLLRMILQKQHHSIYNKANYADGAIKERHNELPDNIKSAASIDFLTKQGYDDYPFLIKEAKKNNKVKQPTEMLARAFILLRIATGFTQSSFQESGILFNSSNRFSWLKSLIEMRGFFDISNTNFERNYLWDDMEDALLDFEDSIDPIPGSMFEWMQKGERGLPTISQAERVGVWSLYV
SIO_010081: ZCP4_RS09430
subclass of: SO_0000673
so part of: ZCP4_RS09430
location: complement(10786..12108)
location: region:10786-12108:-1
so has part: feature:10786-12108:-1:exon

WP_012954782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10786-12108:-1:exon

ZCP4_RS09435
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09435
old locus tag: ZCP4_1896
so part of: sequence
location: complement(12111..13601)
location: region:12111-13601:-1
so has part: feature:12111-13601:-1:exon
subclass of: SO_0000010

79905372
type: Gene
SIO_000068: ncbigene

position:12111:-1
position: 12111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13601:-1
position: 13601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12111-13601:-1:exon

ZCP4_RS09435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09435
old locus tag: ZCP4_1896
inference: COORDINATES: protein motif:HMM:TIGR03187.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DGQHR domain-containing protein
translation: MTKEGKKIIPALRFQQWLDIWNAYEYKEEEQRKKPDKYLYMFSMNAAELRKFCDVYKRDRQGSSSEGIQRTRDKLRTNRIYRYIKYGYPYGDLNSVQMEENESLRKPGWLPTAIVINILQNGDKRKNKIISSEHLVKIEEDKNNFYKLELPHNSDFSNSVAPFEVIDGQHRLWSFDTNDDDEVIPENFELPVIAFHGLDIAWQAYLFWSINVSPKRINPSHAFDLYPLLRTQDWLERVDELKVYREARAQELTEILYSQKGSPWKERINMLGERSAGSVSQAGWVRSLLATFFSTGKGNSQKGLFQSNLDDNTPLEWSRSQQAAFIIQIWDDIKKEIENNKEEEWINKYKDSGKDPFSDKTSWLNQDQGVRAVLMVTNNLFYKNSSEWNLDNWFIGQDASNNTSEENVNYALKNLNEQSFRNYLKSLAQGIINFDWRSLKGPGVDEKSEEFKAEKRSYRGSGGYIALGHKILKMIADDQNSNLRSYASKLLNETMA
SIO_010081: ZCP4_RS09435
subclass of: SO_0000673
so part of: ZCP4_RS09435
location: complement(12111..13601)
location: region:12111-13601:-1
so has part: feature:12111-13601:-1:exon

WP_012954783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12111-13601:-1:exon

ZCP4_RS09440
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09440
old locus tag: ZCP4_1897
so part of: sequence
location: complement(13783..14982)
location: region:13783-14982:-1
so has part: feature:13783-14982:-1:exon
subclass of: SO_0000010

79905373
type: Gene
SIO_000068: ncbigene

position:13783:-1
position: 13783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14982:-1
position: 14982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13783-14982:-1:exon

ZCP4_RS09440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09440
old locus tag: ZCP4_1897
EC number: 3.1.4.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007676713.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phosphatidylinositol-specific phospholipase C domain-containing protein
translation: MFKILNKYIPICGVIFLASTPHIANANMIPDNTPINKIQVIGTHNSYNLGVDPHIRKVIDDFFASSKEKMSKEKLEEFELAHPNHLSPSETLSYSHPSIKKQLDMGVRSLEIDANADPEGGAYADPILYKILKERGVNSLPSFDVSALKQPGIKILHIPDVDIHSSCPTLRICLTQMKNWSESHPRHIPIFVMIEAKVQPLNLKLSGNPDKTPNFSKIPPFTDETYNEIDQTIVDVLGRNKVITPDDVRGGYPNLEDAVLAGNWPTLGQARGKFIFFLTTATGRDGASAYLNGHPGLKGRMAFMDSEPGKPYAAFVLEDNALTRGDVIRDDVKKGYFVRTRADIDTYEAKKNDLTRAKAAFDSGAQIVSTDYEAAGNAYHTPYVVKLPGKNKDARMISK
SIO_010081: ZCP4_RS09440
subclass of: SO_0000673
so part of: ZCP4_RS09440
location: complement(13783..14982)
location: region:13783-14982:-1
so has part: feature:13783-14982:-1:exon

WP_012954784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13783-14982:-1:exon

ZCP4_RS09445
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09445
old locus tag: ZCP4_1898
so part of: sequence
location: 15336..17597
location: region:15336-17597:1
so has part: feature:15336-17597:1:exon
subclass of: SO_0000010

79905374
type: Gene
SIO_000068: ncbigene

position:15336:1
position: 15336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17597:1
position: 17597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15336-17597:1:exon

ZCP4_RS09445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09445
old locus tag: ZCP4_1898
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010396122.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MSPAFAEQNIIQNNEKVSQSKDNTENKADSKQLDAITVTAERRSENNQRVPISVLHLDGKTIANAGYKDLTDLQYLAPGVQYDPTQGAAFQIRGVGSESFDFSNAKSVSVVVDDVVMDAQRANGLIGLVDINNVDIMMGPQGTLFGMNSTSGVISVTTGKPKLGKLSGNGSFSYGEHNERIINGTMNIPIGKIAALRVSAFDNAQDGYGHNVTLHKLVGSTHEYGTRAKLYIEPAYNLDITLAGDYAHHWDSSVRTPVADQPSAVTEMLHGWGIYPNAKNADTADSFLGKIEREEWGSSLHVHTKLGNNDLTFISAYRGSLYNNATPVDFLPSDQYAFIPYNYGHLTTKKISEEIHFSSPKGHFLEYLVGGFYNRLEAKQTQYGWGTYGAPLVDTNGNSVSSLYCTSCAIGKDGNTSLFKSRNESLAAFGQLKFNILKSFTLAISGRYTHDRNSQSLNYVTTDPVQIMGYTPTFIPTSAPPIYNYGVKRGQNFSGRISPEYHFNADTMAYFTFSTGYKPAGIAFVGNKYDPYRSEKVKSYELGFKSEWFRHRLRFNFDLFREDFTDFQATVLTNIPAGAGGWLQTTAIGNAGGLRSQGVEGNIAFKPISSLTLSGAATYTDAYFTDYHYNKTTDYTHTRLTNAPRFSGNVFVDYDHDIAPDLGFRAHVDYSYRSTYWTVVGQPAYSRVPAHSLVNLRFSVMPLNKKIQVGVYVRNLFDKYFSTGWQQYGAMGLVHYTTPDARRTVGGFVNFSF
SIO_010081: ZCP4_RS09445
subclass of: SO_0000673
so part of: ZCP4_RS09445
location: 15336..17597
location: region:15336-17597:1
so has part: feature:15336-17597:1:exon

WP_043940415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15336-17597:1:exon

ZCP4_RS09450
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09450
old locus tag: ZCP4_1899
so part of: sequence
location: complement(17722..18012)
location: region:17722-18012:-1
so has part: feature:17722-18012:-1:exon
subclass of: SO_0000010

79905375
type: Gene
SIO_000068: ncbigene

position:17722:-1
position: 17722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18012:-1
position: 18012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17722-18012:-1:exon

ZCP4_RS09450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09450
old locus tag: ZCP4_1899
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012817681.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKKPTGLAAFSRPKTVIPPLTEEPTSTIENQTAFSPRKKRGSGDTVALTVKVRRTDWQRLRQLADAEGTTIQAMAEAGFSAILAQHGLAPLATRK
SIO_010081: ZCP4_RS09450
subclass of: SO_0000673
so part of: ZCP4_RS09450
location: complement(17722..18012)
location: region:17722-18012:-1
so has part: feature:17722-18012:-1:exon

WP_012954786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17722-18012:-1:exon

ZCP4_RS09455
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
gene: parA
locus tag: ZCP4_RS09455
old locus tag: ZCP4_1900
so part of: sequence
location: complement(18049..18672)
location: region:18049-18672:-1
so has part: feature:18049-18672:-1:exon
subclass of: SO_0000010

79905376
type: Gene
SIO_000068: ncbigene

position:18049:-1
position: 18049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18672:-1
position: 18672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18049-18672:-1:exon

ZCP4_RS09455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
gene: parA
locus tag: ZCP4_RS09455
old locus tag: ZCP4_1900
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466448.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MHVITFLSQKGGSGKTTLSVHTAVAAEAAGKKVCIIDADPQESATTWGMSREKPTPIVATAQASDLDSALSAAEAEGIDLAIIDAPPHAAPTASQIARRSDLVLVPIRPSAFDLAAVPAIVDIIRASKSRGAFILSACPFRAPEIEETRLALEGYNLPIFPSEIVDRRAFARAVTTGRAVTEFESNGKAAEEIHHLWIWINNTLECI
SIO_010081: ZCP4_RS09455
subclass of: SO_0000673
so part of: ZCP4_RS09455
location: complement(18049..18672)
location: region:18049-18672:-1
so has part: feature:18049-18672:-1:exon

WP_012954787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18049-18672:-1:exon

ZCP4_RS09460
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09460
old locus tag: ZCP4_1901
so part of: sequence
location: complement(18743..19072)
location: region:18743-19072:-1
so has part: feature:18743-19072:-1:exon
subclass of: SO_0000010

79905377
type: Gene
SIO_000068: ncbigene

position:18743:-1
position: 18743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19072:-1
position: 19072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18743-19072:-1:exon

ZCP4_RS09460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09460
old locus tag: ZCP4_1901
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014849506.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MALKRTANSKRASLPRSSDYTKSFLKDWKRLSRSGRYDLNRLKSVMMLLIENDEPLSAEWLDHPLKGEMAAYRECHIGGDFLLIYRIDNSHQPEMVIFVRAGTHSELLE
SIO_010081: ZCP4_RS09460
subclass of: SO_0000673
so part of: ZCP4_RS09460
location: complement(18743..19072)
location: region:18743-19072:-1
so has part: feature:18743-19072:-1:exon

WP_012954788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18743-19072:-1:exon

ZCP4_RS09465
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09465
old locus tag: ZCP4_1902
so part of: sequence
location: complement(19047..19325)
location: region:19047-19325:-1
so has part: feature:19047-19325:-1:exon
subclass of: SO_0000010

79905378
type: Gene
SIO_000068: ncbigene

position:19047:-1
position: 19047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19325:-1
position: 19325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19047-19325:-1:exon

ZCP4_RS09465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09465
old locus tag: ZCP4_1902
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012817678.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MPTAKTMIHIRVADDLKEQVSTTLASMGLSVSEAVRLFLHRVVAEQKFPFELRVPNRETRMAMSEADEIIKSHQSRFSNSKELIDGLEAHSK
SIO_010081: ZCP4_RS09465
subclass of: SO_0000673
so part of: ZCP4_RS09465
location: complement(19047..19325)
location: region:19047-19325:-1
so has part: feature:19047-19325:-1:exon

WP_012954789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19047-19325:-1:exon

ZCP4_RS09985
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09985
old locus tag: ZCP4_1903
so part of: sequence
location: 19818..20030
location: region:19818-20030:1
so has part: feature:19818-20030:1:exon
subclass of: SO_0000010

79905450
type: Gene
SIO_000068: ncbigene

position:19818:1
position: 19818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20030:1
position: 20030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19818-20030:1:exon

ZCP4_RS09985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09985
old locus tag: ZCP4_1903
inference: COORDINATES: protein motif:HMM:NF024736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS5 family transposase
translation: MRGDLTDAEWQIIEGLLPSERGRGARPAKSNRLFLNGMLYVLRTGCPWRDMHERYGKWNSVYVRFRRWAG
SIO_010081: ZCP4_RS09985
subclass of: SO_0000673
so part of: ZCP4_RS09985
location: 19818..20030
location: region:19818-20030:1
so has part: feature:19818-20030:1:exon

WP_012954790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19818-20030:1:exon

ZCP4_RS09990
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09990
so part of: sequence
location: 20147..20365
location: region:20147-20365:1
so has part: feature:20147-20365:1:exon
subclass of: SO_0000010

79905451
type: Gene
SIO_000068: ncbigene

position:20147:1
position: 20147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20365:1
position: 20365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20147-20365:1:exon

ZCP4_RS09990
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09990
inference: COORDINATES: protein motif:HMM:NF024975.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MTPRSNRKKHIPYNLQHYKDRNCIERMFNKLKQFRRIATHYDKTRKSFLAFLHIAAVKLWLPYFVNRTQHYR
SIO_010081: ZCP4_RS09990
subclass of: SO_0000673
so part of: ZCP4_RS09990
location: 20147..20365
location: region:20147-20365:1
so has part: feature:20147-20365:1:exon

WP_252509173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20147-20365:1:exon

ZCP4_RS09475
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09475
old locus tag: ZCP4_1904
so part of: sequence
location: 20466..21929
location: region:20466-21929:1
so has part: feature:20466-21929:1:exon
subclass of: SO_0000010

79905379
type: Gene
SIO_000068: ncbigene

position:20466:1
position: 20466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21929:1
position: 21929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20466-21929:1:exon

ZCP4_RS09475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09475
old locus tag: ZCP4_1904
inference: COORDINATES: protein motif:HMM:NF022633.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2971 domain-containing protein
translation: MSNQEVYIFVTEGLILEYFYRFRSISSLLDGFHELVNQEIYFPMIDELNDPLEGFMDIVWRGDRIVWRNLLRHYLLCLLDTVALTSLAGDELSSEKVANLVYKTDNDLPEAPIRTIYSRACETFLNHKAVEILLDNWSRDEKVIRRDELTYYLRLMHYSALKIVIDLLAEYEIKLMSSTQGMSDHASKSMAMIPEMLRLHSSFVNEQSAALFFTSNNIIEQLSLIHELKGSFSPDRHYWLLVVQDFPCHYLKALERLLYPDWYAACFVTDPTNAAMWGHYGEGHRGMCLKFRAKPNNKGVASLELRRATSWSGNGSVGYSYVPHTFEPIKYNSEFIEIDFFRSLGRLPMIKLSHFWYRGPDGELSDIANGILGSDSQWRDEYWQRFGDWYRIKLPEWSYENEHRLILHSSIDNLEKKEDRKIKYRFDDLSGIIFGLKTSMANKIAAIRIIEEKCLAVGRTDFEFWQAYYSHRTQRIELFRLNLIRLK
SIO_010081: ZCP4_RS09475
subclass of: SO_0000673
so part of: ZCP4_RS09475
location: 20466..21929
location: region:20466-21929:1
so has part: feature:20466-21929:1:exon

WP_144081081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20466-21929:1:exon

ZCP4_RS09480
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09480
old locus tag: ZCP4_1905
so part of: sequence
location: complement(22211..22972)
location: region:22211-22972:-1
so has part: feature:22211-22972:-1:exon
subclass of: SO_0000010

79905380
type: Gene
SIO_000068: ncbigene

position:22211:-1
position: 22211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22972:-1
position: 22972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22211-22972:-1:exon

ZCP4_RS09480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09480
old locus tag: ZCP4_1905
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MLRIRGTTYHFRRIVPPALRSVLKQRELVKKNPWTGWSFENGPKTIRRGWSTQELQILMTGDWPRSSVPEITFNIITMIGAYSGLRLGKICHLRKEDLQTIDGIPRFVIQPHTDSGWSPNTDPEHGLFLFTPELIEAGLLELKDTTNGSYLIPAINTSKDGVRGTTFGRVFIVEKARLGLPAEIPFHSFRHSVSTQLRNVTADIREIWIDRLLGHEATHKSQGTSTYLSGITTANLRQTVEAISYPDDIFRKG
SIO_010081: ZCP4_RS09480
subclass of: SO_0000673
so part of: ZCP4_RS09480
location: complement(22211..22972)
location: region:22211-22972:-1
so has part: feature:22211-22972:-1:exon

WP_012954792.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22211-22972:-1:exon

ZCP4_RS09850
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09850
so part of: sequence
location: 23331..23534
location: region:23331-23534:1
so has part: feature:23331-23534:1:exon
subclass of: SO_0000010

79905429
type: Gene
SIO_000068: ncbigene

position:23331:1
position: 23331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23534:1
position: 23534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23331-23534:1:exon

ZCP4_RS09850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09850
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSGPAGSGTKTVDNGRSPSRVQVIQTRFCAFWLTTFAFNRLSAHRGHRLELQGLGSASAQVPGHRRQ
SIO_010081: ZCP4_RS09850
subclass of: SO_0000673
so part of: ZCP4_RS09850
location: 23331..23534
location: region:23331-23534:1
so has part: feature:23331-23534:1:exon

WP_144081082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23331-23534:1:exon

ZCP4_RS09485
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09485
old locus tag: ZCP4_1907
so part of: sequence
location: 23869..25416
location: region:23869-25416:1
so has part: feature:23869-25416:1:exon
subclass of: SO_0000010

79905381
type: Gene
SIO_000068: ncbigene

position:23869:1
position: 23869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25416:1
position: 25416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23869-25416:1:exon

ZCP4_RS09485
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09485
old locus tag: ZCP4_1907
EC number: 2.1.1.72
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017712096.1
GO function: GO:0015666 - restriction endodeoxyribonuclease activity [Evidence IEA]; GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO process: GO:0006306 - DNA methylation [Evidence IEA]; GO:0009307 - DNA restriction-modification system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction-modification system subunit M
translation: MTAQAQRAALQRKIWDIANDVRGSVDGWDFKQYVLGTLFYRFISENFAAYIEAGDESIDYAALSDNVITDDIKDDAIKTKGYFIYPSQLFANVADDANTNDSLNTDLARIFTAIESSANGYPSEQDIRGLFADFDTTSTRLGNTVTEKNSRLAKVLKRVAELDFGDFHNSQIDLFGDAYEFLISNYAANAGKSGGEFFTPQHVSKLIAQLAMHGQKKVNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNINYDKFNIQRGDTLTQPHFQDDKPFDAIVSNPPYSVKWIGSDDPTLINDDRFAPAGVLAPKSKADFAFVLHALSYLSAKGRAAIVCFPGIFYRDGAEKKIRKYLVDNNYVETVIALASNLFYGTTIAVTILVLAKNKTHAAIQFIDASGEEFFKKATNTNLMTDHHIARVIEIFDRKEDVDHVAASVPYETIVERDYNLSVSSYVEPRDTREVVNINELNEEISATVEKIDRLRADIDAIIAEIDA
SIO_010081: ZCP4_RS09485
subclass of: SO_0000673
so part of: ZCP4_RS09485
location: 23869..25416
location: region:23869-25416:1
so has part: feature:23869-25416:1:exon

WP_012954793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23869-25416:1:exon

ZCP4_RS09490
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09490
old locus tag: ZCP4_1908
so part of: sequence
location: 25413..26687
location: region:25413-26687:1
so has part: feature:25413-26687:1:exon
subclass of: SO_0000010

79905382
type: Gene
SIO_000068: ncbigene

position:25413:1
position: 25413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26687:1
position: 26687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25413-26687:1:exon

ZCP4_RS09490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09490
old locus tag: ZCP4_1908
EC number: 3.1.21.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_001520383.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006304 - DNA modification [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: restriction endonuclease subunit S
translation: MSAAGFLEKLLDGAEVAWMPLGEIASVQRGSSPRPISKFITSDKNGVPWIKIGDTTPKSKYVTKTAEKITPDGAKKSRLLSKGDFIISNSMSFGRPYILGIDGAIHDGWASVSEFKSKLNSDFLYHYLSSHSVQNYWLTKINSGSVSNLNSKLIQSLLIPIPCPDDPAKSLAIQEEIVRILDTFTELTAELTAELTAELTQRKKQYNHYREQLLTFDEDGVEYLPMGDERVGKFIRGGGLQKKDFISSGVGCIHYGQIYTHYGTHTGRTKSYVSEDFARKARMAKPGNLVIATTSENDDDVCKAVAWLGDRDIAVSSDACFYAHKLNPKFVSYFFQTEQFQVQKRPYITGTKVRRVNADNLAKILIPIPSLEEQARIAAILDKFDTLTSSLTEGLPREIALREKQYAYYRDQLLSFPKPDAEDA
SIO_010081: ZCP4_RS09490
subclass of: SO_0000673
so part of: ZCP4_RS09490
location: 25413..26687
location: region:25413-26687:1
so has part: feature:25413-26687:1:exon

WP_012954794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25413-26687:1:exon

ZCP4_RS09495
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09495
old locus tag: ZCP4_1909
so part of: sequence
location: 26688..27848
location: region:26688-27848:1
so has part: feature:26688-27848:1:exon
subclass of: SO_0000010

79905383
type: Gene
SIO_000068: ncbigene

position:26688:1
position: 26688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27848:1
position: 27848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26688-27848:1:exon

ZCP4_RS09495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09495
old locus tag: ZCP4_1909
inference: COORDINATES: similar to AA sequence:RefSeq:WP_006453019.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MGQTLTNIAEKLQNASKKVQLIYAFNASGKTRLSRAFRELIDPKTEERDDDYHPKLLYYNAFTEDLFYWDNDLTRDTERKLCIQPNAFTKSAFEDLGLDRDVITVFQRYTQPNLTPIFNEEYKTKDKDDREIIVPAFSEVIFTLGQDPETNPERLKISKGEESNFIWSIFYCLLDQVVSTRNITEVDDRETDQFNDLEYVFIDDPVSSLDENHLIQLAVDVADRIKRSDTVNGLKFIITTHSPLFFNVLFNELNNKTCYMLKRLEDGGFELEATSGDSNHSFSYHLYLKQTLEEAIAADKIERYHFTLLRNLYEKTSNFLGYPRWSDLLPGDQRLYFNRIIQFTSHNTLSSEAIAEPSPQEKQTVKFLLDHLCNNYSYWQEETPNV
SIO_010081: ZCP4_RS09495
subclass of: SO_0000673
so part of: ZCP4_RS09495
location: 26688..27848
location: region:26688-27848:1
so has part: feature:26688-27848:1:exon

WP_012954795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26688-27848:1:exon

ZCP4_RS09500
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09500
old locus tag: ZCP4_1910
so part of: sequence
location: 27841..30942
location: region:27841-30942:1
so has part: feature:27841-30942:1:exon
subclass of: SO_0000010

79905384
type: Gene
SIO_000068: ncbigene

position:27841:1
position: 27841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30942:1
position: 30942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27841-30942:1:exon

ZCP4_RS09500
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09500
old locus tag: ZCP4_1910
EC number: 3.1.21.3
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013945633.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type I restriction endonuclease subunit R
translation: MSEQTTPIAETNRFIVLDKYERAWEAADSYQSESDLERELVQDLHDQGYEYLPDLKSTNAMLANVRVQLQALNDVQFTDKEWARFVETYLDRPSDSATDKTRKIHDDYIFDFVFDDGRIQNIYLVDKANICRNKVQVIKQFEQAGTHANRYDVTILVNGLPLVQVELKKRGVAIREAFNQIHRYSKESFNSDSSLFKYLQIFVISNGTDTRYFANTTKRDKNSFDFTMNWAQADNSLIRDLKDFTATFFEKRTLLKVLLNYSVFDVSDTLLVMRPYQIAATERILRKIRSSFEGKTLGKSENGGYIWHTTGSGKTLTSFKAARLATQLDFIDKVFFVVDRKDLDFQTMKEYQRFSPDSVNGSDSTAGLKRNLSKDDNKIIVTTIQKLNNLMKSEGDLPVYTQRVVFIFDECHRSQFGEAQKNLKRKFKQFCQFGFTGTPIFRENASGAETTASVFGSELHSYVITDAIRDEKVLKFKVDYNDVRPQFKTIETEQDEKKLSAAENRQALQHPARIAEISQYILDNFRRKTHRLYGDNKGFNAMFAVSSVDAAKLYYEKLNALQEGSDKPLKIATIFSFAANEEQDAIGDIPDESFEVSALNSSAKEFLKAAIADYNACFRTNFSVDSKGFQNYYRDLAKRVKSKEVDLLIVVGMFLTGFDAPTLNTLFVDKNLRFHGLIQAYSRTNRIYDATKSFGNIVTFRDLEEATVKAITLFGNANTKNVVLEKSYSEYMEGFTDQTTGEARRGFADVVRELEERFPDPTAIEKEADKKAFAKLFGEYLRVENILQNYDEFSSLKELQEIDESDAEAMRAFKERHHLSDDDVDELKSIEMPADRKVQDYRSTYNDIRDWLRREKASAEQVESTIDWDDVVFEVDLLKSQEINLDYILELIFEHNKKTKSKSELVSEVRRVIRASIGNRAKESLIVDFINQTNLDELGDKAGVIEAFFAFAQAEQSREAEELIADEKLNAEAAKRYIAMSIKREYVSENGTELNSILPKMSPLNPKYLTKKRDVFQRISAFVEKFKGVGGKI
SIO_010081: ZCP4_RS09500
subclass of: SO_0000673
so part of: ZCP4_RS09500
location: 27841..30942
location: region:27841-30942:1
so has part: feature:27841-30942:1:exon

WP_012954796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27841-30942:1:exon