Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed3, complete sequence.
type: Entry
definition: Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 plasmid unnamed3, complete sequence.
sequence version: NC_022902.1
sequence date: 2023-04-07
sequence: sequence
division: CON
label: NC_022902.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN00262712
keyword: GSC:MIGS:2.1
keyword: IMPROVED_HIGH_QUALITY_DRAFT
keyword: RefSeq
source: Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023
organism: Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Zymomonadaceae; Zymomonas.
reference: 1
references: 24407627
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP006893.1.\nURL -- http://www.jgi.doe.gov\nJGI Project ID: 202747\nSource DNA and Organism available from Katherine Pappas\n(kmpappas@biol.uoa.gr)\nSource DNA available from Katherine Pappas (kmpappas@biol.uoa.gr)\nOrganism available from Katherine Pappas (kmpappas@biol.uoa.gr)\nContacts: Katherine Pappas (kmpappas@biol.uoa.gr)\n Tanja Woyke (microbe@cuba.jgi-psf.org)\nWhole genome sequencing and draft assembly at JGI-PGF\nAnnotation by JGI-ORNL\nThe JGI and collaborators endorse the principles for the\ndistribution and use of large scale sequencing data adopted by the\nlarger genome sequencing community and urge users of this data to\nfollow them. It is our intention to publish the work of this\nproject in a timely fashion and we welcome collaborative\ninteraction on the project and analysis.\n(http://www.genome.gov/page.cfm?pageID=10506376).\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##MIGS-Data-START##\ninvestigation_type :: bacteria_archaea\nproject_name :: Zymomonas mobilis mobilis CP4\nbiotic_relationship :: Free living\nrel_to_oxygen :: Facultative\nassembly :: ALLPATHS v. R37654\nsequencing_meth :: WGS\nGOLD Stamp ID :: Gi02097\nCurrent Finishing Status :: Level 2: High-Quality Draft\nGreengenes ID :: 112656\nFunding Program :: DOE-CSP 2008\nIsolation Site :: Fermenting sugarcane juice\nCell Shape :: Rod-shaped\nMotility :: Motile\nTemperature Range :: Mesophile\nGram Staining :: Gram-\nDiseases :: None\nalt_elev :: missing\ncollection_date :: missing\ncountry :: missing\ndepth :: missing\nenvironment :: missing\nisol_growth_condt :: missing\nlat_lon :: missing\nnum_replicons :: missing\nref_biomaterial :: missing\ntrophic_level :: missing\nfinishing_strategy :: missing\n##MIGS-Data-END##\n\n##Genome-Assembly-Data-START##\nFinishing Goal :: Improved High-Qual…

sequence
subclass of: SO_0000155
sequence length: 32400
topology: circular
so has quality: SO_0000988
location: 1..32400
location: region:1-32400:1
RO_0002162: 627343

NC_022902
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN00262712
type: BioSample
SIO_000068: biosample

1
title: Finished Genome of Zymomonas mobilis subsp. mobilis Strain CP4, an Applied Ethanol Producer
author: Kouvelis, V.N.
author: Teshima, H.
author: Bruce, D.
author: Detter, C.
author: Tapia, R.
author: Han, C.
author: Tampakopoulou, V.O.
author: Goodwin, L.
author: Woyke, T.
author: Kyrpides, N.C.
author: Typas, M.A.
author: Pappas, K.M.
journal: Genome Announc 2 (1), e00845-13 (2014)
pubmed: 24407627
comments: Publication Status: Online-Only

24407627
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
author: Pappas, K.
author: Huntemann, M.
author: Han, J.
author: Chen, A.
author: Kyrpides, N.
author: Mavromatis, K.
author: Markowitz, V.
author: Palaniappan, K.
author: Ivanova, N.
author: Schaumberg, A.
author: Pati, A.
author: Liolios, K.
author: Nordberg, H.P.
author: Cantor, M.N.
author: Hua, S.X.
author: Woyke, T.
journal: Submitted (18-NOV-2013) DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32400:1
position: 32400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-32400:1:source
so part of: sequence
organism: Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023
mol type: genomic DNA
strain: CP4
sub species: mobilis
culture collection: NRRL:B-14023
plasmid: unnamed3

627343
type: Taxonomy
SIO_000068: taxonomy

ZCP4_RS09235
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09235
old locus tag: ZCP4_1853
so part of: sequence
location: complement(80..2122)
location: region:80-2122:-1
so has part: feature:80-2122:-1:exon
subclass of: SO_0000010

79905338
type: Gene
SIO_000068: ncbigene

position:80:-1
position: 80
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2122:-1
position: 2122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80-2122:-1:exon

ZCP4_RS09235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09235
old locus tag: ZCP4_1853
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012817700.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MITDPVEAASSIQAETTSAYKEKPTTENKALLRPKDITVTAKRPISTQASSSTHISAEDMQAYRMQTVSDIAERVPNLSFTSMTPSNPVVTVRGMGSSEDHGSSSYTPILIDGVSVPSFALGQIFDLSDVDVMRGAQITEGINAFAGLISAHSHDPGDKLSASASFEYGTGNRKRGSFTADIPVNDSTSIRLALGGETADGYIHNKALDKHNTGGWHSWWGRLKILHTDSSGGEWRISLHHMINHGGNDYFEMPENAKKHISYSTDQGKNDTEYLLGSLQYHRSFSEHLNIDAMFGGVGTKWKYWNPRSVFNAVSGNSAPTQQIGGSLMLSGTFGKLDWKGGVYGQRALRSSPYDFDMSPYYISHTTADLGTTEIAFMGELGWHFAQNWKLVPSIRVEYVDSSLKNWTSSISGDVPTAFSMYQSLPDQTISKTVPLPGVKLEYSPKNFSSLRQFMWLSYTRSFLAPGYNPFSNYAETASVPYSSSYGNNIELGYRVGDKKNIWSIEVVGFSNFLSNLQVAATSKLGETVVATAKKAHSRGMEATVHWRPIHNFQLNGFVGLTYAAYDRFIYGGKDYSGELMDSTPISNFGFSGAWTPIKDLTINASIIRRGRSTLHPSSNVENDPYLLMDAQIEKRWKHWSIAIYGHNLTDSGYYTRGVPSGRVVAANPRQIGLRAGVSF
SIO_010081: ZCP4_RS09235
subclass of: SO_0000673
so part of: ZCP4_RS09235
location: complement(80..2122)
location: region:80-2122:-1
so has part: feature:80-2122:-1:exon

WP_023593785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:80-2122:-1:exon

ZCP4_RS09240
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09240
old locus tag: ZCP4_1854
so part of: sequence
location: complement(2399..3280)
location: region:2399-3280:-1
so has part: feature:2399-3280:-1:exon
subclass of: SO_0000010

79905339
type: Gene
SIO_000068: ncbigene

position:2399:-1
position: 2399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3280:-1
position: 3280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399-3280:-1:exon

ZCP4_RS09240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09240
old locus tag: ZCP4_1854
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466416.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AraC family transcriptional regulator
translation: MKNIRSSHIHIKHPSYLVGQSLLHPVFNQFHSGLSASWFTSENACSVEGVFDNASSVVRCLVILSGSCEIHIDDDIYILASQDIVMANLQDSKFKINTSHDFSCLELHITLEFLEDIKTPSWETEIFTKRKILRKSKLCLPLRKAATSLCLSMQKGFHNAPLRCAMALAVIGHSFEHIQESHPQNTLSTIEKARLDKAYKLLLSRKDIAPRIIDLAKYSGLSATRLKTGFREIYGCGPYSLFQAHRMEHAKILLKKYSVTETAIQLGYSNISHFSAAFQRQFGKLPNTYRKKN
SIO_010081: ZCP4_RS09240
subclass of: SO_0000673
so part of: ZCP4_RS09240
location: complement(2399..3280)
location: region:2399-3280:-1
so has part: feature:2399-3280:-1:exon

WP_012954775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2399-3280:-1:exon

ZCP4_RS09245
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09245
old locus tag: ZCP4_1855
so part of: sequence
location: complement(3440..3727)
location: region:3440-3727:-1
so has part: feature:3440-3727:-1:exon
subclass of: SO_0000010

79905340
type: Gene
SIO_000068: ncbigene

position:3440:-1
position: 3440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3727:-1
position: 3727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3440-3727:-1:exon

ZCP4_RS09245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09245
old locus tag: ZCP4_1855
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466417.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSNNAFSIDLSRLKKQPKTSSTKETDQVAEELGFSSREIVKKRGRKPSPRTGQVHAKVMPDTSIEIANEAKRRGVQQGVLIEEAWQLYKQNMAIK
SIO_010081: ZCP4_RS09245
subclass of: SO_0000673
so part of: ZCP4_RS09245
location: complement(3440..3727)
location: region:3440-3727:-1
so has part: feature:3440-3727:-1:exon

WP_012817702.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3440-3727:-1:exon

ZCP4_RS09250
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09250
old locus tag: ZCP4_1856
so part of: sequence
location: complement(3724..4386)
location: region:3724-4386:-1
so has part: feature:3724-4386:-1:exon
subclass of: SO_0000010

79905341
type: Gene
SIO_000068: ncbigene

position:3724:-1
position: 3724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4386:-1
position: 4386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3724-4386:-1:exon

ZCP4_RS09250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09250
old locus tag: ZCP4_1856
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078127.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MPTVVVASPKGGAGKSTTAVLLGTGLAHAGAEVVMVDCDPNRSLTIWSKRGTMPQRMRVLSDVTESEIVKTIKNHDNDGKIIIVDLEGIASRLVSRAISQADLVLIPMRATTLDATIGARALQLIEEEEEALDRSIPYALVFTMTKAVKSKQHSGIEKSFREQGVDLIEPPLMERAAFSALFEFGGDLYSMPEQGNMEKAIENASLFVQAVYQRLTGDAQ
SIO_010081: ZCP4_RS09250
subclass of: SO_0000673
so part of: ZCP4_RS09250
location: complement(3724..4386)
location: region:3724-4386:-1
so has part: feature:3724-4386:-1:exon

WP_011078127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3724-4386:-1:exon

ZCP4_RS09255
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09255
old locus tag: ZCP4_1857
so part of: sequence
location: 4528..5259
location: region:4528-5259:1
so has part: feature:4528-5259:1:exon
subclass of: SO_0000010

79905342
type: Gene
SIO_000068: ncbigene

position:4528:1
position: 4528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5259:1
position: 5259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4528-5259:1:exon

ZCP4_RS09255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09255
old locus tag: ZCP4_1857
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003623751.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: SDR family oxidoreductase
translation: MTKPVAIITGGSRGIGAAIAQKLAHDGFDIAISFARSATQANAICQKIEALGCKALSIQADGSTVEGNKKVISETAKHFGRVDVLVCNAGMFSYKNIDQVSVDDINDMLNLNLRSVMVEVSEAVRHLPSGGRIILIGSTFAGRAPFAGISLYSAAKAGLRGFTKGVARDLGQKAITINVIEPGPINTDMNPADGEAFDLISSFTATKDYGQVDDIARTVSFLASSESGNITGAAIAVDGGLQA
SIO_010081: ZCP4_RS09255
subclass of: SO_0000673
so part of: ZCP4_RS09255
location: 4528..5259
location: region:4528-5259:1
so has part: feature:4528-5259:1:exon

WP_012954776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4528-5259:1:exon

ZCP4_RS09260
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09260
old locus tag: ZCP4_1858
so part of: sequence
location: complement(5357..7597)
location: region:5357-7597:-1
so has part: feature:5357-7597:-1:exon
subclass of: SO_0000010

79905343
type: Gene
SIO_000068: ncbigene

position:5357:-1
position: 5357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7597:-1
position: 7597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5357-7597:-1:exon

ZCP4_RS09260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09260
old locus tag: ZCP4_1858
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012813090.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TonB-dependent receptor
translation: MNFRALCLNTIGLSSLLSGMGTAFLSSSAWAENATSQSRNNALLFSSKASDLKKEETVPATTKQEDLIVTASRNNRMYVSSGGDLGALGNKKGLDVPFNIRSYNSSLILNQQAQTLGEVLLNDPTVRTTTGYGNYAQLFQIRGFTLYGDDVAIDGLYGVTPRQLVSPQLYDSVQVLNGASAFLNGAAPGGSAIGGNVNLVPKRATSTDITRVTGDYTSNGQGGGAVDISRRFGQDRAYGFRFNAAGMNGRTAIKGERRDDIAIAGAFDWHNEDTRIDMNMNYQKQQVFGGRSSIIVSSLGTDMPVPKTTSPSKNWGQKWAYTDLSYLFGTLNIEHDFGDHITLYGKFGAQSGQEIGNYATTTLKNSYTGDGSVGAMATAYNVLNKSTQAGVRAHFKTGFIKHEINAGGSAIWEESYAAYAMSLVGQAGNIYNPIQFTPNETYASGNMKNPGRVSMNKLYSLFFSDTMNFWDDRISLTGGFRYQNILSNSYAYGTGKLQSQYESGVISPVVGLVVHPIKHFAVYFNRIQGLSAGTTVGASYVNAGQTFAPYQSTQYEVGAKYDIGRFSASVSFYQTAMPYGMVESYGNTGLLIYTQDGKQRNRGMELTFNGKIWRGLRFNGGLTLIDAKQIRSSGGSYDGKTVIGVPDYTINGNLEYDIPFVKGLTFVGRVVSTGKQQFNNANTAHLPAWSRFDLGARYTFLVRNKPLTARIEIDNVGNQRYWDSVYQSNLIMGAPQTFKFSITADL
SIO_010081: ZCP4_RS09260
subclass of: SO_0000673
so part of: ZCP4_RS09260
location: complement(5357..7597)
location: region:5357-7597:-1
so has part: feature:5357-7597:-1:exon

WP_012954777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5357-7597:-1:exon

ZCP4_RS09265
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09265
old locus tag: ZCP4_1859
so part of: sequence
location: complement(8010..8279)
location: region:8010-8279:-1
so has part: feature:8010-8279:-1:exon
subclass of: SO_0000010

79905344
type: Gene
SIO_000068: ncbigene

position:8010:-1
position: 8010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8279:-1
position: 8279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8010-8279:-1:exon

ZCP4_RS09265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09265
old locus tag: ZCP4_1859
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012817705.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system YafQ family toxin
translation: MRKVLLERQFKKDAKKNFLEFVTPAWAEILNCLCQDVELPPKYKDHALSGNWLGFRDCHVKPDLVLIYMKNGDDYVQLVRLGSHSELFG
SIO_010081: ZCP4_RS09265
subclass of: SO_0000673
so part of: ZCP4_RS09265
location: complement(8010..8279)
location: region:8010-8279:-1
so has part: feature:8010-8279:-1:exon

WP_012954756.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8010-8279:-1:exon

ZCP4_RS09270
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09270
old locus tag: ZCP4_1860
so part of: sequence
location: complement(8272..8553)
location: region:8272-8553:-1
so has part: feature:8272-8553:-1:exon
subclass of: SO_0000010

79905345
type: Gene
SIO_000068: ncbigene

position:8272:-1
position: 8272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8553:-1
position: 8553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8272-8553:-1:exon

ZCP4_RS09270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09270
old locus tag: ZCP4_1860
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004282256.1
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system RelB/DinJ family antitoxin
translation: MATTSFNLRLDQDLRDRAFPVLERYGLSAAQAFKLFLNQVAETKTIPLSFDYAKDEPNMTTQKAMLEALRRTDFSEAFTAAETLKVLQENHDA
SIO_010081: ZCP4_RS09270
subclass of: SO_0000673
so part of: ZCP4_RS09270
location: complement(8272..8553)
location: region:8272-8553:-1
so has part: feature:8272-8553:-1:exon

WP_011078087.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8272-8553:-1:exon

ZCP4_RS09275
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09275
old locus tag: ZCP4_1861
so part of: sequence
location: complement(8663..9442)
location: region:8663-9442:-1
so has part: feature:8663-9442:-1:exon
subclass of: SO_0000010

79905346
type: Gene
SIO_000068: ncbigene

position:8663:-1
position: 8663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9442:-1
position: 9442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8663-9442:-1:exon

ZCP4_RS09275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09275
old locus tag: ZCP4_1861
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466478.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLKYFSLVLMSIMACCWQTSAWAGQCYNLARKEPSQLTGIVEYIIFPGPPNYEDVQNGDTPEPSYVLKLSNPICLSGDEFADPKNHFQSVQLVGTKATSKLLQQFLHKNVTVQLTDTMAAATGHHHEPLVATVTAVRPVSYSAPQAKAMDFIDEYGTAATTIRAFYTALGDGQGAAASALVVPEKRSTPAFLASNLTKFYGSLTDRIQLLDIAQESTNIFIVRYHYVAKSHICNGRASIMTSMRNGRNFIQSIHALNGC
SIO_010081: ZCP4_RS09275
subclass of: SO_0000673
so part of: ZCP4_RS09275
location: complement(8663..9442)
location: region:8663-9442:-1
so has part: feature:8663-9442:-1:exon

WP_012954757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8663-9442:-1:exon

ZCP4_RS09280
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09280
old locus tag: ZCP4_1863
so part of: sequence
location: 10214..11353
location: region:10214-11353:1
so has part: feature:10214-11353:1:exon
subclass of: SO_0000010

79905347
type: Gene
SIO_000068: ncbigene

position:10214:1
position: 10214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11353:1
position: 11353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10214-11353:1:exon

ZCP4_RS09280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09280
old locus tag: ZCP4_1863
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MWKILKGDGITDDLDAFKKALSSQDNIFVPKGRYYLGDTLIIPNGKSLFSFPPCGTNPPSGTVLLFLASLAKCVQIGIGTSYESGIFDGFIIERNGIYVDKTIVPEDSIGLECNNTMGAIVRNVYIIGHAIGLKSNWGITNWFEHISTTCCKKYYVEIDTTPECRFLSCRFGQNGSTDVQGQAYICATGGDTDNISNGPNTIIFNNCHFNLGGGVSLEKWFDVSKITSGHVSEIDTFQFDNCYIESVNIGLYADETVNSISFLQMNNYIVLSNKDFWGVNALTIIDNVQMSNCLIKSNFSINTNKQINFLNISNVTVFGKFTLNTPSIGEEINSVVNVSNIYAYQGITLDGKYALLTFNGNSAAGYSNNAIISGISLKI
SIO_010081: ZCP4_RS09280
subclass of: SO_0000673
so part of: ZCP4_RS09280
location: 10214..11353
location: region:10214-11353:1
so has part: feature:10214-11353:1:exon

WP_012954759.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10214-11353:1:exon

ZCP4_RS09285
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09285
old locus tag: ZCP4_1864
so part of: sequence
location: complement(11600..11914)
location: region:11600-11914:-1
so has part: feature:11600-11914:-1:exon
subclass of: SO_0000010

79905348
type: Gene
SIO_000068: ncbigene

position:11600:-1
position: 11600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11914:-1
position: 11914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11600-11914:-1:exon

ZCP4_RS09285
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09285
old locus tag: ZCP4_1864
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRKEILADGVLLAKEAKLSAEARGKISDIKQQTISAFENRQTKGISEWVTFVAAAFEDHPTPSVIKNITETKCTEASVKLPTQTELRKMLLGLLAPIEIGSPDS
SIO_010081: ZCP4_RS09285
subclass of: SO_0000673
so part of: ZCP4_RS09285
location: complement(11600..11914)
location: region:11600-11914:-1
so has part: feature:11600-11914:-1:exon

WP_252509171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11600-11914:-1:exon

ZCP4_RS09290
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09290
old locus tag: ZCP4_1865
so part of: sequence
location: complement(11998..12486)
location: region:11998-12486:-1
so has part: feature:11998-12486:-1:exon
subclass of: SO_0000010

79905349
type: Gene
SIO_000068: ncbigene

position:11998:-1
position: 11998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12486:-1
position: 12486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11998-12486:-1:exon

ZCP4_RS09290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09290
old locus tag: ZCP4_1865
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012817708.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTVRDRRIQKIDELRLWIRFQRTLRGWTARQLAEEAIKSAKRRNIELHLRQQSVSFLEGGKMKSIPSWIEYVEQAFEDNKVDSKLGEKFESPLNLKSEKISEVQTKTCPNKLKLPDEISLKKLLLALLAPVEDNIPWESKRNIANILAQRLPKGLEQISLFQ
SIO_010081: ZCP4_RS09290
subclass of: SO_0000673
so part of: ZCP4_RS09290
location: complement(11998..12486)
location: region:11998-12486:-1
so has part: feature:11998-12486:-1:exon

WP_012954761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11998-12486:-1:exon

ZCP4_RS09295
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09295
old locus tag: ZCP4_1866
so part of: sequence
location: 12931..13248
location: region:12931-13248:1
so has part: feature:12931-13248:1:exon
subclass of: SO_0000010

79905350
type: Gene
SIO_000068: ncbigene

position:12931:1
position: 12931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13248:1
position: 13248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12931-13248:1:exon

ZCP4_RS09295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09295
old locus tag: ZCP4_1866
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466425.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTIKTAENMPSVVDGEISTFKQKISNALYLYMGQMECGLRLLMERLEGIRRAGETRSRDLEKNISKDELDRFETEIIGRALSIQHTASLTKEGLTDFIQNFGSSL
SIO_010081: ZCP4_RS09295
subclass of: SO_0000673
so part of: ZCP4_RS09295
location: 12931..13248
location: region:12931-13248:1
so has part: feature:12931-13248:1:exon

WP_025443260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12931-13248:1:exon

ZCP4_RS09300
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09300
old locus tag: ZCP4_1868
so part of: sequence
location: 13373..13624
location: region:13373-13624:1
so has part: feature:13373-13624:1:exon
subclass of: SO_0000010

79905351
type: Gene
SIO_000068: ncbigene

position:13373:1
position: 13373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13624:1
position: 13624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13373-13624:1:exon

ZCP4_RS09300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09300
old locus tag: ZCP4_1868
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014849500.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2312 domain-containing protein
translation: MSSIHATEELTEKLQSIIRLEEEKARLDDQIAEAYRDLKGQKYDIKKAKLAVSRSRKGHPENSIRILINQIVNDRAMSRKLVP
SIO_010081: ZCP4_RS09300
subclass of: SO_0000673
so part of: ZCP4_RS09300
location: 13373..13624
location: region:13373-13624:1
so has part: feature:13373-13624:1:exon

WP_011078096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13373-13624:1:exon

ZCP4_RS09305
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09305
old locus tag: ZCP4_1869
so part of: sequence
location: 13731..15503
location: region:13731-15503:1
so has part: feature:13731-15503:1:exon
subclass of: SO_0000010

79905352
type: Gene
SIO_000068: ncbigene

position:13731:1
position: 13731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15503:1
position: 15503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13731-15503:1:exon

ZCP4_RS09305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09305
old locus tag: ZCP4_1869
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466427.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MTASFSSSSHFVASSPMSSSLNADLSSSDSASSATLSASSVLSPKPNLAPAPLSAELSSMSPNLVSPLEAADLSLAISASSSPSLAFPLRATILPDSSTAPLPSSPSSMSFEGSPFVDRLGRFKRGTYRSMLMQTGMSYDHAKGMADHAAEEFKKAKKREPTGATYDHQSSSLANSAHPKISASNTNIEATASASDFDEIEYFDQMVSNGVDPRDAADIARKTAIARRRDPLEIATRYKTRRRTSDPVHRDSYEVGEREKSVWKPVNPQEIGAYLEAVDQYSIKTKGLSDKAVRLLKMLFRMVDFKTGRLEPTLDTICDRVGYARATVVKLLRQLQDLGFIRWIRRSIKIKADGKGPRRKQTSNAYGFLSPKAWPDLARQVFERVMRRRNAPIPDDIDHAQEADKAETKAIIENLPPVEFMKEISGAKAPNALTDSLIELAKSIERADQREQEEQAKKAAQADQEEVKTPSQISKADTSKKPPISDNQREFNSYTLSCYNYFYNNGADQFKNEKGIKDCTARANAGSADAICDRKPDNDPFFSTLKARGYRPDQINACLENRDKRKKNGWMPLSPDETARLLIQTKQMRP
SIO_010081: ZCP4_RS09305
subclass of: SO_0000673
so part of: ZCP4_RS09305
location: 13731..15503
location: region:13731-15503:1
so has part: feature:13731-15503:1:exon

WP_023593788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13731-15503:1:exon

ZCP4_RS09970
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09970
so part of: sequence
location: 15945..16106
location: region:15945-16106:1
so has part: feature:15945-16106:1:exon
subclass of: SO_0000010

79905447
type: Gene
SIO_000068: ncbigene

position:15945:1
position: 15945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16106:1
position: 16106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15945-16106:1:exon

ZCP4_RS09970
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09970
inference: COORDINATES: protein motif:HMM:NF016724.2
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DEAD/DEAH box helicase family protein
translation: MLVDEGHHGVAESWQALKAQFPEAKIVNFSATPTRADGQIMEGYTYFYIRGDP
SIO_010081: ZCP4_RS09970
subclass of: SO_0000673
so part of: ZCP4_RS09970
location: 15945..16106
location: region:15945-16106:1
so has part: feature:15945-16106:1:exon

WP_252509172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15945-16106:1:exon

ZCP4_RS09975
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09975
so part of: sequence
location: 16517..17134
location: region:16517-17134:1
so has part: feature:16517-17134:1:exon
subclass of: SO_0000010

79905448
type: Gene
SIO_000068: ncbigene

position:16517:1
position: 16517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17134:1
position: 17134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16517-17134:1:exon

ZCP4_RS09975
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09975
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAKDSTILTCPWLPCSASLGNLSPFVQFAGRILRVIRQNAPAERQVEPVPHDLDGVEVRSQSDVHVEEILLLLDAEALAALRVLHARGYTTDDVAIAYQTLHPLPTTRVRERQALRHGLSIRVQTAARRILGERGINPNGRELDTRHLSKTNLIVMIAAINNQVNIFVSMGTGQRHNFSREMLERIYQGFDGILDAAITEVFDGD
SIO_010081: ZCP4_RS09975
subclass of: SO_0000673
so part of: ZCP4_RS09975
location: 16517..17134
location: region:16517-17134:1
so has part: feature:16517-17134:1:exon

WP_252509168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16517-17134:1:exon

ZCP4_RS09315
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09315
old locus tag: ZCP4_1871
so part of: sequence
location: 17124..17354
location: region:17124-17354:1
so has part: feature:17124-17354:1:exon
subclass of: SO_0000010

79905353
type: Gene
SIO_000068: ncbigene

position:17124:1
position: 17124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17354:1
position: 17354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17124-17354:1:exon

ZCP4_RS09315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09315
old locus tag: ZCP4_1871
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIKSLVTHVEIDIAGKAHNFQASAKHRIEKGDVRLKVRNSRSWDHYCLNCAKKIIERDIKKLKAIQDRLTAVSQP
SIO_010081: ZCP4_RS09315
subclass of: SO_0000673
so part of: ZCP4_RS09315
location: 17124..17354
location: region:17124-17354:1
so has part: feature:17124-17354:1:exon

WP_012954765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17124-17354:1:exon

ZCP4_RS09325
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09325
old locus tag: ZCP4_1872
so part of: sequence
location: 17552..17953
location: region:17552-17953:1
so has part: feature:17552-17953:1:exon
subclass of: SO_0000010

79905354
type: Gene
SIO_000068: ncbigene

position:17552:1
position: 17552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17953:1
position: 17953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17552-17953:1:exon

ZCP4_RS09325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09325
old locus tag: ZCP4_1872
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTHDIEIGEFNPECSILFLGSGFSLGASNIANGNPPNGRGLRRHFIEQLNLPADTDYDLQVLSEEFAEHDSGRLRDELYRIFRLTKLTPGQTAVLNEPWRRIYSTNYDDAVELHRSEKKLPPNAYDVSEKVLM
SIO_010081: ZCP4_RS09325
subclass of: SO_0000673
so part of: ZCP4_RS09325
location: 17552..17953
location: region:17552-17953:1
so has part: feature:17552-17953:1:exon

WP_012954766.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17552-17953:1:exon

ZCP4_RS09330
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09330
old locus tag: ZCP4_1873
so part of: sequence
location: 17965..18615
location: region:17965-18615:1
so has part: feature:17965-18615:1:exon
subclass of: SO_0000010

79905355
type: Gene
SIO_000068: ncbigene

position:17965:1
position: 17965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18615:1
position: 18615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17965-18615:1:exon

ZCP4_RS09330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09330
old locus tag: ZCP4_1873
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSRWYDQFQRDLAFASTLYIVGYSLADYHIAGLLMADPKIAERTIFIQGPAVDQTFLRRTVNYGRTMFIGTDGFAESIARAQRAVAPSLDNLRSFRSLSPVRDKKTVARPTATEIFDLLVYGNFDPARLARSQPNEDYAIARADSVRTAADAVESKASLVVDGRLGNGKSIFLHLLAFELSSRGWICLKLQSGHPDLQRDVSALAEVDKLVVFID
SIO_010081: ZCP4_RS09330
subclass of: SO_0000673
so part of: ZCP4_RS09330
location: 17965..18615
location: region:17965-18615:1
so has part: feature:17965-18615:1:exon

WP_144081079.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17965-18615:1:exon

ZCP4_RS09335
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09335
old locus tag: ZCP4_1874
so part of: sequence
location: 18784..19944
location: region:18784-19944:1
so has part: feature:18784-19944:1:exon
subclass of: SO_0000010

79905356
type: Gene
SIO_000068: ncbigene

position:18784:1
position: 18784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19944:1
position: 19944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18784-19944:1:exon

ZCP4_RS09335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09335
old locus tag: ZCP4_1874
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVAFGRLCESAGLRGPDVDHRGDLRDVLLDLFKSTAIRERVTEALAPLFENRATRRILTMTMLIATHQGSISASFVRNVVGEDPFMALKPLADLSYEIFEASADGFRARSSIFSSFVIAEFIEAEEIADVVVEVTLAAAQRRVERPYRILMSKMIAYSSLRRILCGKGNPDAVIANIYERLRYDERVNGEPLFWLQYAIAMVEKSRLDAANEFIATAYRKAEELSGFQTYQIDTQAFRIALMSAMEHRAGQTISNLDAILSGFERINAMLGDESHRSYAVKVLEHVQPFVMARIDDLANGERTSVQFWLLKVEKSLSLLPDEFKSASGSEGVRKSVETAAKMFISSNVDLYVRSMSLGFLIALRRMPFFVPVAMLMTSLLEWIGHA
SIO_010081: ZCP4_RS09335
subclass of: SO_0000673
so part of: ZCP4_RS09335
location: 18784..19944
location: region:18784-19944:1
so has part: feature:18784-19944:1:exon

WP_144081080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18784-19944:1:exon

ZCP4_RS09340
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09340
old locus tag: ZCP4_1875
pseudo: true
so part of: sequence
location: 20005..>20993
location: region:20005-20993:1
so has part: feature:20005-20993:1:exon
subclass of: SO_0000010

79905357
type: Gene
SIO_000068: ncbigene

position:20005:1
position: 20005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20993:1
position: 20993
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20005-20993:1:exon

ZCP4_RS09340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09340
old locus tag: ZCP4_1875
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012553139.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS701 family transposase
SIO_010081: ZCP4_RS09340
subclass of: SO_0000673
so part of: ZCP4_RS09340
location: 20005..>20993
location: region:20005-20993:1
so has part: feature:20005-20993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20005-20993:1:exon

ZCP4_RS09980
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09980
so part of: sequence
location: 22803..22895
location: region:22803-22895:1
so has part: feature:22803-22895:1:exon
subclass of: SO_0000010

79905449
type: Gene
SIO_000068: ncbigene

position:22803:1
position: 22803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22895:1
position: 22895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22803-22895:1:exon

ZCP4_RS09980
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09980
inference: COORDINATES: protein motif:HMM:NF024736.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MLYVLRTDCPWRDMHERYGKWNSVYVRFRR
SIO_010081: ZCP4_RS09980
subclass of: SO_0000673
so part of: ZCP4_RS09980
location: 22803..22895
location: region:22803-22895:1
so has part: feature:22803-22895:1:exon

WP_252509169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22803-22895:1:exon

ZCP4_RS09350
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09350
old locus tag: ZCP4_1877
so part of: sequence
location: 23529..24617
location: region:23529-24617:1
so has part: feature:23529-24617:1:exon
subclass of: SO_0000010

79905358
type: Gene
SIO_000068: ncbigene

position:23529:1
position: 23529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24617:1
position: 24617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23529-24617:1:exon

ZCP4_RS09350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09350
old locus tag: ZCP4_1877
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012817724.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MKQMPGFVTASSFLPKAYSLPGAGRSLRITYLSTNGVTGQGLVPVTAEVILPAGKAPAGGWPIVAWAHGTVGVSNNCAPSRNPWSERNSRYLSEWMKRGFAIVATDYQGLGTPLPHPYLNTRAEAYGLLDAVRAAISSAAPLENKIMIVGQSQGGGAAFASAAFAPKYAPELNIRGIVATGTPYMTPELLKQITKPSDNMAYNPMVVYSLYLAQGFAGYHPSFKPREIFTPRAMPAYRAAAKVCVGPLTAKVKKEGLNFDNSLKPDFSEKIAPALAAMQYPTMKLKYPLFTGTGELDKDVPPALQLALVKAACAAGTTVEAHLYKGLDHSQTVNASLPDSAVFTNAVMSGKTITSQCEAVPQ
SIO_010081: ZCP4_RS09350
subclass of: SO_0000673
so part of: ZCP4_RS09350
location: 23529..24617
location: region:23529-24617:1
so has part: feature:23529-24617:1:exon

WP_252509170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23529-24617:1:exon

ZCP4_RS09355
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09355
old locus tag: ZCP4_1878
so part of: sequence
location: complement(24828..27944)
location: region:24828-27944:-1
so has part: feature:24828-27944:-1:exon
subclass of: SO_0000010

79905359
type: Gene
SIO_000068: ncbigene

position:24828:-1
position: 24828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27944:-1
position: 27944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24828-27944:-1:exon

ZCP4_RS09355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09355
old locus tag: ZCP4_1878
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012817697.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFWSLFSDELSRRLRSWVPWLLMVVLVCYTASALLGADTSDLGGGGVPHNGSFVIYYWGMYSAFWVAVLGPLLMAAPLLRDIRTKMAPLVYTTPISKEGYFWGKYMAGMVITVMVMMSVPVTIIVIPWIAHALGGGQMFGHFTLWNHIGWTTVIWVLPACFIYGSIHFALAARSGRLLFCYGFALLSMAVFTLFFVSFKASAGHHTWVELIDPIGKQTLDAQALFWSMPERTAHFLSPSMILISNRILWITIGAICLIWGAASFRLEDMLNKGRKSSPSSSHRKHPPRPLFYIKSDSRLGLLLHLASIHWSATIRLPVFRVIVAALVVLGLTSAWGAESAYALPENQMRPYAQYLFTVVQPSLYMILAMAMIYFAGEIAARDRESKMLSLISATSVPGNVLIGGRLIAIMYMALLFSLLPSLSIIIFQFSNGFLETEPQHFIRSIFLHLFLPLIEFGALTLALDLLTHKKLFAQGLPLILLWGGIAMHETGTINERLALFGVPQPMIFSAFSVLDADTWRHLLYAAWWLGIVGIIVVLASHIDLRGEQKPLYIRIRHITIKWPACTSIAAMLIVTLTAGATIHRNLYEVNDTQSLQEDYRDQALYEQLYGQWRNQPRPLITEMALATSVNPAKGLLTTQGKWTVSNPDSNPITAILVNIPENSRLKLANKSLGLSLRHDDHRERVQIYRFDHPLAAGDKTTIDFTLHSRWQGFVDGAFAWPIGRDVVILDNNAFPRLNYDRKRELAETNERFRHHLPSRPLPVDDPSRSTLNDSAGRVAIDIKISAPSDFHLYTSGISSTEQIHDGQHILEAKADNAPLDPLIIAVKGVEKKQLLWRHPKSAPIPISFTFRKNHGQALDAISKETLLVLDHLARRFGSPPFQALNIVETPQFIDEEALAEARSSGSLLYIPERRGWLHDMRRPQARAYLTFTLGREMGRSWYHARFLAPSSPHAMAMEEGFPIALGLEAVATQYDQKTTSDFLGILQEKQQKMKAASKILPRNPSDITDQPYAALQTGIDLFYRWHPDFKIDSNNHKN
SIO_010081: ZCP4_RS09355
subclass of: SO_0000673
so part of: ZCP4_RS09355
location: complement(24828..27944)
location: region:24828-27944:-1
so has part: feature:24828-27944:-1:exon

WP_012954771.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24828-27944:-1:exon

ZCP4_RS09360
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09360
old locus tag: ZCP4_1879
so part of: sequence
location: complement(27944..28831)
location: region:27944-28831:-1
so has part: feature:27944-28831:-1:exon
subclass of: SO_0000010

79905360
type: Gene
SIO_000068: ncbigene

position:28831:-1
position: 28831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27944-28831:-1:exon

ZCP4_RS09360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09360
old locus tag: ZCP4_1879
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014466433.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MLRLSGVSKIYPGKNPVHALNNVSLNVPSGIFGLLGPNGAGKSTLMSIIATLQRPDRGSIHLGEIDALASPREMRAKLGYLPQDFGTYPGASAEELLHYFARLKGISNAAEREHQIGTLLEMVNLDAAKNRPVSDYSGGMRQRFGVAQALLGHPKLLIVDEPTAGLDPAERNRFNQILANIGENTAIILSTHIIEDVSNLCRRIAVINQGRIMAEGDPEKLTASLSGQLWQALVDRERADQISKSGQLVFRRIHRGLHLVVIQSETQPAEDFTPKIPDLEDAYFLAVLQKNDGGN
SIO_010081: ZCP4_RS09360
subclass of: SO_0000673
so part of: ZCP4_RS09360
location: complement(27944..28831)
location: region:27944-28831:-1
so has part: feature:27944-28831:-1:exon

WP_025443265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27944-28831:-1:exon

ZCP4_RS09365
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09365
old locus tag: ZCP4_1880
so part of: sequence
location: complement(28900..30615)
location: region:28900-30615:-1
so has part: feature:28900-30615:-1:exon
subclass of: SO_0000010

79905361
type: Gene
SIO_000068: ncbigene

position:28900:-1
position: 28900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30615:-1
position: 30615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28900-30615:-1:exon

ZCP4_RS09365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09365
old locus tag: ZCP4_1880
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012817699.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MKIYKLMMEIAGSYARYFRRSLVYTIIATLIQVASYAVLVPLMMAICHDKPNTEIWSWVGFYAATIVVEVFFRLKSMNFNYQYWPCVIGEQRIRLAEALYKMPLLQLREKDVGDLSEIMGSNVMNAANALSSLANIFVEVVSLPILLWVAITLFDYRMGLILAVSLIAMLPILYKIQAIYNSSSADLDRADAESASRIIEYVKGIAVFKATSQAGAKSPRLEAVFHDQQDIQSHGNKSSASYISLCQFIVQLALVILIAFAGYLAQKHSLNIPKTVALVIIAVHIIEPLNTIAAISKLFEIAEISLQRIKNILNSKGLPQLQPQAVPQKFDINFNQVTFEYPDSPVVLHDIDLALPSESLTGVVGSSGCGKTTLVQLIARFADPTKGEIKIGGVDIRSLTQSRLSSLLSIVYQDVWLFNDTIRANILMGRPEATEEELIHAAQSANIHDFICSLPQGYDTLVGEVGSSLSGGERQRISIARAILKNTPIIILDEPTASLDSESEYAVQRAISSLIKGKTVIMVAHRLNTLTAADKIIVLDRGSIIEEGCHEYLIKNKSYYYNMWNTQLKLT
SIO_010081: ZCP4_RS09365
subclass of: SO_0000673
so part of: ZCP4_RS09365
location: complement(28900..30615)
location: region:28900-30615:-1
so has part: feature:28900-30615:-1:exon

WP_012954772.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28900-30615:-1:exon

ZCP4_RS09370
type: Gene
subclass of: SO_0000704
RO_0002162: 627343
locus tag: ZCP4_RS09370
old locus tag: ZCP4_1881
so part of: sequence
location: complement(30612..32390)
location: region:30612-32390:-1
so has part: feature:30612-32390:-1:exon
subclass of: SO_0000010

79905362
type: Gene
SIO_000068: ncbigene

position:30612:-1
position: 30612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32390:-1
position: 32390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30612-32390:-1:exon

ZCP4_RS09370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 627343
locus tag: ZCP4_RS09370
old locus tag: ZCP4_1881
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011078123.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ABC transporter ATP-binding protein
translation: MRGFEVVTRLVALLPIVKSKIRLGMILGILAGFSTVIGLSLSAYAVSQLCEPITKNFWMYLAGGLAGLSGGFGLRSMADLTTHEASYRLEVKIRENIADRLASLPLGDIYQLGAGRIKKIMHNDVKGLHAAVADASPFVGVGFSQPLAALLVLLIIQWKMFLVVSLMLPVIGLCMYFMTRDFAEQQKRYNNASEAVNTAVIEFVQGMPVIRTFDGDRLALKRFKGIIDTFTRTVSVWLAFSRQSSKLNNIFITPLPTLLLISACGIFMLQCHWISFSNFLLAMMIGSLPVQAVMPLMYLSQMLSEAKAAASRICELLDMKPLPEPAHPQIPHQFDITFDHVRFSYNNDTRKPALDDISFVVPEKTVCALVGASGSGKSTVARLIPRFWDVTNGSIRLGNIDIRDINSQVLLQHIAFVFQEPFLVSGSVAENIALADPNASDEQIKKAAQMAQAEDFILNLEEGYQTQVGDGGNRLSGGQRQRITIARALLSKASIVILDEPTAWVDPESEAKIQMALKTLSQHKTVIVIAHRLATIMDADQILVMEKGHIVEGGRHAELLQKQGKYAEIWQHYQESSHWHLDKGKKDSGGLS
SIO_010081: ZCP4_RS09370
subclass of: SO_0000673
so part of: ZCP4_RS09370
location: complement(30612..32390)
location: region:30612-32390:-1
so has part: feature:30612-32390:-1:exon

WP_012954773.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30612-32390:-1:exon