Schistosoma haematobium chromosome 6, whole genome shotgun sequence.
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma.
High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing
Whole-genome sequence of Schistosoma haematobium
Chromosome-level genome assembly for S. haematobium
Submitted (18-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (04-JUN-2021) Parasite Genetics & Genomics, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Cnr Flemington Rd & Park Dr, Parkville, VIC 3010, Australia
Submitted (28-APR-2012) 2nd Office Building, Beijing Genomics Institute, Beishan Road, Yantian, Shenzhen, Guangdong 518083, P.R.China
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM039148.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: MAR-2021\nAssembly Method :: Canu v. 1.9; Medaka v. 1.0.3;\n purge_haplotigs v. 1.1.1; Platanus-allee\n v. 2.0.2; HiRise v. 2.0.5; pilon v. 1.23;\n 3D-DNA v. 180922; Juicebox Assembly Tools\n v. 1.22; TGS-GapCloser v. 1.0.3; HyPo v.\n 1.0.3\nAssembly Name :: UoM_Shae.V3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 130.0x\nSequencing Technology :: Illumina; Oxford Nanopore; PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
20 whole worms (paired) and a single pair of adult worms (i.e. male and female in copula)
EggNog:ENOG410VG0P; COG:G; CAZy:GH5_27; CAZy:GH5; CAZy:GH5_29; CAZy:GH5_28
EggNog:ENOG410V7CS; COG:A; SECRETED:SignalP(1-18)
EggNog:ENOG410V68H; COG:S; BUSCO:EOG091G0I85
Hippocampus abundant transcript 1 protein, variant 2
Hippocampus abundant transcript 1 protein
pre-rRNA processing and 40S ribosomal subunit assembly
EggNog:ENOG410V6X7; COG:O; MEROPS:MER0000430; SECRETED:SignalP(1-20)
G2-specific protein kinase nim-1, variant 2
Origin recognition complex subunit 3, variant 3
Origin recognition complex subunit 3, variant 2
EggNog:ENOG410V5ZV; COG:L; BUSCO:EOG091G0AI5
EggNog:ENOG410VDWZ; COG:J; BUSCO:EOG091G0KNT
Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C), variant 2
EggNog:ENOG410VIHG; COG:K; BUSCO:EOG091G0W26
Arginyl-tRNA--protein transferase 1, variant 2
EggNog:ENOG410V7V5; COG:O; BUSCO:EOG091G09MU
EggNog:ENOG410V9Y3; COG:J; BUSCO:EOG091G0BTX
ATP-dependent RNA helicase dbp4, variant 2
EggNog:ENOG4112PFC; COG:A; SECRETED:SignalP(1-24)
EggNog:ENOG411334U; COG:C; BUSCO:EOG091G05LX
Cytochrome c oxidase assembly factor 7, variant 2
Inactive hydroxysteroid dehydrogenase-like protein 1
Inactive hydroxysteroid dehydrogenase-like protein 1, variant 2
Inactive hydroxysteroid dehydrogenase-like protein 1, variant 3
ATP-dependent RNA helicase ddx24, variant 2
EggNog:ENOG410V947; COG:S; BUSCO:EOG091G090D
EggNog:ENOG410VA5T; COG:T; BUSCO:EOG091G0L3L
putative pterin-4-alpha-carbinolamine dehydratase, variant 3
putative pterin-4-alpha-carbinolamine dehydratase, variant 2
putative pterin-4-alpha-carbinolamine dehydratase
EggNog:ENOG410V4RK; COG:S; MEROPS:MER0042914
Guanine nucleotide-binding protein G(o) subunit alpha
F-box/WD repeat-containing protein 10, variant 2
tripeptidyl-peptidase II Tpp2, variant 2
EggNog:ENOG410V8N6; COG:O; MEROPS:MER0011484
EggNog:ENOG410V8E2; COG:A; BUSCO:EOG091G146E
EggNog:ENOG4101MTV; SECRETED:SignalP(1-19)
transcription initiation factor TFIID subunit 8
Immunoglobulin (CD79A) binding protein 1
Immunoglobulin (CD79A) binding protein 1, variant 2
EggNog:ENOG410V8DV; COG:T; BUSCO:EOG091G0ELO
EggNog:ENOG410V8YJ; COG:U; BUSCO:EOG091G05OW
EggNog:ENOG410VAME; COG:J; BUSCO:EOG091G06QP; SECRETED:SignalP(1-17)
EggNog:ENOG410VAME; COG:J; BUSCO:EOG091G06QP
EggNog:ENOG410JF3E; COG:T; SECRETED:SignalP(1-23)
EggNog:ENOG41KOG0621; COG:M; SECRETED:SignalP(1-31)
EggNog:ENOG410V56X; COG:I; MEROPS:MER0208659
Ubiquitin carboxyl-terminal hydrolase 36
EggNog:ENOG410V5SU; COG:O; MEROPS:MER0024824
V-type proton ATPase catalytic subunit A
V-type proton ATPase catalytic subunit A, variant 2
EggNog:ENOG410Q8UX; SECRETED:SignalP(1-17)
EggNog:ENOG410VCNS; COG:S; BUSCO:EOG091G07PR
Tubulin--tyrosine ligase-like protein 12
Tubulin--tyrosine ligase-like protein 12, variant 2
Vacuolar protein sorting-associated protein 35, variant 2
Vacuolar protein sorting-associated protein 35
Vacuolar protein sorting-associated protein 35, variant 3
EggNog:ENOG410VD4E; COG:U; BUSCO:EOG091G0OHF
ATP dependent transporter multidrug resistance (SNQ2)
ATP dependent transporter multidrug resistance (SNQ2), variant 2
EggNog:ENOG410V5M6; COG:A; BUSCO:EOG091G0PNP
cAMP-specific 3',5'-cyclic phosphodiesterase 4D
cAMP-specific 3',5'-cyclic phosphodiesterase 4D, variant 2
cAMP-specific 3',5'-cyclic phosphodiesterase 4D, variant 3
EggNog:ENOG410VCBP; COG:F; BUSCO:EOG091G0CTG
Serine/threonine-protein phosphatase 2B catalytic subunit 3, variant 2
Serine/threonine-protein phosphatase 2B catalytic subunit 3
EggNog:ENOG410V5FA; COG:V,W; SECRETED:SignalP(1-24)
EggNog:ENOG410VQ35; COG:S; SECRETED:SignalP(1-20)
Type II inositol 1,4,5-trisphosphate 5-phosphatase
Type II inositol 1,4,5-trisphosphate 5-phosphatase, variant 2
EggNog:ENOG410V9IJ; COG:J; BUSCO:EOG091G0E3V
EggNog:ENOG410XBC0; COG:S; BUSCO:EOG091G0CXE
Coiled-coil domain-containing protein 33
EF-hand calcium-binding domain-containing protein 9
Methionine--tRNA ligase, mitochondrial, variant 2
Ubiquitin carboxyl-terminal hydrolase 10
EggNog:ENOG4112NWI; COG:O; MEROPS:MER0004439
Ubiquitin carboxyl-terminal hydrolase 10, variant 2
Regulation of nuclear pre-mRNA domain containing protein 1B
DNA replication licensing factor, mcm4 component
RNA binding motif, single stranded interacting protein 3
RNA binding motif, single stranded interacting protein 3, variant 2
EggNog:ENOG410VB6P; COG:T; MEROPS:MER0024969; SECRETED:SignalP(1-17)
Large neutral amino acids transporter small subunit 1
Large neutral amino acids transporter small subunit 1, variant 2
WD repeat domain phosphoinositide-interacting protein 3
WD repeat domain phosphoinositide-interacting protein 3, variant 2
EggNog:ENOG410MWIR; COG:S; with sequence similarity 54, member A
CCR4-NOT transcription complex subunit 2
EggNog:ENOG410VAR8; COG:K; BUSCO:EOG091G0C7Y
EggNog:ENOG410VJ4P; COG:A; BUSCO:EOG091G0ZLI
Chromodomain-helicase DNA-binding protein
biogenesis of lysosome- organelles complex 1 subunit 2
biogenesis of lysosome- organelles complex 1 subunit 2, variant 2
mitotic spindle checkpoint protein Bub3, variant 2
Retinoblastoma-like protein 1, variant 2
Eukaryotic translation initiation factor 1A, X-chromosomal
Cytochrome c oxidase assembly protein cox11, mitochondrial
Cytochrome c oxidase assembly protein cox11, mitochondrial, variant 4
Cytochrome c oxidase assembly protein cox11, mitochondrial, variant 3
Cytochrome c oxidase assembly protein cox11, mitochondrial, variant 2
EggNog:ENOG410VA6F; COG:O; BUSCO:EOG091G0J14
EggNog:ENOG4103EV3; COG:E; MEROPS:MER0036367
EggNog:ENOG410VC17; COG:E; SECRETED:SignalP(1-21)
EggNog:ENOG410V9J2; COG:S; SECRETED:SignalP(1-24)
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2
Metallo-beta-lactamase domain-containing protein 1
Metallo-beta-lactamase domain-containing protein 1, variant 2
NF-kappa-B inhibitor-interacting Ras-like protein 2
NF-kappa-B inhibitor-interacting Ras-like protein 2, variant 2
EggNog:ENOG410VIKR; SECRETED:SignalP(1-22)
EggNog:ENOG410VIKR; SECRETED:SignalP(1-27)
Potassium voltage-gated channel sub B member 1
Potassium voltage-gated channel sub B member 1, variant 2
EggNog:ENOG41KOG3713; COG:P; MEROPS:MER0033235; SECRETED:SignalP(1-20)
EggNog:ENOG41038W9; COG:S; BUSCO:EOG091G0YBP
EggNog:ENOG410VHIR; COG:B; SECRETED:SignalP(1-17)
EggNog:ENOG410V9J2; COG:S; SECRETED:SignalP(1-25)
EggNog:ENOG4113KC2; COG:T; SECRETED:SignalP(1-21)
EggNog:ENOG410VBW4; COG:S; MEROPS:MER0187565
nucleoside triphosphate pyrophosphohydrolase ham1
nucleoside triphosphate pyrophosphohydrolase ham1, variant 2
EggNog:ENOG410VDCF; COG:F; BUSCO:EOG091G0MUD
AT-rich interactive domain-containing protein 1B
Trafficking protein particle complex subunit 3
Trafficking protein particle complex subunit 3, variant 2
EggNog:ENOG410VEWF; COG:S; BUSCO:EOG091G0SM9
EggNog:ENOG410V9B7; COG:S; BUSCO:EOG091G02BK
putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase
putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase, variant 2
EggNog:ENOG410N14B; COG:I,K,O,T; CAZy:GT59; BUSCO:EOG091G0A27
EggNog:ENOG410VEQ1; COG:S; SECRETED:SignalP(1-26)
EggNog:ENOG410VEQ1; COG:S; SECRETED:SignalP(1-23)
EggNog:ENOG41KOG3525; COG:O; MEROPS:MER0000376; SECRETED:SignalP(1-18)
EggNog:ENOG410V494; COG:S; BUSCO:EOG091G0U3W
Cilia- and flagella-associated protein 20
EggNog:ENOG410V824; COG:J; BUSCO:EOG091G07OD
tRNA-dihydrouridine(20) synthase [NAD(P)+]-like
Leucine-rich repeat-containing protein 57
ATP-binding cassette sub- F member 1, variant 2
ATP-binding cassette sub- F member 1, variant 3
ATP-binding cassette sub- F member 1, variant 4
Glycosylphosphatidylinositol anchor attachment 1 protein, variant 2
Glycosylphosphatidylinositol anchor attachment 1 protein
EggNog:ENOG410VA9Q; COG:O; BUSCO:EOG091G0703
TATA box-binding protein-like protein 1, variant 2
EggNog:ENOG410V8CP; COG:J; BUSCO:EOG091G0BKZ
Gamma-aminobutyric acid receptor subunit beta-3
Mitochondrial pyruvate carrier 2, variant 2
EggNog:ENOG410344T; COG:U; MEROPS:MER0019701; BUSCO:EOG091G0EHF
EggNog:ENOG410V822; SECRETED:SignalP(1-21)
kinetochore-associated Ndc80 complex subunit ndc80
kinetochore-associated Ndc80 complex subunit ndc80, variant 2
Serine/threonine-protein kinase/endoribonuclease IRE1
Serine/threonine-protein kinase/endoribonuclease IRE1, variant 2
Golgi reassembly-stacking protein 2, variant 2
NEDD8-activating enzyme E1 regulatory subunit, variant 2
NEDD8-activating enzyme E1 regulatory subunit
NEDD8-activating enzyme E1 regulatory subunit, variant 3
ATP-binding cassette sub- B member 7, mitochondrial
Gamma-aminobutyric acid receptor-associated protein-like 2
Gamma-aminobutyric acid receptor-associated protein-like 2, variant 2
Coiled-coil domain-containing protein 94
Coiled-coil domain-containing protein 94, variant 2
Coiled-coil domain-containing protein 94, variant 3
EggNog:ENOG410VBVA; COG:O; BUSCO:EOG091G02B4
EggNog:ENOG410V9AY; COG:U; BUSCO:EOG091G0GY1
GTPase activating protein (SH3 domain) binding protein
GTPase activating protein (SH3 domain) binding protein, variant 2
GTPase activating protein (SH3 domain) binding protein, variant 3
GTPase activating protein (SH3 domain) binding protein, variant 4
AN1-type zinc finger protein 1, variant 2
EggNog:ENOG410VF45; COG:S; SECRETED:SignalP(1-25)
Interleukin-1 receptor-associated kinase 1 binding protein 1
EggNog:ENOG410VIDH; COG:Z; BUSCO:EOG091G0WT4
Mitochondrial import receptor subunit TOM22, variant 2
Mitochondrial import receptor subunit TOM22
EggNog:ENOG41KOG4111; COG:U; BUSCO:EOG091G0XN1
Diphthamide biosynthesis protein 1, variant 2
Bifunctional glutamate/proline--tRNA ligase
Bifunctional glutamate/proline--tRNA ligase, variant 2
C2 domain-containing protein 3, variant 2
Craniofacial development protein 1, variant 2
EggNog:ENOG410VEIB; COG:S; BUSCO:EOG091G0SU6
EggNog:ENOG410VDZ1; COG:W; BUSCO:EOG091G08JE
Transient receptor putative cation channel sub M member 3
EggNog:ENOG410VIKR; SECRETED:SignalP(1-25)
Dynein assembly factor 3, axonemal, variant 2
camp-dependent protein kinase catalytic subunit
EggNog:ENOG410VDK1; COG:P; SECRETED:SignalP(1-22)
mitogen-activated protein kinase 8 interacting protein 3
Cell division protein kinase 1, variant 2
Squamous cell carcinoma antigen recognized by T-cells 3
Squamous cell carcinoma antigen recognized by T-cells 3, variant 2
cGMP-dependent protein kinase 1, variant 2
cGMP-dependent protein kinase 1, variant 3
cGMP-dependent protein kinase 1, variant 4
G elongation factor, mitochondrial 2, variant 2
Ethanolamine-phosphate cytidylyltransferase
EggNog:ENOG410V6QP; COG:L; SECRETED:SignalP(1-20)
Reticulocalbin 2, EF-hand calcium binding domain
Transmembrane 9 super member 3, variant 2
Transmembrane 9 super member 3, variant 3
Transmembrane 9 super member 3, variant 4
Transmembrane 9 super member 3, variant 5
Transmembrane 9 super member 3, variant 6
Transmembrane 9 super member 3, variant 7
EggNog:ENOG410VBEM; COG:U; BUSCO:EOG091G03BV; SECRETED:SignalP(1-18)
EggNog:ENOG41033DC; COG:U; BUSCO:EOG091G03BV
EggNog:ENOG410VBEM; COG:U; SECRETED:SignalP(1-18)
Transmembrane 9 super member 3, variant 8
Eukaryotic translation initiation factor 4B
Eukaryotic translation initiation factor 4B, variant 2
Histone-lysine N-methyltransferase, H3 lysine-79 specific
Histone-lysine N-methyltransferase, H3 lysine-79 specific, variant 2
ubiquinol-cytochrome c reductase core subunit 1
EggNog:ENOG41KOG2583; COG:C; MEROPS:MER0003544
WD repeat-containing protein 36, variant 2
Rho guanine nucleotide exchange factor 6, variant 2
Rho guanine nucleotide exchange factor 6
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt3b
btaf1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
EggNog:ENOG410324F; COG:O; MEROPS:MER0022887
EggNog:ENOG410XBHP; COG:O; MEROPS:MER0022887
EggNog:ENOG4113RH3; COG:J; BUSCO:EOG091G0QS6
EggNog:ENOG410XET2; COG:A; BUSCO:EOG091G0HAI
DDB1- and CUL4-associated factor 12, variant 2
Programmed cell death protein 6, variant 2
N6-adenosine-methyltransferase subunit mettl14
EggNog:ENOG410V7KR; COG:K; MEROPS:MER0018608
N6-adenosine-methyltransferase subunit mettl14, variant 2
centractin- actin- protein of the dynactin complex
Trafficking protein particle complex subunit 2-like protein
EggNog:ENOG410VHPR; COG:U; BUSCO:EOG091G0SQV
Chromodomain-helicase-DNA-binding protein 1-like
cGMP-dependent protein kinase, isozyme 1, variant 2
cGMP-dependent protein kinase, isozyme 1
EggNog:ENOG410V53Z; COG:S; BUSCO:EOG091G0A19
Major facilitator super domain-containing protein 1
Major facilitator super domain-containing protein 1, variant 2
EggNog:ENOG410VB5R; COG:T; BUSCO:EOG091G054P
DNA methyltransferase 1-associated protein 1
DNA methyltransferase 1-associated protein 1, variant 2
EggNog:ENOG410VBS5; COG:B,K; BUSCO:EOG091G0B27
DNA methyltransferase 1-associated protein 1, variant 3
EggNog:ENOG410VEEV; COG:E; MEROPS:MER0000183; SECRETED:SignalP(1-24)
EggNog:ENOG410VCYA; COG:S; BUSCO:EOG091G05SE
Protein transport protein Sec16A, variant 2
Protein transport protein Sec16A, variant 3
EggNog:ENOG410V9J2; COG:S; SECRETED:SignalP(1-26)
EggNog:ENOG410V9J2; COG:S; SECRETED:SignalP(1-21)
WW domain containing E3 ubiquitin protein ligase 1
WW domain containing E3 ubiquitin protein ligase 1, variant 2
EggNog:ENOG410V46G; COG:O; BUSCO:EOG091G09KI
54S ribosomal protein L23, mitochondrial, variant 2
54S ribosomal protein L23, mitochondrial, variant 3
54S ribosomal protein L23, mitochondrial
54S ribosomal protein L23, mitochondrial, variant 4
EggNog:ENOG410VI4H; COG:J; BUSCO:EOG091G16EY
EggNog:ENOG410V5RT; COG:Z; BUSCO:EOG091G0FIJ
18S rRNA pseudouridine methyltransferase
18S rRNA pseudouridine methyltransferase, variant 2
EggNog:ENOG410VCZP; COG:J; BUSCO:EOG091G0PXB
mitochondrial 54S ribosomal protein mrpl1
S-adenosylmethionine synthase isoform type-1
ADP-ribosylation factor-like protein 2-binding protein
PDZ domain-containing protein gipc3, variant 2
EggNog:ENOG410V7H8; COG:T,U; SECRETED:SignalP(1-18)
EggNog:ENOG410VCAW; COG:G; SECRETED:SignalP(1-21)
Heteroproteinous nuclear ribonucleoprotein H
Heteroproteinous nuclear ribonucleoprotein H, variant 2
Serrate RNA effector molecule, variant 2
EggNog:ENOG410V6R9; COG:K; BUSCO:EOG091G06J6
Ubiquitin carboxyl-terminal hydrolase 51
EggNog:ENOG410VA1S; COG:O; MEROPS:MER0006257
Eukaryotic translation initiation factor 4E-binding protein 2
EggNog:ENOG410V8IG; COG:T; MEROPS:MER1076186
ATP synthase mitochondrial F1 complex assembly factor 2
ATP synthase mitochondrial F1 complex assembly factor 2, variant 3
ATP synthase mitochondrial F1 complex assembly factor 2, variant 2
EggNog:ENOG410V7B1; COG:C; BUSCO:EOG091G0GQO
Phosphatidylinositol-binding clathrin assembly protein unc-11
Phosphatidylinositol-binding clathrin assembly protein unc-11, variant 2
X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
CCR4-Not complex caf1 ribonuclease subunit Caf1
CCR4-Not complex caf1 ribonuclease subunit Caf1, variant 2
DNA-directed RNA polymerase II subunit rpb4
EggNog:ENOG410VE8P; COG:I; SECRETED:SignalP(1-20)
Ubiquitin carboxyl-terminal hydrolase 16
EggNog:ENOG410VDDJ; COG:O; MEROPS:MER0014768
EggNog:ENOG410W44A; COG:O; BUSCO:EOG091G0V3C
Ubiquitin-conjugating enzyme E2 J1, variant 2
Diphthamide biosynthesis protein 2, variant 2
EggNog:ENOG410V6WI; COG:F; BUSCO:EOG091G0U75
Mitotic spindle assembly checkpoint protein MAD1
Store-operated calcium entry-associated regulatory factor
Store-operated calcium entry-associated regulatory factor, variant 2
EggNog:ENOG410VAKU; COG:U; SECRETED:SignalP(1-17)
Sterile alpha motif domain-containing protein 15
sterile alpha motif domain containing 15
EggNog:ENOG410V7QN; COG:C; BUSCO:EOG091G08RU
EggNog:ENOG410V4H4; COG:V; MEROPS:MER0018990
EggNog:ENOG410V4H4; COG:V; MEROPS:MER0023865
LARGE xylosyl- and glucuronyltransferase 2-A
EggNog:ENOG410V4H4; COG:V; MEROPS:MER0135501
LARGE xylosyl- and glucuronyltransferase 2
EggNog:ENOG41KOG3765; COG:S; SECRETED:SignalP(1-16)
LARGE xylosyl- and glucuronyltransferase 2, variant 4
LARGE xylosyl- and glucuronyltransferase 2, variant 2
LARGE xylosyl- and glucuronyltransferase 2, variant 3
EggNog:ENOG410VG0P; COG:G; CAZy:GH5_27; CAZy:GH5; CAZy:GH5_28; CAZy:GH5_29
EggNog:ENOG41KOG0819; COG:S; SECRETED:SignalP(1-27)