Schistosoma haematobium chromosome 5, whole genome shotgun sequence.
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; Schistosomatoidea; Schistosomatidae; Schistosoma.
High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing
Whole-genome sequence of Schistosoma haematobium
Chromosome-level genome assembly for S. haematobium
Submitted (18-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (04-JUN-2021) Parasite Genetics & Genomics, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Cnr Flemington Rd & Park Dr, Parkville, VIC 3010, Australia
Submitted (28-APR-2012) 2nd Office Building, Beijing Genomics Institute, Beishan Road, Yantian, Shenzhen, Guangdong 518083, P.R.China
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM039147.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: MAR-2021\nAssembly Method :: Canu v. 1.9; Medaka v. 1.0.3;\n purge_haplotigs v. 1.1.1; Platanus-allee\n v. 2.0.2; HiRise v. 2.0.5; pilon v. 1.23;\n 3D-DNA v. 180922; Juicebox Assembly Tools\n v. 1.22; TGS-GapCloser v. 1.0.3; HyPo v.\n 1.0.3\nAssembly Name :: UoM_Shae.V3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 130.0x\nSequencing Technology :: Illumina; Oxford Nanopore; PacBio; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: INSDC submitter\nAnnotation Status :: Full annotation\nAnnotation Pipeline :: Eukaryotic Annotation Propagation Pipeline\n##Genome-Annotation-Data-END##
20 whole worms (paired) and a single pair of adult worms (i.e. male and female in copula)
carbamoyl-phosphate synthase (glutamine-hydrolyzing) cpa2
EggNog:ENOG410V50S; COG:E; MEROPS:MER0011155
EggNog:ENOG410V9EN; COG:E; MEROPS:MER0026495
Serine/threonine-protein phosphatase pgam5, mitochondrial
Serine/threonine-protein phosphatase pgam5, mitochondrial, variant 2
EggNog:ENOG410V5XQ; COG:G; SECRETED:SignalP(1-23)
EggNog:ENOG41033D8; COG:G; SECRETED:SignalP(1-23)
EggNog:ENOG410V92G; COG:O; BUSCO:EOG091G07PV
CCR4-NOT transcription complex subunit 1
Acid sphingomyelinase-like phosphodiesterase 3b
Acid sphingomyelinase-like phosphodiesterase 3b, variant 2
EggNog:ENOG410WIJM; COG:I; SECRETED:SignalP(1-20)
28S ribosomal protein S33, mitochondrial
EggNog:ENOG410VJ4Z; COG:J; BUSCO:EOG091G0Y05
Feline leukemia virus subgroup C receptor- protein 2, variant 2
Feline leukemia virus subgroup C receptor- protein 2
EggNog:ENOG410WGAM; COG:W; SECRETED:SignalP(1-18)
Apoptotic chromatin condensation inducer in the nucleus
Apoptotic chromatin condensation inducer in the nucleus, variant 2
Coiled-coil domain-containing protein 58
EggNog:ENOG410V5QI; COG:T; BUSCO:EOG091G0D0W
Peptidyl-tRNA hydrolase ict1, mitochondrial
Peptidyl-tRNA hydrolase ict1, mitochondrial, variant 2
EggNog:ENOG410VFMK; COG:J; BUSCO:EOG091G0SBR
EggNog:ENOG410XG3W; COG:S; BUSCO:EOG091G0Z43
transcription initiation factor TFIID subunit 7
Dual specificity mitogen-activated protein kinase kinase 6
Glutathione S-transferase Mu 4, variant 3
Glutathione S-transferase Mu 4, variant 4
Glutathione S-transferase Mu 4, variant 2
Set1/Ash2 histone methyltransferase complex subunit ASH2
EggNog:ENOG41037HM; COG:O; BUSCO:EOG091G0TRW
Mitogen-activated protein kinase 15, variant 2
CAP-Gly domain-containing linker protein 4, variant 2
CAP-Gly domain-containing linker protein 4
EggNog:ENOG410V51X; COG:Z; BUSCO:EOG091G0F0I; SECRETED:SignalP(1-23)
CAP-Gly domain-containing linker protein 4, variant 3
EggNog:ENOG410V51X; COG:Z; BUSCO:EOG091G0M22
centromeric DNA-binding histone H3-like protein cse4
EggNog:ENOG4101MTV; SECRETED:SignalP(1-22)
EggNog:ENOG410VE3A; COG:S; SECRETED:SignalP(1-23)
Hematopoietic lineage cell-specific protein
Mediator of RNA polymerase II transcription subunit 19
EggNog:ENOG410VE15; COG:K; BUSCO:EOG091G0U4B
EggNog:ENOG410VA0E; COG:E; BUSCO:EOG091G0IDE
Tubulin polyglutamylase ttll7, variant 2
EggNog:ENOG410V54K; COG:O; MEROPS:MER0001220
EggNog:ENOG410JRGJ; SECRETED:SignalP(1-20)
Tetratricopeptide repeat protein 5, variant 2
Tyrosine--tRNA ligase, cytoplasmic, variant 2
Tyrosine--tRNA ligase, cytoplasmic, variant 3
EggNog:ENOG410VBUX; COG:J; BUSCO:EOG091G03XO
EggNog:ENOG410V5RV; COG:O; MEROPS:MER0004442; SECRETED:SignalP(1-25)
EggNog:ENOG410V5RV; COG:O; MEROPS:MER0004442
EggNog:ENOG410VEXQ; COG:H; BUSCO:EOG091G0Z4E; SECRETED:SignalP(1-17)
EggNog:ENOG410VEXQ; COG:H; BUSCO:EOG091G0Z4E
Poly [ADP-ribose] polymerase 1, variant 3
Poly [ADP-ribose] polymerase 1, variant 2
cAMP-specific 3',5'-cyclic phosphodiesterase 4D
CDC5 cell division cycle 5-like protein, variant 2
EggNog:ENOG410V4BA; COG:K; BUSCO:EOG091G0IYB
EggNog:ENOG410VC7Y; COG:C; BUSCO:EOG091G0L4M
Protein phosphatase 1, regulatory subunit
Protein phosphatase 1, regulatory subunit, variant 2
cGMP-specific 3',5'-cyclic phosphodiesterase
cGMP-specific 3',5'-cyclic phosphodiesterase, variant 2
EggNog:ENOG410V5YW; COG:L; BUSCO:EOG091G115J
cGMP-specific 3',5'-cyclic phosphodiesterase, variant 3
EggNog:ENOG410V6UT; COG:I; SECRETED:SignalP(1-22)
Metastasis suppressor protein 1, variant 3
Metastasis suppressor protein 1, variant 2
Metastasis suppressor protein 1, variant 4
Nuclear protein localization protein 4, variant 2
Membrane-bound transcription factor site-1 protease
EggNog:ENOG410VBE5; COG:O; MEROPS:MER0004988; BUSCO:EOG091G02NH; SECRETED:SignalP(1-18)
EggNog:ENOG410V83S; COG:S; SECRETED:SignalP(1-19)
V-type proton ATPase 21 kDa proteolipid subunit
V-type proton ATPase 21 kDa proteolipid subunit, variant 2
EggNog:ENOG410V7X3; COG:C; BUSCO:EOG091G0PHL
Aspartate aminotransferase, mitochondrial
Protein transport protein Sec24C, variant 2
EggNog:ENOG410VAJ1; COG:S; BUSCO:EOG091G0P5H
activating signal cointegrator 1 complex subunit, variant 2
activating signal cointegrator 1 complex subunit
EggNog:ENOG410V8FP; COG:A; BUSCO:EOG091G0GUK
EggNog:ENOG410V6TF; COG:A; BUSCO:EOG091G0MY0
pre-mRNA-splicing factor syf2, variant 2
EggNog:ENOG410VC6T; COG:O; BUSCO:EOG091G0C8H
Eukaryotic translation initiation factor 3 subunit L, variant 2
Eukaryotic translation initiation factor 3 subunit L
EggNog:ENOG410VA33; COG:J; BUSCO:EOG091G06M8
actin organization and endocytosis protein
EggNog:ENOG410V44N; COG:O; SECRETED:SignalP(1-19)
Chromodomain-helicase DNA-binding protein
EggNog:ENOG410WCCW; COG:S; BUSCO:EOG091G00AH
NADH dehydrogenase flavoprotein subunit 2
NADH dehydrogenase flavoprotein subunit 2, variant 2
NADH dehydrogenase flavoprotein subunit 2, variant 3
BTB and MATH domain-containing protein 41
Small RNA degrading nuclease 5, variant 2
Small RNA degrading nuclease 5, variant 3
EggNog:ENOG410V70Y; COG:S; BUSCO:EOG091G0AYM
28S ribosomal protein S35, mitochondrial
28S ribosomal protein S35, mitochondrial, variant 2
28S ribosomal protein S35, mitochondrial, variant 3
EggNog:ENOG410V675; COG:J; BUSCO:EOG091G0ELS
Ubiquitin carboxyl-terminal hydrolase 13
EggNog:ENOG410VAJF; COG:O; MEROPS:MER0002694
DNA polymerase epsilon subunit 3, variant 2
HEAT repeat-containing protein 2, variant 2
EggNog:ENOG410V980; COG:S; SECRETED:SignalP(1-16)
A disintegrin and metalloproteinase with thrombospondin motifs 3, variant 2
A disintegrin and metalloproteinase with thrombospondin motifs 3
EggNog:ENOG410WFWP; COG:O; MEROPS:MER0016700
EggNog:ENOG410V5TC; COG:P; SECRETED:SignalP(1-21)
N6-adenosine-methyltransferase subunit mettl3
N6-adenosine-methyltransferase subunit mettl3, variant 2
EggNog:ENOG410V5M6; COG:A; BUSCO:EOG091G0PNP
cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
cytidine monophosphate (UMP-CMP) kinase 1, cytosolic, variant 2
EggNog:ENOG41034GR; COG:L; SECRETED:SignalP(1-27)
myeloid lymphoid or mixed-lineage leukemia (trithorax, )
Histone deacetylase complex subunit sap18
EggNog:ENOG410V8B3; COG:K; BUSCO:EOG091G0SRZ
EggNog:ENOG410V8T3; COG:B,K; BUSCO:EOG091G03ZS
Soluble scavenger receptor cysteine-rich domain-containing protein ssc5d
EggNog:ENOG410V8QG; COG:S; SECRETED:SignalP(1-17)
Soluble scavenger receptor cysteine-rich domain-containing protein ssc5d, variant 2
EggNog:ENOG410VNEQ; COG:S; SECRETED:SignalP(1-17)
EggNog:ENOG410VBY9; COG:U; BUSCO:EOG091G0HAT
NADH dehydrogenase (Ubiquinone) 1 beta subcomplex, 10
EggNog:ENOG410VEC5; COG:C; BUSCO:EOG091G1BQN
Protein-L-isoaspartate(D-aspartate) O-methyltransferase
Protein-L-isoaspartate(D-aspartate) O-methyltransferase, variant 2
Neuropilin and tolloid-like protein 2, variant 2
S1 RNA-binding domain-containing protein 1
S1 RNA-binding domain-containing protein 1, variant 2
EggNog:ENOG410V8QQ; COG:S; SECRETED:SignalP(1-21)
Bis(5'-adenosyl)-triphosphatase enpp4, variant 2
Bis(5'-adenosyl)-triphosphatase enpp4, variant 3
EggNog:ENOG410V8QQ; COG:S; SECRETED:SignalP(1-23)
Protoheme IX farnesyltransferase, mitochondrial
Zinc finger Ran-binding domain-containing protein 2, variant 2
Zinc finger Ran-binding domain-containing protein 2
EggNog:ENOG410UM1C; COG:W; BUSCO:EOG091G0MZC
CDGSH iron-sulfur domain-containing protein 1
Calcium-activated potassium channel subunit alpha-1
WD repeat domain phosphoinositide-interacting protein 2
putative palmitoyltransferase zdhhc4, variant 2
Vacuolar protein-sorting-associated protein 36, variant 2
Vacuolar protein-sorting-associated protein 36
EggNog:ENOG410V6MK; COG:U; BUSCO:EOG091G09HR
Lysine-specific histone demethylase 1A, variant 2
Rap guanine nucleotide exchange factor 2
Rap guanine nucleotide exchange factor 2, variant 3
Rap guanine nucleotide exchange factor 2, variant 2
Nuclear receptor coactivator 5, variant 2
Cilia- and flagella-associated protein 91, variant 2
Cilia- and flagella-associated protein 91
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6, variant 2
EggNog:ENOG410VASZ; COG:I; BUSCO:EOG091G0H0S
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6, variant 3
Mesoderm induction early response protein 1
Mesoderm induction early response protein 1, variant 2
Phosphatidylinositide phosphatase SAC1, variant 2
EggNog:ENOG410V5H5; COG:I; BUSCO:EOG091G03I1
ATP synthase F(0) complex subunit B1, mitochondrial
ATP synthase F(0) complex subunit B1, mitochondrial, variant 2
ATP synthase F(0) complex subunit B1, mitochondrial, variant 4
ATP synthase F(0) complex subunit B1, mitochondrial, variant 3
EggNog:ENOG410VFF6; COG:S; with sequence similarity 60, member A
EggNog:ENOG410VHPE; COG:S; BUSCO:EOG091G15HV
UTP11-like, U3 small nucleolar ribonucleoprotein
UTP11-like, U3 small nucleolar ribonucleoprotein, variant 2
EggNog:ENOG410V8MZ; COG:O; BUSCO:EOG091G0H14
EggNog:ENOG410VDW0; COG:P; SECRETED:SignalP(1-21)
EggNog:ENOG410V7YC; COG:T; BUSCO:EOG091G0DVQ
Eukaryotic translation initiation factor 3 subunit D
EggNog:ENOG410V4A2; COG:J; BUSCO:EOG091G07IK
Eukaryotic translation initiation factor 3 subunit D, variant 2
Eukaryotic translation initiation factor 3 subunit D, variant 5
Eukaryotic translation initiation factor 3 subunit D, variant 3
Eukaryotic translation initiation factor 3 subunit D, variant 4
Regulator of telomere elongation helicase 1
Regulator of telomere elongation helicase 1, variant 2
26S proteasome non-ATPase regulatory subunit 13
EggNog:ENOG410VAIV; COG:O; BUSCO:EOG091G0977
Guanine nucleotide-binding protein subunit beta-2-like 1
EggNog:ENOG410MWZF; COG:T; SECRETED:SignalP(1-17)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2
EggNog:ENOG41035PU; COG:M; MEROPS:MER0012158
Trafficking protein particle complex 8, variant 3
Trafficking protein particle complex 8, variant 2
Tether containing UBX domain for GLUT4, variant 2
coiled-coil domain containing 60, variant 2
coiled-coil domain containing 60, variant 3
EggNog:ENOG410VJAN; COG:S; MEROPS:MER0018161
Transient receptor putative cation channel sub A member 1
EggNog:ENOG410YYW0; COG:O; MEROPS:MER0003620
EggNog:ENOG410YYW0; COG:O; MEROPS:MER0003620; SECRETED:SignalP(1-24)
Threonylcarbamoyladenosine tRNA methylthiotransferase
SWI SNF, matrix associated, actin dependent regulator of chromatin, sub b, member 1
EggNog:ENOG410VBU5; COG:B; BUSCO:EOG091G0AOO
Golgi apparatus membrane protein TVP23 A
SWI SNF, matrix associated, actin dependent regulator of chromatin, sub c, member 2
Dynein light chain roadblock-type 2, variant 2
EggNog:ENOG410V5N3; COG:O; SECRETED:SignalP(1-15)
EggNog:ENOG410JR4R; COG:S; SECRETED:SignalP(1-23)
E3 ubiquitin-protein ligase MARCHF3, variant 2
E3 ubiquitin-protein ligase MARCHF3, variant 4
E3 ubiquitin-protein ligase MARCHF3, variant 3
EggNog:ENOG410V879; COG:H; SECRETED:SignalP(1-22)
EggNog:ENOG410V8M1; COG:U; BUSCO:EOG091G01TH
EggNog:ENOG410V63T; COG:M,O; BUSCO:EOG091G0K98
Proteasome subunit beta type-4, variant 3
Proteasome subunit beta type-4, variant 2
EggNog:ENOG410V6TT; COG:O; MEROPS:MER0001711
Proteasome subunit alpha type-2, variant 2
EggNog:ENOG410V94E; COG:O; MEROPS:MER0000550
Serine/threonine-protein kinase haspin, variant 2
EggNog:ENOG410W0X4; SECRETED:SignalP(1-25)
Arf guanine nucleotide exchange factor syt1
Alpha-ketoglutarate-dependent dioxygenase alkB 7, mitochondrial
EggNog:ENOG410V6P4; COG:K; BUSCO:EOG091G0U2U
EggNog:ENOG410WCF5; COG:P; SECRETED:SignalP(1-22)
Carnosine N-methyltransferase, variant 2
EggNog:ENOG410VASN; COG:G; BUSCO:EOG091G0CID
EggNog:ENOG410VASN; COG:G; SECRETED:SignalP(1-27)
EggNog:ENOG410V801; COG:G; BUSCO:EOG091G0FTU