Rhinopithecus roxellana isolate Shanxi Qingling chromosome 22, ASM756505v1, whole genome shotgun sequence.
type: Entry
definition: Rhinopithecus roxellana isolate Shanxi Qingling chromosome 22, ASM756505v1, whole genome shotgun sequence.
sequence version: NC_044570.1
sequence date: 2019-09-25
sequence: sequence
division: CON
label: NC_044570.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA565017
dblink: SAMN11039125
keyword: WGS
keyword: RefSeq
source: Rhinopithecus roxellana (golden snub-nosed monkey)
organism: Rhinopithecus roxellana
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM017372.1.\nAssembly name: ASM756505v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Northwest University on\n2019/07/29. The original whole-genome shotgun project has the\naccession VMRL00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Northwest University\nAssembly Date :: 11-OCT-2018\nAssembly Method :: FALCON v. June-2016\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhinopithecus roxellana Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 15569616
topology: linear
so has quality: SO_0000987
location: 1..15569616
location: region:1-15569616:1
RO_0002162: 61622

NC_044570
type: RefSeq
SIO_000068: refseq

PRJNA565017
type: BioProject
SIO_000068: bioproject

SAMN11039125
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15569616:1
position: 15569616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15569616:1:source
so part of: sequence
organism: Rhinopithecus roxellana
mol type: genomic DNA
isolate: Shanxi Qingling
chromosome: 22
sex: male
tissue type: heart
dev stage: adult

61622
type: Taxonomy
SIO_000068: taxonomy

LOC115895632
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 13496..15115
location: region:13496-15115:1
so has part: feature:13496-15115:1:exon

115895632
type: Gene
SIO_000068: ncbigene

position:13496:1
position: 13496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15115:1
position: 15115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13496-15115:1:exon

LOC115895632
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895632
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC115895632
subclass of: SO_0000673
so part of: LOC115895632
location: 13496..15115
location: region:13496-15115:1
so has part: feature:13496-15115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13496-15115:1:exon

LOC104674097
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104674097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 85649..91507
location: region:85649-91507:1
so has part: feature:85649-91507:1:exon

104674097
type: Gene
SIO_000068: ncbigene

position:85649:1
position: 85649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91507:1
position: 91507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85649-91507:1:exon

LOC104674097
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104674097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC104674097
subclass of: SO_0000673
so part of: LOC104674097
location: 85649..85704
location: region:85649-85704:1
so has part: feature:85649-85704:1:exon

position:85704:1
position: 85704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85649-85704:1:exon

LOC104674097
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104674097
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC104674097
subclass of: SO_0000673
so part of: LOC104674097
location: 89799..91507
location: region:89799-91507:1
so has part: feature:89799-91507:1:exon

position:89799:1
position: 89799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89799-91507:1:exon

LOC115895696
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895696
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(124920..125025)
location: region:124920-125025:-1
so has part: feature:124920-125025:-1:exon
subclass of: SO_0000623

115895696
type: Gene
SIO_000068: ncbigene

position:124920:-1
position: 124920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125025:-1
position: 125025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124920-125025:-1:exon

LOC115895696
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895696
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055840.1
SIO_010081: LOC115895696
subclass of: SO_0000673
so part of: LOC115895696
location: complement(124920..125025)
location: region:124920-125025:-1
so has part: feature:124920-125025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124920-125025:-1:exon

LOC115895649
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 470627..472302
location: region:470627-472302:1
so has part: feature:470627-472302:1:exon
subclass of: SO_0000010

115895649
type: Gene
SIO_000068: ncbigene

position:470627:1
position: 470627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472302:1
position: 472302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470627-472302:1:exon

LOC115895649
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895649
product: testis-specific chromodomain protein Y 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 12 Proteins
transcript id: XM_030926300.1
SIO_010081: LOC115895649
subclass of: SO_0000673
so part of: LOC115895649
location: 470627..472302
location: region:470627-472302:1
so has part: feature:470627-472302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:470627-472302:1:exon

LOC115895649
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific chromodomain protein Y 2-like
translation: MASQEFEVETIVDKRQDKNGNTVYLVRWKGYDKQDDTWEPEHHLMNCQKCIHDFNRRQTEKQKKLEWTRTSRICSNNARRRTSRSTKADYTKSSPKMLVTGKQHGSKSSQLFAASKNIRRKAASLLTDAKDMELVNSTLKTFAPDSPVDNKKTVSGFQELKKLDPIAVDQQDLVDFKVTEGKPVRDPLSGPSAEQAGIEDKTLLQPLMSQMSGSITASMATDSAPQKAIVVLIDPLPATGKTDTRTSVARVKGGKRHVTDDGRDQSFVKKMYFTIRLTESASTYRDIVVKKEDGFTQILLSTRSTEKNALNTEVIKEIVNALNRAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNERNRASFEVVNTIKNFVNTFIQFKKPIVVSVNGPAIGLGASMLPLCDLVWATEKAWFQTPYMTFGQSPDACSTVTFPKIMGEASANEMLIAGRKLTAREACATGLVSQVFLTGTFTEEVMIQIRKLSLYNAIALEKCKTLVRCNIKMELEKANERV
SIO_010081: LOC115895649
subclass of: SO_0000673
so part of: LOC115895649
location: 470716..472257
location: region:470716-472257:1
so has part: feature:470716-472257:1:exon

XP_030782160.1
type: Protein
SIO_000068: ncbiprotein

position:470716:1
position: 470716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472257:1
position: 472257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470716-472257:1:exon

LOC104678333
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678333
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(579388..581010)
location: region:579388-581010:-1
so has part: feature:579388-581010:-1:exon

104678333
type: Gene
SIO_000068: ncbigene

position:579388:-1
position: 579388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581010:-1
position: 581010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579388-581010:-1:exon

LOC104678333
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104678333
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC104678333
subclass of: SO_0000673
so part of: LOC104678333
location: complement(579388..581010)
location: region:579388-581010:-1
so has part: feature:579388-581010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579388-581010:-1:exon

LOC115895651
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895651
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(661227..662724)
location: region:661227-662724:-1
so has part: feature:661227-662724:-1:exon

115895651
type: Gene
SIO_000068: ncbigene

position:661227:-1
position: 661227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662724:-1
position: 662724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661227-662724:-1:exon

LOC115895651
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895651
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins
pseudo: true
SIO_010081: LOC115895651
subclass of: SO_0000673
so part of: LOC115895651
location: complement(661227..662724)
location: region:661227-662724:-1
so has part: feature:661227-662724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:661227-662724:-1:exon

LOC104673358
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104673358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(741887..743594)
location: region:741887-743594:-1
so has part: feature:741887-743594:-1:exon

104673358
type: Gene
SIO_000068: ncbigene

position:741887:-1
position: 741887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743594:-1
position: 743594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741887-743594:-1:exon

LOC104673358
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104673358
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC104673358
subclass of: SO_0000673
so part of: LOC104673358
location: complement(741887..741949)
location: region:741887-741949:-1
so has part: feature:741887-741949:-1:exon

position:741949:-1
position: 741949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741887-741949:-1:exon

LOC104673358
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104673358
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC104673358
subclass of: SO_0000673
so part of: LOC104673358
location: complement(742050..742195)
location: region:742050-742195:-1
so has part: feature:742050-742195:-1:exon

position:742050:-1
position: 742050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742195:-1
position: 742195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742050-742195:-1:exon

LOC104673358
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104673358
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC104673358
subclass of: SO_0000673
so part of: LOC104673358
location: complement(742295..742415)
location: region:742295-742415:-1
so has part: feature:742295-742415:-1:exon

position:742295:-1
position: 742295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742415:-1
position: 742415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742295-742415:-1:exon

LOC104673358
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104673358
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC104673358
subclass of: SO_0000673
so part of: LOC104673358
location: complement(742540..742608)
location: region:742540-742608:-1
so has part: feature:742540-742608:-1:exon

position:742540:-1
position: 742540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742608:-1
position: 742608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:742540-742608:-1:exon

LOC104673358
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104673358
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC104673358
subclass of: SO_0000673
so part of: LOC104673358
location: complement(743195..743594)
location: region:743195-743594:-1
so has part: feature:743195-743594:-1:exon

position:743195:-1
position: 743195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743195-743594:-1:exon

LOC115895661
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895661
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1043742..1056069)
location: region:1043742-1056069:-1
so has part: feature:1043742-1056069:-1:exon

115895661
type: Gene
SIO_000068: ncbigene

position:1043742:-1
position: 1043742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056069:-1
position: 1056069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043742-1056069:-1:exon

LOC115895661
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115895661
subclass of: SO_0000673
so part of: LOC115895661
location: complement(1043742..1043824)
location: region:1043742-1043824:-1
so has part: feature:1043742-1043824:-1:exon

position:1043824:-1
position: 1043824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043742-1043824:-1:exon

LOC115895693
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895693
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1044925..1045030)
location: region:1044925-1045030:-1
so has part: feature:1044925-1045030:-1:exon
subclass of: SO_0000623

115895693
type: Gene
SIO_000068: ncbigene

position:1044925:-1
position: 1044925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045030:-1
position: 1045030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044925-1045030:-1:exon

LOC115895693
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895693
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055837.1
SIO_010081: LOC115895693
subclass of: SO_0000673
so part of: LOC115895693
location: complement(1044925..1045030)
location: region:1044925-1045030:-1
so has part: feature:1044925-1045030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1044925-1045030:-1:exon

LOC115895661
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115895661
subclass of: SO_0000673
so part of: LOC115895661
location: complement(1046274..1046409)
location: region:1046274-1046409:-1
so has part: feature:1046274-1046409:-1:exon

position:1046274:-1
position: 1046274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046409:-1
position: 1046409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046274-1046409:-1:exon

LOC115895661
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115895661
subclass of: SO_0000673
so part of: LOC115895661
location: complement(1047725..1047830)
location: region:1047725-1047830:-1
so has part: feature:1047725-1047830:-1:exon

position:1047725:-1
position: 1047725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047830:-1
position: 1047830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1047725-1047830:-1:exon

LOC115895661
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115895661
subclass of: SO_0000673
so part of: LOC115895661
location: complement(1050683..1050851)
location: region:1050683-1050851:-1
so has part: feature:1050683-1050851:-1:exon

position:1050683:-1
position: 1050683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050851:-1
position: 1050851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050683-1050851:-1:exon

LOC115895661
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115895661
subclass of: SO_0000673
so part of: LOC115895661
location: complement(1051010..1051124)
location: region:1051010-1051124:-1
so has part: feature:1051010-1051124:-1:exon

position:1051010:-1
position: 1051010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051124:-1
position: 1051124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051010-1051124:-1:exon

LOC115895661
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895661
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC115895661
subclass of: SO_0000673
so part of: LOC115895661
location: complement(1055483..1056069)
location: region:1055483-1056069:-1
so has part: feature:1055483-1056069:-1:exon

position:1055483:-1
position: 1055483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055483-1056069:-1:exon

LOC104675179
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104675179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1060117..1060480
location: region:1060117-1060480:1
so has part: feature:1060117-1060480:1:exon

104675179
type: Gene
SIO_000068: ncbigene

position:1060117:1
position: 1060117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060480:1
position: 1060480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1060117-1060480:1:exon

LOC104675179
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104675179
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC104675179
subclass of: SO_0000673
so part of: LOC104675179
location: 1060117..1060480
location: region:1060117-1060480:1
so has part: feature:1060117-1060480:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1060117-1060480:1:exon

LOC104666999
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104666999
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1270618..1295567)
location: region:1270618-1295567:-1
so has part: feature:1270618-1295567:-1:exon
subclass of: SO_0000010

104666999
type: Gene
SIO_000068: ncbigene

position:1270618:-1
position: 1270618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295567:-1
position: 1295567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1270618-1295567:-1:exon

LOC104666999
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104666999
product: nephrin-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 4 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926317.1
SIO_010081: LOC104666999
subclass of: SO_0000673
so part of: LOC104666999
location: complement(join(1270618..1270996,1275225..1275336,1275419..1275512,1275662..1275734,1275956..1276100,1280026..1280082,1283542..1283723,1283811..1283922,1285661..1285812,1286082..1286234,1286333..1286504,1287429..1287550,1288069..1288209,1288285..1288425,1289700..1289873,1289997..1290126,1290340..1290471,1291705..1291835,1291922..1292066,1292306..1292463,1292648..1292819,1292908..1293035,1293222..1293325,1294045..1294126,1294641..1294769,1294901..1295023,1295096..1295314,1295422..1295567))
location: region:1270618-1295567:-1
so has part: feature:1295422-1295567:-1:exon
so has part: feature:1295096-1295314:-1:exon
so has part: feature:1294901-1295023:-1:exon
so has part: feature:1294641-1294769:-1:exon
so has part: feature:1294045-1294126:-1:exon
so has part: feature:1293222-1293325:-1:exon
so has part: feature:1292908-1293035:-1:exon
so has part: feature:1292648-1292819:-1:exon
so has part: feature:1292306-1292463:-1:exon
so has part: feature:1291922-1292066:-1:exon
so has part: feature:1291705-1291835:-1:exon
so has part: feature:1290340-1290471:-1:exon
so has part: feature:1289997-1290126:-1:exon
so has part: feature:1289700-1289873:-1:exon
so has part: feature:1288285-1288425:-1:exon
so has part: feature:1288069-1288209:-1:exon
so has part: feature:1287429-1287550:-1:exon
so has part: feature:1286333-1286504:-1:exon
so has part: feature:1286082-1286234:-1:exon
so has part: feature:1285661-1285812:-1:exon
so has part: feature:1283811-1283922:-1:exon
so has part: feature:1283542-1283723:-1:exon
so has part: feature:1280026-1280082:-1:exon
so has part: feature:1275956-1276100:-1:exon
so has part: feature:1275662-1275734:-1:exon
so has part: feature:1275419-1275512:-1:exon
so has part: feature:1275225-1275336:-1:exon
so has part: feature:1270618-1270996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1295422-1295567:-1:exon

position:1295422:-1
position: 1295422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1295096-1295314:-1:exon

position:1295096:-1
position: 1295096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295314:-1
position: 1295314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1294901-1295023:-1:exon

position:1294901:-1
position: 1294901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295023:-1
position: 1295023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1294641-1294769:-1:exon

position:1294641:-1
position: 1294641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294769:-1
position: 1294769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1294045-1294126:-1:exon

position:1294045:-1
position: 1294045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1294126:-1
position: 1294126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1293222-1293325:-1:exon

position:1293222:-1
position: 1293222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293325:-1
position: 1293325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1292908-1293035:-1:exon

position:1292908:-1
position: 1292908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293035:-1
position: 1293035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1292648-1292819:-1:exon

position:1292648:-1
position: 1292648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292819:-1
position: 1292819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1292306-1292463:-1:exon

position:1292306:-1
position: 1292306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292463:-1
position: 1292463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1291922-1292066:-1:exon

position:1291922:-1
position: 1291922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292066:-1
position: 1292066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1291705-1291835:-1:exon

position:1291705:-1
position: 1291705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291835:-1
position: 1291835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1290340-1290471:-1:exon

position:1290340:-1
position: 1290340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290471:-1
position: 1290471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1289997-1290126:-1:exon

position:1289997:-1
position: 1289997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290126:-1
position: 1290126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1289700-1289873:-1:exon

position:1289700:-1
position: 1289700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1289873:-1
position: 1289873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1288285-1288425:-1:exon

position:1288285:-1
position: 1288285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288425:-1
position: 1288425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1288069-1288209:-1:exon

position:1288069:-1
position: 1288069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288209:-1
position: 1288209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1287429-1287550:-1:exon

position:1287429:-1
position: 1287429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1287550:-1
position: 1287550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1286333-1286504:-1:exon

position:1286333:-1
position: 1286333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286504:-1
position: 1286504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1286082-1286234:-1:exon

position:1286082:-1
position: 1286082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1286234:-1
position: 1286234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1285661-1285812:-1:exon

position:1285661:-1
position: 1285661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1285812:-1
position: 1285812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1283811-1283922:-1:exon

position:1283811:-1
position: 1283811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283922:-1
position: 1283922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1283542-1283723:-1:exon

position:1283542:-1
position: 1283542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283723:-1
position: 1283723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1280026-1280082:-1:exon

position:1280026:-1
position: 1280026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280082:-1
position: 1280082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1275956-1276100:-1:exon

position:1275956:-1
position: 1275956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276100:-1
position: 1276100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1275662-1275734:-1:exon

position:1275662:-1
position: 1275662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275734:-1
position: 1275734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1275419-1275512:-1:exon

position:1275419:-1
position: 1275419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275512:-1
position: 1275512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1275225-1275336:-1:exon

position:1275225:-1
position: 1275225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1275336:-1
position: 1275336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1270618-1270996:-1:exon

position:1270996:-1
position: 1270996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104666999
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104666999
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; deleted 4 bases in 2 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1285686..1285688),aa:OTHER)
transl except: (pos:complement(1275710..1275712),aa:OTHER)
product: LOW QUALITY PROTEIN: nephrin-like
translation: MALRTMLKAPLLLLGLLTEGLVRLAIPASIPWGFWALPENLTVVEGASVELWCGVSTPGSAVQWAKDGLLLGPDPRIPGFPRYRLEEDPARLGEFHLHIEACDLSDDAEYECQLGHSEMGPELVSPRVILSILVPPKLLHLTLEADTMVTWVAGQEYVVSCLSGDAKPAPDITILLSGQTLSNISANVNEGSQQKLFTVEATARVTHRSSDNEQLLVCEASSPALEAPIKASFTVNVLFPPGPPVFEWSGLDEGHVRAGQSLELPCVAQRGNPLATLQWLKNGQPVSTAWGTEHTQAVARSVLVMTMRPEDHGAQLSCEAHNSLSAGTQERSIMLQVTFPPSAITILGSASQVENKKVTLSCVSKSSCPWVLLRWWLGWWQLLPMEETIMDGLYGGYISMSNLTFLARQEDNGLTLTYEAFSEAFTKETFKKSLTLNIKYHAQKQWIEGAPEGQKLWAGTRVRLVCLAIGGNPEPSLTWYKVVGNVEKSGSTFSRELVLVTGPSDNQAKFTCKAGQLSASTQLSVQFPPTNVMILVNASALRLGDALNLTCISVSSNSQVSLSRDKEGERMEGLAAPPRRAPFKGSXAARSVLLQVSSRDHGQRVTCRAHSTELRETVSSFYCLNVLYRPEFLGQQVLVVTAVEQGEALLPVSVSAHPAPEAFNWTFRGYRLSPVGGPRHRILSSGALHLWNVTCADDGLYQLHCQNSESTAEALLRLDVHYAPTIRALQDPTEVNVGGSVDIVCTVDANPILPGMFSWERLGEDEEDQSLDDMEKISKGPTGRLWIHQAKLAQTGAYQCILDNGVAPPARGLVRLVVRFAPQVEHPTPXKVAAAGDSTSFATLHCRARGVPNIVFTWTKNGVPLDLQDPRYTEHTYQQGGVHSSLLTIANMSAAQDYALFTCTTTNSLGSDXTNVQLISISCPDPPSGLKVVSLTPHSVELEWKPGFDGGLPQRFCIRYEALGTPGFHYVDVLPPQATTFTLTGLQPSTRYKVWLLASNALGDSGLADKGTQLSITTPGLDQPSREPEDQLPTEPPTGPSGLALLPVLLGLRGLLLLSSASCVRGVLWQWRLRRLAEGEERPSLRGSEDPVRNXYEESQWTGEQDTRSSTVSTTEAELYYRSLRDLSPQLPPTQEEVSYSQGFTGEDEDMAFPGHLYDEVERTYPLSGAWXPLYDEVQMGPWDLRWPEDAYQDPRGIYDWVAGDLDTLEADSPPFELRGHLV
SIO_010081: LOC104666999
subclass of: SO_0000673
so part of: LOC104666999
location: complement(join(1270865..1270996,1275225..1275336,1275419..1275512,1275662..1275734,1275956..1276100,1280026..1280082,1283542..1283723,1283811..1283922,1285661..1285812,1286082..1286234,1286333..1286504,1287429..1287550,1288069..1288209,1288285..1288425,1289700..1289873,1289997..1290126,1290340..1290471,1291705..1291835,1291922..1292066,1292306..1292463,1292648..1292819,1292908..1293035,1293222..1293325,1294045..1294126,1294641..1294769,1294901..1295023,1295096..1295314,1295422..1295479))
location: region:1270865-1295479:-1
so has part: feature:1295422-1295479:-1:exon
so has part: feature:1295096-1295314:-1:exon
so has part: feature:1294901-1295023:-1:exon
so has part: feature:1294641-1294769:-1:exon
so has part: feature:1294045-1294126:-1:exon
so has part: feature:1293222-1293325:-1:exon
so has part: feature:1292908-1293035:-1:exon
so has part: feature:1292648-1292819:-1:exon
so has part: feature:1292306-1292463:-1:exon
so has part: feature:1291922-1292066:-1:exon
so has part: feature:1291705-1291835:-1:exon
so has part: feature:1290340-1290471:-1:exon
so has part: feature:1289997-1290126:-1:exon
so has part: feature:1289700-1289873:-1:exon
so has part: feature:1288285-1288425:-1:exon
so has part: feature:1288069-1288209:-1:exon
so has part: feature:1287429-1287550:-1:exon
so has part: feature:1286333-1286504:-1:exon
so has part: feature:1286082-1286234:-1:exon
so has part: feature:1285661-1285812:-1:exon
so has part: feature:1283811-1283922:-1:exon
so has part: feature:1283542-1283723:-1:exon
so has part: feature:1280026-1280082:-1:exon
so has part: feature:1275956-1276100:-1:exon
so has part: feature:1275662-1275734:-1:exon
so has part: feature:1275419-1275512:-1:exon
so has part: feature:1275225-1275336:-1:exon
so has part: feature:1270865-1270996:-1:exon

XP_030782177.1
type: Protein
SIO_000068: ncbiprotein

position:1270865:-1
position: 1270865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295479:-1
position: 1295479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295422-1295479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1295096-1295314:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1294901-1295023:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1294641-1294769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1294045-1294126:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1293222-1293325:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1292908-1293035:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1292648-1292819:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1292306-1292463:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1291922-1292066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1291705-1291835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1290340-1290471:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1289997-1290126:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1289700-1289873:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1288285-1288425:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1288069-1288209:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1287429-1287550:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1286333-1286504:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1286082-1286234:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1285661-1285812:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1283811-1283922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1283542-1283723:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1280026-1280082:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1275956-1276100:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1275662-1275734:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1275419-1275512:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1275225-1275336:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1270865-1270996:-1:exon

LOC104657873
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104657873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1410466..1410910)
location: region:1410466-1410910:-1
so has part: feature:1410466-1410910:-1:exon

104657873
type: Gene
SIO_000068: ncbigene

position:1410466:-1
position: 1410466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410910:-1
position: 1410910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1410466-1410910:-1:exon

LOC104657873
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC104657873
product: transmembrane protein 258 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 4 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_747350.2
SIO_010081: LOC104657873
so part of: LOC104657873
location: complement(1410466..1410910)
location: region:1410466-1410910:-1
so has part: feature:1410466-1410910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1410466-1410910:-1:exon

LOC115895675
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1472139..1473552)
location: region:1472139-1473552:-1
so has part: feature:1472139-1473552:-1:exon
subclass of: SO_0000010

115895675
type: Gene
SIO_000068: ncbigene

position:1472139:-1
position: 1472139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473552:-1
position: 1473552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472139-1473552:-1:exon

LOC115895675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895675
product: double homeobox protein 4C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926329.1
SIO_010081: LOC115895675
subclass of: SO_0000673
so part of: LOC115895675
location: complement(join(1472139..1472174,1473093..1473552))
location: region:1472139-1473552:-1
so has part: feature:1473093-1473552:-1:exon
so has part: feature:1472139-1472174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1473093-1473552:-1:exon

position:1473093:-1
position: 1473093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1472139-1472174:-1:exon

position:1472174:-1
position: 1472174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: double homeobox protein 4C-like
translation: MALPTPADGALPAEARGRGRRRRLVWTPSQREALRACFERNPYPGIATREELARAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGKRGPQEGRRKRTAVTRSQTALLLRAFQQDRFPGIATREELARPTGISESRIHI
SIO_010081: LOC115895675
subclass of: SO_0000673
so part of: LOC115895675
location: complement(join(1472139..1472174,1473093..1473479))
location: region:1472139-1473479:-1
so has part: feature:1473093-1473479:-1:exon
so has part: feature:1472139-1472174:-1:exon

XP_030782189.1
type: Protein
SIO_000068: ncbiprotein

position:1473479:-1
position: 1473479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1473093-1473479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1472139-1472174:-1:exon

LOC115895662
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895662
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1533229..1559559)
location: region:1533229-1559559:-1
so has part: feature:1533229-1559559:-1:exon
subclass of: SO_0000010

115895662
type: Gene
SIO_000068: ncbigene

position:1533229:-1
position: 1533229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1559559:-1
position: 1559559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533229-1559559:-1:exon

LOC115895662
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895662
product: myocardin-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926318.1
SIO_010081: LOC115895662
subclass of: SO_0000673
so part of: LOC115895662
location: complement(join(1533229..1533797,1536190..1536247,1538792..1538919,1540433..1540576,1541903..1542832,1558510..1558765,1559444..1559559))
location: region:1533229-1559559:-1
so has part: feature:1559444-1559559:-1:exon
so has part: feature:1558510-1558765:-1:exon
so has part: feature:1541903-1542832:-1:exon
so has part: feature:1540433-1540576:-1:exon
so has part: feature:1538792-1538919:-1:exon
so has part: feature:1536190-1536247:-1:exon
so has part: feature:1533229-1533797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1559444-1559559:-1:exon

position:1559444:-1
position: 1559444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1558510-1558765:-1:exon

position:1558510:-1
position: 1558510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1558765:-1
position: 1558765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1541903-1542832:-1:exon

position:1541903:-1
position: 1541903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1542832:-1
position: 1542832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1540433-1540576:-1:exon

position:1540433:-1
position: 1540433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1540576:-1
position: 1540576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1538792-1538919:-1:exon

position:1538792:-1
position: 1538792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1538919:-1
position: 1538919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1536190-1536247:-1:exon

position:1536190:-1
position: 1536190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1536247:-1
position: 1536247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1533229-1533797:-1:exon

position:1533797:-1
position: 1533797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895662
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895662
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1533238..1533240),aa:OTHER)
product: LOW QUALITY PROTEIN: myocardin-like
translation: MDWEVILMEDIQPDREASRPRRNRGYTARGRTEQRPEPSRGSAPDQKDPRLREQPTGLQSDPSSRSRGHDFWGDSPEQRNSVRAGLRLGCGAASPGLRLCFQHPGQPFATNPGIRRQSCGPRGEVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPGPNFGDITTVTFPVTPNTLPNYQTSSTSALSNGFYHFGSTSSSPPISPASSDLSVTRSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRKVEELRMQLQKQKRNNCSERKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECQPLACEAAQLQPLGNAYCVESSDQTNVLSSTFLSPQCSPQHSPLGVVKSPQHTSLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVRQKMAGLHSSDKVGPKFSIPXPTFSKASSAISEVTQPPSYEDAVKQQMTQSQQMDELPDVLIESGEMPDAREDHSCLQKVPKIPRSSQNPTAVLPKPSASFEQASSGSQIPFDPYATDSDEHLEVLVNSQSPLGKVSDVTLLKIGSEEPHFDGIMDGFSGKAAEDLFNAYEILPGPLSPMQTQFSPSSVDSSGLQLSFTESPWETIERLDLTPPSSTPGFSALSTSSPSIFNIDFLDVTDLNLSSSMDLHLXQW
SIO_010081: LOC115895662
subclass of: SO_0000673
so part of: LOC115895662
location: complement(join(1533229..1533797,1536190..1536247,1538792..1538919,1540433..1540576,1541903..1542832,1558510..1558765,1559444..1559559))
location: region:1533229-1559559:-1
so has part: feature:1559444-1559559:-1:exon
so has part: feature:1558510-1558765:-1:exon
so has part: feature:1541903-1542832:-1:exon
so has part: feature:1540433-1540576:-1:exon
so has part: feature:1538792-1538919:-1:exon
so has part: feature:1536190-1536247:-1:exon
so has part: feature:1533229-1533797:-1:exon

XP_030782178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1559444-1559559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1558510-1558765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1541903-1542832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1540433-1540576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1538792-1538919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1536190-1536247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1533229-1533797:-1:exon

LOC115895702
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895702
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1568719..1568882)
location: region:1568719-1568882:-1
so has part: feature:1568719-1568882:-1:exon
subclass of: SO_0000623

115895702
type: Gene
SIO_000068: ncbigene

position:1568719:-1
position: 1568719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568882:-1
position: 1568882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1568719-1568882:-1:exon

LOC115895702
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895702
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055844.1
SIO_010081: LOC115895702
subclass of: SO_0000673
so part of: LOC115895702
location: complement(1568719..1568882)
location: region:1568719-1568882:-1
so has part: feature:1568719-1568882:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1568719-1568882:-1:exon

LOC104659768
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104659768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1655072..1656139)
location: region:1655072-1656139:-1
so has part: feature:1655072-1656139:-1:exon

104659768
type: Gene
SIO_000068: ncbigene

position:1655072:-1
position: 1655072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1656139:-1
position: 1656139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1655072-1656139:-1:exon

LOC104659768
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104659768
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC104659768
subclass of: SO_0000673
so part of: LOC104659768
location: complement(1655072..1655758)
location: region:1655072-1655758:-1
so has part: feature:1655072-1655758:-1:exon

position:1655758:-1
position: 1655758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1655072-1655758:-1:exon

LOC104659768
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104659768
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC104659768
subclass of: SO_0000673
so part of: LOC104659768
location: complement(1656104..1656139)
location: region:1656104-1656139:-1
so has part: feature:1656104-1656139:-1:exon

position:1656104:-1
position: 1656104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1656104-1656139:-1:exon

LOC115895663
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1659426..1662387)
location: region:1659426-1662387:-1
so has part: feature:1659426-1662387:-1:exon

115895663
type: Gene
SIO_000068: ncbigene

position:1659426:-1
position: 1659426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1662387:-1
position: 1662387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1659426-1662387:-1:exon

LOC115895663
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC115895663
subclass of: SO_0000673
so part of: LOC115895663
location: complement(1659426..1659455)
location: region:1659426-1659455:-1
so has part: feature:1659426-1659455:-1:exon

position:1659455:-1
position: 1659455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1659426-1659455:-1:exon

LOC115895663
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC115895663
subclass of: SO_0000673
so part of: LOC115895663
location: complement(1659546..1659689)
location: region:1659546-1659689:-1
so has part: feature:1659546-1659689:-1:exon

position:1659546:-1
position: 1659546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659689:-1
position: 1659689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1659546-1659689:-1:exon

LOC115895663
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC115895663
subclass of: SO_0000673
so part of: LOC115895663
location: complement(1661005..1661937)
location: region:1661005-1661937:-1
so has part: feature:1661005-1661937:-1:exon

position:1661005:-1
position: 1661005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1661937:-1
position: 1661937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1661005-1661937:-1:exon

LOC115895663
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895663
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC115895663
subclass of: SO_0000673
so part of: LOC115895663
location: complement(1662313..1662387)
location: region:1662313-1662387:-1
so has part: feature:1662313-1662387:-1:exon

position:1662313:-1
position: 1662313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1662313-1662387:-1:exon

LOC115895664
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1708540..1740986)
location: region:1708540-1740986:-1
so has part: feature:1708540-1740986:-1:exon

115895664
type: Gene
SIO_000068: ncbigene

position:1708540:-1
position: 1708540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740986:-1
position: 1740986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708540-1740986:-1:exon

LOC115895664
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895664
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC115895664
subclass of: SO_0000673
so part of: LOC115895664
location: complement(1708540..1710130)
location: region:1708540-1710130:-1
so has part: feature:1708540-1710130:-1:exon

position:1710130:-1
position: 1710130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708540-1710130:-1:exon

LOC115895664
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895664
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC115895664
subclass of: SO_0000673
so part of: LOC115895664
location: complement(1714254..1714644)
location: region:1714254-1714644:-1
so has part: feature:1714254-1714644:-1:exon

position:1714254:-1
position: 1714254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714644:-1
position: 1714644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1714254-1714644:-1:exon

LOC115895664
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895664
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC115895664
subclass of: SO_0000673
so part of: LOC115895664
location: complement(1737607..1737694)
location: region:1737607-1737694:-1
so has part: feature:1737607-1737694:-1:exon

position:1737607:-1
position: 1737607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737694:-1
position: 1737694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1737607-1737694:-1:exon

LOC115895664
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895664
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC115895664
subclass of: SO_0000673
so part of: LOC115895664
location: complement(1739354..1739622)
location: region:1739354-1739622:-1
so has part: feature:1739354-1739622:-1:exon

position:1739354:-1
position: 1739354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1739622:-1
position: 1739622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1739354-1739622:-1:exon

LOC115895664
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895664
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC115895664
subclass of: SO_0000673
so part of: LOC115895664
location: complement(1740911..1740986)
location: region:1740911-1740986:-1
so has part: feature:1740911-1740986:-1:exon

position:1740911:-1
position: 1740911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1740911-1740986:-1:exon

LOC115895659
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895659
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1746367..1748397
location: region:1746367-1748397:1
so has part: feature:1746367-1748397:1:exon
subclass of: SO_0000011

115895659
type: Gene
SIO_000068: ncbigene

position:1746367:1
position: 1746367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1748397:1
position: 1748397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1746367-1748397:1:exon

LOC115895659
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC115895659
product: uncharacterized LOC115895659
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004055829.1
SIO_010081: LOC115895659
subclass of: SO_0000673
so part of: LOC115895659
location: join(1746367..1747121,1747750..1748397)
location: region:1746367-1748397:1
so has part: feature:1746367-1747121:1:exon
so has part: feature:1747750-1748397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1746367-1747121:1:exon

position:1747121:1
position: 1747121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1747750-1748397:1:exon

position:1747750:1
position: 1747750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104663153
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104663153
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1805482..1806760
location: region:1805482-1806760:1
so has part: feature:1805482-1806760:1:exon
subclass of: SO_0000010

104663153
type: Gene
SIO_000068: ncbigene

position:1805482:1
position: 1805482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1806760:1
position: 1806760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805482-1806760:1:exon

LOC104663153
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104663153
product: double homeobox protein 4C-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010364279.2
SIO_010081: LOC104663153
subclass of: SO_0000673
so part of: LOC104663153
location: 1805482..1806760
location: region:1805482-1806760:1
so has part: feature:1805482-1806760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1805482-1806760:1:exon

LOC104663153
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104663153
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: double homeobox protein 4C-like
translation: MALPTPADGALPAEARGRGRRRRLLWTPSQREALRACFERXPYPGISTREELAQAIGIPEPRVQIWFQNERSRQLRQHRRESRPWPGKRGLQEGRRKRTAVTRSQTALLLRAFQQDRFPGIATREELARETGLPESRIQISFQNRRAKYPGQGGRAAAHAGGPCNAAPGGCPPAPSPVAFTHTGPWGTGLPAPHMPCAPWTLPQGAFVSQGEGAVAPLRPSQAAQAAGFSLPPLAGGDWDFPFAALATPEGALSHPRAPPGWPPRPSQCQEDQDPQHHSLPGPCSVRQPGPAPAEPQGPAVPAPPTSQGSAWGGWGQGPQVARAAWEPQVGAAPPQGPAPPEAAGPQERMQDIRASSPPLREPGRSSALLSSLLDELLETPEFLQQARSFPESEAPTELQDVGEPALLEPLLLSEEEYRALLEEL
SIO_010081: LOC104663153
subclass of: SO_0000673
so part of: LOC104663153
location: 1805484..1806760
location: region:1805484-1806760:1
so has part: feature:1805484-1806760:1:exon

XP_010362581.2
type: Protein
SIO_000068: ncbiprotein

position:1805484:1
position: 1805484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805484-1806760:1:exon

LOC104659771
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104659771
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1882540..1885598)
location: region:1882540-1885598:-1
so has part: feature:1882540-1885598:-1:exon

104659771
type: Gene
SIO_000068: ncbigene

position:1882540:-1
position: 1882540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885598:-1
position: 1885598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882540-1885598:-1:exon

LOC104659771
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104659771
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC104659771
subclass of: SO_0000673
so part of: LOC104659771
location: complement(1882540..1883231)
location: region:1882540-1883231:-1
so has part: feature:1882540-1883231:-1:exon

position:1883231:-1
position: 1883231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882540-1883231:-1:exon

LOC104659771
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104659771
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC104659771
subclass of: SO_0000673
so part of: LOC104659771
location: complement(1885090..1885598)
location: region:1885090-1885598:-1
so has part: feature:1885090-1885598:-1:exon

position:1885090:-1
position: 1885090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1885090-1885598:-1:exon

LOC115895688
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895688
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1935052..1935215
location: region:1935052-1935215:1
so has part: feature:1935052-1935215:1:exon
subclass of: SO_0000623

115895688
type: Gene
SIO_000068: ncbigene

position:1935052:1
position: 1935052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1935215:1
position: 1935215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1935052-1935215:1:exon

LOC115895688
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895688
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055833.1
SIO_010081: LOC115895688
subclass of: SO_0000673
so part of: LOC115895688
location: 1935052..1935215
location: region:1935052-1935215:1
so has part: feature:1935052-1935215:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1935052-1935215:1:exon

LOC115895665
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1943074..1956569)
location: region:1943074-1956569:-1
so has part: feature:1943074-1956569:-1:exon

115895665
type: Gene
SIO_000068: ncbigene

position:1943074:-1
position: 1943074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956569:-1
position: 1956569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1943074-1956569:-1:exon

LOC115895665
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895665
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115895665
subclass of: SO_0000673
so part of: LOC115895665
location: complement(1943074..1943466)
location: region:1943074-1943466:-1
so has part: feature:1943074-1943466:-1:exon

position:1943466:-1
position: 1943466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1943074-1943466:-1:exon

LOC115895665
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895665
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115895665
subclass of: SO_0000673
so part of: LOC115895665
location: complement(1951372..1951591)
location: region:1951372-1951591:-1
so has part: feature:1951372-1951591:-1:exon

position:1951372:-1
position: 1951372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951591:-1
position: 1951591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1951372-1951591:-1:exon

LOC115895665
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895665
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115895665
subclass of: SO_0000673
so part of: LOC115895665
location: complement(1953357..1953451)
location: region:1953357-1953451:-1
so has part: feature:1953357-1953451:-1:exon

position:1953357:-1
position: 1953357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953451:-1
position: 1953451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1953357-1953451:-1:exon

LOC115895665
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895665
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115895665
subclass of: SO_0000673
so part of: LOC115895665
location: complement(1953870..1953974)
location: region:1953870-1953974:-1
so has part: feature:1953870-1953974:-1:exon

position:1953870:-1
position: 1953870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953974:-1
position: 1953974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1953870-1953974:-1:exon

LOC115895665
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895665
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115895665
subclass of: SO_0000673
so part of: LOC115895665
location: complement(1955535..1955542)
location: region:1955535-1955542:-1
so has part: feature:1955535-1955542:-1:exon

position:1955535:-1
position: 1955535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1955542:-1
position: 1955542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1955535-1955542:-1:exon

LOC115895665
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895665
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC115895665
subclass of: SO_0000673
so part of: LOC115895665
location: complement(1956501..1956569)
location: region:1956501-1956569:-1
so has part: feature:1956501-1956569:-1:exon

position:1956501:-1
position: 1956501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1956501-1956569:-1:exon

LOC104672139
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2016357..2029159)
location: region:2016357-2029159:-1
so has part: feature:2016357-2029159:-1:exon

104672139
type: Gene
SIO_000068: ncbigene

position:2016357:-1
position: 2016357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2029159:-1
position: 2029159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2016357-2029159:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2016357..2016492)
location: region:2016357-2016492:-1
so has part: feature:2016357-2016492:-1:exon

position:2016492:-1
position: 2016492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2016357-2016492:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2016690..2016746)
location: region:2016690-2016746:-1
so has part: feature:2016690-2016746:-1:exon

position:2016690:-1
position: 2016690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2016746:-1
position: 2016746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2016690-2016746:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2017017..2017182)
location: region:2017017-2017182:-1
so has part: feature:2017017-2017182:-1:exon

position:2017017:-1
position: 2017017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2017182:-1
position: 2017182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2017017-2017182:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2018266..2018410)
location: region:2018266-2018410:-1
so has part: feature:2018266-2018410:-1:exon

position:2018266:-1
position: 2018266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018410:-1
position: 2018410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018266-2018410:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2018626..2018858)
location: region:2018626-2018858:-1
so has part: feature:2018626-2018858:-1:exon

position:2018626:-1
position: 2018626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2018858:-1
position: 2018858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2018626-2018858:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2019206..2019412)
location: region:2019206-2019412:-1
so has part: feature:2019206-2019412:-1:exon

position:2019206:-1
position: 2019206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2019412:-1
position: 2019412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2019206-2019412:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2019992..2020156)
location: region:2019992-2020156:-1
so has part: feature:2019992-2020156:-1:exon

position:2019992:-1
position: 2019992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2020156:-1
position: 2020156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2019992-2020156:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2020904..2021015)
location: region:2020904-2021015:-1
so has part: feature:2020904-2021015:-1:exon

position:2020904:-1
position: 2020904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2021015:-1
position: 2021015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2020904-2021015:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2021452..2021668)
location: region:2021452-2021668:-1
so has part: feature:2021452-2021668:-1:exon

position:2021452:-1
position: 2021452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2021668:-1
position: 2021668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2021452-2021668:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2021776..2021840)
location: region:2021776-2021840:-1
so has part: feature:2021776-2021840:-1:exon

position:2021776:-1
position: 2021776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2021840:-1
position: 2021840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2021776-2021840:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2022090..2022224)
location: region:2022090-2022224:-1
so has part: feature:2022090-2022224:-1:exon

position:2022090:-1
position: 2022090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2022224:-1
position: 2022224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022090-2022224:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2025724..2025802)
location: region:2025724-2025802:-1
so has part: feature:2025724-2025802:-1:exon

position:2025724:-1
position: 2025724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2025802:-1
position: 2025802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2025724-2025802:-1:exon

LOC104672139
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104672139
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104672139
subclass of: SO_0000673
so part of: LOC104672139
location: complement(2029100..2029159)
location: region:2029100-2029159:-1
so has part: feature:2029100-2029159:-1:exon

position:2029100:-1
position: 2029100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2029100-2029159:-1:exon

LOC115895660
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2333831..2335453)
location: region:2333831-2335453:-1
so has part: feature:2333831-2335453:-1:exon

115895660
type: Gene
SIO_000068: ncbigene

position:2333831:-1
position: 2333831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2335453:-1
position: 2335453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2333831-2335453:-1:exon

LOC115895660
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895660
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC115895660
subclass of: SO_0000673
so part of: LOC115895660
location: complement(2333831..2335453)
location: region:2333831-2335453:-1
so has part: feature:2333831-2335453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2333831-2335453:-1:exon

LOC115895666
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2351270..2413610)
location: region:2351270-2413610:-1
so has part: feature:2351270-2413610:-1:exon
subclass of: SO_0000010

115895666
type: Gene
SIO_000068: ncbigene

position:2351270:-1
position: 2351270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2413610:-1
position: 2413610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2351270-2413610:-1:exon

LOC115895666
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895666
product: deleted in azoospermia protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_030926319.1
SIO_010081: LOC115895666
subclass of: SO_0000673
so part of: LOC115895666
location: complement(join(2351270..2351312,2352070..2352141,2353694..2353728,2356944..2357015,2358570..2358620,2359373..2359444,2361482..2361532,2363018..2363089,2364942..2364992,2365735..2365806,2367621..2367671,2368422..2368493,2370286..2370336,2371089..2371160,2372916..2372966,2373662..2373733,2383022..2383072,2383800..2383871,2385687..2385737,2386480..2386551,2387931..2388070,2388164..2388227,2388659..2388710,2389266..2389357,2389635..2389781,2395094..2395150,2403078..2403128,2403874..2403945,2405320..2405459,2405548..2405611,2406045..2406096,2406654..2406745,2407025..2407171,2413455..2413610))
location: region:2351270-2413610:-1
so has part: feature:2413455-2413610:-1:exon
so has part: feature:2407025-2407171:-1:exon
so has part: feature:2406654-2406745:-1:exon
so has part: feature:2406045-2406096:-1:exon
so has part: feature:2405548-2405611:-1:exon
so has part: feature:2405320-2405459:-1:exon
so has part: feature:2403874-2403945:-1:exon
so has part: feature:2403078-2403128:-1:exon
so has part: feature:2395094-2395150:-1:exon
so has part: feature:2389635-2389781:-1:exon
so has part: feature:2389266-2389357:-1:exon
so has part: feature:2388659-2388710:-1:exon
so has part: feature:2388164-2388227:-1:exon
so has part: feature:2387931-2388070:-1:exon
so has part: feature:2386480-2386551:-1:exon
so has part: feature:2385687-2385737:-1:exon
so has part: feature:2383800-2383871:-1:exon
so has part: feature:2383022-2383072:-1:exon
so has part: feature:2373662-2373733:-1:exon
so has part: feature:2372916-2372966:-1:exon
so has part: feature:2371089-2371160:-1:exon
so has part: feature:2370286-2370336:-1:exon
so has part: feature:2368422-2368493:-1:exon
so has part: feature:2367621-2367671:-1:exon
so has part: feature:2365735-2365806:-1:exon
so has part: feature:2364942-2364992:-1:exon
so has part: feature:2363018-2363089:-1:exon
so has part: feature:2361482-2361532:-1:exon
so has part: feature:2359373-2359444:-1:exon
so has part: feature:2358570-2358620:-1:exon
so has part: feature:2356944-2357015:-1:exon
so has part: feature:2353694-2353728:-1:exon
so has part: feature:2352070-2352141:-1:exon
so has part: feature:2351270-2351312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2413455-2413610:-1:exon

position:2413455:-1
position: 2413455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2407025-2407171:-1:exon

position:2407025:-1
position: 2407025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2407171:-1
position: 2407171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2406654-2406745:-1:exon

position:2406654:-1
position: 2406654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2406745:-1
position: 2406745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2406045-2406096:-1:exon

position:2406045:-1
position: 2406045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2406096:-1
position: 2406096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2405548-2405611:-1:exon

position:2405548:-1
position: 2405548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2405611:-1
position: 2405611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2405320-2405459:-1:exon

position:2405320:-1
position: 2405320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2405459:-1
position: 2405459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2403874-2403945:-1:exon

position:2403874:-1
position: 2403874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2403945:-1
position: 2403945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2403078-2403128:-1:exon

position:2403078:-1
position: 2403078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2403128:-1
position: 2403128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2395094-2395150:-1:exon

position:2395094:-1
position: 2395094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2395150:-1
position: 2395150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2389635-2389781:-1:exon

position:2389635:-1
position: 2389635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389781:-1
position: 2389781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2389266-2389357:-1:exon

position:2389266:-1
position: 2389266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389357:-1
position: 2389357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2388659-2388710:-1:exon

position:2388659:-1
position: 2388659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2388710:-1
position: 2388710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2388164-2388227:-1:exon

position:2388164:-1
position: 2388164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2388227:-1
position: 2388227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2387931-2388070:-1:exon

position:2387931:-1
position: 2387931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2388070:-1
position: 2388070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2386480-2386551:-1:exon

position:2386480:-1
position: 2386480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2386551:-1
position: 2386551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2385687-2385737:-1:exon

position:2385687:-1
position: 2385687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385737:-1
position: 2385737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2383800-2383871:-1:exon

position:2383800:-1
position: 2383800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383871:-1
position: 2383871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2383022-2383072:-1:exon

position:2383022:-1
position: 2383022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383072:-1
position: 2383072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2373662-2373733:-1:exon

position:2373662:-1
position: 2373662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2373733:-1
position: 2373733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2372916-2372966:-1:exon

position:2372916:-1
position: 2372916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2372966:-1
position: 2372966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2371089-2371160:-1:exon

position:2371089:-1
position: 2371089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2371160:-1
position: 2371160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2370286-2370336:-1:exon

position:2370286:-1
position: 2370286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2370336:-1
position: 2370336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2368422-2368493:-1:exon

position:2368422:-1
position: 2368422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2368493:-1
position: 2368493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2367621-2367671:-1:exon

position:2367621:-1
position: 2367621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2367671:-1
position: 2367671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2365735-2365806:-1:exon

position:2365735:-1
position: 2365735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2365806:-1
position: 2365806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2364942-2364992:-1:exon

position:2364942:-1
position: 2364942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2364992:-1
position: 2364992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2363018-2363089:-1:exon

position:2363018:-1
position: 2363018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2363089:-1
position: 2363089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2361482-2361532:-1:exon

position:2361482:-1
position: 2361482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2361532:-1
position: 2361532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2359373-2359444:-1:exon

position:2359373:-1
position: 2359373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2359444:-1
position: 2359444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2358570-2358620:-1:exon

position:2358570:-1
position: 2358570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2358620:-1
position: 2358620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2356944-2357015:-1:exon

position:2356944:-1
position: 2356944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2357015:-1
position: 2357015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2353694-2353728:-1:exon

position:2353694:-1
position: 2353694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2353728:-1
position: 2353728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2352070-2352141:-1:exon

position:2352070:-1
position: 2352070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352141:-1
position: 2352141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2351270-2351312:-1:exon

position:2351312:-1
position: 2351312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895666
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895666
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia protein 4-like
translation: MSSGPQGGKRRPGSGAAYREQQAQKWRDTEHGVIVGPGEALPHRPVARATALPAANPATPNSTISRETSTQSSSAAASQGYVVPEGRIMPNTVFVGGIDDKMAEAEIKSFFGRYGSVKEVKIITDQTGVSKGYGFVSFFNDVDVQKIVESQVHIQGKKLKLGPAIRKQNLCAYHVQPRRLVFNPPPPPQFRNVWSNPNAEMYLQPRVTPNPITQYVQPYPSYPNSPGHGIIGYQLPVYNYQMPPQWPIGEPRSYAVPLAYPTYPDSPGQVITGYHLPSATNPVTPNTIISRETNTQSSSAATSQGCVLPEGRIMPNTVFVGGIDDRMDETEIKSFFGRYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQVHIQGKKLKLGPAIRKQNLRAYHVQPRCLVFNPPPPPQFRNVWSNPNGETYRQPRVTPNPITQYVQAYPAYPNSPCQVITGYRVPVYYYQIPPQWPVGEPRSYAVPLAHPTYRNSPCQVITGYQLPVYNYQMPPQWPVGEPRSYAVPLAYPTSRNSPYQVITGYQLPVYNYQMPPQWPVGEPRSYAVPLAYPAYRNSLYQVITGYQLPVYNYQMPPQWAVREPGSYAVPLAYPAYRNSPYQVITGYQLPVYNYQMPPQWPVGEPRSYAVPLAYPPYRNSPYQVITGYHFPVYYYPMPPQWPVGEPRNYAVPLTYPTYQNSPYQVITGYQLPVYNYQMPPQWPVGEPRSYTVPLAYPIYRNSSWQVITGYQLPVYNYQIPLHWPVGEQRSYVVPLAYSTYPDSPVQVITGHQLPVYNFQMPPQWPVGGQRRRILLIQVHQVRSSLDTSCLYIITRCLHSGLLNSERGY
SIO_010081: LOC115895666
subclass of: SO_0000673
so part of: LOC115895666
location: complement(join(2351270..2351312,2352070..2352141,2353694..2353728,2356944..2357015,2358570..2358620,2359373..2359444,2361482..2361532,2363018..2363089,2364942..2364992,2365735..2365806,2367621..2367671,2368422..2368493,2370286..2370336,2371089..2371160,2372916..2372966,2373662..2373733,2383022..2383072,2383800..2383871,2385687..2385737,2386480..2386551,2387931..2388070,2388164..2388227,2388659..2388710,2389266..2389357,2389635..2389781,2395094..2395150,2403078..2403128,2403874..2403945,2405320..2405459,2405548..2405611,2406045..2406096,2406654..2406745,2407025..2407171,2413455..2413610))
location: region:2351270-2413610:-1
so has part: feature:2413455-2413610:-1:exon
so has part: feature:2407025-2407171:-1:exon
so has part: feature:2406654-2406745:-1:exon
so has part: feature:2406045-2406096:-1:exon
so has part: feature:2405548-2405611:-1:exon
so has part: feature:2405320-2405459:-1:exon
so has part: feature:2403874-2403945:-1:exon
so has part: feature:2403078-2403128:-1:exon
so has part: feature:2395094-2395150:-1:exon
so has part: feature:2389635-2389781:-1:exon
so has part: feature:2389266-2389357:-1:exon
so has part: feature:2388659-2388710:-1:exon
so has part: feature:2388164-2388227:-1:exon
so has part: feature:2387931-2388070:-1:exon
so has part: feature:2386480-2386551:-1:exon
so has part: feature:2385687-2385737:-1:exon
so has part: feature:2383800-2383871:-1:exon
so has part: feature:2383022-2383072:-1:exon
so has part: feature:2373662-2373733:-1:exon
so has part: feature:2372916-2372966:-1:exon
so has part: feature:2371089-2371160:-1:exon
so has part: feature:2370286-2370336:-1:exon
so has part: feature:2368422-2368493:-1:exon
so has part: feature:2367621-2367671:-1:exon
so has part: feature:2365735-2365806:-1:exon
so has part: feature:2364942-2364992:-1:exon
so has part: feature:2363018-2363089:-1:exon
so has part: feature:2361482-2361532:-1:exon
so has part: feature:2359373-2359444:-1:exon
so has part: feature:2358570-2358620:-1:exon
so has part: feature:2356944-2357015:-1:exon
so has part: feature:2353694-2353728:-1:exon
so has part: feature:2352070-2352141:-1:exon
so has part: feature:2351270-2351312:-1:exon

XP_030782179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2413455-2413610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2407025-2407171:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2406654-2406745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2406045-2406096:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2405548-2405611:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2405320-2405459:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2403874-2403945:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2403078-2403128:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2395094-2395150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2389635-2389781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2389266-2389357:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2388659-2388710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2388164-2388227:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2387931-2388070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2386480-2386551:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2385687-2385737:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2383800-2383871:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2383022-2383072:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2373662-2373733:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2372916-2372966:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2371089-2371160:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2370286-2370336:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2368422-2368493:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2367621-2367671:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2365735-2365806:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2364942-2364992:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2363018-2363089:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2361482-2361532:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2359373-2359444:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2358570-2358620:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2356944-2357015:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2353694-2353728:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2352070-2352141:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2351270-2351312:-1:exon

LOC104668952
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104668952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2625773..2643322
location: region:2625773-2643322:1
so has part: feature:2625773-2643322:1:exon
subclass of: SO_0000010

104668952
type: Gene
SIO_000068: ncbigene

position:2625773:1
position: 2625773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2643322:1
position: 2643322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625773-2643322:1:exon

LOC104668952
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104668952
product: eukaryotic translation initiation factor 1A, Y-chromosomal
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 122 ESTs, 32 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010371759.2
SIO_010081: LOC104668952
subclass of: SO_0000673
so part of: LOC104668952
location: join(2625773..2625952,2629557..2629640,2632499..2632602,2634290..2634340,2638112..2638193,2639610..2639701,2642518..2643322)
location: region:2625773-2643322:1
so has part: feature:2625773-2625952:1:exon
so has part: feature:2629557-2629640:1:exon
so has part: feature:2632499-2632602:1:exon
so has part: feature:2634290-2634340:1:exon
so has part: feature:2638112-2638193:1:exon
so has part: feature:2639610-2639701:1:exon
so has part: feature:2642518-2643322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2625773-2625952:1:exon

position:2625952:1
position: 2625952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2629557-2629640:1:exon

position:2629557:1
position: 2629557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2629640:1
position: 2629640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2632499-2632602:1:exon

position:2632499:1
position: 2632499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2632602:1
position: 2632602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2634290-2634340:1:exon

position:2634290:1
position: 2634290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2634340:1
position: 2634340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2638112-2638193:1:exon

position:2638112:1
position: 2638112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2638193:1
position: 2638193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2639610-2639701:1:exon

position:2639610:1
position: 2639610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2639701:1
position: 2639701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2642518-2643322:1:exon

position:2642518:1
position: 2642518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104668952
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104668952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 1A, Y-chromosomal
translation: MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDDDEDIDDI
SIO_010081: LOC104668952
subclass of: SO_0000673
so part of: LOC104668952
location: join(2625937..2625952,2629557..2629640,2632499..2632602,2634290..2634340,2638112..2638193,2639610..2639701,2642518..2642523)
location: region:2625937-2642523:1
so has part: feature:2625937-2625952:1:exon
so has part: feature:2629557-2629640:1:exon
so has part: feature:2632499-2632602:1:exon
so has part: feature:2634290-2634340:1:exon
so has part: feature:2638112-2638193:1:exon
so has part: feature:2639610-2639701:1:exon
so has part: feature:2642518-2642523:1:exon

XP_010370061.1
type: Protein
SIO_000068: ncbiprotein

position:2625937:1
position: 2625937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2642523:1
position: 2642523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625937-2625952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2629557-2629640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2632499-2632602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2634290-2634340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2638112-2638193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2639610-2639701:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2642518-2642523:1:exon

LOC104666618
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104666618
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2762362..2811737
location: region:2762362-2811737:1
so has part: feature:2762362-2811737:1:exon
subclass of: SO_0000010

104666618
type: Gene
SIO_000068: ncbigene

position:2762362:1
position: 2762362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2811737:1
position: 2811737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2762362-2811737:1:exon

LOC104666618
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104666618
product: 40S ribosomal protein S4, Y-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
transcript id: XM_030926320.1
SIO_010081: LOC104666618
subclass of: SO_0000673
so part of: LOC104666618
location: join(2762362..2762450,2766907..2766971,2770242..2770426,2797133..2797304,2810201..2810358,2811636..2811737)
location: region:2762362-2811737:1
so has part: feature:2762362-2762450:1:exon
so has part: feature:2766907-2766971:1:exon
so has part: feature:2770242-2770426:1:exon
so has part: feature:2797133-2797304:1:exon
so has part: feature:2810201-2810358:1:exon
so has part: feature:2811636-2811737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2762362-2762450:1:exon

position:2762450:1
position: 2762450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2766907-2766971:1:exon

position:2766907:1
position: 2766907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766971:1
position: 2766971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2770242-2770426:1:exon

position:2770242:1
position: 2770242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2770426:1
position: 2770426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2797133-2797304:1:exon

position:2797133:1
position: 2797133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2797304:1
position: 2797304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2810201-2810358:1:exon

position:2810201:1
position: 2810201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2810358:1
position: 2810358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2811636-2811737:1:exon

position:2811636:1
position: 2811636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104666618
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104666618
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4, Y-like
translation: MARTETGIQQYEKERTAHADDVTWPESKLRAQTIIWVAHTGETKQQFSFHSVTPGSYGFSTQLAQEDHEPHRPEFPGELLLNCNLAGHDVDPISISSQTYLGIGCSLFGVGLHYKLCKVRKITVGTKGIPHLVTHDALTICYPDPVIKLNDAVQIDLGTGKITSFIKFDTGNVCMAIGGANLGCVGVIINRERHPGSFDVVHMKDASGNSFATRISNIFVIGNGYKPWISLPRGKGIRLTIAEERDKRLAAKQSSG
SIO_010081: LOC104666618
subclass of: SO_0000673
so part of: LOC104666618
location: join(2762362..2762450,2766907..2766971,2770242..2770426,2797133..2797304,2810201..2810358,2811636..2811737)
location: region:2762362-2811737:1
so has part: feature:2762362-2762450:1:exon
so has part: feature:2766907-2766971:1:exon
so has part: feature:2770242-2770426:1:exon
so has part: feature:2797133-2797304:1:exon
so has part: feature:2810201-2810358:1:exon
so has part: feature:2811636-2811737:1:exon

XP_030782180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2762362-2762450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2766907-2766971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2770242-2770426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2797133-2797304:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2810201-2810358:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2811636-2811737:1:exon

LOC104656846
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2999342..3028255)
location: region:2999342-3028255:-1
so has part: feature:2999342-3028255:-1:exon

104656846
type: Gene
SIO_000068: ncbigene

position:2999342:-1
position: 2999342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3028255:-1
position: 3028255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2999342-3028255:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(2999342..2999431)
location: region:2999342-2999431:-1
so has part: feature:2999342-2999431:-1:exon

position:2999431:-1
position: 2999431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2999342-2999431:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(2999590..2999667)
location: region:2999590-2999667:-1
so has part: feature:2999590-2999667:-1:exon

position:2999590:-1
position: 2999590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2999667:-1
position: 2999667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2999590-2999667:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3000033..3000167)
location: region:3000033-3000167:-1
so has part: feature:3000033-3000167:-1:exon

position:3000033:-1
position: 3000033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3000167:-1
position: 3000167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3000033-3000167:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3002241..3002322)
location: region:3002241-3002322:-1
so has part: feature:3002241-3002322:-1:exon

position:3002241:-1
position: 3002241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002322:-1
position: 3002322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002241-3002322:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3002416..3002459)
location: region:3002416-3002459:-1
so has part: feature:3002416-3002459:-1:exon

position:3002416:-1
position: 3002416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002459:-1
position: 3002459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002416-3002459:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3002718..3002810)
location: region:3002718-3002810:-1
so has part: feature:3002718-3002810:-1:exon

position:3002718:-1
position: 3002718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002810:-1
position: 3002810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002718-3002810:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3003179..3003315)
location: region:3003179-3003315:-1
so has part: feature:3003179-3003315:-1:exon

position:3003179:-1
position: 3003179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003315:-1
position: 3003315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3003179-3003315:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3005067..3005271)
location: region:3005067-3005271:-1
so has part: feature:3005067-3005271:-1:exon

position:3005067:-1
position: 3005067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3005271:-1
position: 3005271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3005067-3005271:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3014307..3014429)
location: region:3014307-3014429:-1
so has part: feature:3014307-3014429:-1:exon

position:3014307:-1
position: 3014307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3014429:-1
position: 3014429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3014307-3014429:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3022982..3023049)
location: region:3022982-3023049:-1
so has part: feature:3022982-3023049:-1:exon

position:3022982:-1
position: 3022982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3023049:-1
position: 3023049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3022982-3023049:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3025960..3025997)
location: region:3025960-3025997:-1
so has part: feature:3025960-3025997:-1:exon

position:3025960:-1
position: 3025960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3025997:-1
position: 3025997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3025960-3025997:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3027073..3027122)
location: region:3027073-3027122:-1
so has part: feature:3027073-3027122:-1:exon

position:3027073:-1
position: 3027073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027122:-1
position: 3027122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3027073-3027122:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3027577..3027726)
location: region:3027577-3027726:-1
so has part: feature:3027577-3027726:-1:exon

position:3027577:-1
position: 3027577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3027726:-1
position: 3027726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3027577-3027726:-1:exon

LOC104656846
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC104656846
subclass of: SO_0000673
so part of: LOC104656846
location: complement(3028178..3028255)
location: region:3028178-3028255:-1
so has part: feature:3028178-3028255:-1:exon

position:3028178:-1
position: 3028178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3028178-3028255:-1:exon

LOC104656848
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3036056..3216063)
location: region:3036056-3216063:-1
so has part: feature:3036056-3216063:-1:exon

104656848
type: Gene
SIO_000068: ncbigene

position:3036056:-1
position: 3036056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3216063:-1
position: 3216063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036056-3216063:-1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3036056..3036143)
location: region:3036056-3036143:-1
so has part: feature:3036056-3036143:-1:exon

position:3036143:-1
position: 3036143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036056-3036143:-1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3036251..3036297)
location: region:3036251-3036297:-1
so has part: feature:3036251-3036297:-1:exon

position:3036251:-1
position: 3036251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3036297:-1
position: 3036297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036251-3036297:-1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3036596..3036635)
location: region:3036596-3036635:-1
so has part: feature:3036596-3036635:-1:exon

position:3036596:-1
position: 3036596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3036635:-1
position: 3036635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3036596-3036635:-1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3037001..3037127)
location: region:3037001-3037127:-1
so has part: feature:3037001-3037127:-1:exon

position:3037001:-1
position: 3037001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3037127:-1
position: 3037127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3037001-3037127:-1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3039310..3039423)
location: region:3039310-3039423:-1
so has part: feature:3039310-3039423:-1:exon

position:3039310:-1
position: 3039310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3039423:-1
position: 3039423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3039310-3039423:-1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3039859..3039948)
location: region:3039859-3039948:-1
so has part: feature:3039859-3039948:-1:exon

position:3039859:-1
position: 3039859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3039948:-1
position: 3039948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3039859-3039948:-1:exon

LOC104656849
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104656849
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3057973..>3059925
location: region:3057973-3059925:1
so has part: feature:3057973-3059925:1:exon
subclass of: SO_0000010

104656849
type: Gene
SIO_000068: ncbigene

position:3057973:1
position: 3057973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3059925:1
position: 3059925
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3057973-3059925:1:exon

LOC104656849
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104656849
product: uncharacterized LOC104656849
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030926269.1
SIO_010081: LOC104656849
subclass of: SO_0000673
so part of: LOC104656849
location: join(3057973..3058002,3059695..>3059925)
location: region:3057973-3059925:1
so has part: feature:3057973-3058002:1:exon
so has part: feature:3059695-3059925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3057973-3058002:1:exon

position:3058002:1
position: 3058002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3059695-3059925:1:exon

position:3059695:1
position: 3059695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104656849
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104656849
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC104656849
translation: MTYSTVAIPGTCLVTRMWNIQREXQHRPPDRSMDTGVGAMWAPHRRGKXAGGRHLGTKFSTPLVSKKTQTKTKVSVRVIIECQLDWIK
SIO_010081: LOC104656849
subclass of: SO_0000673
so part of: LOC104656849
location: join(3057973..3058002,3059695..>3059925)
location: region:3057973-3059925:1
so has part: feature:3057973-3058002:1:exon
so has part: feature:3059695-3059925:1:exon

XP_030782129.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3057973-3058002:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3059695-3059925:1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3084456..3084470)
location: region:3084456-3084470:-1
so has part: feature:3084456-3084470:-1:exon

position:3084456:-1
position: 3084456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3084470:-1
position: 3084470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3084456-3084470:-1:exon

LOC104656850
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104656850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3125492..3154474
location: region:3125492-3154474:1
so has part: feature:3125492-3154474:1:exon
subclass of: SO_0000010

104656850
type: Gene
SIO_000068: ncbigene

position:3125492:1
position: 3125492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3154474:1
position: 3154474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3125492-3154474:1:exon

LOC104656850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104656850
product: RNA-binding motif protein, X chromosome-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
transcript id: XM_030926258.1
SIO_010081: LOC104656850
subclass of: SO_0000673
so part of: LOC104656850
location: join(3125492..3125600,3126005..3126108,3127462..3127639,3139527..3139679,3141674..3141785,3142677..3142787,3142887..3142975,3143382..3143578,3153509..3153628,3154397..3154474)
location: region:3125492-3154474:1
so has part: feature:3125492-3125600:1:exon
so has part: feature:3126005-3126108:1:exon
so has part: feature:3127462-3127639:1:exon
so has part: feature:3139527-3139679:1:exon
so has part: feature:3141674-3141785:1:exon
so has part: feature:3142677-3142787:1:exon
so has part: feature:3142887-3142975:1:exon
so has part: feature:3143382-3143578:1:exon
so has part: feature:3153509-3153628:1:exon
so has part: feature:3154397-3154474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3125492-3125600:1:exon

position:3125600:1
position: 3125600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3126005-3126108:1:exon

position:3126005:1
position: 3126005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3126108:1
position: 3126108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3127462-3127639:1:exon

position:3127462:1
position: 3127462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3127639:1
position: 3127639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3139527-3139679:1:exon

position:3139527:1
position: 3139527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3139679:1
position: 3139679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3141674-3141785:1:exon

position:3141674:1
position: 3141674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141785:1
position: 3141785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3142677-3142787:1:exon

position:3142677:1
position: 3142677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142787:1
position: 3142787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3142887-3142975:1:exon

position:3142887:1
position: 3142887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142975:1
position: 3142975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3143382-3143578:1:exon

position:3143382:1
position: 3143382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143578:1
position: 3143578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3153509-3153628:1:exon

position:3153509:1
position: 3153509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3153628:1
position: 3153628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3154397-3154474:1:exon

position:3154397:1
position: 3154397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104656850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104656850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome-like
translation: MMEVNQPGKLFIGGLSREANEKTLKAVFGKHGPLSEVVWKKDRKNKCRGFAFITFENPADAKNAAKDMNGKFLYGKAIKVEQANKPSFQSGGTRRISPPSRHRSPLGSLKSIRNSSGGTRGRHHSRGRHLGDGGYTLDLHMSSSRGTFGVKRGPSSRIGSPPPKKSAPSTVARSNGGMGGQGRMSRGRESYAGPLRREPFSWRNDSTSPRDDAYATKDRNHPSFRDTRCYSPPRKDYAWCDYGRSRRDEHSSRGYGEHDGRDRDDSGHPSRCSYRDAYQSYYKSPGTSRGAAPAPAPRMTFGGSSRHDYNNTRDRYDRSRESYSRSRGDFYSSGREHSGRKERTYPPSVDRVHGHPLLTILCHTYVDPGFLGSLARPTAHRTDCGTLCHSTLATYGSEARCMRREGPVTQRLFVLL
SIO_010081: LOC104656850
subclass of: SO_0000673
so part of: LOC104656850
location: join(3125492..3125600,3126005..3126108,3127462..3127639,3139527..3139679,3141674..3141785,3142677..3142787,3142887..3142975,3143382..3143578,3153509..3153628,3154397..3154474)
location: region:3125492-3154474:1
so has part: feature:3125492-3125600:1:exon
so has part: feature:3126005-3126108:1:exon
so has part: feature:3127462-3127639:1:exon
so has part: feature:3139527-3139679:1:exon
so has part: feature:3141674-3141785:1:exon
so has part: feature:3142677-3142787:1:exon
so has part: feature:3142887-3142975:1:exon
so has part: feature:3143382-3143578:1:exon
so has part: feature:3153509-3153628:1:exon
so has part: feature:3154397-3154474:1:exon

XP_030782118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3125492-3125600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3126005-3126108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3127462-3127639:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3139527-3139679:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141674-3141785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3142677-3142787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3142887-3142975:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3143382-3143578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3153509-3153628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3154397-3154474:1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3203381..3203522)
location: region:3203381-3203522:-1
so has part: feature:3203381-3203522:-1:exon

position:3203381:-1
position: 3203381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203522:-1
position: 3203522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3203381-3203522:-1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3205131..3205296)
location: region:3205131-3205296:-1
so has part: feature:3205131-3205296:-1:exon

position:3205131:-1
position: 3205131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3205296:-1
position: 3205296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3205131-3205296:-1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3214725..3214864)
location: region:3214725-3214864:-1
so has part: feature:3214725-3214864:-1:exon

position:3214725:-1
position: 3214725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3214864:-1
position: 3214864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3214725-3214864:-1:exon

LOC104656848
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104656848
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC104656848
subclass of: SO_0000673
so part of: LOC104656848
location: complement(3215998..3216063)
location: region:3215998-3216063:-1
so has part: feature:3215998-3216063:-1:exon

position:3215998:-1
position: 3215998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3215998-3216063:-1:exon

LOC115895700
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895700
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3390321..3390450
location: region:3390321-3390450:1
so has part: feature:3390321-3390450:1:exon
subclass of: SO_0000578

115895700
type: Gene
SIO_000068: ncbigene

position:3390321:1
position: 3390321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390450:1
position: 3390450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3390321-3390450:1:exon

LOC115895700
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snoRNA
gene: LOC115895700
product: small nucleolar RNA SNORA20
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00401
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055842.1
SIO_010081: LOC115895700
subclass of: SO_0000673
so part of: LOC115895700
location: 3390321..3390450
location: region:3390321-3390450:1
so has part: feature:3390321-3390450:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3390321-3390450:1:exon

LOC104673356
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104673356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3903257..3927357)
location: region:3903257-3927357:-1
so has part: feature:3903257-3927357:-1:exon
subclass of: SO_0000010

104673356
type: Gene
SIO_000068: ncbigene

position:3903257:-1
position: 3903257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927357:-1
position: 3927357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3903257-3927357:-1:exon

LOC104673356
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104673356
product: neuroligin-4, X-linked-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 42 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926270.1
SIO_010081: LOC104673356
subclass of: SO_0000673
so part of: LOC104673356
location: complement(join(3903257..3904409,3914605..3915394,3927174..3927357))
location: region:3903257-3927357:-1
so has part: feature:3927174-3927357:-1:exon
so has part: feature:3914605-3915394:-1:exon
so has part: feature:3903257-3904409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3927174-3927357:-1:exon

position:3927174:-1
position: 3927174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3914605-3915394:-1:exon

position:3914605:-1
position: 3914605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3915394:-1
position: 3915394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3903257-3904409:-1:exon

position:3904409:-1
position: 3904409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104673356
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104673356
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-4, X-linked-like
translation: MLDTTDMVECLRNKNYKELIQQTITPATYHIAFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVDGIVDNEDGVTSNDFDFSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADKENPETRRKTLVALFTDHQWVAPAVATADLHAQYGSPTYFYAFYHHCQSEMKPSWADSAHGDEVPYVFGIPMVGPTELFSCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVPHLHNLNEIFQYVSTTTKVPPPDMTSFPYGTRRSPAKIWPTTKRPAITPANNPKHSKDPHKTGPEDTTVLIETKRDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHETHRRPSPQRNTTNDIAHIQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPDYTLTLRRSPDDIPLMTPNTITMIPNTLTGMQPLHTFNTFSRGQNSTNLPHGHSTTRV
SIO_010081: LOC104673356
subclass of: SO_0000673
so part of: LOC104673356
location: complement(join(3903560..3904409,3914605..3915284))
location: region:3903560-3915284:-1
so has part: feature:3914605-3915284:-1:exon
so has part: feature:3903560-3904409:-1:exon

XP_030782130.1
type: Protein
SIO_000068: ncbiprotein

position:3903560:-1
position: 3903560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3915284:-1
position: 3915284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3914605-3915284:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3903560-3904409:-1:exon

LOC104678181
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3967991..3994235
location: region:3967991-3994235:1
so has part: feature:3967991-3994235:1:exon

104678181
type: Gene
SIO_000068: ncbigene

position:3967991:1
position: 3967991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3994235:1
position: 3994235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3967991-3994235:1:exon

LOC104678181
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104678181
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC104678181
subclass of: SO_0000673
so part of: LOC104678181
location: 3967991..3968068
location: region:3967991-3968068:1
so has part: feature:3967991-3968068:1:exon

position:3968068:1
position: 3968068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3967991-3968068:1:exon

LOC104678181
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104678181
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC104678181
subclass of: SO_0000673
so part of: LOC104678181
location: 3969032..3969285
location: region:3969032-3969285:1
so has part: feature:3969032-3969285:1:exon

position:3969032:1
position: 3969032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3969285:1
position: 3969285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3969032-3969285:1:exon

LOC104678181
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104678181
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC104678181
subclass of: SO_0000673
so part of: LOC104678181
location: 3992528..3994235
location: region:3992528-3994235:1
so has part: feature:3992528-3994235:1:exon

position:3992528:1
position: 3992528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3992528-3994235:1:exon

LOC115895667
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4016451..4053965
location: region:4016451-4053965:1
so has part: feature:4016451-4053965:1:exon
subclass of: SO_0000010

115895667
type: Gene
SIO_000068: ncbigene

position:4016451:1
position: 4016451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4053965:1
position: 4053965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4016451-4053965:1:exon

LOC115895667
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895667
product: ankyrin repeat domain-containing protein 62-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_030926321.1
SIO_010081: LOC115895667
subclass of: SO_0000673
so part of: LOC115895667
location: join(4016451..4016464,4018744..4019075,4048024..4048237,4049839..4050022,4051170..4052097,4053774..4053965)
location: region:4016451-4053965:1
so has part: feature:4016451-4016464:1:exon
so has part: feature:4018744-4019075:1:exon
so has part: feature:4048024-4048237:1:exon
so has part: feature:4049839-4050022:1:exon
so has part: feature:4051170-4052097:1:exon
so has part: feature:4053774-4053965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4016451-4016464:1:exon

position:4016464:1
position: 4016464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4018744-4019075:1:exon

position:4018744:1
position: 4018744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4019075:1
position: 4019075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4048024-4048237:1:exon

position:4048024:1
position: 4048024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4048237:1
position: 4048237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4049839-4050022:1:exon

position:4049839:1
position: 4049839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4050022:1
position: 4050022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4051170-4052097:1:exon

position:4051170:1
position: 4051170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4052097:1
position: 4052097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4053774-4053965:1:exon

position:4053774:1
position: 4053774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115895667
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895667
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein 62-like
translation: MAEMGDFPWLPPAGARSPRTDFTNQLSEEQGLLTVPRTELPSPQDTPRRGHVFRVPRDTCGHIYEEDEAYFISGPAHEWQWLWDTWSRVHYEDEDSFSGPAKEGLLLQDTWCYIQDFVSLLKIKNAIAACERSTEHKKCNCEQLKVKFRKMKNKISMVQKELSETDETKSQLEHQNLECKQKLCNFSCILQEEEEERRKPEELYEKDTEELKIMEDQYRTQTEVKKQLQLTLELLEVELKTVRSNSNESSHTHEKERDLWQENHVMRDEIARLRLETDTIKYQNQETEKKYFKDIEIIKENNEDLEKTLKLNEEPLTKTITDYSKELHALMDGNTMVNLELEKEKQSTQRLKTEMESYPCRLAAALCDHDQCQSAKRDRQLAFQSTVNECCHLQENINSHIQILSQQLSKVESTSSGLETELHYEREALKEKTLAVEHIQGSVLSRTQCRLKNIEHMYQNDQPIFEKYVRKQQSVEDGLFQLQSRNLLYQQQCNDAHKKADNQEEIIINIRAKCEDTVEKLQAECRKLEENNKELMKECTLLKERQCQCEKEKKEGEVVMRQLQREAGDALNKQSLSEAMLEISSQRHVNLEDETRNSKKKLGQLRSQVCMKLSMSTVTL
SIO_010081: LOC115895667
subclass of: SO_0000673
so part of: LOC115895667
location: join(4016451..4016464,4018744..4019075,4048024..4048237,4049839..4050022,4051170..4052097,4053774..4053965)
location: region:4016451-4053965:1
so has part: feature:4016451-4016464:1:exon
so has part: feature:4018744-4019075:1:exon
so has part: feature:4048024-4048237:1:exon
so has part: feature:4049839-4050022:1:exon
so has part: feature:4051170-4052097:1:exon
so has part: feature:4053774-4053965:1:exon

XP_030782181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4016451-4016464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4018744-4019075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4048024-4048237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4049839-4050022:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4051170-4052097:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4053774-4053965:1:exon

LOC115895703
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895703
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4033214..4033377)
location: region:4033214-4033377:-1
so has part: feature:4033214-4033377:-1:exon
subclass of: SO_0000623

115895703
type: Gene
SIO_000068: ncbigene

position:4033214:-1
position: 4033214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4033377:-1
position: 4033377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4033214-4033377:-1:exon

LOC115895703
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895703
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055845.1
SIO_010081: LOC115895703
subclass of: SO_0000673
so part of: LOC115895703
location: complement(4033214..4033377)
location: region:4033214-4033377:-1
so has part: feature:4033214-4033377:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4033214-4033377:-1:exon

LOC115895668
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4081189..4081963)
location: region:4081189-4081963:-1
so has part: feature:4081189-4081963:-1:exon

115895668
type: Gene
SIO_000068: ncbigene

position:4081189:-1
position: 4081189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4081963:-1
position: 4081963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4081189-4081963:-1:exon

LOC115895668
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895668
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC115895668
subclass of: SO_0000673
so part of: LOC115895668
location: complement(4081189..4081963)
location: region:4081189-4081963:-1
so has part: feature:4081189-4081963:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4081189-4081963:-1:exon

LOC115895641
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4261734..4307236)
location: region:4261734-4307236:-1
so has part: feature:4261734-4307236:-1:exon
subclass of: SO_0000010

115895641
type: Gene
SIO_000068: ncbigene

position:4261734:-1
position: 4261734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4307236:-1
position: 4307236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4261734-4307236:-1:exon

LOC115895641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895641
product: deleted in azoospermia protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_030926268.1
SIO_010081: LOC115895641
subclass of: SO_0000673
so part of: LOC115895641
location: complement(join(4261734..4261760,4262535..4262606,4264937..4265008,4267417..4267488,4269840..4269911,4272812..4272883,4277113..4277184,4279686..4279757,4289871..4289942,4292562..4292633,4294012..4294151,4294244..4294307,4295127..4295178,4295734..4295825,4296105..4296251,4305495..4305634,4305723..4305786,4306220..4306271,4306827..4306918,4307198..4307236))
location: region:4261734-4307236:-1
so has part: feature:4307198-4307236:-1:exon
so has part: feature:4306827-4306918:-1:exon
so has part: feature:4306220-4306271:-1:exon
so has part: feature:4305723-4305786:-1:exon
so has part: feature:4305495-4305634:-1:exon
so has part: feature:4296105-4296251:-1:exon
so has part: feature:4295734-4295825:-1:exon
so has part: feature:4295127-4295178:-1:exon
so has part: feature:4294244-4294307:-1:exon
so has part: feature:4294012-4294151:-1:exon
so has part: feature:4292562-4292633:-1:exon
so has part: feature:4289871-4289942:-1:exon
so has part: feature:4279686-4279757:-1:exon
so has part: feature:4277113-4277184:-1:exon
so has part: feature:4272812-4272883:-1:exon
so has part: feature:4269840-4269911:-1:exon
so has part: feature:4267417-4267488:-1:exon
so has part: feature:4264937-4265008:-1:exon
so has part: feature:4262535-4262606:-1:exon
so has part: feature:4261734-4261760:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4307198-4307236:-1:exon

position:4307198:-1
position: 4307198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4306827-4306918:-1:exon

position:4306827:-1
position: 4306827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306918:-1
position: 4306918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4306220-4306271:-1:exon

position:4306220:-1
position: 4306220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4306271:-1
position: 4306271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4305723-4305786:-1:exon

position:4305723:-1
position: 4305723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4305786:-1
position: 4305786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4305495-4305634:-1:exon

position:4305495:-1
position: 4305495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4305634:-1
position: 4305634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4296105-4296251:-1:exon

position:4296105:-1
position: 4296105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4296251:-1
position: 4296251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4295734-4295825:-1:exon

position:4295734:-1
position: 4295734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4295825:-1
position: 4295825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4295127-4295178:-1:exon

position:4295127:-1
position: 4295127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4295178:-1
position: 4295178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4294244-4294307:-1:exon

position:4294244:-1
position: 4294244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4294307:-1
position: 4294307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4294012-4294151:-1:exon

position:4294012:-1
position: 4294012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4294151:-1
position: 4294151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4292562-4292633:-1:exon

position:4292562:-1
position: 4292562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4292633:-1
position: 4292633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4289871-4289942:-1:exon

position:4289871:-1
position: 4289871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4289942:-1
position: 4289942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4279686-4279757:-1:exon

position:4279686:-1
position: 4279686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4279757:-1
position: 4279757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4277113-4277184:-1:exon

position:4277113:-1
position: 4277113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4277184:-1
position: 4277184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4272812-4272883:-1:exon

position:4272812:-1
position: 4272812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4272883:-1
position: 4272883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4269840-4269911:-1:exon

position:4269840:-1
position: 4269840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4269911:-1
position: 4269911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4267417-4267488:-1:exon

position:4267417:-1
position: 4267417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4267488:-1
position: 4267488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4264937-4265008:-1:exon

position:4264937:-1
position: 4264937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4265008:-1
position: 4265008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4262535-4262606:-1:exon

position:4262535:-1
position: 4262535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4262606:-1
position: 4262606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4261734-4261760:-1:exon

position:4261760:-1
position: 4261760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia protein 4-like
translation: MPNTVFVGGIDDKMAEAEIKSFFGRYGSVKEVKIITDQTGVSKGYGFVSFFNDVDVQKIVESQVHIQGKKLKLGPAIRKQNLCAYHVQPRRLVFNPPPPPQFRNVWSNPNAEMYLQPRVTPNPITQYVQSAANPVTPNGVISRETNTQSSSAATSQGCVLPEGRIMPNTVFVGGIDDRMDETEIKSFFGRYGSVKEVKIITDRTGVSKGYGFVSFFNDVDVQKIVESQVHIQGKKLKLGPAIRKQNLRAYHVQPRCLVFNPPPPPQFRNVWSNPNAETYRQPRVTPNPITQYVQAYPAYPNSPCQVITGYRVPVYYYQAHPTYQNSPCQVITGYQLPVYNYQAYPTSRNSPYQVITGYQLPVYNYQAYPAYRNSPYQVITGYQLPVYNYQTYPTYQNSPWQVITVYQLPVYNYQAYPIYRNSSWQVITGYQLPVYNYQAYSTYPDSPVQVITGHQLPVYNFQTFPTYPYSPVQVTTGYQLPVYNYQAYPTYPSSPGQVITGYQLPVYNHQMPSQCPVE
SIO_010081: LOC115895641
subclass of: SO_0000673
so part of: LOC115895641
location: complement(join(4261734..4261760,4262535..4262606,4264937..4265008,4267417..4267488,4269840..4269911,4272812..4272883,4277113..4277184,4279686..4279757,4289871..4289942,4292562..4292633,4294012..4294151,4294244..4294307,4295127..4295178,4295734..4295825,4296105..4296251,4305495..4305634,4305723..4305786,4306220..4306271,4306827..4306918,4307198..4307236))
location: region:4261734-4307236:-1
so has part: feature:4307198-4307236:-1:exon
so has part: feature:4306827-4306918:-1:exon
so has part: feature:4306220-4306271:-1:exon
so has part: feature:4305723-4305786:-1:exon
so has part: feature:4305495-4305634:-1:exon
so has part: feature:4296105-4296251:-1:exon
so has part: feature:4295734-4295825:-1:exon
so has part: feature:4295127-4295178:-1:exon
so has part: feature:4294244-4294307:-1:exon
so has part: feature:4294012-4294151:-1:exon
so has part: feature:4292562-4292633:-1:exon
so has part: feature:4289871-4289942:-1:exon
so has part: feature:4279686-4279757:-1:exon
so has part: feature:4277113-4277184:-1:exon
so has part: feature:4272812-4272883:-1:exon
so has part: feature:4269840-4269911:-1:exon
so has part: feature:4267417-4267488:-1:exon
so has part: feature:4264937-4265008:-1:exon
so has part: feature:4262535-4262606:-1:exon
so has part: feature:4261734-4261760:-1:exon

XP_030782128.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4307198-4307236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4306827-4306918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4306220-4306271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4305723-4305786:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4305495-4305634:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4296105-4296251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4295734-4295825:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4295127-4295178:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4294244-4294307:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4294012-4294151:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4292562-4292633:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4289871-4289942:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4279686-4279757:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4277113-4277184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4272812-4272883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4269840-4269911:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4267417-4267488:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4264937-4265008:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4262535-4262606:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4261734-4261760:-1:exon

LOC115895669
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4551518..4557863
location: region:4551518-4557863:1
so has part: feature:4551518-4557863:1:exon

115895669
type: Gene
SIO_000068: ncbigene

position:4551518:1
position: 4551518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4557863:1
position: 4557863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4551518-4557863:1:exon

LOC115895669
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895669
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC115895669
subclass of: SO_0000673
so part of: LOC115895669
location: 4551518..4551554
location: region:4551518-4551554:1
so has part: feature:4551518-4551554:1:exon

position:4551554:1
position: 4551554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4551518-4551554:1:exon

LOC115895669
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895669
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC115895669
subclass of: SO_0000673
so part of: LOC115895669
location: 4551711..4551994
location: region:4551711-4551994:1
so has part: feature:4551711-4551994:1:exon

position:4551711:1
position: 4551711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4551994:1
position: 4551994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4551711-4551994:1:exon

LOC115895669
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895669
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC115895669
subclass of: SO_0000673
so part of: LOC115895669
location: 4556211..4557863
location: region:4556211-4557863:1
so has part: feature:4556211-4557863:1:exon

position:4556211:1
position: 4556211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4556211-4557863:1:exon

LOC104671834
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104671834
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4748161..4752694
location: region:4748161-4752694:1
so has part: feature:4748161-4752694:1:exon

104671834
type: Gene
SIO_000068: ncbigene

position:4748161:1
position: 4748161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4752694:1
position: 4752694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4748161-4752694:1:exon

LOC104671834
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104671834
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC104671834
subclass of: SO_0000673
so part of: LOC104671834
location: 4748161..4748228
location: region:4748161-4748228:1
so has part: feature:4748161-4748228:1:exon

position:4748228:1
position: 4748228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4748161-4748228:1:exon

LOC104671834
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104671834
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC104671834
subclass of: SO_0000673
so part of: LOC104671834
location: 4750977..4752694
location: region:4750977-4752694:1
so has part: feature:4750977-4752694:1:exon

position:4750977:1
position: 4750977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750977-4752694:1:exon

LOC104660255
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104660255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4778155..4796660
location: region:4778155-4796660:1
so has part: feature:4778155-4796660:1:exon
subclass of: SO_0000010

104660255
type: Gene
SIO_000068: ncbigene

position:4778155:1
position: 4778155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4796660:1
position: 4796660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4778155-4796660:1:exon

LOC104660255
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104660255
product: PTPN13-like protein, Y-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_030926322.1
SIO_010081: LOC104660255
subclass of: SO_0000673
so part of: LOC104660255
location: join(4778155..4778223,4779180..4779187,4780750..4780854,4789218..4789438,4796620..4796660)
location: region:4778155-4796660:1
so has part: feature:4778155-4778223:1:exon
so has part: feature:4779180-4779187:1:exon
so has part: feature:4780750-4780854:1:exon
so has part: feature:4789218-4789438:1:exon
so has part: feature:4796620-4796660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4778155-4778223:1:exon

position:4778223:1
position: 4778223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4779180-4779187:1:exon

position:4779180:1
position: 4779180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4779187:1
position: 4779187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4780750-4780854:1:exon

position:4780750:1
position: 4780750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4780854:1
position: 4780854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4789218-4789438:1:exon

position:4789218:1
position: 4789218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4789438:1
position: 4789438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4796620-4796660:1:exon

position:4796620:1
position: 4796620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104660255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104660255
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:4789282..4789284,aa:OTHER)
product: LOW QUALITY PROTEIN: PTPN13-like protein, Y-linked
translation: MGATGLGLGLSWRQDHLKVTDCQGANILFFSGIVVSMGSEISLHRVYGARRSKELKNSFLWHGKVASISLPLPESIVWINTPXISEIFHGYHQQVHGAHTLISQTSCLRSRVSSQCLGQSFLLLRTHPGEAMFSGYGEKVSGGTALV
SIO_010081: LOC104660255
subclass of: SO_0000673
so part of: LOC104660255
location: join(4778155..4778223,4779180..4779187,4780750..4780854,4789218..4789438,4796620..4796660)
location: region:4778155-4796660:1
so has part: feature:4778155-4778223:1:exon
so has part: feature:4779180-4779187:1:exon
so has part: feature:4780750-4780854:1:exon
so has part: feature:4789218-4789438:1:exon
so has part: feature:4796620-4796660:1:exon

XP_030782182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4778155-4778223:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779180-4779187:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4780750-4780854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4789218-4789438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4796620-4796660:1:exon

LOC115895670
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4823928..4833456)
location: region:4823928-4833456:-1
so has part: feature:4823928-4833456:-1:exon

115895670
type: Gene
SIO_000068: ncbigene

position:4823928:-1
position: 4823928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4833456:-1
position: 4833456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4823928-4833456:-1:exon

LOC115895670
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895670
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895670
subclass of: SO_0000673
so part of: LOC115895670
location: complement(4823928..4824527)
location: region:4823928-4824527:-1
so has part: feature:4823928-4824527:-1:exon

position:4824527:-1
position: 4824527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4823928-4824527:-1:exon

LOC104681669
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104681669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4833393..4836030)
location: region:4833393-4836030:-1
so has part: feature:4833393-4836030:-1:exon
subclass of: SO_0000010

104681669
type: Gene
SIO_000068: ncbigene

position:4833393:-1
position: 4833393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4836030:-1
position: 4836030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4833393-4836030:-1:exon

LOC104681669
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104681669
product: testis-specific Y-encoded protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins
transcript id: XM_030926324.1
SIO_010081: LOC104681669
subclass of: SO_0000673
so part of: LOC104681669
location: complement(join(4833393..4833609,4834304..4834385,4834493..4834638,4834733..4834839,4835023..4835134,4835832..4836030))
location: region:4833393-4836030:-1
so has part: feature:4835832-4836030:-1:exon
so has part: feature:4835023-4835134:-1:exon
so has part: feature:4834733-4834839:-1:exon
so has part: feature:4834493-4834638:-1:exon
so has part: feature:4834304-4834385:-1:exon
so has part: feature:4833393-4833609:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4835832-4836030:-1:exon

position:4835832:-1
position: 4835832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4835023-4835134:-1:exon

position:4835023:-1
position: 4835023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4835134:-1
position: 4835134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4834733-4834839:-1:exon

position:4834733:-1
position: 4834733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4834839:-1
position: 4834839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4834493-4834638:-1:exon

position:4834493:-1
position: 4834493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4834638:-1
position: 4834638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4834304-4834385:-1:exon

position:4834304:-1
position: 4834304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4834385:-1
position: 4834385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4833393-4833609:-1:exon

position:4833609:-1
position: 4833609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895670
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895670
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895670
subclass of: SO_0000673
so part of: LOC115895670
location: complement(4833404..4833456)
location: region:4833404-4833456:-1
so has part: feature:4833404-4833456:-1:exon

position:4833404:-1
position: 4833404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4833404-4833456:-1:exon

LOC104681669
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104681669
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 3-like
translation: MAIPCCQPSGMGSFDMALAQKPEMPYGLGLSCRPAPREGPPVSPLTAQVCWVQGQAVPAGPPSADPPCGTHFPQAIPAALAPEARKFSSGSAVFRTIHLACLIKSAKHPIHFCQIMLFFRSNLYFQNKVITKEYLVNITEYRASHSTPIQWCQDYEVEAYRRRHNSSGLNFFNWFSDHNFAGSSRIAEILYEDLWRNPLQYYRRMKPPEEGTEISGDFQIFS
SIO_010081: LOC104681669
subclass of: SO_0000673
so part of: LOC104681669
location: complement(join(4833587..4833609,4834304..4834385,4834493..4834638,4834733..4834839,4835023..4835134,4835832..4836030))
location: region:4833587-4836030:-1
so has part: feature:4835832-4836030:-1:exon
so has part: feature:4835023-4835134:-1:exon
so has part: feature:4834733-4834839:-1:exon
so has part: feature:4834493-4834638:-1:exon
so has part: feature:4834304-4834385:-1:exon
so has part: feature:4833587-4833609:-1:exon

XP_030782184.1
type: Protein
SIO_000068: ncbiprotein

position:4833587:-1
position: 4833587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4835832-4836030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4835023-4835134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4834733-4834839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4834493-4834638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4834304-4834385:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4833587-4833609:-1:exon

LOC104681668
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104681668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4947520..4959165)
location: region:4947520-4959165:-1
so has part: feature:4947520-4959165:-1:exon
subclass of: SO_0000010

104681668
type: Gene
SIO_000068: ncbigene

position:4947520:-1
position: 4947520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4959165:-1
position: 4959165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4947520-4959165:-1:exon

LOC104681668
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104681668
product: RNA-binding motif protein, Y chromosome, family 1 member F/J-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 11 ESTs, 7 Proteins
transcript id: XM_030926272.1
SIO_010081: LOC104681668
subclass of: SO_0000673
so part of: LOC104681668
location: complement(join(4947520..4948066,4948471..4948559,4948661..4948771,4949613..4949723,4950087..4950197,4951139..4951253,4953230..4953382,4955295..4955472,4958487..4958590,4959057..4959165))
location: region:4947520-4959165:-1
so has part: feature:4959057-4959165:-1:exon
so has part: feature:4958487-4958590:-1:exon
so has part: feature:4955295-4955472:-1:exon
so has part: feature:4953230-4953382:-1:exon
so has part: feature:4951139-4951253:-1:exon
so has part: feature:4950087-4950197:-1:exon
so has part: feature:4949613-4949723:-1:exon
so has part: feature:4948661-4948771:-1:exon
so has part: feature:4948471-4948559:-1:exon
so has part: feature:4947520-4948066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4959057-4959165:-1:exon

position:4959057:-1
position: 4959057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4958487-4958590:-1:exon

position:4958487:-1
position: 4958487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4958590:-1
position: 4958590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4955295-4955472:-1:exon

position:4955295:-1
position: 4955295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4955472:-1
position: 4955472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4953230-4953382:-1:exon

position:4953230:-1
position: 4953230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4953382:-1
position: 4953382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4951139-4951253:-1:exon

position:4951139:-1
position: 4951139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4951253:-1
position: 4951253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4950087-4950197:-1:exon

position:4950087:-1
position: 4950087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4950197:-1
position: 4950197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4949613-4949723:-1:exon

position:4949613:-1
position: 4949613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4949723:-1
position: 4949723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4948661-4948771:-1:exon

position:4948661:-1
position: 4948661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4948771:-1
position: 4948771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4948471-4948559:-1:exon

position:4948471:-1
position: 4948471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4948559:-1
position: 4948559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4947520-4948066:-1:exon

position:4948066:-1
position: 4948066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104681668
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104681668
product: RNA-binding motif protein, Y chromosome, family 1 member F/J-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 ESTs, 17 Proteins
transcript id: XM_030926271.1
SIO_010081: LOC104681668
subclass of: SO_0000673
so part of: LOC104681668
location: complement(join(4947520..4948066,4948471..4948559,4948661..4948771,4949137..4949247,4949613..4949723,4950087..4950197,4951139..4951253,4953230..4953382,4955295..4955472,4958487..4958590,4959057..4959165))
location: region:4947520-4959165:-1
so has part: feature:4959057-4959165:-1:exon
so has part: feature:4958487-4958590:-1:exon
so has part: feature:4955295-4955472:-1:exon
so has part: feature:4953230-4953382:-1:exon
so has part: feature:4951139-4951253:-1:exon
so has part: feature:4950087-4950197:-1:exon
so has part: feature:4949613-4949723:-1:exon
so has part: feature:4949137-4949247:-1:exon
so has part: feature:4948661-4948771:-1:exon
so has part: feature:4948471-4948559:-1:exon
so has part: feature:4947520-4948066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4959057-4959165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4958487-4958590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4955295-4955472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4953230-4953382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4951139-4951253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4950087-4950197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4949613-4949723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4949137-4949247:-1:exon

position:4949137:-1
position: 4949137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4949247:-1
position: 4949247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4948661-4948771:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4948471-4948559:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4947520-4948066:-1:exon

LOC104681668
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104681668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, Y chromosome, family 1 member F/J-like isoform X2
translation: MVEVDCPGKLYIGGLNRETNEKMLKAVFVKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQAKKPSFQSGGRRRPPPSSRNRSPSGSLRSAKGSSRGIRGWLPSHEGHLDDGGYTLDLNMSSSRGAIPVKRGPSSRSGGPLPKISALSAMARSNSWIGSQGPMSRGRENYGSPPCREPTSSWRNDHMSRRDDGYATKERTHQSSRDTRDYAPLSRVYTYRDYGRSSPDEHSSRGYRNHPSSRETRDYAPPPKDYTYPDYGRCSPDEHSSRGYRNHPSSRETRDYALPPKDYTYPAYGRSSRDENSSRGYSDPDGYSAARGRDHSEGLSGSSYRDAFQGYGTSHGAPPARGPRMSYGGSTCRDYNTRDGYGRRWESYSRSCGDSYSCGREHAGRKDQRNLPSLDRLLPAPREAYGSSSYVSSTVDGDKSRSEKGDLSRC
SIO_010081: LOC104681668
subclass of: SO_0000673
so part of: LOC104681668
location: complement(join(4947768..4948066,4948471..4948559,4948661..4948771,4949613..4949723,4950087..4950197,4951139..4951253,4953230..4953382,4955295..4955472,4958487..4958590,4959057..4959165))
location: region:4947768-4959165:-1
so has part: feature:4959057-4959165:-1:exon
so has part: feature:4958487-4958590:-1:exon
so has part: feature:4955295-4955472:-1:exon
so has part: feature:4953230-4953382:-1:exon
so has part: feature:4951139-4951253:-1:exon
so has part: feature:4950087-4950197:-1:exon
so has part: feature:4949613-4949723:-1:exon
so has part: feature:4948661-4948771:-1:exon
so has part: feature:4948471-4948559:-1:exon
so has part: feature:4947768-4948066:-1:exon

XP_030782132.1
type: Protein
SIO_000068: ncbiprotein

position:4947768:-1
position: 4947768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4959057-4959165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4958487-4958590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4955295-4955472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4953230-4953382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4951139-4951253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4950087-4950197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4949613-4949723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4948661-4948771:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4948471-4948559:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4947768-4948066:-1:exon

LOC104681668
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104681668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, Y chromosome, family 1 member F/J-like isoform X1
translation: MVEVDCPGKLYIGGLNRETNEKMLKAVFVKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQAKKPSFQSGGRRRPPPSSRNRSPSGSLRSAKGSSRGIRGWLPSHEGHLDDGGYTLDLNMSSSRGAIPVKRGPSSRSGGPLPKISALSAMARSNSWIGSQGPMSRGRENYGSPPCREPTSSWRNDHMSRRDDGYATKERTHQSSRDTRDYAPLSRVYTYRDYGRSSPDEHSSRGYRNHPSSRETRDYAPPPKDYTYPDYGRCSPDEHSSRGYRNRPSSRESRDFALPPKDYTYPDYGRCSPDEHSSRGYRNHPSSRETRDYALPPKDYTYPAYGRSSRDENSSRGYSDPDGYSAARGRDHSEGLSGSSYRDAFQGYGTSHGAPPARGPRMSYGGSTCRDYNTRDGYGRRWESYSRSCGDSYSCGREHAGRKDQRNLPSLDRLLPAPREAYGSSSYVSSTVDGDKSRSEKGDLSRC
SIO_010081: LOC104681668
subclass of: SO_0000673
so part of: LOC104681668
location: complement(join(4947768..4948066,4948471..4948559,4948661..4948771,4949137..4949247,4949613..4949723,4950087..4950197,4951139..4951253,4953230..4953382,4955295..4955472,4958487..4958590,4959057..4959165))
location: region:4947768-4959165:-1
so has part: feature:4959057-4959165:-1:exon
so has part: feature:4958487-4958590:-1:exon
so has part: feature:4955295-4955472:-1:exon
so has part: feature:4953230-4953382:-1:exon
so has part: feature:4951139-4951253:-1:exon
so has part: feature:4950087-4950197:-1:exon
so has part: feature:4949613-4949723:-1:exon
so has part: feature:4949137-4949247:-1:exon
so has part: feature:4948661-4948771:-1:exon
so has part: feature:4948471-4948559:-1:exon
so has part: feature:4947768-4948066:-1:exon

XP_030782131.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4959057-4959165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4958487-4958590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4955295-4955472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4953230-4953382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4951139-4951253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4950087-4950197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4949613-4949723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4949137-4949247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4948661-4948771:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4948471-4948559:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4947768-4948066:-1:exon

LOC104681668
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104681668
product: RNA-binding motif protein, Y chromosome, family 1 member F/J-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 ESTs, 3 Proteins
transcript id: XM_030926273.1
SIO_010081: LOC104681668
subclass of: SO_0000673
so part of: LOC104681668
location: complement(join(4947770..4948068,4948478..4948559,4948661..4948771,4949137..4949247,4949613..4949723,4950087..4950197,4951139..4951253,4953230..4953382,4955295..4955472,4958487..4958590,4959057..4959165))
location: region:4947770-4959165:-1
so has part: feature:4959057-4959165:-1:exon
so has part: feature:4958487-4958590:-1:exon
so has part: feature:4955295-4955472:-1:exon
so has part: feature:4953230-4953382:-1:exon
so has part: feature:4951139-4951253:-1:exon
so has part: feature:4950087-4950197:-1:exon
so has part: feature:4949613-4949723:-1:exon
so has part: feature:4949137-4949247:-1:exon
so has part: feature:4948661-4948771:-1:exon
so has part: feature:4948478-4948559:-1:exon
so has part: feature:4947770-4948068:-1:exon

position:4947770:-1
position: 4947770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4959057-4959165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4958487-4958590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4955295-4955472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4953230-4953382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4951139-4951253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4950087-4950197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4949613-4949723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4949137-4949247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4948661-4948771:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4948478-4948559:-1:exon

position:4948478:-1
position: 4948478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4947770-4948068:-1:exon

position:4948068:-1
position: 4948068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104681668
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104681668
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, Y chromosome, family 1 member A1-like isoform X3
translation: MVEVDCPGKLYIGGLNRETNEKMLKAVFVKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQAKKPSFQSGGRRRPPPSSRNRSPSGSLRSAKGSSRGIRGWLPSHEGHLDDGGYTLDLNMSSSRGAIPVKRGPSSRSGGPLPKISALSAMARSNSWIGSQGPMSRGRENYGSPPCREPTSSWRNDHMSRRDDGYATKERTHQSSRDTRDYAPLSRVYTYRDYGRSSPDEHSSRGYRNHPSSRETRDYAPPPKDYTYPDYGRCSPDEHSSRGYRNRPSSRESRDFALPPKDYTYPDYGRCSPDEHSSRGYRNHPSSRETRDYALPPKDYTYPAYGRSSRDENSSRGYSDPDGYSAARGRDHSEGLSGSSYRDAFQRDLSWCTTCTRASDVLWWKHLP
SIO_010081: LOC104681668
subclass of: SO_0000673
so part of: LOC104681668
location: complement(join(4948000..4948068,4948478..4948559,4948661..4948771,4949137..4949247,4949613..4949723,4950087..4950197,4951139..4951253,4953230..4953382,4955295..4955472,4958487..4958590,4959057..4959165))
location: region:4948000-4959165:-1
so has part: feature:4959057-4959165:-1:exon
so has part: feature:4958487-4958590:-1:exon
so has part: feature:4955295-4955472:-1:exon
so has part: feature:4953230-4953382:-1:exon
so has part: feature:4951139-4951253:-1:exon
so has part: feature:4950087-4950197:-1:exon
so has part: feature:4949613-4949723:-1:exon
so has part: feature:4949137-4949247:-1:exon
so has part: feature:4948661-4948771:-1:exon
so has part: feature:4948478-4948559:-1:exon
so has part: feature:4948000-4948068:-1:exon

XP_030782133.1
type: Protein
SIO_000068: ncbiprotein

position:4948000:-1
position: 4948000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4959057-4959165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4958487-4958590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4955295-4955472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4953230-4953382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4951139-4951253:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4950087-4950197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4949613-4949723:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4949137-4949247:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4948661-4948771:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4948478-4948559:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4948000-4948068:-1:exon

LOC115895671
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895671
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5083181..5083425
location: region:5083181-5083425:1
so has part: feature:5083181-5083425:1:exon

115895671
type: Gene
SIO_000068: ncbigene

position:5083181:1
position: 5083181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5083425:1
position: 5083425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5083181-5083425:1:exon

LOC115895671
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895671
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895671
subclass of: SO_0000673
so part of: LOC115895671
location: 5083181..5083425
location: region:5083181-5083425:1
so has part: feature:5083181-5083425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5083181-5083425:1:exon

LOC104655798
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104655798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5228396..5289619)
location: region:5228396-5289619:-1
so has part: feature:5228396-5289619:-1:exon
subclass of: SO_0000010

104655798
type: Gene
SIO_000068: ncbigene

position:5228396:-1
position: 5228396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5289619:-1
position: 5289619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5228396-5289619:-1:exon

LOC104655798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104655798
product: deleted in azoospermia protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926259.1
SIO_010081: LOC104655798
subclass of: SO_0000673
so part of: LOC104655798
location: complement(join(5228396..5228410,5236702..5236773,5241521..5241592,5243936..5244007,5246352..5246423,5248768..5248839,5251291..5251362,5253722..5253793,5256150..5256221,5258561..5258632,5260012..5260151,5260239..5260302,5260743..5260794,5261352..5261443,5262013..5262159,5277770..5277918,5278006..5278069,5278506..5278557,5279115..5279206,5279483..5279629,5287409..5287557,5287645..5287708,5288145..5288196,5289215..5289306,5289581..5289619))
location: region:5228396-5289619:-1
so has part: feature:5289581-5289619:-1:exon
so has part: feature:5289215-5289306:-1:exon
so has part: feature:5288145-5288196:-1:exon
so has part: feature:5287645-5287708:-1:exon
so has part: feature:5287409-5287557:-1:exon
so has part: feature:5279483-5279629:-1:exon
so has part: feature:5279115-5279206:-1:exon
so has part: feature:5278506-5278557:-1:exon
so has part: feature:5278006-5278069:-1:exon
so has part: feature:5277770-5277918:-1:exon
so has part: feature:5262013-5262159:-1:exon
so has part: feature:5261352-5261443:-1:exon
so has part: feature:5260743-5260794:-1:exon
so has part: feature:5260239-5260302:-1:exon
so has part: feature:5260012-5260151:-1:exon
so has part: feature:5258561-5258632:-1:exon
so has part: feature:5256150-5256221:-1:exon
so has part: feature:5253722-5253793:-1:exon
so has part: feature:5251291-5251362:-1:exon
so has part: feature:5248768-5248839:-1:exon
so has part: feature:5246352-5246423:-1:exon
so has part: feature:5243936-5244007:-1:exon
so has part: feature:5241521-5241592:-1:exon
so has part: feature:5236702-5236773:-1:exon
so has part: feature:5228396-5228410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5289581-5289619:-1:exon

position:5289581:-1
position: 5289581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5289215-5289306:-1:exon

position:5289215:-1
position: 5289215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5289306:-1
position: 5289306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5288145-5288196:-1:exon

position:5288145:-1
position: 5288145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5288196:-1
position: 5288196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5287645-5287708:-1:exon

position:5287645:-1
position: 5287645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5287708:-1
position: 5287708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5287409-5287557:-1:exon

position:5287409:-1
position: 5287409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5287557:-1
position: 5287557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5279483-5279629:-1:exon

position:5279483:-1
position: 5279483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5279629:-1
position: 5279629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5279115-5279206:-1:exon

position:5279115:-1
position: 5279115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5279206:-1
position: 5279206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5278506-5278557:-1:exon

position:5278506:-1
position: 5278506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5278557:-1
position: 5278557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5278006-5278069:-1:exon

position:5278006:-1
position: 5278006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5278069:-1
position: 5278069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5277770-5277918:-1:exon

position:5277770:-1
position: 5277770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5277918:-1
position: 5277918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5262013-5262159:-1:exon

position:5262013:-1
position: 5262013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5262159:-1
position: 5262159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5261352-5261443:-1:exon

position:5261352:-1
position: 5261352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5261443:-1
position: 5261443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5260743-5260794:-1:exon

position:5260743:-1
position: 5260743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5260794:-1
position: 5260794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5260239-5260302:-1:exon

position:5260239:-1
position: 5260239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5260302:-1
position: 5260302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5260012-5260151:-1:exon

position:5260012:-1
position: 5260012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5260151:-1
position: 5260151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5258561-5258632:-1:exon

position:5258561:-1
position: 5258561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5258632:-1
position: 5258632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5256150-5256221:-1:exon

position:5256150:-1
position: 5256150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5256221:-1
position: 5256221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5253722-5253793:-1:exon

position:5253722:-1
position: 5253722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5253793:-1
position: 5253793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5251291-5251362:-1:exon

position:5251291:-1
position: 5251291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5251362:-1
position: 5251362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5248768-5248839:-1:exon

position:5248768:-1
position: 5248768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5248839:-1
position: 5248839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5246352-5246423:-1:exon

position:5246352:-1
position: 5246352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5246423:-1
position: 5246423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5243936-5244007:-1:exon

position:5243936:-1
position: 5243936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5244007:-1
position: 5244007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5241521-5241592:-1:exon

position:5241521:-1
position: 5241521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5241592:-1
position: 5241592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5236702-5236773:-1:exon

position:5236702:-1
position: 5236702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5236773:-1
position: 5236773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5228396-5228410:-1:exon

position:5228410:-1
position: 5228410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104655798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104655798
product: deleted in azoospermia protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926260.1
SIO_010081: LOC104655798
subclass of: SO_0000673
so part of: LOC104655798
location: complement(join(5228396..5228410,5229239..5229307,5231928..5231999,5234279..5234350,5236702..5236773,5239106..5239177,5241521..5241592,5243936..5244007,5246352..5246423,5248768..5248839,5251291..5251362,5253722..5253793,5256150..5256221,5258561..5258632,5285405..5285476,5287409..5287557,5287645..5287708,5288145..5288196,5289215..5289306,5289581..5289619))
location: region:5228396-5289619:-1
so has part: feature:5289581-5289619:-1:exon
so has part: feature:5289215-5289306:-1:exon
so has part: feature:5288145-5288196:-1:exon
so has part: feature:5287645-5287708:-1:exon
so has part: feature:5287409-5287557:-1:exon
so has part: feature:5285405-5285476:-1:exon
so has part: feature:5258561-5258632:-1:exon
so has part: feature:5256150-5256221:-1:exon
so has part: feature:5253722-5253793:-1:exon
so has part: feature:5251291-5251362:-1:exon
so has part: feature:5248768-5248839:-1:exon
so has part: feature:5246352-5246423:-1:exon
so has part: feature:5243936-5244007:-1:exon
so has part: feature:5241521-5241592:-1:exon
so has part: feature:5239106-5239177:-1:exon
so has part: feature:5236702-5236773:-1:exon
so has part: feature:5234279-5234350:-1:exon
so has part: feature:5231928-5231999:-1:exon
so has part: feature:5229239-5229307:-1:exon
so has part: feature:5228396-5228410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5289581-5289619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5289215-5289306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5288145-5288196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5287645-5287708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5287409-5287557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5285405-5285476:-1:exon

position:5285405:-1
position: 5285405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5285476:-1
position: 5285476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5258561-5258632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5256150-5256221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5253722-5253793:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5251291-5251362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5248768-5248839:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5246352-5246423:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5243936-5244007:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5241521-5241592:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5239106-5239177:-1:exon

position:5239106:-1
position: 5239106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5239177:-1
position: 5239177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5236702-5236773:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5234279-5234350:-1:exon

position:5234279:-1
position: 5234279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5234350:-1
position: 5234350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5231928-5231999:-1:exon

position:5231928:-1
position: 5231928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5231999:-1
position: 5231999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5229239-5229307:-1:exon

position:5229239:-1
position: 5229239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5229307:-1
position: 5229307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5228396-5228410:-1:exon

LOC104655798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104655798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia protein 1-like isoform X1
translation: MPNTVFVGGINDRMDETEVQSCFGRYGSVKEVKIIMDRTGVSKGYGFVSFFNDVDVRKIVESQIHFHGKKLKLGPAIRKQKLRARHVQPRPLVFNPSPPPQFRNVCSNPNAENYLQPPITLNPVQVRTAYVPSAANPEAPNSTISREASTQSASAAASQGHVLPEGKIMPNTVFVGGIDNRMDETEIRSYFGRYGSVKKLKIITDRAGVSKGYGFVSFFNDVDVRKIVESQMHFHGKKLKLGPAIRKQKLRARHVQPRPLVFNPSPPPQFRNVCSNPNAENYLQPPITLNPVQVRTAYVPSAANPEAPNSTISREASTQSASAAASQGHVLPEGKIMPNTVFVGGIDNRMDETEIRSYFGRYGSVKEVKVIMARTGASKGYGFVSFFNDVDVQKILESQMHFHGKKLKLGPAIRKQKLCACHVQPRPLVFNPSPPPQFQNVCSNPNAENYLPPPIAVNPVTQYVQAYPTYPNSPGAVITGNQLAVYNYQALPIYPNLPVQVTTGYQLPVHNYQAFPIYPNSPVQVTTGYQLPVYNYQAFPVYPNSPVQVTTGYQLPIYNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPGQVTTGYQMPMYTYQMPPQ
SIO_010081: LOC104655798
subclass of: SO_0000673
so part of: LOC104655798
location: complement(join(5228396..5228410,5236702..5236773,5241521..5241592,5243936..5244007,5246352..5246423,5248768..5248839,5251291..5251362,5253722..5253793,5256150..5256221,5258561..5258632,5260012..5260151,5260239..5260302,5260743..5260794,5261352..5261443,5262013..5262159,5277770..5277918,5278006..5278069,5278506..5278557,5279115..5279206,5279483..5279629,5287409..5287557,5287645..5287708,5288145..5288196,5289215..5289306,5289581..5289619))
location: region:5228396-5289619:-1
so has part: feature:5289581-5289619:-1:exon
so has part: feature:5289215-5289306:-1:exon
so has part: feature:5288145-5288196:-1:exon
so has part: feature:5287645-5287708:-1:exon
so has part: feature:5287409-5287557:-1:exon
so has part: feature:5279483-5279629:-1:exon
so has part: feature:5279115-5279206:-1:exon
so has part: feature:5278506-5278557:-1:exon
so has part: feature:5278006-5278069:-1:exon
so has part: feature:5277770-5277918:-1:exon
so has part: feature:5262013-5262159:-1:exon
so has part: feature:5261352-5261443:-1:exon
so has part: feature:5260743-5260794:-1:exon
so has part: feature:5260239-5260302:-1:exon
so has part: feature:5260012-5260151:-1:exon
so has part: feature:5258561-5258632:-1:exon
so has part: feature:5256150-5256221:-1:exon
so has part: feature:5253722-5253793:-1:exon
so has part: feature:5251291-5251362:-1:exon
so has part: feature:5248768-5248839:-1:exon
so has part: feature:5246352-5246423:-1:exon
so has part: feature:5243936-5244007:-1:exon
so has part: feature:5241521-5241592:-1:exon
so has part: feature:5236702-5236773:-1:exon
so has part: feature:5228396-5228410:-1:exon

XP_030782119.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5289581-5289619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5289215-5289306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5288145-5288196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5287645-5287708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5287409-5287557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5279483-5279629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5279115-5279206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5278506-5278557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5278006-5278069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5277770-5277918:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5262013-5262159:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5261352-5261443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5260743-5260794:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5260239-5260302:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5260012-5260151:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5258561-5258632:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5256150-5256221:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5253722-5253793:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5251291-5251362:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5248768-5248839:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5246352-5246423:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5243936-5244007:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5241521-5241592:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5236702-5236773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5228396-5228410:-1:exon

LOC104655798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104655798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia protein 2-like isoform X2
translation: MPNTVFVGGINDRMDETEVQSCFGRYGSVKEVKIIMDRTGVSKGYGFVSFFNDVDVRKIVESQIHFHGKKLKLGPAIRKQKLRARHVQPRPLVFNPSPPPQFRNVCSNPNAENYLQPPITLNPVQVRTAYVPAYPIYPNSPGAVITGYQLPVYNYRAYPTYPNSPGAVITGNQLAVYNYQALPIYPNLPVQVTTGYQLPVHNYQAFPIYPNSPVQVTTGYQLPVYNYQAFPVYPNSPVQVTTGYQLPIYNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPGQVTTGYQMPMYTYQAFRVYPDSPVQVTTGSQLPVCNYQAFRVYPDSPVQVTTGYQLPVCNYLTYPTYPNSPGQVTTGYQLSVYNQMPPQ
SIO_010081: LOC104655798
subclass of: SO_0000673
so part of: LOC104655798
location: complement(join(5228396..5228410,5229239..5229307,5231928..5231999,5234279..5234350,5236702..5236773,5239106..5239177,5241521..5241592,5243936..5244007,5246352..5246423,5248768..5248839,5251291..5251362,5253722..5253793,5256150..5256221,5258561..5258632,5285405..5285476,5287409..5287557,5287645..5287708,5288145..5288196,5289215..5289306,5289581..5289619))
location: region:5228396-5289619:-1
so has part: feature:5289581-5289619:-1:exon
so has part: feature:5289215-5289306:-1:exon
so has part: feature:5288145-5288196:-1:exon
so has part: feature:5287645-5287708:-1:exon
so has part: feature:5287409-5287557:-1:exon
so has part: feature:5285405-5285476:-1:exon
so has part: feature:5258561-5258632:-1:exon
so has part: feature:5256150-5256221:-1:exon
so has part: feature:5253722-5253793:-1:exon
so has part: feature:5251291-5251362:-1:exon
so has part: feature:5248768-5248839:-1:exon
so has part: feature:5246352-5246423:-1:exon
so has part: feature:5243936-5244007:-1:exon
so has part: feature:5241521-5241592:-1:exon
so has part: feature:5239106-5239177:-1:exon
so has part: feature:5236702-5236773:-1:exon
so has part: feature:5234279-5234350:-1:exon
so has part: feature:5231928-5231999:-1:exon
so has part: feature:5229239-5229307:-1:exon
so has part: feature:5228396-5228410:-1:exon

XP_030782120.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5289581-5289619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5289215-5289306:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5288145-5288196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5287645-5287708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5287409-5287557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5285405-5285476:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5258561-5258632:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5256150-5256221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5253722-5253793:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5251291-5251362:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5248768-5248839:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5246352-5246423:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5243936-5244007:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5241521-5241592:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5239106-5239177:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5236702-5236773:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5234279-5234350:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5231928-5231999:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5229239-5229307:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5228396-5228410:-1:exon

LOC104655798
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104655798
product: deleted in azoospermia protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_030926261.1
SIO_010081: LOC104655798
subclass of: SO_0000673
so part of: LOC104655798
location: complement(join(5228396..5228410,5236702..5236773,5246352..5246423,5248768..5248839,5251291..5251362,5253722..5253793,5256150..5256221,5258561..5258632,5260012..5260151,5260239..5260302,5260743..5260794,5261352..5261443,5262013..5262051))
location: region:5228396-5262051:-1
so has part: feature:5262013-5262051:-1:exon
so has part: feature:5261352-5261443:-1:exon
so has part: feature:5260743-5260794:-1:exon
so has part: feature:5260239-5260302:-1:exon
so has part: feature:5260012-5260151:-1:exon
so has part: feature:5258561-5258632:-1:exon
so has part: feature:5256150-5256221:-1:exon
so has part: feature:5253722-5253793:-1:exon
so has part: feature:5251291-5251362:-1:exon
so has part: feature:5248768-5248839:-1:exon
so has part: feature:5246352-5246423:-1:exon
so has part: feature:5236702-5236773:-1:exon
so has part: feature:5228396-5228410:-1:exon

position:5262051:-1
position: 5262051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5262013-5262051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5261352-5261443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5260743-5260794:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5260239-5260302:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5260012-5260151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5258561-5258632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5256150-5256221:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5253722-5253793:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5251291-5251362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5248768-5248839:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5246352-5246423:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5236702-5236773:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5228396-5228410:-1:exon

LOC104655798
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104655798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deleted in azoospermia protein 3-like isoform X3
translation: MPNTVFVGGIDNRMDETEIRSYFGRYGSVKEVKVIMARTGASKGYGFVSFFNDVDVQKILESQMHFHGKKLKLGPAIRKQKLCACHVQPRPLVFNPSPPPQFQNVCSNPNAENYLPPPIAVNPVTQYVQAYPTYPNSPGAVITGNQLAVYNYQALPIYPNLPVQVTTGYQLPVHNYQAFPIYPNSPVQVTTGYQLPVYNYQAFPVYPNSPVQVTTGYQLPIYNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPVQGTTGYPMPICNYQAFPVYPNSPGQVTTGYQMPMYTYQMPPQ
SIO_010081: LOC104655798
subclass of: SO_0000673
so part of: LOC104655798
location: complement(join(5228396..5228410,5236702..5236773,5246352..5246423,5248768..5248839,5251291..5251362,5253722..5253793,5256150..5256221,5258561..5258632,5260012..5260151,5260239..5260302,5260743..5260794,5261352..5261443,5262013..5262051))
location: region:5228396-5262051:-1
so has part: feature:5262013-5262051:-1:exon
so has part: feature:5261352-5261443:-1:exon
so has part: feature:5260743-5260794:-1:exon
so has part: feature:5260239-5260302:-1:exon
so has part: feature:5260012-5260151:-1:exon
so has part: feature:5258561-5258632:-1:exon
so has part: feature:5256150-5256221:-1:exon
so has part: feature:5253722-5253793:-1:exon
so has part: feature:5251291-5251362:-1:exon
so has part: feature:5248768-5248839:-1:exon
so has part: feature:5246352-5246423:-1:exon
so has part: feature:5236702-5236773:-1:exon
so has part: feature:5228396-5228410:-1:exon

XP_030782121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5262013-5262051:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5261352-5261443:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5260743-5260794:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5260239-5260302:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5260012-5260151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5258561-5258632:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5256150-5256221:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5253722-5253793:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5251291-5251362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5248768-5248839:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5246352-5246423:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5236702-5236773:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5228396-5228410:-1:exon

LOC115895672
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895672
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5519271..5589166
location: region:5519271-5589166:1
so has part: feature:5519271-5589166:1:exon

115895672
type: Gene
SIO_000068: ncbigene

position:5519271:1
position: 5519271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5589166:1
position: 5589166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5519271-5589166:1:exon

LOC115895672
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895672
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895672
subclass of: SO_0000673
so part of: LOC115895672
location: 5519271..5519394
location: region:5519271-5519394:1
so has part: feature:5519271-5519394:1:exon

position:5519394:1
position: 5519394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5519271-5519394:1:exon

LOC115895672
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895672
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895672
subclass of: SO_0000673
so part of: LOC115895672
location: 5526822..5527001
location: region:5526822-5527001:1
so has part: feature:5526822-5527001:1:exon

position:5526822:1
position: 5526822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5527001:1
position: 5527001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5526822-5527001:1:exon

LOC115895672
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895672
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895672
subclass of: SO_0000673
so part of: LOC115895672
location: 5536270..5536276
location: region:5536270-5536276:1
so has part: feature:5536270-5536276:1:exon

position:5536270:1
position: 5536270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5536276:1
position: 5536276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5536270-5536276:1:exon

LOC115895672
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895672
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895672
subclass of: SO_0000673
so part of: LOC115895672
location: 5551377..5551496
location: region:5551377-5551496:1
so has part: feature:5551377-5551496:1:exon

position:5551377:1
position: 5551377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5551496:1
position: 5551496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5551377-5551496:1:exon

LOC115895672
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895672
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895672
subclass of: SO_0000673
so part of: LOC115895672
location: 5570072..5570438
location: region:5570072-5570438:1
so has part: feature:5570072-5570438:1:exon

position:5570072:1
position: 5570072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5570438:1
position: 5570438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5570072-5570438:1:exon

LOC115895672
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895672
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895672
subclass of: SO_0000673
so part of: LOC115895672
location: 5577972..5578175
location: region:5577972-5578175:1
so has part: feature:5577972-5578175:1:exon

position:5577972:1
position: 5577972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5578175:1
position: 5578175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5577972-5578175:1:exon

LOC115895672
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895672
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC115895672
subclass of: SO_0000673
so part of: LOC115895672
location: 5588935..5589166
location: region:5588935-5589166:1
so has part: feature:5588935-5589166:1:exon

position:5588935:1
position: 5588935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5588935-5589166:1:exon

LOC115895673
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5602928..5605379
location: region:5602928-5605379:1
so has part: feature:5602928-5605379:1:exon
subclass of: SO_0000010

115895673
type: Gene
SIO_000068: ncbigene

position:5602928:1
position: 5602928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5605379:1
position: 5605379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5602928-5605379:1:exon

LOC115895673
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895673
product: testis-specific Y-encoded protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_030926325.1
SIO_010081: LOC115895673
subclass of: SO_0000673
so part of: LOC115895673
location: join(5602928..5603053,5603829..5603941,5604125..5604231,5604327..5604472,5604580..5604661,5605357..5605379)
location: region:5602928-5605379:1
so has part: feature:5602928-5603053:1:exon
so has part: feature:5603829-5603941:1:exon
so has part: feature:5604125-5604231:1:exon
so has part: feature:5604327-5604472:1:exon
so has part: feature:5604580-5604661:1:exon
so has part: feature:5605357-5605379:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5602928-5603053:1:exon

position:5603053:1
position: 5603053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5603829-5603941:1:exon

position:5603829:1
position: 5603829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5603941:1
position: 5603941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5604125-5604231:1:exon

position:5604125:1
position: 5604125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5604231:1
position: 5604231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5604327-5604472:1:exon

position:5604327:1
position: 5604327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5604472:1
position: 5604472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5604580-5604661:1:exon

position:5604580:1
position: 5604580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5604661:1
position: 5604661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5605357-5605379:1:exon

position:5605357:1
position: 5605357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115895673
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895673
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 3-like
translation: MTIPCCQPSGMGSFKDMALAQKPEMPYDLGLSCRPAPREGPPACGTHFPQAIPAALAPEARKFSSGSAVFRTIHLACLIKSAKHPIHFCQIMLFFRSNLYFQNKVITKEYLVNITEYRASHSTPIQWCQDYEVEAYHRRHNSSGLNFFNWFSDHNFAGSSGIAEILRKDLWRNPLQYYRRMKPPEEGTEISGDFQIFS
SIO_010081: LOC115895673
subclass of: SO_0000673
so part of: LOC115895673
location: join(5602928..5603053,5603829..5603941,5604125..5604231,5604327..5604472,5604580..5604661,5605357..5605379)
location: region:5602928-5605379:1
so has part: feature:5602928-5603053:1:exon
so has part: feature:5603829-5603941:1:exon
so has part: feature:5604125-5604231:1:exon
so has part: feature:5604327-5604472:1:exon
so has part: feature:5604580-5604661:1:exon
so has part: feature:5605357-5605379:1:exon

XP_030782185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5602928-5603053:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5603829-5603941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5604125-5604231:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5604327-5604472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5604580-5604661:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5605357-5605379:1:exon

LOC104678276
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5723087..5770093)
location: region:5723087-5770093:-1
so has part: feature:5723087-5770093:-1:exon
subclass of: SO_0000010

104678276
type: Gene
SIO_000068: ncbigene

position:5723087:-1
position: 5723087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5770093:-1
position: 5770093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5723087-5770093:-1:exon

LOC104678276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678276
product: glycoprotein Xg-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926227.1
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5723087..5724386,5727552..5727668,5741194..5741244,5743806..5743868,5748854..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770093))
location: region:5723087-5770093:-1
so has part: feature:5769949-5770093:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748854-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5723087-5724386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770093:-1:exon

position:5769949:-1
position: 5769949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

position:5768410:-1
position: 5768410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5768451:-1
position: 5768451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

position:5764653:-1
position: 5764653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5764676:-1
position: 5764676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

position:5756467:-1
position: 5756467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5756529:-1
position: 5756529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5748854-5748916:-1:exon

position:5748854:-1
position: 5748854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5748916:-1
position: 5748916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

position:5743806:-1
position: 5743806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5743868:-1
position: 5743868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

position:5741194:-1
position: 5741194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5741244:-1
position: 5741244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5727552-5727668:-1:exon

position:5727552:-1
position: 5727552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5727668:-1
position: 5727668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5723087-5724386:-1:exon

position:5724386:-1
position: 5724386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104678276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678276
product: glycoprotein Xg-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926225.1
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5723087..5724386,5727552..5727668,5730779..5730814,5741194..5741244,5743806..5743868,5748854..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770093))
location: region:5723087-5770093:-1
so has part: feature:5769949-5770093:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748854-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5730779-5730814:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5723087-5724386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748854-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5730779-5730814:-1:exon

position:5730779:-1
position: 5730779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5730814:-1
position: 5730814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5723087-5724386:-1:exon

LOC104678276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678276
product: glycoprotein Xg-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926223.1
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5723087..5724386,5727552..5727668,5730779..5730814,5732227..5732271,5741194..5741244,5743806..5743868,5748854..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770093))
location: region:5723087-5770093:-1
so has part: feature:5769949-5770093:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748854-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5732227-5732271:-1:exon
so has part: feature:5730779-5730814:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5723087-5724386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748854-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5732227-5732271:-1:exon

position:5732227:-1
position: 5732227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5732271:-1
position: 5732271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5730779-5730814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5723087-5724386:-1:exon

LOC104678276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678276
product: glycoprotein Xg-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926226.1
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5723087..5724386,5727552..5727668,5741194..5741244,5743806..5743868,5748851..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770093))
location: region:5723087-5770093:-1
so has part: feature:5769949-5770093:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748851-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5723087-5724386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748851-5748916:-1:exon

position:5748851:-1
position: 5748851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5723087-5724386:-1:exon

LOC104678276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678276
product: glycoprotein Xg-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926224.1
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5723087..5724386,5727552..5727668,5730779..5730814,5741194..5741244,5743806..5743868,5748851..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770093))
location: region:5723087-5770093:-1
so has part: feature:5769949-5770093:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748851-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5730779-5730814:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5723087-5724386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748851-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5730779-5730814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5723087-5724386:-1:exon

LOC104678276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678276
product: glycoprotein Xg-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926222.1
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5723087..5724386,5727552..5727668,5730779..5730814,5732227..5732271,5741194..5741244,5743806..5743868,5748851..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770093))
location: region:5723087-5770093:-1
so has part: feature:5769949-5770093:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748851-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5732227-5732271:-1:exon
so has part: feature:5730779-5730814:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5723087-5724386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748851-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5732227-5732271:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5730779-5730814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5723087-5724386:-1:exon

LOC104678276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein Xg-like isoform X6
translation: MAVWDLTCDGTTNSQPPVWVQGQLLCVPWAQSPPPLQGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPSSGGNIYPRPKPRPQPQPGNSGNSGGYFNDVDRDDGRYPPRPRPPAGGGGGGYSSYDNSGNTDGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNGRNCFRTRETENV
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5724370..5724386,5727552..5727668,5741194..5741244,5743806..5743868,5748854..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770060))
location: region:5724370-5770060:-1
so has part: feature:5769949-5770060:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748854-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5724370-5724386:-1:exon

XP_030782087.1
type: Protein
SIO_000068: ncbiprotein

position:5724370:-1
position: 5724370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5770060:-1
position: 5770060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748854-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5724370-5724386:-1:exon

LOC104678276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein Xg-like isoform X4
translation: MAVWDLTCDGTTNSQPPVWVQGQLLCVPWAQSPPPLQGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPSSGGNIYPRPKPRPQPQPGNSGNSGGYFNDVDRDDGRYPPRPRPPAGGGGGGYSSYDNSGNTDGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNGRNCFRTRETENV
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5724370..5724386,5727552..5727668,5730779..5730814,5741194..5741244,5743806..5743868,5748854..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770060))
location: region:5724370-5770060:-1
so has part: feature:5769949-5770060:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748854-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5730779-5730814:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5724370-5724386:-1:exon

XP_030782085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748854-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5730779-5730814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5724370-5724386:-1:exon

LOC104678276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein Xg-like isoform X2
translation: MAVWDLTCDGTTNSQPPVWVQGQLLCVPWAQSPPPLQGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPSSGGNIYPRPKPRPQPQPGNSGNSGGYFNDVDRDDGRYPPRPRPPAGGGGGGYSSYDNSGNTDGRRGYRPNSRYGNTYGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNGRNCFRTRETENV
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5724370..5724386,5727552..5727668,5730779..5730814,5732227..5732271,5741194..5741244,5743806..5743868,5748854..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770060))
location: region:5724370-5770060:-1
so has part: feature:5769949-5770060:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748854-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5732227-5732271:-1:exon
so has part: feature:5730779-5730814:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5724370-5724386:-1:exon

XP_030782083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748854-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5732227-5732271:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5730779-5730814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5724370-5724386:-1:exon

LOC104678276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein Xg-like isoform X5
translation: MAVWDLTCDGTTNSQPPVWVQGQLLCVPWAQSPPPLQGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPSSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPPAGGGGGGYSSYDNSGNTDGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNGRNCFRTRETENV
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5724370..5724386,5727552..5727668,5741194..5741244,5743806..5743868,5748851..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770060))
location: region:5724370-5770060:-1
so has part: feature:5769949-5770060:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748851-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5724370-5724386:-1:exon

XP_030782086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748851-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5724370-5724386:-1:exon

LOC104678276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein Xg-like isoform X3
translation: MAVWDLTCDGTTNSQPPVWVQGQLLCVPWAQSPPPLQGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPSSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPPAGGGGGGYSSYDNSGNTDGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNGRNCFRTRETENV
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5724370..5724386,5727552..5727668,5730779..5730814,5741194..5741244,5743806..5743868,5748851..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770060))
location: region:5724370-5770060:-1
so has part: feature:5769949-5770060:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748851-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5730779-5730814:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5724370-5724386:-1:exon

XP_030782084.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748851-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5730779-5730814:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5724370-5724386:-1:exon

LOC104678276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein Xg-like isoform X1
translation: MAVWDLTCDGTTNSQPPVWVQGQLLCVPWAQSPPPLQGQRDFDLADALDDPEPTKKPNSDIYPKPKPPYYPQPENPSSGGNIYPRPKPRPQPQPGNSGNSGGSYFNDVDRDDGRYPPRPRPPAGGGGGGYSSYDNSGNTDGRRGYRPNSRYGNTYGGDHHSTYGNPEGNMVAKIVSPIVSVVVVTLLGAAASYFKLNNGRNCFRTRETENV
SIO_010081: LOC104678276
subclass of: SO_0000673
so part of: LOC104678276
location: complement(join(5724370..5724386,5727552..5727668,5730779..5730814,5732227..5732271,5741194..5741244,5743806..5743868,5748851..5748916,5756467..5756529,5764653..5764676,5768410..5768451,5769949..5770060))
location: region:5724370-5770060:-1
so has part: feature:5769949-5770060:-1:exon
so has part: feature:5768410-5768451:-1:exon
so has part: feature:5764653-5764676:-1:exon
so has part: feature:5756467-5756529:-1:exon
so has part: feature:5748851-5748916:-1:exon
so has part: feature:5743806-5743868:-1:exon
so has part: feature:5741194-5741244:-1:exon
so has part: feature:5732227-5732271:-1:exon
so has part: feature:5730779-5730814:-1:exon
so has part: feature:5727552-5727668:-1:exon
so has part: feature:5724370-5724386:-1:exon

XP_030782082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5769949-5770060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5768410-5768451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5764653-5764676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5756467-5756529:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5748851-5748916:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5743806-5743868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5741194-5741244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5732227-5732271:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5730779-5730814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5727552-5727668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5724370-5724386:-1:exon

CRLF2
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: CRLF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5871624..5895421)
location: region:5871624-5895421:-1
so has part: feature:5871624-5895421:-1:exon
subclass of: SO_0000010

104663343
type: Gene
SIO_000068: ncbigene

position:5871624:-1
position: 5871624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5895421:-1
position: 5895421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5871624-5895421:-1:exon

CRLF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CRLF2
product: cytokine receptor like factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010364478.2
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(5871624..5872205,5873808..5873892,5876197..5876317,5877952..5878114,5882005..5882138,5886062..5886228,5890450..5890552,5895227..5895421))
location: region:5871624-5895421:-1
so has part: feature:5895227-5895421:-1:exon
so has part: feature:5890450-5890552:-1:exon
so has part: feature:5886062-5886228:-1:exon
so has part: feature:5882005-5882138:-1:exon
so has part: feature:5877952-5878114:-1:exon
so has part: feature:5876197-5876317:-1:exon
so has part: feature:5873808-5873892:-1:exon
so has part: feature:5871624-5872205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5895227-5895421:-1:exon

position:5895227:-1
position: 5895227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5890450-5890552:-1:exon

position:5890450:-1
position: 5890450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5890552:-1
position: 5890552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5886062-5886228:-1:exon

position:5886062:-1
position: 5886062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5886228:-1
position: 5886228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5882005-5882138:-1:exon

position:5882005:-1
position: 5882005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5882138:-1
position: 5882138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5877952-5878114:-1:exon

position:5877952:-1
position: 5877952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5878114:-1
position: 5878114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5876197-5876317:-1:exon

position:5876197:-1
position: 5876197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5876317:-1
position: 5876317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5873808-5873892:-1:exon

position:5873808:-1
position: 5873808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5873892:-1
position: 5873892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5871624-5872205:-1:exon

position:5872205:-1
position: 5872205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRLF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CRLF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor-like factor 2
translation: MSHERSVGGRFLRTSLSTPVSGMGRFVLLGAAAVFLLGGWMALGQVGTGEGVKIQIIYFNLETVQVTWNASHYPRSNLTFHYTLNPDEAYDQCTIYILQEGHNSGCLLDAEQQDDILYFSIRNGTHPVFTASRWIYYYLKPGSPKQVSFSWHQDAVTVTCSDLSYRGLLYEVQYRSPFDTEWQSKQENTCNVTIEDLDAEKCYAFRARVKAMEDVYGPDTYPSDWSEVTCWQRGETRDSCPQTPTPPKPKLSKFILVSSLAILLMVSLLLLSLWKLWRVKKFLMPSVPDPKSTFPGLFEIHQGNFQEWITDTQNVAHLPKMAGAEPESGPEDSLVVQLAKTEADAPRTLEPQTEEKEAAGGSLQLPHQPPLPGGDVVTLGGFTFVMNDSSYVAL
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(5871939..5872205,5873808..5873892,5876197..5876317,5877952..5878114,5882005..5882138,5886062..5886228,5890450..5890552,5895227..5895371))
location: region:5871939-5895371:-1
so has part: feature:5895227-5895371:-1:exon
so has part: feature:5890450-5890552:-1:exon
so has part: feature:5886062-5886228:-1:exon
so has part: feature:5882005-5882138:-1:exon
so has part: feature:5877952-5878114:-1:exon
so has part: feature:5876197-5876317:-1:exon
so has part: feature:5873808-5873892:-1:exon
so has part: feature:5871939-5872205:-1:exon

XP_010362780.2
type: Protein
SIO_000068: ncbiprotein

position:5871939:-1
position: 5871939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5895371:-1
position: 5895371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5895227-5895371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5890450-5890552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5886062-5886228:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5882005-5882138:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5877952-5878114:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5876197-5876317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5873808-5873892:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5871939-5872205:-1:exon

LOC115895694
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895694
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5912958..5913060
location: region:5912958-5913060:1
so has part: feature:5912958-5913060:1:exon
subclass of: SO_0000623

115895694
type: Gene
SIO_000068: ncbigene

position:5912958:1
position: 5912958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5913060:1
position: 5913060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5912958-5913060:1:exon

LOC115895694
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895694
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055838.1
SIO_010081: LOC115895694
subclass of: SO_0000673
so part of: LOC115895694
location: 5912958..5913060
location: region:5912958-5913060:1
so has part: feature:5912958-5913060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5912958-5913060:1:exon

LOC115895689
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895689
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5951513..5951653)
location: region:5951513-5951653:-1
so has part: feature:5951513-5951653:-1:exon

115895689
type: Gene
SIO_000068: ncbigene

position:5951513:-1
position: 5951513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5951653:-1
position: 5951653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5951513-5951653:-1:exon

LOC115895689
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895689
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115895689
subclass of: SO_0000673
so part of: LOC115895689
location: complement(5951513..5951653)
location: region:5951513-5951653:-1
so has part: feature:5951513-5951653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5951513-5951653:-1:exon

LOC115895699
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895699
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 6044604..6044700
location: region:6044604-6044700:1
so has part: feature:6044604-6044700:1:exon

115895699
type: Gene
SIO_000068: ncbigene

position:6044604:1
position: 6044604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6044700:1
position: 6044700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6044604-6044700:1:exon

LOC115895699
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895699
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00156
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115895699
subclass of: SO_0000673
so part of: LOC115895699
location: 6044604..6044700
location: region:6044604-6044700:1
so has part: feature:6044604-6044700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6044604-6044700:1:exon

LOC115895674
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6345557..6350200)
location: region:6345557-6350200:-1
so has part: feature:6345557-6350200:-1:exon
subclass of: SO_0000010

115895674
type: Gene
SIO_000068: ncbigene

position:6345557:-1
position: 6345557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6350200:-1
position: 6350200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6345557-6350200:-1:exon

LOC115895674
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895674
product: acetylserotonin O-methyltransferase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926327.1
SIO_010081: LOC115895674
subclass of: SO_0000673
so part of: LOC115895674
location: complement(join(6345557..6345763,6346814..6346936,6349714..6349830,6350140..6350200))
location: region:6345557-6350200:-1
so has part: feature:6350140-6350200:-1:exon
so has part: feature:6349714-6349830:-1:exon
so has part: feature:6346814-6346936:-1:exon
so has part: feature:6345557-6345763:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6350140-6350200:-1:exon

position:6350140:-1
position: 6350140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6349714-6349830:-1:exon

position:6349714:-1
position: 6349714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6349830:-1
position: 6349830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6346814-6346936:-1:exon

position:6346814:-1
position: 6346814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6346936:-1
position: 6346936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6345557-6345763:-1:exon

position:6345763:-1
position: 6345763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895674
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylserotonin O-methyltransferase-like
translation: MSAKRLLEECDVGGEFSIWEECSKDVTFTKLNTATGLLIYKGRSTQMDRQNDQKHVIKNGDFFKDPLPEADLYILARILHDWADGKCLHLLERVYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTGAIYDAV
SIO_010081: LOC115895674
subclass of: SO_0000673
so part of: LOC115895674
location: complement(join(6345564..6345763,6346814..6346936,6349714..6349830,6350140..6350200))
location: region:6345564-6350200:-1
so has part: feature:6350140-6350200:-1:exon
so has part: feature:6349714-6349830:-1:exon
so has part: feature:6346814-6346936:-1:exon
so has part: feature:6345564-6345763:-1:exon

XP_030782187.1
type: Protein
SIO_000068: ncbiprotein

position:6345564:-1
position: 6345564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6350140-6350200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6349714-6349830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6346814-6346936:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6345564-6345763:-1:exon

CSF2RA
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: CSF2RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6393044..6422142
location: region:6393044-6422142:1
so has part: feature:6393044-6422142:1:exon
subclass of: SO_0000010

104663344
type: Gene
SIO_000068: ncbigene

position:6393044:1
position: 6393044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6422142:1
position: 6422142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6393044-6422142:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CSF2RA
product: colony stimulating factor 2 receptor alpha subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926328.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(6393044..6393108,6405355..6405524,6408051..6408184,6409166..6409195,6413722..6413857,6414599..6414695,6416949..6417021,6421868..6422142)
location: region:6393044-6422142:1
so has part: feature:6393044-6393108:1:exon
so has part: feature:6405355-6405524:1:exon
so has part: feature:6408051-6408184:1:exon
so has part: feature:6409166-6409195:1:exon
so has part: feature:6413722-6413857:1:exon
so has part: feature:6414599-6414695:1:exon
so has part: feature:6416949-6417021:1:exon
so has part: feature:6421868-6422142:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6393044-6393108:1:exon

position:6393108:1
position: 6393108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6405355-6405524:1:exon

position:6405355:1
position: 6405355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6405524:1
position: 6405524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6408051-6408184:1:exon

position:6408051:1
position: 6408051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6408184:1
position: 6408184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6409166-6409195:1:exon

position:6409166:1
position: 6409166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6409195:1
position: 6409195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6413722-6413857:1:exon

position:6413722:1
position: 6413722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6413857:1
position: 6413857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6414599-6414695:1:exon

position:6414599:1
position: 6414599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6414695:1
position: 6414695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6416949-6417021:1:exon

position:6416949:1
position: 6416949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6417021:1
position: 6417021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6421868-6422142:1:exon

position:6421868:1
position: 6421868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CSF2RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha
translation: MQTWELFLSEGWCIPASMGATRRREIQCPYYIEDSGTHVGCHLGNLSGLTSRNYFLVNGTSQEIGIQFFDSLLDTKKIERFNPPGNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLPINVSGDLENRYNFPSSEPRAKHAVKIRAADVRILNWSSWSEATEFGSDDRNPSSVHIYVLLILGTLVCGLVFGFLFKRVQRLFPPVPQIKDKLNDNHDVEDEIIWEEFTPEEGKSYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(6393044..6393108,6405355..6405524,6408051..6408184,6409166..6409195,6413722..6413857,6414599..6414695,6416949..6417021,6421868..6421945)
location: region:6393044-6421945:1
so has part: feature:6393044-6393108:1:exon
so has part: feature:6405355-6405524:1:exon
so has part: feature:6408051-6408184:1:exon
so has part: feature:6409166-6409195:1:exon
so has part: feature:6413722-6413857:1:exon
so has part: feature:6414599-6414695:1:exon
so has part: feature:6416949-6417021:1:exon
so has part: feature:6421868-6421945:1:exon

XP_030782188.1
type: Protein
SIO_000068: ncbiprotein

position:6421945:1
position: 6421945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6393044-6393108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6405355-6405524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6408051-6408184:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6409166-6409195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6413722-6413857:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6414599-6414695:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6416949-6417021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6421868-6421945:1:exon

IL3RA
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: IL3RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6436816..6480290
location: region:6436816-6480290:1
so has part: feature:6436816-6480290:1:exon
subclass of: SO_0000010

104663347
type: Gene
SIO_000068: ncbigene

position:6436816:1
position: 6436816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6480290:1
position: 6480290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6436816-6480290:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: IL3RA
product: interleukin 3 receptor subunit alpha, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030926264.1
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6436816..6436919,6453669..6453770,6456111..6456229,6457420..6457534,6458757..6458889,6458977..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6480260)
location: region:6436816-6480260:1
so has part: feature:6436816-6436919:1:exon
so has part: feature:6453669-6453770:1:exon
so has part: feature:6456111-6456229:1:exon
so has part: feature:6457420-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458977-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6480260:1:exon

position:6480260:1
position: 6480260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6436816-6436919:1:exon

position:6436919:1
position: 6436919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6453669-6453770:1:exon

position:6453669:1
position: 6453669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6453770:1
position: 6453770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6456111-6456229:1:exon

position:6456111:1
position: 6456111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6456229:1
position: 6456229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6457420-6457534:1:exon

position:6457420:1
position: 6457420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6457534:1
position: 6457534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6458757-6458889:1:exon

position:6458757:1
position: 6458757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6458889:1
position: 6458889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6458977-6459161:1:exon

position:6458977:1
position: 6458977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6459161:1
position: 6459161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6462123-6462238:1:exon

position:6462123:1
position: 6462123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6462238:1
position: 6462238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6464601-6464627:1:exon

position:6464601:1
position: 6464601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6464627:1
position: 6464627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6467627-6467741:1:exon

position:6467627:1
position: 6467627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6467741:1
position: 6467741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6475495-6475600:1:exon

position:6475495:1
position: 6475495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6475600:1
position: 6475600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6478954-6479035:1:exon

position:6478954:1
position: 6478954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6479035:1
position: 6479035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6479925-6480260:1:exon

position:6479925:1
position: 6479925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: IL3RA
product: interleukin 3 receptor subunit alpha, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030926265.1
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6446752..6447096,6453669..6453770,6456111..6456229,6457420..6457534,6458757..6458889,6458980..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6480263)
location: region:6446752-6480263:1
so has part: feature:6446752-6447096:1:exon
so has part: feature:6453669-6453770:1:exon
so has part: feature:6456111-6456229:1:exon
so has part: feature:6457420-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458980-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6480263:1:exon

position:6446752:1
position: 6446752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6480263:1
position: 6480263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6446752-6447096:1:exon

position:6447096:1
position: 6447096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6453669-6453770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6456111-6456229:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6457420-6457534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6458757-6458889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6458980-6459161:1:exon

position:6458980:1
position: 6458980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6462123-6462238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6464601-6464627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6467627-6467741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6475495-6475600:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6479925-6480263:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: IL3RA
product: interleukin 3 receptor subunit alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030926263.1
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6446754..6447096,6453672..6453770,6456111..6456229,6457420..6457534,6458757..6458889,6458977..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6480260)
location: region:6446754-6480260:1
so has part: feature:6446754-6447096:1:exon
so has part: feature:6453672-6453770:1:exon
so has part: feature:6456111-6456229:1:exon
so has part: feature:6457420-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458977-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6480260:1:exon

position:6446754:1
position: 6446754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6446754-6447096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6453672-6453770:1:exon

position:6453672:1
position: 6453672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6456111-6456229:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6457420-6457534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6458757-6458889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6458977-6459161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6462123-6462238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6464601-6464627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6467627-6467741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6475495-6475600:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6479925-6480260:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: IL3RA
product: interleukin 3 receptor subunit alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010364483.2
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6446755..6447096,6453669..6453770,6456111..6456229,6457420..6457534,6458757..6458889,6458977..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6480215)
location: region:6446755-6480215:1
so has part: feature:6446755-6447096:1:exon
so has part: feature:6453669-6453770:1:exon
so has part: feature:6456111-6456229:1:exon
so has part: feature:6457420-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458977-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6480215:1:exon

position:6446755:1
position: 6446755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6480215:1
position: 6480215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6446755-6447096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6453669-6453770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6456111-6456229:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6457420-6457534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6458757-6458889:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6458977-6459161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6462123-6462238:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6464601-6464627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6467627-6467741:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6475495-6475600:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6479925-6480215:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: IL3RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X2
translation: MVLLWLTLLLVATPCLLQTKEDRNPPIKNLRMKQKTQQLMWDLNRNVTDVECIKDSDDFMPAMNNSYCQFGAISVCEVTNYTVRVASPPFSTWILFPENSGTPRAGAENLTCWVHDVDFLSCSWAVGPAAPADVQYDLYLNNLNSHEQHKCLHYNTDARGTRIGCRFDDIARLSSGSQRSHILVRGRSAAFSIPCTDQFVVFSQIERLTPPHMTAECNKTHSFMQWKMRSHFNRKFRYELQIQKRMQPVRTEQVRDTTSFQLPNPGTYTVQIRARETVYEFLSAWSTPQRFECDPEEGASSPAWRTSLPIALGTLLAVLCVFLICRRYLVMQRLFPRIPHMKDPIGDSFQDDKLVIWEAGKAGLEECLVSEVQVVEKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6453707..6453770,6456111..6456229,6457420..6457534,6458757..6458889,6458977..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6479999)
location: region:6453707-6479999:1
so has part: feature:6453707-6453770:1:exon
so has part: feature:6456111-6456229:1:exon
so has part: feature:6457420-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458977-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6479999:1:exon

XP_030782123.1
type: Protein
SIO_000068: ncbiprotein

position:6453707:1
position: 6453707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6479999:1
position: 6479999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6453707-6453770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6456111-6456229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6457420-6457534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6458757-6458889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6458977-6459161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6462123-6462238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6464601-6464627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6467627-6467741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6475495-6475600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6479925-6479999:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: IL3RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X2
translation: MVLLWLTLLLVATPCLLQTKEDRNPPIKNLRMKQKTQQLMWDLNRNVTDVECIKDSDDFMPAMNNSYCQFGAISVCEVTNYTVRVASPPFSTWILFPENSGTPRAGAENLTCWVHDVDFLSCSWAVGPAAPADVQYDLYLNNLNSHEQHKCLHYNTDARGTRIGCRFDDIARLSSGSQRSHILVRGRSAAFSIPCTDQFVVFSQIERLTPPHMTAECNKTHSFMQWKMRSHFNRKFRYELQIQKRMQPVRTEQVRDTTSFQLPNPGTYTVQIRARETVYEFLSAWSTPQRFECDPEEGASSPAWRTSLPIALGTLLAVLCVFLICRRYLVMQRLFPRIPHMKDPIGDSFQDDKLVIWEAGKAGLEECLVSEVQVVEKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6453707..6453770,6456111..6456229,6457420..6457534,6458757..6458889,6458977..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6479999)
location: region:6453707-6479999:1
so has part: feature:6453707-6453770:1:exon
so has part: feature:6456111-6456229:1:exon
so has part: feature:6457420-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458977-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6479999:1:exon

XP_030782124.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6453707-6453770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6456111-6456229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6457420-6457534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6458757-6458889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6458977-6459161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6462123-6462238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6464601-6464627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6467627-6467741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6475495-6475600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6479925-6479999:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: IL3RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X2
translation: MVLLWLTLLLVATPCLLQTKEDRNPPIKNLRMKQKTQQLMWDLNRNVTDVECIKDSDDFMPAMNNSYCQFGAISVCEVTNYTVRVASPPFSTWILFPENSGTPRAGAENLTCWVHDVDFLSCSWAVGPAAPADVQYDLYLNNLNSHEQHKCLHYNTDARGTRIGCRFDDIARLSSGSQRSHILVRGRSAAFSIPCTDQFVVFSQIERLTPPHMTAECNKTHSFMQWKMRSHFNRKFRYELQIQKRMQPVRTEQVRDTTSFQLPNPGTYTVQIRARETVYEFLSAWSTPQRFECDPEEGASSPAWRTSLPIALGTLLAVLCVFLICRRYLVMQRLFPRIPHMKDPIGDSFQDDKLVIWEAGKAGLEECLVSEVQVVEKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6453707..6453770,6456111..6456229,6457420..6457534,6458757..6458889,6458977..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6479999)
location: region:6453707-6479999:1
so has part: feature:6453707-6453770:1:exon
so has part: feature:6456111-6456229:1:exon
so has part: feature:6457420-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458977-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6479999:1:exon

XP_010362785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6453707-6453770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6456111-6456229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6457420-6457534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6458757-6458889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6458977-6459161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6462123-6462238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6464601-6464627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6467627-6467741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6475495-6475600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6479925-6479999:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: IL3RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X3
translation: MVLLWLTLLLVATPCLLQTKEDRNPPIKNLRMKQKTQQLMWDLNRNVTDVECIKDSDDFMPAMNNSYCQFGAISVCEVTNYTVRVASPPFSTWILFPENSGTPRAGAENLTCWVHDVDFLSCSWAVGPAAPADVQYDLYLNNLNHEQHKCLHYNTDARGTRIGCRFDDIARLSSGSQRSHILVRGRSAAFSIPCTDQFVVFSQIERLTPPHMTAECNKTHSFMQWKMRSHFNRKFRYELQIQKRMQPVRTEQVRDTTSFQLPNPGTYTVQIRARETVYEFLSAWSTPQRFECDPEEGASSPAWRTSLPIALGTLLAVLCVFLICRRYLVMQRLFPRIPHMKDPIGDSFQDDKLVIWEAGKAGLEECLVSEVQVVEKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6453707..6453770,6456111..6456229,6457420..6457534,6458757..6458889,6458980..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6479999)
location: region:6453707-6479999:1
so has part: feature:6453707-6453770:1:exon
so has part: feature:6456111-6456229:1:exon
so has part: feature:6457420-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458980-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6479999:1:exon

XP_030782125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6453707-6453770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6456111-6456229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6457420-6457534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6458757-6458889:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6458980-6459161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6462123-6462238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6464601-6464627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6467627-6467741:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6475495-6475600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6479925-6479999:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: IL3RA
product: interleukin 3 receptor subunit alpha, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_010364484.2
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6456111..6456229,6457394..6457534,6458757..6458889,6458977..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6480260)
location: region:6456111-6480260:1
so has part: feature:6456111-6456229:1:exon
so has part: feature:6457394-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458977-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6480260:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6456111-6456229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6457394-6457534:1:exon

position:6457394:1
position: 6457394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6458757-6458889:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6458977-6459161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6462123-6462238:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6464601-6464627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6467627-6467741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6475495-6475600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6479925-6480260:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: IL3RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X4
translation: MNNSYCQFGAISVCEVTNYTVRVASPPFSTWILFPENSGTPRAGAENLTCWVHDVDFLSCSWAVGPAAPADVQYDLYLNNLNSHEQHKCLHYNTDARGTRIGCRFDDIARLSSGSQRSHILVRGRSAAFSIPCTDQFVVFSQIERLTPPHMTAECNKTHSFMQWKMRSHFNRKFRYELQIQKRMQPVRTEQVRDTTSFQLPNPGTYTVQIRARETVYEFLSAWSTPQRFECDPEEGASSPAWRTSLPIALGTLLAVLCVFLICRRYLVMQRLFPRIPHMKDPIGDSFQDDKLVIWEAGKAGLEECLVSEVQVVEKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6457423..6457534,6458757..6458889,6458977..6459161,6462123..6462238,6464601..6464627,6467627..6467741,6475495..6475600,6478954..6479035,6479925..6479999)
location: region:6457423-6479999:1
so has part: feature:6457423-6457534:1:exon
so has part: feature:6458757-6458889:1:exon
so has part: feature:6458977-6459161:1:exon
so has part: feature:6462123-6462238:1:exon
so has part: feature:6464601-6464627:1:exon
so has part: feature:6467627-6467741:1:exon
so has part: feature:6475495-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6479999:1:exon

XP_010362786.1
type: Protein
SIO_000068: ncbiprotein

position:6457423:1
position: 6457423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6457423-6457534:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6458757-6458889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6458977-6459161:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6462123-6462238:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6464601-6464627:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6467627-6467741:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6475495-6475600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6479925-6479999:1:exon

IL3RA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: IL3RA
product: interleukin 3 receptor subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004055823.1
SIO_010081: IL3RA
so part of: IL3RA
location: join(6473032..6473386,6473793..6475600,6478954..6478996)
location: region:6473032-6478996:1
so has part: feature:6473032-6473386:1:exon
so has part: feature:6473793-6475600:1:exon
so has part: feature:6478954-6478996:1:exon

position:6473032:1
position: 6473032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6478996:1
position: 6478996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6473032-6473386:1:exon

position:6473386:1
position: 6473386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6473793-6475600:1:exon

position:6473793:1
position: 6473793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6478954-6478996:1:exon

IL3RA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: IL3RA
product: interleukin 3 receptor subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_004055822.1
SIO_010081: IL3RA
so part of: IL3RA
location: join(6473424..6475600,6478954..6478996)
location: region:6473424-6478996:1
so has part: feature:6473424-6475600:1:exon
so has part: feature:6478954-6478996:1:exon

position:6473424:1
position: 6473424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6473424-6475600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6478954-6478996:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: IL3RA
product: interleukin 3 receptor subunit alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_030926262.1
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6473754..6475600,6478954..6479035,6479925..6480290)
location: region:6473754-6480290:1
so has part: feature:6473754-6475600:1:exon
so has part: feature:6478954-6479035:1:exon
so has part: feature:6479925-6480290:1:exon

position:6473754:1
position: 6473754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6473754-6475600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6478954-6479035:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6479925-6480290:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: IL3RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X1
translation: MSLRVPGRRVPGWGSEARMSLLVPDAGFRAGAGRPGCPSLSRDAGFRAGDGGPGCPSLSRDAGFRAGDGGPGCPSLTRDAGFRAGDGGPGCPSGSRDAGFRAGDGGPGCPSGSRDAGFRAGDGGPGCPSLSPDAGFRAGAGRPGCPSLSRDAGFRAGDGGPGCPSLSRDAGFRAGDGGPGCPSLSPDAGFRAGAGRPGCPSLSRDAGFRAGDGGPGCPSGSRDAGFRAGDGGPGCPSGSGRRVPGWGWEARMSLRVPGRRVPGWGSEARMSLLVPDAGFRAGAGRPGCPSLSRDAGFRAGDGGPGCPSLSRDAGFRAGDGGPGCPSLTRDAGFRAGDGGPGCPSGSRDAGFRAGDGGPGCPSGSRDAGFRAGDGGPGCPSLSPDAGFRAGAGRPGCPSLSRDAGFRAGDGGPGCPSLSRDAGFRAGDGGPGCPSLSPDAGFRAGDGGPGCPCLARDAGGPQVVMVPVQVAVLGCPPDAPHVAATCVLPRAPGRAQRPGSPQGGPRSVTLAPFPPRVRPGGGRELACLADVAADRAGDAAGRALCLPHLQKVSGDAETISPHPTHERPHR
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(6473951..6475600,6478954..6479013)
location: region:6473951-6479013:1
so has part: feature:6473951-6475600:1:exon
so has part: feature:6478954-6479013:1:exon

XP_030782122.1
type: Protein
SIO_000068: ncbiprotein

position:6473951:1
position: 6473951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6479013:1
position: 6479013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6473951-6475600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6478954-6479013:1:exon

SLC25A6
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: SLC25A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6485985..6492035)
location: region:6485985-6492035:-1
so has part: feature:6485985-6492035:-1:exon
subclass of: SO_0000010

104663348
type: Gene
SIO_000068: ncbigene

position:6485985:-1
position: 6485985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6492035:-1
position: 6492035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6485985-6492035:-1:exon

SLC25A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: SLC25A6
product: solute carrier family 25 member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 mRNAs, 2791 ESTs, 28 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010364486.2
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(join(6485985..6486596,6487447..6487587,6488688..6489174,6491263..6492035))
location: region:6485985-6492035:-1
so has part: feature:6491263-6492035:-1:exon
so has part: feature:6488688-6489174:-1:exon
so has part: feature:6487447-6487587:-1:exon
so has part: feature:6485985-6486596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6491263-6492035:-1:exon

position:6491263:-1
position: 6491263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6488688-6489174:-1:exon

position:6488688:-1
position: 6488688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6489174:-1
position: 6489174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6487447-6487587:-1:exon

position:6487447:-1
position: 6487447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6487587:-1
position: 6487587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6485985-6486596:-1:exon

position:6486596:-1
position: 6486596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: SLC25A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP/ATP translocase 3
translation: MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(join(6486439..6486596,6487447..6487587,6488688..6489174,6491263..6491373))
location: region:6486439-6491373:-1
so has part: feature:6491263-6491373:-1:exon
so has part: feature:6488688-6489174:-1:exon
so has part: feature:6487447-6487587:-1:exon
so has part: feature:6486439-6486596:-1:exon

XP_010362788.1
type: Protein
SIO_000068: ncbiprotein

position:6486439:-1
position: 6486439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6491373:-1
position: 6491373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6491263-6491373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6488688-6489174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6487447-6487587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6486439-6486596:-1:exon

ASMT
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: ASMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6505210..6544255)
location: region:6505210-6544255:-1
so has part: feature:6505210-6544255:-1:exon
subclass of: SO_0000010

104663349
type: Gene
SIO_000068: ncbigene

position:6505210:-1
position: 6505210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6544255:-1
position: 6544255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6505210-6544255:-1:exon

ASMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ASMT
product: acetylserotonin O-methyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84 ESTs, 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926266.1
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: complement(join(6505210..6505560,6509333..6509455,6519803..6519946,6522423..6522555,6525079..6525147,6536457..6536581,6538330..6538504,6544172..6544255))
location: region:6505210-6544255:-1
so has part: feature:6544172-6544255:-1:exon
so has part: feature:6538330-6538504:-1:exon
so has part: feature:6536457-6536581:-1:exon
so has part: feature:6525079-6525147:-1:exon
so has part: feature:6522423-6522555:-1:exon
so has part: feature:6519803-6519946:-1:exon
so has part: feature:6509333-6509455:-1:exon
so has part: feature:6505210-6505560:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6544172-6544255:-1:exon

position:6544172:-1
position: 6544172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6538330-6538504:-1:exon

position:6538330:-1
position: 6538330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6538504:-1
position: 6538504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6536457-6536581:-1:exon

position:6536457:-1
position: 6536457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6536581:-1
position: 6536581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6525079-6525147:-1:exon

position:6525079:-1
position: 6525079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6525147:-1
position: 6525147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6522423-6522555:-1:exon

position:6522423:-1
position: 6522423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6522555:-1
position: 6522555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6519803-6519946:-1:exon

position:6519803:-1
position: 6519803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6519946:-1
position: 6519946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6509333-6509455:-1:exon

position:6509333:-1
position: 6509333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6509455:-1
position: 6509455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6505210-6505560:-1:exon

position:6505560:-1
position: 6505560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ASMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylserotonin O-methyltransferase
translation: MGSSGDDGYRLLNEYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVEASSHGTELLLDTCVSLKLLKVETRAGKAFYENTELSSAYLTRVSPTSQCSLLKYLGRTSYGCWGHLADAFAIREGRNQHHRVLGKKVDDLFQDAYYRSPETQLRFMQAMHGVAKLTARQVATAFDLSRFSSACDVGGCTGALARELAREYPGLQVTVFDLPDVVELAVHFQPAGPQAAQIHFAAGDFFRDPLPSAELYVLCRILHDWSDDKVHKLLSKVAESCKPGAGLLLVETLLDEKKREAQGSLIQSLNMLVQTEGRERSRGEYQCLLELHGFHQVQVVHLEGVLDAMLATRVAP
SIO_010081: ASMT
subclass of: SO_0000673
so part of: ASMT
location: complement(join(6505340..6505560,6509333..6509455,6519803..6519946,6522423..6522555,6525079..6525147,6536457..6536581,6538330..6538504,6544172..6544240))
location: region:6505340-6544240:-1
so has part: feature:6544172-6544240:-1:exon
so has part: feature:6538330-6538504:-1:exon
so has part: feature:6536457-6536581:-1:exon
so has part: feature:6525079-6525147:-1:exon
so has part: feature:6522423-6522555:-1:exon
so has part: feature:6519803-6519946:-1:exon
so has part: feature:6509333-6509455:-1:exon
so has part: feature:6505340-6505560:-1:exon

XP_030782126.1
type: Protein
SIO_000068: ncbiprotein

position:6505340:-1
position: 6505340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6544240:-1
position: 6544240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6544172-6544240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6538330-6538504:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6536457-6536581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6525079-6525147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6522423-6522555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6519803-6519946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6509333-6509455:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6505340-6505560:-1:exon

AKAP17A
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: AKAP17A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6552995..6565357)
location: region:6552995-6565357:-1
so has part: feature:6552995-6565357:-1:exon
subclass of: SO_0000010

104663351
type: Gene
SIO_000068: ncbigene

position:6552995:-1
position: 6552995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6565357:-1
position: 6565357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6552995-6565357:-1:exon

AKAP17A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: AKAP17A
product: A-kinase anchoring protein 17A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 154 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030926257.1
SIO_010081: AKAP17A
subclass of: SO_0000673
so part of: AKAP17A
location: complement(join(6552995..6554915,6556149..6556389,6561441..6561589,6562700..6563480,6565173..6565357))
location: region:6552995-6565357:-1
so has part: feature:6565173-6565357:-1:exon
so has part: feature:6562700-6563480:-1:exon
so has part: feature:6561441-6561589:-1:exon
so has part: feature:6556149-6556389:-1:exon
so has part: feature:6552995-6554915:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6565173-6565357:-1:exon

position:6565173:-1
position: 6565173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6562700-6563480:-1:exon

position:6562700:-1
position: 6562700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6563480:-1
position: 6563480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6561441-6561589:-1:exon

position:6561441:-1
position: 6561441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6561589:-1
position: 6561589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6556149-6556389:-1:exon

position:6556149:-1
position: 6556149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6556389:-1
position: 6556389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6552995-6554915:-1:exon

position:6554915:-1
position: 6554915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AKAP17A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: AKAP17A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A-kinase anchor protein 17A
translation: MAAATIVHDTSEAVELCPAYGLYLKPITKMTISVALPQLKQPGKSISNWEVMERLKGMVHNHQFSTLRISKSTMDFIRFEGEVENKSLVKSFLACLDGKTIKLSGFSDILKVRAAEFKIDFPTRHDWDSFFRDAKDMNETLPGERPDTIHLEGLPCKWFALKESGSEKPSEDVLVKVFEKFGEIRNVDIPMLDPYREEMTGRNFHTFSFGGHLNFEAYVQYREYVGFIQAMSALRGMKLMYKGEDGKAVACNIKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKRREKEAEERQRAEERKQKELEELERERKREEKLRKREQKQRDRELRRNQKKLEKLQAEEQKQLQEKIKLEERKLLLAQRNLQSIRLIAELLSRAKAVKLQEQEQKEEKLRLQQQEERRRLQEAELRRVEEEKERALGLQRKERELRERLLSILLSKKPDDAHAHDELGVAHADLLQPVLDILQTVSSGCVSAAALHPLGGQLPASAPKESPAHPEADGAPKSVNGSVAEEAPCREGQSSCRVVPEDGSPEKRCPGGVLSCIPDNNQQPKGLPACEQNVSKKDTRSEQDKCNREPSKGRGRASGDGLDDRHKRERSRARRAGSREDGRPRKERRPHKKRAYKDDSPRRRSASPDHTRSRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSKHRSTWNR
SIO_010081: AKAP17A
subclass of: SO_0000673
so part of: AKAP17A
location: complement(join(6553980..6554915,6556149..6556389,6561441..6561589,6562700..6563461))
location: region:6553980-6563461:-1
so has part: feature:6562700-6563461:-1:exon
so has part: feature:6561441-6561589:-1:exon
so has part: feature:6556149-6556389:-1:exon
so has part: feature:6553980-6554915:-1:exon

XP_030782117.1
type: Protein
SIO_000068: ncbiprotein

position:6553980:-1
position: 6553980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6563461:-1
position: 6563461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6562700-6563461:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6561441-6561589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6556149-6556389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6553980-6554915:-1:exon

LOC115895639
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6565488..6571887
location: region:6565488-6571887:1
so has part: feature:6565488-6571887:1:exon
subclass of: SO_0000011

115895639
type: Gene
SIO_000068: ncbigene

position:6565488:1
position: 6565488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6571887:1
position: 6571887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6565488-6571887:1:exon

LOC115895639
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC115895639
product: uncharacterized LOC115895639
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004055821.1
SIO_010081: LOC115895639
subclass of: SO_0000673
so part of: LOC115895639
location: join(6565488..6565546,6567476..6567571,6570888..6571887)
location: region:6565488-6571887:1
so has part: feature:6565488-6565546:1:exon
so has part: feature:6567476-6567571:1:exon
so has part: feature:6570888-6571887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6565488-6565546:1:exon

position:6565546:1
position: 6565546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6567476-6567571:1:exon

position:6567476:1
position: 6567476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6567571:1
position: 6567571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6570888-6571887:1:exon

position:6570888:1
position: 6570888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

P2RY8
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6603704..6675078
location: region:6603704-6675078:1
so has part: feature:6603704-6675078:1:exon
subclass of: SO_0000010

104663350
type: Gene
SIO_000068: ncbigene

position:6603704:1
position: 6603704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6675078:1
position: 6675078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603704-6675078:1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030926250.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: join(6603704..6604050,6641430..6641608,6658994..6659056,6671795..6675078)
location: region:6603704-6675078:1
so has part: feature:6603704-6604050:1:exon
so has part: feature:6641430-6641608:1:exon
so has part: feature:6658994-6659056:1:exon
so has part: feature:6671795-6675078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603704-6604050:1:exon

position:6604050:1
position: 6604050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6641430-6641608:1:exon

position:6641430:1
position: 6641430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6641608:1
position: 6641608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6658994-6659056:1:exon

position:6658994:1
position: 6658994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6659056:1
position: 6659056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6671795-6675078:1:exon

position:6671795:1
position: 6671795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030926251.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: join(6603704..6604050,6658994..6659056,6671795..6675078)
location: region:6603704-6675078:1
so has part: feature:6603704-6604050:1:exon
so has part: feature:6658994-6659056:1:exon
so has part: feature:6671795-6675078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603704-6604050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6658994-6659056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6671795-6675078:1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_030926252.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: join(6603704..6604050,6671795..6675078)
location: region:6603704-6675078:1
so has part: feature:6603704-6604050:1:exon
so has part: feature:6671795-6675078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603704-6604050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6671795-6675078:1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_030926246.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: join(6603705..6604050,6641430..6641608,6658994..6659056,6671721..6675078)
location: region:6603705-6675078:1
so has part: feature:6603705-6604050:1:exon
so has part: feature:6641430-6641608:1:exon
so has part: feature:6658994-6659056:1:exon
so has part: feature:6671721-6675078:1:exon

position:6603705:1
position: 6603705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603705-6604050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6641430-6641608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6658994-6659056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6671721-6675078:1:exon

position:6671721:1
position: 6671721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_030926245.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: join(6603705..6604050,6641430..6641608,6671721..6675078)
location: region:6603705-6675078:1
so has part: feature:6603705-6604050:1:exon
so has part: feature:6641430-6641608:1:exon
so has part: feature:6671721-6675078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603705-6604050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6641430-6641608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6671721-6675078:1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_030926249.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: join(6603705..6604050,6641430..6641608,6671795..6675078)
location: region:6603705-6675078:1
so has part: feature:6603705-6604050:1:exon
so has part: feature:6641430-6641608:1:exon
so has part: feature:6671795-6675078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603705-6604050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6641430-6641608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6671795-6675078:1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_030926247.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: join(6603705..6604050,6658994..6659056,6671721..6675078)
location: region:6603705-6675078:1
so has part: feature:6603705-6604050:1:exon
so has part: feature:6658994-6659056:1:exon
so has part: feature:6671721-6675078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603705-6604050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6658994-6659056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6671721-6675078:1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_030926244.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: join(6603705..6604050,6671721..6675078)
location: region:6603705-6675078:1
so has part: feature:6603705-6604050:1:exon
so has part: feature:6671721-6675078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603705-6604050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6671721-6675078:1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030926248.1
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: join(6670208..6670657,6671721..6675078)
location: region:6670208-6675078:1
so has part: feature:6670208-6670657:1:exon
so has part: feature:6671721-6675078:1:exon

position:6670208:1
position: 6670208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6670208-6670657:1:exon

position:6670657:1
position: 6670657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6671721-6675078:1:exon

P2RY8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: P2RY8
product: P2Y receptor family member 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010364488.2
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671563..6675078
location: region:6671563-6675078:1
so has part: feature:6671563-6675078:1:exon

position:6671563:1
position: 6671563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6671563-6675078:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X1
translation: MEETGSLANAFPRPPWSPGATLRSPRGSHLPTCAPEPRTLPLQSPGEDPSRMQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671666..6672898
location: region:6671666-6672898:1
so has part: feature:6671666-6672898:1:exon

XP_010362790.2
type: Protein
SIO_000068: ncbiprotein

position:6671666:1
position: 6671666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6672898:1
position: 6672898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6671666-6672898:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X2
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671819..6672898
location: region:6671819-6672898:1
so has part: feature:6671819-6672898:1:exon

XP_030782104.1
type: Protein
SIO_000068: ncbiprotein

position:6671819:1
position: 6671819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6671819-6672898:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X2
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671819..6672898
location: region:6671819-6672898:1
so has part: feature:6671819-6672898:1:exon

XP_030782105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6671819-6672898:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X2
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671819..6672898
location: region:6671819-6672898:1
so has part: feature:6671819-6672898:1:exon

XP_030782106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6671819-6672898:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X2
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671819..6672898
location: region:6671819-6672898:1
so has part: feature:6671819-6672898:1:exon

XP_030782107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6671819-6672898:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X2
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671819..6672898
location: region:6671819-6672898:1
so has part: feature:6671819-6672898:1:exon

XP_030782108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6671819-6672898:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X2
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671819..6672898
location: region:6671819-6672898:1
so has part: feature:6671819-6672898:1:exon

XP_030782109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6671819-6672898:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X2
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671819..6672898
location: region:6671819-6672898:1
so has part: feature:6671819-6672898:1:exon

XP_030782110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6671819-6672898:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X2
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671819..6672898
location: region:6671819-6672898:1
so has part: feature:6671819-6672898:1:exon

XP_030782111.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6671819-6672898:1:exon

P2RY8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: P2RY8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: P2Y purinoceptor 8 isoform X2
translation: MQVPNSTGPDNATLQMLRNPAIAVALPVVYSLVALVSIPGNLFSLWVLCRRIGPKSPSVIFMINLSVTDLMLASVLPFQIYYHCNRNHWVFGVLLCNVVTVVFYANMYSSILTMTCISVERFLGVLYPLSSKRWRRRRYAVAACAGTWLLLLAALSPLARTDLTYPVHALGIVTCFDVLKWTMLPSVAMWAVFLFTIFILLFLIPFVVTVACYTATILKLLRTEEAHGREQRRRAVGLAVVVLLAFVTCFAPNNFVLLAHIVGRLFYGKSYYHVYKLTLCLSCLNNCLDPFVYYFASREFQLRLREYLGCRGVSRDSLDTRRESLFSARTTSVRSEAGAHPEGLEGAPRPGLMRQESEF
SIO_010081: P2RY8
subclass of: SO_0000673
so part of: P2RY8
location: 6671819..6672898
location: region:6671819-6672898:1
so has part: feature:6671819-6672898:1:exon

XP_030782112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6671819-6672898:1:exon

LOC115895690
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895690
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6749220..6749326)
location: region:6749220-6749326:-1
so has part: feature:6749220-6749326:-1:exon
subclass of: SO_0000623

115895690
type: Gene
SIO_000068: ncbigene

position:6749220:-1
position: 6749220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6749326:-1
position: 6749326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6749220-6749326:-1:exon

LOC115895690
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895690
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055834.1
SIO_010081: LOC115895690
subclass of: SO_0000673
so part of: LOC115895690
location: complement(6749220..6749326)
location: region:6749220-6749326:-1
so has part: feature:6749220-6749326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6749220-6749326:-1:exon

LOC115895654
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6756041..6756983)
location: region:6756041-6756983:-1
so has part: feature:6756041-6756983:-1:exon
subclass of: SO_0000010

115895654
type: Gene
SIO_000068: ncbigene

position:6756041:-1
position: 6756041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6756983:-1
position: 6756983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6756041-6756983:-1:exon

LOC115895654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895654
product: putative ankyrin repeat domain-containing protein 20A5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926309.1
SIO_010081: LOC115895654
subclass of: SO_0000673
so part of: LOC115895654
location: complement(join(6756041..6756220,6756383..6756497,6756756..6756983))
location: region:6756041-6756983:-1
so has part: feature:6756756-6756983:-1:exon
so has part: feature:6756383-6756497:-1:exon
so has part: feature:6756041-6756220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6756756-6756983:-1:exon

position:6756756:-1
position: 6756756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6756383-6756497:-1:exon

position:6756383:-1
position: 6756383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6756497:-1
position: 6756497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6756041-6756220:-1:exon

position:6756220:-1
position: 6756220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ankyrin repeat domain-containing protein 20A5
translation: MKLFGFGSRRGQKVLGSTDHVYTGSGYRIRDSELQKIHRAAVKGDAAKVEGCLARRSGDLDALDKQHRTALHLACASGHAKVVTLLINRKCQIDICDKENRTPLIQAVHCQEEACAVILLEHGANPNLKDIYGNTALHYAVYKESTSLAEKLLSHGANIEALDKV
SIO_010081: LOC115895654
subclass of: SO_0000673
so part of: LOC115895654
location: complement(join(6756041..6756220,6756383..6756497,6756756..6756958))
location: region:6756041-6756958:-1
so has part: feature:6756756-6756958:-1:exon
so has part: feature:6756383-6756497:-1:exon
so has part: feature:6756041-6756220:-1:exon

XP_030782169.1
type: Protein
SIO_000068: ncbiprotein

position:6756958:-1
position: 6756958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6756756-6756958:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6756383-6756497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6756041-6756220:-1:exon

LOC115895634
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6922176..6923723
location: region:6922176-6923723:1
so has part: feature:6922176-6923723:1:exon
subclass of: SO_0000011

115895634
type: Gene
SIO_000068: ncbigene

position:6922176:1
position: 6922176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6923723:1
position: 6923723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6922176-6923723:1:exon

LOC115895634
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC115895634
product: uncharacterized LOC115895634
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST
transcript id: XR_004055809.1
SIO_010081: LOC115895634
subclass of: SO_0000673
so part of: LOC115895634
location: join(6922176..6922285,6923471..6923723)
location: region:6922176-6923723:1
so has part: feature:6922176-6922285:1:exon
so has part: feature:6923471-6923723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6922176-6922285:1:exon

position:6922285:1
position: 6922285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6923471-6923723:1:exon

position:6923471:1
position: 6923471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115895642
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7002658..7014505
location: region:7002658-7014505:1
so has part: feature:7002658-7014505:1:exon
subclass of: SO_0000010

115895642
type: Gene
SIO_000068: ncbigene

position:7002658:1
position: 7002658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7014505:1
position: 7014505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7002658-7014505:1:exon

LOC115895642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895642
product: RNA-binding motif protein, Y chromosome, family 1 member F/J-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 17 Proteins
transcript id: XM_030926275.1
SIO_010081: LOC115895642
subclass of: SO_0000673
so part of: LOC115895642
location: join(7002658..7002766,7003235..7003338,7006324..7006501,7008415..7008567,7010550..7010664,7011606..7011716,7012079..7012189,7012555..7012665,7013507..7013617,7013716..7013804,7014209..7014505)
location: region:7002658-7014505:1
so has part: feature:7002658-7002766:1:exon
so has part: feature:7003235-7003338:1:exon
so has part: feature:7006324-7006501:1:exon
so has part: feature:7008415-7008567:1:exon
so has part: feature:7010550-7010664:1:exon
so has part: feature:7011606-7011716:1:exon
so has part: feature:7012079-7012189:1:exon
so has part: feature:7012555-7012665:1:exon
so has part: feature:7013507-7013617:1:exon
so has part: feature:7013716-7013804:1:exon
so has part: feature:7014209-7014505:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7002658-7002766:1:exon

position:7002766:1
position: 7002766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7003235-7003338:1:exon

position:7003235:1
position: 7003235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7003338:1
position: 7003338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7006324-7006501:1:exon

position:7006324:1
position: 7006324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7006501:1
position: 7006501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7008415-7008567:1:exon

position:7008415:1
position: 7008415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7008567:1
position: 7008567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7010550-7010664:1:exon

position:7010550:1
position: 7010550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7010664:1
position: 7010664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7011606-7011716:1:exon

position:7011606:1
position: 7011606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7011716:1
position: 7011716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7012079-7012189:1:exon

position:7012079:1
position: 7012079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7012189:1
position: 7012189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7012555-7012665:1:exon

position:7012555:1
position: 7012555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7012665:1
position: 7012665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7013507-7013617:1:exon

position:7013507:1
position: 7013507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7013617:1
position: 7013617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7013716-7013804:1:exon

position:7013716:1
position: 7013716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7013804:1
position: 7013804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7014209-7014505:1:exon

position:7014209:1
position: 7014209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115895642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, Y chromosome, family 1 member F/J-like isoform X1
translation: MVEVDCPGKLYIGGLNRETNEKMLKAVFVKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQAKKPSFQSGGRRRPPPSSRNRSPSGSLRSAKGSSRGIRGWLPSHEGHLDDGGYTLDLNMSSSRGAIPVKRGPSSRSGGPLPKISALSAMARSNSWIGSQGPMSRGRENYGSPPCREPTSSWRNDHMSRRDDGYATKERTHQSSRDTRDYAPLSRVYTYRDYGRSSPDENSSRGYRNHPSSRETRDYAPPPKDYTYPDYGRCSPDEHSSRGYRNRPSSRETRDFALPPKDYTYPDYGRCSPDEHSSRGYRNHPSSRETRDYALPPKDYTYPAYGRSSRDEHSSRGYSDPDGYSAARGRDHSEGPSGSSYRDAFQGYGTSHGAPPARGPRMSYGGSTCRDYNTRDGYGRRWESYSRSCGDSYSCGREHAGRKDQRNLPSLDRLLPAPREAYGSSSYVSSTVDGDESRSEKET
SIO_010081: LOC115895642
subclass of: SO_0000673
so part of: LOC115895642
location: join(7002658..7002766,7003235..7003338,7006324..7006501,7008415..7008567,7010550..7010664,7011606..7011716,7012079..7012189,7012555..7012665,7013507..7013617,7013716..7013804,7014209..7014495)
location: region:7002658-7014495:1
so has part: feature:7002658-7002766:1:exon
so has part: feature:7003235-7003338:1:exon
so has part: feature:7006324-7006501:1:exon
so has part: feature:7008415-7008567:1:exon
so has part: feature:7010550-7010664:1:exon
so has part: feature:7011606-7011716:1:exon
so has part: feature:7012079-7012189:1:exon
so has part: feature:7012555-7012665:1:exon
so has part: feature:7013507-7013617:1:exon
so has part: feature:7013716-7013804:1:exon
so has part: feature:7014209-7014495:1:exon

XP_030782135.1
type: Protein
SIO_000068: ncbiprotein

position:7014495:1
position: 7014495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7002658-7002766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7003235-7003338:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7006324-7006501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7008415-7008567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7010550-7010664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7011606-7011716:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7012079-7012189:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7012555-7012665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7013507-7013617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7013716-7013804:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7014209-7014495:1:exon

LOC115895642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895642
product: RNA-binding motif protein, Y chromosome, family 1 member F/J-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins
transcript id: XM_030926276.1
SIO_010081: LOC115895642
subclass of: SO_0000673
so part of: LOC115895642
location: join(7002658..7002766,7003235..7003338,7006324..7006501,7008415..7008567,7010550..7010664,7011606..7011716,7012079..7012189,7012555..7012665,7013507..7013617,7013716..7013797,7014207..7014275)
location: region:7002658-7014275:1
so has part: feature:7002658-7002766:1:exon
so has part: feature:7003235-7003338:1:exon
so has part: feature:7006324-7006501:1:exon
so has part: feature:7008415-7008567:1:exon
so has part: feature:7010550-7010664:1:exon
so has part: feature:7011606-7011716:1:exon
so has part: feature:7012079-7012189:1:exon
so has part: feature:7012555-7012665:1:exon
so has part: feature:7013507-7013617:1:exon
so has part: feature:7013716-7013797:1:exon
so has part: feature:7014207-7014275:1:exon

position:7014275:1
position: 7014275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7002658-7002766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7003235-7003338:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7006324-7006501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7008415-7008567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7010550-7010664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7011606-7011716:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7012079-7012189:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7012555-7012665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7013507-7013617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7013716-7013797:1:exon

position:7013797:1
position: 7013797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7014207-7014275:1:exon

position:7014207:1
position: 7014207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115895642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, Y chromosome, family 1 member A1-like isoform X2
translation: MVEVDCPGKLYIGGLNRETNEKMLKAVFVKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLDGKAIKVEQAKKPSFQSGGRRRPPPSSRNRSPSGSLRSAKGSSRGIRGWLPSHEGHLDDGGYTLDLNMSSSRGAIPVKRGPSSRSGGPLPKISALSAMARSNSWIGSQGPMSRGRENYGSPPCREPTSSWRNDHMSRRDDGYATKERTHQSSRDTRDYAPLSRVYTYRDYGRSSPDENSSRGYRNHPSSRETRDYAPPPKDYTYPDYGRCSPDEHSSRGYRNRPSSRETRDFALPPKDYTYPDYGRCSPDEHSSRGYRNHPSSRETRDYALPPKDYTYPAYGRSSRDEHSSRGYSDPDGYSAARGRDHSEGPSGSSYRDAFQRDLSWCTTCTRASDVLWWKHLP
SIO_010081: LOC115895642
subclass of: SO_0000673
so part of: LOC115895642
location: join(7002658..7002766,7003235..7003338,7006324..7006501,7008415..7008567,7010550..7010664,7011606..7011716,7012079..7012189,7012555..7012665,7013507..7013617,7013716..7013797,7014207..7014275)
location: region:7002658-7014275:1
so has part: feature:7002658-7002766:1:exon
so has part: feature:7003235-7003338:1:exon
so has part: feature:7006324-7006501:1:exon
so has part: feature:7008415-7008567:1:exon
so has part: feature:7010550-7010664:1:exon
so has part: feature:7011606-7011716:1:exon
so has part: feature:7012079-7012189:1:exon
so has part: feature:7012555-7012665:1:exon
so has part: feature:7013507-7013617:1:exon
so has part: feature:7013716-7013797:1:exon
so has part: feature:7014207-7014275:1:exon

XP_030782136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7002658-7002766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7003235-7003338:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7006324-7006501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7008415-7008567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7010550-7010664:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7011606-7011716:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7012079-7012189:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7012555-7012665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7013507-7013617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7013716-7013797:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7014207-7014275:1:exon

LOC115895655
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7174700..7181296
location: region:7174700-7181296:1
so has part: feature:7174700-7181296:1:exon
subclass of: SO_0000010

115895655
type: Gene
SIO_000068: ncbigene

position:7174700:1
position: 7174700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7181296:1
position: 7181296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7174700-7181296:1:exon

LOC115895655
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895655
product: ATP-dependent RNA helicase DDX42-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_030926310.1
SIO_010081: LOC115895655
subclass of: SO_0000673
so part of: LOC115895655
location: join(7174700..7175677,7180641..7181296)
location: region:7174700-7181296:1
so has part: feature:7174700-7175677:1:exon
so has part: feature:7180641-7181296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7174700-7175677:1:exon

position:7175677:1
position: 7175677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7180641-7181296:1:exon

position:7180641:1
position: 7180641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115895655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895655
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX42-like
translation: MSDGEDPSGAEGRRRATESDGERRRATESDEGRRCLMEKIQEELKGGGERRRVTESDGERRRVTESDEGRRCLTEKIQVELKGGGERRRVTESDGERRRVTESDEGRRCLTEKIQVELKGGGERRRVTESDGERRRATETDESRRCLTRRAERT
SIO_010081: LOC115895655
subclass of: SO_0000673
so part of: LOC115895655
location: 7174967..7175431
location: region:7174967-7175431:1
so has part: feature:7174967-7175431:1:exon

XP_030782170.1
type: Protein
SIO_000068: ncbiprotein

position:7174967:1
position: 7174967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7175431:1
position: 7175431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7174967-7175431:1:exon

LOC115895676
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7184762..7189362)
location: region:7184762-7189362:-1
so has part: feature:7184762-7189362:-1:exon
subclass of: SO_0000010

115895676
type: Gene
SIO_000068: ncbigene

position:7184762:-1
position: 7184762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7189362:-1
position: 7189362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7184762-7189362:-1:exon

LOC115895676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895676
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926330.1
SIO_010081: LOC115895676
subclass of: SO_0000673
so part of: LOC115895676
location: complement(join(7184762..7185065,7186265..7186402,7188762..7189083,7189285..7189362))
location: region:7184762-7189362:-1
so has part: feature:7189285-7189362:-1:exon
so has part: feature:7188762-7189083:-1:exon
so has part: feature:7186265-7186402:-1:exon
so has part: feature:7184762-7185065:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7189285-7189362:-1:exon

position:7189285:-1
position: 7189285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7188762-7189083:-1:exon

position:7188762:-1
position: 7188762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7189083:-1
position: 7189083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7186265-7186402:-1:exon

position:7186265:-1
position: 7186265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7186402:-1
position: 7186402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7184762-7185065:-1:exon

position:7185065:-1
position: 7185065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115895676
translation: MTNEEHALYRGVALGSPPRPHANQQHPRPTSQPPDKPCGPCGPPYARDCGSPAWAVASRLRGQPRRPAPRARSPLSAAGAPGIWRGHGAEAGSAGGRRPMPRGRRRGGAGRCGREGGGGAAAGRASAAGGDAAPEWQVAEATALVHTLDGWSVVQTMVVSTKSPDRKLIFGKGNFQHLTERTGSRVEVFDRFTVLHISGATSA
SIO_010081: LOC115895676
subclass of: SO_0000673
so part of: LOC115895676
location: complement(join(7184992..7185065,7186265..7186402,7188762..7189083,7189285..7189362))
location: region:7184992-7189362:-1
so has part: feature:7189285-7189362:-1:exon
so has part: feature:7188762-7189083:-1:exon
so has part: feature:7186265-7186402:-1:exon
so has part: feature:7184992-7185065:-1:exon

XP_030782190.1
type: Protein
SIO_000068: ncbiprotein

position:7184992:-1
position: 7184992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7189285-7189362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7188762-7189083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7186265-7186402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7184992-7185065:-1:exon

PPP2R3B
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: PPP2R3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7203837..7242316)
location: region:7203837-7242316:-1
so has part: feature:7203837-7242316:-1:exon
subclass of: SO_0000010

104663356
type: Gene
SIO_000068: ncbigene

position:7203837:-1
position: 7203837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7242316:-1
position: 7242316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7203837-7242316:-1:exon

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: PPP2R3B
product: protein phosphatase 2 regulatory subunit B''beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 53 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030926281.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(7203837..7204120,7206410..7206516,7206597..7206715,7208291..7208466,7209897..7209986,7210451..7210499,7211934..7212090,7212581..7212667,7212921..7212995,7213229..7213331,7213534..7213637,7223965..7224150,7241530..7242316))
location: region:7203837-7242316:-1
so has part: feature:7241530-7242316:-1:exon
so has part: feature:7223965-7224150:-1:exon
so has part: feature:7213534-7213637:-1:exon
so has part: feature:7213229-7213331:-1:exon
so has part: feature:7212921-7212995:-1:exon
so has part: feature:7212581-7212667:-1:exon
so has part: feature:7211934-7212090:-1:exon
so has part: feature:7210451-7210499:-1:exon
so has part: feature:7209897-7209986:-1:exon
so has part: feature:7208291-7208466:-1:exon
so has part: feature:7206597-7206715:-1:exon
so has part: feature:7206410-7206516:-1:exon
so has part: feature:7203837-7204120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7241530-7242316:-1:exon

position:7241530:-1
position: 7241530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7223965-7224150:-1:exon

position:7223965:-1
position: 7223965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7224150:-1
position: 7224150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7213534-7213637:-1:exon

position:7213534:-1
position: 7213534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7213637:-1
position: 7213637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7213229-7213331:-1:exon

position:7213229:-1
position: 7213229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7213331:-1
position: 7213331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7212921-7212995:-1:exon

position:7212921:-1
position: 7212921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7212995:-1
position: 7212995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7212581-7212667:-1:exon

position:7212581:-1
position: 7212581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7212667:-1
position: 7212667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7211934-7212090:-1:exon

position:7211934:-1
position: 7211934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7212090:-1
position: 7212090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7210451-7210499:-1:exon

position:7210451:-1
position: 7210451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7210499:-1
position: 7210499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7209897-7209986:-1:exon

position:7209897:-1
position: 7209897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7209986:-1
position: 7209986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7208291-7208466:-1:exon

position:7208291:-1
position: 7208291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7208466:-1
position: 7208466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7206597-7206715:-1:exon

position:7206597:-1
position: 7206597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7206715:-1
position: 7206715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7206410-7206516:-1:exon

position:7206410:-1
position: 7206410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7206516:-1
position: 7206516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7203837-7204120:-1:exon

position:7204120:-1
position: 7204120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: PPP2R3B
product: protein phosphatase 2 regulatory subunit B''beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030926282.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(7203837..7204120,7206410..7206516,7206597..7206715,7208291..7208466,7209897..7209986,7210451..7210499,7211934..7212090,7212581..7212667,7212921..7212995,7213229..7213331,7213534..7213637,7223965..7224150,7232698..7233190))
location: region:7203837-7233190:-1
so has part: feature:7232698-7233190:-1:exon
so has part: feature:7223965-7224150:-1:exon
so has part: feature:7213534-7213637:-1:exon
so has part: feature:7213229-7213331:-1:exon
so has part: feature:7212921-7212995:-1:exon
so has part: feature:7212581-7212667:-1:exon
so has part: feature:7211934-7212090:-1:exon
so has part: feature:7210451-7210499:-1:exon
so has part: feature:7209897-7209986:-1:exon
so has part: feature:7208291-7208466:-1:exon
so has part: feature:7206597-7206715:-1:exon
so has part: feature:7206410-7206516:-1:exon
so has part: feature:7203837-7204120:-1:exon

position:7233190:-1
position: 7233190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7232698-7233190:-1:exon

position:7232698:-1
position: 7232698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7223965-7224150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7213534-7213637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7213229-7213331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7212921-7212995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7212581-7212667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7211934-7212090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7210451-7210499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7209897-7209986:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7208291-7208466:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7206597-7206715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7206410-7206516:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7203837-7204120:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: PPP2R3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1
translation: MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIQAPGRDLPTAGDAELPGVWPAAPLAATPRPGGLDLAATPGPGPALPLGAACSPRNAPHARGTRRSAGTRVVQTRKEEPLPPATSQSIPTFYFPRGRPQDSLNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDLVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYTVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDAHDLARHNDHAISTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLASVFFDTFFNIEKYLDHEQKEQISLLRDSDSSGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALPSPLVQRPFFEAPAPLGAVDLYEYARGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(7203970..7204120,7206410..7206516,7206597..7206715,7208291..7208466,7209897..7209986,7210451..7210499,7211934..7212090,7212581..7212667,7212921..7212995,7213229..7213331,7213534..7213637,7223965..7224150,7241530..7241856))
location: region:7203970-7241856:-1
so has part: feature:7241530-7241856:-1:exon
so has part: feature:7223965-7224150:-1:exon
so has part: feature:7213534-7213637:-1:exon
so has part: feature:7213229-7213331:-1:exon
so has part: feature:7212921-7212995:-1:exon
so has part: feature:7212581-7212667:-1:exon
so has part: feature:7211934-7212090:-1:exon
so has part: feature:7210451-7210499:-1:exon
so has part: feature:7209897-7209986:-1:exon
so has part: feature:7208291-7208466:-1:exon
so has part: feature:7206597-7206715:-1:exon
so has part: feature:7206410-7206516:-1:exon
so has part: feature:7203970-7204120:-1:exon

XP_030782141.1
type: Protein
SIO_000068: ncbiprotein

position:7203970:-1
position: 7203970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7241856:-1
position: 7241856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7241530-7241856:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7223965-7224150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7213534-7213637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7213229-7213331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7212921-7212995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7212581-7212667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7211934-7212090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7210451-7210499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7209897-7209986:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7208291-7208466:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7206597-7206715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7206410-7206516:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7203970-7204120:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: PPP2R3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2
translation: MERAEPGPRLQRPAGPGPALPRERSARPGPRRALRADGMRLRERSLRQDPDLRQELASLARGCDFVLPSRFKKRLKAFQQVQTRKEEPLPPATSQSIPTFYFPRGRPQDSLNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDLVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYTVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDAHDLARHNDHAISTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLASVFFDTFFNIEKYLDHEQKEQISLLRDSDSSGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALPSPLVQRPFFEAPAPLGAVDLYEYARGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(7203970..7204120,7206410..7206516,7206597..7206715,7208291..7208466,7209897..7209986,7210451..7210499,7211934..7212090,7212581..7212667,7212921..7212995,7213229..7213331,7213534..7213637,7223965..7224150,7232698..7232937))
location: region:7203970-7232937:-1
so has part: feature:7232698-7232937:-1:exon
so has part: feature:7223965-7224150:-1:exon
so has part: feature:7213534-7213637:-1:exon
so has part: feature:7213229-7213331:-1:exon
so has part: feature:7212921-7212995:-1:exon
so has part: feature:7212581-7212667:-1:exon
so has part: feature:7211934-7212090:-1:exon
so has part: feature:7210451-7210499:-1:exon
so has part: feature:7209897-7209986:-1:exon
so has part: feature:7208291-7208466:-1:exon
so has part: feature:7206597-7206715:-1:exon
so has part: feature:7206410-7206516:-1:exon
so has part: feature:7203970-7204120:-1:exon

XP_030782142.1
type: Protein
SIO_000068: ncbiprotein

position:7232937:-1
position: 7232937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7232698-7232937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7223965-7224150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7213534-7213637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7213229-7213331:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7212921-7212995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7212581-7212667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7211934-7212090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7210451-7210499:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7209897-7209986:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7208291-7208466:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7206597-7206715:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7206410-7206516:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7203970-7204120:-1:exon

DHRSX
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: DHRSX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7273903..7567647)
location: region:7273903-7567647:-1
so has part: feature:7273903-7567647:-1:exon
subclass of: SO_0000010

104663358
type: Gene
SIO_000068: ncbigene

position:7273903:-1
position: 7273903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7567647:-1
position: 7567647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7273903-7567647:-1:exon

DHRSX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: DHRSX
product: dehydrogenase/reductase X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030926232.1
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(7273903..7274372,7292638..7292845,7297761..7297958,7314966..7315173,7334442..7334543,7463404..7463472,7479278..7479385,7495468..7495567))
location: region:7273903-7495567:-1
so has part: feature:7495468-7495567:-1:exon
so has part: feature:7479278-7479385:-1:exon
so has part: feature:7463404-7463472:-1:exon
so has part: feature:7334442-7334543:-1:exon
so has part: feature:7314966-7315173:-1:exon
so has part: feature:7297761-7297958:-1:exon
so has part: feature:7292638-7292845:-1:exon
so has part: feature:7273903-7274372:-1:exon

position:7495567:-1
position: 7495567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7495468-7495567:-1:exon

position:7495468:-1
position: 7495468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7479278-7479385:-1:exon

position:7479278:-1
position: 7479278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7479385:-1
position: 7479385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7463404-7463472:-1:exon

position:7463404:-1
position: 7463404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7463472:-1
position: 7463472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7334442-7334543:-1:exon

position:7334442:-1
position: 7334442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7334543:-1
position: 7334543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7314966-7315173:-1:exon

position:7314966:-1
position: 7314966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7315173:-1
position: 7315173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7297761-7297958:-1:exon

position:7297761:-1
position: 7297761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7297958:-1
position: 7297958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7292638-7292845:-1:exon

position:7292638:-1
position: 7292638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7292845:-1
position: 7292845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7273903-7274372:-1:exon

position:7274372:-1
position: 7274372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHRSX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: DHRSX
product: dehydrogenase/reductase X-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 157 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_030926231.1
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(7273907..7274372,7292638..7292845,7314966..7315173,7334442..7334543,7463404..7463472,7479278..7479385,7567532..7567647))
location: region:7273907-7567647:-1
so has part: feature:7567532-7567647:-1:exon
so has part: feature:7479278-7479385:-1:exon
so has part: feature:7463404-7463472:-1:exon
so has part: feature:7334442-7334543:-1:exon
so has part: feature:7314966-7315173:-1:exon
so has part: feature:7292638-7292845:-1:exon
so has part: feature:7273907-7274372:-1:exon

position:7273907:-1
position: 7273907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7567532-7567647:-1:exon

position:7567532:-1
position: 7567532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7479278-7479385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7463404-7463472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7334442-7334543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7314966-7315173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7292638-7292845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7273907-7274372:-1:exon

DHRSX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: DHRSX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member on chromosome X isoform X1
translation: MSPLSAARAALRVYAAGAAVILAQLLRRCCGGFLEPGFPRQPDRVAIVTGGTDGIGYSTAKHLARLGMHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYCDLASMMSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNLLLDTLRESGSPGHSARVVTVSSATHYVAELNMDDLQSSACYSAHAAYAQSKLALVLFTYHLQRLLAAEGSHVTANVVDPGVVDTDLYRHVFWGTRLVKKLFSWLLFKTPDEGAWTSIYAAVTPELEGVGGRYLYNEKETKSLHVTYNQKLQQQLWSTSCDMTGVRDVTL
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(7274184..7274372,7292638..7292845,7314966..7315173,7334442..7334543,7463404..7463472,7479278..7479385,7567532..7567640))
location: region:7274184-7567640:-1
so has part: feature:7567532-7567640:-1:exon
so has part: feature:7479278-7479385:-1:exon
so has part: feature:7463404-7463472:-1:exon
so has part: feature:7334442-7334543:-1:exon
so has part: feature:7314966-7315173:-1:exon
so has part: feature:7292638-7292845:-1:exon
so has part: feature:7274184-7274372:-1:exon

XP_030782091.1
type: Protein
SIO_000068: ncbiprotein

position:7274184:-1
position: 7274184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7567640:-1
position: 7567640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7567532-7567640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7479278-7479385:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7463404-7463472:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7334442-7334543:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7314966-7315173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7292638-7292845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7274184-7274372:-1:exon

DHRSX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: DHRSX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrogenase/reductase SDR family member on chromosome X isoform X2
translation: MHVIIAGNNDSKAKQVVSKIKEETLNDKVEFLYCDLASMMSIRQFVQKFKMKKIPLHVLINNAGVMMVPQRKTRDGFEEHFGLNYLGHFLLTNLLLDTLRESGSPGHSARVVTVSSATHYVAELNMDDLQSRPNVRLWRAAFCYPRLPDETAAGGRTESLEGFNEGVTAPPASNSHMPFGQREGASQKISAQVAIPPGACYSAHAAYAQSKLALVLFTYHLQRLLAAEGSHVTANVVDPGVVDTDLYRHVFWGTRLVKKLFSWLLFKTPDEGAWTSIYAAVTPELEGVGGRYLYNEKETKSLHVTYNQKLQQQLWSTSCDMTGVRDVTL
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(7274184..7274372,7292638..7292845,7297761..7297958,7314966..7315173,7334442..7334543,7463404..7463472,7479278..7479293))
location: region:7274184-7479293:-1
so has part: feature:7479278-7479293:-1:exon
so has part: feature:7463404-7463472:-1:exon
so has part: feature:7334442-7334543:-1:exon
so has part: feature:7314966-7315173:-1:exon
so has part: feature:7297761-7297958:-1:exon
so has part: feature:7292638-7292845:-1:exon
so has part: feature:7274184-7274372:-1:exon

XP_030782092.1
type: Protein
SIO_000068: ncbiprotein

position:7479293:-1
position: 7479293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7479278-7479293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7463404-7463472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7334442-7334543:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7314966-7315173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7297761-7297958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7292638-7292845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7274184-7274372:-1:exon

ZBED1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: ZBED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7553035..7567691)
location: region:7553035-7567691:-1
so has part: feature:7553035-7567691:-1:exon
subclass of: SO_0000010

104663352
type: Gene
SIO_000068: ncbigene

position:7553035:-1
position: 7553035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7567691:-1
position: 7567691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7553035-7567691:-1:exon

ZBED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ZBED1
product: zinc finger BED-type containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 171 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_030926230.1
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(join(7553035..7557384,7567532..7567691))
location: region:7553035-7567691:-1
so has part: feature:7567532-7567691:-1:exon
so has part: feature:7553035-7557384:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7567532-7567691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553035-7557384:-1:exon

position:7557384:-1
position: 7557384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ZBED1
product: zinc finger BED-type containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 183 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_030926229.1
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(join(7553035..7557387,7567532..7567691))
location: region:7553035-7567691:-1
so has part: feature:7567532-7567691:-1:exon
so has part: feature:7553035-7557387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7567532-7567691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7553035-7557387:-1:exon

position:7557387:-1
position: 7557387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ZBED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein 1
translation: MENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGYDSKKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAVREVILKELVEATWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSVGSRCLKTFEVPEENTAETITRVLYEVFIEWGISAKVFGATTNYSKDIVKACSLLDIAVHMPCLGHTFNAGIQQAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNMAHCMLVSNRVSWWGSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTISMVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATFLDPRYKRLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKVFPVPEEPPVKKLMRTSTPPPSSVINNMLAEIFCQTGGMEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFPLLPKVLQKYWCVTATRVAPERLFGSATNVVSAKRNRLAPAHVDEQVFLYENARSGAEAEPEDQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSGFL
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(7555249..7557333)
location: region:7555249-7557333:-1
so has part: feature:7555249-7557333:-1:exon

XP_030782089.1
type: Protein
SIO_000068: ncbiprotein

position:7555249:-1
position: 7555249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7557333:-1
position: 7557333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7555249-7557333:-1:exon

ZBED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ZBED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein 1
translation: MENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGYDSKKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAVREVILKELVEATWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSVGSRCLKTFEVPEENTAETITRVLYEVFIEWGISAKVFGATTNYSKDIVKACSLLDIAVHMPCLGHTFNAGIQQAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNMAHCMLVSNRVSWWGSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTISMVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATFLDPRYKRLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKVFPVPEEPPVKKLMRTSTPPPSSVINNMLAEIFCQTGGMEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFPLLPKVLQKYWCVTATRVAPERLFGSATNVVSAKRNRLAPAHVDEQVFLYENARSGAEAEPEDQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSGFL
SIO_010081: ZBED1
subclass of: SO_0000673
so part of: ZBED1
location: complement(7555249..7557333)
location: region:7555249-7557333:-1
so has part: feature:7555249-7557333:-1:exon

XP_030782090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7555249-7557333:-1:exon

LOC115895635
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7638300..7684976)
location: region:7638300-7684976:-1
so has part: feature:7638300-7684976:-1:exon
subclass of: SO_0000010

115895635
type: Gene
SIO_000068: ncbigene

position:7638300:-1
position: 7638300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7684976:-1
position: 7684976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7638300-7684976:-1:exon

LOC115895635
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC115895635
product: translation initiation factor IF-2-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 28 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004055810.1
SIO_010081: LOC115895635
so part of: LOC115895635
location: complement(join(7638300..7639568,7668265..7668396,7683264..7683382,7684871..7684976))
location: region:7638300-7684976:-1
so has part: feature:7684871-7684976:-1:exon
so has part: feature:7683264-7683382:-1:exon
so has part: feature:7668265-7668396:-1:exon
so has part: feature:7638300-7639568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7684871-7684976:-1:exon

position:7684871:-1
position: 7684871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7683264-7683382:-1:exon

position:7683264:-1
position: 7683264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7683382:-1
position: 7683382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7668265-7668396:-1:exon

position:7668265:-1
position: 7668265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7668396:-1
position: 7668396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7638300-7639568:-1:exon

position:7639568:-1
position: 7639568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895635
product: translation initiation factor IF-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 30 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926233.1
SIO_010081: LOC115895635
subclass of: SO_0000673
so part of: LOC115895635
location: complement(join(7638300..7639568,7656425..7657843,7658177..7658389,7668265..7668396,7683264..7683382,7684871..7684976))
location: region:7638300-7684976:-1
so has part: feature:7684871-7684976:-1:exon
so has part: feature:7683264-7683382:-1:exon
so has part: feature:7668265-7668396:-1:exon
so has part: feature:7658177-7658389:-1:exon
so has part: feature:7656425-7657843:-1:exon
so has part: feature:7638300-7639568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7684871-7684976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7683264-7683382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7668265-7668396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7658177-7658389:-1:exon

position:7658177:-1
position: 7658177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7658389:-1
position: 7658389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7656425-7657843:-1:exon

position:7656425:-1
position: 7656425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7657843:-1
position: 7657843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7638300-7639568:-1:exon

LOC115895635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895635
product: translation initiation factor IF-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926234.1
SIO_010081: LOC115895635
subclass of: SO_0000673
so part of: LOC115895635
location: complement(join(7638300..7639568,7656425..7658389,7668265..7668396,7683264..7683382,7684532..7684688))
location: region:7638300-7684688:-1
so has part: feature:7684532-7684688:-1:exon
so has part: feature:7683264-7683382:-1:exon
so has part: feature:7668265-7668396:-1:exon
so has part: feature:7656425-7658389:-1:exon
so has part: feature:7638300-7639568:-1:exon

position:7684688:-1
position: 7684688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7684532-7684688:-1:exon

position:7684532:-1
position: 7684532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7683264-7683382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7668265-7668396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7656425-7658389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7638300-7639568:-1:exon

LOC115895635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895635
product: translation initiation factor IF-2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926236.1
SIO_010081: LOC115895635
subclass of: SO_0000673
so part of: LOC115895635
location: complement(join(7638300..7639568,7656425..7658389,7658502..7659369))
location: region:7638300-7659369:-1
so has part: feature:7658502-7659369:-1:exon
so has part: feature:7656425-7658389:-1:exon
so has part: feature:7638300-7639568:-1:exon

position:7659369:-1
position: 7659369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7658502-7659369:-1:exon

position:7658502:-1
position: 7658502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7656425-7658389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7638300-7639568:-1:exon

LOC115895635
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895635
product: translation initiation factor IF-2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030926235.1
SIO_010081: LOC115895635
subclass of: SO_0000673
so part of: LOC115895635
location: complement(join(7638300..7639568,7656425..7659369))
location: region:7638300-7659369:-1
so has part: feature:7656425-7659369:-1:exon
so has part: feature:7638300-7639568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7656425-7659369:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7638300-7639568:-1:exon

LOC115895635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115895635
translation: MRETSTAALERGDWGKQRGGRGDGEARSRGRLLSPHPPHLQREAPRPAPQPLPARSPPRLPPAPPAARGRQRAAARGAGVSTCHRGAAAAPSFRGTCPARRLPPALPHGRRPLFPAAPRGPRAPRPAPRPPGPVSTSSWGDPDGGCPARSRLHPSAPASEQPPLPPPPPPSSHPGSVCPGHGALRMRRGAGAGLRARSGVVSAAPRAPARPAPSRAPRWGHAVSHLSGDQGDPGGPLHLRHPPHPLCDPVVHLPRCGLRPWHLSAVDPRGRHTGGNRSARAMGTEPSRGAPQLGARAPYSGPRRPPCTSTASWP
SIO_010081: LOC115895635
subclass of: SO_0000673
so part of: LOC115895635
location: complement(7656452..7657396)
location: region:7656452-7657396:-1
so has part: feature:7656452-7657396:-1:exon

XP_030782093.1
type: Protein
SIO_000068: ncbiprotein

position:7656452:-1
position: 7656452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7657396:-1
position: 7657396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7656452-7657396:-1:exon

LOC115895635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115895635
translation: MRETSTAALERGDWGKQRGGRGDGEARSRGRLLSPHPPHLQREAPRPAPQPLPARSPPRLPPAPPAARGRQRAAARGAGVSTCHRGAAAAPSFRGTCPARRLPPALPHGRRPLFPAAPRGPRAPRPAPRPPGPVSTSSWGDPDGGCPARSRLHPSAPASEQPPLPPPPPPSSHPGSVCPGHGALRMRRGAGAGLRARSGVVSAAPRAPARPAPSRAPRWGHAVSHLSGDQGDPGGPLHLRHPPHPLCDPVVHLPRCGLRPWHLSAVDPRGRHTGGNRSARAMGTEPSRGAPQLGARAPYSGPRRPPCTSTASWP
SIO_010081: LOC115895635
subclass of: SO_0000673
so part of: LOC115895635
location: complement(7656452..7657396)
location: region:7656452-7657396:-1
so has part: feature:7656452-7657396:-1:exon

XP_030782094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7656452-7657396:-1:exon

LOC115895635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115895635
translation: MRETSTAALERGDWGKQRGGRGDGEARSRGRLLSPHPPHLQREAPRPAPQPLPARSPPRLPPAPPAARGRQRAAARGAGVSTCHRGAAAAPSFRGTCPARRLPPALPHGRRPLFPAAPRGPRAPRPAPRPPGPVSTSSWGDPDGGCPARSRLHPSAPASEQPPLPPPPPPSSHPGSVCPGHGALRMRRGAGAGLRARSGVVSAAPRAPARPAPSRAPRWGHAVSHLSGDQGDPGGPLHLRHPPHPLCDPVVHLPRCGLRPWHLSAVDPRGRHTGGNRSARAMGTEPSRGAPQLGARAPYSGPRRPPCTSTASWP
SIO_010081: LOC115895635
subclass of: SO_0000673
so part of: LOC115895635
location: complement(7656452..7657396)
location: region:7656452-7657396:-1
so has part: feature:7656452-7657396:-1:exon

XP_030782095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7656452-7657396:-1:exon

LOC115895635
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895635
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115895635
translation: MRETSTAALERGDWGKQRGGRGDGEARSRGRLLSPHPPHLQREAPRPAPQPLPARSPPRLPPAPPAARGRQRAAARGAGVSTCHRGAAAAPSFRGTCPARRLPPALPHGRRPLFPAAPRGPRAPRPAPRPPGPVSTSSWGDPDGGCPARSRLHPSAPASEQPPLPPPPPPSSHPGSVCPGHGALRMRRGAGAGLRARSGVVSAAPRAPARPAPSRAPRWGHAVSHLSGDQGDPGGPLHLRHPPHPLCDPVVHLPRCGLRPWHLSAVDPRGRHTGGNRSARAMGTEPSRGAPQLGARAPYSGPRRPPCTSTASWP
SIO_010081: LOC115895635
subclass of: SO_0000673
so part of: LOC115895635
location: complement(7656452..7657396)
location: region:7656452-7657396:-1
so has part: feature:7656452-7657396:-1:exon

XP_030782096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7656452-7657396:-1:exon

LOC115895635
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC115895635
product: translation initiation factor IF-2-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004055811.1
SIO_010081: LOC115895635
so part of: LOC115895635
location: complement(join(7675782..7675842,7683264..7683382,7684871..7684976))
location: region:7675782-7684976:-1
so has part: feature:7684871-7684976:-1:exon
so has part: feature:7683264-7683382:-1:exon
so has part: feature:7675782-7675842:-1:exon

position:7675782:-1
position: 7675782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7684871-7684976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7683264-7683382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7675782-7675842:-1:exon

position:7675842:-1
position: 7675842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104663353
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104663353
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7693219..7695567)
location: region:7693219-7695567:-1
so has part: feature:7693219-7695567:-1:exon
subclass of: SO_0000011

104663353
type: Gene
SIO_000068: ncbigene

position:7693219:-1
position: 7693219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7695567:-1
position: 7695567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693219-7695567:-1:exon

LOC104663353
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC104663353
product: uncharacterized LOC104663353
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs
transcript id: XR_748127.2
SIO_010081: LOC104663353
subclass of: SO_0000673
so part of: LOC104663353
location: complement(join(7693219..7693904,7694944..7695567))
location: region:7693219-7695567:-1
so has part: feature:7694944-7695567:-1:exon
so has part: feature:7693219-7693904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7694944-7695567:-1:exon

position:7694944:-1
position: 7694944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7693219-7693904:-1:exon

position:7693904:-1
position: 7693904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104667031
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104667031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7758832..7759347
location: region:7758832-7759347:1
so has part: feature:7758832-7759347:1:exon
subclass of: SO_0000010

104667031
type: Gene
SIO_000068: ncbigene

position:7758832:1
position: 7758832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7759347:1
position: 7759347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7758832-7759347:1:exon

LOC104667031
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104667031
product: 60S ribosomal protein L26-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94 ESTs, 32 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010369197.2
SIO_010081: LOC104667031
subclass of: SO_0000673
so part of: LOC104667031
location: 7758832..7759347
location: region:7758832-7759347:1
so has part: feature:7758832-7759347:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7758832-7759347:1:exon

LOC104667031
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104667031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L26-like
translation: MLKTKLSPFVAITEAGAAKMKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYTERVQREKANGTTVHIGIHPSKVVITRLKLDKDRKKILERKATSHQVGKEKGKYKEETIEKMQE
SIO_010081: LOC104667031
subclass of: SO_0000673
so part of: LOC104667031
location: 7758853..7759347
location: region:7758853-7759347:1
so has part: feature:7758853-7759347:1:exon

XP_010367499.2
type: Protein
SIO_000068: ncbiprotein

position:7758853:1
position: 7758853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7758853-7759347:1:exon

CD99
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: CD99
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7771106..7820640
location: region:7771106-7820640:1
so has part: feature:7771106-7820640:1:exon
subclass of: SO_0000010

104667030
type: Gene
SIO_000068: ncbigene

position:7771106:1
position: 7771106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7820640:1
position: 7820640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7771106-7820640:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CD99
product: CD99 molecule (Xg blood group), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 611 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010369193.2
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(7771106..7771341,7792699..7792731,7795712..7795759,7797432..7797476,7798125..7798193,7800380..7800427,7801184..7801234,7804661..7804774,7817550..7817606,7820103..7820640)
location: region:7771106-7820640:1
so has part: feature:7771106-7771341:1:exon
so has part: feature:7792699-7792731:1:exon
so has part: feature:7795712-7795759:1:exon
so has part: feature:7797432-7797476:1:exon
so has part: feature:7798125-7798193:1:exon
so has part: feature:7800380-7800427:1:exon
so has part: feature:7801184-7801234:1:exon
so has part: feature:7804661-7804774:1:exon
so has part: feature:7817550-7817606:1:exon
so has part: feature:7820103-7820640:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7771106-7771341:1:exon

position:7771341:1
position: 7771341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7792699-7792731:1:exon

position:7792699:1
position: 7792699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7792731:1
position: 7792731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7795712-7795759:1:exon

position:7795712:1
position: 7795712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7795759:1
position: 7795759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7797432-7797476:1:exon

position:7797432:1
position: 7797432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7797476:1
position: 7797476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7798125-7798193:1:exon

position:7798125:1
position: 7798125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7798193:1
position: 7798193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7800380-7800427:1:exon

position:7800380:1
position: 7800380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7800427:1
position: 7800427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7801184-7801234:1:exon

position:7801184:1
position: 7801184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7801234:1
position: 7801234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7804661-7804774:1:exon

position:7804661:1
position: 7804661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7804774:1
position: 7804774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7817550-7817606:1:exon

position:7817550:1
position: 7817550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7817606:1
position: 7817606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7820103-7820640:1:exon

position:7820103:1
position: 7820103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CD99
product: CD99 molecule (Xg blood group), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 432 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010369195.2
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(7771109..7771341,7792699..7792731,7795712..7795759,7797432..7797476,7798125..7798193,7800380..7800427,7801184..7801234,7804661..7804774,7817553..7817606,7820103..7820640)
location: region:7771109-7820640:1
so has part: feature:7771109-7771341:1:exon
so has part: feature:7792699-7792731:1:exon
so has part: feature:7795712-7795759:1:exon
so has part: feature:7797432-7797476:1:exon
so has part: feature:7798125-7798193:1:exon
so has part: feature:7800380-7800427:1:exon
so has part: feature:7801184-7801234:1:exon
so has part: feature:7804661-7804774:1:exon
so has part: feature:7817553-7817606:1:exon
so has part: feature:7820103-7820640:1:exon

position:7771109:1
position: 7771109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7771109-7771341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7792699-7792731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7795712-7795759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7797432-7797476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7798125-7798193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7800380-7800427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7801184-7801234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7804661-7804774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7817553-7817606:1:exon

position:7817553:1
position: 7817553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7820103-7820640:1:exon

CD99
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CD99
product: CD99 molecule (Xg blood group), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010369196.2
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(7771109..7771341,7792699..7792731,7795712..7795759,7797432..7797476,7798125..7798193,7800380..7800427,7801184..7801234,7804661..7804774,7812094..7812706)
location: region:7771109-7812706:1
so has part: feature:7771109-7771341:1:exon
so has part: feature:7792699-7792731:1:exon
so has part: feature:7795712-7795759:1:exon
so has part: feature:7797432-7797476:1:exon
so has part: feature:7798125-7798193:1:exon
so has part: feature:7800380-7800427:1:exon
so has part: feature:7801184-7801234:1:exon
so has part: feature:7804661-7804774:1:exon
so has part: feature:7812094-7812706:1:exon

position:7812706:1
position: 7812706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7771109-7771341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7792699-7792731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7795712-7795759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7797432-7797476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7798125-7798193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7800380-7800427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7801184-7801234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7804661-7804774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7812094-7812706:1:exon

position:7812094:1
position: 7812094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CD99
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X1
translation: MARGAALALLLFGLLGALVAAPDDGFDLSDALPDNEDKKPTATPKKPSAGDDFDLGDAVVDGGNDDPPPPNPPKPKPNPNPDQAGSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENAEQGEVDMESHRNANAEPAVQRTLLEK
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(7771275..7771341,7792699..7792731,7795712..7795759,7797432..7797476,7798125..7798193,7800380..7800427,7801184..7801234,7804661..7804774,7817550..7817606,7820103..7820128)
location: region:7771275-7820128:1
so has part: feature:7771275-7771341:1:exon
so has part: feature:7792699-7792731:1:exon
so has part: feature:7795712-7795759:1:exon
so has part: feature:7797432-7797476:1:exon
so has part: feature:7798125-7798193:1:exon
so has part: feature:7800380-7800427:1:exon
so has part: feature:7801184-7801234:1:exon
so has part: feature:7804661-7804774:1:exon
so has part: feature:7817550-7817606:1:exon
so has part: feature:7820103-7820128:1:exon

XP_010367495.1
type: Protein
SIO_000068: ncbiprotein

position:7771275:1
position: 7771275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7820128:1
position: 7820128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7771275-7771341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7792699-7792731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7795712-7795759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7797432-7797476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7798125-7798193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7800380-7800427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7801184-7801234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7804661-7804774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7817550-7817606:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7820103-7820128:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CD99
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X2
translation: MARGAALALLLFGLLGALVAAPDDGFDLSDALPDNEDKKPTATPKKPSAGDDFDLGDAVVDGGNDDPPPPNPPKPKPNPNPDQAGSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENEQGEVDMESHRNANAEPAVQRTLLEK
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(7771275..7771341,7792699..7792731,7795712..7795759,7797432..7797476,7798125..7798193,7800380..7800427,7801184..7801234,7804661..7804774,7817553..7817606,7820103..7820128)
location: region:7771275-7820128:1
so has part: feature:7771275-7771341:1:exon
so has part: feature:7792699-7792731:1:exon
so has part: feature:7795712-7795759:1:exon
so has part: feature:7797432-7797476:1:exon
so has part: feature:7798125-7798193:1:exon
so has part: feature:7800380-7800427:1:exon
so has part: feature:7801184-7801234:1:exon
so has part: feature:7804661-7804774:1:exon
so has part: feature:7817553-7817606:1:exon
so has part: feature:7820103-7820128:1:exon

XP_010367497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7771275-7771341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7792699-7792731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7795712-7795759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7797432-7797476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7798125-7798193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7800380-7800427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7801184-7801234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7804661-7804774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7817553-7817606:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7820103-7820128:1:exon

CD99
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CD99
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD99 antigen isoform X3
translation: MARGAALALLLFGLLGALVAAPDDGFDLSDALPDNEDKKPTATPKKPSAGDDFDLGDAVVDGGNDDPPPPNPPKPKPNPNPDQAGSSGSFSDADLADGVSGGEGKGGSDGGGSHRKEGEEADAPGVIPGIVGAVVVAVAGAISSFIAYQKKKLCFKENDELKT
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(7771275..7771341,7792699..7792731,7795712..7795759,7797432..7797476,7798125..7798193,7800380..7800427,7801184..7801234,7804661..7804774,7812094..7812110)
location: region:7771275-7812110:1
so has part: feature:7771275-7771341:1:exon
so has part: feature:7792699-7792731:1:exon
so has part: feature:7795712-7795759:1:exon
so has part: feature:7797432-7797476:1:exon
so has part: feature:7798125-7798193:1:exon
so has part: feature:7800380-7800427:1:exon
so has part: feature:7801184-7801234:1:exon
so has part: feature:7804661-7804774:1:exon
so has part: feature:7812094-7812110:1:exon

XP_010367498.1
type: Protein
SIO_000068: ncbiprotein

position:7812110:1
position: 7812110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7771275-7771341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7792699-7792731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7795712-7795759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7797432-7797476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7798125-7798193:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7800380-7800427:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7801184-7801234:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7804661-7804774:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7812094-7812110:1:exon

LOC104667027
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104667027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7835075..7876263
location: region:7835075-7876263:1
so has part: feature:7835075-7876263:1:exon
subclass of: SO_0000010

104667027
type: Gene
SIO_000068: ncbigene

position:7835075:1
position: 7835075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7876263:1
position: 7876263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835075-7876263:1:exon

LOC104667027
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104667027
product: ribonuclease H2 subunit C-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926255.1
SIO_010081: LOC104667027
subclass of: SO_0000673
so part of: LOC104667027
location: join(7835075..7835777,7852745..7853249,7855292..7855333,7859070..7859093,7875719..7876263)
location: region:7835075-7876263:1
so has part: feature:7835075-7835777:1:exon
so has part: feature:7852745-7853249:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7859070-7859093:1:exon
so has part: feature:7875719-7876263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7835075-7835777:1:exon

position:7835777:1
position: 7835777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7852745-7853249:1:exon

position:7852745:1
position: 7852745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7853249:1
position: 7853249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7855292-7855333:1:exon

position:7855292:1
position: 7855292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7855333:1
position: 7855333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7859070-7859093:1:exon

position:7859070:1
position: 7859070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7859093:1
position: 7859093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7875719-7876263:1:exon

position:7875719:1
position: 7875719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104667027
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC104667027
product: ribonuclease H2 subunit C-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055818.1
SIO_010081: LOC104667027
so part of: LOC104667027
location: join(7835075..7835777,7852745..7853312,7855289..7855333,7856257..7857275)
location: region:7835075-7857275:1
so has part: feature:7835075-7835777:1:exon
so has part: feature:7852745-7853312:1:exon
so has part: feature:7855289-7855333:1:exon
so has part: feature:7856257-7857275:1:exon

position:7857275:1
position: 7857275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835075-7835777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7852745-7853312:1:exon

position:7853312:1
position: 7853312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7855289-7855333:1:exon

position:7855289:1
position: 7855289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7856257-7857275:1:exon

position:7856257:1
position: 7856257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104667027
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC104667027
product: ribonuclease H2 subunit C-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004055819.1
SIO_010081: LOC104667027
so part of: LOC104667027
location: join(7835077..7835777,7852745..7853249,7855292..7855333,7856112..7856242)
location: region:7835077-7856242:1
so has part: feature:7835077-7835777:1:exon
so has part: feature:7852745-7853249:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7856112-7856242:1:exon

position:7835077:1
position: 7835077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7856242:1
position: 7856242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835077-7835777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7852745-7853249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7856112-7856242:1:exon

position:7856112:1
position: 7856112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104667027
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC104667027
product: ribonuclease H2 subunit C-like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004055820.1
SIO_010081: LOC104667027
so part of: LOC104667027
location: join(7835077..7835777,7852745..7853249,7855292..7855333,7856070..7856196)
location: region:7835077-7856196:1
so has part: feature:7835077-7835777:1:exon
so has part: feature:7852745-7853249:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7856070-7856196:1:exon

position:7856196:1
position: 7856196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835077-7835777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7852745-7853249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7856070-7856196:1:exon

position:7856070:1
position: 7856070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104667027
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC104667027
product: ribonuclease H2 subunit C-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004055817.1
SIO_010081: LOC104667027
so part of: LOC104667027
location: join(7835078..7835777,7852745..7853249,7855292..7855333,7856257..7857275)
location: region:7835078-7857275:1
so has part: feature:7835078-7835777:1:exon
so has part: feature:7852745-7853249:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7856257-7857275:1:exon

position:7835078:1
position: 7835078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835078-7835777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7852745-7853249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7856257-7857275:1:exon

LOC104667027
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104667027
product: ribonuclease H2 subunit C-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926254.1
SIO_010081: LOC104667027
subclass of: SO_0000673
so part of: LOC104667027
location: join(7835093..7835777,7855292..7855333,7859070..7859093,7875719..7876263)
location: region:7835093-7876263:1
so has part: feature:7835093-7835777:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7859070-7859093:1:exon
so has part: feature:7875719-7876263:1:exon

position:7835093:1
position: 7835093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835093-7835777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7859070-7859093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7875719-7876263:1:exon

LOC104667027
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC104667027
product: ribonuclease H2 subunit C-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004055816.1
SIO_010081: LOC104667027
so part of: LOC104667027
location: join(7835108..7835777,7855292..7855333,7856112..7856242)
location: region:7835108-7856242:1
so has part: feature:7835108-7835777:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7856112-7856242:1:exon

position:7835108:1
position: 7835108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835108-7835777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7856112-7856242:1:exon

LOC104667027
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC104667027
product: ribonuclease H2 subunit C-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004055815.1
SIO_010081: LOC104667027
so part of: LOC104667027
location: join(7835115..7835777,7855292..7855333,7856257..7857275)
location: region:7835115-7857275:1
so has part: feature:7835115-7835777:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7856257-7857275:1:exon

position:7835115:1
position: 7835115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835115-7835777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7856257-7857275:1:exon

LOC104667027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104667027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104667027 isoform X2
translation: MESWWGLPCLAFLCFLMHARGQRDFDLADALDDPEPTKKPNSVVHFKRDKVASHRSEDGERRRGGYQEVPRPLAPSHTAGRRPRPIAHDTLRGRGGLPSTVRRFFSPAYARAPRDSKCCFGAAVYGARRWRCRPALQDP
SIO_010081: LOC104667027
subclass of: SO_0000673
so part of: LOC104667027
location: join(7835717..7835777,7855292..7855333,7859070..7859093,7875719..7876011)
location: region:7835717-7876011:1
so has part: feature:7835717-7835777:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7859070-7859093:1:exon
so has part: feature:7875719-7876011:1:exon

XP_030782114.1
type: Protein
SIO_000068: ncbiprotein

position:7835717:1
position: 7835717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7876011:1
position: 7876011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7835717-7835777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7859070-7859093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7875719-7876011:1:exon

LOC104667027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104667027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease H2 subunit C-like isoform X3
translation: MMTKRAGGGQVKETLTWRTPLMTLNPPRSQTQSSTLRGIKSRRIGARMERGDEAAIKRYRVHLRPVTQQDAAPAPLHMIPCEVAGDCPPLCGASSRQHTPGPRGTLSVVSGLQSMGRGGGGAAQPCRIRDGD
SIO_010081: LOC104667027
subclass of: SO_0000673
so part of: LOC104667027
location: join(7853220..7853249,7855292..7855333,7859070..7859093,7875719..7876021)
location: region:7853220-7876021:1
so has part: feature:7853220-7853249:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7859070-7859093:1:exon
so has part: feature:7875719-7876021:1:exon

XP_030782115.1
type: Protein
SIO_000068: ncbiprotein

position:7853220:1
position: 7853220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7876021:1
position: 7876021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7853220-7853249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7859070-7859093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7875719-7876021:1:exon

LOC104667027
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104667027
product: ribonuclease H2 subunit C-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926253.1
SIO_010081: LOC104667027
subclass of: SO_0000673
so part of: LOC104667027
location: join(7853449..7853794,7855292..7855333,7859070..7859093,7875719..7876263)
location: region:7853449-7876263:1
so has part: feature:7853449-7853794:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7859070-7859093:1:exon
so has part: feature:7875719-7876263:1:exon

position:7853449:1
position: 7853449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7853449-7853794:1:exon

position:7853794:1
position: 7853794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7859070-7859093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7875719-7876263:1:exon

LOC104667027
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104667027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104667027 isoform X1
translation: MLEGAKKGWIVLQGEPAVITGSREHHLRGTWGTQSLREMAVWDLTCDGTTNSQPPVWVQGQLLCVPWAQSPPPLQGQRDFDLADALDDPEPTKKPNSVVHFKRDKVASHRSEDGERRRGGYQEVPRPLAPSHTAGRRPRPIAHDTLRGRGGLPSTVRRFFSPAYARAPRDSKCCFGAAVYGARRWRCRPALQDP
SIO_010081: LOC104667027
subclass of: SO_0000673
so part of: LOC104667027
location: join(7853569..7853794,7855292..7855333,7859070..7859093,7875719..7876011)
location: region:7853569-7876011:1
so has part: feature:7853569-7853794:1:exon
so has part: feature:7855292-7855333:1:exon
so has part: feature:7859070-7859093:1:exon
so has part: feature:7875719-7876011:1:exon

XP_030782113.1
type: Protein
SIO_000068: ncbiprotein

position:7853569:1
position: 7853569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7853569-7853794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7855292-7855333:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7859070-7859093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7875719-7876011:1:exon

SRY
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: SRY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7871973..7872797)
location: region:7871973-7872797:-1
so has part: feature:7871973-7872797:-1:exon
subclass of: SO_0000010

104667028
type: Gene
SIO_000068: ncbigene

position:7871973:-1
position: 7871973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7872797:-1
position: 7872797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7871973-7872797:-1:exon

SRY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: SRY
product: sex determining region Y
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 mRNAs, 30 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010369191.2
SIO_010081: SRY
subclass of: SO_0000673
so part of: SRY
location: complement(7871973..7872797)
location: region:7871973-7872797:-1
so has part: feature:7871973-7872797:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7871973-7872797:-1:exon

SRY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: SRY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sex-determining region Y protein
translation: MQSYASAMLSVFNTDDYSPAAQQNVPALRRSSSFICTESCSSKYRCEAGENSKGSVQDRVKRPMNAFIVWSRDQRRKMALENPKMLNSEISKQLGYQWKMLTEADKRPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLQNSCSLLPADPSSVLCREMELDNRLYRDDCIKATHSRMQLGHLPPINTASSPQQRDRYSHSTKL
SIO_010081: SRY
subclass of: SO_0000673
so part of: SRY
location: complement(7872099..7872707)
location: region:7872099-7872707:-1
so has part: feature:7872099-7872707:-1:exon

XP_010367493.1
type: Protein
SIO_000068: ncbiprotein

position:7872099:-1
position: 7872099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7872707:-1
position: 7872707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7872099-7872707:-1:exon

RPS4Y1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: RPS4Y1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7905688..7930698
location: region:7905688-7930698:1
so has part: feature:7905688-7930698:1:exon
subclass of: SO_0000010

104667029
type: Gene
SIO_000068: ncbigene

position:7905688:1
position: 7905688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7930698:1
position: 7930698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7905688-7930698:1:exon

RPS4Y1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RPS4Y1
product: ribosomal protein S4 Y-linked 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 483 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010369192.2
SIO_010081: RPS4Y1
subclass of: SO_0000673
so part of: RPS4Y1
location: join(7905688..7905758,7906294..7906371,7908187..7908367,7909734..7909831,7919139..7919310,7929156..7929313,7930536..7930698)
location: region:7905688-7930698:1
so has part: feature:7905688-7905758:1:exon
so has part: feature:7906294-7906371:1:exon
so has part: feature:7908187-7908367:1:exon
so has part: feature:7909734-7909831:1:exon
so has part: feature:7919139-7919310:1:exon
so has part: feature:7929156-7929313:1:exon
so has part: feature:7930536-7930698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7905688-7905758:1:exon

position:7905758:1
position: 7905758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7906294-7906371:1:exon

position:7906294:1
position: 7906294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7906371:1
position: 7906371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7908187-7908367:1:exon

position:7908187:1
position: 7908187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7908367:1
position: 7908367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7909734-7909831:1:exon

position:7909734:1
position: 7909734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7909831:1
position: 7909831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7919139-7919310:1:exon

position:7919139:1
position: 7919139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7919310:1
position: 7919310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7929156-7929313:1:exon

position:7929156:1
position: 7929156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7929313:1
position: 7929313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7930536-7930698:1:exon

position:7930536:1
position: 7930536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS4Y1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RPS4Y1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4, Y isoform X1
translation: MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPTGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGIKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGDGNKPWISLPRGKGIRLTVAEERDKRLATKQSSG
SIO_010081: RPS4Y1
subclass of: SO_0000673
so part of: RPS4Y1
location: join(7905756..7905758,7906294..7906371,7908187..7908367,7909734..7909831,7919139..7919310,7929156..7929313,7930536..7930637)
location: region:7905756-7930637:1
so has part: feature:7905756-7905758:1:exon
so has part: feature:7906294-7906371:1:exon
so has part: feature:7908187-7908367:1:exon
so has part: feature:7909734-7909831:1:exon
so has part: feature:7919139-7919310:1:exon
so has part: feature:7929156-7929313:1:exon
so has part: feature:7930536-7930637:1:exon

XP_010367494.1
type: Protein
SIO_000068: ncbiprotein

position:7905756:1
position: 7905756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7930637:1
position: 7930637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7905756-7905758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7906294-7906371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7908187-7908367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7909734-7909831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7919139-7919310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7929156-7929313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7930536-7930637:1:exon

RPS4Y1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RPS4Y1
product: ribosomal protein S4 Y-linked 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 376 ESTs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030926256.1
SIO_010081: RPS4Y1
subclass of: SO_0000673
so part of: RPS4Y1
location: join(7906002..7906077,7906294..7906371,7908187..7908367,7909734..7909831,7919139..7919310,7929156..7929313,7930536..7930698)
location: region:7906002-7930698:1
so has part: feature:7906002-7906077:1:exon
so has part: feature:7906294-7906371:1:exon
so has part: feature:7908187-7908367:1:exon
so has part: feature:7909734-7909831:1:exon
so has part: feature:7919139-7919310:1:exon
so has part: feature:7929156-7929313:1:exon
so has part: feature:7930536-7930698:1:exon

position:7906002:1
position: 7906002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7906002-7906077:1:exon

position:7906077:1
position: 7906077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7906294-7906371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7908187-7908367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7909734-7909831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7919139-7919310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7929156-7929313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7930536-7930698:1:exon

RPS4Y1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RPS4Y1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4, Y isoform X2
translation: MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRVDVTYPTGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGIKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGDGNKPWISLPRGKGIRLTVAEERDKRLATKQSSG
SIO_010081: RPS4Y1
subclass of: SO_0000673
so part of: RPS4Y1
location: join(7906075..7906077,7906294..7906371,7908187..7908367,7909734..7909831,7919139..7919310,7929156..7929313,7930536..7930637)
location: region:7906075-7930637:1
so has part: feature:7906075-7906077:1:exon
so has part: feature:7906294-7906371:1:exon
so has part: feature:7908187-7908367:1:exon
so has part: feature:7909734-7909831:1:exon
so has part: feature:7919139-7919310:1:exon
so has part: feature:7929156-7929313:1:exon
so has part: feature:7930536-7930637:1:exon

XP_030782116.1
type: Protein
SIO_000068: ncbiprotein

position:7906075:1
position: 7906075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7906075-7906077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7906294-7906371:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7908187-7908367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7909734-7909831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7919139-7919310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7929156-7929313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7930536-7930637:1:exon

LOC104667033
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104667033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7950013..7952194)
location: region:7950013-7952194:-1
so has part: feature:7950013-7952194:-1:exon

104667033
type: Gene
SIO_000068: ncbigene

position:7950013:-1
position: 7950013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7952194:-1
position: 7952194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7950013-7952194:-1:exon

LOC104667033
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104667033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104667033
subclass of: SO_0000673
so part of: LOC104667033
location: complement(7950013..7950885)
location: region:7950013-7950885:-1
so has part: feature:7950013-7950885:-1:exon

position:7950885:-1
position: 7950885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7950013-7950885:-1:exon

LOC104667033
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104667033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104667033
subclass of: SO_0000673
so part of: LOC104667033
location: complement(7950983..7951025)
location: region:7950983-7951025:-1
so has part: feature:7950983-7951025:-1:exon

position:7950983:-1
position: 7950983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7951025:-1
position: 7951025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7950983-7951025:-1:exon

LOC104667033
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104667033
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104667033
subclass of: SO_0000673
so part of: LOC104667033
location: complement(7951667..7952194)
location: region:7951667-7952194:-1
so has part: feature:7951667-7952194:-1:exon

position:7951667:-1
position: 7951667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7951667-7952194:-1:exon

LOC104667025
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104667025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7987521..7988134)
location: region:7987521-7988134:-1
so has part: feature:7987521-7988134:-1:exon

104667025
type: Gene
SIO_000068: ncbigene

position:7987521:-1
position: 7987521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7988134:-1
position: 7988134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7987521-7988134:-1:exon

LOC104667025
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC104667025
product: ragulator complex protein LAMTOR4 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 8 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_004055808.1
SIO_010081: LOC104667025
so part of: LOC104667025
location: complement(7987521..7988134)
location: region:7987521-7988134:-1
so has part: feature:7987521-7988134:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7987521-7988134:-1:exon

LOC104667032
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104667032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8017221..8018527)
location: region:8017221-8018527:-1
so has part: feature:8017221-8018527:-1:exon

104667032
type: Gene
SIO_000068: ncbigene

position:8017221:-1
position: 8017221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8018527:-1
position: 8018527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8017221-8018527:-1:exon

LOC104667032
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104667032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC104667032
subclass of: SO_0000673
so part of: LOC104667032
location: complement(8017221..8017264)
location: region:8017221-8017264:-1
so has part: feature:8017221-8017264:-1:exon

position:8017264:-1
position: 8017264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8017221-8017264:-1:exon

LOC104667032
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104667032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC104667032
subclass of: SO_0000673
so part of: LOC104667032
location: complement(8017574..8018225)
location: region:8017574-8018225:-1
so has part: feature:8017574-8018225:-1:exon

position:8017574:-1
position: 8017574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8018225:-1
position: 8018225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8017574-8018225:-1:exon

LOC104667032
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104667032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC104667032
subclass of: SO_0000673
so part of: LOC104667032
location: complement(8018310..8018527)
location: region:8018310-8018527:-1
so has part: feature:8018310-8018527:-1:exon

position:8018310:-1
position: 8018310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8018310-8018527:-1:exon

ZFY
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: ZFY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8022636..8073269
location: region:8022636-8073269:1
so has part: feature:8022636-8073269:1:exon
subclass of: SO_0000010

104667024
type: Gene
SIO_000068: ncbigene

position:8022636:1
position: 8022636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8073269:1
position: 8073269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8022636-8073269:1:exon

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ZFY
product: zinc finger protein Y-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 25 ESTs, 35 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030926312.1
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8022636..8023334,8043362..8043450,8051382..8051954,8066324..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8073269)
location: region:8022636-8073269:1
so has part: feature:8022636-8023334:1:exon
so has part: feature:8043362-8043450:1:exon
so has part: feature:8051382-8051954:1:exon
so has part: feature:8066324-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8073269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8022636-8023334:1:exon

position:8023334:1
position: 8023334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8043362-8043450:1:exon

position:8043362:1
position: 8043362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8043450:1
position: 8043450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8051382-8051954:1:exon

position:8051382:1
position: 8051382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8051954:1
position: 8051954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8066324-8066473:1:exon

position:8066324:1
position: 8066324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8066473:1
position: 8066473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8066739-8066882:1:exon

position:8066739:1
position: 8066739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8066882:1
position: 8066882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8067821-8067973:1:exon

position:8067821:1
position: 8067821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8067973:1
position: 8067973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8068750-8068890:1:exon

position:8068750:1
position: 8068750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8068890:1
position: 8068890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8069612-8073269:1:exon

position:8069612:1
position: 8069612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ZFY
product: zinc finger protein Y-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 23 ESTs, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030926314.1
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8022636..8023334,8051382..8051954,8066324..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8073269)
location: region:8022636-8073269:1
so has part: feature:8022636-8023334:1:exon
so has part: feature:8051382-8051954:1:exon
so has part: feature:8066324-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8073269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8022636-8023334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8051382-8051954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8066324-8066473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8066739-8066882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8067821-8067973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8068750-8068890:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8069612-8073269:1:exon

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ZFY
product: zinc finger protein Y-linked, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926316.1
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8022636..8023334,8066324..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8073269)
location: region:8022636-8073269:1
so has part: feature:8022636-8023334:1:exon
so has part: feature:8066324-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8073269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8022636-8023334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8066324-8066473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8066739-8066882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8067821-8067973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8068750-8068890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8069612-8073269:1:exon

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ZFY
product: zinc finger protein Y-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 27 ESTs, 34 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030926313.1
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8022636..8023145,8043362..8043450,8051382..8051954,8066324..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8073269)
location: region:8022636-8073269:1
so has part: feature:8022636-8023145:1:exon
so has part: feature:8043362-8043450:1:exon
so has part: feature:8051382-8051954:1:exon
so has part: feature:8066324-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8073269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8022636-8023145:1:exon

position:8023145:1
position: 8023145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8043362-8043450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8051382-8051954:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8066324-8066473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8066739-8066882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8067821-8067973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8068750-8068890:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8069612-8073269:1:exon

ZFY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ZFY
product: zinc finger protein Y-linked, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926315.1
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8022636..8023145,8051382..8051954,8066324..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8073269)
location: region:8022636-8073269:1
so has part: feature:8022636-8023145:1:exon
so has part: feature:8051382-8051954:1:exon
so has part: feature:8066324-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8073269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8022636-8023145:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8051382-8051954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8066324-8066473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8066739-8066882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8067821-8067973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8068750-8068890:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8069612-8073269:1:exon

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ZFY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger Y-chromosomal protein isoform X1
translation: MDEDEFELQPQEPNSFFDGIGADATHMDGDQIVVEVQEAVFVSNIVDSDITVHNFVPDDPDSVVIQDVIEDVVIEEDVQCSDILEEADVSENVIIPEQVVDSDVTEEVSLPHCTVPDDVLASDITSASMSMPEHVLTSESMHVCDIGHVEHVVHDSVVEAEIITDPLTSDIVSEEVLVADCAPEAIIDASGISVDQQDNDKANCEDYLMISLDDAGKIEHDGSTGVTIDGESEMDPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVSDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAVHEQQIDEDEMKTFVPIAWAAAYGNNSDGIENRNGTASALLHVDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQHHTLVHQENRTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8043390..8043450,8051382..8051954,8066324..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8070795)
location: region:8043390-8070795:1
so has part: feature:8043390-8043450:1:exon
so has part: feature:8051382-8051954:1:exon
so has part: feature:8066324-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8070795:1:exon

XP_030782172.1
type: Protein
SIO_000068: ncbiprotein

position:8043390:1
position: 8043390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8070795:1
position: 8070795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8043390-8043450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8051382-8051954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8066324-8066473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8066739-8066882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8067821-8067973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8068750-8068890:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8069612-8070795:1:exon

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ZFY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger Y-chromosomal protein isoform X1
translation: MDEDEFELQPQEPNSFFDGIGADATHMDGDQIVVEVQEAVFVSNIVDSDITVHNFVPDDPDSVVIQDVIEDVVIEEDVQCSDILEEADVSENVIIPEQVVDSDVTEEVSLPHCTVPDDVLASDITSASMSMPEHVLTSESMHVCDIGHVEHVVHDSVVEAEIITDPLTSDIVSEEVLVADCAPEAIIDASGISVDQQDNDKANCEDYLMISLDDAGKIEHDGSTGVTIDGESEMDPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVSDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAVHEQQIDEDEMKTFVPIAWAAAYGNNSDGIENRNGTASALLHVDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQHHTLVHQENRTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8043390..8043450,8051382..8051954,8066324..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8070795)
location: region:8043390-8070795:1
so has part: feature:8043390-8043450:1:exon
so has part: feature:8051382-8051954:1:exon
so has part: feature:8066324-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8070795:1:exon

XP_030782173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8043390-8043450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8051382-8051954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8066324-8066473:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8066739-8066882:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8067821-8067973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8068750-8068890:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8069612-8070795:1:exon

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ZFY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger Y-chromosomal protein isoform X2
translation: MDGDQIVVEVQEAVFVSNIVDSDITVHNFVPDDPDSVVIQDVIEDVVIEEDVQCSDILEEADVSENVIIPEQVVDSDVTEEVSLPHCTVPDDVLASDITSASMSMPEHVLTSESMHVCDIGHVEHVVHDSVVEAEIITDPLTSDIVSEEVLVADCAPEAIIDASGISVDQQDNDKANCEDYLMISLDDAGKIEHDGSTGVTIDGESEMDPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVSDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAVHEQQIDEDEMKTFVPIAWAAAYGNNSDGIENRNGTASALLHVDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQHHTLVHQENRTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8051399..8051954,8066324..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8070795)
location: region:8051399-8070795:1
so has part: feature:8051399-8051954:1:exon
so has part: feature:8066324-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8070795:1:exon

XP_030782174.1
type: Protein
SIO_000068: ncbiprotein

position:8051399:1
position: 8051399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8051399-8051954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8066324-8066473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8066739-8066882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8067821-8067973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8068750-8068890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8069612-8070795:1:exon

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ZFY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger Y-chromosomal protein isoform X2
translation: MDGDQIVVEVQEAVFVSNIVDSDITVHNFVPDDPDSVVIQDVIEDVVIEEDVQCSDILEEADVSENVIIPEQVVDSDVTEEVSLPHCTVPDDVLASDITSASMSMPEHVLTSESMHVCDIGHVEHVVHDSVVEAEIITDPLTSDIVSEEVLVADCAPEAIIDASGISVDQQDNDKANCEDYLMISLDDAGKIEHDGSTGVTIDGESEMDPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVSDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAVHEQQIDEDEMKTFVPIAWAAAYGNNSDGIENRNGTASALLHVDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQHHTLVHQENRTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8051399..8051954,8066324..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8070795)
location: region:8051399-8070795:1
so has part: feature:8051399-8051954:1:exon
so has part: feature:8066324-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8070795:1:exon

XP_030782175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8051399-8051954:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8066324-8066473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8066739-8066882:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8067821-8067973:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8068750-8068890:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8069612-8070795:1:exon

LOC115895658
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8057434..8093194)
location: region:8057434-8093194:-1
so has part: feature:8057434-8093194:-1:exon
subclass of: SO_0000011

115895658
type: Gene
SIO_000068: ncbigene

position:8057434:-1
position: 8057434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8093194:-1
position: 8093194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8057434-8093194:-1:exon

LOC115895658
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC115895658
product: uncharacterized LOC115895658
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055828.1
SIO_010081: LOC115895658
subclass of: SO_0000673
so part of: LOC115895658
location: complement(join(8057434..8057490,8072601..8072690,8090516..8090621,8093072..8093194))
location: region:8057434-8093194:-1
so has part: feature:8093072-8093194:-1:exon
so has part: feature:8090516-8090621:-1:exon
so has part: feature:8072601-8072690:-1:exon
so has part: feature:8057434-8057490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8093072-8093194:-1:exon

position:8093072:-1
position: 8093072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8090516-8090621:-1:exon

position:8090516:-1
position: 8090516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8090621:-1
position: 8090621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8072601-8072690:-1:exon

position:8072601:-1
position: 8072601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8072690:-1
position: 8072690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8057434-8057490:-1:exon

position:8057490:-1
position: 8057490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZFY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ZFY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger Y-chromosomal protein isoform X3
translation: MDPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVYMTVSDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAVHEQQIDEDEMKTFVPIAWAAAYGNNSDGIENRNGTASALLHVDESAGLGRLAKQKPKKKRRPDSRQYQTAIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYHCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDTKEVQHHTLVHQENRTHQCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSELKKHVAVHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: ZFY
subclass of: SO_0000673
so part of: ZFY
location: join(8066389..8066473,8066739..8066882,8067821..8067973,8068750..8068890,8069612..8070795)
location: region:8066389-8070795:1
so has part: feature:8066389-8066473:1:exon
so has part: feature:8066739-8066882:1:exon
so has part: feature:8067821-8067973:1:exon
so has part: feature:8068750-8068890:1:exon
so has part: feature:8069612-8070795:1:exon

XP_030782176.1
type: Protein
SIO_000068: ncbiprotein

position:8066389:1
position: 8066389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8066389-8066473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8066739-8066882:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8067821-8067973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8068750-8068890:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8069612-8070795:1:exon

LOC104667023
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104667023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8103286..8105084)
location: region:8103286-8105084:-1
so has part: feature:8103286-8105084:-1:exon

104667023
type: Gene
SIO_000068: ncbigene

position:8103286:-1
position: 8103286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8105084:-1
position: 8105084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8103286-8105084:-1:exon

LOC104667023
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104667023
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC104667023
subclass of: SO_0000673
so part of: LOC104667023
location: complement(8103286..8105084)
location: region:8103286-8105084:-1
so has part: feature:8103286-8105084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8103286-8105084:-1:exon

LOC115895643
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8153888..8155389
location: region:8153888-8155389:1
so has part: feature:8153888-8155389:1:exon
subclass of: SO_0000010

115895643
type: Gene
SIO_000068: ncbigene

position:8153888:1
position: 8153888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8155389:1
position: 8155389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8153888-8155389:1:exon

LOC115895643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895643
product: dnaJ homolog subfamily B member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 691 ESTs, 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926277.1
SIO_010081: LOC115895643
subclass of: SO_0000673
so part of: LOC115895643
location: 8153888..8155389
location: region:8153888-8155389:1
so has part: feature:8153888-8155389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8153888-8155389:1:exon

LOC115895643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily B member 6
translation: MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPENKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGGGGSHFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDLFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSGFSSFDTGFTSFGSLGHGGLTSFSSTSFGGGGGMGNFKSISTSTKIVNGRKITTKRIVENGQERVEVEEDGQLKSLTINGKEQLLRLDNK
SIO_010081: LOC115895643
subclass of: SO_0000673
so part of: LOC115895643
location: 8154037..8154765
location: region:8154037-8154765:1
so has part: feature:8154037-8154765:1:exon

XP_030782137.1
type: Protein
SIO_000068: ncbiprotein

position:8154037:1
position: 8154037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8154765:1
position: 8154765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8154037-8154765:1:exon

LOC104668280
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104668280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8321799..8323224
location: region:8321799-8323224:1
so has part: feature:8321799-8323224:1:exon

104668280
type: Gene
SIO_000068: ncbigene

position:8321799:1
position: 8321799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8323224:1
position: 8323224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8321799-8323224:1:exon

LOC104668280
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104668280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins
pseudo: true
SIO_010081: LOC104668280
subclass of: SO_0000673
so part of: LOC104668280
location: 8321799..8321815
location: region:8321799-8321815:1
so has part: feature:8321799-8321815:1:exon

position:8321815:1
position: 8321815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8321799-8321815:1:exon

LOC104668280
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104668280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins
pseudo: true
SIO_010081: LOC104668280
subclass of: SO_0000673
so part of: LOC104668280
location: 8322895..8323224
location: region:8322895-8323224:1
so has part: feature:8322895-8323224:1:exon

position:8322895:1
position: 8322895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8322895-8323224:1:exon

TBL1Y
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: TBL1Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8335464..8547468
location: region:8335464-8547468:1
so has part: feature:8335464-8547468:1:exon
subclass of: SO_0000010

104682414
type: Gene
SIO_000068: ncbigene

position:8335464:1
position: 8335464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8547468:1
position: 8547468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8335464-8547468:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TBL1Y
product: transducin beta like 1 Y-linked, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926290.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8335464..8335775,8417267..8417518,8418585..8418668,8434087..8434181,8470038..8470112,8474973..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535776,8547186..8547468)
location: region:8335464-8547468:1
so has part: feature:8335464-8335775:1:exon
so has part: feature:8417267-8417518:1:exon
so has part: feature:8418585-8418668:1:exon
so has part: feature:8434087-8434181:1:exon
so has part: feature:8470038-8470112:1:exon
so has part: feature:8474973-8475080:1:exon
so has part: feature:8490249-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
so has part: feature:8527338-8527459:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535776:1:exon
so has part: feature:8547186-8547468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8335464-8335775:1:exon

position:8335775:1
position: 8335775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8417267-8417518:1:exon

position:8417267:1
position: 8417267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8417518:1
position: 8417518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8418585-8418668:1:exon

position:8418585:1
position: 8418585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8418668:1
position: 8418668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8434087-8434181:1:exon

position:8434087:1
position: 8434087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8434181:1
position: 8434181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8470038-8470112:1:exon

position:8470038:1
position: 8470038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8470112:1
position: 8470112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8474973-8475080:1:exon

position:8474973:1
position: 8474973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8475080:1
position: 8475080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8490249-8490394:1:exon

position:8490249:1
position: 8490249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8490394:1
position: 8490394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8509019-8509271:1:exon

position:8509019:1
position: 8509019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8509271:1
position: 8509271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8515048-8515168:1:exon

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urn:…
SIO_000300: 10
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position:8515559:1
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urn:…
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:8516569-8516666:1:exon

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position:8516666:1
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urn:…
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position:8520179:1
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urn:…
SIO_000300: 14
SIO_000628: feature:8527338-8527459:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:8527459:1
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urn:…
SIO_000300: 15
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:8532138-8532265:1:exon

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reference: sequence
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position:8532265:1
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urn:…
SIO_000300: 17
SIO_000628: feature:8532823-8532988:1:exon

position:8532823:1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:8535675-8535776:1:exon

position:8535675:1
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reference: sequence
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position:8535776:1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:8547186-8547468:1:exon

position:8547186:1
position: 8547186
reference: sequence
type: ForwardStrandPosition
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TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TBL1Y
product: transducin beta like 1 Y-linked, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926289.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8335464..8335775,8417267..8417518,8418585..8418668,8434087..8434181,8470038..8470112,8474973..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535776,8537008..8537254)
location: region:8335464-8537254:1
so has part: feature:8335464-8335775:1:exon
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position:8537254:1
position: 8537254
reference: sequence
type: ForwardStrandPosition
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urn:…
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urn:…
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SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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urn:…
SIO_000300: 9
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8535675-8535776:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8537008-8537254:1:exon

position:8537008:1
position: 8537008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TBL1Y
product: transducin beta like 1 Y-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926283.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8335464..8335775,8417267..8417518,8418585..8418668,8434087..8434181,8470038..8470112,8474973..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535865)
location: region:8335464-8535865:1
so has part: feature:8335464-8335775:1:exon
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so has part: feature:8509019-8509271:1:exon
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so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
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so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535865:1:exon

position:8535865:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:8335464-8335775:1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:8418585-8418668:1:exon

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SIO_000300: 5
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
SIO_000628: feature:8515559-8515700:1:exon

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SIO_000300: 11
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8520119-8520179:1:exon

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SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8535675-8535865:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TBL1Y
product: transducin beta like 1 Y-linked, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926291.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8335464..8335775,8417267..8417518,8418585..8418668,8434087..8434181,8470038..8470112,8474973..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535865)
location: region:8335464-8535865:1
so has part: feature:8335464-8335775:1:exon
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so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:8335464-8335775:1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:8418585-8418668:1:exon

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SIO_000300: 4
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SIO_000300: 5
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urn:…
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urn:…
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urn:…
SIO_000300: 8
SIO_000628: feature:8509019-8509271:1:exon

urn:…
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SIO_000628: feature:8515559-8515700:1:exon

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SIO_000628: feature:8516396-8516459:1:exon

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SIO_000300: 15
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8535675-8535865:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TBL1Y
product: transducin beta like 1 Y-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926284.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8335464..8335775,8417267..8417518,8418585..8418668,8470038..8470112,8474973..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535865)
location: region:8335464-8535865:1
so has part: feature:8335464-8335775:1:exon
so has part: feature:8417267-8417518:1:exon
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so has part: feature:8515559-8515700:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:8335464-8335775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8417267-8417518:1:exon

urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:8535675-8535865:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TBL1Y
product: transducin beta like 1 Y-linked, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926286.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8335464..8335775,8474973..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535865)
location: region:8335464-8535865:1
so has part: feature:8335464-8335775:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 14
SIO_000628: feature:8535675-8535865:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TBL1Y
product: transducin beta like 1 Y-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926285.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8378112..8378152,8424605..8424670,8470038..8470112,8474973..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535865)
location: region:8378112-8535865:1
so has part: feature:8378112-8378152:1:exon
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so has part: feature:8535675-8535865:1:exon

position:8378112:1
position: 8378112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8378112-8378152:1:exon

position:8378152:1
position: 8378152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8424605-8424670:1:exon

position:8424605:1
position: 8424605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8424670:1
position: 8424670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8470038-8470112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8474973-8475080:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8490249-8490394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8535675-8535865:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TBL1Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y isoform X4
translation: MMSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPTESLSLIDAVIPDVVQMQQQAFGEKLTQQQASAAAMEASAMAKVAPITPATVSQQNPPKNQEATVNGEQNGARAINNHSKDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGDHDVTSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLTSTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMYIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNTQGDKVGVSASDGSEHFGW
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8475020..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535776,8547186..8547203)
location: region:8475020-8547203:1
so has part: feature:8475020-8475080:1:exon
so has part: feature:8490249-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
so has part: feature:8527338-8527459:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535776:1:exon
so has part: feature:8547186-8547203:1:exon

XP_030782150.1
type: Protein
SIO_000068: ncbiprotein

position:8475020:1
position: 8475020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8547203:1
position: 8547203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8475020-8475080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8490249-8490394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8535675-8535776:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8547186-8547203:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TBL1Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y isoform X3
translation: MMSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPTESLSLIDAVIPDVVQMQQQAFGEKLTQQQASAAAMEASAMAKVAPITPATVSQQNPPKNQEATVNGEQNGARAINNHSKDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGDHDVTSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLTSTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMYIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNTQGDKVGVSASDGSVCVLDLRK
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8475020..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535776,8537008..8537034)
location: region:8475020-8537034:1
so has part: feature:8475020-8475080:1:exon
so has part: feature:8490249-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
so has part: feature:8527338-8527459:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535776:1:exon
so has part: feature:8537008-8537034:1:exon

XP_030782149.1
type: Protein
SIO_000068: ncbiprotein

position:8537034:1
position: 8537034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8475020-8475080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8490249-8490394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8535675-8535776:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8537008-8537034:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TBL1Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y isoform X1
translation: MMSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPTESLSLIDAVIPDVVQMQQQAFGEKLTQQQASAAAMEASAMAKVAPITPATVSQQNPPKNQEATVNGEQNGARAINNHSKDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGDHDVTSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLTSTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMYIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNTQGDKVGVSASDGSVSNISGLPGSGVLGRGIREVGQLMPK
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8475020..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535857)
location: region:8475020-8535857:1
so has part: feature:8475020-8475080:1:exon
so has part: feature:8490249-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
so has part: feature:8527338-8527459:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535857:1:exon

XP_030782143.1
type: Protein
SIO_000068: ncbiprotein

position:8535857:1
position: 8535857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8475020-8475080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8490249-8490394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8535675-8535857:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TBL1Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y isoform X1
translation: MMSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPTESLSLIDAVIPDVVQMQQQAFGEKLTQQQASAAAMEASAMAKVAPITPATVSQQNPPKNQEATVNGEQNGARAINNHSKDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGDHDVTSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLTSTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMYIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNTQGDKVGVSASDGSVSNISGLPGSGVLGRGIREVGQLMPK
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8475020..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535857)
location: region:8475020-8535857:1
so has part: feature:8475020-8475080:1:exon
so has part: feature:8490249-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
so has part: feature:8527338-8527459:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535857:1:exon

XP_030782144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8475020-8475080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8490249-8490394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8535675-8535857:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TBL1Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y isoform X1
translation: MMSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPTESLSLIDAVIPDVVQMQQQAFGEKLTQQQASAAAMEASAMAKVAPITPATVSQQNPPKNQEATVNGEQNGARAINNHSKDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGDHDVTSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLTSTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMYIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNTQGDKVGVSASDGSVSNISGLPGSGVLGRGIREVGQLMPK
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8475020..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535857)
location: region:8475020-8535857:1
so has part: feature:8475020-8475080:1:exon
so has part: feature:8490249-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
so has part: feature:8527338-8527459:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535857:1:exon

XP_030782145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8475020-8475080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8490249-8490394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8535675-8535857:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TBL1Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y isoform X1
translation: MMSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPTESLSLIDAVIPDVVQMQQQAFGEKLTQQQASAAAMEASAMAKVAPITPATVSQQNPPKNQEATVNGEQNGARAINNHSKDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGDHDVTSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLTSTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMYIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNTQGDKVGVSASDGSVSNISGLPGSGVLGRGIREVGQLMPK
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8475020..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535857)
location: region:8475020-8535857:1
so has part: feature:8475020-8475080:1:exon
so has part: feature:8490249-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
so has part: feature:8527338-8527459:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535857:1:exon

XP_030782146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8475020-8475080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8490249-8490394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8535675-8535857:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TBL1Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y isoform X5
translation: MMSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPTESLSLIDAVIPDVVQMQQQAFGEKLTQQQASAAAMEASAMAKVAPITPATVSQQNPPKNQEATVNGEQNGARAINNHSKDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGDHDVTSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLTSTLGQHKGPIFALKWNKKGNYILSAGVDKNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNTQGDKVGVSASDGSVSNISGLPGSGVLGRGIREVGQLMPK
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8475020..8475080,8490249..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535857)
location: region:8475020-8535857:1
so has part: feature:8475020-8475080:1:exon
so has part: feature:8490249-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535857:1:exon

XP_030782151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8475020-8475080:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8490249-8490394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8535675-8535857:1:exon

TBL1Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TBL1Y
product: transducin beta like 1 Y-linked, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 16 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_030926288.1
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8490149..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535776,8537008..8537254)
location: region:8490149-8537254:1
so has part: feature:8490149-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
so has part: feature:8527338-8527459:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535776:1:exon
so has part: feature:8537008-8537254:1:exon

position:8490149:1
position: 8490149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8490149-8490394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8535675-8535776:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8537008-8537254:1:exon

TBL1Y
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TBL1Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1Y isoform X2
translation: MCLKFADRLQISMTAPPSFNLGLTQCHLSRLAAGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPTESLSLIDAVIPDVVQMQQQAFGEKLTQQQASAAAMEASAMAKVAPITPATVSQQNPPKNQEATVNGEQNGARAINNHSKDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGDHDVTSNKDVTSLDWNSDGTLLATGSYDGFARIWTENGNLTSTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMYIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNTQGDKVGVSASDGSVCVLDLRK
SIO_010081: TBL1Y
subclass of: SO_0000673
so part of: TBL1Y
location: join(8490149..8490394,8509019..8509271,8515048..8515168,8515559..8515700,8516396..8516459,8516569..8516666,8520119..8520179,8527338..8527459,8531738..8531812,8532138..8532265,8532823..8532988,8535675..8535776,8537008..8537034)
location: region:8490149-8537034:1
so has part: feature:8490149-8490394:1:exon
so has part: feature:8509019-8509271:1:exon
so has part: feature:8515048-8515168:1:exon
so has part: feature:8515559-8515700:1:exon
so has part: feature:8516396-8516459:1:exon
so has part: feature:8516569-8516666:1:exon
so has part: feature:8520119-8520179:1:exon
so has part: feature:8527338-8527459:1:exon
so has part: feature:8531738-8531812:1:exon
so has part: feature:8532138-8532265:1:exon
so has part: feature:8532823-8532988:1:exon
so has part: feature:8535675-8535776:1:exon
so has part: feature:8537008-8537034:1:exon

XP_030782148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8490149-8490394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8509019-8509271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8515048-8515168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8515559-8515700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8516396-8516459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516569-8516666:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8520119-8520179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8527338-8527459:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8531738-8531812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8532138-8532265:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8532823-8532988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8535675-8535776:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8537008-8537034:1:exon

LOC115895646
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8542142..8605970)
location: region:8542142-8605970:-1
so has part: feature:8542142-8605970:-1:exon
subclass of: SO_0000010

115895646
type: Gene
SIO_000068: ncbigene

position:8542142:-1
position: 8542142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8605970:-1
position: 8605970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8542142-8605970:-1:exon

LOC115895646
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895646
product: G-protein coupled receptor 143-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_030926292.1
SIO_010081: LOC115895646
subclass of: SO_0000673
so part of: LOC115895646
location: complement(join(8542142..8543137,8548171..8548280,8605223..8605970))
location: region:8542142-8605970:-1
so has part: feature:8605223-8605970:-1:exon
so has part: feature:8548171-8548280:-1:exon
so has part: feature:8542142-8543137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8605223-8605970:-1:exon

position:8605223:-1
position: 8605223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8548171-8548280:-1:exon

position:8548171:-1
position: 8548171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8548280:-1
position: 8548280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8542142-8543137:-1:exon

position:8543137:-1
position: 8543137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895646
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC115895646
product: G-protein coupled receptor 143-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004055827.1
SIO_010081: LOC115895646
so part of: LOC115895646
location: complement(join(8542142..8543137,8548171..8548280,8604576..8604662))
location: region:8542142-8604662:-1
so has part: feature:8604576-8604662:-1:exon
so has part: feature:8548171-8548280:-1:exon
so has part: feature:8542142-8543137:-1:exon

position:8604662:-1
position: 8604662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8604576-8604662:-1:exon

position:8604576:-1
position: 8604576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8548171-8548280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8542142-8543137:-1:exon

LOC115895646
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 143-like
translation: MDGGPQLARGGGLAGCQITSQYFPQWMPGGSLPRTTGGSPGSRWDKGPGERGRRLHGQLLHAALGARCNLGLDHAIHHCVTMYLPLLLVLLVNPILFGKTVTAGSDASTFEIHTASESCNKNKGDPACQTHRDL
SIO_010081: LOC115895646
subclass of: SO_0000673
so part of: LOC115895646
location: complement(join(8543043..8543137,8548171..8548280,8605223..8605422))
location: region:8543043-8605422:-1
so has part: feature:8605223-8605422:-1:exon
so has part: feature:8548171-8548280:-1:exon
so has part: feature:8543043-8543137:-1:exon

XP_030782152.1
type: Protein
SIO_000068: ncbiprotein

position:8543043:-1
position: 8543043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8605422:-1
position: 8605422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8605223-8605422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8548171-8548280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8543043-8543137:-1:exon

LOC104672369
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104672369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8652040..8693231
location: region:8652040-8693231:1
so has part: feature:8652040-8693231:1:exon
subclass of: SO_0000010

104672369
type: Gene
SIO_000068: ncbigene

position:8652040:1
position: 8652040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8693231:1
position: 8693231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8652040-8693231:1:exon

LOC104672369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104672369
product: cAMP-dependent protein kinase catalytic subunit PRKX-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926331.1
SIO_010081: LOC104672369
subclass of: SO_0000673
so part of: LOC104672369
location: join(8652040..8652275,8662985..8663101,8666142..8666224,8666904..8667067,8667605..8667855,8684008..8684271,8689102..8689221,8693132..8693231)
location: region:8652040-8693231:1
so has part: feature:8652040-8652275:1:exon
so has part: feature:8662985-8663101:1:exon
so has part: feature:8666142-8666224:1:exon
so has part: feature:8666904-8667067:1:exon
so has part: feature:8667605-8667855:1:exon
so has part: feature:8684008-8684271:1:exon
so has part: feature:8689102-8689221:1:exon
so has part: feature:8693132-8693231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8652040-8652275:1:exon

position:8652275:1
position: 8652275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8662985-8663101:1:exon

position:8662985:1
position: 8662985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8663101:1
position: 8663101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8666142-8666224:1:exon

position:8666142:1
position: 8666142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8666224:1
position: 8666224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8666904-8667067:1:exon

position:8666904:1
position: 8666904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8667067:1
position: 8667067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8667605-8667855:1:exon

position:8667605:1
position: 8667605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8667855:1
position: 8667855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8684008-8684271:1:exon

position:8684008:1
position: 8684008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8684271:1
position: 8684271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8689102-8689221:1:exon

position:8689102:1
position: 8689102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8689221:1
position: 8689221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8693132-8693231:1:exon

position:8693132:1
position: 8693132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104672369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104672369
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:8684087..8684089,aa:OTHER)
product: LOW QUALITY PROTEIN: cAMP-dependent protein kinase catalytic subunit PRKX-like
translation: MHLKPLSSSPMMVEQASRRLTLPCLNTFSEDVNDLQRKEVQVRGWKFLPPPALVRPPPPSCGLRRPHRDCQCGRRLPVCEWAMNGLRHDKHGGLLSSLLSLLAISFLPSEVTGKRDFRCWFLRRMHFHAVLSLNVSFWEACTAVWEEEEEEKVEKEIEEEEEVKEKEEDIEEEKKEKEEMEEKGKEEERVFELKLSQQDTPPADCVAAVVSSFVRRLNGLHRFLLSLGTGTFRRVHLVKEKTAKHFFALKVMSIPHVIRLKQEQHVHSEKSVLKEVSHPFLIRLFWMWHDEHFLYMLMEYVPSGELFSYLXIRGHFSSTTGLFYSAEIICAIEYLHSKEIVYRDLKPENILLDRDGHIKLTVFGFAKKLVDRTWTLCGTPEYLAPEVIQSKGHGRAVDWWALGILIFEMLSGFPPFFDDNLFGIYQKILAGKIDFPRHLDFHVK
SIO_010081: LOC104672369
subclass of: SO_0000673
so part of: LOC104672369
location: join(8652040..8652275,8662985..8663101,8666142..8666224,8666904..8667067,8667605..8667855,8684008..8684271,8689102..8689221,8693132..8693231)
location: region:8652040-8693231:1
so has part: feature:8652040-8652275:1:exon
so has part: feature:8662985-8663101:1:exon
so has part: feature:8666142-8666224:1:exon
so has part: feature:8666904-8667067:1:exon
so has part: feature:8667605-8667855:1:exon
so has part: feature:8684008-8684271:1:exon
so has part: feature:8689102-8689221:1:exon
so has part: feature:8693132-8693231:1:exon

XP_030782191.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8652040-8652275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8662985-8663101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8666142-8666224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8666904-8667067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8667605-8667855:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8684008-8684271:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8689102-8689221:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8693132-8693231:1:exon

LOC115895648
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8709979..8710622
location: region:8709979-8710622:1
so has part: feature:8709979-8710622:1:exon
subclass of: SO_0000010

115895648
type: Gene
SIO_000068: ncbigene

position:8709979:1
position: 8709979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8710622:1
position: 8710622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8709979-8710622:1:exon

LOC115895648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895648
product: 60S ribosomal protein L29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 373 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926299.1
SIO_010081: LOC115895648
subclass of: SO_0000673
so part of: LOC115895648
location: 8709979..8710622
location: region:8709979-8710622:1
so has part: feature:8709979-8710622:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8709979-8710622:1:exon

LOC115895648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L29
translation: MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKAMSARAEAVKALVKPKEVKPKIPKGVSRKLDRLAYIAHPKLGKRARARIAKGLRLCRPKAKAKDQTKAQAAAPVSIPAQAPKGAQATTKATE
SIO_010081: LOC115895648
subclass of: SO_0000673
so part of: LOC115895648
location: 8710012..8710479
location: region:8710012-8710479:1
so has part: feature:8710012-8710479:1:exon

XP_030782159.1
type: Protein
SIO_000068: ncbiprotein

position:8710012:1
position: 8710012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8710479:1
position: 8710479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8710012-8710479:1:exon

LOC115895695
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895695
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8717568..8717674
location: region:8717568-8717674:1
so has part: feature:8717568-8717674:1:exon
subclass of: SO_0000623

115895695
type: Gene
SIO_000068: ncbigene

position:8717568:1
position: 8717568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8717674:1
position: 8717674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8717568-8717674:1:exon

LOC115895695
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895695
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055839.1
SIO_010081: LOC115895695
subclass of: SO_0000673
so part of: LOC115895695
location: 8717568..8717674
location: region:8717568-8717674:1
so has part: feature:8717568-8717674:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8717568-8717674:1:exon

USP9Y
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: USP9Y
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8803144..9029501
location: region:8803144-9029501:1
so has part: feature:8803144-9029501:1:exon
subclass of: SO_0000010

104657053
type: Gene
SIO_000068: ncbigene

position:8803144:1
position: 8803144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9029501:1
position: 9029501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8803144-9029501:1:exon

USP9Y
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: USP9Y
product: ubiquitin specific peptidase 9 Y-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010356752.2
SIO_010081: USP9Y
subclass of: SO_0000673
so part of: USP9Y
location: join(8803144..8803355,8805412..8805458,8850681..8850726,8858226..8858369,8870031..8870179,8871548..8871627,8874820..8874932,8876249..8876467,8886388..8886503,8886655..8886906,8887071..8887209,8888817..8888969,8890163..8890267,8911469..8911675,8916330..8916466,8918326..8918459,8929271..8929358,8931735..8932077,8934210..8934305,8935387..8935598,8936769..8937009,8937327..8937476,8938227..8938347,8951892..8952022,8952211..8952489,8956039..8956164,8957125..8957250,8958692..8958861,8973490..8973598,8973907..8974053,8974864..8975010,8976332..8976554,8983098..8983318,8985727..8985917,9001681..9001854,9006245..9006386,9008198..9008948,9009345..9009468,9010597..9010822,9011424..9011553,9015403..9015588,9016319..9016539,9016624..9016712,9025750..9025906,9026047..9026259,9026979..9027074,9028719..9029501)
location: region:8803144-9029501:1
so has part: feature:8803144-8803355:1:exon
so has part: feature:8805412-8805458:1:exon
so has part: feature:8850681-8850726:1:exon
so has part: feature:8858226-8858369:1:exon
so has part: feature:8870031-8870179:1:exon
so has part: feature:8871548-8871627:1:exon
so has part: feature:8874820-8874932:1:exon
so has part: feature:8876249-8876467:1:exon
so has part: feature:8886388-8886503:1:exon
so has part: feature:8886655-8886906:1:exon
so has part: feature:8887071-8887209:1:exon
so has part: feature:8888817-8888969:1:exon
so has part: feature:8890163-8890267:1:exon
so has part: feature:8911469-8911675:1:exon
so has part: feature:8916330-8916466:1:exon
so has part: feature:8918326-8918459:1:exon
so has part: feature:8929271-8929358:1:exon
so has part: feature:8931735-8932077:1:exon
so has part: feature:8934210-8934305:1:exon
so has part: feature:8935387-8935598:1:exon
so has part: feature:8936769-8937009:1:exon
so has part: feature:8937327-8937476:1:exon
so has part: feature:8938227-8938347:1:exon
so has part: feature:8951892-8952022:1:exon
so has part: feature:8952211-8952489:1:exon
so has part: feature:8956039-8956164:1:exon
so has part: feature:8957125-8957250:1:exon
so has part: feature:8958692-8958861:1:exon
so has part: feature:8973490-8973598:1:exon
so has part: feature:8973907-8974053:1:exon
so has part: feature:8974864-8975010:1:exon
so has part: feature:8976332-8976554:1:exon
so has part: feature:8983098-8983318:1:exon
so has part: feature:8985727-8985917:1:exon
so has part: feature:9001681-9001854:1:exon
so has part: feature:9006245-9006386:1:exon
so has part: feature:9008198-9008948:1:exon
so has part: feature:9009345-9009468:1:exon
so has part: feature:9010597-9010822:1:exon
so has part: feature:9011424-9011553:1:exon
so has part: feature:9015403-9015588:1:exon
so has part: feature:9016319-9016539:1:exon
so has part: feature:9016624-9016712:1:exon
so has part: feature:9025750-9025906:1:exon
so has part: feature:9026047-9026259:1:exon
so has part: feature:9026979-9027074:1:exon
so has part: feature:9028719-9029501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8803144-8803355:1:exon

position:8803355:1
position: 8803355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8805412-8805458:1:exon

position:8805412:1
position: 8805412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8805458:1
position: 8805458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8850681-8850726:1:exon

position:8850681:1
position: 8850681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8850726:1
position: 8850726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8858226-8858369:1:exon

position:8858226:1
position: 8858226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8858369:1
position: 8858369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8870031-8870179:1:exon

position:8870031:1
position: 8870031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8870179:1
position: 8870179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8871548-8871627:1:exon

position:8871548:1
position: 8871548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8871627:1
position: 8871627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8874820-8874932:1:exon

position:8874820:1
position: 8874820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8874932:1
position: 8874932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8876249-8876467:1:exon

position:8876249:1
position: 8876249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8876467:1
position: 8876467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8886388-8886503:1:exon

position:8886388:1
position: 8886388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8886503:1
position: 8886503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8886655-8886906:1:exon

position:8886655:1
position: 8886655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8886906:1
position: 8886906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8887071-8887209:1:exon

position:8887071:1
position: 8887071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8887209:1
position: 8887209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8888817-8888969:1:exon

position:8888817:1
position: 8888817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8888969:1
position: 8888969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8890163-8890267:1:exon

position:8890163:1
position: 8890163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8890267:1
position: 8890267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8911469-8911675:1:exon

position:8911469:1
position: 8911469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8911675:1
position: 8911675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8916330-8916466:1:exon

position:8916330:1
position: 8916330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8916466:1
position: 8916466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8918326-8918459:1:exon

position:8918326:1
position: 8918326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8918459:1
position: 8918459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8929271-8929358:1:exon

position:8929271:1
position: 8929271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8929358:1
position: 8929358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8931735-8932077:1:exon

position:8931735:1
position: 8931735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8932077:1
position: 8932077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8934210-8934305:1:exon

position:8934210:1
position: 8934210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8934305:1
position: 8934305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8935387-8935598:1:exon

position:8935387:1
position: 8935387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8935598:1
position: 8935598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8936769-8937009:1:exon

position:8936769:1
position: 8936769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8937009:1
position: 8937009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:8937327-8937476:1:exon

position:8937327:1
position: 8937327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8937476:1
position: 8937476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:8938227-8938347:1:exon

position:8938227:1
position: 8938227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8938347:1
position: 8938347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:8951892-8952022:1:exon

position:8951892:1
position: 8951892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8952022:1
position: 8952022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:8952211-8952489:1:exon

position:8952211:1
position: 8952211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8952489:1
position: 8952489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:8956039-8956164:1:exon

position:8956039:1
position: 8956039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8956164:1
position: 8956164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:8957125-8957250:1:exon

position:8957125:1
position: 8957125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8957250:1
position: 8957250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:8958692-8958861:1:exon

position:8958692:1
position: 8958692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8958861:1
position: 8958861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:8973490-8973598:1:exon

position:8973490:1
position: 8973490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8973598:1
position: 8973598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:8973907-8974053:1:exon

position:8973907:1
position: 8973907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition