Rhinopithecus roxellana isolate Shanxi Qingling chromosome 21, ASM756505v1, whole genome shotgun sequence.
type: Entry
definition: Rhinopithecus roxellana isolate Shanxi Qingling chromosome 21, ASM756505v1, whole genome shotgun sequence.
sequence version: NC_044569.1
sequence date: 2019-09-25
sequence: sequence
division: CON
label: NC_044569.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA565017
dblink: SAMN11039125
keyword: WGS
keyword: RefSeq
source: Rhinopithecus roxellana (golden snub-nosed monkey)
organism: Rhinopithecus roxellana
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM017371.1.\nAssembly name: ASM756505v1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Northwest University on\n2019/07/29. The original whole-genome shotgun project has the\naccession VMRL00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Northwest University\nAssembly Date :: 11-OCT-2018\nAssembly Method :: FALCON v. June-2016\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Rhinopithecus roxellana Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 81002553
topology: linear
so has quality: SO_0000987
location: 1..81002553
location: region:1-81002553:1
RO_0002162: 61622

NC_044569
type: RefSeq
SIO_000068: refseq

PRJNA565017
type: BioProject
SIO_000068: bioproject

SAMN11039125
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81002553:1
position: 81002553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-81002553:1:source
so part of: sequence
organism: Rhinopithecus roxellana
mol type: genomic DNA
isolate: Shanxi Qingling
chromosome: 21
sex: male
tissue type: heart
dev stage: adult

61622
type: Taxonomy
SIO_000068: taxonomy

LOC115895585
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895585
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(22926..23001)
location: region:22926-23001:-1
so has part: feature:22926-23001:-1:exon

115895585
type: Gene
SIO_000068: ncbigene

position:22926:-1
position: 22926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23001:-1
position: 23001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22926-23001:-1:exon

LOC115895585
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895585
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115895585
subclass of: SO_0000673
so part of: LOC115895585
location: complement(22926..23001)
location: region:22926-23001:-1
so has part: feature:22926-23001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22926-23001:-1:exon

COLEC12
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: COLEC12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 79793..139448
location: region:79793-139448:1
so has part: feature:79793-139448:1:exon
subclass of: SO_0000010

104655466
type: Gene
SIO_000068: ncbigene

position:79793:1
position: 79793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139448:1
position: 139448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79793-139448:1:exon

COLEC12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: COLEC12
product: collectin subfamily member 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 119 ESTs, 7 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926175.1
SIO_010081: COLEC12
subclass of: SO_0000673
so part of: COLEC12
location: join(79793..79948,84808..84972,96557..96626,100921..101043,110129..110227,111254..112300,122959..123447,125048..125184,126415..126524,137000..137145,138739..139448)
location: region:79793-139448:1
so has part: feature:79793-79948:1:exon
so has part: feature:84808-84972:1:exon
so has part: feature:96557-96626:1:exon
so has part: feature:100921-101043:1:exon
so has part: feature:110129-110227:1:exon
so has part: feature:111254-112300:1:exon
so has part: feature:122959-123447:1:exon
so has part: feature:125048-125184:1:exon
so has part: feature:126415-126524:1:exon
so has part: feature:137000-137145:1:exon
so has part: feature:138739-139448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79793-79948:1:exon

position:79948:1
position: 79948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84808-84972:1:exon

position:84808:1
position: 84808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84972:1
position: 84972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:96557-96626:1:exon

position:96557:1
position: 96557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96626:1
position: 96626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:100921-101043:1:exon

position:100921:1
position: 100921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101043:1
position: 101043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:110129-110227:1:exon

position:110129:1
position: 110129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110227:1
position: 110227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:111254-112300:1:exon

position:111254:1
position: 111254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112300:1
position: 112300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122959-123447:1:exon

position:122959:1
position: 122959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123447:1
position: 123447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125048-125184:1:exon

position:125048:1
position: 125048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125184:1
position: 125184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:126415-126524:1:exon

position:126415:1
position: 126415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126524:1
position: 126524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:137000-137145:1:exon

position:137000:1
position: 137000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137145:1
position: 137145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:138739-139448:1:exon

position:138739:1
position: 138739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COLEC12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: COLEC12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: collectin-12
translation: MAQSSPKAIQGYGWQFGCEVLEGTGGKKELGRKRTAEDGRGKQILGEKKEGDGLRARGGPSSEMNKEHDLAGQCSSFTAVQCTELHVPQVPLAHIGTIRYRTQGVHQLPDCVIYHNVCSNQILCGSTKVEGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYKVVEKMDNVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKAISTNSELSTFRSDILDLRQQLREITEKTSKNKDTLEKLQASGDALVDRQSQLKETLENNSFLITTVNKTLQAYNGYVTNLQQDTSVLQGNLQNQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSQAIQRIKNDFQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLNSFTGQMENITTISQANEQNLKDLQDLHKDAENRTAIKFNQLEERFQLFETDIVNIISNISYTAHHLRTLTSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDLMRSRLDTEVANLSVIMEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPTGNKGQKGEKGEPGPPGPAGERGPIGPAGPPGERGGKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKEGLPGPQGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAVVPLALQNEPTPAPEDNGCPPHWKNFTDKCYYFSVEKEIFEEAKLFCEDKSSHLVFINTREEQQWIKKQMVGRESHWIGLTDSEHENEWKWLDGTSPDYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDFQCEDVNNFICEKDRETVLSSAL
SIO_010081: COLEC12
subclass of: SO_0000673
so part of: COLEC12
location: join(79793..79948,84808..84972,96557..96626,100921..101043,110129..110227,111254..112300,122959..123447,125048..125184,126415..126524,137000..137145,138739..138758)
location: region:79793-138758:1
so has part: feature:79793-79948:1:exon
so has part: feature:84808-84972:1:exon
so has part: feature:96557-96626:1:exon
so has part: feature:100921-101043:1:exon
so has part: feature:110129-110227:1:exon
so has part: feature:111254-112300:1:exon
so has part: feature:122959-123447:1:exon
so has part: feature:125048-125184:1:exon
so has part: feature:126415-126524:1:exon
so has part: feature:137000-137145:1:exon
so has part: feature:138739-138758:1:exon

XP_030782035.1
type: Protein
SIO_000068: ncbiprotein

position:138758:1
position: 138758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79793-79948:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84808-84972:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:96557-96626:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:100921-101043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110129-110227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111254-112300:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122959-123447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125048-125184:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126415-126524:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:137000-137145:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:138739-138758:1:exon

THOC1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: THOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 162236..217026
location: region:162236-217026:1
so has part: feature:162236-217026:1:exon
subclass of: SO_0000010

104655464
type: Gene
SIO_000068: ncbigene

position:162236:1
position: 162236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217026:1
position: 217026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162236-217026:1:exon

THOC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: THOC1
product: THO complex 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 205 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_010354891.2
SIO_010081: THOC1
subclass of: SO_0000673
so part of: THOC1
location: join(162236..162324,164772..164845,164939..164999,166195..166261,170014..170132,170584..170632,171043..171138,176240..176322,177957..178030,183251..183359,184713..184844,203906..204006,205402..205468,205666..205716,205811..205881,206597..206692,207263..207328,212292..212375,214920..215067,216040..216115,216625..217026)
location: region:162236-217026:1
so has part: feature:162236-162324:1:exon
so has part: feature:164772-164845:1:exon
so has part: feature:164939-164999:1:exon
so has part: feature:166195-166261:1:exon
so has part: feature:170014-170132:1:exon
so has part: feature:170584-170632:1:exon
so has part: feature:171043-171138:1:exon
so has part: feature:176240-176322:1:exon
so has part: feature:177957-178030:1:exon
so has part: feature:183251-183359:1:exon
so has part: feature:184713-184844:1:exon
so has part: feature:203906-204006:1:exon
so has part: feature:205402-205468:1:exon
so has part: feature:205666-205716:1:exon
so has part: feature:205811-205881:1:exon
so has part: feature:206597-206692:1:exon
so has part: feature:207263-207328:1:exon
so has part: feature:212292-212375:1:exon
so has part: feature:214920-215067:1:exon
so has part: feature:216040-216115:1:exon
so has part: feature:216625-217026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162236-162324:1:exon

position:162324:1
position: 162324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164772-164845:1:exon

position:164772:1
position: 164772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164845:1
position: 164845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164939-164999:1:exon

position:164939:1
position: 164939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164999:1
position: 164999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166195-166261:1:exon

position:166195:1
position: 166195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166261:1
position: 166261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170014-170132:1:exon

position:170014:1
position: 170014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170132:1
position: 170132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170584-170632:1:exon

position:170584:1
position: 170584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170632:1
position: 170632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:171043-171138:1:exon

position:171043:1
position: 171043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171138:1
position: 171138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176240-176322:1:exon

position:176240:1
position: 176240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176322:1
position: 176322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:177957-178030:1:exon

position:177957:1
position: 177957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178030:1
position: 178030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:183251-183359:1:exon

position:183251:1
position: 183251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183359:1
position: 183359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:184713-184844:1:exon

position:184713:1
position: 184713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184844:1
position: 184844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:203906-204006:1:exon

position:203906:1
position: 203906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204006:1
position: 204006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:205402-205468:1:exon

position:205402:1
position: 205402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205468:1
position: 205468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:205666-205716:1:exon

position:205666:1
position: 205666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205716:1
position: 205716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:205811-205881:1:exon

position:205811:1
position: 205811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205881:1
position: 205881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:206597-206692:1:exon

position:206597:1
position: 206597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206692:1
position: 206692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:207263-207328:1:exon

position:207263:1
position: 207263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207328:1
position: 207328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:212292-212375:1:exon

position:212292:1
position: 212292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212375:1
position: 212375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:214920-215067:1:exon

position:214920:1
position: 214920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215067:1
position: 215067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:216040-216115:1:exon

position:216040:1
position: 216040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216115:1
position: 216115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:216625-217026:1:exon

position:216625:1
position: 216625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

THOC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: THOC1
product: THO complex 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 193 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_030925779.1
SIO_010081: THOC1
subclass of: SO_0000673
so part of: THOC1
location: join(162236..162324,164772..164845,164939..164999,166195..166261,170014..170132,170584..170632,171043..171138,176240..176322,177957..178030,183251..183359,184713..184844,203906..204006,205402..205468,205666..205716,205811..205881,206576..206692,207263..207328,212292..212375,214920..215067,216040..216115,216625..217025)
location: region:162236-217025:1
so has part: feature:162236-162324:1:exon
so has part: feature:164772-164845:1:exon
so has part: feature:164939-164999:1:exon
so has part: feature:166195-166261:1:exon
so has part: feature:170014-170132:1:exon
so has part: feature:170584-170632:1:exon
so has part: feature:171043-171138:1:exon
so has part: feature:176240-176322:1:exon
so has part: feature:177957-178030:1:exon
so has part: feature:183251-183359:1:exon
so has part: feature:184713-184844:1:exon
so has part: feature:203906-204006:1:exon
so has part: feature:205402-205468:1:exon
so has part: feature:205666-205716:1:exon
so has part: feature:205811-205881:1:exon
so has part: feature:206576-206692:1:exon
so has part: feature:207263-207328:1:exon
so has part: feature:212292-212375:1:exon
so has part: feature:214920-215067:1:exon
so has part: feature:216040-216115:1:exon
so has part: feature:216625-217025:1:exon

position:217025:1
position: 217025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162236-162324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164772-164845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164939-164999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166195-166261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170014-170132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170584-170632:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171043-171138:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176240-176322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:177957-178030:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183251-183359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:184713-184844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:203906-204006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:205402-205468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205666-205716:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205811-205881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:206576-206692:1:exon

position:206576:1
position: 206576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:207263-207328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:212292-212375:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:214920-215067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:216040-216115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:216625-217025:1:exon

THOC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: THOC1
product: THO complex 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 143 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030925780.1
SIO_010081: THOC1
subclass of: SO_0000673
so part of: THOC1
location: join(162243..162324,164772..164845,164939..164999,166195..166261,169558..169599,170014..170132,170584..170632,171043..171138,176240..176322,177957..178030,183251..183359,184713..184844,203906..204006,205402..205468,205666..205716,205811..205881,206576..206692,207263..207328,212292..212375,214920..215067,216040..216115,216625..217025)
location: region:162243-217025:1
so has part: feature:162243-162324:1:exon
so has part: feature:164772-164845:1:exon
so has part: feature:164939-164999:1:exon
so has part: feature:166195-166261:1:exon
so has part: feature:169558-169599:1:exon
so has part: feature:170014-170132:1:exon
so has part: feature:170584-170632:1:exon
so has part: feature:171043-171138:1:exon
so has part: feature:176240-176322:1:exon
so has part: feature:177957-178030:1:exon
so has part: feature:183251-183359:1:exon
so has part: feature:184713-184844:1:exon
so has part: feature:203906-204006:1:exon
so has part: feature:205402-205468:1:exon
so has part: feature:205666-205716:1:exon
so has part: feature:205811-205881:1:exon
so has part: feature:206576-206692:1:exon
so has part: feature:207263-207328:1:exon
so has part: feature:212292-212375:1:exon
so has part: feature:214920-215067:1:exon
so has part: feature:216040-216115:1:exon
so has part: feature:216625-217025:1:exon

position:162243:1
position: 162243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162243-162324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164772-164845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164939-164999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166195-166261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169558-169599:1:exon

position:169558:1
position: 169558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169599:1
position: 169599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170014-170132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:170584-170632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171043-171138:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:176240-176322:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:177957-178030:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:183251-183359:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:184713-184844:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:203906-204006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205402-205468:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205666-205716:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:205811-205881:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:206576-206692:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:207263-207328:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212292-212375:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:214920-215067:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:216040-216115:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:216625-217025:1:exon

THOC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: THOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 1 isoform X1
translation: MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGVLEEEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESVCFFHHRTSDTKPTRIIRKRTAPEDFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
SIO_010081: THOC1
subclass of: SO_0000673
so part of: THOC1
location: join(162271..162324,164772..164845,164939..164999,166195..166261,170014..170132,170584..170632,171043..171138,176240..176322,177957..178030,183251..183359,184713..184844,203906..204006,205402..205468,205666..205716,205811..205881,206576..206692,207263..207328,212292..212375,214920..215067,216040..216115,216625..216920)
location: region:162271-216920:1
so has part: feature:162271-162324:1:exon
so has part: feature:164772-164845:1:exon
so has part: feature:164939-164999:1:exon
so has part: feature:166195-166261:1:exon
so has part: feature:170014-170132:1:exon
so has part: feature:170584-170632:1:exon
so has part: feature:171043-171138:1:exon
so has part: feature:176240-176322:1:exon
so has part: feature:177957-178030:1:exon
so has part: feature:183251-183359:1:exon
so has part: feature:184713-184844:1:exon
so has part: feature:203906-204006:1:exon
so has part: feature:205402-205468:1:exon
so has part: feature:205666-205716:1:exon
so has part: feature:205811-205881:1:exon
so has part: feature:206576-206692:1:exon
so has part: feature:207263-207328:1:exon
so has part: feature:212292-212375:1:exon
so has part: feature:214920-215067:1:exon
so has part: feature:216040-216115:1:exon
so has part: feature:216625-216920:1:exon

XP_030781639.1
type: Protein
SIO_000068: ncbiprotein

position:162271:1
position: 162271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216920:1
position: 216920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162271-162324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164772-164845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164939-164999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166195-166261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170014-170132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170584-170632:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171043-171138:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176240-176322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:177957-178030:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183251-183359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:184713-184844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:203906-204006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:205402-205468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205666-205716:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205811-205881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:206576-206692:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:207263-207328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:212292-212375:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:214920-215067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:216040-216115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:216625-216920:1:exon

THOC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: THOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 1 isoform X2
translation: MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGVLEEEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRIIRKRTAPEDFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
SIO_010081: THOC1
subclass of: SO_0000673
so part of: THOC1
location: join(162271..162324,164772..164845,164939..164999,166195..166261,170014..170132,170584..170632,171043..171138,176240..176322,177957..178030,183251..183359,184713..184844,203906..204006,205402..205468,205666..205716,205811..205881,206597..206692,207263..207328,212292..212375,214920..215067,216040..216115,216625..216920)
location: region:162271-216920:1
so has part: feature:162271-162324:1:exon
so has part: feature:164772-164845:1:exon
so has part: feature:164939-164999:1:exon
so has part: feature:166195-166261:1:exon
so has part: feature:170014-170132:1:exon
so has part: feature:170584-170632:1:exon
so has part: feature:171043-171138:1:exon
so has part: feature:176240-176322:1:exon
so has part: feature:177957-178030:1:exon
so has part: feature:183251-183359:1:exon
so has part: feature:184713-184844:1:exon
so has part: feature:203906-204006:1:exon
so has part: feature:205402-205468:1:exon
so has part: feature:205666-205716:1:exon
so has part: feature:205811-205881:1:exon
so has part: feature:206597-206692:1:exon
so has part: feature:207263-207328:1:exon
so has part: feature:212292-212375:1:exon
so has part: feature:214920-215067:1:exon
so has part: feature:216040-216115:1:exon
so has part: feature:216625-216920:1:exon

XP_010353193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:162271-162324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164772-164845:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164939-164999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166195-166261:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170014-170132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170584-170632:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171043-171138:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176240-176322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:177957-178030:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183251-183359:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:184713-184844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:203906-204006:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:205402-205468:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205666-205716:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:205811-205881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:206597-206692:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:207263-207328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:212292-212375:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:214920-215067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:216040-216115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:216625-216920:1:exon

THOC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: THOC1
product: THO complex 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 140 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010354890.2
SIO_010081: THOC1
subclass of: SO_0000673
so part of: THOC1
location: join(167505..169599,170014..170132,170584..170632,171043..171138,176240..176322,177957..178030,183251..183359,184713..184844,203906..204006,205402..205468,205666..205716,205811..205881,206576..206692,207263..207328,212292..212375,214920..215067,216040..216115,216625..217025)
location: region:167505-217025:1
so has part: feature:167505-169599:1:exon
so has part: feature:170014-170132:1:exon
so has part: feature:170584-170632:1:exon
so has part: feature:171043-171138:1:exon
so has part: feature:176240-176322:1:exon
so has part: feature:177957-178030:1:exon
so has part: feature:183251-183359:1:exon
so has part: feature:184713-184844:1:exon
so has part: feature:203906-204006:1:exon
so has part: feature:205402-205468:1:exon
so has part: feature:205666-205716:1:exon
so has part: feature:205811-205881:1:exon
so has part: feature:206576-206692:1:exon
so has part: feature:207263-207328:1:exon
so has part: feature:212292-212375:1:exon
so has part: feature:214920-215067:1:exon
so has part: feature:216040-216115:1:exon
so has part: feature:216625-217025:1:exon

position:167505:1
position: 167505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167505-169599:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170014-170132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170584-170632:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171043-171138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:176240-176322:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177957-178030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183251-183359:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:184713-184844:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:203906-204006:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205402-205468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:205666-205716:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:205811-205881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:206576-206692:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:207263-207328:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:212292-212375:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:214920-215067:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:216040-216115:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:216625-217025:1:exon

THOC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: THOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 1 isoform X3
translation: MCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESVCFFHHRTSDTKPTRIIRKRTAPEDFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
SIO_010081: THOC1
subclass of: SO_0000673
so part of: THOC1
location: join(170623..170632,171043..171138,176240..176322,177957..178030,183251..183359,184713..184844,203906..204006,205402..205468,205666..205716,205811..205881,206576..206692,207263..207328,212292..212375,214920..215067,216040..216115,216625..216920)
location: region:170623-216920:1
so has part: feature:170623-170632:1:exon
so has part: feature:171043-171138:1:exon
so has part: feature:176240-176322:1:exon
so has part: feature:177957-178030:1:exon
so has part: feature:183251-183359:1:exon
so has part: feature:184713-184844:1:exon
so has part: feature:203906-204006:1:exon
so has part: feature:205402-205468:1:exon
so has part: feature:205666-205716:1:exon
so has part: feature:205811-205881:1:exon
so has part: feature:206576-206692:1:exon
so has part: feature:207263-207328:1:exon
so has part: feature:212292-212375:1:exon
so has part: feature:214920-215067:1:exon
so has part: feature:216040-216115:1:exon
so has part: feature:216625-216920:1:exon

XP_030781640.1
type: Protein
SIO_000068: ncbiprotein

position:170623:1
position: 170623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170623-170632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171043-171138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176240-176322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177957-178030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183251-183359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:184713-184844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203906-204006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205402-205468:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:205666-205716:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205811-205881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206576-206692:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:207263-207328:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212292-212375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:214920-215067:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:216040-216115:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:216625-216920:1:exon

THOC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: THOC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THO complex subunit 1 isoform X3
translation: MCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKESVCFFHHRTSDTKPTRIIRKRTAPEDFLGKGPSKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
SIO_010081: THOC1
subclass of: SO_0000673
so part of: THOC1
location: join(170623..170632,171043..171138,176240..176322,177957..178030,183251..183359,184713..184844,203906..204006,205402..205468,205666..205716,205811..205881,206576..206692,207263..207328,212292..212375,214920..215067,216040..216115,216625..216920)
location: region:170623-216920:1
so has part: feature:170623-170632:1:exon
so has part: feature:171043-171138:1:exon
so has part: feature:176240-176322:1:exon
so has part: feature:177957-178030:1:exon
so has part: feature:183251-183359:1:exon
so has part: feature:184713-184844:1:exon
so has part: feature:203906-204006:1:exon
so has part: feature:205402-205468:1:exon
so has part: feature:205666-205716:1:exon
so has part: feature:205811-205881:1:exon
so has part: feature:206576-206692:1:exon
so has part: feature:207263-207328:1:exon
so has part: feature:212292-212375:1:exon
so has part: feature:214920-215067:1:exon
so has part: feature:216040-216115:1:exon
so has part: feature:216625-216920:1:exon

XP_010353192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:170623-170632:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171043-171138:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176240-176322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:177957-178030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183251-183359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:184713-184844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:203906-204006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205402-205468:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:205666-205716:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:205811-205881:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206576-206692:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:207263-207328:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:212292-212375:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:214920-215067:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:216040-216115:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:216625-216920:1:exon

USP14
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: USP14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(216154..273590)
location: region:216154-273590:-1
so has part: feature:216154-273590:-1:exon
subclass of: SO_0000010

104655465
type: Gene
SIO_000068: ncbigene

position:216154:-1
position: 216154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273590:-1
position: 273590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216154-273590:-1:exon

USP14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: USP14
product: ubiquitin specific peptidase 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 161 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010354892.2
SIO_010081: USP14
subclass of: SO_0000673
so part of: USP14
location: complement(join(216154..216648,220116..220293,220923..221030,221696..221756,226539..226667,227778..227870,228023..228088,231616..231730,232837..232922,233276..233356,234149..234279,238148..238206,251295..251398,252579..252683,265005..265037,268531..268676,273256..273590))
location: region:216154-273590:-1
so has part: feature:273256-273590:-1:exon
so has part: feature:268531-268676:-1:exon
so has part: feature:265005-265037:-1:exon
so has part: feature:252579-252683:-1:exon
so has part: feature:251295-251398:-1:exon
so has part: feature:238148-238206:-1:exon
so has part: feature:234149-234279:-1:exon
so has part: feature:233276-233356:-1:exon
so has part: feature:232837-232922:-1:exon
so has part: feature:231616-231730:-1:exon
so has part: feature:228023-228088:-1:exon
so has part: feature:227778-227870:-1:exon
so has part: feature:226539-226667:-1:exon
so has part: feature:221696-221756:-1:exon
so has part: feature:220923-221030:-1:exon
so has part: feature:220116-220293:-1:exon
so has part: feature:216154-216648:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273256-273590:-1:exon

position:273256:-1
position: 273256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268531-268676:-1:exon

position:268531:-1
position: 268531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268676:-1
position: 268676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265005-265037:-1:exon

position:265005:-1
position: 265005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265037:-1
position: 265037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:252579-252683:-1:exon

position:252579:-1
position: 252579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252683:-1
position: 252683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:251295-251398:-1:exon

position:251295:-1
position: 251295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251398:-1
position: 251398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:238148-238206:-1:exon

position:238148:-1
position: 238148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238206:-1
position: 238206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:234149-234279:-1:exon

position:234149:-1
position: 234149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234279:-1
position: 234279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:233276-233356:-1:exon

position:233276:-1
position: 233276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233356:-1
position: 233356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:232837-232922:-1:exon

position:232837:-1
position: 232837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232922:-1
position: 232922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:231616-231730:-1:exon

position:231616:-1
position: 231616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231730:-1
position: 231730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:228023-228088:-1:exon

position:228023:-1
position: 228023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228088:-1
position: 228088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:227778-227870:-1:exon

position:227778:-1
position: 227778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227870:-1
position: 227870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:226539-226667:-1:exon

position:226539:-1
position: 226539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226667:-1
position: 226667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:221696-221756:-1:exon

position:221696:-1
position: 221696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221756:-1
position: 221756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:220923-221030:-1:exon

position:220923:-1
position: 220923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221030:-1
position: 221030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:220116-220293:-1:exon

position:220116:-1
position: 220116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220293:-1
position: 220293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:216154-216648:-1:exon

position:216648:-1
position: 216648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

USP14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: USP14
product: ubiquitin specific peptidase 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 480 ESTs, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030925781.1
SIO_010081: USP14
subclass of: SO_0000673
so part of: USP14
location: complement(join(216917..220293,220923..221030,221696..221756,226539..226667,227778..227870,228023..228088,231616..231730,232837..232922,233276..233356,234149..234279,238148..238206,251295..251398,252579..252683,265005..265037,268531..268676,273256..273590))
location: region:216917-273590:-1
so has part: feature:273256-273590:-1:exon
so has part: feature:268531-268676:-1:exon
so has part: feature:265005-265037:-1:exon
so has part: feature:252579-252683:-1:exon
so has part: feature:251295-251398:-1:exon
so has part: feature:238148-238206:-1:exon
so has part: feature:234149-234279:-1:exon
so has part: feature:233276-233356:-1:exon
so has part: feature:232837-232922:-1:exon
so has part: feature:231616-231730:-1:exon
so has part: feature:228023-228088:-1:exon
so has part: feature:227778-227870:-1:exon
so has part: feature:226539-226667:-1:exon
so has part: feature:221696-221756:-1:exon
so has part: feature:220923-221030:-1:exon
so has part: feature:216917-220293:-1:exon

position:216917:-1
position: 216917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273256-273590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268531-268676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265005-265037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252579-252683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251295-251398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238148-238206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234149-234279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233276-233356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232837-232922:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231616-231730:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228023-228088:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:227778-227870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226539-226667:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:221696-221756:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:220923-221030:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:216917-220293:-1:exon

USP14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: USP14
product: ubiquitin specific peptidase 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 374 ESTs, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_030925782.1
SIO_010081: USP14
subclass of: SO_0000673
so part of: USP14
location: complement(join(216917..220293,220923..221030,221696..221756,226539..226667,227778..227870,228023..228088,231616..231730,232837..232922,233276..233356,234149..234279,238148..238206,251295..251398,265005..265037,268531..268676,273256..273510))
location: region:216917-273510:-1
so has part: feature:273256-273510:-1:exon
so has part: feature:268531-268676:-1:exon
so has part: feature:265005-265037:-1:exon
so has part: feature:251295-251398:-1:exon
so has part: feature:238148-238206:-1:exon
so has part: feature:234149-234279:-1:exon
so has part: feature:233276-233356:-1:exon
so has part: feature:232837-232922:-1:exon
so has part: feature:231616-231730:-1:exon
so has part: feature:228023-228088:-1:exon
so has part: feature:227778-227870:-1:exon
so has part: feature:226539-226667:-1:exon
so has part: feature:221696-221756:-1:exon
so has part: feature:220923-221030:-1:exon
so has part: feature:216917-220293:-1:exon

position:273510:-1
position: 273510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273256-273510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268531-268676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265005-265037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251295-251398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238148-238206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234149-234279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233276-233356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232837-232922:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231616-231730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228023-228088:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227778-227870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226539-226667:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:221696-221756:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:220923-221030:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:216917-220293:-1:exon

USP14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: USP14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 14 isoform X2
translation: MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE
SIO_010081: USP14
subclass of: SO_0000673
so part of: USP14
location: complement(join(220145..220293,220923..221030,221696..221756,226539..226667,227778..227870,228023..228088,231616..231730,232837..232922,233276..233356,234149..234279,238148..238206,251295..251398,265005..265037,268531..268676,273256..273271))
location: region:220145-273271:-1
so has part: feature:273256-273271:-1:exon
so has part: feature:268531-268676:-1:exon
so has part: feature:265005-265037:-1:exon
so has part: feature:251295-251398:-1:exon
so has part: feature:238148-238206:-1:exon
so has part: feature:234149-234279:-1:exon
so has part: feature:233276-233356:-1:exon
so has part: feature:232837-232922:-1:exon
so has part: feature:231616-231730:-1:exon
so has part: feature:228023-228088:-1:exon
so has part: feature:227778-227870:-1:exon
so has part: feature:226539-226667:-1:exon
so has part: feature:221696-221756:-1:exon
so has part: feature:220923-221030:-1:exon
so has part: feature:220145-220293:-1:exon

XP_030781642.1
type: Protein
SIO_000068: ncbiprotein

position:220145:-1
position: 220145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273271:-1
position: 273271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273256-273271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268531-268676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265005-265037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251295-251398:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238148-238206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:234149-234279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233276-233356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:232837-232922:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:231616-231730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:228023-228088:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:227778-227870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226539-226667:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:221696-221756:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:220923-221030:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:220145-220293:-1:exon

USP14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: USP14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 14 isoform X1
translation: MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE
SIO_010081: USP14
subclass of: SO_0000673
so part of: USP14
location: complement(join(220145..220293,220923..221030,221696..221756,226539..226667,227778..227870,228023..228088,231616..231730,232837..232922,233276..233356,234149..234279,238148..238206,251295..251398,252579..252683,265005..265037,268531..268676,273256..273271))
location: region:220145-273271:-1
so has part: feature:273256-273271:-1:exon
so has part: feature:268531-268676:-1:exon
so has part: feature:265005-265037:-1:exon
so has part: feature:252579-252683:-1:exon
so has part: feature:251295-251398:-1:exon
so has part: feature:238148-238206:-1:exon
so has part: feature:234149-234279:-1:exon
so has part: feature:233276-233356:-1:exon
so has part: feature:232837-232922:-1:exon
so has part: feature:231616-231730:-1:exon
so has part: feature:228023-228088:-1:exon
so has part: feature:227778-227870:-1:exon
so has part: feature:226539-226667:-1:exon
so has part: feature:221696-221756:-1:exon
so has part: feature:220923-221030:-1:exon
so has part: feature:220145-220293:-1:exon

XP_030781641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273256-273271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268531-268676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265005-265037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252579-252683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251295-251398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238148-238206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234149-234279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233276-233356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232837-232922:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231616-231730:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228023-228088:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:227778-227870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226539-226667:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:221696-221756:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:220923-221030:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:220145-220293:-1:exon

USP14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: USP14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 14 isoform X1
translation: MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKIKNGMTLLMMGSADALPEEPSAKTVFVEDMTEEQLASAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGALRASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRVLQQKLEAIEDDSVKETDSSSASAATPSKKKSLIDQFFGVEFETTMKCTESEEEEVTKGKENQLQLSCFINQEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFPLMLDMYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNTSDKKSSPQKEVKYEPFSFADDIGSNNCGYYDLQAVLTHQGRSSSSGHYVSWVKRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEESE
SIO_010081: USP14
subclass of: SO_0000673
so part of: USP14
location: complement(join(220145..220293,220923..221030,221696..221756,226539..226667,227778..227870,228023..228088,231616..231730,232837..232922,233276..233356,234149..234279,238148..238206,251295..251398,252579..252683,265005..265037,268531..268676,273256..273271))
location: region:220145-273271:-1
so has part: feature:273256-273271:-1:exon
so has part: feature:268531-268676:-1:exon
so has part: feature:265005-265037:-1:exon
so has part: feature:252579-252683:-1:exon
so has part: feature:251295-251398:-1:exon
so has part: feature:238148-238206:-1:exon
so has part: feature:234149-234279:-1:exon
so has part: feature:233276-233356:-1:exon
so has part: feature:232837-232922:-1:exon
so has part: feature:231616-231730:-1:exon
so has part: feature:228023-228088:-1:exon
so has part: feature:227778-227870:-1:exon
so has part: feature:226539-226667:-1:exon
so has part: feature:221696-221756:-1:exon
so has part: feature:220923-221030:-1:exon
so has part: feature:220145-220293:-1:exon

XP_010353194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273256-273271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268531-268676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:265005-265037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252579-252683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251295-251398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:238148-238206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:234149-234279:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233276-233356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:232837-232922:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:231616-231730:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228023-228088:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:227778-227870:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:226539-226667:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:221696-221756:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:220923-221030:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:220145-220293:-1:exon

ROCK1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: ROCK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(308206..462493)
location: region:308206-462493:-1
so has part: feature:308206-462493:-1:exon
subclass of: SO_0000010

104655463
type: Gene
SIO_000068: ncbigene

position:308206:-1
position: 308206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462493:-1
position: 462493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308206-462493:-1:exon

ROCK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ROCK1
product: Rho associated coiled-coil containing protein kinase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 282 ESTs, 13 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010354888.2
SIO_010081: ROCK1
subclass of: SO_0000673
so part of: ROCK1
location: complement(join(308206..309862,312398..312605,313588..313849,313972..314050,315965..316053,316266..316336,323302..323461,324141..324329,325168..325256,325507..325600,326749..326914,336126..336220,338978..339047,340556..340740,343443..343603,347697..347847,349690..349796,363402..363648,363752..363843,365066..365201,372639..372687,376930..377018,380682..380742,386083..386242,398860..398951,401503..401641,401976..402120,403399..403483,404564..404739,408037..408173,408725..408825,422466..422547,462335..462493))
location: region:308206-462493:-1
so has part: feature:462335-462493:-1:exon
so has part: feature:422466-422547:-1:exon
so has part: feature:408725-408825:-1:exon
so has part: feature:408037-408173:-1:exon
so has part: feature:404564-404739:-1:exon
so has part: feature:403399-403483:-1:exon
so has part: feature:401976-402120:-1:exon
so has part: feature:401503-401641:-1:exon
so has part: feature:398860-398951:-1:exon
so has part: feature:386083-386242:-1:exon
so has part: feature:380682-380742:-1:exon
so has part: feature:376930-377018:-1:exon
so has part: feature:372639-372687:-1:exon
so has part: feature:365066-365201:-1:exon
so has part: feature:363752-363843:-1:exon
so has part: feature:363402-363648:-1:exon
so has part: feature:349690-349796:-1:exon
so has part: feature:347697-347847:-1:exon
so has part: feature:343443-343603:-1:exon
so has part: feature:340556-340740:-1:exon
so has part: feature:338978-339047:-1:exon
so has part: feature:336126-336220:-1:exon
so has part: feature:326749-326914:-1:exon
so has part: feature:325507-325600:-1:exon
so has part: feature:325168-325256:-1:exon
so has part: feature:324141-324329:-1:exon
so has part: feature:323302-323461:-1:exon
so has part: feature:316266-316336:-1:exon
so has part: feature:315965-316053:-1:exon
so has part: feature:313972-314050:-1:exon
so has part: feature:313588-313849:-1:exon
so has part: feature:312398-312605:-1:exon
so has part: feature:308206-309862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462335-462493:-1:exon

position:462335:-1
position: 462335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:422466-422547:-1:exon

position:422466:-1
position: 422466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422547:-1
position: 422547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:408725-408825:-1:exon

position:408725:-1
position: 408725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408825:-1
position: 408825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:408037-408173:-1:exon

position:408037:-1
position: 408037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408173:-1
position: 408173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:404564-404739:-1:exon

position:404564:-1
position: 404564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404739:-1
position: 404739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:403399-403483:-1:exon

position:403399:-1
position: 403399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403483:-1
position: 403483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:401976-402120:-1:exon

position:401976:-1
position: 401976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402120:-1
position: 402120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:401503-401641:-1:exon

position:401503:-1
position: 401503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401641:-1
position: 401641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:398860-398951:-1:exon

position:398860:-1
position: 398860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398951:-1
position: 398951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:386083-386242:-1:exon

position:386083:-1
position: 386083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386242:-1
position: 386242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:380682-380742:-1:exon

position:380682:-1
position: 380682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380742:-1
position: 380742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:376930-377018:-1:exon

position:376930:-1
position: 376930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377018:-1
position: 377018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:372639-372687:-1:exon

position:372639:-1
position: 372639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372687:-1
position: 372687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:365066-365201:-1:exon

position:365066:-1
position: 365066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365201:-1
position: 365201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:363752-363843:-1:exon

position:363752:-1
position: 363752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363843:-1
position: 363843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:363402-363648:-1:exon

position:363402:-1
position: 363402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363648:-1
position: 363648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:349690-349796:-1:exon

position:349690:-1
position: 349690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349796:-1
position: 349796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:347697-347847:-1:exon

position:347697:-1
position: 347697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347847:-1
position: 347847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:343443-343603:-1:exon

position:343443:-1
position: 343443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343603:-1
position: 343603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:340556-340740:-1:exon

position:340556:-1
position: 340556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340740:-1
position: 340740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:338978-339047:-1:exon

position:338978:-1
position: 338978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339047:-1
position: 339047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:336126-336220:-1:exon

position:336126:-1
position: 336126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336220:-1
position: 336220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:326749-326914:-1:exon

position:326749:-1
position: 326749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326914:-1
position: 326914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:325507-325600:-1:exon

position:325507:-1
position: 325507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325600:-1
position: 325600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:325168-325256:-1:exon

position:325168:-1
position: 325168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325256:-1
position: 325256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:324141-324329:-1:exon

position:324141:-1
position: 324141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324329:-1
position: 324329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:323302-323461:-1:exon

position:323302:-1
position: 323302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323461:-1
position: 323461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:316266-316336:-1:exon

position:316266:-1
position: 316266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316336:-1
position: 316336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:315965-316053:-1:exon

position:315965:-1
position: 315965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316053:-1
position: 316053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:313972-314050:-1:exon

position:313972:-1
position: 313972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314050:-1
position: 314050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:313588-313849:-1:exon

position:313588:-1
position: 313588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313849:-1
position: 313849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:312398-312605:-1:exon

position:312398:-1
position: 312398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312605:-1
position: 312605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:308206-309862:-1:exon

position:309862:-1
position: 309862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROCK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ROCK1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho-associated protein kinase 1
translation: MSTGDSFETRFEKIDNLLRDPKSEVNSDCLLDGLDALVYDLDFPALRKNKNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMXKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAFVGNQLPFVGFTYYSNRRYLSSANPNDNRTSSNADKSLQESLQKTIYKLEEQLHNEMQLKDEMEQKCRTSNIKLDKIMKELDEEGNQRRNLESTVSQIEKEKMLLQHRINEYQRKAEQENEKRRNVENEVSTLKDQLEDLKKVSQNSQLANEKLSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLEQEVNEHKVTKARLTDKHQSIEEAKSVAMCEMEKKLKEEREAREKAENRVVQIEKQCSMLDVDLKQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQMKQEINTLLEAKRLLEFELAQLTKQYRGNEGQMRELQDQLEAEQYFSTLYKTQVKELKEEIEEKNRENLKKIQELQNEKETLATQLDLAETKAESEQLARGLLEEQYFELTQESKKAASRNRQEITDKDHAVSRLEETNSMLTKDMEILRRENEELTEKMKKAEEEYKLEKEEEISNLKAAFEKNINTERTLKTQAVNKLAEIMNRKDFKIDRKKANTQDLRKKEKENRKLQLELNQEREKFNQMVVKHQKELNDMQAQLVEECAHRNELQMQLASKESDIEQLRAKLLDLSDSTSVASFPSADETDGNLPESRIEGWLSVPNRGNIKRYGWKKQYVVVSSKKILFYNDEQDKEQSNPSMVLDIDKLFHVRPVTQGDVYRAETEEIPKIFQILYANEGECRKDVEMEPVQQAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECRRCHVKCHRDHLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASPRTLSTRSTANQSFRKVVKTTSGKTS
SIO_010081: ROCK1
subclass of: SO_0000673
so part of: ROCK1
location: complement(join(309859..309862,312398..312605,313588..313849,313972..314050,315965..316053,316266..316336,323302..323461,324141..324329,325168..325256,325507..325600,326749..326914,336126..336220,338978..339047,340556..340740,343443..343603,347697..347847,349690..349796,363402..363648,363752..363843,365066..365201,372639..372687,376930..377018,380682..380742,386083..386242,398860..398951,401503..401641,401976..402120,403399..403483,404564..404739,408037..408173,408725..408825,422466..422547,462335..462427))
location: region:309859-462427:-1
so has part: feature:462335-462427:-1:exon
so has part: feature:422466-422547:-1:exon
so has part: feature:408725-408825:-1:exon
so has part: feature:408037-408173:-1:exon
so has part: feature:404564-404739:-1:exon
so has part: feature:403399-403483:-1:exon
so has part: feature:401976-402120:-1:exon
so has part: feature:401503-401641:-1:exon
so has part: feature:398860-398951:-1:exon
so has part: feature:386083-386242:-1:exon
so has part: feature:380682-380742:-1:exon
so has part: feature:376930-377018:-1:exon
so has part: feature:372639-372687:-1:exon
so has part: feature:365066-365201:-1:exon
so has part: feature:363752-363843:-1:exon
so has part: feature:363402-363648:-1:exon
so has part: feature:349690-349796:-1:exon
so has part: feature:347697-347847:-1:exon
so has part: feature:343443-343603:-1:exon
so has part: feature:340556-340740:-1:exon
so has part: feature:338978-339047:-1:exon
so has part: feature:336126-336220:-1:exon
so has part: feature:326749-326914:-1:exon
so has part: feature:325507-325600:-1:exon
so has part: feature:325168-325256:-1:exon
so has part: feature:324141-324329:-1:exon
so has part: feature:323302-323461:-1:exon
so has part: feature:316266-316336:-1:exon
so has part: feature:315965-316053:-1:exon
so has part: feature:313972-314050:-1:exon
so has part: feature:313588-313849:-1:exon
so has part: feature:312398-312605:-1:exon
so has part: feature:309859-309862:-1:exon

XP_010353190.2
type: Protein
SIO_000068: ncbiprotein

position:309859:-1
position: 309859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462427:-1
position: 462427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462335-462427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422466-422547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:408725-408825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:408037-408173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404564-404739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:403399-403483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:401976-402120:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:401503-401641:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:398860-398951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386083-386242:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:380682-380742:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:376930-377018:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:372639-372687:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:365066-365201:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:363752-363843:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:363402-363648:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:349690-349796:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:347697-347847:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:343443-343603:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:340556-340740:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:338978-339047:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:336126-336220:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:326749-326914:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:325507-325600:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:325168-325256:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:324141-324329:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:323302-323461:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:316266-316336:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:315965-316053:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:313972-314050:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:313588-313849:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:312398-312605:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:309859-309862:-1:exon

LOC115895508
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895508
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 463461..487574
location: region:463461-487574:1
so has part: feature:463461-487574:1:exon
subclass of: SO_0000011

115895508
type: Gene
SIO_000068: ncbigene

position:463461:1
position: 463461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487574:1
position: 487574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463461-487574:1:exon

LOC115895508
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC115895508
product: uncharacterized LOC115895508
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055708.1
SIO_010081: LOC115895508
subclass of: SO_0000673
so part of: LOC115895508
location: join(463461..463492,464308..464441,479665..479709,487329..487574)
location: region:463461-487574:1
so has part: feature:463461-463492:1:exon
so has part: feature:464308-464441:1:exon
so has part: feature:479665-479709:1:exon
so has part: feature:487329-487574:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463461-463492:1:exon

position:463492:1
position: 463492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464308-464441:1:exon

position:464308:1
position: 464308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464441:1
position: 464441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479665-479709:1:exon

position:479665:1
position: 479665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479709:1
position: 479709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:487329-487574:1:exon

position:487329:1
position: 487329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104655478
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104655478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(529633..568823)
location: region:529633-568823:-1
so has part: feature:529633-568823:-1:exon

104655478
type: Gene
SIO_000068: ncbigene

position:529633:-1
position: 529633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568823:-1
position: 568823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529633-568823:-1:exon

LOC104655478
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104655478
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC104655478
subclass of: SO_0000673
so part of: LOC104655478
location: complement(529633..529680)
location: region:529633-529680:-1
so has part: feature:529633-529680:-1:exon

position:529680:-1
position: 529680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529633-529680:-1:exon

LOC104655478
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104655478
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC104655478
subclass of: SO_0000673
so part of: LOC104655478
location: complement(531111..532158)
location: region:531111-532158:-1
so has part: feature:531111-532158:-1:exon

position:531111:-1
position: 531111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532158:-1
position: 532158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531111-532158:-1:exon

LOC104655478
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104655478
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC104655478
subclass of: SO_0000673
so part of: LOC104655478
location: complement(568710..568823)
location: region:568710-568823:-1
so has part: feature:568710-568823:-1:exon

position:568710:-1
position: 568710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568710-568823:-1:exon

GREB1L
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: GREB1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 719886..882792
location: region:719886-882792:1
so has part: feature:719886-882792:1:exon
subclass of: SO_0000010

104655462
type: Gene
SIO_000068: ncbigene

position:719886:1
position: 719886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882792:1
position: 882792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719886-882792:1:exon

GREB1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: GREB1L
product: GREB1 like retinoic acid receptor coactivator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010354886.2
SIO_010081: GREB1L
subclass of: SO_0000673
so part of: GREB1L
location: join(719886..719981,720695..720797,721683..721958,724133..724242,740135..740300,740829..741026,753625..753801,759291..759467,762971..763093,797144..797260,797882..798001,799014..799151,801820..802005,807344..807670,808866..808994,809952..810086,812226..812423,832473..832653,836475..836667,845327..845460,849809..850148,854801..854916,855580..855824,858831..859408,859640..859742,864875..865030,865264..865403,867564..867725,867825..868029,873279..873444,874876..875103,876013..876154,877422..877622,880018..880156,882574..882792)
location: region:719886-882792:1
so has part: feature:719886-719981:1:exon
so has part: feature:720695-720797:1:exon
so has part: feature:721683-721958:1:exon
so has part: feature:724133-724242:1:exon
so has part: feature:740135-740300:1:exon
so has part: feature:740829-741026:1:exon
so has part: feature:753625-753801:1:exon
so has part: feature:759291-759467:1:exon
so has part: feature:762971-763093:1:exon
so has part: feature:797144-797260:1:exon
so has part: feature:797882-798001:1:exon
so has part: feature:799014-799151:1:exon
so has part: feature:801820-802005:1:exon
so has part: feature:807344-807670:1:exon
so has part: feature:808866-808994:1:exon
so has part: feature:809952-810086:1:exon
so has part: feature:812226-812423:1:exon
so has part: feature:832473-832653:1:exon
so has part: feature:836475-836667:1:exon
so has part: feature:845327-845460:1:exon
so has part: feature:849809-850148:1:exon
so has part: feature:854801-854916:1:exon
so has part: feature:855580-855824:1:exon
so has part: feature:858831-859408:1:exon
so has part: feature:859640-859742:1:exon
so has part: feature:864875-865030:1:exon
so has part: feature:865264-865403:1:exon
so has part: feature:867564-867725:1:exon
so has part: feature:867825-868029:1:exon
so has part: feature:873279-873444:1:exon
so has part: feature:874876-875103:1:exon
so has part: feature:876013-876154:1:exon
so has part: feature:877422-877622:1:exon
so has part: feature:880018-880156:1:exon
so has part: feature:882574-882792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719886-719981:1:exon

position:719981:1
position: 719981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720695-720797:1:exon

position:720695:1
position: 720695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720797:1
position: 720797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:721683-721958:1:exon

position:721683:1
position: 721683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721958:1
position: 721958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:724133-724242:1:exon

position:724133:1
position: 724133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724242:1
position: 724242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:740135-740300:1:exon

position:740135:1
position: 740135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740300:1
position: 740300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:740829-741026:1:exon

position:740829:1
position: 740829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741026:1
position: 741026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:753625-753801:1:exon

position:753625:1
position: 753625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753801:1
position: 753801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:759291-759467:1:exon

position:759291:1
position: 759291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759467:1
position: 759467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:762971-763093:1:exon

position:762971:1
position: 762971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763093:1
position: 763093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:797144-797260:1:exon

position:797144:1
position: 797144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797260:1
position: 797260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:797882-798001:1:exon

position:797882:1
position: 797882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798001:1
position: 798001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:799014-799151:1:exon

position:799014:1
position: 799014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799151:1
position: 799151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:801820-802005:1:exon

position:801820:1
position: 801820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802005:1
position: 802005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:807344-807670:1:exon

position:807344:1
position: 807344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807670:1
position: 807670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:808866-808994:1:exon

position:808866:1
position: 808866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808994:1
position: 808994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:809952-810086:1:exon

position:809952:1
position: 809952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810086:1
position: 810086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:812226-812423:1:exon

position:812226:1
position: 812226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812423:1
position: 812423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:832473-832653:1:exon

position:832473:1
position: 832473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832653:1
position: 832653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:836475-836667:1:exon

position:836475:1
position: 836475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836667:1
position: 836667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:845327-845460:1:exon

position:845327:1
position: 845327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845460:1
position: 845460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:849809-850148:1:exon

position:849809:1
position: 849809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850148:1
position: 850148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:854801-854916:1:exon

position:854801:1
position: 854801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854916:1
position: 854916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:855580-855824:1:exon

position:855580:1
position: 855580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855824:1
position: 855824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:858831-859408:1:exon

position:858831:1
position: 858831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859408:1
position: 859408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:859640-859742:1:exon

position:859640:1
position: 859640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859742:1
position: 859742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:864875-865030:1:exon

position:864875:1
position: 864875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865030:1
position: 865030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:865264-865403:1:exon

position:865264:1
position: 865264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865403:1
position: 865403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:867564-867725:1:exon

position:867564:1
position: 867564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867725:1
position: 867725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:867825-868029:1:exon

position:867825:1
position: 867825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868029:1
position: 868029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:873279-873444:1:exon

position:873279:1
position: 873279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873444:1
position: 873444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:874876-875103:1:exon

position:874876:1
position: 874876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875103:1
position: 875103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:876013-876154:1:exon

position:876013:1
position: 876013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876154:1
position: 876154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:877422-877622:1:exon

position:877422:1
position: 877422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877622:1
position: 877622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:880018-880156:1:exon

position:880018:1
position: 880018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880156:1
position: 880156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:882574-882792:1:exon

position:882574:1
position: 882574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GREB1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: GREB1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GREB1-like protein
translation: MGNSYAGQLKSARFEEALHNSIEASLRCSSVVPRPIFSQLYLDPDQHPFSSADVKPKVEDLDKDLVNRYTQNGSLDFSNNLTVNEMEDDEDDEEMSDSNSPPIPYSQKPAPEGSCTTDGFCQAGKDLRLVSLCMEQIDIPAGFLLVGAKSPNLPEHILVCAVDKRFLPDDHGKNALLGFSGNCIGCGERGFRYFTEFSNHINLKLTTQPKKQKHLKYYLVRSSQGVLSKGPLICWKECRSRQSSASCHSIKPSSSVSSTVTPENGTTNGYKSGFTQTDAANGNSSHGGKGSASSSTPAHTGNYSLSPRPSYASGDQATMFISGPPKKRHRGWYPGSPLPQPGFVVPVPTVRPLSRTEPLLSAPVPQTPLTGILQPRPIPAGETVIVPENLLSNSGVRPVILIGYGTLPYFYGNVGDIVVSPLLVNCYKIPQLENKDLEQLGLTGSQFLSVENMILLTIQYLVRLGPDQVPLREEFEQIMLKAMQEFTLRERALQIGAQCVPVSPGQLPWLARLIASVSQDLVHVIVTQNSLAEGISETLRTLSEMRHYQRLPDYVVAICASKIRGNEFCVVVLGQHQSRALAESMLTTSEFLKEISYELITGKVSFLASHFKTTSLGDDLDKLLEKMQQRRGDSVVTPFNGDLNECVSPQEAAAMIPTQNLDLDNETFQIYQPQLTVARKLLSQVCAIADSGSQSLDLGHFSKVDFIIIVPRSEVLVQQTLQRIRQSGVLVDLGLEENGTAHQRAEKYVVRLDNEIQTKFEVFMRRVKQNPYTLFVLVHDNSHVELTSVISGSLSHGEPSHGLADRVINCREVLEAFNLLVLQVSSFPYTLQTQQSRISSSNEVHWIQLDTGEDVGCEEKLYFGLNEYSKSLQWGITSPLLRCDETFEKMVNTLLERYPRLHSMVVRCYLLIQQYSEALMALTTMASLRDHSTPETLSIMDDLISSPGKNKSGRGHMLIIRVPSVQLAMLAKERLQEVRDKLGLQYRFEIILGNPATELSVATHFVARLKSWRGSEPEEWIPRTYQDLDGLPCIVILTGKDPLGETFPRSLKYCDLRLIDSSYLTRTALEQEVGLACCYVSKEVIRGPTVALDLSGKEQERAAVSENDSDELLIDLERPQSNSSAVTGTSGSIMENGVSSSSTADKSQKQSLTPSFQSPATSLGLDEGVSASSAGAGAGETLKQECDSLGPQMASSTTSKPPSSSSGPRTLPWQGQPIRGCRGPHAALPPVVILSKAAYSLLGSQKSGKLPSSSSLLPHADVAWVSSLRPLLNKDMSSEDQSLYYRQWTSARQHHADYSNQLDPASGTRNFHPRRLLLTGPPQVGKTGSYLQFLRILFRMLIRLLEVDVYDEEEINTDHSESSEVSQSEGEPWPDIESFSKMPFDVSVHDPKYTLMSLVYTEKLAGVKQEVIKESKVEEPRKRETVSIMLTKYAAYNTFHHCEQCRQYMDFTSASQMSDSTLHAFTFSSSMLGEEVQLYFIIPKSKESHFVFSKQGKHLESMRLPLVSDKNLNAVKSPIFTPSSGRHEHGLLNLFHAMEGISHLHLLVVKEYEMPLYRKYWPNHIMLVLPGMFNNAGVGAARFLIKELSYHNLELERNRLEELGIKRQCVWPFIVMMDDSCVLWNIHSVQEPSSQPVEVGVSSKNVSLKTVLQHIEATPKIVHYAILGIQKWSSKLTSQSLKAPFSRCHVHDFILLNIDLTQNVQYDFNRYFCEDVDFNLRTNSSGLFICRFNNFSLMKKHVQVGGQRDFIIKPKIMVSESLAPILPLQYICAPDSEHTLLAAPAQFLLEKFLQHASYKLFPKAIHNFRSPVLAIDCYLNIGPEVAICYISSRPHSSNVNCEGVFFSGLLLYLCDSFVGADLLKKFKFLKGATLCVICQDRSSLRQTIVRLELEDEWQFRLRDEFQTANSSEDKPLYFLTGRHV
SIO_010081: GREB1L
subclass of: SO_0000673
so part of: GREB1L
location: join(740144..740300,740829..741026,753625..753801,759291..759467,762971..763093,797144..797260,797882..798001,799014..799151,801820..802005,807344..807670,808866..808994,809952..810086,812226..812423,832473..832653,836475..836667,845327..845460,849809..850148,854801..854916,855580..855824,858831..859408,859640..859742,864875..865030,865264..865403,867564..867725,867825..868029,873279..873444,874876..875103,876013..876154,877422..877622,880018..880156,882574..882737)
location: region:740144-882737:1
so has part: feature:740144-740300:1:exon
so has part: feature:740829-741026:1:exon
so has part: feature:753625-753801:1:exon
so has part: feature:759291-759467:1:exon
so has part: feature:762971-763093:1:exon
so has part: feature:797144-797260:1:exon
so has part: feature:797882-798001:1:exon
so has part: feature:799014-799151:1:exon
so has part: feature:801820-802005:1:exon
so has part: feature:807344-807670:1:exon
so has part: feature:808866-808994:1:exon
so has part: feature:809952-810086:1:exon
so has part: feature:812226-812423:1:exon
so has part: feature:832473-832653:1:exon
so has part: feature:836475-836667:1:exon
so has part: feature:845327-845460:1:exon
so has part: feature:849809-850148:1:exon
so has part: feature:854801-854916:1:exon
so has part: feature:855580-855824:1:exon
so has part: feature:858831-859408:1:exon
so has part: feature:859640-859742:1:exon
so has part: feature:864875-865030:1:exon
so has part: feature:865264-865403:1:exon
so has part: feature:867564-867725:1:exon
so has part: feature:867825-868029:1:exon
so has part: feature:873279-873444:1:exon
so has part: feature:874876-875103:1:exon
so has part: feature:876013-876154:1:exon
so has part: feature:877422-877622:1:exon
so has part: feature:880018-880156:1:exon
so has part: feature:882574-882737:1:exon

XP_010353188.2
type: Protein
SIO_000068: ncbiprotein

position:740144:1
position: 740144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882737:1
position: 882737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:740144-740300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740829-741026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753625-753801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759291-759467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:762971-763093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797144-797260:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:797882-798001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799014-799151:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:801820-802005:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:807344-807670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:808866-808994:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809952-810086:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:812226-812423:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:832473-832653:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:836475-836667:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845327-845460:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:849809-850148:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:854801-854916:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:855580-855824:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:858831-859408:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:859640-859742:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:864875-865030:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:865264-865403:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:867564-867725:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:867825-868029:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:873279-873444:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:874876-875103:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:876013-876154:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:877422-877622:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:880018-880156:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:882574-882737:1:exon

ESCO1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: ESCO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(869544..964586)
location: region:869544-964586:-1
so has part: feature:869544-964586:-1:exon
subclass of: SO_0000010

104655461
type: Gene
SIO_000068: ncbigene

position:869544:-1
position: 869544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964586:-1
position: 964586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869544-964586:-1:exon

ESCO1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055676.1
SIO_010081: ESCO1
so part of: ESCO1
location: complement(join(869544..869601,874241..874352,890589..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937980,938222..938324,949869..949996,964219..964583))
location: region:869544-964583:-1
so has part: feature:964219-964583:-1:exon
so has part: feature:949869-949996:-1:exon
so has part: feature:938222-938324:-1:exon
so has part: feature:935860-937980:-1:exon
so has part: feature:930492-930606:-1:exon
so has part: feature:928345-928405:-1:exon
so has part: feature:926501-926615:-1:exon
so has part: feature:922246-922377:-1:exon
so has part: feature:900483-900572:-1:exon
so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:890589-890689:-1:exon
so has part: feature:874241-874352:-1:exon
so has part: feature:869544-869601:-1:exon

position:964583:-1
position: 964583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964219-964583:-1:exon

position:964219:-1
position: 964219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:949869-949996:-1:exon

position:949869:-1
position: 949869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949996:-1
position: 949996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:938222-938324:-1:exon

position:938222:-1
position: 938222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938324:-1
position: 938324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:935860-937980:-1:exon

position:935860:-1
position: 935860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937980:-1
position: 937980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:930492-930606:-1:exon

position:930492:-1
position: 930492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930606:-1
position: 930606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:928345-928405:-1:exon

position:928345:-1
position: 928345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928405:-1
position: 928405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:926501-926615:-1:exon

position:926501:-1
position: 926501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926615:-1
position: 926615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:922246-922377:-1:exon

position:922246:-1
position: 922246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922377:-1
position: 922377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:900483-900572:-1:exon

position:900483:-1
position: 900483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900572:-1
position: 900572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:896551-896694:-1:exon

position:896551:-1
position: 896551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896694:-1
position: 896694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:892676-892863:-1:exon

position:892676:-1
position: 892676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892863:-1
position: 892863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:890589-890689:-1:exon

position:890589:-1
position: 890589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890689:-1
position: 890689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:874241-874352:-1:exon

position:874241:-1
position: 874241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874352:-1
position: 874352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:869544-869601:-1:exon

position:869601:-1
position: 869601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESCO1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055677.1
SIO_010081: ESCO1
so part of: ESCO1
location: complement(join(869586..869622,874241..874352,890589..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937980,938222..938324,949869..949996,964219..964583))
location: region:869586-964583:-1
so has part: feature:964219-964583:-1:exon
so has part: feature:949869-949996:-1:exon
so has part: feature:938222-938324:-1:exon
so has part: feature:935860-937980:-1:exon
so has part: feature:930492-930606:-1:exon
so has part: feature:928345-928405:-1:exon
so has part: feature:926501-926615:-1:exon
so has part: feature:922246-922377:-1:exon
so has part: feature:900483-900572:-1:exon
so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:890589-890689:-1:exon
so has part: feature:874241-874352:-1:exon
so has part: feature:869586-869622:-1:exon

position:869586:-1
position: 869586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964219-964583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949869-949996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938222-938324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935860-937980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930492-930606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928345-928405:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926501-926615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:922246-922377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900483-900572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896551-896694:-1:exon

urn:…
SIO_000300: 11
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position:869622:-1
position: 869622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESCO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030925877.1
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(873903..874352,890589..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937980,938222..938324,949869..949996,964219..964583))
location: region:873903-964583:-1
so has part: feature:964219-964583:-1:exon
so has part: feature:949869-949996:-1:exon
so has part: feature:938222-938324:-1:exon
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so has part: feature:930492-930606:-1:exon
so has part: feature:928345-928405:-1:exon
so has part: feature:926501-926615:-1:exon
so has part: feature:922246-922377:-1:exon
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so has part: feature:892676-892863:-1:exon
so has part: feature:890589-890689:-1:exon
so has part: feature:873903-874352:-1:exon

position:873903:-1
position: 873903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 13
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ESCO1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055678.1
SIO_010081: ESCO1
so part of: ESCO1
location: complement(join(874297..874352,877367..877699,890589..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937980,938222..938324,949869..949996,964219..964583))
location: region:874297-964583:-1
so has part: feature:964219-964583:-1:exon
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position:874297:-1
position: 874297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 12
SIO_000628: feature:890589-890689:-1:exon

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SIO_000300: 13
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position:877367:-1
position: 877367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877699:-1
position: 877699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:874297-874352:-1:exon

ESCO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ESCO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyltransferase ESCO1 isoform X2
translation: MSIQEKSKENSSKVTKKSEDKNSETEIQDSQKNLAKKSGPKETTKSQAKSSSESKIHQPELETRMSTRSSKAAFSDKATKSINKNTVTVRGHSQESTKKKLSQKKFVHENPKANEQLNRRSQRLRQLTEVSRRSLRSREIQGQVQAVKQSLPPTKKEQCSSTQSKSSKTSQKHVKRKVLEVKPDSKEDENLVINEVIDSPKGKKRKVEHQTACACSSQCVQGSEKCPQKTPRKEEAKPVPVTSEVKRSKMAASVVSKKNEIKKSVHTQVNTNTTLPKSPQPSVPEQSDNDLEQAGKSKRGSILQLCEEIAGEIESDNVEVKKESSQMESVKEEKPTEIKLEETSVERQILHQKETNQDVQCNRFFPSRKTKPVKCILNGISSSAKKNSNWTKIKLSKFNSVQHNKLDSQVSPKLGLLRTSFSPPALEMHHQVTQSTFLGTKPHDGNITCQQEEMKETNSQEVKINDITVEINKTTERAPENCHLANEIKPSDPPLDNQMKHSFDSASNKNFSQCLESKLENSPVENVTAVSTLLSQAKIDTGENKFPGSAPQQQSILNNQTSKSSDNRETPRNYSLPKCNSHLEITIPKDLKLKEAEKTDEKQLIIDAGQKRFGAVSCNVCGMLYTASNPEDETQHLLFHNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMVDNDLGFQQAPLMCYSRTKTLLFISNDKKVVGCLIAEHIQWGYRVIEEKLPVIRSEEEKVRFERQKAWCCSTLPEPAICGISRIWVFSMMRRKKIASRMIECLRSNFIYGSYLSKEEIAFSDPTPDGKLFATQYCGTDAPDRHPLAM
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(874321..874352,890589..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937386))
location: region:874321-937386:-1
so has part: feature:935860-937386:-1:exon
so has part: feature:930492-930606:-1:exon
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so has part: feature:922246-922377:-1:exon
so has part: feature:900483-900572:-1:exon
so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:890589-890689:-1:exon
so has part: feature:874321-874352:-1:exon

XP_030781737.1
type: Protein
SIO_000068: ncbiprotein

position:874321:-1
position: 874321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937386:-1
position: 937386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000300: 2
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urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:874321-874352:-1:exon

ESCO1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055675.1
SIO_010081: ESCO1
so part of: ESCO1
location: complement(join(874337..874352,886918..887181,890589..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937980,938222..938324,949869..949996,964219..964583))
location: region:874337-964583:-1
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so has part: feature:890589-890689:-1:exon
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position:874337:-1
position: 874337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964219-964583:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 8
SIO_000628: feature:922246-922377:-1:exon

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SIO_000628: feature:900483-900572:-1:exon

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SIO_000300: 13
SIO_000628: feature:886918-887181:-1:exon

position:886918:-1
position: 886918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887181:-1
position: 887181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:874337-874352:-1:exon

ESCO1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 79 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_746974.2
SIO_010081: ESCO1
so part of: ESCO1
location: complement(join(889758..890689,892676..892863,896551..896694,900483..900572,901129..901252,922246..922377,926501..926615,928345..928405,930492..930606,935860..937980,938222..938324,949869..949996,964219..964586))
location: region:889758-964586:-1
so has part: feature:964219-964586:-1:exon
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so has part: feature:935860-937980:-1:exon
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so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:889758-890689:-1:exon

position:889758:-1
position: 889758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964219-964586:-1:exon

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SIO_000300: 2
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SIO_000300: 9
SIO_000628: feature:901129-901252:-1:exon

position:901129:-1
position: 901129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901252:-1
position: 901252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
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SIO_000628: feature:892676-892863:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:889758-890689:-1:exon

ESCO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 78 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_010354885.2
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(889758..890689,892676..892863,896551..896694,922246..922377,926501..926615,928345..928405,930492..930606,935860..937980,938222..938324,949869..949996,964219..964583))
location: region:889758-964583:-1
so has part: feature:964219-964583:-1:exon
so has part: feature:949869-949996:-1:exon
so has part: feature:938222-938324:-1:exon
so has part: feature:935860-937980:-1:exon
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so has part: feature:896551-896694:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:964219-964583:-1:exon

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SIO_000300: 2
SIO_000628: feature:949869-949996:-1:exon

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SIO_000300: 3
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SIO_000300: 4
SIO_000628: feature:935860-937980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930492-930606:-1:exon

urn:…
SIO_000300: 6
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SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:922246-922377:-1:exon

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SIO_000628: feature:896551-896694:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892676-892863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:889758-890689:-1:exon

ESCO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 52 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010354883.2
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(889758..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937571,938222..938324,949869..949996,964219..964582))
location: region:889758-964582:-1
so has part: feature:964219-964582:-1:exon
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position:964582:-1
position: 964582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964219-964582:-1:exon

urn:…
SIO_000300: 2
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SIO_000628: feature:938222-938324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935860-937571:-1:exon

position:937571:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:930492-930606:-1:exon

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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:926501-926615:-1:exon

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SIO_000300: 8
SIO_000628: feature:922246-922377:-1:exon

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SIO_000300: 9
SIO_000628: feature:900483-900572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896551-896694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892676-892863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:889758-890689:-1:exon

ESCO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 85 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010354882.2
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(889758..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937980,938222..938324,949869..949996,964219..964582))
location: region:889758-964582:-1
so has part: feature:964219-964582:-1:exon
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so has part: feature:935860-937980:-1:exon
so has part: feature:930492-930606:-1:exon
so has part: feature:928345-928405:-1:exon
so has part: feature:926501-926615:-1:exon
so has part: feature:922246-922377:-1:exon
so has part: feature:900483-900572:-1:exon
so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:889758-890689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:964219-964582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949869-949996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938222-938324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935860-937980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930492-930606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928345-928405:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926501-926615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:922246-922377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900483-900572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896551-896694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892676-892863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:889758-890689:-1:exon

ESCO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ESCO1
product: establishment of sister chromatid cohesion N-acetyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 61 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030925876.1
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(889758..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937980,938222..938324,949869..949996,964011..964582))
location: region:889758-964582:-1
so has part: feature:964011-964582:-1:exon
so has part: feature:949869-949996:-1:exon
so has part: feature:938222-938324:-1:exon
so has part: feature:935860-937980:-1:exon
so has part: feature:930492-930606:-1:exon
so has part: feature:928345-928405:-1:exon
so has part: feature:926501-926615:-1:exon
so has part: feature:922246-922377:-1:exon
so has part: feature:900483-900572:-1:exon
so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:889758-890689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:964011-964582:-1:exon

position:964011:-1
position: 964011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:949869-949996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:938222-938324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935860-937980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930492-930606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:928345-928405:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926501-926615:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:922246-922377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900483-900572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896551-896694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892676-892863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:889758-890689:-1:exon

ESCO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ESCO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyltransferase ESCO1 isoform X3
translation: MSIQEKSKENSSKVTKKSEDKNSETEIQDSQKNLAKKSGPKETTKSQAKSSSESKIHQPELETRMSTRSSKAAFSDKATKSINKNTVTVRGHSQESTKKKLSQKKFVHENPKANEQLNRRSQRLRQLTEVSRRSLRSREIQGQVQAVKQSLPPTKKEQCSSTQSKSSKTSQKHVKRKVLEVKPDSKEDENLVINEVIDSPKGKKRKVEHQTACACSSQCVQGSEKCPQKTPRKEEAKPVPVTSEVKRSKMAASVVSKKNEIKKSVHTQVNTNTTLPKSPQPSVPEQSDNDLEQAGKSKRGSILQLCEEIAGEIESDNVEVKKESSQMESVKEEKPTEIKLEETSVERQILHQKETNQDVQCNRFFPSRKTKPVKCILNGISSSAKKNSNWTKIKLSKFNSVQHNKLDSQVSPKLGLLRTSFSPPALEMHHQVTQSTFLGTKPHDGNITCQQEEMKETNSQEVKINDITVEINKTTERAPENCHLANEIKPSDPPLDNQMKHSFDSASNKNFSQCLESKLENSPVENVTAVSTLLSQAKIDTGENKFPGSAPQQQSILNNQTSKSSDNRETPRNYSLPKCNSHLEITIPKDLKLKEAEKTDEKQLIIDAGQKRFGAVSCNVCGMLYTASNPEDETQHLLFHNQFISAVKYVVDEIREMVDNDLGFQQAPLMCYSRTKTLLFISNDKKVVGCLIAEHIQWGYRVIEEKLPVIRSEEEKVRFERQKAWCCSTLPEPAICGISRIWVFSMMRRKKIASRMIECLRSNFIYGSYLSKEEIAFSDPTPDGKLFATQYCGTGQFLVYNFINGQNST
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(890542..890689,892676..892863,896551..896694,922246..922377,926501..926615,928345..928405,930492..930606,935860..937386))
location: region:890542-937386:-1
so has part: feature:935860-937386:-1:exon
so has part: feature:930492-930606:-1:exon
so has part: feature:928345-928405:-1:exon
so has part: feature:926501-926615:-1:exon
so has part: feature:922246-922377:-1:exon
so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:890542-890689:-1:exon

XP_010353187.2
type: Protein
SIO_000068: ncbiprotein

position:890542:-1
position: 890542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935860-937386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:930492-930606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928345-928405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926501-926615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922246-922377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896551-896694:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892676-892863:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890542-890689:-1:exon

ESCO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ESCO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyltransferase ESCO1 isoform X1
translation: MSIQEKSKENSSKVTKKSEDKNSETEIQDSQKNLAKKSGPKETTKSQAKSSSESKIHQPELETRMSTRSSKAAFSDKATKSINKNTVTVRGHSQESTKKKLSQKKFVHENPKANEQLNRRSQRLRQLTEVSRRSLRSREIQGQVQAVKQSLPPTKKEQCSSTQSKSSKTSQKHVKRKVLEVKPDSKEDENLVINEVIDSPKGKKRKVEHQTACACSSQCVQGSEKCPQKTPRKEEAKPVPVTSEVKRSKMAASVVSKKNEIKKSVHTQVNTNTTLPKSPQPSVPEQSDNDLEQAGKSKRGSILQLCEEIAGEIESDNVEVKKESSQMESVKEEKPTEIKLEETSVERQILHQKETNQDVQCNRFFPSRKTKPVKCILNGISSSAKKNSNWTKIKLSKFNSVQHNKLDSQVSPKLGLLRTSFSPPALEMHHQVTQSTFLGTKPHDGNITCQQEEMKETNSQEVKINDITVEINKTTERAPENCHLANEIKPSDPPLDNQMKHSFDSASNKNFSQCLESKLENSPVENVTAVSTLLSQAKIDTGENKFPGSAPQQQSILNNQTSKSSDNRETPRNYSLPKCNSHLEITIPKDLKLKEAEKTDEKQLIIDAGQKRFGAVSCNVCGMLYTASNPEDETQHLLFHNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMVDNDLGFQQAPLMCYSRTKTLLFISNDKKVVGCLIAEHIQWGYRVIEEKLPVIRSEEEKVRFERQKAWCCSTLPEPAICGISRIWVFSMMRRKKIASRMIECLRSNFIYGSYLSKEEIAFSDPTPDGKLFATQYCGTGQFLVYNFINGQNST
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(890542..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937386))
location: region:890542-937386:-1
so has part: feature:935860-937386:-1:exon
so has part: feature:930492-930606:-1:exon
so has part: feature:928345-928405:-1:exon
so has part: feature:926501-926615:-1:exon
so has part: feature:922246-922377:-1:exon
so has part: feature:900483-900572:-1:exon
so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:890542-890689:-1:exon

XP_010353184.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:935860-937386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:930492-930606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928345-928405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926501-926615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922246-922377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:900483-900572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896551-896694:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892676-892863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890542-890689:-1:exon

ESCO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ESCO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyltransferase ESCO1 isoform X1
translation: MSIQEKSKENSSKVTKKSEDKNSETEIQDSQKNLAKKSGPKETTKSQAKSSSESKIHQPELETRMSTRSSKAAFSDKATKSINKNTVTVRGHSQESTKKKLSQKKFVHENPKANEQLNRRSQRLRQLTEVSRRSLRSREIQGQVQAVKQSLPPTKKEQCSSTQSKSSKTSQKHVKRKVLEVKPDSKEDENLVINEVIDSPKGKKRKVEHQTACACSSQCVQGSEKCPQKTPRKEEAKPVPVTSEVKRSKMAASVVSKKNEIKKSVHTQVNTNTTLPKSPQPSVPEQSDNDLEQAGKSKRGSILQLCEEIAGEIESDNVEVKKESSQMESVKEEKPTEIKLEETSVERQILHQKETNQDVQCNRFFPSRKTKPVKCILNGISSSAKKNSNWTKIKLSKFNSVQHNKLDSQVSPKLGLLRTSFSPPALEMHHQVTQSTFLGTKPHDGNITCQQEEMKETNSQEVKINDITVEINKTTERAPENCHLANEIKPSDPPLDNQMKHSFDSASNKNFSQCLESKLENSPVENVTAVSTLLSQAKIDTGENKFPGSAPQQQSILNNQTSKSSDNRETPRNYSLPKCNSHLEITIPKDLKLKEAEKTDEKQLIIDAGQKRFGAVSCNVCGMLYTASNPEDETQHLLFHNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMVDNDLGFQQAPLMCYSRTKTLLFISNDKKVVGCLIAEHIQWGYRVIEEKLPVIRSEEEKVRFERQKAWCCSTLPEPAICGISRIWVFSMMRRKKIASRMIECLRSNFIYGSYLSKEEIAFSDPTPDGKLFATQYCGTGQFLVYNFINGQNST
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(890542..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937386))
location: region:890542-937386:-1
so has part: feature:935860-937386:-1:exon
so has part: feature:930492-930606:-1:exon
so has part: feature:928345-928405:-1:exon
so has part: feature:926501-926615:-1:exon
so has part: feature:922246-922377:-1:exon
so has part: feature:900483-900572:-1:exon
so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:890542-890689:-1:exon

XP_030781736.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:935860-937386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:930492-930606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928345-928405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926501-926615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922246-922377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:900483-900572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896551-896694:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892676-892863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890542-890689:-1:exon

ESCO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ESCO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetyltransferase ESCO1 isoform X1
translation: MSIQEKSKENSSKVTKKSEDKNSETEIQDSQKNLAKKSGPKETTKSQAKSSSESKIHQPELETRMSTRSSKAAFSDKATKSINKNTVTVRGHSQESTKKKLSQKKFVHENPKANEQLNRRSQRLRQLTEVSRRSLRSREIQGQVQAVKQSLPPTKKEQCSSTQSKSSKTSQKHVKRKVLEVKPDSKEDENLVINEVIDSPKGKKRKVEHQTACACSSQCVQGSEKCPQKTPRKEEAKPVPVTSEVKRSKMAASVVSKKNEIKKSVHTQVNTNTTLPKSPQPSVPEQSDNDLEQAGKSKRGSILQLCEEIAGEIESDNVEVKKESSQMESVKEEKPTEIKLEETSVERQILHQKETNQDVQCNRFFPSRKTKPVKCILNGISSSAKKNSNWTKIKLSKFNSVQHNKLDSQVSPKLGLLRTSFSPPALEMHHQVTQSTFLGTKPHDGNITCQQEEMKETNSQEVKINDITVEINKTTERAPENCHLANEIKPSDPPLDNQMKHSFDSASNKNFSQCLESKLENSPVENVTAVSTLLSQAKIDTGENKFPGSAPQQQSILNNQTSKSSDNRETPRNYSLPKCNSHLEITIPKDLKLKEAEKTDEKQLIIDAGQKRFGAVSCNVCGMLYTASNPEDETQHLLFHNQFISAVKYVGWKKERILAEYPDGRIIMVLPEDPKYALKKVDEIREMVDNDLGFQQAPLMCYSRTKTLLFISNDKKVVGCLIAEHIQWGYRVIEEKLPVIRSEEEKVRFERQKAWCCSTLPEPAICGISRIWVFSMMRRKKIASRMIECLRSNFIYGSYLSKEEIAFSDPTPDGKLFATQYCGTGQFLVYNFINGQNST
SIO_010081: ESCO1
subclass of: SO_0000673
so part of: ESCO1
location: complement(join(890542..890689,892676..892863,896551..896694,900483..900572,922246..922377,926501..926615,928345..928405,930492..930606,935860..937386))
location: region:890542-937386:-1
so has part: feature:935860-937386:-1:exon
so has part: feature:930492-930606:-1:exon
so has part: feature:928345-928405:-1:exon
so has part: feature:926501-926615:-1:exon
so has part: feature:922246-922377:-1:exon
so has part: feature:900483-900572:-1:exon
so has part: feature:896551-896694:-1:exon
so has part: feature:892676-892863:-1:exon
so has part: feature:890542-890689:-1:exon

XP_010353185.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:935860-937386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:930492-930606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:928345-928405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:926501-926615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:922246-922377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:900483-900572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896551-896694:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:892676-892863:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:890542-890689:-1:exon

SNRPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: SNRPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 976256..992606
location: region:976256-992606:1
so has part: feature:976256-992606:1:exon
subclass of: SO_0000010

104655460
type: Gene
SIO_000068: ncbigene

position:976256:1
position: 976256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992606:1
position: 992606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976256-992606:1:exon

SNRPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: SNRPD1
product: small nuclear ribonucleoprotein D1 polypeptide
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 172 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010354881.2
SIO_010081: SNRPD1
subclass of: SO_0000673
so part of: SNRPD1
location: join(976256..976420,985663..985739,987346..987537,991417..992606)
location: region:976256-992606:1
so has part: feature:976256-976420:1:exon
so has part: feature:985663-985739:1:exon
so has part: feature:987346-987537:1:exon
so has part: feature:991417-992606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:976256-976420:1:exon

position:976420:1
position: 976420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:985663-985739:1:exon

position:985663:1
position: 985663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985739:1
position: 985739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:987346-987537:1:exon

position:987346:1
position: 987346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987537:1
position: 987537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:991417-992606:1:exon

position:991417:1
position: 991417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNRPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: SNRPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small nuclear ribonucleoprotein Sm D1
translation: MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
SIO_010081: SNRPD1
subclass of: SO_0000673
so part of: SNRPD1
location: join(976407..976420,985663..985739,987346..987537,991417..991493)
location: region:976407-991493:1
so has part: feature:976407-976420:1:exon
so has part: feature:985663-985739:1:exon
so has part: feature:987346-987537:1:exon
so has part: feature:991417-991493:1:exon

XP_010353183.1
type: Protein
SIO_000068: ncbiprotein

position:976407:1
position: 976407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991493:1
position: 991493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976407-976420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985663-985739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:987346-987537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:991417-991493:1:exon

ABHD3
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: ABHD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1016120..1062848)
location: region:1016120-1062848:-1
so has part: feature:1016120-1062848:-1:exon
subclass of: SO_0000010

104655459
type: Gene
SIO_000068: ncbigene

position:1016120:-1
position: 1016120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062848:-1
position: 1062848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016120-1062848:-1:exon

ABHD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ABHD3
product: abhydrolase domain containing 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 116 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010354880.2
SIO_010081: ABHD3
subclass of: SO_0000673
so part of: ABHD3
location: complement(join(1016120..1016979,1023984..1024149,1024228..1024276,1026947..1027120,1031788..1031900,1049507..1049552,1060392..1060575,1061663..1061826,1062568..1062848))
location: region:1016120-1062848:-1
so has part: feature:1062568-1062848:-1:exon
so has part: feature:1061663-1061826:-1:exon
so has part: feature:1060392-1060575:-1:exon
so has part: feature:1049507-1049552:-1:exon
so has part: feature:1031788-1031900:-1:exon
so has part: feature:1026947-1027120:-1:exon
so has part: feature:1024228-1024276:-1:exon
so has part: feature:1023984-1024149:-1:exon
so has part: feature:1016120-1016979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062568-1062848:-1:exon

position:1062568:-1
position: 1062568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061663-1061826:-1:exon

position:1061663:-1
position: 1061663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061826:-1
position: 1061826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1060392-1060575:-1:exon

position:1060392:-1
position: 1060392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060575:-1
position: 1060575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1049507-1049552:-1:exon

position:1049507:-1
position: 1049507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049552:-1
position: 1049552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1031788-1031900:-1:exon

position:1031788:-1
position: 1031788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031900:-1
position: 1031900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1026947-1027120:-1:exon

position:1026947:-1
position: 1026947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027120:-1
position: 1027120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1024228-1024276:-1:exon

position:1024228:-1
position: 1024228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024276:-1
position: 1024276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1023984-1024149:-1:exon

position:1023984:-1
position: 1023984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024149:-1
position: 1024149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1016120-1016979:-1:exon

position:1016979:-1
position: 1016979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABHD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ABHD3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: phospholipase ABHD3
translation: MQRLAMDLRMLSRELSLYLEHQARVGFFGSGVGLSLILGFSVAYAFYYLSSIAKKPQLVTGGESFSRFLQDHCPVVTETYYPTVWCWESRGQTLLRPFITSKPPVEYRNELIKTADGGQISLDWFDNDNSTCYMDASSRPTILLLPGLTGTSKESYILHMIHLSEELGYRCVVFNNRGVAGENLLTPRTYCCANTEDLETVIHHVHSLYPSAPFLAAGVSMGGMLLLNYLGKIGSKTPLMAAATFSVGWNTFACSESLEKPLNWLLFNYYLTTCLQSSVNKHRHMFVKQVDMDHVMKAKSIREFDKRFTSVMFGYRTIDDYYTDASPSRRLTSVGIPVLCLNSVDDVFSPSHAIPIETAKQNPNVALVLTSYGGHIGFLEGIWPRQSTYMDRVFKQFVQAMVEHGHELS
SIO_010081: ABHD3
subclass of: SO_0000673
so part of: ABHD3
location: complement(join(1016807..1016979,1023984..1024149,1024228..1024276,1026947..1027120,1031788..1031900,1049507..1049552,1060392..1060575,1061663..1061826,1062568..1062729))
location: region:1016807-1062729:-1
so has part: feature:1062568-1062729:-1:exon
so has part: feature:1061663-1061826:-1:exon
so has part: feature:1060392-1060575:-1:exon
so has part: feature:1049507-1049552:-1:exon
so has part: feature:1031788-1031900:-1:exon
so has part: feature:1026947-1027120:-1:exon
so has part: feature:1024228-1024276:-1:exon
so has part: feature:1023984-1024149:-1:exon
so has part: feature:1016807-1016979:-1:exon

XP_010353182.1
type: Protein
SIO_000068: ncbiprotein

position:1016807:-1
position: 1016807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062729:-1
position: 1062729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062568-1062729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061663-1061826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1060392-1060575:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1049507-1049552:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1031788-1031900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1026947-1027120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1024228-1024276:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1023984-1024149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1016807-1016979:-1:exon

LOC115895587
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895587
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1066818..1066984)
location: region:1066818-1066984:-1
so has part: feature:1066818-1066984:-1:exon
subclass of: SO_0000578

115895587
type: Gene
SIO_000068: ncbigene

position:1066818:-1
position: 1066818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066984:-1
position: 1066984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066818-1066984:-1:exon

LOC115895587
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snoRNA
gene: LOC115895587
product: small nucleolar RNA SNORA81
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01241
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055775.1
SIO_010081: LOC115895587
subclass of: SO_0000673
so part of: LOC115895587
location: complement(1066818..1066984)
location: region:1066818-1066984:-1
so has part: feature:1066818-1066984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1066818-1066984:-1:exon

MIB1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: MIB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1096224..1232814
location: region:1096224-1232814:1
so has part: feature:1096224-1232814:1:exon
subclass of: SO_0000010

104655458
type: Gene
SIO_000068: ncbigene

position:1096224:1
position: 1096224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232814:1
position: 1232814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096224-1232814:1:exon

MIB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: MIB1
product: mindbomb E3 ubiquitin protein ligase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 347 ESTs, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010354878.2
SIO_010081: MIB1
subclass of: SO_0000673
so part of: MIB1
location: join(1096224..1096672,1122067..1122238,1124901..1125030,1130226..1130330,1135259..1135325,1136641..1136845,1152472..1152655,1157676..1157820,1159788..1159921,1164179..1164286,1175818..1176015,1180020..1180171,1201650..1201782,1205830..1205916,1206780..1206941,1209628..1209809,1211914..1212106,1216177..1216255,1219812..1219925,1221212..1221312,1227160..1232814)
location: region:1096224-1232814:1
so has part: feature:1096224-1096672:1:exon
so has part: feature:1122067-1122238:1:exon
so has part: feature:1124901-1125030:1:exon
so has part: feature:1130226-1130330:1:exon
so has part: feature:1135259-1135325:1:exon
so has part: feature:1136641-1136845:1:exon
so has part: feature:1152472-1152655:1:exon
so has part: feature:1157676-1157820:1:exon
so has part: feature:1159788-1159921:1:exon
so has part: feature:1164179-1164286:1:exon
so has part: feature:1175818-1176015:1:exon
so has part: feature:1180020-1180171:1:exon
so has part: feature:1201650-1201782:1:exon
so has part: feature:1205830-1205916:1:exon
so has part: feature:1206780-1206941:1:exon
so has part: feature:1209628-1209809:1:exon
so has part: feature:1211914-1212106:1:exon
so has part: feature:1216177-1216255:1:exon
so has part: feature:1219812-1219925:1:exon
so has part: feature:1221212-1221312:1:exon
so has part: feature:1227160-1232814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1096224-1096672:1:exon

position:1096672:1
position: 1096672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1122067-1122238:1:exon

position:1122067:1
position: 1122067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122238:1
position: 1122238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1124901-1125030:1:exon

position:1124901:1
position: 1124901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125030:1
position: 1125030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1130226-1130330:1:exon

position:1130226:1
position: 1130226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130330:1
position: 1130330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1135259-1135325:1:exon

position:1135259:1
position: 1135259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135325:1
position: 1135325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1136641-1136845:1:exon

position:1136641:1
position: 1136641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136845:1
position: 1136845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1152472-1152655:1:exon

position:1152472:1
position: 1152472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152655:1
position: 1152655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1157676-1157820:1:exon

position:1157676:1
position: 1157676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157820:1
position: 1157820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1159788-1159921:1:exon

position:1159788:1
position: 1159788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159921:1
position: 1159921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1164179-1164286:1:exon

position:1164179:1
position: 1164179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164286:1
position: 1164286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1175818-1176015:1:exon

position:1175818:1
position: 1175818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176015:1
position: 1176015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1180020-1180171:1:exon

position:1180020:1
position: 1180020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180171:1
position: 1180171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1201650-1201782:1:exon

position:1201650:1
position: 1201650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201782:1
position: 1201782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1205830-1205916:1:exon

position:1205830:1
position: 1205830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205916:1
position: 1205916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1206780-1206941:1:exon

position:1206780:1
position: 1206780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1206941:1
position: 1206941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1209628-1209809:1:exon

position:1209628:1
position: 1209628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209809:1
position: 1209809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1211914-1212106:1:exon

position:1211914:1
position: 1211914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212106:1
position: 1212106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1216177-1216255:1:exon

position:1216177:1
position: 1216177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216255:1
position: 1216255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1219812-1219925:1:exon

position:1219812:1
position: 1219812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219925:1
position: 1219925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1221212-1221312:1:exon

position:1221212:1
position: 1221212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221312:1
position: 1221312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1227160-1232814:1:exon

position:1227160:1
position: 1227160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MIB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: MIB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MIB1
translation: MSNSRNNRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANYRCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGNRNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPSGNRWTFNPAVLTKANIVRSGEAAQGAEGGTSQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVSKVASAGSAISNASGERLSQLLKKLFETQESGDLNEELVKAAANGDVAKVEDLLKRPDVDVNGQCAGHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEALRHHTLSQLRQLQDMQDVGKVDAAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLSIRNKKGQSPLDLCPDPNLCKALAKCHKEKVSGQVGSRSPSMISNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCANLMKKCVQCRAVVERRVPFIMCCGGKSSEDATDDISSGNIPVLQKDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY
SIO_010081: MIB1
subclass of: SO_0000673
so part of: MIB1
location: join(1096444..1096672,1122067..1122238,1124901..1125030,1130226..1130330,1135259..1135325,1136641..1136845,1152472..1152655,1157676..1157820,1159788..1159921,1164179..1164286,1175818..1176015,1180020..1180171,1201650..1201782,1205830..1205916,1206780..1206941,1209628..1209809,1211914..1212106,1216177..1216255,1219812..1219925,1221212..1221312,1227160..1227300)
location: region:1096444-1227300:1
so has part: feature:1096444-1096672:1:exon
so has part: feature:1122067-1122238:1:exon
so has part: feature:1124901-1125030:1:exon
so has part: feature:1130226-1130330:1:exon
so has part: feature:1135259-1135325:1:exon
so has part: feature:1136641-1136845:1:exon
so has part: feature:1152472-1152655:1:exon
so has part: feature:1157676-1157820:1:exon
so has part: feature:1159788-1159921:1:exon
so has part: feature:1164179-1164286:1:exon
so has part: feature:1175818-1176015:1:exon
so has part: feature:1180020-1180171:1:exon
so has part: feature:1201650-1201782:1:exon
so has part: feature:1205830-1205916:1:exon
so has part: feature:1206780-1206941:1:exon
so has part: feature:1209628-1209809:1:exon
so has part: feature:1211914-1212106:1:exon
so has part: feature:1216177-1216255:1:exon
so has part: feature:1219812-1219925:1:exon
so has part: feature:1221212-1221312:1:exon
so has part: feature:1227160-1227300:1:exon

XP_010353180.1
type: Protein
SIO_000068: ncbiprotein

position:1096444:1
position: 1096444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227300:1
position: 1227300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096444-1096672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122067-1122238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124901-1125030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1130226-1130330:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135259-1135325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1136641-1136845:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1152472-1152655:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1157676-1157820:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1159788-1159921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1164179-1164286:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1175818-1176015:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1180020-1180171:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1201650-1201782:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1205830-1205916:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1206780-1206941:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1209628-1209809:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1211914-1212106:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1216177-1216255:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1219812-1219925:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1221212-1221312:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1227160-1227300:1:exon

LOC115895551
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895551
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1178155..1178358
location: region:1178155-1178358:1
so has part: feature:1178155-1178358:1:exon
subclass of: SO_0000578

115895551
type: Gene
SIO_000068: ncbigene

position:1178155:1
position: 1178155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178358:1
position: 1178358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1178155-1178358:1:exon

LOC115895551
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snoRNA
gene: LOC115895551
product: small nucleolar RNA SNORA73 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00045
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055747.1
SIO_010081: LOC115895551
subclass of: SO_0000673
so part of: LOC115895551
location: 1178155..1178358
location: region:1178155-1178358:1
so has part: feature:1178155-1178358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178155-1178358:1:exon

LOC115895486
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895486
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1217649..1219013)
location: region:1217649-1219013:-1
so has part: feature:1217649-1219013:-1:exon

115895486
type: Gene
SIO_000068: ncbigene

position:1217649:-1
position: 1217649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219013:-1
position: 1219013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217649-1219013:-1:exon

LOC115895486
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895486
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC115895486
subclass of: SO_0000673
so part of: LOC115895486
location: complement(1217649..1218035)
location: region:1217649-1218035:-1
so has part: feature:1217649-1218035:-1:exon

position:1218035:-1
position: 1218035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217649-1218035:-1:exon

LOC115895486
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895486
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC115895486
subclass of: SO_0000673
so part of: LOC115895486
location: complement(1218975..1219013)
location: region:1218975-1219013:-1
so has part: feature:1218975-1219013:-1:exon

position:1218975:-1
position: 1218975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1218975-1219013:-1:exon

LOC115895630
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895630
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1249512..1249624
location: region:1249512-1249624:1
so has part: feature:1249512-1249624:1:exon

115895630
type: Gene
SIO_000068: ncbigene

position:1249512:1
position: 1249512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249624:1
position: 1249624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1249512-1249624:1:exon

LOC115895630
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895630
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115895630
subclass of: SO_0000673
so part of: LOC115895630
location: 1249512..1249624
location: region:1249512-1249624:1
so has part: feature:1249512-1249624:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1249512-1249624:1:exon

LOC115895555
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895555
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1407154..1407214
location: region:1407154-1407214:1
so has part: feature:1407154-1407214:1:exon
subclass of: SO_0000623

115895555
type: Gene
SIO_000068: ncbigene

position:1407154:1
position: 1407154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407214:1
position: 1407214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407154-1407214:1:exon

LOC115895555
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895555
product: U7 small nuclear RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00066
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055751.1
SIO_010081: LOC115895555
subclass of: SO_0000673
so part of: LOC115895555
location: 1407154..1407214
location: region:1407154-1407214:1
so has part: feature:1407154-1407214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1407154-1407214:1:exon

LOC115895604
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895604
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1420701..1420807)
location: region:1420701-1420807:-1
so has part: feature:1420701-1420807:-1:exon
subclass of: SO_0000623

115895604
type: Gene
SIO_000068: ncbigene

position:1420701:-1
position: 1420701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420807:-1
position: 1420807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420701-1420807:-1:exon

LOC115895604
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895604
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055784.1
SIO_010081: LOC115895604
subclass of: SO_0000673
so part of: LOC115895604
location: complement(1420701..1420807)
location: region:1420701-1420807:-1
so has part: feature:1420701-1420807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1420701-1420807:-1:exon

LOC115895521
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1506248..1532527)
location: region:1506248-1532527:-1
so has part: feature:1506248-1532527:-1:exon
subclass of: SO_0000010

115895521
type: Gene
SIO_000068: ncbigene

position:1506248:-1
position: 1506248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1532527:-1
position: 1532527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506248-1532527:-1:exon

LOC115895521
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC115895521
product: translation initiation factor IF-2-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055725.1
SIO_010081: LOC115895521
so part of: LOC115895521
location: complement(join(1506248..1506269,1508899..1509005,1514891..1514947,1530428..1530545,1531551..1531623,1531906..1532527))
location: region:1506248-1532527:-1
so has part: feature:1531906-1532527:-1:exon
so has part: feature:1531551-1531623:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1514891-1514947:-1:exon
so has part: feature:1508899-1509005:-1:exon
so has part: feature:1506248-1506269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1531906-1532527:-1:exon

position:1531906:-1
position: 1531906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1531551-1531623:-1:exon

position:1531551:-1
position: 1531551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531623:-1
position: 1531623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1530428-1530545:-1:exon

position:1530428:-1
position: 1530428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1530545:-1
position: 1530545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1514891-1514947:-1:exon

position:1514891:-1
position: 1514891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514947:-1
position: 1514947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1508899-1509005:-1:exon

position:1508899:-1
position: 1508899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509005:-1
position: 1509005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1506248-1506269:-1:exon

position:1506269:-1
position: 1506269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895521
product: translation initiation factor IF-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926156.1
SIO_010081: LOC115895521
subclass of: SO_0000673
so part of: LOC115895521
location: complement(join(1528075..1528649,1528774..1529049,1530428..1530545,1531551..1531623,1531906..1532527))
location: region:1528075-1532527:-1
so has part: feature:1531906-1532527:-1:exon
so has part: feature:1531551-1531623:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1528774-1529049:-1:exon
so has part: feature:1528075-1528649:-1:exon

position:1528075:-1
position: 1528075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531906-1532527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1531551-1531623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1530428-1530545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1528774-1529049:-1:exon

position:1528774:-1
position: 1528774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529049:-1
position: 1529049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1528075-1528649:-1:exon

position:1528649:-1
position: 1528649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC115895521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895521
product: translation initiation factor IF-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926155.1
SIO_010081: LOC115895521
subclass of: SO_0000673
so part of: LOC115895521
location: complement(join(1528075..1528649,1528774..1529049,1530428..1530545,1531280..1531398,1531551..1531623,1531906..1532527))
location: region:1528075-1532527:-1
so has part: feature:1531906-1532527:-1:exon
so has part: feature:1531551-1531623:-1:exon
so has part: feature:1531280-1531398:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1528774-1529049:-1:exon
so has part: feature:1528075-1528649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1531906-1532527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1531551-1531623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1531280-1531398:-1:exon

position:1531280:-1
position: 1531280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531398:-1
position: 1531398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1530428-1530545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1528774-1529049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1528075-1528649:-1:exon

LOC115895521
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: LOC115895521
product: translation initiation factor IF-2-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004055726.1
SIO_010081: LOC115895521
so part of: LOC115895521
location: complement(join(1528075..1528649,1528774..1529131,1530428..1530545,1531551..1532527))
location: region:1528075-1532527:-1
so has part: feature:1531551-1532527:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1528774-1529131:-1:exon
so has part: feature:1528075-1528649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1531551-1532527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1530428-1530545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1528774-1529131:-1:exon

position:1529131:-1
position: 1529131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1528075-1528649:-1:exon

LOC115895521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895521
product: translation initiation factor IF-2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926158.1
SIO_010081: LOC115895521
subclass of: SO_0000673
so part of: LOC115895521
location: complement(join(1528075..1528649,1528774..1529131,1530428..1530545,1531322..1531398,1531551..1532527))
location: region:1528075-1532527:-1
so has part: feature:1531551-1532527:-1:exon
so has part: feature:1531322-1531398:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1528774-1529131:-1:exon
so has part: feature:1528075-1528649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1531551-1532527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1531322-1531398:-1:exon

position:1531322:-1
position: 1531322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1530428-1530545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1528774-1529131:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1528075-1528649:-1:exon

LOC115895521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895521
product: translation initiation factor IF-2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926157.1
SIO_010081: LOC115895521
subclass of: SO_0000673
so part of: LOC115895521
location: complement(join(1528075..1528649,1528774..1529131,1530428..1530545,1531280..1531398,1531551..1532527))
location: region:1528075-1532527:-1
so has part: feature:1531551-1532527:-1:exon
so has part: feature:1531280-1531398:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1528774-1529131:-1:exon
so has part: feature:1528075-1528649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1531551-1532527:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1531280-1531398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1530428-1530545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1528774-1529131:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1528075-1528649:-1:exon

LOC115895521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115895521 isoform X1
translation: MVSRDGETSSLSVVSSACNLQGCLRGYPWTLDTPRGPALPAAPQTRQEGALAPALLGQSAGSPPPATSGEGPRRGSVGVPGRSESRPRALRRPGPARRPLARRSPRPTPARRRRPPARRGGGLAAAAHERSPRWHSSPRCLRDLMYSLRRGLLSRPPNDRRKIFPPCFSRSRFKPNKFSY
SIO_010081: LOC115895521
subclass of: SO_0000673
so part of: LOC115895521
location: complement(join(1528559..1528649,1528774..1529049,1530428..1530545,1531280..1531337))
location: region:1528559-1531337:-1
so has part: feature:1531280-1531337:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1528774-1529049:-1:exon
so has part: feature:1528559-1528649:-1:exon

XP_030782015.1
type: Protein
SIO_000068: ncbiprotein

position:1528559:-1
position: 1528559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531337:-1
position: 1531337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531280-1531337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1530428-1530545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1528774-1529049:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1528559-1528649:-1:exon

LOC115895521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115895521 isoform X2
translation: MEKGFHISRVRGRSPTFDVPFALRFPWRVSERISSDRRDPRRLPRETLGQKELFFTRMSAWISLDTRYPPGTCSSRSSADAAGGRAGPGAAGTERGLPAAGHFGGRTAQRQRRGPRAVGIEAPRVAQARPGSEAPRPAQPPADPRAPPAAASTARRWARGGGARKVTAVAFLSALFT
SIO_010081: LOC115895521
subclass of: SO_0000673
so part of: LOC115895521
location: complement(join(1528798..1529049,1530428..1530545,1531551..1531623,1531906..1531996))
location: region:1528798-1531996:-1
so has part: feature:1531906-1531996:-1:exon
so has part: feature:1531551-1531623:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1528798-1529049:-1:exon

XP_030782016.1
type: Protein
SIO_000068: ncbiprotein

position:1528798:-1
position: 1528798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531996:-1
position: 1531996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531906-1531996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1531551-1531623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1530428-1530545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1528798-1529049:-1:exon

LOC115895521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115895521 isoform X4
translation: MVSRDVQGCLRGYPWTLDTPRGPALPAAPQTRQEGALAPALLGQSLNLGKPKTPFRNVRWWRRKLKGRPHPQRGLPAAGHFGGRTAQRQRRGPRAVGIEAPRVAQARPGSEAPRPAQPPADPRAPPAAASTARRWARGGGARKVTAVAFLSALFT
SIO_010081: LOC115895521
subclass of: SO_0000673
so part of: LOC115895521
location: complement(join(1528798..1529131,1530428..1530545,1531322..1531337))
location: region:1528798-1531337:-1
so has part: feature:1531322-1531337:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1528798-1529131:-1:exon

XP_030782018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1531322-1531337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1530428-1530545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1528798-1529131:-1:exon

LOC115895521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC115895521 isoform X3
translation: MVSRDGETSSLSVVSSACNLQGCLRGYPWTLDTPRGPALPAAPQTRQEGALAPALLGQSLNLGKPKTPFRNVRWWRRKLKGRPHPQRGLPAAGHFGGRTAQRQRRGPRAVGIEAPRVAQARPGSEAPRPAQPPADPRAPPAAASTARRWARGGGARKVTAVAFLSALFT
SIO_010081: LOC115895521
subclass of: SO_0000673
so part of: LOC115895521
location: complement(join(1528798..1529131,1530428..1530545,1531280..1531337))
location: region:1528798-1531337:-1
so has part: feature:1531280-1531337:-1:exon
so has part: feature:1530428-1530545:-1:exon
so has part: feature:1528798-1529131:-1:exon

XP_030782017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1531280-1531337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1530428-1530545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1528798-1529131:-1:exon

GATA6
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: GATA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1532664..1565707
location: region:1532664-1565707:1
so has part: feature:1532664-1565707:1:exon
subclass of: SO_0000010

104655477
type: Gene
SIO_000068: ncbigene

position:1532664:1
position: 1532664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565707:1
position: 1565707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1532664-1565707:1:exon

GATA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: GATA6
product: GATA binding protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 106 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926153.1
SIO_010081: GATA6
subclass of: SO_0000673
so part of: GATA6
location: join(1532664..1532921,1534329..1535500,1540191..1540357,1544698..1544823,1545997..1546084,1546180..1546283,1564364..1565707)
location: region:1532664-1565707:1
so has part: feature:1532664-1532921:1:exon
so has part: feature:1534329-1535500:1:exon
so has part: feature:1540191-1540357:1:exon
so has part: feature:1544698-1544823:1:exon
so has part: feature:1545997-1546084:1:exon
so has part: feature:1546180-1546283:1:exon
so has part: feature:1564364-1565707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1532664-1532921:1:exon

position:1532921:1
position: 1532921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1534329-1535500:1:exon

position:1534329:1
position: 1534329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1535500:1
position: 1535500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1540191-1540357:1:exon

position:1540191:1
position: 1540191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1540357:1
position: 1540357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1544698-1544823:1:exon

position:1544698:1
position: 1544698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1544823:1
position: 1544823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1545997-1546084:1:exon

position:1545997:1
position: 1545997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546084:1
position: 1546084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1546180-1546283:1:exon

position:1546180:1
position: 1546180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546283:1
position: 1546283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1564364-1565707:1:exon

position:1564364:1
position: 1564364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GATA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: GATA6
product: GATA binding protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 95 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926154.1
SIO_010081: GATA6
subclass of: SO_0000673
so part of: GATA6
location: join(1533467..1533598,1534329..1535500,1540191..1540357,1544698..1544823,1545997..1546084,1546180..1546283,1564364..1565707)
location: region:1533467-1565707:1
so has part: feature:1533467-1533598:1:exon
so has part: feature:1534329-1535500:1:exon
so has part: feature:1540191-1540357:1:exon
so has part: feature:1544698-1544823:1:exon
so has part: feature:1545997-1546084:1:exon
so has part: feature:1546180-1546283:1:exon
so has part: feature:1564364-1565707:1:exon

position:1533467:1
position: 1533467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1533467-1533598:1:exon

position:1533598:1
position: 1533598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1534329-1535500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1540191-1540357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1544698-1544823:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1545997-1546084:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1546180-1546283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1564364-1565707:1:exon

GATA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: GATA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor GATA-6
translation: MALTDGGWCLPKRFGAAGADTSDSGAFPARDPSTPPSPISSSSSSCSRGGERGPGGASNCGTPQLDTEVAAGPPARSLLLSSYASHPFGVPHGPSAPGVAGPGGNLSSWEDLLLFTDLDQAATASKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGGGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLHSLQSRAGAPLPVPRGPSADLLEDLSESRECVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKPKNINKSKTCSGNSNNSIPMTPTSTSSNSDDCSKNTSPTTQPTASGAGAPVMTGAGESTNPENSELKYSGQDGLYIGVSLASPAEVTSSVRQDSWCALALA
SIO_010081: GATA6
subclass of: SO_0000673
so part of: GATA6
location: join(1534366..1535500,1540191..1540357,1544698..1544823,1545997..1546084,1546180..1546283,1564364..1564531)
location: region:1534366-1564531:1
so has part: feature:1534366-1535500:1:exon
so has part: feature:1540191-1540357:1:exon
so has part: feature:1544698-1544823:1:exon
so has part: feature:1545997-1546084:1:exon
so has part: feature:1546180-1546283:1:exon
so has part: feature:1564364-1564531:1:exon

XP_030782013.1
type: Protein
SIO_000068: ncbiprotein

position:1534366:1
position: 1534366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564531:1
position: 1564531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1534366-1535500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1540191-1540357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1544698-1544823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1545997-1546084:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1546180-1546283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1564364-1564531:1:exon

GATA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: GATA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor GATA-6
translation: MALTDGGWCLPKRFGAAGADTSDSGAFPARDPSTPPSPISSSSSSCSRGGERGPGGASNCGTPQLDTEVAAGPPARSLLLSSYASHPFGVPHGPSAPGVAGPGGNLSSWEDLLLFTDLDQAATASKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAAAAASSPVYVPTTRVGSMLPGLPYHLQGSGSGPANHAGGAGAHPGWPQASADSPPYGGGGGAAGGGAAGPGGAGSAAAHVSARFPYSPSPPMANGAAREPGGYAAAGSGGAGGVSGGGSSLAAMGGREPQYSSLSAARPLNGTYHHHHHHHHHHPSPYSPYVGAPLTPAWPAGPFETPVLHSLQSRAGAPLPVPRGPSADLLEDLSESRECVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRPLIKPQKRVPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKEGIQTRKRKPKNINKSKTCSGNSNNSIPMTPTSTSSNSDDCSKNTSPTTQPTASGAGAPVMTGAGESTNPENSELKYSGQDGLYIGVSLASPAEVTSSVRQDSWCALALA
SIO_010081: GATA6
subclass of: SO_0000673
so part of: GATA6
location: join(1534366..1535500,1540191..1540357,1544698..1544823,1545997..1546084,1546180..1546283,1564364..1564531)
location: region:1534366-1564531:1
so has part: feature:1534366-1535500:1:exon
so has part: feature:1540191-1540357:1:exon
so has part: feature:1544698-1544823:1:exon
so has part: feature:1545997-1546084:1:exon
so has part: feature:1546180-1546283:1:exon
so has part: feature:1564364-1564531:1:exon

XP_030782014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1534366-1535500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1540191-1540357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1544698-1544823:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1545997-1546084:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1546180-1546283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1564364-1564531:1:exon

LOC115895626
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895626
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1543350..1543461)
location: region:1543350-1543461:-1
so has part: feature:1543350-1543461:-1:exon
subclass of: SO_0000623

115895626
type: Gene
SIO_000068: ncbigene

position:1543350:-1
position: 1543350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1543461:-1
position: 1543461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1543350-1543461:-1:exon

LOC115895626
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895626
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055805.1
SIO_010081: LOC115895626
subclass of: SO_0000673
so part of: LOC115895626
location: complement(1543350..1543461)
location: region:1543350-1543461:-1
so has part: feature:1543350-1543461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1543350-1543461:-1:exon

LOC115895575
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895575
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1626350..1626452
location: region:1626350-1626452:1
so has part: feature:1626350-1626452:1:exon
subclass of: SO_0000578

115895575
type: Gene
SIO_000068: ncbigene

position:1626350:1
position: 1626350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626452:1
position: 1626452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626350-1626452:1:exon

LOC115895575
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snoRNA
gene: LOC115895575
product: small nucleolar RNA U13
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055767.1
SIO_010081: LOC115895575
subclass of: SO_0000673
so part of: LOC115895575
location: 1626350..1626452
location: region:1626350-1626452:1
so has part: feature:1626350-1626452:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626350-1626452:1:exon

LOC115895503
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1801532..1817206
location: region:1801532-1817206:1
so has part: feature:1801532-1817206:1:exon
subclass of: SO_0000011

115895503
type: Gene
SIO_000068: ncbigene

position:1801532:1
position: 1801532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1817206:1
position: 1817206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1801532-1817206:1:exon

LOC115895503
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC115895503
product: uncharacterized LOC115895503
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004055704.1
SIO_010081: LOC115895503
subclass of: SO_0000673
so part of: LOC115895503
location: join(1801532..1801859,1813346..1813544,1817008..1817206)
location: region:1801532-1817206:1
so has part: feature:1801532-1801859:1:exon
so has part: feature:1813346-1813544:1:exon
so has part: feature:1817008-1817206:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1801532-1801859:1:exon

position:1801859:1
position: 1801859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1813346-1813544:1:exon

position:1813346:1
position: 1813346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1813544:1
position: 1813544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1817008-1817206:1:exon

position:1817008:1
position: 1817008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104678050
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1884077..1918507)
location: region:1884077-1918507:-1
so has part: feature:1884077-1918507:-1:exon

104678050
type: Gene
SIO_000068: ncbigene

position:1884077:-1
position: 1884077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1918507:-1
position: 1918507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1884077-1918507:-1:exon

LOC104678050
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104678050
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104678050
subclass of: SO_0000673
so part of: LOC104678050
location: complement(1884077..1884608)
location: region:1884077-1884608:-1
so has part: feature:1884077-1884608:-1:exon

position:1884608:-1
position: 1884608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1884077-1884608:-1:exon

LOC115895581
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895581
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1885107..1885209)
location: region:1885107-1885209:-1
so has part: feature:1885107-1885209:-1:exon
subclass of: SO_0000578

115895581
type: Gene
SIO_000068: ncbigene

position:1885107:-1
position: 1885107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1885209:-1
position: 1885209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1885107-1885209:-1:exon

LOC115895581
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snoRNA
gene: LOC115895581
product: small nucleolar RNA U13
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055771.1
SIO_010081: LOC115895581
subclass of: SO_0000673
so part of: LOC115895581
location: complement(1885107..1885209)
location: region:1885107-1885209:-1
so has part: feature:1885107-1885209:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1885107-1885209:-1:exon

LOC104678050
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104678050
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104678050
subclass of: SO_0000673
so part of: LOC104678050
location: complement(1897816..1897974)
location: region:1897816-1897974:-1
so has part: feature:1897816-1897974:-1:exon

position:1897816:-1
position: 1897816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897974:-1
position: 1897974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897816-1897974:-1:exon

LOC104678050
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104678050
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104678050
subclass of: SO_0000673
so part of: LOC104678050
location: complement(1904995..1905103)
location: region:1904995-1905103:-1
so has part: feature:1904995-1905103:-1:exon

position:1904995:-1
position: 1904995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905103:-1
position: 1905103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1904995-1905103:-1:exon

RBBP8
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: RBBP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1918030..2011678
location: region:1918030-2011678:1
so has part: feature:1918030-2011678:1:exon
subclass of: SO_0000010

104678047
type: Gene
SIO_000068: ncbigene

position:1918030:1
position: 1918030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011678:1
position: 2011678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1918030-2011678:1:exon

RBBP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RBBP8
product: RB binding protein 8, endonuclease
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 167 ESTs, 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_010383239.2
SIO_010081: RBBP8
subclass of: SO_0000673
so part of: RBBP8
location: join(1918030..1918275,1921241..1921440,1930928..1930970,1937942..1938037,1953151..1953263,1959531..1959597,1966824..1966999,1969479..1969583,1974096..1974193,1975792..1975904,1977625..1978519,1978601..1978727,1981793..1981881,1983403..1983517,1988035..1988178,1994127..1994196,2002339..2002435,2008080..2008221,2011330..2011678)
location: region:1918030-2011678:1
so has part: feature:1918030-1918275:1:exon
so has part: feature:1921241-1921440:1:exon
so has part: feature:1930928-1930970:1:exon
so has part: feature:1937942-1938037:1:exon
so has part: feature:1953151-1953263:1:exon
so has part: feature:1959531-1959597:1:exon
so has part: feature:1966824-1966999:1:exon
so has part: feature:1969479-1969583:1:exon
so has part: feature:1974096-1974193:1:exon
so has part: feature:1975792-1975904:1:exon
so has part: feature:1977625-1978519:1:exon
so has part: feature:1978601-1978727:1:exon
so has part: feature:1981793-1981881:1:exon
so has part: feature:1983403-1983517:1:exon
so has part: feature:1988035-1988178:1:exon
so has part: feature:1994127-1994196:1:exon
so has part: feature:2002339-2002435:1:exon
so has part: feature:2008080-2008221:1:exon
so has part: feature:2011330-2011678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1918030-1918275:1:exon

position:1918275:1
position: 1918275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1921241-1921440:1:exon

position:1921241:1
position: 1921241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1921440:1
position: 1921440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1930928-1930970:1:exon

position:1930928:1
position: 1930928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1930970:1
position: 1930970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1937942-1938037:1:exon

position:1937942:1
position: 1937942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1938037:1
position: 1938037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1953151-1953263:1:exon

position:1953151:1
position: 1953151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1953263:1
position: 1953263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1959531-1959597:1:exon

position:1959531:1
position: 1959531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1959597:1
position: 1959597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1966824-1966999:1:exon

position:1966824:1
position: 1966824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1966999:1
position: 1966999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1969479-1969583:1:exon

position:1969479:1
position: 1969479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1969583:1
position: 1969583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1974096-1974193:1:exon

position:1974096:1
position: 1974096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1974193:1
position: 1974193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1975792-1975904:1:exon

position:1975792:1
position: 1975792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1975904:1
position: 1975904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1977625-1978519:1:exon

position:1977625:1
position: 1977625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1978519:1
position: 1978519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1978601-1978727:1:exon

position:1978601:1
position: 1978601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1978727:1
position: 1978727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1981793-1981881:1:exon

position:1981793:1
position: 1981793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1981881:1
position: 1981881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1983403-1983517:1:exon

position:1983403:1
position: 1983403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1983517:1
position: 1983517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1988035-1988178:1:exon

position:1988035:1
position: 1988035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988178:1
position: 1988178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1994127-1994196:1:exon

position:1994127:1
position: 1994127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994196:1
position: 1994196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2002339-2002435:1:exon

position:2002339:1
position: 2002339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2002435:1
position: 2002435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2008080-2008221:1:exon

position:2008080:1
position: 2008080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008221:1
position: 2008221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2011330-2011678:1:exon

position:2011330:1
position: 2011330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104678050
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104678050
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104678050
subclass of: SO_0000673
so part of: LOC104678050
location: complement(1918299..1918507)
location: region:1918299-1918507:-1
so has part: feature:1918299-1918507:-1:exon

position:1918299:-1
position: 1918299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1918299-1918507:-1:exon

RBBP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RBBP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA endonuclease RBBP8
translation: MNISGSSCGSPNSADISSDFKDLWTKLKECHDKEVQGLQVKVTKLKQERILDAQRLEEFFTKNQQLREQQKVLHETIKVLEDRLRAGLCDRCAVTEEHMRKKQQEFENIRQQNLKLITELMNERNTLQEENKKLSEQLQQKIENDQQHQAAELECEEDVIPDSPITAFSFSGVNRLRRKENPHVRYIEQTHTKWEHSVCANELRKVSKSSAHPQHNPNDNEILVADTYDQSQPPMAKTHGTSSCTPDKSSFNLATVVAETLGLGVQEESETQGPMSPLGDELYHCLEGDHKNQPFEESTRNTEDSLRFSDSASKTPPQEELPTRVSSPVFGATSTIKSGLDLNTSLSPSLLQPGEKKHLKTLPFSNTCISRLEKTRSKSEDSALFTHQSLGSEVNKIIIQSSSNKQILINKNISESIGKKDRTEYVKDSNSDKHLEPLKTLGGRTSKRKKTEEESEHEVSCPQASFDKENAFPFPMDNQFSMNGDSVMDKPLDLSDRFSAIQRQEKSQGSETSKNKFRQVTLYEALKTIPKGFSSSRKASDGNCTLPKDSPEEPCLQECIILQPLSTFSPDNKPALQIKEEDAVFKIPLRPHESLETKNVLDDMKGAGSHEPIKIRTRSVHGGCELASVLQLNPCRSGKIKSLQNNQDVSFENIQWSIDPGADLSQYKMDVTVIDTKDGSQSKLGGETVDMDCTLVSETVLLKMKKQEPKGEKSSNEERKMNDSLEDMFDQTTHEEYESCLADSFSQAADEEEELSAATKKPHTHGDKQDKVKQKAFVEPYFKDNERETSLQNFPHIEVVRKKEERRKLLGHTCKECEIYYADMPAEEREKKLASCSRHRFRYIPPNTPENFWEVGFPSTQTCMERGYIKEDLDPCPRPKRRQPYNAIFSPKGKEQKT
SIO_010081: RBBP8
subclass of: SO_0000673
so part of: RBBP8
location: join(1921332..1921440,1930928..1930970,1937942..1938037,1953151..1953263,1959531..1959597,1966824..1966999,1969479..1969583,1974096..1974193,1975792..1975904,1977625..1978519,1978601..1978727,1981793..1981881,1983403..1983517,1988035..1988178,1994127..1994196,2002339..2002435,2008080..2008221,2011330..2011427)
location: region:1921332-2011427:1
so has part: feature:1921332-1921440:1:exon
so has part: feature:1930928-1930970:1:exon
so has part: feature:1937942-1938037:1:exon
so has part: feature:1953151-1953263:1:exon
so has part: feature:1959531-1959597:1:exon
so has part: feature:1966824-1966999:1:exon
so has part: feature:1969479-1969583:1:exon
so has part: feature:1974096-1974193:1:exon
so has part: feature:1975792-1975904:1:exon
so has part: feature:1977625-1978519:1:exon
so has part: feature:1978601-1978727:1:exon
so has part: feature:1981793-1981881:1:exon
so has part: feature:1983403-1983517:1:exon
so has part: feature:1988035-1988178:1:exon
so has part: feature:1994127-1994196:1:exon
so has part: feature:2002339-2002435:1:exon
so has part: feature:2008080-2008221:1:exon
so has part: feature:2011330-2011427:1:exon

XP_010381541.2
type: Protein
SIO_000068: ncbiprotein

position:1921332:1
position: 1921332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2011427:1
position: 2011427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1921332-1921440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1930928-1930970:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1937942-1938037:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1953151-1953263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1959531-1959597:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1966824-1966999:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1969479-1969583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1974096-1974193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1975792-1975904:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1977625-1978519:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1978601-1978727:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1981793-1981881:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1983403-1983517:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1988035-1988178:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1994127-1994196:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2002339-2002435:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2008080-2008221:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2011330-2011427:1:exon

CABLES1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: CABLES1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2129682..2256305
location: region:2129682-2256305:1
so has part: feature:2129682-2256305:1:exon
subclass of: SO_0000010

104678049
type: Gene
SIO_000068: ncbigene

position:2129682:1
position: 2129682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2256305:1
position: 2256305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2129682-2256305:1:exon

CABLES1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CABLES1
product: Cdk5 and Abl enzyme substrate 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 169 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030926069.1
SIO_010081: CABLES1
subclass of: SO_0000673
so part of: CABLES1
location: join(2129682..2130548,2186089..2186160,2191706..2191798,2211647..2211724,2233444..2233540,2234717..2234873,2235959..2236062,2250688..2250794,2251465..2251672,2254888..2256305)
location: region:2129682-2256305:1
so has part: feature:2129682-2130548:1:exon
so has part: feature:2186089-2186160:1:exon
so has part: feature:2191706-2191798:1:exon
so has part: feature:2211647-2211724:1:exon
so has part: feature:2233444-2233540:1:exon
so has part: feature:2234717-2234873:1:exon
so has part: feature:2235959-2236062:1:exon
so has part: feature:2250688-2250794:1:exon
so has part: feature:2251465-2251672:1:exon
so has part: feature:2254888-2256305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2129682-2130548:1:exon

position:2130548:1
position: 2130548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2186089-2186160:1:exon

position:2186089:1
position: 2186089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186160:1
position: 2186160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2191706-2191798:1:exon

position:2191706:1
position: 2191706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2191798:1
position: 2191798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2211647-2211724:1:exon

position:2211647:1
position: 2211647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2211724:1
position: 2211724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2233444-2233540:1:exon

position:2233444:1
position: 2233444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2233540:1
position: 2233540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2234717-2234873:1:exon

position:2234717:1
position: 2234717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2234873:1
position: 2234873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2235959-2236062:1:exon

position:2235959:1
position: 2235959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2236062:1
position: 2236062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2250688-2250794:1:exon

position:2250688:1
position: 2250688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2250794:1
position: 2250794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2251465-2251672:1:exon

position:2251465:1
position: 2251465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2251672:1
position: 2251672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2254888-2256305:1:exon

position:2254888:1
position: 2254888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CABLES1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CABLES1
product: Cdk5 and Abl enzyme substrate 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 149 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926070.1
SIO_010081: CABLES1
subclass of: SO_0000673
so part of: CABLES1
location: join(2129682..2130548,2186089..2186160,2191706..2191798,2233444..2233540,2234717..2234873,2235959..2236062,2250688..2250794,2251465..2251672,2254888..2256305)
location: region:2129682-2256305:1
so has part: feature:2129682-2130548:1:exon
so has part: feature:2186089-2186160:1:exon
so has part: feature:2191706-2191798:1:exon
so has part: feature:2233444-2233540:1:exon
so has part: feature:2234717-2234873:1:exon
so has part: feature:2235959-2236062:1:exon
so has part: feature:2250688-2250794:1:exon
so has part: feature:2251465-2251672:1:exon
so has part: feature:2254888-2256305:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2129682-2130548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2186089-2186160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2191706-2191798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2233444-2233540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2234717-2234873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2235959-2236062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2250688-2250794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2251465-2251672:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2254888-2256305:1:exon

CABLES1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CABLES1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 and ABL1 enzyme substrate 1 isoform X1
translation: MAAAAATTAACSSGSAGTDAAGASGLQQPPPQPQPTAAAPAQPPPEPPRKPRVDPRRRQAALSFLTNISLDGRPPPQDAEWGGGEEGGAAKPGAGGACGGRTRFSLLAAAERGGCIALAAPGTPAAGLAAGSGPCLPQPSSLPPLIAGGHATVSGPGVARGFASPLGAGRTSGELWQPPGPAPLAACAQVQLLDGSGGAGQEELEEDDAFTGVQMPAAVFLGSGTPGSGSGSRGRLNSFTQGILPIVFSRPTSQNYCSLEQPGQGGSTSAFEQLQRSRRRLISQRSSLETLEDIEENAPLRRCRTLSGSPRPKNFKKIHFIKNMRQHDTRNGRIVLISGRRSFCSIFSVLPYRDSTQVGDLKLDGGRQSAGAVSLKEIIGLEGVELGADGKTVSYTQFLLPTNAFGARRNTIDSTSSFSQFRNLSHRSLSIGRASGTQGSLDTGSDLGDFMDYDPNLLDDPQWPCGKHKRVLIFPSYMTTVIDYVKPSDLKKDMNETFKEKFPHIKLTLSKIRSLKREMRKLAQEDCGLEEPTVAMAFVYFEKLALKGKLNKQNRKLCAGACVLLAAKIGSDLKKHEVKHLIDKLEEKFRLNRRELIAFEFPVLVALEFALHLPEHEVMPHYRRLVQSS
SIO_010081: CABLES1
subclass of: SO_0000673
so part of: CABLES1
location: join(2129716..2130548,2186089..2186160,2191706..2191798,2211647..2211724,2233444..2233540,2234717..2234873,2235959..2236062,2250688..2250794,2251465..2251672,2254888..2255028)
location: region:2129716-2255028:1
so has part: feature:2129716-2130548:1:exon
so has part: feature:2186089-2186160:1:exon
so has part: feature:2191706-2191798:1:exon
so has part: feature:2211647-2211724:1:exon
so has part: feature:2233444-2233540:1:exon
so has part: feature:2234717-2234873:1:exon
so has part: feature:2235959-2236062:1:exon
so has part: feature:2250688-2250794:1:exon
so has part: feature:2251465-2251672:1:exon
so has part: feature:2254888-2255028:1:exon

XP_030781929.1
type: Protein
SIO_000068: ncbiprotein

position:2129716:1
position: 2129716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2255028:1
position: 2255028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2129716-2130548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2186089-2186160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2191706-2191798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2211647-2211724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2233444-2233540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2234717-2234873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2235959-2236062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2250688-2250794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2251465-2251672:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2254888-2255028:1:exon

CABLES1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CABLES1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CDK5 and ABL1 enzyme substrate 1 isoform X2
translation: MAAAAATTAACSSGSAGTDAAGASGLQQPPPQPQPTAAAPAQPPPEPPRKPRVDPRRRQAALSFLTNISLDGRPPPQDAEWGGGEEGGAAKPGAGGACGGRTRFSLLAAAERGGCIALAAPGTPAAGLAAGSGPCLPQPSSLPPLIAGGHATVSGPGVARGFASPLGAGRTSGELWQPPGPAPLAACAQVQLLDGSGGAGQEELEEDDAFTGVQMPAAVFLGSGTPGSGSGSRGRLNSFTQGILPIVFSRPTSQNYCSLEQPGQGGSTSAFEQLQRSRRRLISQRSSLETLEDIEENAPLRRCRTLSGSPRPKNFKKIHFIKNMRQHDTRNGRDLKLDGGRQSAGAVSLKEIIGLEGVELGADGKTVSYTQFLLPTNAFGARRNTIDSTSSFSQFRNLSHRSLSIGRASGTQGSLDTGSDLGDFMDYDPNLLDDPQWPCGKHKRVLIFPSYMTTVIDYVKPSDLKKDMNETFKEKFPHIKLTLSKIRSLKREMRKLAQEDCGLEEPTVAMAFVYFEKLALKGKLNKQNRKLCAGACVLLAAKIGSDLKKHEVKHLIDKLEEKFRLNRRELIAFEFPVLVALEFALHLPEHEVMPHYRRLVQSS
SIO_010081: CABLES1
subclass of: SO_0000673
so part of: CABLES1
location: join(2129716..2130548,2186089..2186160,2191706..2191798,2233444..2233540,2234717..2234873,2235959..2236062,2250688..2250794,2251465..2251672,2254888..2255028)
location: region:2129716-2255028:1
so has part: feature:2129716-2130548:1:exon
so has part: feature:2186089-2186160:1:exon
so has part: feature:2191706-2191798:1:exon
so has part: feature:2233444-2233540:1:exon
so has part: feature:2234717-2234873:1:exon
so has part: feature:2235959-2236062:1:exon
so has part: feature:2250688-2250794:1:exon
so has part: feature:2251465-2251672:1:exon
so has part: feature:2254888-2255028:1:exon

XP_030781930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2129716-2130548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2186089-2186160:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2191706-2191798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2233444-2233540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2234717-2234873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2235959-2236062:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2250688-2250794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2251465-2251672:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2254888-2255028:1:exon

TMEM241
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: TMEM241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2291508..2434838)
location: region:2291508-2434838:-1
so has part: feature:2291508-2434838:-1:exon
subclass of: SO_0000010

104678046
type: Gene
SIO_000068: ncbigene

position:2291508:-1
position: 2291508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2434838:-1
position: 2434838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2291508-2434838:-1:exon

TMEM241
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TMEM241
product: transmembrane protein 241
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 11 ESTs, 3 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_010383238.2
SIO_010081: TMEM241
subclass of: SO_0000673
so part of: TMEM241
location: complement(join(2291508..2293543,2305116..2305180,2351001..2351094,2355088..2355157,2363836..2363870,2367398..2367433,2368904..2368949,2370134..2370182,2372133..2372184,2376029..2376054,2383328..2383405,2399178..2399259,2420095..2420172,2427539..2427585,2434656..2434838))
location: region:2291508-2434838:-1
so has part: feature:2434656-2434838:-1:exon
so has part: feature:2427539-2427585:-1:exon
so has part: feature:2420095-2420172:-1:exon
so has part: feature:2399178-2399259:-1:exon
so has part: feature:2383328-2383405:-1:exon
so has part: feature:2376029-2376054:-1:exon
so has part: feature:2372133-2372184:-1:exon
so has part: feature:2370134-2370182:-1:exon
so has part: feature:2368904-2368949:-1:exon
so has part: feature:2367398-2367433:-1:exon
so has part: feature:2363836-2363870:-1:exon
so has part: feature:2355088-2355157:-1:exon
so has part: feature:2351001-2351094:-1:exon
so has part: feature:2305116-2305180:-1:exon
so has part: feature:2291508-2293543:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2434656-2434838:-1:exon

position:2434656:-1
position: 2434656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2427539-2427585:-1:exon

position:2427539:-1
position: 2427539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2427585:-1
position: 2427585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2420095-2420172:-1:exon

position:2420095:-1
position: 2420095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2420172:-1
position: 2420172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2399178-2399259:-1:exon

position:2399178:-1
position: 2399178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399259:-1
position: 2399259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2383328-2383405:-1:exon

position:2383328:-1
position: 2383328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383405:-1
position: 2383405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2376029-2376054:-1:exon

position:2376029:-1
position: 2376029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2376054:-1
position: 2376054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2372133-2372184:-1:exon

position:2372133:-1
position: 2372133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2372184:-1
position: 2372184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2370134-2370182:-1:exon

position:2370134:-1
position: 2370134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2370182:-1
position: 2370182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2368904-2368949:-1:exon

position:2368904:-1
position: 2368904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2368949:-1
position: 2368949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2367398-2367433:-1:exon

position:2367398:-1
position: 2367398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2367433:-1
position: 2367433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2363836-2363870:-1:exon

position:2363836:-1
position: 2363836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2363870:-1
position: 2363870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2355088-2355157:-1:exon

position:2355088:-1
position: 2355088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2355157:-1
position: 2355157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2351001-2351094:-1:exon

position:2351001:-1
position: 2351001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2351094:-1
position: 2351094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2305116-2305180:-1:exon

position:2305116:-1
position: 2305116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2305180:-1
position: 2305180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2291508-2293543:-1:exon

position:2293543:-1
position: 2293543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TMEM241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 241
translation: MCVRRSLVGLTFCTCYLASYLTNKYVLSVLKFTYPTLFQGWQTLIGGLLLHVSWKLGWVEINSSSRSHVLAWLPASALFVGMIYAGSRALSRLAIPVFLTLCNVAEVIVCGYQKCFQKEKTSPAKICSALFLLAAAGCLPFNDSQFDPDGYFWAVIHLFCVGAYKILRKSQKPSALSDIDQQYLNYIFSVVLLAFASHPTGDLFSVLDFPFLYFYRFHGSCCASGFLGFFLMFSTVKLKSHLAPAQCAAWIFFAKIITAGLSVLLFEAILTSATTGCVLLGALGEALLVFSERKGS
SIO_010081: TMEM241
subclass of: SO_0000673
so part of: TMEM241
location: complement(join(2293483..2293543,2305116..2305180,2351001..2351094,2355088..2355157,2363836..2363870,2367398..2367433,2368904..2368949,2370134..2370182,2372133..2372184,2376029..2376054,2383328..2383405,2399178..2399259,2420095..2420172,2427539..2427585,2434656..2434727))
location: region:2293483-2434727:-1
so has part: feature:2434656-2434727:-1:exon
so has part: feature:2427539-2427585:-1:exon
so has part: feature:2420095-2420172:-1:exon
so has part: feature:2399178-2399259:-1:exon
so has part: feature:2383328-2383405:-1:exon
so has part: feature:2376029-2376054:-1:exon
so has part: feature:2372133-2372184:-1:exon
so has part: feature:2370134-2370182:-1:exon
so has part: feature:2368904-2368949:-1:exon
so has part: feature:2367398-2367433:-1:exon
so has part: feature:2363836-2363870:-1:exon
so has part: feature:2355088-2355157:-1:exon
so has part: feature:2351001-2351094:-1:exon
so has part: feature:2305116-2305180:-1:exon
so has part: feature:2293483-2293543:-1:exon

XP_010381540.2
type: Protein
SIO_000068: ncbiprotein

position:2293483:-1
position: 2293483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2434727:-1
position: 2434727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2434656-2434727:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2427539-2427585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2420095-2420172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2399178-2399259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2383328-2383405:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2376029-2376054:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372133-2372184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2370134-2370182:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2368904-2368949:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2367398-2367433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2363836-2363870:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2355088-2355157:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2351001-2351094:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2305116-2305180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2293483-2293543:-1:exon

RIOK3
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: RIOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2452853..2483686
location: region:2452853-2483686:1
so has part: feature:2452853-2483686:1:exon
subclass of: SO_0000010

104678044
type: Gene
SIO_000068: ncbigene

position:2452853:1
position: 2452853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2483686:1
position: 2483686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452853-2483686:1:exon

RIOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RIOK3
product: RIO kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 386 ESTs, 9 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010383236.2
SIO_010081: RIOK3
subclass of: SO_0000673
so part of: RIOK3
location: join(2452853..2453524,2463395..2463510,2464398..2464543,2464637..2464744,2464948..2465057,2466553..2466696,2467835..2467962,2474037..2474234,2475546..2475705,2478262..2478342,2478435..2478524,2480041..2480148,2481885..2483686)
location: region:2452853-2483686:1
so has part: feature:2452853-2453524:1:exon
so has part: feature:2463395-2463510:1:exon
so has part: feature:2464398-2464543:1:exon
so has part: feature:2464637-2464744:1:exon
so has part: feature:2464948-2465057:1:exon
so has part: feature:2466553-2466696:1:exon
so has part: feature:2467835-2467962:1:exon
so has part: feature:2474037-2474234:1:exon
so has part: feature:2475546-2475705:1:exon
so has part: feature:2478262-2478342:1:exon
so has part: feature:2478435-2478524:1:exon
so has part: feature:2480041-2480148:1:exon
so has part: feature:2481885-2483686:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2452853-2453524:1:exon

position:2453524:1
position: 2453524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2463395-2463510:1:exon

position:2463395:1
position: 2463395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2463510:1
position: 2463510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2464398-2464543:1:exon

position:2464398:1
position: 2464398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2464543:1
position: 2464543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2464637-2464744:1:exon

position:2464637:1
position: 2464637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2464744:1
position: 2464744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2464948-2465057:1:exon

position:2464948:1
position: 2464948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2465057:1
position: 2465057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2466553-2466696:1:exon

position:2466553:1
position: 2466553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2466696:1
position: 2466696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2467835-2467962:1:exon

position:2467835:1
position: 2467835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2467962:1
position: 2467962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2474037-2474234:1:exon

position:2474037:1
position: 2474037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2474234:1
position: 2474234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2475546-2475705:1:exon

position:2475546:1
position: 2475546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2475705:1
position: 2475705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2478262-2478342:1:exon

position:2478262:1
position: 2478262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478342:1
position: 2478342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2478435-2478524:1:exon

position:2478435:1
position: 2478435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2478524:1
position: 2478524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2480041-2480148:1:exon

position:2480041:1
position: 2480041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2480148:1
position: 2480148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2481885-2483686:1:exon

position:2481885:1
position: 2481885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RIOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RIOK3
product: RIO kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 209 ESTs, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_030926020.1
SIO_010081: RIOK3
subclass of: SO_0000673
so part of: RIOK3
location: join(2452859..2453524,2461352..2461446,2463395..2463510,2464398..2464543,2464637..2464744,2464948..2465057,2466553..2466696,2467835..2467962,2474037..2474234,2475546..2475705,2478262..2478342,2478435..2478524,2480041..2480148,2481885..2483686)
location: region:2452859-2483686:1
so has part: feature:2452859-2453524:1:exon
so has part: feature:2461352-2461446:1:exon
so has part: feature:2463395-2463510:1:exon
so has part: feature:2464398-2464543:1:exon
so has part: feature:2464637-2464744:1:exon
so has part: feature:2464948-2465057:1:exon
so has part: feature:2466553-2466696:1:exon
so has part: feature:2467835-2467962:1:exon
so has part: feature:2474037-2474234:1:exon
so has part: feature:2475546-2475705:1:exon
so has part: feature:2478262-2478342:1:exon
so has part: feature:2478435-2478524:1:exon
so has part: feature:2480041-2480148:1:exon
so has part: feature:2481885-2483686:1:exon

position:2452859:1
position: 2452859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2452859-2453524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2461352-2461446:1:exon

position:2461352:1
position: 2461352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461446:1
position: 2461446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2463395-2463510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464398-2464543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464637-2464744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2464948-2465057:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2466553-2466696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2467835-2467962:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2474037-2474234:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2475546-2475705:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2478262-2478342:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2478435-2478524:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2480041-2480148:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2481885-2483686:1:exon

RIOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RIOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase RIO3 isoform X1
translation: MDLVGVASPEPGPAAAWGPSKCPWAIPQNTISCSLADVMSEQLAKELQLEEEAAVFPEVAVAEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVHPYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFIGKGKGITTKHDEVVCGRKNTARMENFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECRLVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALSERELFSAVSGLNISADNEADFLAEIEALEKMNEDHVQKNGRKAASFLKDDGDPPAPYDE
SIO_010081: RIOK3
subclass of: SO_0000673
so part of: RIOK3
location: join(2453462..2453524,2463395..2463510,2464398..2464543,2464637..2464744,2464948..2465057,2466553..2466696,2467835..2467962,2474037..2474234,2475546..2475705,2478262..2478342,2478435..2478524,2480041..2480148,2481885..2481992)
location: region:2453462-2481992:1
so has part: feature:2453462-2453524:1:exon
so has part: feature:2463395-2463510:1:exon
so has part: feature:2464398-2464543:1:exon
so has part: feature:2464637-2464744:1:exon
so has part: feature:2464948-2465057:1:exon
so has part: feature:2466553-2466696:1:exon
so has part: feature:2467835-2467962:1:exon
so has part: feature:2474037-2474234:1:exon
so has part: feature:2475546-2475705:1:exon
so has part: feature:2478262-2478342:1:exon
so has part: feature:2478435-2478524:1:exon
so has part: feature:2480041-2480148:1:exon
so has part: feature:2481885-2481992:1:exon

XP_010381538.1
type: Protein
SIO_000068: ncbiprotein

position:2453462:1
position: 2453462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2481992:1
position: 2481992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2453462-2453524:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2463395-2463510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2464398-2464543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464637-2464744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464948-2465057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2466553-2466696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467835-2467962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2474037-2474234:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2475546-2475705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2478262-2478342:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2478435-2478524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2480041-2480148:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2481885-2481992:1:exon

RIOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RIOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase RIO3 isoform X2
translation: MCPWAIPQNTISCSLADVMSEQLAKELQLEEEAAVFPEVAVAEGPFITGENIDTSSDLMLAQMLQMEYDREYDAQLRREEKKFNGDSKVSISFENYRKVHPYEDSDSSEDEVDWQDTRDDPYRPAKPVPTPKKGFIGKGKGITTKHDEVVCGRKNTARMENFAPEFQVGDGIGMDLKLSNHVFNALKQHAYSEERRSARLHEKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECRLVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQKGGVKEALSERELFSAVSGLNISADNEADFLAEIEALEKMNEDHVQKNGRKAASFLKDDGDPPAPYDE
SIO_010081: RIOK3
subclass of: SO_0000673
so part of: RIOK3
location: join(2461444..2461446,2463395..2463510,2464398..2464543,2464637..2464744,2464948..2465057,2466553..2466696,2467835..2467962,2474037..2474234,2475546..2475705,2478262..2478342,2478435..2478524,2480041..2480148,2481885..2481992)
location: region:2461444-2481992:1
so has part: feature:2461444-2461446:1:exon
so has part: feature:2463395-2463510:1:exon
so has part: feature:2464398-2464543:1:exon
so has part: feature:2464637-2464744:1:exon
so has part: feature:2464948-2465057:1:exon
so has part: feature:2466553-2466696:1:exon
so has part: feature:2467835-2467962:1:exon
so has part: feature:2474037-2474234:1:exon
so has part: feature:2475546-2475705:1:exon
so has part: feature:2478262-2478342:1:exon
so has part: feature:2478435-2478524:1:exon
so has part: feature:2480041-2480148:1:exon
so has part: feature:2481885-2481992:1:exon

XP_030781880.1
type: Protein
SIO_000068: ncbiprotein

position:2461444:1
position: 2461444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2461444-2461446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2463395-2463510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2464398-2464543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2464637-2464744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2464948-2465057:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2466553-2466696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2467835-2467962:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2474037-2474234:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2475546-2475705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2478262-2478342:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2478435-2478524:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2480041-2480148:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2481885-2481992:1:exon

LOC104678043
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2486859..2487592
location: region:2486859-2487592:1
so has part: feature:2486859-2487592:1:exon
subclass of: SO_0000010

104678043
type: Gene
SIO_000068: ncbigene

position:2486859:1
position: 2486859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487592:1
position: 2487592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2486859-2487592:1:exon

LOC104678043
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678043
product: U1 small nuclear ribonucleoprotein C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 274 ESTs, 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010383235.2
SIO_010081: LOC104678043
subclass of: SO_0000673
so part of: LOC104678043
location: 2486859..2487592
location: region:2486859-2487592:1
so has part: feature:2486859-2487592:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2486859-2487592:1:exon

LOC104678043
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U1 small nuclear ribonucleoprotein C
translation: MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDKTTAAFQQGKIPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGGPPMMPMMGPPPPGMMPVGPAPGMRPPMGGHMPMMPGPPMMRPPARPMMVPTRPGMTRPDR
SIO_010081: LOC104678043
subclass of: SO_0000673
so part of: LOC104678043
location: 2486884..2487363
location: region:2486884-2487363:1
so has part: feature:2486884-2487363:1:exon

XP_010381537.1
type: Protein
SIO_000068: ncbiprotein

position:2486884:1
position: 2486884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487363:1
position: 2487363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2486884-2487363:1:exon

RMC1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: RMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2501805..2534045
location: region:2501805-2534045:1
so has part: feature:2501805-2534045:1:exon
subclass of: SO_0000010

104678042
type: Gene
SIO_000068: ncbigene

position:2501805:1
position: 2501805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2534045:1
position: 2534045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501805-2534045:1:exon

RMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RMC1
product: regulator of MON1-CCZ1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 88 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030926026.1
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501805..2502067,2502728..2502804,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530055..2530280,2531294..2531452)
location: region:2501805-2531452:1
so has part: feature:2501805-2502067:1:exon
so has part: feature:2502728-2502804:1:exon
so has part: feature:2514942-2515082:1:exon
so has part: feature:2515401-2515504:1:exon
so has part: feature:2517886-2517975:1:exon
so has part: feature:2518065-2518170:1:exon
so has part: feature:2519204-2519315:1:exon
so has part: feature:2523692-2523736:1:exon
so has part: feature:2523993-2524046:1:exon
so has part: feature:2525752-2525880:1:exon
so has part: feature:2526921-2527027:1:exon
so has part: feature:2528858-2528977:1:exon
so has part: feature:2529292-2529369:1:exon
so has part: feature:2529696-2529800:1:exon
so has part: feature:2529897-2529965:1:exon
so has part: feature:2530055-2530280:1:exon
so has part: feature:2531294-2531452:1:exon

position:2531452:1
position: 2531452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501805-2502067:1:exon

position:2502067:1
position: 2502067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2502728-2502804:1:exon

position:2502728:1
position: 2502728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2502804:1
position: 2502804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2514942-2515082:1:exon

position:2514942:1
position: 2514942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515082:1
position: 2515082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2515401-2515504:1:exon

position:2515401:1
position: 2515401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515504:1
position: 2515504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2517886-2517975:1:exon

position:2517886:1
position: 2517886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2517975:1
position: 2517975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2518065-2518170:1:exon

position:2518065:1
position: 2518065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2518170:1
position: 2518170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2519204-2519315:1:exon

position:2519204:1
position: 2519204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2519315:1
position: 2519315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2523692-2523736:1:exon

position:2523692:1
position: 2523692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2523736:1
position: 2523736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2523993-2524046:1:exon

position:2523993:1
position: 2523993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2524046:1
position: 2524046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2525752-2525880:1:exon

position:2525752:1
position: 2525752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2525880:1
position: 2525880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2526921-2527027:1:exon

position:2526921:1
position: 2526921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2527027:1
position: 2527027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2528858-2528977:1:exon

position:2528858:1
position: 2528858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2528977:1
position: 2528977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2529292-2529369:1:exon

position:2529292:1
position: 2529292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529369:1
position: 2529369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2529696-2529800:1:exon

position:2529696:1
position: 2529696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529800:1
position: 2529800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2529897-2529965:1:exon

position:2529897:1
position: 2529897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529965:1
position: 2529965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2530055-2530280:1:exon

position:2530055:1
position: 2530055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2530280:1
position: 2530280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2531294-2531452:1:exon

position:2531294:1
position: 2531294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RMC1
product: regulator of MON1-CCZ1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 119 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030926024.1
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501811..2502067,2502728..2502804,2505289..2505373,2506322..2506378,2507532..2507618,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530055..2530280,2533882..2534045)
location: region:2501811-2534045:1
so has part: feature:2501811-2502067:1:exon
so has part: feature:2502728-2502804:1:exon
so has part: feature:2505289-2505373:1:exon
so has part: feature:2506322-2506378:1:exon
so has part: feature:2507532-2507618:1:exon
so has part: feature:2514942-2515082:1:exon
so has part: feature:2515401-2515504:1:exon
so has part: feature:2517886-2517975:1:exon
so has part: feature:2518065-2518170:1:exon
so has part: feature:2519204-2519315:1:exon
so has part: feature:2523692-2523736:1:exon
so has part: feature:2523993-2524046:1:exon
so has part: feature:2525752-2525880:1:exon
so has part: feature:2526921-2527027:1:exon
so has part: feature:2528858-2528977:1:exon
so has part: feature:2529292-2529369:1:exon
so has part: feature:2529696-2529800:1:exon
so has part: feature:2529897-2529965:1:exon
so has part: feature:2530055-2530280:1:exon
so has part: feature:2533882-2534045:1:exon

position:2501811:1
position: 2501811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501811-2502067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2502728-2502804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2505289-2505373:1:exon

position:2505289:1
position: 2505289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505373:1
position: 2505373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2506322-2506378:1:exon

position:2506322:1
position: 2506322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506378:1
position: 2506378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2507532-2507618:1:exon

position:2507532:1
position: 2507532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2507618:1
position: 2507618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2514942-2515082:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2515401-2515504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2517886-2517975:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2518065-2518170:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2519204-2519315:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2523692-2523736:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2523993-2524046:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2525752-2525880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2526921-2527027:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2528858-2528977:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2529292-2529369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2529696-2529800:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2529897-2529965:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2530055-2530280:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2533882-2534045:1:exon

position:2533882:1
position: 2533882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RMC1
product: regulator of MON1-CCZ1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 178 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010383232.1
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
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RMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RMC1
product: regulator of MON1-CCZ1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 90 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_030926025.1
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501811..2502067,2502728..2502804,2505289..2505373,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530055..2530280,2531294..2531452)
location: region:2501811-2531452:1
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RMC1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: RMC1
product: regulator of MON1-CCZ1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 106 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004055697.1
SIO_010081: RMC1
so part of: RMC1
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position:2530089:1
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reference: sequence
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urn:…
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position:2529878:1
position: 2529878
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:2530055-2530089:1:exon

RMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RMC1
product: regulator of MON1-CCZ1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 86 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010383233.2
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501830..2502067,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530055..2530280,2531294..2531452)
location: region:2501830-2531452:1
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position:2501830:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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RMC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: RMC1
product: regulator of MON1-CCZ1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 ESTs, 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926027.1
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501830..2502067,2502728..2502804,2505289..2505373,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530179..2530280,2531294..2531353)
location: region:2501830-2531353:1
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position:2531353:1
position: 2531353
reference: sequence
type: ForwardStrandPosition
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urn:…
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SIO_000300: 17
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position:2530179:1
position: 2530179
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:2531294-2531353:1:exon

RMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X2
translation: MGEEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDKGEVKCIKFSLENKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGIEFYQVLPEKRSLKLLKSHNLNVNWYMYCPESAVILLSTTVLENVLQPFHFRAGTMSKLPKFEIELPAAPKSTKPSLSERDIAMATVYGQLYVLFLRHHSRTSNSTGAEVVLYHLPREGACKKMHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGSVTFHHPVLPARSIQPYQIPIAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQRKECKMVILSVCSQMLSESDRASLPVIATVFDKLNHEYKKYLDAEQSYAMAVEAGQSRSSPLLKRPVRTQAVLDQSDVYTHVLSAFVEKKEMPHKFVIAVLMEYIRSLNQFQIAVQHYLHELVIKTLVQHNLFYMLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTEDNMLFYTIFRFFEQRNQRLRGSPNFTPAHCHLKRNCTDRYSATEHLFCS
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501966..2502067,2502728..2502804,2505289..2505373,2506322..2506378,2507532..2507618,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530055..2530280,2533882..2533949)
location: region:2501966-2533949:1
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XP_030781884.1
type: Protein
SIO_000068: ncbiprotein

position:2501966:1
position: 2501966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2533949:1
position: 2533949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000628: feature:2517886-2517975:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2518065-2518170:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2519204-2519315:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2523692-2523736:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2523993-2524046:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2525752-2525880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2526921-2527027:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2528858-2528977:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2529292-2529369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2529696-2529800:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2529897-2529965:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2530055-2530280:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2533882-2533949:1:exon

RMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X1
translation: MGEEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDKGEVKCIKFSLENKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGIEFYQVLPEKRSLKLLKSHNLNVNWYMYCPESAVILLSTTVLENVLQPFHFRAGTMSKLPKFEIELPAAPKSTKPSLSERDIAMATVYGQLYVLFLRHHSRTSNSTGAEVVLYHLPREGACKKMHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGSVTFHHPVLPARSIQPYQIPIAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQRKECKMVILSVCSQMLSESDRASLPVIATVFDKLNHEYKKYLDAEQSYAMAVEAGQSRSSPLLKRPVRTQAVLDQSDVYTHVLSAFVEKKEMPHKFVIAVLMEYIRSLNQFQIAVQHYLHELVIKTLVQHNLFYMLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTEDNMLFYTIFRFFEQRNQRLRGSPNFTPGEHCEEHVAFFKQIFGDQALMRPTTF
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501966..2502067,2502728..2502804,2505289..2505373,2506322..2506378,2507532..2507618,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530055..2530280,2531294..2531373)
location: region:2501966-2531373:1
so has part: feature:2501966-2502067:1:exon
so has part: feature:2502728-2502804:1:exon
so has part: feature:2505289-2505373:1:exon
so has part: feature:2506322-2506378:1:exon
so has part: feature:2507532-2507618:1:exon
so has part: feature:2514942-2515082:1:exon
so has part: feature:2515401-2515504:1:exon
so has part: feature:2517886-2517975:1:exon
so has part: feature:2518065-2518170:1:exon
so has part: feature:2519204-2519315:1:exon
so has part: feature:2523692-2523736:1:exon
so has part: feature:2523993-2524046:1:exon
so has part: feature:2525752-2525880:1:exon
so has part: feature:2526921-2527027:1:exon
so has part: feature:2528858-2528977:1:exon
so has part: feature:2529292-2529369:1:exon
so has part: feature:2529696-2529800:1:exon
so has part: feature:2529897-2529965:1:exon
so has part: feature:2530055-2530280:1:exon
so has part: feature:2531294-2531373:1:exon

XP_010381534.1
type: Protein
SIO_000068: ncbiprotein

position:2531373:1
position: 2531373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501966-2502067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2502728-2502804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2505289-2505373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2506322-2506378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2507532-2507618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2514942-2515082:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2515401-2515504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2517886-2517975:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2518065-2518170:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2519204-2519315:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2523692-2523736:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2523993-2524046:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2525752-2525880:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2526921-2527027:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2528858-2528977:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2529292-2529369:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2529696-2529800:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2529897-2529965:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2530055-2530280:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2531294-2531373:1:exon

RMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X3
translation: MGEEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDKGEVKCIKFSLENKILAVQRTSKTVVLPEKRSLKLLKSHNLNVNWYMYCPESAVILLSTTVLENVLQPFHFRAGTMSKLPKFEIELPAAPKSTKPSLSERDIAMATVYGQLYVLFLRHHSRTSNSTGAEVVLYHLPREGACKKMHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGSVTFHHPVLPARSIQPYQIPIAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQRKECKMVILSVCSQMLSESDRASLPVIATVFDKLNHEYKKYLDAEQSYAMAVEAGQSRSSPLLKRPVRTQAVLDQSDVYTHVLSAFVEKKEMPHKFVIAVLMEYIRSLNQFQIAVQHYLHELVIKTLVQHNLFYMLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTEDNMLFYTIFRFFEQRNQRLRGSPNFTPGEHCEEHVAFFKQIFGDQALMRPTTF
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501966..2502067,2502728..2502804,2505289..2505373,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530055..2530280,2531294..2531373)
location: region:2501966-2531373:1
so has part: feature:2501966-2502067:1:exon
so has part: feature:2502728-2502804:1:exon
so has part: feature:2505289-2505373:1:exon
so has part: feature:2514942-2515082:1:exon
so has part: feature:2515401-2515504:1:exon
so has part: feature:2517886-2517975:1:exon
so has part: feature:2518065-2518170:1:exon
so has part: feature:2519204-2519315:1:exon
so has part: feature:2523692-2523736:1:exon
so has part: feature:2523993-2524046:1:exon
so has part: feature:2525752-2525880:1:exon
so has part: feature:2526921-2527027:1:exon
so has part: feature:2528858-2528977:1:exon
so has part: feature:2529292-2529369:1:exon
so has part: feature:2529696-2529800:1:exon
so has part: feature:2529897-2529965:1:exon
so has part: feature:2530055-2530280:1:exon
so has part: feature:2531294-2531373:1:exon

XP_030781885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2501966-2502067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2502728-2502804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2505289-2505373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2514942-2515082:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2515401-2515504:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2517886-2517975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2518065-2518170:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2519204-2519315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2523692-2523736:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2523993-2524046:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2525752-2525880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2526921-2527027:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2528858-2528977:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2529292-2529369:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2529696-2529800:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2529897-2529965:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2530055-2530280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2531294-2531373:1:exon

RMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X4
translation: MGEEDYYLELCERPVQFEKANPVNCVFFDEANKQVLPEKRSLKLLKSHNLNVNWYMYCPESAVILLSTTVLENVLQPFHFRAGTMSKLPKFEIELPAAPKSTKPSLSERDIAMATVYGQLYVLFLRHHSRTSNSTGAEVVLYHLPREGACKKMHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGSVTFHHPVLPARSIQPYQIPIAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQRKECKMVILSVCSQMLSESDRASLPVIATVFDKLNHEYKKYLDAEQSYAMAVEAGQSRSSPLLKRPVRTQAVLDQSDVYTHVLSAFVEKKEMPHKFVIAVLMEYIRSLNQFQIAVQHYLHELVIKTLVQHNLFYMLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTEDNMLFYTIFRFFEQRNQRLRGSPNFTPGEHCEEHVAFFKQIFGDQALMRPTTF
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501966..2502067,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530055..2530280,2531294..2531373)
location: region:2501966-2531373:1
so has part: feature:2501966-2502067:1:exon
so has part: feature:2514942-2515082:1:exon
so has part: feature:2515401-2515504:1:exon
so has part: feature:2517886-2517975:1:exon
so has part: feature:2518065-2518170:1:exon
so has part: feature:2519204-2519315:1:exon
so has part: feature:2523692-2523736:1:exon
so has part: feature:2523993-2524046:1:exon
so has part: feature:2525752-2525880:1:exon
so has part: feature:2526921-2527027:1:exon
so has part: feature:2528858-2528977:1:exon
so has part: feature:2529292-2529369:1:exon
so has part: feature:2529696-2529800:1:exon
so has part: feature:2529897-2529965:1:exon
so has part: feature:2530055-2530280:1:exon
so has part: feature:2531294-2531373:1:exon

XP_010381535.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2501966-2502067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2514942-2515082:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2515401-2515504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2517886-2517975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2518065-2518170:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2519204-2519315:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2523692-2523736:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2523993-2524046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2525752-2525880:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2526921-2527027:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2528858-2528977:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2529292-2529369:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2529696-2529800:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2529897-2529965:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2530055-2530280:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2531294-2531373:1:exon

RMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X6
translation: MGEEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDKGEVKCIKFSLENKILAVQRTSKTVVLPEKRSLKLLKSHNLNVNWYMYCPESAVILLSTTVLENVLQPFHFRAGTMSKLPKFEIELPAAPKSTKPSLSERDIAMATVYGQLYVLFLRHHSRTSNSTGAEVVLYHLPREGACKKMHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGSVTFHHPVLPARSIQPYQIPIAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQRKECKMVILSVCSQMLSESDRASLPVIATVFDKLNHEYKKYLDAEQSYAMAVEAGQSRSSPLLKRPVRTQAVLDQSDVYTHVLSAFVEKKEMPHKFVIAVLMEYIRSLNQFQIAVQHYLHELVIKTLVQHNLFYMLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKMLQSRLKTTCFSIQYSGFLNSEISVCEGAPISHQGNTVKNMLLFSNRFLETKL
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2501966..2502067,2502728..2502804,2505289..2505373,2514942..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530179..2530280,2531294..2531353)
location: region:2501966-2531353:1
so has part: feature:2501966-2502067:1:exon
so has part: feature:2502728-2502804:1:exon
so has part: feature:2505289-2505373:1:exon
so has part: feature:2514942-2515082:1:exon
so has part: feature:2515401-2515504:1:exon
so has part: feature:2517886-2517975:1:exon
so has part: feature:2518065-2518170:1:exon
so has part: feature:2519204-2519315:1:exon
so has part: feature:2523692-2523736:1:exon
so has part: feature:2523993-2524046:1:exon
so has part: feature:2525752-2525880:1:exon
so has part: feature:2526921-2527027:1:exon
so has part: feature:2528858-2528977:1:exon
so has part: feature:2529292-2529369:1:exon
so has part: feature:2529696-2529800:1:exon
so has part: feature:2529897-2529965:1:exon
so has part: feature:2530179-2530280:1:exon
so has part: feature:2531294-2531353:1:exon

XP_030781887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2501966-2502067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2502728-2502804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2505289-2505373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2514942-2515082:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2515401-2515504:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2517886-2517975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2518065-2518170:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2519204-2519315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2523692-2523736:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2523993-2524046:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2525752-2525880:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2526921-2527027:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2528858-2528977:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2529292-2529369:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2529696-2529800:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2529897-2529965:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2530179-2530280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2531294-2531353:1:exon

RMC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: RMC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of MON1-CCZ1 complex isoform X5
translation: MYCPESAVILLSTTVLENVLQPFHFRAGTMSKLPKFEIELPAAPKSTKPSLSERDIAMATVYGQLYVLFLRHHSRTSNSTGAEVVLYHLPREGACKKMHILKLNRTGKFALNVVDNLVVVHHQDTETSVIFDIKLRGEFDGSVTFHHPVLPARSIQPYQIPIAGPAAVTSQSPVPCKLYSSSWIVFQPDIIISASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQRKECKMVILSVCSQMLSESDRASLPVIATVFDKLNHEYKKYLDAEQSYAMAVEAGQSRSSPLLKRPVRTQAVLDQSDVYTHVLSAFVEKKEMPHKFVIAVLMEYIRSLNQFQIAVQHYLHELVIKTLVQHNLFYMLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLSTANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTEDNMLFYTIFRFFEQRNQRLRGSPNFTPGEHCEEHVAFFKQIFGDQALMRPTTF
SIO_010081: RMC1
subclass of: SO_0000673
so part of: RMC1
location: join(2515005..2515082,2515401..2515504,2517886..2517975,2518065..2518170,2519204..2519315,2523692..2523736,2523993..2524046,2525752..2525880,2526921..2527027,2528858..2528977,2529292..2529369,2529696..2529800,2529897..2529965,2530055..2530280,2531294..2531373)
location: region:2515005-2531373:1
so has part: feature:2515005-2515082:1:exon
so has part: feature:2515401-2515504:1:exon
so has part: feature:2517886-2517975:1:exon
so has part: feature:2518065-2518170:1:exon
so has part: feature:2519204-2519315:1:exon
so has part: feature:2523692-2523736:1:exon
so has part: feature:2523993-2524046:1:exon
so has part: feature:2525752-2525880:1:exon
so has part: feature:2526921-2527027:1:exon
so has part: feature:2528858-2528977:1:exon
so has part: feature:2529292-2529369:1:exon
so has part: feature:2529696-2529800:1:exon
so has part: feature:2529897-2529965:1:exon
so has part: feature:2530055-2530280:1:exon
so has part: feature:2531294-2531373:1:exon

XP_030781886.1
type: Protein
SIO_000068: ncbiprotein

position:2515005:1
position: 2515005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2515005-2515082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2515401-2515504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2517886-2517975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2518065-2518170:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2519204-2519315:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2523692-2523736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2523993-2524046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2525752-2525880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2526921-2527027:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2528858-2528977:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2529292-2529369:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2529696-2529800:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2529897-2529965:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2530055-2530280:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2531294-2531373:1:exon

NPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: NPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2526728..2588077)
location: region:2526728-2588077:-1
so has part: feature:2526728-2588077:-1:exon
subclass of: SO_0000010

104678048
type: Gene
SIO_000068: ncbigene

position:2526728:-1
position: 2526728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2588077:-1
position: 2588077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2526728-2588077:-1:exon

NPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: NPC1
product: NPC intracellular cholesterol transporter 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 184 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030926023.1
SIO_010081: NPC1
subclass of: SO_0000673
so part of: NPC1
location: complement(join(2526728..2527561,2533001..2533163,2534042..2534155,2535054..2535285,2536267..2536467,2538387..2538516,2539197..2539312,2539651..2539841,2540276..2540365,2540909..2541049,2541147..2541274,2543305..2543419,2544167..2544349,2544779..2544968,2548140..2548242,2552589..2552689,2556346..2556572,2558136..2558557,2559010..2559083,2561917..2562166,2563043..2563210,2570536..2570711,2574087..2574193,2575473..2575595,2587423..2588077))
location: region:2526728-2588077:-1
so has part: feature:2587423-2588077:-1:exon
so has part: feature:2575473-2575595:-1:exon
so has part: feature:2574087-2574193:-1:exon
so has part: feature:2570536-2570711:-1:exon
so has part: feature:2563043-2563210:-1:exon
so has part: feature:2561917-2562166:-1:exon
so has part: feature:2559010-2559083:-1:exon
so has part: feature:2558136-2558557:-1:exon
so has part: feature:2556346-2556572:-1:exon
so has part: feature:2552589-2552689:-1:exon
so has part: feature:2548140-2548242:-1:exon
so has part: feature:2544779-2544968:-1:exon
so has part: feature:2544167-2544349:-1:exon
so has part: feature:2543305-2543419:-1:exon
so has part: feature:2541147-2541274:-1:exon
so has part: feature:2540909-2541049:-1:exon
so has part: feature:2540276-2540365:-1:exon
so has part: feature:2539651-2539841:-1:exon
so has part: feature:2539197-2539312:-1:exon
so has part: feature:2538387-2538516:-1:exon
so has part: feature:2536267-2536467:-1:exon
so has part: feature:2535054-2535285:-1:exon
so has part: feature:2534042-2534155:-1:exon
so has part: feature:2533001-2533163:-1:exon
so has part: feature:2526728-2527561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2587423-2588077:-1:exon

position:2587423:-1
position: 2587423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2575473-2575595:-1:exon

position:2575473:-1
position: 2575473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2575595:-1
position: 2575595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2574087-2574193:-1:exon

position:2574087:-1
position: 2574087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2574193:-1
position: 2574193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2570536-2570711:-1:exon

position:2570536:-1
position: 2570536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2570711:-1
position: 2570711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2563043-2563210:-1:exon

position:2563043:-1
position: 2563043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2563210:-1
position: 2563210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2561917-2562166:-1:exon

position:2561917:-1
position: 2561917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2562166:-1
position: 2562166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2559010-2559083:-1:exon

position:2559010:-1
position: 2559010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2559083:-1
position: 2559083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2558136-2558557:-1:exon

position:2558136:-1
position: 2558136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2558557:-1
position: 2558557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2556346-2556572:-1:exon

position:2556346:-1
position: 2556346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2556572:-1
position: 2556572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2552589-2552689:-1:exon

position:2552589:-1
position: 2552589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2552689:-1
position: 2552689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2548140-2548242:-1:exon

position:2548140:-1
position: 2548140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2548242:-1
position: 2548242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2544779-2544968:-1:exon

position:2544779:-1
position: 2544779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2544968:-1
position: 2544968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2544167-2544349:-1:exon

position:2544167:-1
position: 2544167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2544349:-1
position: 2544349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2543305-2543419:-1:exon

position:2543305:-1
position: 2543305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2543419:-1
position: 2543419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2541147-2541274:-1:exon

position:2541147:-1
position: 2541147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2541274:-1
position: 2541274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2540909-2541049:-1:exon

position:2540909:-1
position: 2540909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2541049:-1
position: 2541049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2540276-2540365:-1:exon

position:2540276:-1
position: 2540276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2540365:-1
position: 2540365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2539651-2539841:-1:exon

position:2539651:-1
position: 2539651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2539841:-1
position: 2539841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2539197-2539312:-1:exon

position:2539197:-1
position: 2539197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2539312:-1
position: 2539312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2538387-2538516:-1:exon

position:2538387:-1
position: 2538387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2538516:-1
position: 2538516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2536267-2536467:-1:exon

position:2536267:-1
position: 2536267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2536467:-1
position: 2536467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2535054-2535285:-1:exon

position:2535054:-1
position: 2535054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2535285:-1
position: 2535285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2534042-2534155:-1:exon

position:2534042:-1
position: 2534042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2534155:-1
position: 2534155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2533001-2533163:-1:exon

position:2533001:-1
position: 2533001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2533163:-1
position: 2533163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2526728-2527561:-1:exon

position:2527561:-1
position: 2527561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: NPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NPC intracellular cholesterol transporter 1 isoform X3
translation: MTARGLALGLLLLLLCPAQVFSQSCVWYGECGIAYGDKRYNCEYFGPPKPLPKDGYDLVQELCPGFFFGNVSLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKELQYFVGQSFANAMYNACRDVEAPSSNDKALGLLCGKDTDACNATNWIEYMFNKDNGQAPFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSCQDCSIVCGPKPQPPPPPAPWTILGLDAMYVIMWITYMAFLLVFFGAFFAVWCYRKRYFVSEYTPIDSNIAFSVNASDKGMAWLLTSTLPSSPALPGEASCCDPVSAAFEGCLRRLFTRWGSFCIRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPVDLWSAPSSQARREKEYFDQHFGPFFRTEQLIIRAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYNNETVTLQDICLAPLSPYNTNCTIMSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINLVRNYKNPNLTISFSAERSIEDELNRESDSDIFTIVISYAIMFLYISLALGHIKSCRRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLLGLDINRQEKNRLDIFCCVRGAEDGTSVQASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQFLSMPDDSYVVDYFKSISQYLHAGPPVYFVLEEGHDYTSPKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFDWVKPQSSCCRVDNVTGQFCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGTRVGATYFMTYHTVLQTSTDFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGDTMYE
SIO_010081: NPC1
subclass of: SO_0000673
so part of: NPC1
location: complement(join(2527542..2527561,2533001..2533163,2534042..2534155,2535054..2535285,2536267..2536467,2538387..2538516,2539197..2539312,2539651..2539841,2540276..2540365,2540909..2541049,2541147..2541274,2543305..2543419,2544167..2544349,2544779..2544968,2548140..2548242,2552589..2552689,2556346..2556572,2558136..2558557,2559010..2559083,2561917..2562166,2563043..2563210,2570536..2570711,2574087..2574193,2575473..2575595,2587423..2587479))
location: region:2527542-2587479:-1
so has part: feature:2587423-2587479:-1:exon
so has part: feature:2575473-2575595:-1:exon
so has part: feature:2574087-2574193:-1:exon
so has part: feature:2570536-2570711:-1:exon
so has part: feature:2563043-2563210:-1:exon
so has part: feature:2561917-2562166:-1:exon
so has part: feature:2559010-2559083:-1:exon
so has part: feature:2558136-2558557:-1:exon
so has part: feature:2556346-2556572:-1:exon
so has part: feature:2552589-2552689:-1:exon
so has part: feature:2548140-2548242:-1:exon
so has part: feature:2544779-2544968:-1:exon
so has part: feature:2544167-2544349:-1:exon
so has part: feature:2543305-2543419:-1:exon
so has part: feature:2541147-2541274:-1:exon
so has part: feature:2540909-2541049:-1:exon
so has part: feature:2540276-2540365:-1:exon
so has part: feature:2539651-2539841:-1:exon
so has part: feature:2539197-2539312:-1:exon
so has part: feature:2538387-2538516:-1:exon
so has part: feature:2536267-2536467:-1:exon
so has part: feature:2535054-2535285:-1:exon
so has part: feature:2534042-2534155:-1:exon
so has part: feature:2533001-2533163:-1:exon
so has part: feature:2527542-2527561:-1:exon

XP_030781883.1
type: Protein
SIO_000068: ncbiprotein

position:2527542:-1
position: 2527542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2587479:-1
position: 2587479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2587423-2587479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2575473-2575595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2574087-2574193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2570536-2570711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2563043-2563210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2561917-2562166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2559010-2559083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558136-2558557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2556346-2556572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2552589-2552689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2548140-2548242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2544779-2544968:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2544167-2544349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2543305-2543419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2541147-2541274:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2540909-2541049:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2540276-2540365:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2539651-2539841:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2539197-2539312:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2538387-2538516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2536267-2536467:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2535054-2535285:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2534042-2534155:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2533001-2533163:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2527542-2527561:-1:exon

NPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: NPC1
product: NPC intracellular cholesterol transporter 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 318 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_030926022.1
SIO_010081: NPC1
subclass of: SO_0000673
so part of: NPC1
location: complement(join(2531172..2531951,2533001..2533163,2534042..2534155,2535054..2535285,2536267..2536467,2538387..2538516,2539197..2539312,2539651..2539841,2540276..2540365,2540909..2541049,2541147..2541274,2543305..2543419,2544167..2544349,2544779..2544968,2548140..2548242,2552589..2552689,2556346..2556572,2558136..2558506,2559010..2559083,2561917..2562166,2563043..2563210,2570536..2570711,2574087..2574193,2575473..2575595,2587423..2588077))
location: region:2531172-2588077:-1
so has part: feature:2587423-2588077:-1:exon
so has part: feature:2575473-2575595:-1:exon
so has part: feature:2574087-2574193:-1:exon
so has part: feature:2570536-2570711:-1:exon
so has part: feature:2563043-2563210:-1:exon
so has part: feature:2561917-2562166:-1:exon
so has part: feature:2559010-2559083:-1:exon
so has part: feature:2558136-2558506:-1:exon
so has part: feature:2556346-2556572:-1:exon
so has part: feature:2552589-2552689:-1:exon
so has part: feature:2548140-2548242:-1:exon
so has part: feature:2544779-2544968:-1:exon
so has part: feature:2544167-2544349:-1:exon
so has part: feature:2543305-2543419:-1:exon
so has part: feature:2541147-2541274:-1:exon
so has part: feature:2540909-2541049:-1:exon
so has part: feature:2540276-2540365:-1:exon
so has part: feature:2539651-2539841:-1:exon
so has part: feature:2539197-2539312:-1:exon
so has part: feature:2538387-2538516:-1:exon
so has part: feature:2536267-2536467:-1:exon
so has part: feature:2535054-2535285:-1:exon
so has part: feature:2534042-2534155:-1:exon
so has part: feature:2533001-2533163:-1:exon
so has part: feature:2531172-2531951:-1:exon

position:2531172:-1
position: 2531172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2587423-2588077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2575473-2575595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2574087-2574193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2570536-2570711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2563043-2563210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2561917-2562166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2559010-2559083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558136-2558506:-1:exon

position:2558506:-1
position: 2558506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2556346-2556572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2552589-2552689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2548140-2548242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2544779-2544968:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2544167-2544349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2543305-2543419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2541147-2541274:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2540909-2541049:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2540276-2540365:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2539651-2539841:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2539197-2539312:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2538387-2538516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2536267-2536467:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2535054-2535285:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2534042-2534155:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2533001-2533163:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2531172-2531951:-1:exon

position:2531951:-1
position: 2531951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: NPC1
product: NPC intracellular cholesterol transporter 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 304 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_030926021.1
SIO_010081: NPC1
subclass of: SO_0000673
so part of: NPC1
location: complement(join(2531172..2531951,2533001..2533163,2534042..2534155,2535054..2535285,2536267..2536467,2538387..2538516,2539197..2539312,2539651..2539841,2540276..2540365,2540909..2541049,2541147..2541274,2543305..2543419,2544167..2544349,2544779..2544968,2548140..2548242,2552589..2552689,2556346..2556572,2558136..2558557,2559010..2559083,2561917..2562166,2563043..2563210,2570536..2570711,2574087..2574193,2575473..2575595,2587423..2588077))
location: region:2531172-2588077:-1
so has part: feature:2587423-2588077:-1:exon
so has part: feature:2575473-2575595:-1:exon
so has part: feature:2574087-2574193:-1:exon
so has part: feature:2570536-2570711:-1:exon
so has part: feature:2563043-2563210:-1:exon
so has part: feature:2561917-2562166:-1:exon
so has part: feature:2559010-2559083:-1:exon
so has part: feature:2558136-2558557:-1:exon
so has part: feature:2556346-2556572:-1:exon
so has part: feature:2552589-2552689:-1:exon
so has part: feature:2548140-2548242:-1:exon
so has part: feature:2544779-2544968:-1:exon
so has part: feature:2544167-2544349:-1:exon
so has part: feature:2543305-2543419:-1:exon
so has part: feature:2541147-2541274:-1:exon
so has part: feature:2540909-2541049:-1:exon
so has part: feature:2540276-2540365:-1:exon
so has part: feature:2539651-2539841:-1:exon
so has part: feature:2539197-2539312:-1:exon
so has part: feature:2538387-2538516:-1:exon
so has part: feature:2536267-2536467:-1:exon
so has part: feature:2535054-2535285:-1:exon
so has part: feature:2534042-2534155:-1:exon
so has part: feature:2533001-2533163:-1:exon
so has part: feature:2531172-2531951:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2587423-2588077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2575473-2575595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2574087-2574193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2570536-2570711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2563043-2563210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2561917-2562166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2559010-2559083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558136-2558557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2556346-2556572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2552589-2552689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2548140-2548242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2544779-2544968:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2544167-2544349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2543305-2543419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2541147-2541274:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2540909-2541049:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2540276-2540365:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2539651-2539841:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2539197-2539312:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2538387-2538516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2536267-2536467:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2535054-2535285:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2534042-2534155:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2533001-2533163:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2531172-2531951:-1:exon

NPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: NPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NPC intracellular cholesterol transporter 1 isoform X2
translation: MTARGLALGLLLLLLCPAQVFSQSCVWYGECGIAYGDKRYNCEYFGPPKPLPKDGYDLVQELCPGFFFGNVSLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKELQYFVGQSFANAMYNACRDVEAPSSNDKALGLLCGKDTDACNATNWIEYMFNKDNGQAPFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSCQDCSIVCGPKPQPPPPPAPWTILGLDAMYVIMWITYMAFLLVFFGAFFAVWCYRKRYFVSEYTPIDSNIAFSVNASDKGEASCCDPVSAAFEGCLRRLFTRWGSFCIRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPVDLWSAPSSQARREKEYFDQHFGPFFRTEQLIIRAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYNNETVTLQDICLAPLSPYNTNCTIMSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINLVRNYKNPNLTISFSAERSIEDELNRESDSDIFTIVISYAIMFLYISLALGHIKSCRRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLLGLDINRQEKNRLDIFCCVRGAEDGTSVQASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQFLSMPDDSYVVDYFKSISQYLHAGPPVYFVLEEGHDYTSPKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFDWVKPQSSCCRVDNVTGQFCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGTRVGATYFMTYHTVLQTSTDFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKSCATEERYKGTERERLLNF
SIO_010081: NPC1
subclass of: SO_0000673
so part of: NPC1
location: complement(join(2531869..2531951,2533001..2533163,2534042..2534155,2535054..2535285,2536267..2536467,2538387..2538516,2539197..2539312,2539651..2539841,2540276..2540365,2540909..2541049,2541147..2541274,2543305..2543419,2544167..2544349,2544779..2544968,2548140..2548242,2552589..2552689,2556346..2556572,2558136..2558506,2559010..2559083,2561917..2562166,2563043..2563210,2570536..2570711,2574087..2574193,2575473..2575595,2587423..2587479))
location: region:2531869-2587479:-1
so has part: feature:2587423-2587479:-1:exon
so has part: feature:2575473-2575595:-1:exon
so has part: feature:2574087-2574193:-1:exon
so has part: feature:2570536-2570711:-1:exon
so has part: feature:2563043-2563210:-1:exon
so has part: feature:2561917-2562166:-1:exon
so has part: feature:2559010-2559083:-1:exon
so has part: feature:2558136-2558506:-1:exon
so has part: feature:2556346-2556572:-1:exon
so has part: feature:2552589-2552689:-1:exon
so has part: feature:2548140-2548242:-1:exon
so has part: feature:2544779-2544968:-1:exon
so has part: feature:2544167-2544349:-1:exon
so has part: feature:2543305-2543419:-1:exon
so has part: feature:2541147-2541274:-1:exon
so has part: feature:2540909-2541049:-1:exon
so has part: feature:2540276-2540365:-1:exon
so has part: feature:2539651-2539841:-1:exon
so has part: feature:2539197-2539312:-1:exon
so has part: feature:2538387-2538516:-1:exon
so has part: feature:2536267-2536467:-1:exon
so has part: feature:2535054-2535285:-1:exon
so has part: feature:2534042-2534155:-1:exon
so has part: feature:2533001-2533163:-1:exon
so has part: feature:2531869-2531951:-1:exon

XP_030781882.1
type: Protein
SIO_000068: ncbiprotein

position:2531869:-1
position: 2531869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2587423-2587479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2575473-2575595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2574087-2574193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2570536-2570711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2563043-2563210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2561917-2562166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2559010-2559083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558136-2558506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2556346-2556572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2552589-2552689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2548140-2548242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2544779-2544968:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2544167-2544349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2543305-2543419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2541147-2541274:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2540909-2541049:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2540276-2540365:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2539651-2539841:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2539197-2539312:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2538387-2538516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2536267-2536467:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2535054-2535285:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2534042-2534155:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2533001-2533163:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2531869-2531951:-1:exon

NPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: NPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NPC intracellular cholesterol transporter 1 isoform X1
translation: MTARGLALGLLLLLLCPAQVFSQSCVWYGECGIAYGDKRYNCEYFGPPKPLPKDGYDLVQELCPGFFFGNVSLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTNVKELQYFVGQSFANAMYNACRDVEAPSSNDKALGLLCGKDTDACNATNWIEYMFNKDNGQAPFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSCQDCSIVCGPKPQPPPPPAPWTILGLDAMYVIMWITYMAFLLVFFGAFFAVWCYRKRYFVSEYTPIDSNIAFSVNASDKGMAWLLTSTLPSSPALPGEASCCDPVSAAFEGCLRRLFTRWGSFCIRNPGCVIFFSLVFIAVCSSGLVFVRVTTNPVDLWSAPSSQARREKEYFDQHFGPFFRTEQLIIRAPLTDKHIYQPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYNNETVTLQDICLAPLSPYNTNCTIMSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINLVRNYKNPNLTISFSAERSIEDELNRESDSDIFTIVISYAIMFLYISLALGHIKSCRRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGLPLTLIVIEVIPFLVLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSLFAGLAVFIDFLLQITCFVSLLGLDINRQEKNRLDIFCCVRGAEDGTSVQASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIAVLNKVDIGLDQFLSMPDDSYVVDYFKSISQYLHAGPPVYFVLEEGHDYTSPKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFDWVKPQSSCCRVDNVTGQFCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGTRVGATYFMTYHTVLQTSTDFIDALKKARLIASNVTETMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTMVLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSVNKAKSCATEERYKGTERERLLNF
SIO_010081: NPC1
subclass of: SO_0000673
so part of: NPC1
location: complement(join(2531869..2531951,2533001..2533163,2534042..2534155,2535054..2535285,2536267..2536467,2538387..2538516,2539197..2539312,2539651..2539841,2540276..2540365,2540909..2541049,2541147..2541274,2543305..2543419,2544167..2544349,2544779..2544968,2548140..2548242,2552589..2552689,2556346..2556572,2558136..2558557,2559010..2559083,2561917..2562166,2563043..2563210,2570536..2570711,2574087..2574193,2575473..2575595,2587423..2587479))
location: region:2531869-2587479:-1
so has part: feature:2587423-2587479:-1:exon
so has part: feature:2575473-2575595:-1:exon
so has part: feature:2574087-2574193:-1:exon
so has part: feature:2570536-2570711:-1:exon
so has part: feature:2563043-2563210:-1:exon
so has part: feature:2561917-2562166:-1:exon
so has part: feature:2559010-2559083:-1:exon
so has part: feature:2558136-2558557:-1:exon
so has part: feature:2556346-2556572:-1:exon
so has part: feature:2552589-2552689:-1:exon
so has part: feature:2548140-2548242:-1:exon
so has part: feature:2544779-2544968:-1:exon
so has part: feature:2544167-2544349:-1:exon
so has part: feature:2543305-2543419:-1:exon
so has part: feature:2541147-2541274:-1:exon
so has part: feature:2540909-2541049:-1:exon
so has part: feature:2540276-2540365:-1:exon
so has part: feature:2539651-2539841:-1:exon
so has part: feature:2539197-2539312:-1:exon
so has part: feature:2538387-2538516:-1:exon
so has part: feature:2536267-2536467:-1:exon
so has part: feature:2535054-2535285:-1:exon
so has part: feature:2534042-2534155:-1:exon
so has part: feature:2533001-2533163:-1:exon
so has part: feature:2531869-2531951:-1:exon

XP_030781881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2587423-2587479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2575473-2575595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2574087-2574193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2570536-2570711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2563043-2563210:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2561917-2562166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2559010-2559083:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2558136-2558557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2556346-2556572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2552589-2552689:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2548140-2548242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2544779-2544968:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2544167-2544349:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2543305-2543419:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2541147-2541274:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2540909-2541049:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2540276-2540365:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2539651-2539841:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2539197-2539312:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2538387-2538516:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2536267-2536467:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2535054-2535285:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2534042-2534155:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2533001-2533163:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2531869-2531951:-1:exon

ANKRD29
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: ANKRD29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2588735..2665720)
location: region:2588735-2665720:-1
so has part: feature:2588735-2665720:-1:exon
subclass of: SO_0000010

104678041
type: Gene
SIO_000068: ncbigene

position:2588735:-1
position: 2588735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665720:-1
position: 2665720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2588735-2665720:-1:exon

ANKRD29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ANKRD29
product: ankyrin repeat domain 29, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926029.1
SIO_010081: ANKRD29
subclass of: SO_0000673
so part of: ANKRD29
location: complement(join(2588735..2588877,2613515..2613613,2618795..2618890,2620552..2620650,2630661..2630759,2635092..2635190,2640544..2640642,2647733..2647831,2650635..2650745,2665519..2665701))
location: region:2588735-2665701:-1
so has part: feature:2665519-2665701:-1:exon
so has part: feature:2650635-2650745:-1:exon
so has part: feature:2647733-2647831:-1:exon
so has part: feature:2640544-2640642:-1:exon
so has part: feature:2635092-2635190:-1:exon
so has part: feature:2630661-2630759:-1:exon
so has part: feature:2620552-2620650:-1:exon
so has part: feature:2618795-2618890:-1:exon
so has part: feature:2613515-2613613:-1:exon
so has part: feature:2588735-2588877:-1:exon

position:2665701:-1
position: 2665701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665519-2665701:-1:exon

position:2665519:-1
position: 2665519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2650635-2650745:-1:exon

position:2650635:-1
position: 2650635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2650745:-1
position: 2650745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2647733-2647831:-1:exon

position:2647733:-1
position: 2647733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2647831:-1
position: 2647831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2640544-2640642:-1:exon

position:2640544:-1
position: 2640544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2640642:-1
position: 2640642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2635092-2635190:-1:exon

position:2635092:-1
position: 2635092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2635190:-1
position: 2635190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2630661-2630759:-1:exon

position:2630661:-1
position: 2630661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2630759:-1
position: 2630759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2620552-2620650:-1:exon

position:2620552:-1
position: 2620552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2620650:-1
position: 2620650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2618795-2618890:-1:exon

position:2618795:-1
position: 2618795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2618890:-1
position: 2618890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2613515-2613613:-1:exon

position:2613515:-1
position: 2613515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2613613:-1
position: 2613613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2588735-2588877:-1:exon

position:2588877:-1
position: 2588877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ANKRD29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 29 isoform X2
translation: MCRMSFKKETPLANAAFWAARRGNLALLKLLLNSGRVDVDCRDSHGTTLLMVAAYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTEFRTKDGATALLAASQYGHMQVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLASGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNDVIEELLKFSPTLGILKNGTSALHAAVLSGNIKTVALLLEAGADPSLRNKRESCYIARAENLHF
SIO_010081: ANKRD29
subclass of: SO_0000673
so part of: ANKRD29
location: complement(join(2588833..2588877,2613515..2613613,2618795..2618890,2620552..2620650,2630661..2630759,2635092..2635190,2640544..2640642,2647733..2647831,2650635..2650745,2665519..2665539))
location: region:2588833-2665539:-1
so has part: feature:2665519-2665539:-1:exon
so has part: feature:2650635-2650745:-1:exon
so has part: feature:2647733-2647831:-1:exon
so has part: feature:2640544-2640642:-1:exon
so has part: feature:2635092-2635190:-1:exon
so has part: feature:2630661-2630759:-1:exon
so has part: feature:2620552-2620650:-1:exon
so has part: feature:2618795-2618890:-1:exon
so has part: feature:2613515-2613613:-1:exon
so has part: feature:2588833-2588877:-1:exon

XP_030781889.1
type: Protein
SIO_000068: ncbiprotein

position:2588833:-1
position: 2588833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665539:-1
position: 2665539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665519-2665539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2650635-2650745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2647733-2647831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2640544-2640642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2635092-2635190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2630661-2630759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2620552-2620650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2618795-2618890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2613515-2613613:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2588833-2588877:-1:exon

ANKRD29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ANKRD29
product: ankyrin repeat domain 29, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 64 ESTs, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030926030.1
SIO_010081: ANKRD29
subclass of: SO_0000673
so part of: ANKRD29
location: complement(join(2600038..2602399,2618795..2618890,2620552..2620650,2630661..2630759,2635092..2635190,2640544..2640642,2647733..2647831,2650635..2650745,2665519..2665720))
location: region:2600038-2665720:-1
so has part: feature:2665519-2665720:-1:exon
so has part: feature:2650635-2650745:-1:exon
so has part: feature:2647733-2647831:-1:exon
so has part: feature:2640544-2640642:-1:exon
so has part: feature:2635092-2635190:-1:exon
so has part: feature:2630661-2630759:-1:exon
so has part: feature:2620552-2620650:-1:exon
so has part: feature:2618795-2618890:-1:exon
so has part: feature:2600038-2602399:-1:exon

position:2600038:-1
position: 2600038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665519-2665720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2650635-2650745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2647733-2647831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2640544-2640642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2635092-2635190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2630661-2630759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2620552-2620650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2618795-2618890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2600038-2602399:-1:exon

position:2602399:-1
position: 2602399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ANKRD29
product: ankyrin repeat domain 29, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 69 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030926028.1
SIO_010081: ANKRD29
subclass of: SO_0000673
so part of: ANKRD29
location: complement(join(2600038..2602399,2613515..2613613,2618795..2618890,2620552..2620650,2630661..2630759,2635092..2635190,2640544..2640642,2647733..2647831,2650635..2650745,2665519..2665720))
location: region:2600038-2665720:-1
so has part: feature:2665519-2665720:-1:exon
so has part: feature:2650635-2650745:-1:exon
so has part: feature:2647733-2647831:-1:exon
so has part: feature:2640544-2640642:-1:exon
so has part: feature:2635092-2635190:-1:exon
so has part: feature:2630661-2630759:-1:exon
so has part: feature:2620552-2620650:-1:exon
so has part: feature:2618795-2618890:-1:exon
so has part: feature:2613515-2613613:-1:exon
so has part: feature:2600038-2602399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2665519-2665720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2650635-2650745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2647733-2647831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2640544-2640642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2635092-2635190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2630661-2630759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2620552-2620650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2618795-2618890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2613515-2613613:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2600038-2602399:-1:exon

ANKRD29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: ANKRD29
product: ankyrin repeat domain 29, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926031.1
SIO_010081: ANKRD29
subclass of: SO_0000673
so part of: ANKRD29
location: complement(join(2600038..2602399,2613515..2613613,2618795..2618890,2620552..2620650,2630661..2630759,2635092..2635190,2640544..2640642,2647733..2647831,2650627..2650731))
location: region:2600038-2650731:-1
so has part: feature:2650627-2650731:-1:exon
so has part: feature:2647733-2647831:-1:exon
so has part: feature:2640544-2640642:-1:exon
so has part: feature:2635092-2635190:-1:exon
so has part: feature:2630661-2630759:-1:exon
so has part: feature:2620552-2620650:-1:exon
so has part: feature:2618795-2618890:-1:exon
so has part: feature:2613515-2613613:-1:exon
so has part: feature:2600038-2602399:-1:exon

position:2650731:-1
position: 2650731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2650627-2650731:-1:exon

position:2650627:-1
position: 2650627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2647733-2647831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2640544-2640642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2635092-2635190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2630661-2630759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2620552-2620650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2618795-2618890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2613515-2613613:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2600038-2602399:-1:exon

ANKRD29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ANKRD29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 29 isoform X3
translation: MCRMSFKKETPLANAAFWAARRGNLALLKLLLNSGRVDVDCRDSHGTTLLMVAAYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTEFRTKDGATALLAASQYGHMQVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLASGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNDVIEELLKFSPTLGILKANELPAELTKNERILRLLRSKEGPRKS
SIO_010081: ANKRD29
subclass of: SO_0000673
so part of: ANKRD29
location: complement(join(2602316..2602399,2618795..2618890,2620552..2620650,2630661..2630759,2635092..2635190,2640544..2640642,2647733..2647831,2650635..2650745,2665519..2665539))
location: region:2602316-2665539:-1
so has part: feature:2665519-2665539:-1:exon
so has part: feature:2650635-2650745:-1:exon
so has part: feature:2647733-2647831:-1:exon
so has part: feature:2640544-2640642:-1:exon
so has part: feature:2635092-2635190:-1:exon
so has part: feature:2630661-2630759:-1:exon
so has part: feature:2620552-2620650:-1:exon
so has part: feature:2618795-2618890:-1:exon
so has part: feature:2602316-2602399:-1:exon

XP_030781890.1
type: Protein
SIO_000068: ncbiprotein

position:2602316:-1
position: 2602316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2665519-2665539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2650635-2650745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2647733-2647831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2640544-2640642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2635092-2635190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2630661-2630759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2620552-2620650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2618795-2618890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2602316-2602399:-1:exon

ANKRD29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ANKRD29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 29 isoform X1
translation: MCRMSFKKETPLANAAFWAARRGNLALLKLLLNSGRVDVDCRDSHGTTLLMVAAYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTEFRTKDGATALLAASQYGHMQVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLASGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNDVIEELLKFSPTLGILKNGTSALHAAVLSGNIKTVALLLEAGADPSLRNKANELPAELTKNERILRLLRSKEGPRKS
SIO_010081: ANKRD29
subclass of: SO_0000673
so part of: ANKRD29
location: complement(join(2602316..2602399,2613515..2613613,2618795..2618890,2620552..2620650,2630661..2630759,2635092..2635190,2640544..2640642,2647733..2647831,2650635..2650745,2665519..2665539))
location: region:2602316-2665539:-1
so has part: feature:2665519-2665539:-1:exon
so has part: feature:2650635-2650745:-1:exon
so has part: feature:2647733-2647831:-1:exon
so has part: feature:2640544-2640642:-1:exon
so has part: feature:2635092-2635190:-1:exon
so has part: feature:2630661-2630759:-1:exon
so has part: feature:2620552-2620650:-1:exon
so has part: feature:2618795-2618890:-1:exon
so has part: feature:2613515-2613613:-1:exon
so has part: feature:2602316-2602399:-1:exon

XP_030781888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2665519-2665539:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2650635-2650745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2647733-2647831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2640544-2640642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2635092-2635190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2630661-2630759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2620552-2620650:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2618795-2618890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2613515-2613613:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2602316-2602399:-1:exon

ANKRD29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: ANKRD29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 29 isoform X4
translation: MHGTTLLMVAAYAGHIDCVRELVLQGADINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTEFRTKDGATALLAASQYGHMQVVETLLKHGANIHDQLYDGATALFLAAQGGYLDVIRLLLASGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARNDGTTALLKAANKGYNDVIEELLKFSPTLGILKNGTSALHAAVLSGNIKTVALLLEAGADPSLRNKANELPAELTKNERILRLLRSKEGPRKS
SIO_010081: ANKRD29
subclass of: SO_0000673
so part of: ANKRD29
location: complement(join(2602316..2602399,2613515..2613613,2618795..2618890,2620552..2620650,2630661..2630759,2635092..2635190,2640544..2640642,2647733..2647831,2650627..2650629))
location: region:2602316-2650629:-1
so has part: feature:2650627-2650629:-1:exon
so has part: feature:2647733-2647831:-1:exon
so has part: feature:2640544-2640642:-1:exon
so has part: feature:2635092-2635190:-1:exon
so has part: feature:2630661-2630759:-1:exon
so has part: feature:2620552-2620650:-1:exon
so has part: feature:2618795-2618890:-1:exon
so has part: feature:2613515-2613613:-1:exon
so has part: feature:2602316-2602399:-1:exon

XP_030781891.1
type: Protein
SIO_000068: ncbiprotein

position:2650629:-1
position: 2650629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2650627-2650629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2647733-2647831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2640544-2640642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2635092-2635190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2630661-2630759:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2620552-2620650:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2618795-2618890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2613515-2613613:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2602316-2602399:-1:exon

LOC104678040
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2676156..2676655)
location: region:2676156-2676655:-1
so has part: feature:2676156-2676655:-1:exon

104678040
type: Gene
SIO_000068: ncbigene

position:2676156:-1
position: 2676156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2676655:-1
position: 2676655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2676156-2676655:-1:exon

LOC104678040
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC104678040
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC104678040
subclass of: SO_0000673
so part of: LOC104678040
location: complement(2676156..2676655)
location: region:2676156-2676655:-1
so has part: feature:2676156-2676655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2676156-2676655:-1:exon

LOC115895506
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2694060..2790317
location: region:2694060-2790317:1
so has part: feature:2694060-2790317:1:exon
subclass of: SO_0000010

115895506
type: Gene
SIO_000068: ncbigene

position:2694060:1
position: 2694060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2790317:1
position: 2790317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694060-2790317:1:exon

LOC115895506
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC115895506
product: laminin subunit alpha-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926088.1
SIO_010081: LOC115895506
subclass of: SO_0000673
so part of: LOC115895506
location: join(2694060..2694584,2717195..2717347,2760634..2760751,2762124..2762242,2763919..2764089,2767007..2767098,2771970..2772085,2775860..2775978,2790033..2790317)
location: region:2694060-2790317:1
so has part: feature:2694060-2694584:1:exon
so has part: feature:2717195-2717347:1:exon
so has part: feature:2760634-2760751:1:exon
so has part: feature:2762124-2762242:1:exon
so has part: feature:2763919-2764089:1:exon
so has part: feature:2767007-2767098:1:exon
so has part: feature:2771970-2772085:1:exon
so has part: feature:2775860-2775978:1:exon
so has part: feature:2790033-2790317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2694060-2694584:1:exon

position:2694584:1
position: 2694584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2717195-2717347:1:exon

position:2717195:1
position: 2717195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2717347:1
position: 2717347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2760634-2760751:1:exon

position:2760634:1
position: 2760634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760751:1
position: 2760751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2762124-2762242:1:exon

position:2762124:1
position: 2762124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2762242:1
position: 2762242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2763919-2764089:1:exon

position:2763919:1
position: 2763919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2764089:1
position: 2764089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2767007-2767098:1:exon

position:2767007:1
position: 2767007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2767098:1
position: 2767098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2771970-2772085:1:exon

position:2771970:1
position: 2771970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2772085:1
position: 2772085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2775860-2775978:1:exon

position:2775860:1
position: 2775860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2775978:1
position: 2775978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2790033-2790317:1:exon

position:2790033:1
position: 2790033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115895506
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC115895506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laminin subunit alpha-3-like
translation: MAAAARPRGRAPGPVLPPTPLLLLLLLVLPAWGATARDPGAAVGLSLHPPYFNLAEAARIWATATCGERGPGERRPRPELYCKLVGGPTAPGSGHTIQGQFCDYCNSEDPRKAHPVTNAIDGSERWWQSPPLSSGTQYNRVNLTLDLGQLFHVAYILIKFANSPRPDLWVLERSVDFGSTYSPWQYFAHSKVDCLKEFGREANMAVTQDDDVLCVTEYSRIVPLENGEVVVSLINGRPGAKNFTFSHTLREFTKATNIRLRFLRTNTLLGHLISKAQRDPTVTRRYYYSIKDISIGGRCVCNGHAEVCDANNPEKLFRCQCQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEACNCHGHASDCYYDSDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYYRPYGVPVDAPDGCIRKFHFKLVYLSLCVLPQRSHQANFGSVNNFLHAFSLQSISCARYVTSVTYTVSLNFGFIACKWK
SIO_010081: LOC115895506
subclass of: SO_0000673
so part of: LOC115895506
location: join(2694291..2694584,2717195..2717347,2760634..2760751,2762124..2762242,2763919..2764089,2767007..2767098,2771970..2772085,2775860..2775978,2790033..2790317)
location: region:2694291-2790317:1
so has part: feature:2694291-2694584:1:exon
so has part: feature:2717195-2717347:1:exon
so has part: feature:2760634-2760751:1:exon
so has part: feature:2762124-2762242:1:exon
so has part: feature:2763919-2764089:1:exon
so has part: feature:2767007-2767098:1:exon
so has part: feature:2771970-2772085:1:exon
so has part: feature:2775860-2775978:1:exon
so has part: feature:2790033-2790317:1:exon

XP_030781948.1
type: Protein
SIO_000068: ncbiprotein

position:2694291:1
position: 2694291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694291-2694584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2717195-2717347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2760634-2760751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2762124-2762242:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2763919-2764089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2767007-2767098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2771970-2772085:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2775860-2775978:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2790033-2790317:1:exon

LOC104678039
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2877564..2971985
location: region:2877564-2971985:1
so has part: feature:2877564-2971985:1:exon
subclass of: SO_0000010

104678039
type: Gene
SIO_000068: ncbigene

position:2877564:1
position: 2877564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2971985:1
position: 2971985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2877564-2971985:1:exon

LOC104678039
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678039
product: laminin subunit alpha-3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 148 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030926086.1
SIO_010081: LOC104678039
subclass of: SO_0000673
so part of: LOC104678039
location: join(2877564..2877823,2880854..2880952,2883941..2884024,2887550..2887780,2892379..2892492,2897989..2898098,2900868..2900948,2905945..2906051,2910184..2910234,2910796..2910947,2914800..2914910,2915038..2915149,2915376..2915543,2917207..2917403,2919075..2919191,2919882..2920036,2920503..2920644,2921476..2921578,2923780..2923896,2923986..2924165,2925348..2925490,2929092..2929262,2932005..2932156,2932310..2932472,2932917..2933050,2934157..2934301,2938505..2938624,2939023..2939156,2945683..2945800,2946185..2946325,2948465..2948604,2949557..2949688,2951175..2951328,2956373..2956536,2960613..2960796,2963239..2963379,2966566..2966725,2966831..2966961,2968610..2968703,2969929..2970048,2971426..2971985)
location: region:2877564-2971985:1
so has part: feature:2877564-2877823:1:exon
so has part: feature:2880854-2880952:1:exon
so has part: feature:2883941-2884024:1:exon
so has part: feature:2887550-2887780:1:exon
so has part: feature:2892379-2892492:1:exon
so has part: feature:2897989-2898098:1:exon
so has part: feature:2900868-2900948:1:exon
so has part: feature:2905945-2906051:1:exon
so has part: feature:2910184-2910234:1:exon
so has part: feature:2910796-2910947:1:exon
so has part: feature:2914800-2914910:1:exon
so has part: feature:2915038-2915149:1:exon
so has part: feature:2915376-2915543:1:exon
so has part: feature:2917207-2917403:1:exon
so has part: feature:2919075-2919191:1:exon
so has part: feature:2919882-2920036:1:exon
so has part: feature:2920503-2920644:1:exon
so has part: feature:2921476-2921578:1:exon
so has part: feature:2923780-2923896:1:exon
so has part: feature:2923986-2924165:1:exon
so has part: feature:2925348-2925490:1:exon
so has part: feature:2929092-2929262:1:exon
so has part: feature:2932005-2932156:1:exon
so has part: feature:2932310-2932472:1:exon
so has part: feature:2932917-2933050:1:exon
so has part: feature:2934157-2934301:1:exon
so has part: feature:2938505-2938624:1:exon
so has part: feature:2939023-2939156:1:exon
so has part: feature:2945683-2945800:1:exon
so has part: feature:2946185-2946325:1:exon
so has part: feature:2948465-2948604:1:exon
so has part: feature:2949557-2949688:1:exon
so has part: feature:2951175-2951328:1:exon
so has part: feature:2956373-2956536:1:exon
so has part: feature:2960613-2960796:1:exon
so has part: feature:2963239-2963379:1:exon
so has part: feature:2966566-2966725:1:exon
so has part: feature:2966831-2966961:1:exon
so has part: feature:2968610-2968703:1:exon
so has part: feature:2969929-2970048:1:exon
so has part: feature:2971426-2971985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2877564-2877823:1:exon

position:2877823:1
position: 2877823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2880854-2880952:1:exon

position:2880854:1
position: 2880854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2880952:1
position: 2880952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2883941-2884024:1:exon

position:2883941:1
position: 2883941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2884024:1
position: 2884024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2887550-2887780:1:exon

position:2887550:1
position: 2887550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2887780:1
position: 2887780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2892379-2892492:1:exon

position:2892379:1
position: 2892379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2892492:1
position: 2892492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2897989-2898098:1:exon

position:2897989:1
position: 2897989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2898098:1
position: 2898098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2900868-2900948:1:exon

position:2900868:1
position: 2900868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900948:1
position: 2900948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2905945-2906051:1:exon

position:2905945:1
position: 2905945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2906051:1
position: 2906051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2910184-2910234:1:exon

position:2910184:1
position: 2910184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2910234:1
position: 2910234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2910796-2910947:1:exon

position:2910796:1
position: 2910796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2910947:1
position: 2910947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2914800-2914910:1:exon

position:2914800:1
position: 2914800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2914910:1
position: 2914910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2915038-2915149:1:exon

position:2915038:1
position: 2915038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2915149:1
position: 2915149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2915376-2915543:1:exon

position:2915376:1
position: 2915376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2915543:1
position: 2915543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2917207-2917403:1:exon

position:2917207:1
position: 2917207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2917403:1
position: 2917403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2919075-2919191:1:exon

position:2919075:1
position: 2919075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2919191:1
position: 2919191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2919882-2920036:1:exon

position:2919882:1
position: 2919882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2920036:1
position: 2920036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2920503-2920644:1:exon

position:2920503:1
position: 2920503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2920644:1
position: 2920644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2921476-2921578:1:exon

position:2921476:1
position: 2921476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2921578:1
position: 2921578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2923780-2923896:1:exon

position:2923780:1
position: 2923780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2923896:1
position: 2923896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2923986-2924165:1:exon

position:2923986:1
position: 2923986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2924165:1
position: 2924165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2925348-2925490:1:exon

position:2925348:1
position: 2925348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2925490:1
position: 2925490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2929092-2929262:1:exon

position:2929092:1
position: 2929092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2929262:1
position: 2929262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2932005-2932156:1:exon

position:2932005:1
position: 2932005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2932156:1
position: 2932156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2932310-2932472:1:exon

position:2932310:1
position: 2932310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2932472:1
position: 2932472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2932917-2933050:1:exon

position:2932917:1
position: 2932917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2933050:1
position: 2933050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2934157-2934301:1:exon

position:2934157:1
position: 2934157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2934301:1
position: 2934301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2938505-2938624:1:exon

position:2938505:1
position: 2938505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2938624:1
position: 2938624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2939023-2939156:1:exon

position:2939023:1
position: 2939023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2939156:1
position: 2939156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2945683-2945800:1:exon

position:2945683:1
position: 2945683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945800:1
position: 2945800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2946185-2946325:1:exon

position:2946185:1
position: 2946185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2946325:1
position: 2946325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2948465-2948604:1:exon

position:2948465:1
position: 2948465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948604:1
position: 2948604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2949557-2949688:1:exon

position:2949557:1
position: 2949557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949688:1
position: 2949688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2951175-2951328:1:exon

position:2951175:1
position: 2951175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951328:1
position: 2951328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2956373-2956536:1:exon

position:2956373:1
position: 2956373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2956536:1
position: 2956536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2960613-2960796:1:exon

position:2960613:1
position: 2960613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2960796:1
position: 2960796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2963239-2963379:1:exon

position:2963239:1
position: 2963239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2963379:1
position: 2963379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2966566-2966725:1:exon

position:2966566:1
position: 2966566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2966725:1
position: 2966725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2966831-2966961:1:exon

position:2966831:1
position: 2966831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2966961:1
position: 2966961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2968610-2968703:1:exon

position:2968610:1
position: 2968610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2968703:1
position: 2968703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2969929-2970048:1:exon

position:2969929:1
position: 2969929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2970048:1
position: 2970048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2971426-2971985:1:exon

position:2971426:1
position: 2971426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104678039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laminin subunit alpha-3 isoform X1
translation: MLGWRLETADRMVIPVSFNPGSNSMVADLQELPATVHSASWVAPASYLGDKVSSYGGYLTYQAKSFGLPGDMVLLEKKPDVQLTGQHMSIIYEETNTPRPDRLHHGRVQVVEGNFRHASSRAPVSREELMTVLSRLADMRIQGLYFTETQRLTLSEVGLEEASDTGSGRRAYAVEMCACPPAYAGDSCQGCSPGYYRDHKGLYTGRCVPCNCNGHSNRCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCPHTNRFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQLGSCDPLTGDCINQEPKDSSPAEECDDCDSCVMTLLNDLATMGEQLRLVKSQLQGLSASAELLEQMRHVETQAKDLRNQLLNYRSAISNHGSKIEGLERELTGLNQEFETLQEKAQVNSRKAQTLYNNVNRAIQSAKELDMKIKTVIRNVHILLKQISGTDGEGNNVPSGDFSREWAEAQRMMRELRNRNFGKHLREAEADKRESQLLLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAARAKQANGLNQENERALGAIQRQVKEINSLQSDFTKYLTSADSSLLQTNIALQLMEKSQKEYEKLAASLNEARQELSDKVRELSRSAGKTSLVEEAEKHAQSLQELAKQLEEIKRNASGDELVRCAVDAATAYENILNAIKAAEDAANRAASASESALQTVIKEDLPRKAKTLSSNSDKLLNEAKMTQKKLKQEVHLALSNLQQTLNIVTVQKEVIATNLTTLRDGLRGIQRGDIDAMISSAKSMVRKANDITDEVLDGLNPIQTDVERIKDTYGSTQTEDFKKALTDADNSVNKLTNKLPDLWRKIESINQQLLPLGNISDNMDRIRELIQQARDAASKVAVPMRFNGKSGVEVRLPNDLEDLKGYTSLSLFLQRPNSRENGGTENMFVMYLGNKDASRDYIGMAVVDGQLTCVYNLGDRETELQVDQILTESETQEAVMDRVKFQRIYQFARLNYTKGATSSKPEIPGVYDMDGRNSNTLLNLDPENVVFYVGGYPPDFKLPSRLRFPPYKGCIELDDLNENVLSLYNFKKTFNLNTTEVEPCRRRKEESDKNYFEGTGYARVPTQPHASIPTFGQTIQTTVDRGLLFFTENGDRFISLNIEDGKLMVRYKLNSEPPKERGVGDAINNGRDHSIQIKIGKVQKRMWINVDFQNTIIDGEVFDFSTYYLGGIPIAIRERFNISTPAFRGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRSASFSRGGQLSFTNLGSPLTDHLQASFGFQTFQPSGVLLSLQTRTSTLQVTLEDGHIELSTRDSDGPIFKSPQTYMDGLLHYVSVISDNSGLRLLIDDQPLRNGQRPKRISSSQQSLRLGGSNFEGCISNVFVQRLSLSPEVLDLASNSLKRDVSLGGCSLNKPPFLMLLQGSTRFNKAKTSRINQLLQDTPVASPRSMKVWQDACSPLPRTQANHGALQFGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGLVFHTGTKNSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTVVFGHDGEKGRLVVDGLRAREGSLPGNSTVSIRGPVYLGSPPSGKPKSLPTNSFVGCLKNFQLDSKPLDTPSSSFGVSSCLGGPLEKGIYFSEEGGHVILAHSVLLGPEFKLVFSIRPRSLTGILIHIGSQPGKHLCVYLEAGKVTASMDSGAGGTSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPASTQEPLHLGGAPANLTTLRIPVWKSFFGCLRNIFVNHIPVPVTEALEVQGPVSLNGCPDH
SIO_010081: LOC104678039
subclass of: SO_0000673
so part of: LOC104678039
location: join(2877671..2877823,2880854..2880952,2883941..2884024,2887550..2887780,2892379..2892492,2897989..2898098,2900868..2900948,2905945..2906051,2910184..2910234,2910796..2910947,2914800..2914910,2915038..2915149,2915376..2915543,2917207..2917403,2919075..2919191,2919882..2920036,2920503..2920644,2921476..2921578,2923780..2923896,2923986..2924165,2925348..2925490,2929092..2929262,2932005..2932156,2932310..2932472,2932917..2933050,2934157..2934301,2938505..2938624,2939023..2939156,2945683..2945800,2946185..2946325,2948465..2948604,2949557..2949688,2951175..2951328,2956373..2956536,2960613..2960796,2963239..2963379,2966566..2966725,2966831..2966961,2968610..2968703,2969929..2970048,2971426..2971571)
location: region:2877671-2971571:1
so has part: feature:2877671-2877823:1:exon
so has part: feature:2880854-2880952:1:exon
so has part: feature:2883941-2884024:1:exon
so has part: feature:2887550-2887780:1:exon
so has part: feature:2892379-2892492:1:exon
so has part: feature:2897989-2898098:1:exon
so has part: feature:2900868-2900948:1:exon
so has part: feature:2905945-2906051:1:exon
so has part: feature:2910184-2910234:1:exon
so has part: feature:2910796-2910947:1:exon
so has part: feature:2914800-2914910:1:exon
so has part: feature:2915038-2915149:1:exon
so has part: feature:2915376-2915543:1:exon
so has part: feature:2917207-2917403:1:exon
so has part: feature:2919075-2919191:1:exon
so has part: feature:2919882-2920036:1:exon
so has part: feature:2920503-2920644:1:exon
so has part: feature:2921476-2921578:1:exon
so has part: feature:2923780-2923896:1:exon
so has part: feature:2923986-2924165:1:exon
so has part: feature:2925348-2925490:1:exon
so has part: feature:2929092-2929262:1:exon
so has part: feature:2932005-2932156:1:exon
so has part: feature:2932310-2932472:1:exon
so has part: feature:2932917-2933050:1:exon
so has part: feature:2934157-2934301:1:exon
so has part: feature:2938505-2938624:1:exon
so has part: feature:2939023-2939156:1:exon
so has part: feature:2945683-2945800:1:exon
so has part: feature:2946185-2946325:1:exon
so has part: feature:2948465-2948604:1:exon
so has part: feature:2949557-2949688:1:exon
so has part: feature:2951175-2951328:1:exon
so has part: feature:2956373-2956536:1:exon
so has part: feature:2960613-2960796:1:exon
so has part: feature:2963239-2963379:1:exon
so has part: feature:2966566-2966725:1:exon
so has part: feature:2966831-2966961:1:exon
so has part: feature:2968610-2968703:1:exon
so has part: feature:2969929-2970048:1:exon
so has part: feature:2971426-2971571:1:exon

XP_030781946.1
type: Protein
SIO_000068: ncbiprotein

position:2877671:1
position: 2877671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2971571:1
position: 2971571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2877671-2877823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2880854-2880952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883941-2884024:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2887550-2887780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2892379-2892492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2897989-2898098:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2900868-2900948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2905945-2906051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2910184-2910234:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2910796-2910947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2914800-2914910:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2915038-2915149:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2915376-2915543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2917207-2917403:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2919075-2919191:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2919882-2920036:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2920503-2920644:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2921476-2921578:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2923780-2923896:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2923986-2924165:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2925348-2925490:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2929092-2929262:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2932005-2932156:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2932310-2932472:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2932917-2933050:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2934157-2934301:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2938505-2938624:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2939023-2939156:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2945683-2945800:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2946185-2946325:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2948465-2948604:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2949557-2949688:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2951175-2951328:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2956373-2956536:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2960613-2960796:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2963239-2963379:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2966566-2966725:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2966831-2966961:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2968610-2968703:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2969929-2970048:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2971426-2971571:1:exon

LOC104678039
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678039
product: laminin subunit alpha-3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 153 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_010383228.2
SIO_010081: LOC104678039
subclass of: SO_0000673
so part of: LOC104678039
location: join(2889119..2889308,2892379..2892492,2897989..2898098,2900868..2900948,2905945..2906051,2910184..2910234,2910796..2910947,2914800..2914910,2915038..2915149,2915376..2915543,2917207..2917403,2919075..2919191,2919882..2920036,2920503..2920644,2921476..2921578,2923780..2923896,2923986..2924165,2925348..2925490,2929092..2929262,2932005..2932156,2932310..2932472,2932917..2933050,2934157..2934301,2938505..2938624,2939023..2939156,2945683..2945800,2946185..2946325,2948465..2948604,2949557..2949688,2951175..2951328,2956373..2956536,2960613..2960796,2963239..2963379,2966566..2966725,2966831..2966961,2968610..2968703,2969929..2970048,2971426..2971985)
location: region:2889119-2971985:1
so has part: feature:2889119-2889308:1:exon
so has part: feature:2892379-2892492:1:exon
so has part: feature:2897989-2898098:1:exon
so has part: feature:2900868-2900948:1:exon
so has part: feature:2905945-2906051:1:exon
so has part: feature:2910184-2910234:1:exon
so has part: feature:2910796-2910947:1:exon
so has part: feature:2914800-2914910:1:exon
so has part: feature:2915038-2915149:1:exon
so has part: feature:2915376-2915543:1:exon
so has part: feature:2917207-2917403:1:exon
so has part: feature:2919075-2919191:1:exon
so has part: feature:2919882-2920036:1:exon
so has part: feature:2920503-2920644:1:exon
so has part: feature:2921476-2921578:1:exon
so has part: feature:2923780-2923896:1:exon
so has part: feature:2923986-2924165:1:exon
so has part: feature:2925348-2925490:1:exon
so has part: feature:2929092-2929262:1:exon
so has part: feature:2932005-2932156:1:exon
so has part: feature:2932310-2932472:1:exon
so has part: feature:2932917-2933050:1:exon
so has part: feature:2934157-2934301:1:exon
so has part: feature:2938505-2938624:1:exon
so has part: feature:2939023-2939156:1:exon
so has part: feature:2945683-2945800:1:exon
so has part: feature:2946185-2946325:1:exon
so has part: feature:2948465-2948604:1:exon
so has part: feature:2949557-2949688:1:exon
so has part: feature:2951175-2951328:1:exon
so has part: feature:2956373-2956536:1:exon
so has part: feature:2960613-2960796:1:exon
so has part: feature:2963239-2963379:1:exon
so has part: feature:2966566-2966725:1:exon
so has part: feature:2966831-2966961:1:exon
so has part: feature:2968610-2968703:1:exon
so has part: feature:2969929-2970048:1:exon
so has part: feature:2971426-2971985:1:exon

position:2889119:1
position: 2889119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2889119-2889308:1:exon

position:2889308:1
position: 2889308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2892379-2892492:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2897989-2898098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2900868-2900948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2905945-2906051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2910184-2910234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2910796-2910947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2914800-2914910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2915038-2915149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2915376-2915543:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2917207-2917403:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2919075-2919191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2919882-2920036:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2920503-2920644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2921476-2921578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2923780-2923896:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2923986-2924165:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925348-2925490:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929092-2929262:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2932005-2932156:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932310-2932472:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2932917-2933050:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934157-2934301:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2938505-2938624:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2939023-2939156:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2945683-2945800:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2946185-2946325:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2948465-2948604:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2949557-2949688:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2951175-2951328:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2956373-2956536:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2960613-2960796:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2963239-2963379:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2966566-2966725:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2966831-2966961:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2968610-2968703:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2969929-2970048:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2971426-2971985:1:exon

LOC104678039
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678039
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: laminin subunit alpha-3 isoform X2
translation: MPPAVRRSARSMGWLWIFGAALGQCLGYSSQQQRVPFLQPPGQSQLQASYVEFRPSQGCSPGYYRDHKGLYTGRCVPCNCNGHSNRCQDGSGICVNCQHNTAGEHCERCQEGYYGNAVHGSCRACPCPHTNRFATGCVVNGGDVRCSCKAGYTGTQCERCAPGYFGNPQKFGGSCQPCSCNSNGQLGSCDPLTGDCINQEPKDSSPAEECDDCDSCVMTLLNDLATMGEQLRLVKSQLQGLSASAELLEQMRHVETQAKDLRNQLLNYRSAISNHGSKIEGLERELTGLNQEFETLQEKAQVNSRKAQTLYNNVNRAIQSAKELDMKIKTVIRNVHILLKQISGTDGEGNNVPSGDFSREWAEAQRMMRELRNRNFGKHLREAEADKRESQLLLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQEAAARAKQANGLNQENERALGAIQRQVKEINSLQSDFTKYLTSADSSLLQTNIALQLMEKSQKEYEKLAASLNEARQELSDKVRELSRSAGKTSLVEEAEKHAQSLQELAKQLEEIKRNASGDELVRCAVDAATAYENILNAIKAAEDAANRAASASESALQTVIKEDLPRKAKTLSSNSDKLLNEAKMTQKKLKQEVHLALSNLQQTLNIVTVQKEVIATNLTTLRDGLRGIQRGDIDAMISSAKSMVRKANDITDEVLDGLNPIQTDVERIKDTYGSTQTEDFKKALTDADNSVNKLTNKLPDLWRKIESINQQLLPLGNISDNMDRIRELIQQARDAASKVAVPMRFNGKSGVEVRLPNDLEDLKGYTSLSLFLQRPNSRENGGTENMFVMYLGNKDASRDYIGMAVVDGQLTCVYNLGDRETELQVDQILTESETQEAVMDRVKFQRIYQFARLNYTKGATSSKPEIPGVYDMDGRNSNTLLNLDPENVVFYVGGYPPDFKLPSRLRFPPYKGCIELDDLNENVLSLYNFKKTFNLNTTEVEPCRRRKEESDKNYFEGTGYARVPTQPHASIPTFGQTIQTTVDRGLLFFTENGDRFISLNIEDGKLMVRYKLNSEPPKERGVGDAINNGRDHSIQIKIGKVQKRMWINVDFQNTIIDGEVFDFSTYYLGGIPIAIRERFNISTPAFRGCMKNLKKTSGVVRLNDTVGVTKKCSEDWKLVRSASFSRGGQLSFTNLGSPLTDHLQASFGFQTFQPSGVLLSLQTRTSTLQVTLEDGHIELSTRDSDGPIFKSPQTYMDGLLHYVSVISDNSGLRLLIDDQPLRNGQRPKRISSSQQSLRLGGSNFEGCISNVFVQRLSLSPEVLDLASNSLKRDVSLGGCSLNKPPFLMLLQGSTRFNKAKTSRINQLLQDTPVASPRSMKVWQDACSPLPRTQANHGALQFGDIPTSHLLFKLPQELLKPRSQFAVDMQTTSSRGLVFHTGTKNSFMALYLSKGRLVFALGTDGKKLRIKSKEKCNDGKWHTVVFGHDGEKGRLVVDGLRAREGSLPGNSTVSIRGPVYLGSPPSGKPKSLPTNSFVGCLKNFQLDSKPLDTPSSSFGVSSCLGGPLEKGIYFSEEGGHVILAHSVLLGPEFKLVFSIRPRSLTGILIHIGSQPGKHLCVYLEAGKVTASMDSGAGGTSTSVTPKQSLCDGQWHSVAVTIKQHILHLELDTDSSYTAGQIPFPPASTQEPLHLGGAPANLTTLRIPVWKSFFGCLRNIFVNHIPVPVTEALEVQGPVSLNGCPDH
SIO_010081: LOC104678039
subclass of: SO_0000673
so part of: LOC104678039
location: join(2889138..2889308,2892379..2892492,2897989..2898098,2900868..2900948,2905945..2906051,2910184..2910234,2910796..2910947,2914800..2914910,2915038..2915149,2915376..2915543,2917207..2917403,2919075..2919191,2919882..2920036,2920503..2920644,2921476..2921578,2923780..2923896,2923986..2924165,2925348..2925490,2929092..2929262,2932005..2932156,2932310..2932472,2932917..2933050,2934157..2934301,2938505..2938624,2939023..2939156,2945683..2945800,2946185..2946325,2948465..2948604,2949557..2949688,2951175..2951328,2956373..2956536,2960613..2960796,2963239..2963379,2966566..2966725,2966831..2966961,2968610..2968703,2969929..2970048,2971426..2971571)
location: region:2889138-2971571:1
so has part: feature:2889138-2889308:1:exon
so has part: feature:2892379-2892492:1:exon
so has part: feature:2897989-2898098:1:exon
so has part: feature:2900868-2900948:1:exon
so has part: feature:2905945-2906051:1:exon
so has part: feature:2910184-2910234:1:exon
so has part: feature:2910796-2910947:1:exon
so has part: feature:2914800-2914910:1:exon
so has part: feature:2915038-2915149:1:exon
so has part: feature:2915376-2915543:1:exon
so has part: feature:2917207-2917403:1:exon
so has part: feature:2919075-2919191:1:exon
so has part: feature:2919882-2920036:1:exon
so has part: feature:2920503-2920644:1:exon
so has part: feature:2921476-2921578:1:exon
so has part: feature:2923780-2923896:1:exon
so has part: feature:2923986-2924165:1:exon
so has part: feature:2925348-2925490:1:exon
so has part: feature:2929092-2929262:1:exon
so has part: feature:2932005-2932156:1:exon
so has part: feature:2932310-2932472:1:exon
so has part: feature:2932917-2933050:1:exon
so has part: feature:2934157-2934301:1:exon
so has part: feature:2938505-2938624:1:exon
so has part: feature:2939023-2939156:1:exon
so has part: feature:2945683-2945800:1:exon
so has part: feature:2946185-2946325:1:exon
so has part: feature:2948465-2948604:1:exon
so has part: feature:2949557-2949688:1:exon
so has part: feature:2951175-2951328:1:exon
so has part: feature:2956373-2956536:1:exon
so has part: feature:2960613-2960796:1:exon
so has part: feature:2963239-2963379:1:exon
so has part: feature:2966566-2966725:1:exon
so has part: feature:2966831-2966961:1:exon
so has part: feature:2968610-2968703:1:exon
so has part: feature:2969929-2970048:1:exon
so has part: feature:2971426-2971571:1:exon

XP_010381530.2
type: Protein
SIO_000068: ncbiprotein

position:2889138:1
position: 2889138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2889138-2889308:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2892379-2892492:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2897989-2898098:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2900868-2900948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2905945-2906051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2910184-2910234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2910796-2910947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2914800-2914910:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2915038-2915149:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2915376-2915543:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2917207-2917403:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2919075-2919191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2919882-2920036:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2920503-2920644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2921476-2921578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2923780-2923896:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2923986-2924165:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2925348-2925490:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2929092-2929262:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2932005-2932156:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2932310-2932472:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2932917-2933050:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2934157-2934301:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2938505-2938624:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2939023-2939156:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2945683-2945800:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2946185-2946325:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2948465-2948604:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2949557-2949688:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2951175-2951328:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2956373-2956536:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2960613-2960796:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2963239-2963379:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2966566-2966725:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2966831-2966961:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2968610-2968703:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2969929-2970048:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2971426-2971571:1:exon

LOC104678036
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3010845..3020684)
location: region:3010845-3020684:-1
so has part: feature:3010845-3020684:-1:exon
subclass of: SO_0000011

104678036
type: Gene
SIO_000068: ncbigene

position:3010845:-1
position: 3010845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3020684:-1
position: 3020684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3010845-3020684:-1:exon

LOC104678036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC104678036
product: uncharacterized LOC104678036, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004055670.1
SIO_010081: LOC104678036
subclass of: SO_0000673
so part of: LOC104678036
location: complement(join(3010845..3011530,3016910..3017006,3017769..3017854,3018072..3018169,3020478..3020684))
location: region:3010845-3020684:-1
so has part: feature:3020478-3020684:-1:exon
so has part: feature:3018072-3018169:-1:exon
so has part: feature:3017769-3017854:-1:exon
so has part: feature:3016910-3017006:-1:exon
so has part: feature:3010845-3011530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3020478-3020684:-1:exon

position:3020478:-1
position: 3020478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3018072-3018169:-1:exon

position:3018072:-1
position: 3018072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3018169:-1
position: 3018169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3017769-3017854:-1:exon

position:3017769:-1
position: 3017769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3017854:-1
position: 3017854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3016910-3017006:-1:exon

position:3016910:-1
position: 3016910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3017006:-1
position: 3017006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3010845-3011530:-1:exon

position:3011530:-1
position: 3011530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104678036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC104678036
product: uncharacterized LOC104678036, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055668.1
SIO_010081: LOC104678036
subclass of: SO_0000673
so part of: LOC104678036
location: complement(join(3010845..3011114,3011328..3011530,3016027..3016227,3016910..3017006,3017769..3017854,3018072..3018169,3020478..3020684))
location: region:3010845-3020684:-1
so has part: feature:3020478-3020684:-1:exon
so has part: feature:3018072-3018169:-1:exon
so has part: feature:3017769-3017854:-1:exon
so has part: feature:3016910-3017006:-1:exon
so has part: feature:3016027-3016227:-1:exon
so has part: feature:3011328-3011530:-1:exon
so has part: feature:3010845-3011114:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3020478-3020684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3018072-3018169:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3017769-3017854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3016910-3017006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3016027-3016227:-1:exon

position:3016027:-1
position: 3016027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3016227:-1
position: 3016227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3011328-3011530:-1:exon

position:3011328:-1
position: 3011328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3010845-3011114:-1:exon

position:3011114:-1
position: 3011114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104678036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC104678036
product: uncharacterized LOC104678036, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055667.1
SIO_010081: LOC104678036
subclass of: SO_0000673
so part of: LOC104678036
location: complement(join(3010845..3011530,3016027..3016227,3016910..3017006,3017769..3017854,3018072..3018169,3020478..3020684))
location: region:3010845-3020684:-1
so has part: feature:3020478-3020684:-1:exon
so has part: feature:3018072-3018169:-1:exon
so has part: feature:3017769-3017854:-1:exon
so has part: feature:3016910-3017006:-1:exon
so has part: feature:3016027-3016227:-1:exon
so has part: feature:3010845-3011530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3020478-3020684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3018072-3018169:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3017769-3017854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3016910-3017006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3016027-3016227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3010845-3011530:-1:exon

LOC104678036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC104678036
product: uncharacterized LOC104678036, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004055669.1
SIO_010081: LOC104678036
subclass of: SO_0000673
so part of: LOC104678036
location: complement(join(3010845..3011530,3016027..3016227,3016910..3017082,3017769..3017854,3018072..3018169,3020478..3020684))
location: region:3010845-3020684:-1
so has part: feature:3020478-3020684:-1:exon
so has part: feature:3018072-3018169:-1:exon
so has part: feature:3017769-3017854:-1:exon
so has part: feature:3016910-3017082:-1:exon
so has part: feature:3016027-3016227:-1:exon
so has part: feature:3010845-3011530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3020478-3020684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3018072-3018169:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3017769-3017854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3016910-3017082:-1:exon

position:3017082:-1
position: 3017082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3016027-3016227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3010845-3011530:-1:exon

TTC39C
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: TTC39C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3030468..3151278
location: region:3030468-3151278:1
so has part: feature:3030468-3151278:1:exon
subclass of: SO_0000010

104678037
type: Gene
SIO_000068: ncbigene

position:3030468:1
position: 3030468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3151278:1
position: 3151278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3030468-3151278:1:exon

TTC39C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TTC39C
product: tetratricopeptide repeat domain 39C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 66 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010383223.2
SIO_010081: TTC39C
subclass of: SO_0000673
so part of: TTC39C
location: join(3030468..3031249,3080914..3080962,3082804..3082932,3086246..3086360,3097885..3098239,3100028..3100196,3132334..3132427,3135835..3135942,3141508..3141617,3143084..3143207,3147139..3147236,3148556..3148660,3150123..3150161,3150726..3151278)
location: region:3030468-3151278:1
so has part: feature:3030468-3031249:1:exon
so has part: feature:3080914-3080962:1:exon
so has part: feature:3082804-3082932:1:exon
so has part: feature:3086246-3086360:1:exon
so has part: feature:3097885-3098239:1:exon
so has part: feature:3100028-3100196:1:exon
so has part: feature:3132334-3132427:1:exon
so has part: feature:3135835-3135942:1:exon
so has part: feature:3141508-3141617:1:exon
so has part: feature:3143084-3143207:1:exon
so has part: feature:3147139-3147236:1:exon
so has part: feature:3148556-3148660:1:exon
so has part: feature:3150123-3150161:1:exon
so has part: feature:3150726-3151278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3030468-3031249:1:exon

position:3031249:1
position: 3031249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3080914-3080962:1:exon

position:3080914:1
position: 3080914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3080962:1
position: 3080962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3082804-3082932:1:exon

position:3082804:1
position: 3082804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3082932:1
position: 3082932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3086246-3086360:1:exon

position:3086246:1
position: 3086246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3086360:1
position: 3086360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3097885-3098239:1:exon

position:3097885:1
position: 3097885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3098239:1
position: 3098239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3100028-3100196:1:exon

position:3100028:1
position: 3100028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3100196:1
position: 3100196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3132334-3132427:1:exon

position:3132334:1
position: 3132334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3132427:1
position: 3132427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3135835-3135942:1:exon

position:3135835:1
position: 3135835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3135942:1
position: 3135942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3141508-3141617:1:exon

position:3141508:1
position: 3141508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141617:1
position: 3141617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3143084-3143207:1:exon

position:3143084:1
position: 3143084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143207:1
position: 3143207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3147139-3147236:1:exon

position:3147139:1
position: 3147139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3147236:1
position: 3147236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3148556-3148660:1:exon

position:3148556:1
position: 3148556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148660:1
position: 3148660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3150123-3150161:1:exon

position:3150123:1
position: 3150123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150161:1
position: 3150161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3150726-3151278:1:exon

position:3150726:1
position: 3150726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC39C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TTC39C
product: tetratricopeptide repeat domain 39C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010383225.2
SIO_010081: TTC39C
subclass of: SO_0000673
so part of: TTC39C
location: join(3030468..3031249,3036078..3036513)
location: region:3030468-3036513:1
so has part: feature:3030468-3031249:1:exon
so has part: feature:3036078-3036513:1:exon

position:3036513:1
position: 3036513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3030468-3031249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3036078-3036513:1:exon

position:3036078:1
position: 3036078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC39C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TTC39C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 39C isoform X1
translation: MAGSEQQRPRRRDDRDSDAAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRNHSPLMSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEAGVIETIKNKIKKNVDVRKSAPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGWILRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGAVSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQGLSSLMYASESKDMKAPLATLALLWYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRKNNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPETVGRGRTLLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ
SIO_010081: TTC39C
subclass of: SO_0000673
so part of: TTC39C
location: join(3031083..3031249,3080914..3080962,3082804..3082932,3086246..3086360,3097885..3098239,3100028..3100196,3132334..3132427,3135835..3135942,3141508..3141617,3143084..3143207,3147139..3147236,3148556..3148660,3150123..3150161,3150726..3150815)
location: region:3031083-3150815:1
so has part: feature:3031083-3031249:1:exon
so has part: feature:3080914-3080962:1:exon
so has part: feature:3082804-3082932:1:exon
so has part: feature:3086246-3086360:1:exon
so has part: feature:3097885-3098239:1:exon
so has part: feature:3100028-3100196:1:exon
so has part: feature:3132334-3132427:1:exon
so has part: feature:3135835-3135942:1:exon
so has part: feature:3141508-3141617:1:exon
so has part: feature:3143084-3143207:1:exon
so has part: feature:3147139-3147236:1:exon
so has part: feature:3148556-3148660:1:exon
so has part: feature:3150123-3150161:1:exon
so has part: feature:3150726-3150815:1:exon

XP_010381525.1
type: Protein
SIO_000068: ncbiprotein

position:3031083:1
position: 3031083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3150815:1
position: 3150815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3031083-3031249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3080914-3080962:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3082804-3082932:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3086246-3086360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3097885-3098239:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3100028-3100196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3132334-3132427:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3135835-3135942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3141508-3141617:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3143084-3143207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3147139-3147236:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3148556-3148660:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3150123-3150161:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3150726-3150815:1:exon

TTC39C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TTC39C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 39C isoform X3
translation: MAGSEQQRPRRRDDRDSDAAAAAAAPLQDAELALAGINMLLNNGFRESDQLFKQYRKSFLTSEKTLVLPGKTQRHL
SIO_010081: TTC39C
subclass of: SO_0000673
so part of: TTC39C
location: join(3031083..3031249,3036078..3036141)
location: region:3031083-3036141:1
so has part: feature:3031083-3031249:1:exon
so has part: feature:3036078-3036141:1:exon

XP_010381527.1
type: Protein
SIO_000068: ncbiprotein

position:3036141:1
position: 3036141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3031083-3031249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3036078-3036141:1:exon

LOC104678038
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3059844..3061406
location: region:3059844-3061406:1
so has part: feature:3059844-3061406:1:exon
subclass of: SO_0000011

104678038
type: Gene
SIO_000068: ncbigene

position:3059844:1
position: 3059844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3061406:1
position: 3061406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3059844-3061406:1:exon

LOC104678038
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC104678038
product: uncharacterized LOC104678038
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_750124.2
SIO_010081: LOC104678038
subclass of: SO_0000673
so part of: LOC104678038
location: join(3059844..3060418,3060452..3061406)
location: region:3059844-3061406:1
so has part: feature:3059844-3060418:1:exon
so has part: feature:3060452-3061406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3059844-3060418:1:exon

position:3060418:1
position: 3060418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3060452-3061406:1:exon

position:3060452:1
position: 3060452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC39C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: TTC39C
product: tetratricopeptide repeat domain 39C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_030925857.1
SIO_010081: TTC39C
subclass of: SO_0000673
so part of: TTC39C
location: join(3098066..3098211,3100028..3100196,3132334..3132427,3135835..3135942,3141508..3141617,3143084..3143207,3147139..3147236,3148556..3148660,3150123..3150161,3150726..3151278)
location: region:3098066-3151278:1
so has part: feature:3098066-3098211:1:exon
so has part: feature:3100028-3100196:1:exon
so has part: feature:3132334-3132427:1:exon
so has part: feature:3135835-3135942:1:exon
so has part: feature:3141508-3141617:1:exon
so has part: feature:3143084-3143207:1:exon
so has part: feature:3147139-3147236:1:exon
so has part: feature:3148556-3148660:1:exon
so has part: feature:3150123-3150161:1:exon
so has part: feature:3150726-3151278:1:exon

position:3098066:1
position: 3098066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3098066-3098211:1:exon

position:3098211:1
position: 3098211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3100028-3100196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3132334-3132427:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3135835-3135942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141508-3141617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3143084-3143207:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3147139-3147236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3148556-3148660:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3150123-3150161:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3150726-3151278:1:exon

TTC39C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: TTC39C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 39C isoform X2
translation: MFFKGRIQRLECQINSALTSFHTALELAVDQREIQHVCLYEIGWCSMIELNFKDAFDSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAQIVFKEVQKLFKRKNNQIEQFSVKKAERFRKQTPTKALCVLASIEVLYLWKALPNCSFPNLQRMSQACHEVDDSSVVGLKYLLLGAIHKCLGNSEDAVQYFQRAVKDELCRQNNLYVQPYACYELGCLLLDKPETVGRGRTLLLQAKEDFSGYDFENRLHVRIHAALASLRELVPQ
SIO_010081: TTC39C
subclass of: SO_0000673
so part of: TTC39C
location: join(3100164..3100196,3132334..3132427,3135835..3135942,3141508..3141617,3143084..3143207,3147139..3147236,3148556..3148660,3150123..3150161,3150726..3150815)
location: region:3100164-3150815:1
so has part: feature:3100164-3100196:1:exon
so has part: feature:3132334-3132427:1:exon
so has part: feature:3135835-3135942:1:exon
so has part: feature:3141508-3141617:1:exon
so has part: feature:3143084-3143207:1:exon
so has part: feature:3147139-3147236:1:exon
so has part: feature:3148556-3148660:1:exon
so has part: feature:3150123-3150161:1:exon
so has part: feature:3150726-3150815:1:exon

XP_030781717.1
type: Protein
SIO_000068: ncbiprotein

position:3100164:1
position: 3100164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3100164-3100196:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3132334-3132427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3135835-3135942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3141508-3141617:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3143084-3143207:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3147139-3147236:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3148556-3148660:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3150123-3150161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3150726-3150815:1:exon

LOC115895602
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895602
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3141832..3141947)
location: region:3141832-3141947:-1
so has part: feature:3141832-3141947:-1:exon
subclass of: SO_0000623

115895602
type: Gene
SIO_000068: ncbigene

position:3141832:-1
position: 3141832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3141947:-1
position: 3141947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3141832-3141947:-1:exon

LOC115895602
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895602
product: U5 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00020
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055782.1
SIO_010081: LOC115895602
subclass of: SO_0000673
so part of: LOC115895602
location: complement(3141832..3141947)
location: region:3141832-3141947:-1
so has part: feature:3141832-3141947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3141832-3141947:-1:exon

CABYR
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: CABYR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3157170..3178232
location: region:3157170-3178232:1
so has part: feature:3157170-3178232:1:exon
subclass of: SO_0000010

104678035
type: Gene
SIO_000068: ncbigene

position:3157170:1
position: 3157170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3178232:1
position: 3178232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3157170-3178232:1:exon

CABYR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CABYR
product: calcium binding tyrosine phosphorylation regulated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 142 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_030925865.1
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3157170..3157717,3161963..3162131,3162232..3162285,3172787..3178223)
location: region:3157170-3178223:1
so has part: feature:3157170-3157717:1:exon
so has part: feature:3161963-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3178223:1:exon

position:3178223:1
position: 3178223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3157170-3157717:1:exon

position:3157717:1
position: 3157717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3161963-3162131:1:exon

position:3161963:1
position: 3161963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3162131:1
position: 3162131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3162232-3162285:1:exon

position:3162232:1
position: 3162232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3162285:1
position: 3162285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3172787-3178223:1:exon

position:3172787:1
position: 3172787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CABYR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CABYR
product: calcium binding tyrosine phosphorylation regulated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 139 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010383219.2
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3157170..3157717,3161963..3162131,3162232..3162285,3172787..3174067,3176145..3176742)
location: region:3157170-3176742:1
so has part: feature:3157170-3157717:1:exon
so has part: feature:3161963-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3174067:1:exon
so has part: feature:3176145-3176742:1:exon

position:3176742:1
position: 3176742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3157170-3157717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3161963-3162131:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3172787-3174067:1:exon

position:3174067:1
position: 3174067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3176145-3176742:1:exon

position:3176145:1
position: 3176145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CABYR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CABYR
product: calcium binding tyrosine phosphorylation regulated, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 117 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030925867.1
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3157174..3157717,3161963..3162131,3162232..3162285,3172787..3173128,3176619..3178223)
location: region:3157174-3178223:1
so has part: feature:3157174-3157717:1:exon
so has part: feature:3161963-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3173128:1:exon
so has part: feature:3176619-3178223:1:exon

position:3157174:1
position: 3157174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3157174-3157717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3161963-3162131:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3172787-3173128:1:exon

position:3173128:1
position: 3173128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3176619-3178223:1:exon

position:3176619:1
position: 3176619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CABYR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CABYR
product: calcium binding tyrosine phosphorylation regulated, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 117 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010383221.2
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3157175..3157717,3161963..3162131,3162232..3162285,3172787..3173128,3176619..3176742,3178148..3178232)
location: region:3157175-3178232:1
so has part: feature:3157175-3157717:1:exon
so has part: feature:3161963-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3173128:1:exon
so has part: feature:3176619-3176742:1:exon
so has part: feature:3178148-3178232:1:exon

position:3157175:1
position: 3157175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3157175-3157717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3161963-3162131:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3172787-3173128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3176619-3176742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3178148-3178232:1:exon

position:3178148:1
position: 3178148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CABYR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CABYR
product: calcium binding tyrosine phosphorylation regulated, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 167 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010383220.2
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3157180..3157717,3161963..3162131,3162232..3162285,3172787..3173128,3176145..3176742,3178148..3178232)
location: region:3157180-3178232:1
so has part: feature:3157180-3157717:1:exon
so has part: feature:3161963-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3173128:1:exon
so has part: feature:3176145-3176742:1:exon
so has part: feature:3178148-3178232:1:exon

position:3157180:1
position: 3157180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3157180-3157717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3161963-3162131:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3172787-3173128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3176145-3176742:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3178148-3178232:1:exon

CABYR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: CABYR
product: calcium binding tyrosine phosphorylation regulated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 135 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_030925866.1
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3157180..3157717,3161963..3162131,3162232..3162285,3172787..3173128,3176145..3178223)
location: region:3157180-3178223:1
so has part: feature:3157180-3157717:1:exon
so has part: feature:3161963-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3173128:1:exon
so has part: feature:3176145-3178223:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3157180-3157717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3161963-3162131:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3172787-3173128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3176145-3178223:1:exon

LOC115895481
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895481
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3159780..3173144)
location: region:3159780-3173144:-1
so has part: feature:3159780-3173144:-1:exon
subclass of: SO_0000011

115895481
type: Gene
SIO_000068: ncbigene

position:3159780:-1
position: 3159780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3173144:-1
position: 3173144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3159780-3173144:-1:exon

LOC115895481
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: lncRNA
gene: LOC115895481
product: uncharacterized LOC115895481
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004055673.1
SIO_010081: LOC115895481
subclass of: SO_0000673
so part of: LOC115895481
location: complement(join(3159780..3160023,3164219..3164335,3173075..3173144))
location: region:3159780-3173144:-1
so has part: feature:3173075-3173144:-1:exon
so has part: feature:3164219-3164335:-1:exon
so has part: feature:3159780-3160023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3173075-3173144:-1:exon

position:3173075:-1
position: 3173075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3164219-3164335:-1:exon

position:3164219:-1
position: 3164219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3164335:-1
position: 3164335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3159780-3160023:-1:exon

position:3160023:-1
position: 3160023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CABYR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CABYR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X3
translation: MISSKPRLVVPYGLKTLLEGISRAVLKINPSDINQFAAAYFQELTMYRGNTTVDIKDLVKQFHQIKVEKWSEGTTPQKKLECVKEPEKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAEPGAEQTEAVGDSSSKPATPKATTPPSSPPPTAVSPEFAYVPADPAQLAAQMLAMAASERGQPPPYSNMWTLYCLTDKNQQGHPSPPPAPGPFPQATLYLSNPQDPQFLQHPPKVTFPTYVMGDTMKTSAPPFILVGSNVQEAQGWKPLPGHAVVSQSDVLRYVAMQVPIAVPADEKFQKQTLSPQNANPPSGQDVPRPKSPVFLSVAFPVEDVAKKSSGSGDKCAPFGSYGIAGEVTVTTAHKVRKAATEN
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3161987..3162131,3162232..3162285,3172787..3173128,3176145..3176742,3178148)
location: region:3161987-3178148:1
so has part: feature:3161987-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3173128:1:exon
so has part: feature:3176145-3176742:1:exon
so has part: feature:3178148-3178148:1:exon

XP_010381522.1
type: Protein
SIO_000068: ncbiprotein

position:3161987:1
position: 3161987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3161987-3162131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172787-3173128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3176145-3176742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3178148-3178148:1:exon

CABYR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CABYR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X5
translation: MISSKPRLVVPYGLKTLLEGISRAVLKINPSDINQFAAAYFQELTMYRGNTTVDIKDLVKQFHQIKVEKWSEGTTPQKKLECVKEPEKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAEPGAEQTEAVGDSSSKPATPKATTPPSSPPPTAVSPEFAYVPADPAQLAAQMLEDVAKKSSGSGDKCAPFGSYGIAGEVTVTTAHKVRKAATEN
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3161987..3162131,3162232..3162285,3172787..3173128,3176619..3176742,3178148)
location: region:3161987-3178148:1
so has part: feature:3161987-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3173128:1:exon
so has part: feature:3176619-3176742:1:exon
so has part: feature:3178148-3178148:1:exon

XP_010381523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3161987-3162131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172787-3173128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3176619-3176742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3178148-3178148:1:exon

CABYR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CABYR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X2
translation: MISSKPRLVVPYGLKTLLEGISRAVLKINPSDINQFAAAYFQELTMYRGNTTVDIKDLVKQFHQIKVEKWSEGTTPQKKLECVKEPEKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAEPGAEQTEAVGDSSSKPATPKATTPPSSPPPTAVSPEFAYVPADPAQLAAQMLAMAASERGQPPPYSNMWTLYCLTDKNQQGHPSPPPAPGPFPQATLYLSNPQDPQFLQHPPKVTFPTYVMGDTMKTSAPPFILVGSNVQEAQGWKPLPGHAVVSQSDVLRYVAMQVPIAVPADEKFQKQTLSPQNANPPSGQDVPRPKSPVFLSVAFPVEDVAKKSSGSGDKCAPFGSYGIAGEVTVTTAHKVRKAATENW
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3161987..3162131,3162232..3162285,3172787..3173128,3176145..3176746)
location: region:3161987-3176746:1
so has part: feature:3161987-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3173128:1:exon
so has part: feature:3176145-3176746:1:exon

XP_030781726.1
type: Protein
SIO_000068: ncbiprotein

position:3176746:1
position: 3176746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3161987-3162131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172787-3173128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3176145-3176746:1:exon

CABYR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CABYR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X4
translation: MISSKPRLVVPYGLKTLLEGISRAVLKINPSDINQFAAAYFQELTMYRGNTTVDIKDLVKQFHQIKVEKWSEGTTPQKKLECVKEPEKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAEPGAEQTEAVGDSSSKPATPKATTPPSSPPPTAVSPEFAYVPADPAQLAAQMLEDVAKKSSGSGDKCAPFGSYGIAGEVTVTTAHKVRKAATENW
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3161987..3162131,3162232..3162285,3172787..3173128,3176619..3176746)
location: region:3161987-3176746:1
so has part: feature:3161987-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3173128:1:exon
so has part: feature:3176619-3176746:1:exon

XP_030781727.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3161987-3162131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172787-3173128:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3176619-3176746:1:exon

CABYR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CABYR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X1
translation: MISSKPRLVVPYGLKTLLEGISRAVLKINPSDINQFAAAYFQELTMYRGNTTVDIKDLVKQFHQIKVEKWSEGTTPQKKLECVKEPEKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAEPGAEQTEAVGDSSSKPATPKATTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEVAEDVMVAAPLVCSGKVLEVQVVSQTSVHVDLGSQPKENEAEQSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDVPVIEGVVYIEQLPEQIVTPFTDQVACLKENEQSPPVSPKSVVEKTTSGISKKSVESVELAQLEENAKYSSVYMEAEAASLLSDTSLKGQPEVSAQLLDAEGAIKIGSEKSLHLEVGITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLTAPEIEPEGEATAE
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3161987..3162131,3162232..3162285,3172787..3174051)
location: region:3161987-3174051:1
so has part: feature:3161987-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3174051:1:exon

XP_030781725.1
type: Protein
SIO_000068: ncbiprotein

position:3174051:1
position: 3174051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3161987-3162131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172787-3174051:1:exon

CABYR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: CABYR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding tyrosine phosphorylation-regulated protein isoform X1
translation: MISSKPRLVVPYGLKTLLEGISRAVLKINPSDINQFAAAYFQELTMYRGNTTVDIKDLVKQFHQIKVEKWSEGTTPQKKLECVKEPEKTSVESKVPTQMEKSTDTDEDNVTRTEYSDKTTQFPSVYAEPGAEQTEAVGDSSSKPATPKATTPPSSPPPTAVSPEFAYVPADPAQLAAQMLGKVSSIHSDQSDVLMVDVATSMPVVIKEVPSSEVAEDVMVAAPLVCSGKVLEVQVVSQTSVHVDLGSQPKENEAEQSTASSVPLQDEQEPPAYDQAPEVTLQADIEVMSTVHISSVYNDVPVIEGVVYIEQLPEQIVTPFTDQVACLKENEQSPPVSPKSVVEKTTSGISKKSVESVELAQLEENAKYSSVYMEAEAASLLSDTSLKGQPEVSAQLLDAEGAIKIGSEKSLHLEVGITSIVSDNTGQEESGENSVPQEMEGKPVLSGEAAEAVHSGTSVKSSSGPFPPAPEGLTAPEIEPEGEATAE
SIO_010081: CABYR
subclass of: SO_0000673
so part of: CABYR
location: join(3161987..3162131,3162232..3162285,3172787..3174051)
location: region:3161987-3174051:1
so has part: feature:3161987-3162131:1:exon
so has part: feature:3162232-3162285:1:exon
so has part: feature:3172787-3174051:1:exon

XP_010381521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3161987-3162131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3162232-3162285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172787-3174051:1:exon

OSBPL1A
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3178660..3412995)
location: region:3178660-3412995:-1
so has part: feature:3178660-3412995:-1:exon
subclass of: SO_0000010

104678034
type: Gene
SIO_000068: ncbigene

position:3178660:-1
position: 3178660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3412995:-1
position: 3412995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3178660-3412995:-1:exon

OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 216 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010383216.2
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3178660..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382431,3383787..3383872,3391999..3392121,3412781..3412995))
location: region:3178660-3412995:-1
so has part: feature:3412781-3412995:-1:exon
so has part: feature:3391999-3392121:-1:exon
so has part: feature:3383787-3383872:-1:exon
so has part: feature:3382357-3382431:-1:exon
so has part: feature:3358055-3358166:-1:exon
so has part: feature:3347900-3347985:-1:exon
so has part: feature:3346605-3346749:-1:exon
so has part: feature:3334095-3334153:-1:exon
so has part: feature:3333949-3333993:-1:exon
so has part: feature:3332676-3332749:-1:exon
so has part: feature:3332498-3332561:-1:exon
so has part: feature:3329995-3330093:-1:exon
so has part: feature:3326752-3326874:-1:exon
so has part: feature:3318750-3318831:-1:exon
so has part: feature:3300478-3300584:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3178660-3179889:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3412781-3412995:-1:exon

position:3412781:-1
position: 3412781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3391999-3392121:-1:exon

position:3391999:-1
position: 3391999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3392121:-1
position: 3392121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3383787-3383872:-1:exon

position:3383787:-1
position: 3383787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3383872:-1
position: 3383872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3382357-3382431:-1:exon

position:3382357:-1
position: 3382357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3382431:-1
position: 3382431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3358055-3358166:-1:exon

position:3358055:-1
position: 3358055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3358166:-1
position: 3358166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3347900-3347985:-1:exon

position:3347900:-1
position: 3347900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3347985:-1
position: 3347985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3346605-3346749:-1:exon

position:3346605:-1
position: 3346605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3346749:-1
position: 3346749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3334095-3334153:-1:exon

position:3334095:-1
position: 3334095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3334153:-1
position: 3334153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3333949-3333993:-1:exon

position:3333949:-1
position: 3333949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3333993:-1
position: 3333993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3332676-3332749:-1:exon

position:3332676:-1
position: 3332676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3332749:-1
position: 3332749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3332498-3332561:-1:exon

position:3332498:-1
position: 3332498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3332561:-1
position: 3332561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3329995-3330093:-1:exon

position:3329995:-1
position: 3329995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330093:-1
position: 3330093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3326752-3326874:-1:exon

position:3326752:-1
position: 3326752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3326874:-1
position: 3326874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3318750-3318831:-1:exon

position:3318750:-1
position: 3318750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3318831:-1
position: 3318831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3300478-3300584:-1:exon

position:3300478:-1
position: 3300478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3300584:-1
position: 3300584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3257908-3258070:-1:exon

position:3257908:-1
position: 3257908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258070:-1
position: 3258070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3243186-3243342:-1:exon

position:3243186:-1
position: 3243186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3243342:-1
position: 3243342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3213649-3213724:-1:exon

position:3213649:-1
position: 3213649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213724:-1
position: 3213724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3198067-3198201:-1:exon

position:3198067:-1
position: 3198067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3198201:-1
position: 3198201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3196989-3197086:-1:exon

position:3196989:-1
position: 3196989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3197086:-1
position: 3197086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3195157-3195339:-1:exon

position:3195157:-1
position: 3195157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3195339:-1
position: 3195339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3189469-3189576:-1:exon

position:3189469:-1
position: 3189469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3189576:-1
position: 3189576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3188485-3188574:-1:exon

position:3188485:-1
position: 3188485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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position:3179889:-1
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OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 206 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_010383217.2
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3178660..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382431,3383787..3383872,3391999..3392121,3412699..3412829))
location: region:3178660-3412829:-1
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SIO_000628: feature:3178660-3179889:-1:exon

OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 206 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_030925858.1
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
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location: region:3178660-3412766:-1
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position:3412766:-1
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SIO_000300: 28
SIO_000628: feature:3178660-3179889:-1:exon

OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 206 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_030925859.1
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3178660..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382431,3383867..3383872,3391999..3392108))
location: region:3178660-3392108:-1
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position:3392108:-1
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urn:…
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OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 206 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_030925860.1
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
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urn:…
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SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3189469-3189576:-1:exon

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SIO_000300: 22
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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urn:…
SIO_000300: 27
SIO_000628: feature:3178660-3179889:-1:exon

OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 206 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030925861.1
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3178660..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382448,3383787..3383866))
location: region:3178660-3383866:-1
so has part: feature:3383787-3383866:-1:exon
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so has part: feature:3181666-3181756:-1:exon
so has part: feature:3178660-3179889:-1:exon

position:3383866:-1
position: 3383866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3383787-3383866:-1:exon

urn:…
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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 20
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SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3178660-3179889:-1:exon

OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 205 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030925862.1
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3178660..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3349599..3350199))
location: region:3178660-3350199:-1
so has part: feature:3349599-3350199:-1:exon
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so has part: feature:3181666-3181756:-1:exon
so has part: feature:3178660-3179889:-1:exon

position:3350199:-1
position: 3350199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3349599-3350199:-1:exon

position:3349599:-1
position: 3349599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3347900-3347985:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3178660-3179889:-1:exon

OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 227 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010383218.2
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3178660..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3291241..3291850))
location: region:3178660-3291850:-1
so has part: feature:3291241-3291850:-1:exon
so has part: feature:3257908-3258070:-1:exon
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so has part: feature:3181666-3181756:-1:exon
so has part: feature:3178660-3179889:-1:exon

position:3291850:-1
position: 3291850
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type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3291241-3291850:-1:exon

position:3291241:-1
position: 3291241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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SIO_000628: feature:3183939-3184055:-1:exon

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SIO_000300: 12
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3178660-3179889:-1:exon

OSBPL1A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 164 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004055672.1
SIO_010081: OSBPL1A
so part of: OSBPL1A
location: complement(join(3178667..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187342..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382431,3383787..3383872,3391999..3392121,3412781..3412914))
location: region:3178667-3412914:-1
so has part: feature:3412781-3412914:-1:exon
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position:3178667:-1
position: 3178667
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type: ReverseStrandPosition
type: ExactPosition

position:3412914:-1
position: 3412914
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type: ReverseStrandPosition
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urn:…
SIO_000300: 1
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SIO_000300: 23
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urn:…
SIO_000300: 24
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position:3187342:-1
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urn:…
SIO_000300: 25
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OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 104 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030925864.1
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179698..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3318750..3318831,3326752..3326874))
location: region:3179698-3326874:-1
so has part: feature:3326752-3326874:-1:exon
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so has part: feature:3179698-3179889:-1:exon

position:3179698:-1
position: 3179698
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:3326752-3326874:-1:exon

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SIO_000300: 6
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3179698-3179889:-1:exon

OSBPL1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: OSBPL1A
product: oxysterol binding protein like 1A, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 105 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_030925863.1
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179698..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3307915..3307955))
location: region:3179698-3307955:-1
so has part: feature:3307915-3307955:-1:exon
so has part: feature:3300478-3300584:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179698-3179889:-1:exon

position:3307955:-1
position: 3307955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3307915-3307955:-1:exon

position:3307915:-1
position: 3307915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3300478-3300584:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3179698-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X1
translation: MSTEAEQQLLHHARNGNAKEVRQLLETMARNEVIADINCKGRSKSNLGWTPLHLACYFGHRQVVQDLLKAGAEVNVLNDMGDTPLHRAAFTGRKELVMLLLEYNADTTVVNGSGQTAKEVTHAEEIRSMLEAVERTQQRKLEELLLAAAREGKTTELTALLNRPNPPDVNCSDQLGNTPLHCAAYRAHKQCALKLLRSGADPNLKNKNDQKPLDLAQGAEMKHILVNKVIYKALKRYEGPLWKSSRFFGWRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHGFRVPKNSLQQSREDWLEAIEDHSAYSTHYCSQDQLTDEEEEDTVSTVDLKKSLEKAQSCQQRLDREISNFLKMIKEYDMAKEMLPSFLQKVEVVSEASRETCVALSDCLNLFTKQERVKNFKLEQEQEKNKILSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESERSLSRLEAVTAHSFEEEGEHLGSRRHRMSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382431,3383787..3383872,3391999..3392119))
location: region:3179787-3392119:-1
so has part: feature:3391999-3392119:-1:exon
so has part: feature:3383787-3383872:-1:exon
so has part: feature:3382357-3382431:-1:exon
so has part: feature:3358055-3358166:-1:exon
so has part: feature:3347900-3347985:-1:exon
so has part: feature:3346605-3346749:-1:exon
so has part: feature:3334095-3334153:-1:exon
so has part: feature:3333949-3333993:-1:exon
so has part: feature:3332676-3332749:-1:exon
so has part: feature:3332498-3332561:-1:exon
so has part: feature:3329995-3330093:-1:exon
so has part: feature:3326752-3326874:-1:exon
so has part: feature:3318750-3318831:-1:exon
so has part: feature:3300478-3300584:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_010381518.2
type: Protein
SIO_000068: ncbiprotein

position:3179787:-1
position: 3179787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3392119:-1
position: 3392119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3391999-3392119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3383787-3383872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3382357-3382431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3358055-3358166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3347900-3347985:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3346605-3346749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3334095-3334153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3333949-3333993:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3332676-3332749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3332498-3332561:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3329995-3330093:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3326752-3326874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3318750-3318831:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3300478-3300584:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3179787-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X1
translation: MSTEAEQQLLHHARNGNAKEVRQLLETMARNEVIADINCKGRSKSNLGWTPLHLACYFGHRQVVQDLLKAGAEVNVLNDMGDTPLHRAAFTGRKELVMLLLEYNADTTVVNGSGQTAKEVTHAEEIRSMLEAVERTQQRKLEELLLAAAREGKTTELTALLNRPNPPDVNCSDQLGNTPLHCAAYRAHKQCALKLLRSGADPNLKNKNDQKPLDLAQGAEMKHILVNKVIYKALKRYEGPLWKSSRFFGWRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHGFRVPKNSLQQSREDWLEAIEDHSAYSTHYCSQDQLTDEEEEDTVSTVDLKKSLEKAQSCQQRLDREISNFLKMIKEYDMAKEMLPSFLQKVEVVSEASRETCVALSDCLNLFTKQERVKNFKLEQEQEKNKILSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESERSLSRLEAVTAHSFEEEGEHLGSRRHRMSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382431,3383787..3383872,3391999..3392119))
location: region:3179787-3392119:-1
so has part: feature:3391999-3392119:-1:exon
so has part: feature:3383787-3383872:-1:exon
so has part: feature:3382357-3382431:-1:exon
so has part: feature:3358055-3358166:-1:exon
so has part: feature:3347900-3347985:-1:exon
so has part: feature:3346605-3346749:-1:exon
so has part: feature:3334095-3334153:-1:exon
so has part: feature:3333949-3333993:-1:exon
so has part: feature:3332676-3332749:-1:exon
so has part: feature:3332498-3332561:-1:exon
so has part: feature:3329995-3330093:-1:exon
so has part: feature:3326752-3326874:-1:exon
so has part: feature:3318750-3318831:-1:exon
so has part: feature:3300478-3300584:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_010381519.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3391999-3392119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3383787-3383872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3382357-3382431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3358055-3358166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3347900-3347985:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3346605-3346749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3334095-3334153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3333949-3333993:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3332676-3332749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3332498-3332561:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3329995-3330093:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3326752-3326874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3318750-3318831:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3300478-3300584:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3179787-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X1
translation: MSTEAEQQLLHHARNGNAKEVRQLLETMARNEVIADINCKGRSKSNLGWTPLHLACYFGHRQVVQDLLKAGAEVNVLNDMGDTPLHRAAFTGRKELVMLLLEYNADTTVVNGSGQTAKEVTHAEEIRSMLEAVERTQQRKLEELLLAAAREGKTTELTALLNRPNPPDVNCSDQLGNTPLHCAAYRAHKQCALKLLRSGADPNLKNKNDQKPLDLAQGAEMKHILVNKVIYKALKRYEGPLWKSSRFFGWRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHGFRVPKNSLQQSREDWLEAIEDHSAYSTHYCSQDQLTDEEEEDTVSTVDLKKSLEKAQSCQQRLDREISNFLKMIKEYDMAKEMLPSFLQKVEVVSEASRETCVALSDCLNLFTKQERVKNFKLEQEQEKNKILSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESERSLSRLEAVTAHSFEEEGEHLGSRRHRMSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382431,3383787..3383872,3391999..3392119))
location: region:3179787-3392119:-1
so has part: feature:3391999-3392119:-1:exon
so has part: feature:3383787-3383872:-1:exon
so has part: feature:3382357-3382431:-1:exon
so has part: feature:3358055-3358166:-1:exon
so has part: feature:3347900-3347985:-1:exon
so has part: feature:3346605-3346749:-1:exon
so has part: feature:3334095-3334153:-1:exon
so has part: feature:3333949-3333993:-1:exon
so has part: feature:3332676-3332749:-1:exon
so has part: feature:3332498-3332561:-1:exon
so has part: feature:3329995-3330093:-1:exon
so has part: feature:3326752-3326874:-1:exon
so has part: feature:3318750-3318831:-1:exon
so has part: feature:3300478-3300584:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_030781718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3391999-3392119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3383787-3383872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3382357-3382431:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3358055-3358166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3347900-3347985:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3346605-3346749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3334095-3334153:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3333949-3333993:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3332676-3332749:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3332498-3332561:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3329995-3330093:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3326752-3326874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3318750-3318831:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3300478-3300584:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3179787-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X2
translation: MGDTPLHRAAFTGRKELVMLLLEYNADTTVVNGSGQTAKEVTHAEEIRSMLEAVERTQQRKLEELLLAAAREGKTTELTALLNRPNPPDVNCSDQLGNTPLHCAAYRAHKQCALKLLRSGADPNLKNKNDQKPLDLAQGAEMKHILVNKVIYKALKRYEGPLWKSSRFFGWRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHGFRVPKNSLQQSREDWLEAIEDHSAYSTHYCSQDQLTDEEEEDTVSTVDLKKSLEKAQSCQQRLDREISNFLKMIKEYDMAKEMLPSFLQKVEVVSEASRETCVALSDCLNLFTKQERVKNFKLEQEQEKNKILSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESERSLSRLEAVTAHSFEEEGEHLGSRRHRMSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382401))
location: region:3179787-3382401:-1
so has part: feature:3382357-3382401:-1:exon
so has part: feature:3358055-3358166:-1:exon
so has part: feature:3347900-3347985:-1:exon
so has part: feature:3346605-3346749:-1:exon
so has part: feature:3334095-3334153:-1:exon
so has part: feature:3333949-3333993:-1:exon
so has part: feature:3332676-3332749:-1:exon
so has part: feature:3332498-3332561:-1:exon
so has part: feature:3329995-3330093:-1:exon
so has part: feature:3326752-3326874:-1:exon
so has part: feature:3318750-3318831:-1:exon
so has part: feature:3300478-3300584:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_030781719.1
type: Protein
SIO_000068: ncbiprotein

position:3382401:-1
position: 3382401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3382357-3382401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3358055-3358166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3347900-3347985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3346605-3346749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3334095-3334153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3333949-3333993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3332676-3332749:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3332498-3332561:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3329995-3330093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3326752-3326874:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318750-3318831:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3300478-3300584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3179787-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X2
translation: MGDTPLHRAAFTGRKELVMLLLEYNADTTVVNGSGQTAKEVTHAEEIRSMLEAVERTQQRKLEELLLAAAREGKTTELTALLNRPNPPDVNCSDQLGNTPLHCAAYRAHKQCALKLLRSGADPNLKNKNDQKPLDLAQGAEMKHILVNKVIYKALKRYEGPLWKSSRFFGWRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHGFRVPKNSLQQSREDWLEAIEDHSAYSTHYCSQDQLTDEEEEDTVSTVDLKKSLEKAQSCQQRLDREISNFLKMIKEYDMAKEMLPSFLQKVEVVSEASRETCVALSDCLNLFTKQERVKNFKLEQEQEKNKILSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESERSLSRLEAVTAHSFEEEGEHLGSRRHRMSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382401))
location: region:3179787-3382401:-1
so has part: feature:3382357-3382401:-1:exon
so has part: feature:3358055-3358166:-1:exon
so has part: feature:3347900-3347985:-1:exon
so has part: feature:3346605-3346749:-1:exon
so has part: feature:3334095-3334153:-1:exon
so has part: feature:3333949-3333993:-1:exon
so has part: feature:3332676-3332749:-1:exon
so has part: feature:3332498-3332561:-1:exon
so has part: feature:3329995-3330093:-1:exon
so has part: feature:3326752-3326874:-1:exon
so has part: feature:3318750-3318831:-1:exon
so has part: feature:3300478-3300584:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_030781720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3382357-3382401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3358055-3358166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3347900-3347985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3346605-3346749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3334095-3334153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3333949-3333993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3332676-3332749:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3332498-3332561:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3329995-3330093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3326752-3326874:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318750-3318831:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3300478-3300584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3179787-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X2
translation: MGDTPLHRAAFTGRKELVMLLLEYNADTTVVNGSGQTAKEVTHAEEIRSMLEAVERTQQRKLEELLLAAAREGKTTELTALLNRPNPPDVNCSDQLGNTPLHCAAYRAHKQCALKLLRSGADPNLKNKNDQKPLDLAQGAEMKHILVNKVIYKALKRYEGPLWKSSRFFGWRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHGFRVPKNSLQQSREDWLEAIEDHSAYSTHYCSQDQLTDEEEEDTVSTVDLKKSLEKAQSCQQRLDREISNFLKMIKEYDMAKEMLPSFLQKVEVVSEASRETCVALSDCLNLFTKQERVKNFKLEQEQEKNKILSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESERSLSRLEAVTAHSFEEEGEHLGSRRHRMSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334153,3346605..3346749,3347900..3347985,3358055..3358166,3382357..3382401))
location: region:3179787-3382401:-1
so has part: feature:3382357-3382401:-1:exon
so has part: feature:3358055-3358166:-1:exon
so has part: feature:3347900-3347985:-1:exon
so has part: feature:3346605-3346749:-1:exon
so has part: feature:3334095-3334153:-1:exon
so has part: feature:3333949-3333993:-1:exon
so has part: feature:3332676-3332749:-1:exon
so has part: feature:3332498-3332561:-1:exon
so has part: feature:3329995-3330093:-1:exon
so has part: feature:3326752-3326874:-1:exon
so has part: feature:3318750-3318831:-1:exon
so has part: feature:3300478-3300584:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_030781721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3382357-3382401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3358055-3358166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3347900-3347985:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3346605-3346749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3334095-3334153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3333949-3333993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3332676-3332749:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3332498-3332561:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3329995-3330093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3326752-3326874:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3318750-3318831:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3300478-3300584:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3179787-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X3
translation: MKHILVNKVIYKALKRYEGPLWKSSRFFGWRLFWVVLEHGVLSWYRKQPDAVHNIYRQGCKHLTQAVCTVKSTDSCLFFIKCFDDTIHGFRVPKNSLQQSREDWLEAIEDHSAYSTHYCSQDQLTDEEEEDTVSTVDLKKSLEKAQSCQQRLDREISNFLKMIKEYDMAKEMLPSFLQKVEVVSEASRETCVALSDCLNLFTKQERVKNFKLEQEQEKNKILSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESERSLSRLEAVTAHSFEEEGEHLGSRRHRMSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300584,3318750..3318831,3326752..3326874,3329995..3330093,3332498..3332561,3332676..3332749,3333949..3333993,3334095..3334118))
location: region:3179787-3334118:-1
so has part: feature:3334095-3334118:-1:exon
so has part: feature:3333949-3333993:-1:exon
so has part: feature:3332676-3332749:-1:exon
so has part: feature:3332498-3332561:-1:exon
so has part: feature:3329995-3330093:-1:exon
so has part: feature:3326752-3326874:-1:exon
so has part: feature:3318750-3318831:-1:exon
so has part: feature:3300478-3300584:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_030781722.1
type: Protein
SIO_000068: ncbiprotein

position:3334118:-1
position: 3334118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3334095-3334118:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3333949-3333993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3332676-3332749:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3332498-3332561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3329995-3330093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3326752-3326874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3318750-3318831:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3300478-3300584:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3179787-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X5
translation: MTWLKVKNFKLEQEQEKNKILSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESERSLSRLEAVTAHSFEEEGEHLGSRRHRMSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3318750..3318764))
location: region:3179787-3318764:-1
so has part: feature:3318750-3318764:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_030781724.1
type: Protein
SIO_000068: ncbiprotein

position:3318764:-1
position: 3318764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3318750-3318764:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3179787-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X4
translation: MLPSFLQKVEVVSEASRETCVALSDCLNLFTKQERVKNFKLEQEQEKNKILSEALETLATEHHELEQSLVKGSPPASILSEDEFYDALSDSESERSLSRLEAVTAHSFEEEGEHLGSRRHRMSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243342,3257908..3258070,3300478..3300582))
location: region:3179787-3300582:-1
so has part: feature:3300478-3300582:-1:exon
so has part: feature:3257908-3258070:-1:exon
so has part: feature:3243186-3243342:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_030781723.1
type: Protein
SIO_000068: ncbiprotein

position:3300582:-1
position: 3300582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3300478-3300582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3257908-3258070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3243186-3243342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3179787-3179889:-1:exon

OSBPL1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: OSBPL1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oxysterol-binding protein-related protein 1 isoform X6
translation: MSEEKDCGGGDALSNGIKKHRTSLPSPMFSRNDFSIWSILRKCIGMELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSLSDPVERMQCVAAFAVSAVASQWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVEAEPKGTITLELLEHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGDKCVLNFKPCGLFGKELHKVEGYIQDKSKKKLCALYGKWTECLYSVDPATFDAYKKNDKKNTEEKKNSKQMSTSEESDEMPMPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIPKTDCRLRPDIRAMENGEIDQASEEKKRLEEKQRAARKNRSKSEEDWKTRWFHQGPNPYNGAQDWIYSGSYWDRNYFNLPDIY
SIO_010081: OSBPL1A
subclass of: SO_0000673
so part of: OSBPL1A
location: complement(join(3179787..3179889,3181666..3181756,3183191..3183314,3183939..3184055,3187358..3187484,3188485..3188574,3189469..3189576,3195157..3195339,3196989..3197086,3198067..3198201,3213649..3213724,3243186..3243247))
location: region:3179787-3243247:-1
so has part: feature:3243186-3243247:-1:exon
so has part: feature:3213649-3213724:-1:exon
so has part: feature:3198067-3198201:-1:exon
so has part: feature:3196989-3197086:-1:exon
so has part: feature:3195157-3195339:-1:exon
so has part: feature:3189469-3189576:-1:exon
so has part: feature:3188485-3188574:-1:exon
so has part: feature:3187358-3187484:-1:exon
so has part: feature:3183939-3184055:-1:exon
so has part: feature:3183191-3183314:-1:exon
so has part: feature:3181666-3181756:-1:exon
so has part: feature:3179787-3179889:-1:exon

XP_010381520.1
type: Protein
SIO_000068: ncbiprotein

position:3243247:-1
position: 3243247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3243186-3243247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3213649-3213724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3198067-3198201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3196989-3197086:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3195157-3195339:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3189469-3189576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3188485-3188574:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3187358-3187484:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3183939-3184055:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3183191-3183314:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3181666-3181756:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3179787-3179889:-1:exon

LOC115895594
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895594
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(3187537..3187655)
location: region:3187537-3187655:-1
so has part: feature:3187537-3187655:-1:exon

115895594
type: Gene
SIO_000068: ncbigene

position:3187537:-1
position: 3187537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3187655:-1
position: 3187655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3187537-3187655:-1:exon

LOC115895594
type: Exon
subclass of: SO_0000147
RO_0002162: 61622
gene: LOC115895594
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC115895594
subclass of: SO_0000673
so part of: LOC115895594
location: complement(3187537..3187655)
location: region:3187537-3187655:-1
so has part: feature:3187537-3187655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3187537-3187655:-1:exon

LOC115895621
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC115895621
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3236414..3236518
location: region:3236414-3236518:1
so has part: feature:3236414-3236518:1:exon
subclass of: SO_0000623

115895621
type: Gene
SIO_000068: ncbigene

position:3236414:1
position: 3236414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3236518:1
position: 3236518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3236414-3236518:1:exon

LOC115895621
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61622
nc RNA class: snRNA
gene: LOC115895621
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004055800.1
SIO_010081: LOC115895621
subclass of: SO_0000673
so part of: LOC115895621
location: 3236414..3236518
location: region:3236414-3236518:1
so has part: feature:3236414-3236518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3236414-3236518:1:exon

IMPACT
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: IMPACT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3445242..3476701
location: region:3445242-3476701:1
so has part: feature:3445242-3476701:1:exon
subclass of: SO_0000010

104678030
type: Gene
SIO_000068: ncbigene

position:3445242:1
position: 3445242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3476701:1
position: 3476701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3445242-3476701:1:exon

IMPACT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: IMPACT
product: impact RWD domain protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 168 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010383208.2
SIO_010081: IMPACT
subclass of: SO_0000673
so part of: IMPACT
location: join(3445242..3445393,3446517..3446645,3447476..3447528,3449569..3449631,3457118..3457203,3463434..3463556,3465977..3466080,3468308..3468381,3470995..3471085,3472730..3472864,3473947..3476701)
location: region:3445242-3476701:1
so has part: feature:3445242-3445393:1:exon
so has part: feature:3446517-3446645:1:exon
so has part: feature:3447476-3447528:1:exon
so has part: feature:3449569-3449631:1:exon
so has part: feature:3457118-3457203:1:exon
so has part: feature:3463434-3463556:1:exon
so has part: feature:3465977-3466080:1:exon
so has part: feature:3468308-3468381:1:exon
so has part: feature:3470995-3471085:1:exon
so has part: feature:3472730-3472864:1:exon
so has part: feature:3473947-3476701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3445242-3445393:1:exon

position:3445393:1
position: 3445393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3446517-3446645:1:exon

position:3446517:1
position: 3446517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3446645:1
position: 3446645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3447476-3447528:1:exon

position:3447476:1
position: 3447476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3447528:1
position: 3447528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3449569-3449631:1:exon

position:3449569:1
position: 3449569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3449631:1
position: 3449631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3457118-3457203:1:exon

position:3457118:1
position: 3457118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3457203:1
position: 3457203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3463434-3463556:1:exon

position:3463434:1
position: 3463434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3463556:1
position: 3463556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3465977-3466080:1:exon

position:3465977:1
position: 3465977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3466080:1
position: 3466080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3468308-3468381:1:exon

position:3468308:1
position: 3468308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3468381:1
position: 3468381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3470995-3471085:1:exon

position:3470995:1
position: 3470995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3471085:1
position: 3471085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3472730-3472864:1:exon

position:3472730:1
position: 3472730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3472864:1
position: 3472864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3473947-3476701:1:exon

position:3473947:1
position: 3473947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IMPACT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: IMPACT
product: impact RWD domain protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 132 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010383210.2
SIO_010081: IMPACT
subclass of: SO_0000673
so part of: IMPACT
location: join(3445268..3445848,3446517..3446645,3447476..3447528,3449569..3449631,3457118..3457203,3463434..3463556,3465977..3466080,3468308..3468381,3470995..3471085,3472730..3472864,3473947..3476701)
location: region:3445268-3476701:1
so has part: feature:3445268-3445848:1:exon
so has part: feature:3446517-3446645:1:exon
so has part: feature:3447476-3447528:1:exon
so has part: feature:3449569-3449631:1:exon
so has part: feature:3457118-3457203:1:exon
so has part: feature:3463434-3463556:1:exon
so has part: feature:3465977-3466080:1:exon
so has part: feature:3468308-3468381:1:exon
so has part: feature:3470995-3471085:1:exon
so has part: feature:3472730-3472864:1:exon
so has part: feature:3473947-3476701:1:exon

position:3445268:1
position: 3445268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3445268-3445848:1:exon

position:3445848:1
position: 3445848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3446517-3446645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3447476-3447528:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3449569-3449631:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457118-3457203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3463434-3463556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3465977-3466080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3468308-3468381:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3470995-3471085:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3472730-3472864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3473947-3476701:1:exon

IMPACT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: IMPACT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IMPACT isoform X1
translation: MAEGDAGSDQRQNEEIEAMAAIYGEEWCVIDDCAKIFCIRISDDIDDPKWTLCLQVMLPNEYPGTAPPIYQLNAPWLKGQERADLSNSLEEIYIQNIGESILYLWVEKIRDVLIQKSQMTEPGPDVKKKTEEEDVECEDDLILACQPESSVKALDFDISETRTEVEVEELPPIDHGIPITDRRSTFQAHLAPVVCPKQVKMVLSKLYENKKIASATHNIYAYRIYCEDKQTFLQDCEDDGETAAGGRLLHLMEILNVKNVMVVVSRWYGGILLGPDRFKHINNCARNILVEKNYTNSPEESSKSLGKNKKVRKEKKKNEH
SIO_010081: IMPACT
subclass of: SO_0000673
so part of: IMPACT
location: join(3445358..3445393,3446517..3446645,3447476..3447528,3449569..3449631,3457118..3457203,3463434..3463556,3465977..3466080,3468308..3468381,3470995..3471085,3472730..3472864,3473947..3474015)
location: region:3445358-3474015:1
so has part: feature:3445358-3445393:1:exon
so has part: feature:3446517-3446645:1:exon
so has part: feature:3447476-3447528:1:exon
so has part: feature:3449569-3449631:1:exon
so has part: feature:3457118-3457203:1:exon
so has part: feature:3463434-3463556:1:exon
so has part: feature:3465977-3466080:1:exon
so has part: feature:3468308-3468381:1:exon
so has part: feature:3470995-3471085:1:exon
so has part: feature:3472730-3472864:1:exon
so has part: feature:3473947-3474015:1:exon

XP_010381510.2
type: Protein
SIO_000068: ncbiprotein

position:3445358:1
position: 3445358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3474015:1
position: 3474015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3445358-3445393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3446517-3446645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3447476-3447528:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3449569-3449631:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457118-3457203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3463434-3463556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3465977-3466080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3468308-3468381:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3470995-3471085:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3472730-3472864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3473947-3474015:1:exon

IMPACT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: IMPACT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein IMPACT isoform X2
translation: MELSLCLVHNEEIEAMAAIYGEEWCVIDDCAKIFCIRISDDIDDPKWTLCLQVMLPNEYPGTAPPIYQLNAPWLKGQERADLSNSLEEIYIQNIGESILYLWVEKIRDVLIQKSQMTEPGPDVKKKTEEEDVECEDDLILACQPESSVKALDFDISETRTEVEVEELPPIDHGIPITDRRSTFQAHLAPVVCPKQVKMVLSKLYENKKIASATHNIYAYRIYCEDKQTFLQDCEDDGETAAGGRLLHLMEILNVKNVMVVVSRWYGGILLGPDRFKHINNCARNILVEKNYTNSPEESSKSLGKNKKVRKEKKKNEH
SIO_010081: IMPACT
subclass of: SO_0000673
so part of: IMPACT
location: join(3445822..3445848,3446517..3446645,3447476..3447528,3449569..3449631,3457118..3457203,3463434..3463556,3465977..3466080,3468308..3468381,3470995..3471085,3472730..3472864,3473947..3474015)
location: region:3445822-3474015:1
so has part: feature:3445822-3445848:1:exon
so has part: feature:3446517-3446645:1:exon
so has part: feature:3447476-3447528:1:exon
so has part: feature:3449569-3449631:1:exon
so has part: feature:3457118-3457203:1:exon
so has part: feature:3463434-3463556:1:exon
so has part: feature:3465977-3466080:1:exon
so has part: feature:3468308-3468381:1:exon
so has part: feature:3470995-3471085:1:exon
so has part: feature:3472730-3472864:1:exon
so has part: feature:3473947-3474015:1:exon

XP_010381512.2
type: Protein
SIO_000068: ncbiprotein

position:3445822:1
position: 3445822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3445822-3445848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3446517-3446645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3447476-3447528:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3449569-3449631:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457118-3457203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3463434-3463556:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3465977-3466080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3468308-3468381:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3470995-3471085:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3472730-3472864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3473947-3474015:1:exon

HRH4
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: HRH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3499285..3499500
location: region:3499285-3499500:1
so has part: feature:3499285-3499500:1:exon
subclass of: SO_0000010

115892010
type: Gene
SIO_000068: ncbigene

position:3499285:1
position: 3499285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3499500:1
position: 3499500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3499285-3499500:1:exon

HRH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: HRH4
product: histamine receptor H4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein
transcript id: XM_030926176.1
SIO_010081: HRH4
subclass of: SO_0000673
so part of: HRH4
location: 3499285..3499500
location: region:3499285-3499500:1
so has part: feature:3499285-3499500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3499285-3499500:1:exon

HRH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: HRH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H4 receptor
translation: MPDTNSTIDLSLSTRITLAFFMSLLAFAIMLGNAVVILAFVVDKNLRHRISYFFLNLAISDFFVGKLYVFI
SIO_010081: HRH4
subclass of: SO_0000673
so part of: HRH4
location: 3499285..3499500
location: region:3499285-3499500:1
so has part: feature:3499285-3499500:1:exon

XP_030782036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499285-3499500:1:exon

LOC104678033
type: Gene
subclass of: SO_0000704
RO_0002162: 61622
gene: LOC104678033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3501784..3531323)
location: region:3501784-3531323:-1
so has part: feature:3501784-3531323:-1:exon
subclass of: SO_0000010

104678033
type: Gene
SIO_000068: ncbigene

position:3501784:-1
position: 3501784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3531323:-1
position: 3531323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3501784-3531323:-1:exon

LOC104678033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61622
gene: LOC104678033
product: histamine H4 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 6 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_030926177.1
SIO_010081: LOC104678033
subclass of: SO_0000673
so part of: LOC104678033
location: complement(join(3501784..3503447,3504983..3504987,3505641..3505727,3528865..3529000,3530065..3530119,3531256..3531323))
location: region:3501784-3531323:-1
so has part: feature:3531256-3531323:-1:exon
so has part: feature:3530065-3530119:-1:exon
so has part: feature:3528865-3529000:-1:exon
so has part: feature:3505641-3505727:-1:exon
so has part: feature:3504983-3504987:-1:exon
so has part: feature:3501784-3503447:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3531256-3531323:-1:exon

position:3531256:-1
position: 3531256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3530065-3530119:-1:exon

position:3530065:-1
position: 3530065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3530119:-1
position: 3530119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3528865-3529000:-1:exon

position:3528865:-1
position: 3528865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3529000:-1
position: 3529000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3505641-3505727:-1:exon

position:3505641:-1
position: 3505641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3505727:-1
position: 3505727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3504983-3504987:-1:exon

position:3504983:-1
position: 3504983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3504987:-1
position: 3504987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3501784-3503447:-1:exon

position:3503447:-1
position: 3503447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104678033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61622
gene: LOC104678033
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(3505669..3505671),aa:OTHER)
product: LOW QUALITY PROTEIN: histamine H4 receptor
translation: MVSTQQLRNSIQVSIQVDVTSHRLLCAAAEWMNGFVFSSDIWSSYYALKCSEGTGDPKVKQILPTCKYAHWFLFRDNVKCTGESPTGQNITKLIKCESSVKYNLYXLHNKGISLSNAVSYRTQHTGISKIVTLMVAVWVLAFLVNGPMILVSESWKDEGSECEPGFFSEWYILAITSFLEFLIPVILVAYFNMNIYWSLWKRDRLSRCQSHPGPTAVCSNICGQSFRRGLSSRGSLSASTEMPVSLHSERQRRKSSLMSSLRTKMNSNRIASKMGSFSQSDSVALHQREHAELLRARRLAKSLAILLGVFAVCWAPYSLFTIVLSFYSSETGPKSVWYRIAFWLQWFNSFVNPLLYPLCHKRFQKAFSKIFFIKKQPLPSPHSRSVSS
SIO_010081: LOC104678033
subclass of: SO_0000673
so part of: LOC104678033
location: complement(join(3502632..3503447,3504983..3504987,3505641..3505727,3528865..3529000,3530065..3530119,3531256..3531323))
location: region:3502632-3531323:-1
so has part: feature:3531256-3531323:-1:exon
so has part: feature:3530065-3530119:-1:exon
so has part: feature:3528865-3529000:-1:exon
so has part: feature:3505641-3505727:-1:exon
so has part: feature:3504983-3504987:-1:exon
so has part: feature:3502632-3503447:-1:exon

XP_030782037.1
type: Protein
SIO_000068: ncbiprotein

position:3502632:-1
position: 3502632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3531256-3531323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3530065-3530119:-1:exon