Arvicanthis niloticus isolate mArvNil1 chromosome 19, mArvNil1.pat.X, whole genome shotgun sequence.
type: Entry
definition: Arvicanthis niloticus isolate mArvNil1 chromosome 19, mArvNil1.pat.X, whole genome shotgun sequence.
sequence version: NC_047676.1
sequence date: 2020-05-16
sequence: sequence
division: CON
label: NC_047676.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA632612
dblink: SAMN12611849
keyword: WGS
keyword: RefSeq
source: Arvicanthis niloticus (African grass rat)
organism: Arvicanthis niloticus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022269.1.\nAssembly name: mArvNil1.pat.X\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/27. The original whole-genome shotgun project has the\naccession JAAOMG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JAN-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Freebayes v. 1.3.1;\n gEVAL manual curation v. 2020-01-16; VGP\n trio assembly pipeline v. 1.6\nAssembly Name :: mArvNil1.pat.X\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.95x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Arvicanthis niloticus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 53135676
topology: linear
so has quality: SO_0000987
location: 1..53135676
location: region:1-53135676:1
RO_0002162: 61156

NC_047676
type: RefSeq
SIO_000068: refseq

PRJNA632612
type: BioProject
SIO_000068: bioproject

SAMN12611849
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53135676:1
position: 53135676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-53135676:1:source
so part of: sequence
organism: Arvicanthis niloticus
mol type: genomic DNA
isolate: mArvNil1
specimen voucher: T564M
chromosome: 19
sex: male
tissue type: Spleen (genome), brain & testis (transcriptome)
dev stage: adult
country: USA: Santa Barbara
lat lon: 34.41938 N 119.69905 W
collection date: 06-Mar-2019
collected by: Huishi Toh

61156
type: Taxonomy
SIO_000068: taxonomy

LOC117723923
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 79894..89564
location: region:79894-89564:1
so has part: feature:79894-89564:1:exon

117723923
type: Gene
SIO_000068: ncbigene

position:79894:1
position: 79894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89564:1
position: 89564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79894-89564:1:exon

LOC117723923
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723923
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723923
subclass of: SO_0000673
so part of: LOC117723923
location: 79894..80099
location: region:79894-80099:1
so has part: feature:79894-80099:1:exon

position:80099:1
position: 80099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79894-80099:1:exon

LOC117723923
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723923
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723923
subclass of: SO_0000673
so part of: LOC117723923
location: 82700..82982
location: region:82700-82982:1
so has part: feature:82700-82982:1:exon

position:82700:1
position: 82700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82982:1
position: 82982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82700-82982:1:exon

LOC117723872
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(83195..84104)
location: region:83195-84104:-1
so has part: feature:83195-84104:-1:exon

117723872
type: Gene
SIO_000068: ncbigene

position:83195:-1
position: 83195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84104:-1
position: 84104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83195-84104:-1:exon

LOC117723872
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723872
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723872
subclass of: SO_0000673
so part of: LOC117723872
location: complement(83195..83206)
location: region:83195-83206:-1
so has part: feature:83195-83206:-1:exon

position:83206:-1
position: 83206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83195-83206:-1:exon

LOC117723872
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723872
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723872
subclass of: SO_0000673
so part of: LOC117723872
location: complement(83411..84104)
location: region:83411-84104:-1
so has part: feature:83411-84104:-1:exon

position:83411:-1
position: 83411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83411-84104:-1:exon

LOC117723923
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723923
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723923
subclass of: SO_0000673
so part of: LOC117723923
location: 84194..84995
location: region:84194-84995:1
so has part: feature:84194-84995:1:exon

position:84194:1
position: 84194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84995:1
position: 84995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84194-84995:1:exon

LOC117723923
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723923
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723923
subclass of: SO_0000673
so part of: LOC117723923
location: 85987..86210
location: region:85987-86210:1
so has part: feature:85987-86210:1:exon

position:85987:1
position: 85987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86210:1
position: 86210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85987-86210:1:exon

LOC117723923
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723923
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723923
subclass of: SO_0000673
so part of: LOC117723923
location: 87545..87675
location: region:87545-87675:1
so has part: feature:87545-87675:1:exon

position:87545:1
position: 87545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87675:1
position: 87675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87545-87675:1:exon

LOC117723923
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723923
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723923
subclass of: SO_0000673
so part of: LOC117723923
location: 88672..89564
location: region:88672-89564:1
so has part: feature:88672-89564:1:exon

position:88672:1
position: 88672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88672-89564:1:exon

LOC117723688
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 101386..111010
location: region:101386-111010:1
so has part: feature:101386-111010:1:exon

117723688
type: Gene
SIO_000068: ncbigene

position:101386:1
position: 101386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111010:1
position: 111010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101386-111010:1:exon

LOC117723688
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723688
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723688
subclass of: SO_0000673
so part of: LOC117723688
location: 101386..101395
location: region:101386-101395:1
so has part: feature:101386-101395:1:exon

position:101395:1
position: 101395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101386-101395:1:exon

LOC117723688
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723688
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723688
subclass of: SO_0000673
so part of: LOC117723688
location: 103611..103827
location: region:103611-103827:1
so has part: feature:103611-103827:1:exon

position:103611:1
position: 103611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103827:1
position: 103827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103611-103827:1:exon

LOC117723688
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723688
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723688
subclass of: SO_0000673
so part of: LOC117723688
location: 105236..105518
location: region:105236-105518:1
so has part: feature:105236-105518:1:exon

position:105236:1
position: 105236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105518:1
position: 105518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105236-105518:1:exon

LOC117723688
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723688
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723688
subclass of: SO_0000673
so part of: LOC117723688
location: 105965..106767
location: region:105965-106767:1
so has part: feature:105965-106767:1:exon

position:105965:1
position: 105965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106767:1
position: 106767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105965-106767:1:exon

LOC117723688
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723688
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723688
subclass of: SO_0000673
so part of: LOC117723688
location: 107862..108088
location: region:107862-108088:1
so has part: feature:107862-108088:1:exon

position:107862:1
position: 107862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108088:1
position: 108088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107862-108088:1:exon

LOC117723688
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723688
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723688
subclass of: SO_0000673
so part of: LOC117723688
location: 110313..111010
location: region:110313-111010:1
so has part: feature:110313-111010:1:exon

position:110313:1
position: 110313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110313-111010:1:exon

LOC117723914
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 132093..160766
location: region:132093-160766:1
so has part: feature:132093-160766:1:exon
subclass of: SO_0000010

117723914
type: Gene
SIO_000068: ncbigene

position:132093:1
position: 132093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160766:1
position: 160766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132093-160766:1:exon

LOC117723914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723914
product: vomeronasal type-2 receptor 116-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_034523499.1
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,144116..144344,159874..160766)
location: region:132093-160766:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:144116-144344:1:exon
so has part: feature:159874-160766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

position:132298:1
position: 132298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

position:141729:1
position: 141729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142011:1
position: 142011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

position:142454:1
position: 142454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143257:1
position: 143257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:144116-144344:1:exon

position:144116:1
position: 144116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144344:1
position: 144344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:159874-160766:1:exon

position:159874:1
position: 159874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723914
product: vomeronasal type-2 receptor 116-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
transcript id: XM_034523496.1
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,144116..144340,145588..145711,159871..160766)
location: region:132093-160766:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:144116-144340:1:exon
so has part: feature:145588-145711:1:exon
so has part: feature:159871-160766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144116-144340:1:exon

position:144340:1
position: 144340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:145588-145711:1:exon

position:145588:1
position: 145588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145711:1
position: 145711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:159871-160766:1:exon

position:159871:1
position: 159871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723914
product: vomeronasal type-2 receptor 116-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
transcript id: XM_034523498.1
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,144116..144340,145588..145711,159874..160766)
location: region:132093-160766:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:144116-144340:1:exon
so has part: feature:145588-145711:1:exon
so has part: feature:159874-160766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144116-144340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145588-145711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159874-160766:1:exon

LOC117723914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X3
translation: MKKLHAFSISLLLLKVSLIMCSLTDLSCFWRINNSEDHDRDLQSDCGFVLWLNEEPIEKRVYKEFADFRIPARRYEFFLVMFFATEEINKNPYLLPNMSLIFTMFLALCDDTLELLDKVYSEQKKCLKFMNYNCDIMPNCDVELTGPSWKASLKLTTYSKTTKVFFGPFNPNLSDHDQFPYIHQVATKDTHLSDGMVSLMLHFRWNWIGLVISDNDQSIQFLSDLREEMQMYEICLAFVNMIPETMQMYMTRAKIYDKQIMTSSAKVVIIYGEMNSTVEISFRRWGYLCAQRIWITTSQWDVIINKKDFTLDFFHGTVTFAHHHSEITVFRNFMETMNTTIYPVNISDSILVWNYFNCSISKNSNKMDHFTFNNTLEWLALHKYDIVLSEEGYNLYNAVYAVAHTYHELMLQQVESQKMAKPKGVFTDCQQVASLLKTRVFTNSVGELVNMSHRKNQCADYDIFIIWNFPQGLGLKVKIGSYFPCLPQSQQLHISEDLEWATGGTSVDMEQCVKCPDDKYANIEQTHCLQRAVSFLAYEDPLGLALACMALCFSAITVLVLVTFVKHKDTRIVKANNCILSYILLISLICCFLCSLLFIGRPNQATCILQQTTFGVFFTVAVSTVLAKTITVVMAFKLTTPGRRMRGMLASGAPNLVIPICTLIQLVLYGTWLVTSPPYIDRDIQSEHGKTIIICNKGSVIAFHFVLGYLGSLALGSFTVAFLARNLPDRFNEAKFLTFSMLVFCSVWITFLPVYHSTRGKVMVVVEVFSILASSAGLLGCIFVPKCYAILVRPDSNFIQKYKD
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,144116..144344,159874..160766)
location: region:132093-160766:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:144116-144344:1:exon
so has part: feature:159874-160766:1:exon

XP_034379390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144116-144344:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159874-160766:1:exon

LOC117723914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X1
translation: MKKLHAFSISLLLLKVSLIMCSLTDLSCFWRINNSEDHDRDLQSDCGFVLWLNEEPIEKRVYKEFADFRIPARRYEFFLVMFFATEEINKNPYLLPNMSLIFTMFLALCDDTLELLDKVYSEQKKCLKFMNYNCDIMPNCDVELTGPSWKASLKLTTYSKTTKVFFGPFNPNLSDHDQFPYIHQVATKDTHLSDGMVSLMLHFRWNWIGLVISDNDQSIQFLSDLREEMQMYEICLAFVNMIPETMQMYMTRAKIYDKQIMTSSAKVVIIYGEMNSTVEISFRRWGYLCAQRIWITTSQWDVIINKKDFTLDFFHGTVTFAHHHSEITVFRNFMETMNTTIYPVNISDSILVWNYFNCSISKNSNKMDHFTFNNTLEWLALHKYDIVLSEEGYNLYNAVYAVAHTYHELMLQQVESQKMAKPKGVFTDCQQVASLLKTRVFTNSVGELVNMSHRKNQCADYDIFIIWNFPQGLGLKVKIGSYFPCLPQSQQLHISEDLEWATGGTSVPSSMCSVTCTAGFRKIHQKETADCCFDCVQCPENEVSNETADMEQCVKCPDDKYANIEQTHCLQRAVSFLAYEDPLGLALACMALCFSAITVLVLVTFVKHKDTRIVKANNCILSYILLISLICCFLCSLLFIGRPNQATCILQQTTFGVFFTVAVSTVLAKTITVVMAFKLTTPGRRMRGMLASGAPNLVIPICTLIQLVLYGTWLVTSPPYIDRDIQSEHGKTIIICNKGSVIAFHFVLGYLGSLALGSFTVAFLARNLPDRFNEAKFLTFSMLVFCSVWITFLPVYHSTRGKVMVVVEVFSILASSAGLLGCIFVPKCYAILVRPDSNFIQKYKD
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,144116..144340,145588..145711,159871..160766)
location: region:132093-160766:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:144116-144340:1:exon
so has part: feature:145588-145711:1:exon
so has part: feature:159871-160766:1:exon

XP_034379387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144116-144340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145588-145711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159871-160766:1:exon

LOC117723914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X2
translation: MKKLHAFSISLLLLKVSLIMCSLTDLSCFWRINNSEDHDRDLQSDCGFVLWLNEEPIEKRVYKEFADFRIPARRYEFFLVMFFATEEINKNPYLLPNMSLIFTMFLALCDDTLELLDKVYSEQKKCLKFMNYNCDIMPNCDVELTGPSWKASLKLTTYSKTTKVFFGPFNPNLSDHDQFPYIHQVATKDTHLSDGMVSLMLHFRWNWIGLVISDNDQSIQFLSDLREEMQMYEICLAFVNMIPETMQMYMTRAKIYDKQIMTSSAKVVIIYGEMNSTVEISFRRWGYLCAQRIWITTSQWDVIINKKDFTLDFFHGTVTFAHHHSEITVFRNFMETMNTTIYPVNISDSILVWNYFNCSISKNSNKMDHFTFNNTLEWLALHKYDIVLSEEGYNLYNAVYAVAHTYHELMLQQVESQKMAKPKGVFTDCQQVASLLKTRVFTNSVGELVNMSHRKNQCADYDIFIIWNFPQGLGLKVKIGSYFPCLPQSQQLHISEDLEWATGGTSVPSSMCSVTCTAGFRKIHQKETADCCFDCVQCPENEVSNETDMEQCVKCPDDKYANIEQTHCLQRAVSFLAYEDPLGLALACMALCFSAITVLVLVTFVKHKDTRIVKANNCILSYILLISLICCFLCSLLFIGRPNQATCILQQTTFGVFFTVAVSTVLAKTITVVMAFKLTTPGRRMRGMLASGAPNLVIPICTLIQLVLYGTWLVTSPPYIDRDIQSEHGKTIIICNKGSVIAFHFVLGYLGSLALGSFTVAFLARNLPDRFNEAKFLTFSMLVFCSVWITFLPVYHSTRGKVMVVVEVFSILASSAGLLGCIFVPKCYAILVRPDSNFIQKYKD
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,144116..144340,145588..145711,159874..160766)
location: region:132093-160766:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:144116-144340:1:exon
so has part: feature:145588-145711:1:exon
so has part: feature:159874-160766:1:exon

XP_034379389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144116-144340:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145588-145711:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159874-160766:1:exon

LOC117723914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723914
product: vomeronasal type-2 receptor 116-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_034523500.1
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,146867..146887)
location: region:132093-146887:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:146867-146887:1:exon

position:146887:1
position: 146887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146867-146887:1:exon

position:146867:1
position: 146867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723914
product: vomeronasal type-2 receptor 116-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_034523501.1
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,146870..146887)
location: region:132093-146887:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:146870-146887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146870-146887:1:exon

position:146870:1
position: 146870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X4
translation: MKKLHAFSISLLLLKVSLIMCSLTDLSCFWRINNSEDHDRDLQSDCGFVLWLNEEPIEKRVYKEFADFRIPARRYEFFLVMFFATEEINKNPYLLPNMSLIFTMFLALCDDTLELLDKVYSEQKKCLKFMNYNCDIMPNCDVELTGPSWKASLKLTTYSKTTKVFFGPFNPNLSDHDQFPYIHQVATKDTHLSDGMVSLMLHFRWNWIGLVISDNDQSIQFLSDLREEMQMYEICLAFVNMIPETMQMYMTRAKIYDKQIMTSSAKVVIIYGEMNSTVEISFRRWGYLCAQRIWITTSQWDVIINKKDFTLDFFHGTVTFAHHHSEITVFRNFMETMNTTIYPVNISDSILVWNYFNCSISKNSNKMDHFTFNNTLEWLALHKYDIVLSEEGYNLYNAVYAVAHTYHELMLQQVESQKMAKPKGVFTDCQQQIWNSV
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,146867..146887)
location: region:132093-146887:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:146867-146887:1:exon

XP_034379391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146867-146887:1:exon

LOC117723914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X5
translation: MKKLHAFSISLLLLKVSLIMCSLTDLSCFWRINNSEDHDRDLQSDCGFVLWLNEEPIEKRVYKEFADFRIPARRYEFFLVMFFATEEINKNPYLLPNMSLIFTMFLALCDDTLELLDKVYSEQKKCLKFMNYNCDIMPNCDVELTGPSWKASLKLTTYSKTTKVFFGPFNPNLSDHDQFPYIHQVATKDTHLSDGMVSLMLHFRWNWIGLVISDNDQSIQFLSDLREEMQMYEICLAFVNMIPETMQMYMTRAKIYDKQIMTSSAKVVIIYGEMNSTVEISFRRWGYLCAQRIWITTSQWDVIINKKDFTLDFFHGTVTFAHHHSEITVFRNFMETMNTTIYPVNISDSILVWNYFNCSISKNSNKMDHFTFNNTLEWLALHKYDIVLSEEGYNLYNAVYAVAHTYHELMLQQVESQKMAKPKGVFTDCQQIWNSV
SIO_010081: LOC117723914
subclass of: SO_0000673
so part of: LOC117723914
location: join(132093..132298,141729..142011,142454..143257,146870..146887)
location: region:132093-146887:1
so has part: feature:132093-132298:1:exon
so has part: feature:141729-142011:1:exon
so has part: feature:142454-143257:1:exon
so has part: feature:146870-146887:1:exon

XP_034379392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:132093-132298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:141729-142011:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142454-143257:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146870-146887:1:exon

LOC117724028
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 213597..234605
location: region:213597-234605:1
so has part: feature:213597-234605:1:exon

117724028
type: Gene
SIO_000068: ncbigene

position:213597:1
position: 213597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234605:1
position: 234605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213597-234605:1:exon

LOC117724028
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117724028
subclass of: SO_0000673
so part of: LOC117724028
location: 213597..213802
location: region:213597-213802:1
so has part: feature:213597-213802:1:exon

position:213802:1
position: 213802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213597-213802:1:exon

LOC117724028
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117724028
subclass of: SO_0000673
so part of: LOC117724028
location: 215708..215722
location: region:215708-215722:1
so has part: feature:215708-215722:1:exon

position:215708:1
position: 215708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215722:1
position: 215722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215708-215722:1:exon

LOC117724028
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117724028
subclass of: SO_0000673
so part of: LOC117724028
location: 229154..229427
location: region:229154-229427:1
so has part: feature:229154-229427:1:exon

position:229154:1
position: 229154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229427:1
position: 229427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229154-229427:1:exon

LOC117724028
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117724028
subclass of: SO_0000673
so part of: LOC117724028
location: 229773..230578
location: region:229773-230578:1
so has part: feature:229773-230578:1:exon

position:229773:1
position: 229773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230578:1
position: 230578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229773-230578:1:exon

LOC117724028
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117724028
subclass of: SO_0000673
so part of: LOC117724028
location: 231447..231674
location: region:231447-231674:1
so has part: feature:231447-231674:1:exon

position:231447:1
position: 231447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231674:1
position: 231674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231447-231674:1:exon

LOC117724028
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117724028
subclass of: SO_0000673
so part of: LOC117724028
location: 232348
location: region:232348-232348:1
so has part: feature:232348-232348:1:exon

position:232348:1
position: 232348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232348-232348:1:exon

LOC117724028
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117724028
subclass of: SO_0000673
so part of: LOC117724028
location: 233830..234605
location: region:233830-234605:1
so has part: feature:233830-234605:1:exon

position:233830:1
position: 233830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233830-234605:1:exon

LOC117723689
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 256124..258947
location: region:256124-258947:1
so has part: feature:256124-258947:1:exon

117723689
type: Gene
SIO_000068: ncbigene

position:256124:1
position: 256124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258947:1
position: 258947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256124-258947:1:exon

LOC117723689
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723689
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117723689
subclass of: SO_0000673
so part of: LOC117723689
location: 256124..256150
location: region:256124-256150:1
so has part: feature:256124-256150:1:exon

position:256150:1
position: 256150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256124-256150:1:exon

LOC117723689
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723689
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117723689
subclass of: SO_0000673
so part of: LOC117723689
location: 257400..257871
location: region:257400-257871:1
so has part: feature:257400-257871:1:exon

position:257400:1
position: 257400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:257871:1
position: 257871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257400-257871:1:exon

LOC117723689
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723689
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117723689
subclass of: SO_0000673
so part of: LOC117723689
location: 258306..258947
location: region:258306-258947:1
so has part: feature:258306-258947:1:exon

position:258306:1
position: 258306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258306-258947:1:exon

LOC117723880
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 275927..307986
location: region:275927-307986:1
so has part: feature:275927-307986:1:exon
subclass of: SO_0000010

117723880
type: Gene
SIO_000068: ncbigene

position:275927:1
position: 275927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307986:1
position: 307986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275927-307986:1:exon

LOC117723880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723880
product: vomeronasal type-2 receptor 116-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
transcript id: XM_034523460.1
SIO_010081: LOC117723880
subclass of: SO_0000673
so part of: LOC117723880
location: join(275927..276132,287129..287411,287811..288614,289461..289685,290928..291051,300904..300906,307082..307986)
location: region:275927-307986:1
so has part: feature:275927-276132:1:exon
so has part: feature:287129-287411:1:exon
so has part: feature:287811-288614:1:exon
so has part: feature:289461-289685:1:exon
so has part: feature:290928-291051:1:exon
so has part: feature:300904-300906:1:exon
so has part: feature:307082-307986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275927-276132:1:exon

position:276132:1
position: 276132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287129-287411:1:exon

position:287129:1
position: 287129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287411:1
position: 287411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287811-288614:1:exon

position:287811:1
position: 287811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288614:1
position: 288614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289461-289685:1:exon

position:289461:1
position: 289461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289685:1
position: 289685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290928-291051:1:exon

position:290928:1
position: 290928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291051:1
position: 291051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:300904-300906:1:exon

position:300904:1
position: 300904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300906:1
position: 300906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:307082-307986:1:exon

position:307082:1
position: 307082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like
translation: MKKLHVFTISFLLLKVSLIMCSLTDLNCFWRIKNSEDDDGDLRTDCGFVLWLNEEPIEHDFYKKMINFRIPARRYEFFLVMFFATEEINKNPYLLPNMSLIFTIVVGLCEDTLGLLDKLYSQQSYHFNFINYICGLEPSCDVDLIGPSWKTSLKLSNYRKTAKVFFGPFNPNLSDHDQFSYVHQIATKDTHLSDGMVSLMLHFRWNWIGLVISDDDQGIQFLSDLREEMQMYEICLAFVNIIPENLQIYMTRAKIYDKQIMTSSAKVVIIYAEMNSTVEISFRRWRYLGAQRIWITTSQWDVIINKKDFTLDFFHGTVTFAHHHSEITIFRDFMETMNTTIYPVNISESILGWNYFNCSISKNSNKMDHFTFNDTLEWLALHKYDMVLSNEGSNLYNAVYAVAHTYHELILQQVESQKMAEPKGIFFDCQQVASVLKTRVFTNPVGELVNMKQRENQCAEYDIFIIWNFPQGLGLKVKIGSYFPCLPQSQQLRISEDLEWATGGTSVPSSMCSVTCTAGFRKIHQKETADCCFDCVQCPENEVSNETADMEQCVKCPDDKYANIEQTHCIQRVVSFLAYEDPLGMSLGCMALCFSAITVLVLVTFVKHKDTPIVKANNCILSYILLISLIFCFLCSLVFIGHPNQVTCILQQTTFGVFFTVAVSTVLAKTITVVMAFKLTTPGRRMRGMLASGAPNLVIPICTLIQLVLSGTWLVTSPPFIDRDIQSEHGKTIIICNKGSVIAFHFVLGYLGSLALGSFTVAFLARNLPDRFNEAKFLTFSMLMFCSVWITFLPVYHSTRGKVMVVVEVFSILASSAGLLGCIFVPKCYVILVRPDLNFVQKYKDKLLD
SIO_010081: LOC117723880
subclass of: SO_0000673
so part of: LOC117723880
location: join(275927..276132,287129..287411,287811..288614,289461..289685,290928..291051,300904..300906,307082..307986)
location: region:275927-307986:1
so has part: feature:275927-276132:1:exon
so has part: feature:287129-287411:1:exon
so has part: feature:287811-288614:1:exon
so has part: feature:289461-289685:1:exon
so has part: feature:290928-291051:1:exon
so has part: feature:300904-300906:1:exon
so has part: feature:307082-307986:1:exon

XP_034379351.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:275927-276132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287129-287411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287811-288614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289461-289685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290928-291051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:300904-300906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307082-307986:1:exon

LOC117723881
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(285374..286056)
location: region:285374-286056:-1
so has part: feature:285374-286056:-1:exon

117723881
type: Gene
SIO_000068: ncbigene

position:285374:-1
position: 285374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286056:-1
position: 286056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285374-286056:-1:exon

LOC117723881
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723881
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723881
subclass of: SO_0000673
so part of: LOC117723881
location: complement(285374..286056)
location: region:285374-286056:-1
so has part: feature:285374-286056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285374-286056:-1:exon

LOC117723674
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723674
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(286053..286440)
location: region:286053-286440:-1
so has part: feature:286053-286440:-1:exon

117723674
type: Gene
SIO_000068: ncbigene

position:286053:-1
position: 286053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286440:-1
position: 286440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286053-286440:-1:exon

LOC117723674
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: LOC117723674
product: uncharacterized LOC117723674
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 40% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_004608735.1
SIO_010081: LOC117723674
so part of: LOC117723674
location: complement(286053..286440)
location: region:286053-286440:-1
so has part: feature:286053-286440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286053-286440:-1:exon

LOC117723690
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(325898..354700)
location: region:325898-354700:-1
so has part: feature:325898-354700:-1:exon
subclass of: SO_0000010

117723690
type: Gene
SIO_000068: ncbigene

position:325898:-1
position: 325898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354700:-1
position: 354700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325898-354700:-1:exon

LOC117723690
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723690
product: zinc finger protein 120-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_034523243.1
SIO_010081: LOC117723690
subclass of: SO_0000673
so part of: LOC117723690
location: complement(join(325898..326936,328072..328132,328331..328457,330279..330413,354545..354700))
location: region:325898-354700:-1
so has part: feature:354545-354700:-1:exon
so has part: feature:330279-330413:-1:exon
so has part: feature:328331-328457:-1:exon
so has part: feature:328072-328132:-1:exon
so has part: feature:325898-326936:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354545-354700:-1:exon

position:354545:-1
position: 354545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:330279-330413:-1:exon

position:330279:-1
position: 330279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330413:-1
position: 330413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:328331-328457:-1:exon

position:328331:-1
position: 328331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328457:-1
position: 328457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328072-328132:-1:exon

position:328072:-1
position: 328072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328132:-1
position: 328132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:325898-326936:-1:exon

position:326936:-1
position: 326936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117723690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723690
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 120-like
translation: MTKLGAPDASIPLILLPGVVSLKAMTTVIVLANTVETATVKNTPNVVCCRMQRNVKNIRNEMAKVIESCTWSLAGCSHRTWKIGVFTVMQPEEVEDTDAVTFDDVHITFTGEEWNLLDPSQKNLYKDVMLETYWNLTDIGYNWEDHHIEKEFKRSRRHKRHISHSGEKPYEYNQCGEAFAQPSRLRNYKRNHTGEKPYECNQCGKAFARPSHLQRHKRIHTGEKPYECNQCGKVFALHNHLQNHKRIHTGEKPYECNQCGKAFSHQSSLQYHKKTHNGEKPYECNQCGKAFLCQSSLQCHKRTHTGEKPYECNQCGKAFAIPSVLQRHKTTHTGEKPYECNQCGKAYSQERALQYHKRTHTGEKPYECSQCDKAFARPTHLQLHKRTHTGEKPYECNQCGKAFARPSHLQRHKSIHTGEKPYECNQCGKTFSQLTTLQYHKRTHTGEKPYECNQCSKAFACHSHLQRHKRTHTGEKPHGCNQCGKAFSQRSTLQYHKRTHTGDKP
SIO_010081: LOC117723690
subclass of: SO_0000673
so part of: LOC117723690
location: complement(join(325898..326936,328072..328132,328331..328457,330279..330413,354545..354700))
location: region:325898-354700:-1
so has part: feature:354545-354700:-1:exon
so has part: feature:330279-330413:-1:exon
so has part: feature:328331-328457:-1:exon
so has part: feature:328072-328132:-1:exon
so has part: feature:325898-326936:-1:exon

XP_034379134.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:354545-354700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:330279-330413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328331-328457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:328072-328132:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:325898-326936:-1:exon

LOC117723691
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723691
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(373075..400380)
location: region:373075-400380:-1
so has part: feature:373075-400380:-1:exon
subclass of: SO_0000010

117723691
type: Gene
SIO_000068: ncbigene

position:373075:-1
position: 373075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400380:-1
position: 400380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373075-400380:-1:exon

LOC117723691
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723691
product: zinc finger protein 120-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_034523244.1
SIO_010081: LOC117723691
subclass of: SO_0000673
so part of: LOC117723691
location: complement(join(373075..374113,375270..375332,375524..375659,400063..400380))
location: region:373075-400380:-1
so has part: feature:400063-400380:-1:exon
so has part: feature:375524-375659:-1:exon
so has part: feature:375270-375332:-1:exon
so has part: feature:373075-374113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400063-400380:-1:exon

position:400063:-1
position: 400063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:375524-375659:-1:exon

position:375524:-1
position: 375524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375659:-1
position: 375659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:375270-375332:-1:exon

position:375270:-1
position: 375270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375332:-1
position: 375332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:373075-374113:-1:exon

position:374113:-1
position: 374113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117723691
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723691
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 120-like
translation: MWPAADRAAPPLPVVVAHAVREPPQPLAAAAARPGRPRTWARHRRCRCRSGRGRAWQRRSLAPTGPATHRRHRLYAAWTPSLLSAITDCVNFHRCCRLSTPAAHHMDAVTFDDVHITFTGEEWNLLDPSQKNLYKDVMLETYWNLTDIGKTGYNWEDHHIEKNLNVSRRHKRHISHSGEKPYEYNQCGEAFAQPSRLRNYKRNHTGEKPYECNQCGKAFARPSHLQRHKRIHTGEKPYECNQCGKVFALHNHLQNHKRIHTGEKPYECNQCGKAFSHQSSLQYHKKTHNGEKPYECNQCGKAFLCQSSLQCHKRTHTGEKPYECNQCGKAFAIPSVLQRHKTTHTGEKPYECNQCGKAYSQERALQYHKRTHTGEKPYECSQCDKAFARPTHLQLHKRTHTGEKPYECNQCGKAFARPSHLQRHKSIHTGEKPYECNQCGKTFSQLTTLQYHKRTHTGEKPYECNQCSKAFACHSHLQRHKRTHTGEKPHGCNQCGKAFSQRSTLQYHKRTHTGDKP
SIO_010081: LOC117723691
subclass of: SO_0000673
so part of: LOC117723691
location: complement(join(373075..374113,375270..375332,375524..375659,400063..400380))
location: region:373075-400380:-1
so has part: feature:400063-400380:-1:exon
so has part: feature:375524-375659:-1:exon
so has part: feature:375270-375332:-1:exon
so has part: feature:373075-374113:-1:exon

XP_034379135.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:400063-400380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:375524-375659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:375270-375332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373075-374113:-1:exon

LOC117723692
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 442987..>454246
location: region:442987-454246:1
so has part: feature:442987-454246:1:exon
subclass of: SO_0000010

117723692
type: Gene
SIO_000068: ncbigene

position:442987:1
position: 442987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454246:1
position: 454246
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442987-454246:1:exon

LOC117723692
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723692
product: zinc finger protein 431-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034523245.1
SIO_010081: LOC117723692
subclass of: SO_0000673
so part of: LOC117723692
location: join(442987..443074,452403..452529,452749..452809,453961..>454246)
location: region:442987-454246:1
so has part: feature:442987-443074:1:exon
so has part: feature:452403-452529:1:exon
so has part: feature:452749-452809:1:exon
so has part: feature:453961-454246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442987-443074:1:exon

position:443074:1
position: 443074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:452403-452529:1:exon

position:452403:1
position: 452403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452529:1
position: 452529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:452749-452809:1:exon

position:452749:1
position: 452749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452809:1
position: 452809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:453961-454246:1:exon

position:453961:1
position: 453961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723692
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 431-like
translation: MDAVTFDDVHVNFTEKEWNLLDPSQKNLYEDVMLETYRNLTDIGYNWEDHHIEKEFQHSRRHKRHVRSHSEEKPYECDQRGKASTRPSHLQYHKIIHTGEKPHKCNQCGKAFGRHSDLQIHQKTHTGEKPYECNQCGKAYSHQTTLKYHQRRHTGEKPY
SIO_010081: LOC117723692
subclass of: SO_0000673
so part of: LOC117723692
location: join(443072..443074,452403..452529,452749..452809,453961..>454246)
location: region:443072-454246:1
so has part: feature:443072-443074:1:exon
so has part: feature:452403-452529:1:exon
so has part: feature:452749-452809:1:exon
so has part: feature:453961-454246:1:exon

XP_034379136.1
type: Protein
SIO_000068: ncbiprotein

position:443072:1
position: 443072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443072-443074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452403-452529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452749-452809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:453961-454246:1:exon

LOC117724067
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724067
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 462385..462503
location: region:462385-462503:1
so has part: feature:462385-462503:1:exon
subclass of: SO_0000573

117724067
type: Gene
SIO_000068: ncbigene

position:462385:1
position: 462385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462503:1
position: 462503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462385-462503:1:exon

LOC117724067
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 61156
gene: LOC117724067
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608757.1
SIO_010081: LOC117724067
subclass of: SO_0000673
so part of: LOC117724067
location: 462385..462503
location: region:462385-462503:1
so has part: feature:462385-462503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462385-462503:1:exon

LOC117723694
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723694
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(480686..481244)
location: region:480686-481244:-1
so has part: feature:480686-481244:-1:exon

117723694
type: Gene
SIO_000068: ncbigene

position:480686:-1
position: 480686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481244:-1
position: 481244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480686-481244:-1:exon

LOC117723694
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723694
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117723694
subclass of: SO_0000673
so part of: LOC117723694
location: complement(480686..481244)
location: region:480686-481244:-1
so has part: feature:480686-481244:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:480686-481244:-1:exon

LOC117723919
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(490763..539363)
location: region:490763-539363:-1
so has part: feature:490763-539363:-1:exon
subclass of: SO_0000010

117723919
type: Gene
SIO_000068: ncbigene

position:490763:-1
position: 490763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539363:-1
position: 539363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490763-539363:-1:exon

LOC117723919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723919
product: vomeronasal type-2 receptor 116-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_034523509.1
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492770,494076..494299,495338..496141,496569..496851,539158..539363))
location: region:490763-539363:-1
so has part: feature:539158-539363:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494076-494299:-1:exon
so has part: feature:492640-492770:-1:exon
so has part: feature:490763-491646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539158-539363:-1:exon

position:539158:-1
position: 539158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

position:496569:-1
position: 496569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496851:-1
position: 496851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

position:495338:-1
position: 495338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496141:-1
position: 496141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:494076-494299:-1:exon

position:494076:-1
position: 494076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:494299:-1
position: 494299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492770:-1:exon

position:492640:-1
position: 492640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492770:-1
position: 492770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

position:491646:-1
position: 491646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117723919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723919
product: vomeronasal type-2 receptor 116-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_034523514.1
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492763,494075..494299,495338..496141,496569..496851,539158..539363))
location: region:490763-539363:-1
so has part: feature:539158-539363:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494075-494299:-1:exon
so has part: feature:492640-492763:-1:exon
so has part: feature:490763-491646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539158-539363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494075-494299:-1:exon

position:494075:-1
position: 494075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492763:-1:exon

position:492763:-1
position: 492763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

LOC117723919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723919
product: vomeronasal type-2 receptor 116-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_034523510.1
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491649,492640..492763,494075..494299,495338..496141,496569..496851,539158..539363))
location: region:490763-539363:-1
so has part: feature:539158-539363:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494075-494299:-1:exon
so has part: feature:492640-492763:-1:exon
so has part: feature:490763-491649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539158-539363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494075-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491649:-1:exon

position:491649:-1
position: 491649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117723919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723919
product: vomeronasal type-2 receptor 116-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_034523511.1
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492762,494071..494299,495338..496141,496569..496851,539158..539363))
location: region:490763-539363:-1
so has part: feature:539158-539363:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494071-494299:-1:exon
so has part: feature:492640-492762:-1:exon
so has part: feature:490763-491646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:539158-539363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494071-494299:-1:exon

position:494071:-1
position: 494071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492762:-1:exon

position:492762:-1
position: 492762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

LOC117723919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X1
translation: MKRLCVFTNSFSLLKFSLLMCSLTDPSWFWRIKNSEDNDEGLRSDCGFVLLIIEEPIEDNFYNEITNFRLSARKYEFPLVMIFATEEINKNPYLLPNMTFMFIIISGICEDILGGLNEEYSQLNDSLNFINYVCGLEPVCDVDLTGPSWKTSLKQGIYSRRPQIFFGPFNSNLKDHEQLPYVHQVATKDTHLSHGMVFLMLHFRWTWIGLVIPDDDQGIQFLSDMREEMQRNGICLAFVNVIPESMHIYMTRAKIYDKQIMTSTARVVIIYGEMNSTLEVSFRRWGYLGARRLWITTSQWDVVTNKKDFTLDFFHGTVTFAHHKGEIAKFRNFMQTMNTDKYPVSISDSVLGWNYFNCSISKNSNKMDPFTFVNTLEWTTLHKYDMVLSDEGYNLYNAIYAVAHTYHELILQQVESQKMAESYILFTDCLQMTSLLKTRVFTNPVGELVNMNDRENQCTEYDIFIIWDFPQGFGLKVKIGSYFPCFPQSQQLHISEDLEWATGGTSPQFPSSVCSVTCTAGFRKIHQKETEDCCFDCVQCPENEVSNETDMEQCVRCPDDKYANLQQTHCLQRAVSFLAYEDPVGMALACMALSFSAITILVLVIFVKHKDTPIVKANNRILSYILLISLIFCFLCSLLFIGQPYQATCILQQTMFGVFFTMAISTVLAKTITVVMAFKLITPGRKMRGIMITAAPKLVIFICTLIQLVICGIWLVTSPPFIDRDIQSEHGKTIIVCNKGSVIAFHFVLGYLGSLALGSFIVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHSTRGKIMVAVEVFSILASSAGLLGCIFVQKCYIILFSPDSNFLQN
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492770,494076..494299,495338..496141,496569..496851,539158..539363))
location: region:490763-539363:-1
so has part: feature:539158-539363:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494076-494299:-1:exon
so has part: feature:492640-492770:-1:exon
so has part: feature:490763-491646:-1:exon

XP_034379400.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539158-539363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494076-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

LOC117723919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X6
translation: MKRLCVFTNSFSLLKFSLLMCSLTDPSWFWRIKNSEDNDEGLRSDCGFVLLIIEEPIEDNFYNEITNFRLSARKYEFPLVMIFATEEINKNPYLLPNMTFMFIIISGICEDILGGLNEEYSQLNDSLNFINYVCGLEPVCDVDLTGPSWKTSLKQGIYSRRPQIFFGPFNSNLKDHEQLPYVHQVATKDTHLSHGMVFLMLHFRWTWIGLVIPDDDQGIQFLSDMREEMQRNGICLAFVNVIPESMHIYMTRAKIYDKQIMTSTARVVIIYGEMNSTLEVSFRRWGYLGARRLWITTSQWDVVTNKKDFTLDFFHGTVTFAHHKGEIAKFRNFMQTMNTDKYPVSISDSVLGWNYFNCSISKNSNKMDPFTFVNTLEWTTLHKYDMVLSDEGYNLYNAIYAVAHTYHELILQQVESQKMAESYILFTDCLQMTSLLKTRVFTNPVGELVNMNDRENQCTEYDIFIIWDFPQGFGLKVKIGSYFPCFPQSQQLHISEDLEWATGGTSFPSSVCSVTCTAGFRKIHQKETEDCCFDCVQCPENEVSNETDMEQCVRCPDDKYANLQQTHCLQRAVSFLAYEDPVGMALACMALSFSAITILVLVIFVKHKDTPIVKANNRILSYILLISLIFCFLCSLLFIGQPYQATCILQQTMFGVFFTMAISTVLAKTITVVMAFKLITPGRKMRGIMITAAPKLVIFICTLIQLVICGIWLVTSPPFIDRDIQSEHGKTIIVCNKGSVIAFHFVLGYLGSLALGSFIVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHSTRGKIMVAVEVFSILASSAGLLGCIFVQKCYIILFSPDSNFLQN
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492763,494075..494299,495338..496141,496569..496851,539158..539363))
location: region:490763-539363:-1
so has part: feature:539158-539363:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494075-494299:-1:exon
so has part: feature:492640-492763:-1:exon
so has part: feature:490763-491646:-1:exon

XP_034379405.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539158-539363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494075-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

LOC117723919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X2
translation: MKRLCVFTNSFSLLKFSLLMCSLTDPSWFWRIKNSEDNDEGLRSDCGFVLLIIEEPIEDNFYNEITNFRLSARKYEFPLVMIFATEEINKNPYLLPNMTFMFIIISGICEDILGGLNEEYSQLNDSLNFINYVCGLEPVCDVDLTGPSWKTSLKQGIYSRRPQIFFGPFNSNLKDHEQLPYVHQVATKDTHLSHGMVFLMLHFRWTWIGLVIPDDDQGIQFLSDMREEMQRNGICLAFVNVIPESMHIYMTRAKIYDKQIMTSTARVVIIYGEMNSTLEVSFRRWGYLGARRLWITTSQWDVVTNKKDFTLDFFHGTVTFAHHKGEIAKFRNFMQTMNTDKYPVSISDSVLGWNYFNCSISKNSNKMDPFTFVNTLEWTTLHKYDMVLSDEGYNLYNAIYAVAHTYHELILQQVESQKMAESYILFTDCLQMTSLLKTRVFTNPVGELVNMNDRENQCTEYDIFIIWDFPQGFGLKVKIGSYFPCFPQSQQLHISEDLEWATGGTSFPSSVCSVTCTAGFRKIHQKETEDCCFDCVQCPENEVSNETADMEQCVRCPDDKYANLQQTHCLQRAVSFLAYEDPVGMALACMALSFSAITILVLVIFVKHKDTPIVKANNRILSYILLISLIFCFLCSLLFIGQPYQATCILQQTMFGVFFTMAISTVLAKTITVVMAFKLITPGRKMRGIMITAAPKLVIFICTLIQLVICGIWLVTSPPFIDRDIQSEHGKTIIVCNKGSVIAFHFVLGYLGSLALGSFIVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHSTRGKIMVAVEVFSILASSAGLLGCIFVQKCYIILFSPDSNFLQN
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491649,492640..492763,494075..494299,495338..496141,496569..496851,539158..539363))
location: region:490763-539363:-1
so has part: feature:539158-539363:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494075-494299:-1:exon
so has part: feature:492640-492763:-1:exon
so has part: feature:490763-491649:-1:exon

XP_034379401.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539158-539363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494075-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491649:-1:exon

LOC117723919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X3
translation: MKRLCVFTNSFSLLKFSLLMCSLTDPSWFWRIKNSEDNDEGLRSDCGFVLLIIEEPIEDNFYNEITNFRLSARKYEFPLVMIFATEEINKNPYLLPNMTFMFIIISGICEDILGGLNEEYSQLNDSLNFINYVCGLEPVCDVDLTGPSWKTSLKQGIYSRRPQIFFGPFNSNLKDHEQLPYVHQVATKDTHLSHGMVFLMLHFRWTWIGLVIPDDDQGIQFLSDMREEMQRNGICLAFVNVIPESMHIYMTRAKIYDKQIMTSTARVVIIYGEMNSTLEVSFRRWGYLGARRLWITTSQWDVVTNKKDFTLDFFHGTVTFAHHKGEIAKFRNFMQTMNTDKYPVSISDSVLGWNYFNCSISKNSNKMDPFTFVNTLEWTTLHKYDMVLSDEGYNLYNAIYAVAHTYHELILQQVESQKMAESYILFTDCLQMTSLLKTRVFTNPVGELVNMNDRENQCTEYDIFIIWDFPQGFGLKVKIGSYFPCFPQSQQLHISEDLEWATGGTSVVPSSVCSVTCTAGFRKIHQKETEDCCFDCVQCPENEVSNETDMEQCVRCPDDKYANLQQTHCLQRAVSFLAYEDPVGMALACMALSFSAITILVLVIFVKHKDTPIVKANNRILSYILLISLIFCFLCSLLFIGQPYQATCILQQTMFGVFFTMAISTVLAKTITVVMAFKLITPGRKMRGIMITAAPKLVIFICTLIQLVICGIWLVTSPPFIDRDIQSEHGKTIIVCNKGSVIAFHFVLGYLGSLALGSFIVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHSTRGKIMVAVEVFSILASSAGLLGCIFVQKCYIILFSPDSNFLQN
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492762,494071..494299,495338..496141,496569..496851,539158..539363))
location: region:490763-539363:-1
so has part: feature:539158-539363:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494071-494299:-1:exon
so has part: feature:492640-492762:-1:exon
so has part: feature:490763-491646:-1:exon

XP_034379402.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:539158-539363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494071-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

LOC117723919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723919
product: vomeronasal type-2 receptor 116-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_034523512.1
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492770,494076..494299,495338..496141,496569..496851,499456..499658))
location: region:490763-499658:-1
so has part: feature:499456-499658:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494076-494299:-1:exon
so has part: feature:492640-492770:-1:exon
so has part: feature:490763-491646:-1:exon

position:499658:-1
position: 499658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499456-499658:-1:exon

position:499456:-1
position: 499456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494076-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

LOC117723919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723919
product: vomeronasal type-2 receptor 116-like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_034523516.1
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492763,494075..494299,495338..496141,496569..496851,499456..499658))
location: region:490763-499658:-1
so has part: feature:499456-499658:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494075-494299:-1:exon
so has part: feature:492640-492763:-1:exon
so has part: feature:490763-491646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499456-499658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494075-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

LOC117723919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723919
product: vomeronasal type-2 receptor 116-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_034523513.1
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491649,492640..492763,494075..494299,495338..496141,496569..496851,499456..499658))
location: region:490763-499658:-1
so has part: feature:499456-499658:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494075-494299:-1:exon
so has part: feature:492640-492763:-1:exon
so has part: feature:490763-491649:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:499456-499658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494075-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491649:-1:exon

LOC117723919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X4
translation: MKKLRGFTISFLLLKFSLILCCLTELSCFWRTKQSEDNEDLRRDCGFMLSTFKGAFDDNYTGIFGNLRLSARKYEFPLVMIFATEEINKNPYLLPNMTFMFIIISGICEDILGGLNEEYSQLNDSLNFINYVCGLEPVCDVDLTGPSWKTSLKQGIYSRRPQIFFGPFNSNLKDHEQLPYVHQVATKDTHLSHGMVFLMLHFRWTWIGLVIPDDDQGIQFLSDMREEMQRNGICLAFVNVIPESMHIYMTRAKIYDKQIMTSTARVVIIYGEMNSTLEVSFRRWGYLGARRLWITTSQWDVVTNKKDFTLDFFHGTVTFAHHKGEIAKFRNFMQTMNTDKYPVSISDSVLGWNYFNCSISKNSNKMDPFTFVNTLEWTTLHKYDMVLSDEGYNLYNAIYAVAHTYHELILQQVESQKMAESYILFTDCLQMTSLLKTRVFTNPVGELVNMNDRENQCTEYDIFIIWDFPQGFGLKVKIGSYFPCFPQSQQLHISEDLEWATGGTSPQFPSSVCSVTCTAGFRKIHQKETEDCCFDCVQCPENEVSNETDMEQCVRCPDDKYANLQQTHCLQRAVSFLAYEDPVGMALACMALSFSAITILVLVIFVKHKDTPIVKANNRILSYILLISLIFCFLCSLLFIGQPYQATCILQQTMFGVFFTMAISTVLAKTITVVMAFKLITPGRKMRGIMITAAPKLVIFICTLIQLVICGIWLVTSPPFIDRDIQSEHGKTIIVCNKGSVIAFHFVLGYLGSLALGSFIVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHSTRGKIMVAVEVFSILASSAGLLGCIFVQKCYIILFSPDSNFLQN
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492770,494076..494299,495338..496141,496569..496851,499456..499658))
location: region:490763-499658:-1
so has part: feature:499456-499658:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494076-494299:-1:exon
so has part: feature:492640-492770:-1:exon
so has part: feature:490763-491646:-1:exon

XP_034379403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499456-499658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494076-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492770:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

LOC117723919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X7
translation: MKKLRGFTISFLLLKFSLILCCLTELSCFWRTKQSEDNEDLRRDCGFMLSTFKGAFDDNYTGIFGNLRLSARKYEFPLVMIFATEEINKNPYLLPNMTFMFIIISGICEDILGGLNEEYSQLNDSLNFINYVCGLEPVCDVDLTGPSWKTSLKQGIYSRRPQIFFGPFNSNLKDHEQLPYVHQVATKDTHLSHGMVFLMLHFRWTWIGLVIPDDDQGIQFLSDMREEMQRNGICLAFVNVIPESMHIYMTRAKIYDKQIMTSTARVVIIYGEMNSTLEVSFRRWGYLGARRLWITTSQWDVVTNKKDFTLDFFHGTVTFAHHKGEIAKFRNFMQTMNTDKYPVSISDSVLGWNYFNCSISKNSNKMDPFTFVNTLEWTTLHKYDMVLSDEGYNLYNAIYAVAHTYHELILQQVESQKMAESYILFTDCLQMTSLLKTRVFTNPVGELVNMNDRENQCTEYDIFIIWDFPQGFGLKVKIGSYFPCFPQSQQLHISEDLEWATGGTSFPSSVCSVTCTAGFRKIHQKETEDCCFDCVQCPENEVSNETDMEQCVRCPDDKYANLQQTHCLQRAVSFLAYEDPVGMALACMALSFSAITILVLVIFVKHKDTPIVKANNRILSYILLISLIFCFLCSLLFIGQPYQATCILQQTMFGVFFTMAISTVLAKTITVVMAFKLITPGRKMRGIMITAAPKLVIFICTLIQLVICGIWLVTSPPFIDRDIQSEHGKTIIVCNKGSVIAFHFVLGYLGSLALGSFIVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHSTRGKIMVAVEVFSILASSAGLLGCIFVQKCYIILFSPDSNFLQN
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491646,492640..492763,494075..494299,495338..496141,496569..496851,499456..499658))
location: region:490763-499658:-1
so has part: feature:499456-499658:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494075-494299:-1:exon
so has part: feature:492640-492763:-1:exon
so has part: feature:490763-491646:-1:exon

XP_034379407.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499456-499658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494075-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491646:-1:exon

LOC117723919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vomeronasal type-2 receptor 116-like isoform X5
translation: MKKLRGFTISFLLLKFSLILCCLTELSCFWRTKQSEDNEDLRRDCGFMLSTFKGAFDDNYTGIFGNLRLSARKYEFPLVMIFATEEINKNPYLLPNMTFMFIIISGICEDILGGLNEEYSQLNDSLNFINYVCGLEPVCDVDLTGPSWKTSLKQGIYSRRPQIFFGPFNSNLKDHEQLPYVHQVATKDTHLSHGMVFLMLHFRWTWIGLVIPDDDQGIQFLSDMREEMQRNGICLAFVNVIPESMHIYMTRAKIYDKQIMTSTARVVIIYGEMNSTLEVSFRRWGYLGARRLWITTSQWDVVTNKKDFTLDFFHGTVTFAHHKGEIAKFRNFMQTMNTDKYPVSISDSVLGWNYFNCSISKNSNKMDPFTFVNTLEWTTLHKYDMVLSDEGYNLYNAIYAVAHTYHELILQQVESQKMAESYILFTDCLQMTSLLKTRVFTNPVGELVNMNDRENQCTEYDIFIIWDFPQGFGLKVKIGSYFPCFPQSQQLHISEDLEWATGGTSFPSSVCSVTCTAGFRKIHQKETEDCCFDCVQCPENEVSNETADMEQCVRCPDDKYANLQQTHCLQRAVSFLAYEDPVGMALACMALSFSAITILVLVIFVKHKDTPIVKANNRILSYILLISLIFCFLCSLLFIGQPYQATCILQQTMFGVFFTMAISTVLAKTITVVMAFKLITPGRKMRGIMITAAPKLVIFICTLIQLVICGIWLVTSPPFIDRDIQSEHGKTIIVCNKGSVIAFHFVLGYLGSLALGSFIVAFLARNLPDRFNEAKFLTFSMLVFYSVWITFLPVYHSTRGKIMVAVEVFSILASSAGLLGCIFVQKCYIILFSPDSNFLQN
SIO_010081: LOC117723919
subclass of: SO_0000673
so part of: LOC117723919
location: complement(join(490763..491649,492640..492763,494075..494299,495338..496141,496569..496851,499456..499658))
location: region:490763-499658:-1
so has part: feature:499456-499658:-1:exon
so has part: feature:496569-496851:-1:exon
so has part: feature:495338-496141:-1:exon
so has part: feature:494075-494299:-1:exon
so has part: feature:492640-492763:-1:exon
so has part: feature:490763-491649:-1:exon

XP_034379404.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:499456-499658:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496569-496851:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:495338-496141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494075-494299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:492640-492763:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490763-491649:-1:exon

LOC117723695
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 559638..637999
location: region:559638-637999:1
so has part: feature:559638-637999:1:exon

117723695
type: Gene
SIO_000068: ncbigene

position:559638:1
position: 559638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637999:1
position: 637999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559638-637999:1:exon

LOC117723695
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723695
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723695
subclass of: SO_0000673
so part of: LOC117723695
location: 559638..559694
location: region:559638-559694:1
so has part: feature:559638-559694:1:exon

position:559694:1
position: 559694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559638-559694:1:exon

LOC117723695
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723695
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723695
subclass of: SO_0000673
so part of: LOC117723695
location: 574671..574797
location: region:574671-574797:1
so has part: feature:574671-574797:1:exon

position:574671:1
position: 574671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574797:1
position: 574797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574671-574797:1:exon

LOC117723695
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723695
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723695
subclass of: SO_0000673
so part of: LOC117723695
location: 575017..575077
location: region:575017-575077:1
so has part: feature:575017-575077:1:exon

position:575017:1
position: 575017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575077:1
position: 575077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575017-575077:1:exon

LOC117723695
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723695
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723695
subclass of: SO_0000673
so part of: LOC117723695
location: 576131..577357
location: region:576131-577357:1
so has part: feature:576131-577357:1:exon

position:576131:1
position: 576131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577357:1
position: 577357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576131-577357:1:exon

LOC117723695
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723695
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723695
subclass of: SO_0000673
so part of: LOC117723695
location: 636811..637999
location: region:636811-637999:1
so has part: feature:636811-637999:1:exon

position:636811:1
position: 636811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636811-637999:1:exon

LOC117723738
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 645087..663039
location: region:645087-663039:1
so has part: feature:645087-663039:1:exon
subclass of: SO_0000010

117723738
type: Gene
SIO_000068: ncbigene

position:645087:1
position: 645087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663039:1
position: 663039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645087-663039:1:exon

LOC117723738
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723738
product: zinc finger protein 420-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 19 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523268.1
SIO_010081: LOC117723738
subclass of: SO_0000673
so part of: LOC117723738
location: join(645087..645252,652776..653030,656352..656478,656971..657066,659530..663039)
location: region:645087-663039:1
so has part: feature:645087-645252:1:exon
so has part: feature:652776-653030:1:exon
so has part: feature:656352-656478:1:exon
so has part: feature:656971-657066:1:exon
so has part: feature:659530-663039:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:645087-645252:1:exon

position:645252:1
position: 645252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:652776-653030:1:exon

position:652776:1
position: 652776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653030:1
position: 653030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:656352-656478:1:exon

position:656352:1
position: 656352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:656478:1
position: 656478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:656971-657066:1:exon

position:656971:1
position: 656971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657066:1
position: 657066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:659530-663039:1:exon

position:659530:1
position: 659530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723738
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723738
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 420-like
translation: MIYMIESDMERSPEKEEMAGSKGQLSFRDVAIDFSPEECECLEPAQWNLYSDVMLENYSNLVSLGLAFSKPHLVTFLEQRQQSWDVKQQATVATYLGTKPYECKDCNKVFVRNSLLIQHQRVHTGEKPYKCEQCGKAFSCSSSLTPHQRIHSGEKPYKCEQCGQAFNYSSHLYKHQRIHTGEKPYKCTECGKAFNWSSSLTQHQRIHTGEKPYKCEECGLSFNCSSHLYRHQRIHTGEKLYKCKECGKAFNCSSYLNYHQILHTGDKPYKCRECGKAFTMVSYLTRHQRIHTGEKPYKCKECDKAFSNCSALIQHQRIHTGEKPYKCRECGKAFNNSSSLTHHQRIHTGEKPYECKECGKAFNSSSHLNYHHRIHTGEKPYRCEECSKAFSNFSALIQHQRIHTGEKPYKCEKCSKAFNNCSALSQHQRIHTGEKPYKCEKCRQGFNCSSNLKQHQRIHTREKLYNCEDSGKAFNYGEALPQYHRIHMS
SIO_010081: LOC117723738
subclass of: SO_0000673
so part of: LOC117723738
location: join(652965..653030,656352..656478,656971..657066,659530..660710)
location: region:652965-660710:1
so has part: feature:652965-653030:1:exon
so has part: feature:656352-656478:1:exon
so has part: feature:656971-657066:1:exon
so has part: feature:659530-660710:1:exon

XP_034379159.1
type: Protein
SIO_000068: ncbiprotein

position:652965:1
position: 652965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660710:1
position: 660710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652965-653030:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656352-656478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:656971-657066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659530-660710:1:exon

Lrrc14b
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Lrrc14b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 669204..673387
location: region:669204-673387:1
so has part: feature:669204-673387:1:exon
subclass of: SO_0000010

117723908
type: Gene
SIO_000068: ncbigene

position:669204:1
position: 669204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673387:1
position: 673387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669204-673387:1:exon

Lrrc14b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lrrc14b
product: leucine rich repeat containing 14B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523491.1
SIO_010081: Lrrc14b
subclass of: SO_0000673
so part of: Lrrc14b
location: join(669204..670211,671916..673387)
location: region:669204-673387:1
so has part: feature:669204-670211:1:exon
so has part: feature:671916-673387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:669204-670211:1:exon

position:670211:1
position: 670211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671916-673387:1:exon

position:671916:1
position: 671916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Lrrc14b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lrrc14b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 14B
translation: MSSLRFISAEALVSYPQLVQENLDNIAYNLYPLLFKASYLLEQADVTRALLSHWPLEEFRLAVLLRPNTDHPEDLRDRACKACLEACMQGIADHVLKSGSNRLRVADFTGIQDVQVQQCPCGRALGRWGRTKVLARTCCQLQGQPCTAGHPIEVFADLFVTEGNFDMVVQALKPSGPAPLQVCCPSLRADSLSPGQLLQVLGLARPGNLRKLEVVHNVRLHAGHVQQLLTQVGFPQLTSLTLPTKAFDAPPTCAPNPEGEDLLLTSIAWELSQMNQLTELSVAFSTLTGKIQTLLSPLKTPLRVLDLANCALNHEDISFLADCNHTAHLEVLDLSGHNLVHLYPSTFFRLLSQAAQTLRVLTLEECNITDSHVNMMILGLSPCSQLQQFKFLGNPLSGSALRRLFAALCELPQLRHIEFPVPKDCYPEGAVYPQDELSVSKFDQQKYNMIAEDLRAVLLRANREDIQASTPLFGSFDPDIHETSNELGTFLLQAFKAALENFSRALEQME
SIO_010081: Lrrc14b
subclass of: SO_0000673
so part of: Lrrc14b
location: join(669325..670211,671916..672561)
location: region:669325-672561:1
so has part: feature:669325-670211:1:exon
so has part: feature:671916-672561:1:exon

XP_034379382.1
type: Protein
SIO_000068: ncbiprotein

position:669325:1
position: 669325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672561:1
position: 672561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:669325-670211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:671916-672561:1:exon

Ccdc127
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ccdc127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(673708..682752)
location: region:673708-682752:-1
so has part: feature:673708-682752:-1:exon
subclass of: SO_0000010

117723909
type: Gene
SIO_000068: ncbigene

position:673708:-1
position: 673708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682752:-1
position: 682752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673708-682752:-1:exon

Ccdc127
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ccdc127
product: coiled-coil domain containing 127
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523492.1
SIO_010081: Ccdc127
subclass of: SO_0000673
so part of: Ccdc127
location: complement(join(673708..676749,680224..680354,682665..682752))
location: region:673708-682752:-1
so has part: feature:682665-682752:-1:exon
so has part: feature:680224-680354:-1:exon
so has part: feature:673708-676749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:682665-682752:-1:exon

position:682665:-1
position: 682665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:680224-680354:-1:exon

position:680224:-1
position: 680224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680354:-1
position: 680354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:673708-676749:-1:exon

position:676749:-1
position: 676749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ccdc127
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ccdc127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 127
translation: MNNLNDPPNWNIRPNPRADGGDGSKWNYALLVPMLGLAAFRWIWSRESQKEIEKARKVYHQRTAAFQQDLEAKYHAVISEHRRAVAQLSLELEKEQNRTTSFREALISQGRKLAEEKKLLEQERAQIMQEKSQLQPLRSVYLSCLEEEDDWQRRARLMLKEVGEALEERQNIYCSLILPRSARLELEKSLLVRTSVDPVAADLEMAAGLSDIFKHDKHCGDVWNTNKRQNGRLMWMYLKYWELLVELKKFKKVEKVILEK
SIO_010081: Ccdc127
subclass of: SO_0000673
so part of: Ccdc127
location: complement(join(676088..676749,680224..680344))
location: region:676088-680344:-1
so has part: feature:680224-680344:-1:exon
so has part: feature:676088-676749:-1:exon

XP_034379383.1
type: Protein
SIO_000068: ncbiprotein

position:676088:-1
position: 676088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680344:-1
position: 680344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:680224-680344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676088-676749:-1:exon

Sdha
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Sdha
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 682804..708816
location: region:682804-708816:1
so has part: feature:682804-708816:1:exon
subclass of: SO_0000010

117723771
type: Gene
SIO_000068: ncbigene

position:682804:1
position: 682804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708816:1
position: 708816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682804-708816:1:exon

Sdha
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sdha
product: succinate dehydrogenase complex flavoprotein subunit A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 mRNAs, 16 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523328.1
SIO_010081: Sdha
subclass of: SO_0000673
so part of: Sdha
location: join(682804..682927,689048..689134,690404..690565,694270..694413,694955..695119,696831..696979,700513..700637,701793..701961,702691..702886,703562..703733,704196..704314,705285..705396,705586..705716,707066..707179,707828..708816)
location: region:682804-708816:1
so has part: feature:682804-682927:1:exon
so has part: feature:689048-689134:1:exon
so has part: feature:690404-690565:1:exon
so has part: feature:694270-694413:1:exon
so has part: feature:694955-695119:1:exon
so has part: feature:696831-696979:1:exon
so has part: feature:700513-700637:1:exon
so has part: feature:701793-701961:1:exon
so has part: feature:702691-702886:1:exon
so has part: feature:703562-703733:1:exon
so has part: feature:704196-704314:1:exon
so has part: feature:705285-705396:1:exon
so has part: feature:705586-705716:1:exon
so has part: feature:707066-707179:1:exon
so has part: feature:707828-708816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:682804-682927:1:exon

position:682927:1
position: 682927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:689048-689134:1:exon

position:689048:1
position: 689048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689134:1
position: 689134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690404-690565:1:exon

position:690404:1
position: 690404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690565:1
position: 690565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:694270-694413:1:exon

position:694270:1
position: 694270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694413:1
position: 694413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:694955-695119:1:exon

position:694955:1
position: 694955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695119:1
position: 695119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:696831-696979:1:exon

position:696831:1
position: 696831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696979:1
position: 696979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:700513-700637:1:exon

position:700513:1
position: 700513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700637:1
position: 700637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:701793-701961:1:exon

position:701793:1
position: 701793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701961:1
position: 701961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:702691-702886:1:exon

position:702691:1
position: 702691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:702886:1
position: 702886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:703562-703733:1:exon

position:703562:1
position: 703562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703733:1
position: 703733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:704196-704314:1:exon

position:704196:1
position: 704196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704314:1
position: 704314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:705285-705396:1:exon

position:705285:1
position: 705285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705396:1
position: 705396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:705586-705716:1:exon

position:705586:1
position: 705586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705716:1
position: 705716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:707066-707179:1:exon

position:707066:1
position: 707066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707179:1
position: 707179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:707828-708816:1:exon

position:707828:1
position: 707828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sdha
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sdha
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
translation: MAGVGAVSRLLRGRRLALAGAWPGTHQTQTCGFHFSVGESKKASAKVSDAISTQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACLTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPASVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLKHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCRPGDKVPPIKANAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCEKISQLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEYDYSKPIQGQQKRPFGEHWRKHTLSYVDIKTGKVTLEYRPVIDKTLNEADCATVPPAIRSY
SIO_010081: Sdha
subclass of: SO_0000673
so part of: Sdha
location: join(682865..682927,689048..689134,690404..690565,694270..694413,694955..695119,696831..696979,700513..700637,701793..701961,702691..702886,703562..703733,704196..704314,705285..705396,705586..705716,707066..707179,707828..707914)
location: region:682865-707914:1
so has part: feature:682865-682927:1:exon
so has part: feature:689048-689134:1:exon
so has part: feature:690404-690565:1:exon
so has part: feature:694270-694413:1:exon
so has part: feature:694955-695119:1:exon
so has part: feature:696831-696979:1:exon
so has part: feature:700513-700637:1:exon
so has part: feature:701793-701961:1:exon
so has part: feature:702691-702886:1:exon
so has part: feature:703562-703733:1:exon
so has part: feature:704196-704314:1:exon
so has part: feature:705285-705396:1:exon
so has part: feature:705586-705716:1:exon
so has part: feature:707066-707179:1:exon
so has part: feature:707828-707914:1:exon

XP_034379219.1
type: Protein
SIO_000068: ncbiprotein

position:682865:1
position: 682865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707914:1
position: 707914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682865-682927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:689048-689134:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690404-690565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:694270-694413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:694955-695119:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:696831-696979:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:700513-700637:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:701793-701961:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702691-702886:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:703562-703733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:704196-704314:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:705285-705396:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:705586-705716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:707066-707179:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:707828-707914:1:exon

LOC117723773
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(693095..693429)
location: region:693095-693429:-1
so has part: feature:693095-693429:-1:exon

117723773
type: Gene
SIO_000068: ncbigene

position:693095:-1
position: 693095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693429:-1
position: 693429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693095-693429:-1:exon

LOC117723773
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723773
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins
pseudo: true
SIO_010081: LOC117723773
subclass of: SO_0000673
so part of: LOC117723773
location: complement(693095..693429)
location: region:693095-693429:-1
so has part: feature:693095-693429:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693095-693429:-1:exon

Pdcd6
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Pdcd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 713711..727613
location: region:713711-727613:1
so has part: feature:713711-727613:1:exon
subclass of: SO_0000010

117724032
type: Gene
SIO_000068: ncbigene

position:713711:1
position: 713711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727613:1
position: 727613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713711-727613:1:exon

Pdcd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pdcd6
product: programmed cell death 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523663.1
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(713711..713924,714618..714679,718366..718410,719787..719939,723811..723920,727064..727613)
location: region:713711-727613:1
so has part: feature:713711-713924:1:exon
so has part: feature:714618-714679:1:exon
so has part: feature:718366-718410:1:exon
so has part: feature:719787-719939:1:exon
so has part: feature:723811-723920:1:exon
so has part: feature:727064-727613:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:713711-713924:1:exon

position:713924:1
position: 713924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:714618-714679:1:exon

position:714618:1
position: 714618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714679:1
position: 714679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:718366-718410:1:exon

position:718366:1
position: 718366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718410:1
position: 718410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:719787-719939:1:exon

position:719787:1
position: 719787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719939:1
position: 719939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:723811-723920:1:exon

position:723811:1
position: 723811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723920:1
position: 723920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:727064-727613:1:exon

position:727064:1
position: 727064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pdcd6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pdcd6
product: programmed cell death 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523662.1
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(713735..713924,714618..714679,718366..718410,719787..719945,723811..723920,727064..727613)
location: region:713735-727613:1
so has part: feature:713735-713924:1:exon
so has part: feature:714618-714679:1:exon
so has part: feature:718366-718410:1:exon
so has part: feature:719787-719945:1:exon
so has part: feature:723811-723920:1:exon
so has part: feature:727064-727613:1:exon

position:713735:1
position: 713735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713735-713924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714618-714679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718366-718410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719787-719945:1:exon

position:719945:1
position: 719945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:723811-723920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727064-727613:1:exon

Pdcd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pdcd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 6 isoform X1
translation: MAAYSYRPGPGAGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(713824..713924,714618..714679,718366..718410,719787..719945,723811..723920,727064..727162)
location: region:713824-727162:1
so has part: feature:713824-713924:1:exon
so has part: feature:714618-714679:1:exon
so has part: feature:718366-718410:1:exon
so has part: feature:719787-719945:1:exon
so has part: feature:723811-723920:1:exon
so has part: feature:727064-727162:1:exon

XP_034379553.1
type: Protein
SIO_000068: ncbiprotein

position:713824:1
position: 713824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727162:1
position: 727162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713824-713924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714618-714679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718366-718410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719787-719945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723811-723920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727064-727162:1:exon

Pdcd6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pdcd6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 6 isoform X2
translation: MAAYSYRPGPGAGPGPAAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFSIV
SIO_010081: Pdcd6
subclass of: SO_0000673
so part of: Pdcd6
location: join(713824..713924,714618..714679,718366..718410,719787..719939,723811..723920,727064..727162)
location: region:713824-727162:1
so has part: feature:713824-713924:1:exon
so has part: feature:714618-714679:1:exon
so has part: feature:718366-718410:1:exon
so has part: feature:719787-719939:1:exon
so has part: feature:723811-723920:1:exon
so has part: feature:727064-727162:1:exon

XP_034379554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:713824-713924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714618-714679:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718366-718410:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719787-719939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:723811-723920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:727064-727162:1:exon

Ahrr
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ahrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 738407..815276
location: region:738407-815276:1
so has part: feature:738407-815276:1:exon
subclass of: SO_0000010

117723744
type: Gene
SIO_000068: ncbigene

position:738407:1
position: 738407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815276:1
position: 815276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738407-815276:1:exon

Ahrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ahrr
product: aryl-hydrocarbon receptor repressor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523281.1
SIO_010081: Ahrr
subclass of: SO_0000673
so part of: Ahrr
location: join(738407..738469,747137..747209,753104..753285,773863..773960,797298..797387,800678..800807,802450..802583,805747..805943,810821..810882,811115..811253,811941..815276)
location: region:738407-815276:1
so has part: feature:738407-738469:1:exon
so has part: feature:747137-747209:1:exon
so has part: feature:753104-753285:1:exon
so has part: feature:773863-773960:1:exon
so has part: feature:797298-797387:1:exon
so has part: feature:800678-800807:1:exon
so has part: feature:802450-802583:1:exon
so has part: feature:805747-805943:1:exon
so has part: feature:810821-810882:1:exon
so has part: feature:811115-811253:1:exon
so has part: feature:811941-815276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738407-738469:1:exon

position:738469:1
position: 738469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:747137-747209:1:exon

position:747137:1
position: 747137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747209:1
position: 747209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:753104-753285:1:exon

position:753104:1
position: 753104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753285:1
position: 753285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:773863-773960:1:exon

position:773863:1
position: 773863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773960:1
position: 773960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:797298-797387:1:exon

position:797298:1
position: 797298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797387:1
position: 797387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:800678-800807:1:exon

position:800678:1
position: 800678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800807:1
position: 800807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:802450-802583:1:exon

position:802450:1
position: 802450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802583:1
position: 802583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:805747-805943:1:exon

position:805747:1
position: 805747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805943:1
position: 805943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:810821-810882:1:exon

position:810821:1
position: 810821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810882:1
position: 810882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:811115-811253:1:exon

position:811115:1
position: 811115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811253:1
position: 811253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:811941-815276:1:exon

position:811941:1
position: 811941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ahrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ahrr
product: aryl-hydrocarbon receptor repressor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523282.1
SIO_010081: Ahrr
subclass of: SO_0000673
so part of: Ahrr
location: join(745094..745156,747137..747209,753104..753285,773863..773960,797298..797387,800678..800807,802450..802583,805747..805943,810821..810882,811115..811253,811941..815276)
location: region:745094-815276:1
so has part: feature:745094-745156:1:exon
so has part: feature:747137-747209:1:exon
so has part: feature:753104-753285:1:exon
so has part: feature:773863-773960:1:exon
so has part: feature:797298-797387:1:exon
so has part: feature:800678-800807:1:exon
so has part: feature:802450-802583:1:exon
so has part: feature:805747-805943:1:exon
so has part: feature:810821-810882:1:exon
so has part: feature:811115-811253:1:exon
so has part: feature:811941-815276:1:exon

position:745094:1
position: 745094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745094-745156:1:exon

position:745156:1
position: 745156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:747137-747209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753104-753285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773863-773960:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797298-797387:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:800678-800807:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802450-802583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805747-805943:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:810821-810882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:811115-811253:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:811941-815276:1:exon

Ahrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ahrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor repressor isoform X1
translation: MMIPSGECTYAGRKRRKPIQKRRLTMGAEKSNPSKRHRDRLNTELDHLASLLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEDHSYRGFPVQEGRLLLESLNGFALVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSRAKAVTNLCESELHPKLNYLAGRSNGENGISLFRGQTDRSHWARALARSSCLCLRGAPDLLDPKGASGDREEEDQKHILRRSPGARGPREMHKYSYGLETPVHLRHLNWSTEQQSQEGTTKLTRQPSKNEPSTCLVPHGSCVSYPGNQAMFSANNMASFRDSLDHPTGTYCSQMNRPLPDIHQGQVDLSTCHIPQGSLGSRIPLPGMQRFTARGFSTEDAKLPSLPVTIGTPCNPVLSLEVPIKMENESGSQDIVETSTTSCVWLGTSDMARRHLVGFPARMHLKTEPDYRQQVCTPHLGHGMVGTNPHSRDTVGSCREHAPLYSAHCTCLDPEPPHHLFMCSHSESQHPSLDQDCRAPIVKREPLDSPSWAAPGQVTVPRMFPKSASITVIPSKGSDGTFLS
SIO_010081: Ahrr
subclass of: SO_0000673
so part of: Ahrr
location: join(747145..747209,753104..753285,773863..773960,797298..797387,800678..800807,802450..802583,805747..805943,810821..810882,811115..811253,811941..812949)
location: region:747145-812949:1
so has part: feature:747145-747209:1:exon
so has part: feature:753104-753285:1:exon
so has part: feature:773863-773960:1:exon
so has part: feature:797298-797387:1:exon
so has part: feature:800678-800807:1:exon
so has part: feature:802450-802583:1:exon
so has part: feature:805747-805943:1:exon
so has part: feature:810821-810882:1:exon
so has part: feature:811115-811253:1:exon
so has part: feature:811941-812949:1:exon

XP_034379172.1
type: Protein
SIO_000068: ncbiprotein

position:747145:1
position: 747145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812949:1
position: 812949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747145-747209:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753104-753285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773863-773960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797298-797387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:800678-800807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802450-802583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805747-805943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810821-810882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:811115-811253:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:811941-812949:1:exon

Ahrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ahrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor repressor isoform X1
translation: MMIPSGECTYAGRKRRKPIQKRRLTMGAEKSNPSKRHRDRLNTELDHLASLLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQALQETCVWSAPALSPEDHSYRGFPVQEGRLLLESLNGFALVVSAEGMIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSRAKAVTNLCESELHPKLNYLAGRSNGENGISLFRGQTDRSHWARALARSSCLCLRGAPDLLDPKGASGDREEEDQKHILRRSPGARGPREMHKYSYGLETPVHLRHLNWSTEQQSQEGTTKLTRQPSKNEPSTCLVPHGSCVSYPGNQAMFSANNMASFRDSLDHPTGTYCSQMNRPLPDIHQGQVDLSTCHIPQGSLGSRIPLPGMQRFTARGFSTEDAKLPSLPVTIGTPCNPVLSLEVPIKMENESGSQDIVETSTTSCVWLGTSDMARRHLVGFPARMHLKTEPDYRQQVCTPHLGHGMVGTNPHSRDTVGSCREHAPLYSAHCTCLDPEPPHHLFMCSHSESQHPSLDQDCRAPIVKREPLDSPSWAAPGQVTVPRMFPKSASITVIPSKGSDGTFLS
SIO_010081: Ahrr
subclass of: SO_0000673
so part of: Ahrr
location: join(747145..747209,753104..753285,773863..773960,797298..797387,800678..800807,802450..802583,805747..805943,810821..810882,811115..811253,811941..812949)
location: region:747145-812949:1
so has part: feature:747145-747209:1:exon
so has part: feature:753104-753285:1:exon
so has part: feature:773863-773960:1:exon
so has part: feature:797298-797387:1:exon
so has part: feature:800678-800807:1:exon
so has part: feature:802450-802583:1:exon
so has part: feature:805747-805943:1:exon
so has part: feature:810821-810882:1:exon
so has part: feature:811115-811253:1:exon
so has part: feature:811941-812949:1:exon

XP_034379173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:747145-747209:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753104-753285:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773863-773960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:797298-797387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:800678-800807:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802450-802583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805747-805943:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810821-810882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:811115-811253:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:811941-812949:1:exon

Ahrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ahrr
product: aryl-hydrocarbon receptor repressor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523283.1
SIO_010081: Ahrr
subclass of: SO_0000673
so part of: Ahrr
location: join(769752..769776,773863..773960,797298..797387,800678..800807,802450..802583,805747..805943,810821..810882,811115..811253,811941..815276)
location: region:769752-815276:1
so has part: feature:769752-769776:1:exon
so has part: feature:773863-773960:1:exon
so has part: feature:797298-797387:1:exon
so has part: feature:800678-800807:1:exon
so has part: feature:802450-802583:1:exon
so has part: feature:805747-805943:1:exon
so has part: feature:810821-810882:1:exon
so has part: feature:811115-811253:1:exon
so has part: feature:811941-815276:1:exon

position:769752:1
position: 769752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769752-769776:1:exon

position:769776:1
position: 769776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:773863-773960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:797298-797387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:800678-800807:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:802450-802583:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805747-805943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810821-810882:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:811115-811253:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:811941-815276:1:exon

Ahrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ahrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl hydrocarbon receptor repressor isoform X2
translation: MIFYASATIVDYLGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFLTRCFICRVRCLLDSTSGFLTMQFQGKLKFLFGQKKKTPSGTALPPRLSLFCIVAPVLPSVTEMKMKSTFLKAKHRADIVVTMDSRAKAVTNLCESELHPKLNYLAGRSNGENGISLFRGQTDRSHWARALARSSCLCLRGAPDLLDPKGASGDREEEDQKHILRRSPGARGPREMHKYSYGLETPVHLRHLNWSTEQQSQEGTTKLTRQPSKNEPSTCLVPHGSCVSYPGNQAMFSANNMASFRDSLDHPTGTYCSQMNRPLPDIHQGQVDLSTCHIPQGSLGSRIPLPGMQRFTARGFSTEDAKLPSLPVTIGTPCNPVLSLEVPIKMENESGSQDIVETSTTSCVWLGTSDMARRHLVGFPARMHLKTEPDYRQQVCTPHLGHGMVGTNPHSRDTVGSCREHAPLYSAHCTCLDPEPPHHLFMCSHSESQHPSLDQDCRAPIVKREPLDSPSWAAPGQVTVPRMFPKSASITVIPSKGSDGTFLS
SIO_010081: Ahrr
subclass of: SO_0000673
so part of: Ahrr
location: join(797337..797387,800678..800807,802450..802583,805747..805943,810821..810882,811115..811253,811941..812949)
location: region:797337-812949:1
so has part: feature:797337-797387:1:exon
so has part: feature:800678-800807:1:exon
so has part: feature:802450-802583:1:exon
so has part: feature:805747-805943:1:exon
so has part: feature:810821-810882:1:exon
so has part: feature:811115-811253:1:exon
so has part: feature:811941-812949:1:exon

XP_034379174.1
type: Protein
SIO_000068: ncbiprotein

position:797337:1
position: 797337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797337-797387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800678-800807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:802450-802583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805747-805943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:810821-810882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:811115-811253:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:811941-812949:1:exon

Exoc3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Exoc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 817883..853814
location: region:817883-853814:1
so has part: feature:817883-853814:1:exon
subclass of: SO_0000010

117723758
type: Gene
SIO_000068: ncbigene

position:817883:1
position: 817883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853814:1
position: 853814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817883-853814:1:exon

Exoc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Exoc3
product: exocyst complex component 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523302.1
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(817883..817918,819428..819618,827223..827442,833854..834535,837060..837177,837950..838075,841154..841254,842832..842942,843025..843175,844913..845035,849037..849198,849825..849952,850854..853814)
location: region:817883-853814:1
so has part: feature:817883-817918:1:exon
so has part: feature:819428-819618:1:exon
so has part: feature:827223-827442:1:exon
so has part: feature:833854-834535:1:exon
so has part: feature:837060-837177:1:exon
so has part: feature:837950-838075:1:exon
so has part: feature:841154-841254:1:exon
so has part: feature:842832-842942:1:exon
so has part: feature:843025-843175:1:exon
so has part: feature:844913-845035:1:exon
so has part: feature:849037-849198:1:exon
so has part: feature:849825-849952:1:exon
so has part: feature:850854-853814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817883-817918:1:exon

position:817918:1
position: 817918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:819428-819618:1:exon

position:819428:1
position: 819428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819618:1
position: 819618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:827223-827442:1:exon

position:827223:1
position: 827223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827442:1
position: 827442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:833854-834535:1:exon

position:833854:1
position: 833854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834535:1
position: 834535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:837060-837177:1:exon

position:837060:1
position: 837060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837177:1
position: 837177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:837950-838075:1:exon

position:837950:1
position: 837950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838075:1
position: 838075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:841154-841254:1:exon

position:841154:1
position: 841154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841254:1
position: 841254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:842832-842942:1:exon

position:842832:1
position: 842832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:842942:1
position: 842942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:843025-843175:1:exon

position:843025:1
position: 843025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843175:1
position: 843175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:844913-845035:1:exon

position:844913:1
position: 844913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845035:1
position: 845035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:849037-849198:1:exon

position:849037:1
position: 849037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849198:1
position: 849198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:849825-849952:1:exon

position:849825:1
position: 849825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:849952:1
position: 849952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:850854-853814:1:exon

position:850854:1
position: 850854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Exoc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Exoc3
product: exocyst complex component 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034523303.1
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(817887..818067,819428..819618,827223..827442,833854..834535,837060..837177,837950..838075,841154..841254,842832..842942,843025..843175,844913..845035,849037..849198,849825..849952,850854..853814)
location: region:817887-853814:1
so has part: feature:817887-818067:1:exon
so has part: feature:819428-819618:1:exon
so has part: feature:827223-827442:1:exon
so has part: feature:833854-834535:1:exon
so has part: feature:837060-837177:1:exon
so has part: feature:837950-838075:1:exon
so has part: feature:841154-841254:1:exon
so has part: feature:842832-842942:1:exon
so has part: feature:843025-843175:1:exon
so has part: feature:844913-845035:1:exon
so has part: feature:849037-849198:1:exon
so has part: feature:849825-849952:1:exon
so has part: feature:850854-853814:1:exon

position:817887:1
position: 817887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817887-818067:1:exon

position:818067:1
position: 818067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:819428-819618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827223-827442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833854-834535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837060-837177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:837950-838075:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841154-841254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842832-842942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843025-843175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844913-845035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849037-849198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:849825-849952:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:850854-853814:1:exon

Exoc3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Exoc3
product: exocyst complex component 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034523304.1
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(819272..819371,819481..819618,827223..827442,833854..834535,837060..837177,837950..838075,841154..841254,842832..842942,843025..843175,844913..845035,849037..849198,849825..849952,850854..853814)
location: region:819272-853814:1
so has part: feature:819272-819371:1:exon
so has part: feature:819481-819618:1:exon
so has part: feature:827223-827442:1:exon
so has part: feature:833854-834535:1:exon
so has part: feature:837060-837177:1:exon
so has part: feature:837950-838075:1:exon
so has part: feature:841154-841254:1:exon
so has part: feature:842832-842942:1:exon
so has part: feature:843025-843175:1:exon
so has part: feature:844913-845035:1:exon
so has part: feature:849037-849198:1:exon
so has part: feature:849825-849952:1:exon
so has part: feature:850854-853814:1:exon

position:819272:1
position: 819272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819272-819371:1:exon

position:819371:1
position: 819371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:819481-819618:1:exon

position:819481:1
position: 819481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:827223-827442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833854-834535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837060-837177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:837950-838075:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841154-841254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842832-842942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843025-843175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844913-845035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849037-849198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:849825-849952:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:850854-853814:1:exon

Exoc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Exoc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 3 isoform X2
translation: METDLEAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQLHNALNDVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRETQDLIEQGALLQAHRKLMDLECSRDGLMCEQYRMDSGNKRDMTLIHGYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLVSVVRIIEREEKIDRRILDRKKQTGFVPPGRPKNWKEKMFAILDRTVTTRIEGTQADTRESDKMWLVRHLEIIRKYVLDDLIIAKNLMVQCFPPHYEIFKNLLSMYHQALSTRMQDLASEDLEANEIVSLLTWVLNTYTSTEMMGNVELAPEVDVSALDPLLSANVVSELLDTYMSTLTSNIIAWLRKALETDKKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIISLKRKYLKTEAEEGLCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICVTVEDYFNDFAKIKKPYKKRMTAEAHRRVVVEYLRAVMQKRISFRSAEERKEGAEKMVREAEQLRFLFRKLASGFGEDADGHCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLALRGDASRDMKQTIMETLEQGPMQASPNYVPIFKEIVVPSLNVAKLLK
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(819369..819371,819481..819618,827223..827442,833854..834535,837060..837177,837950..838075,841154..841254,842832..842942,843025..843175,844913..845035,849037..849198,849825..849952,850854..851025)
location: region:819369-851025:1
so has part: feature:819369-819371:1:exon
so has part: feature:819481-819618:1:exon
so has part: feature:827223-827442:1:exon
so has part: feature:833854-834535:1:exon
so has part: feature:837060-837177:1:exon
so has part: feature:837950-838075:1:exon
so has part: feature:841154-841254:1:exon
so has part: feature:842832-842942:1:exon
so has part: feature:843025-843175:1:exon
so has part: feature:844913-845035:1:exon
so has part: feature:849037-849198:1:exon
so has part: feature:849825-849952:1:exon
so has part: feature:850854-851025:1:exon

XP_034379195.1
type: Protein
SIO_000068: ncbiprotein

position:819369:1
position: 819369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851025:1
position: 851025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819369-819371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:819481-819618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827223-827442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833854-834535:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837060-837177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:837950-838075:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841154-841254:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842832-842942:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:843025-843175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:844913-845035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849037-849198:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:849825-849952:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:850854-851025:1:exon

Exoc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Exoc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 3 isoform X1
translation: MCKDSACFLTMKETDLEAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQLHNALNDVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRETQDLIEQGALLQAHRKLMDLECSRDGLMCEQYRMDSGNKRDMTLIHGYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLVSVVRIIEREEKIDRRILDRKKQTGFVPPGRPKNWKEKMFAILDRTVTTRIEGTQADTRESDKMWLVRHLEIIRKYVLDDLIIAKNLMVQCFPPHYEIFKNLLSMYHQALSTRMQDLASEDLEANEIVSLLTWVLNTYTSTEMMGNVELAPEVDVSALDPLLSANVVSELLDTYMSTLTSNIIAWLRKALETDKKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIISLKRKYLKTEAEEGLCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICVTVEDYFNDFAKIKKPYKKRMTAEAHRRVVVEYLRAVMQKRISFRSAEERKEGAEKMVREAEQLRFLFRKLASGFGEDADGHCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLALRGDASRDMKQTIMETLEQGPMQASPNYVPIFKEIVVPSLNVAKLLK
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(819445..819618,827223..827442,833854..834535,837060..837177,837950..838075,841154..841254,842832..842942,843025..843175,844913..845035,849037..849198,849825..849952,850854..851025)
location: region:819445-851025:1
so has part: feature:819445-819618:1:exon
so has part: feature:827223-827442:1:exon
so has part: feature:833854-834535:1:exon
so has part: feature:837060-837177:1:exon
so has part: feature:837950-838075:1:exon
so has part: feature:841154-841254:1:exon
so has part: feature:842832-842942:1:exon
so has part: feature:843025-843175:1:exon
so has part: feature:844913-845035:1:exon
so has part: feature:849037-849198:1:exon
so has part: feature:849825-849952:1:exon
so has part: feature:850854-851025:1:exon

XP_034379193.1
type: Protein
SIO_000068: ncbiprotein

position:819445:1
position: 819445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819445-819618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827223-827442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833854-834535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837060-837177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837950-838075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:841154-841254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:842832-842942:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:843025-843175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844913-845035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849037-849198:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849825-849952:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:850854-851025:1:exon

Exoc3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Exoc3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exocyst complex component 3 isoform X1
translation: MCKDSACFLTMKETDLEAVATAVQRVAGMLQRPDQLDKVEQYRRREARKKASVEARLKAAIQSQLDGVRTGLSQLHNALNDVKDIQQSLADVSKDWRQSINTIESLKDVKDAVVQHSQLAAAVENLKNIFSVPEIVRETQDLIEQGALLQAHRKLMDLECSRDGLMCEQYRMDSGNKRDMTLIHGYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLVSVVRIIEREEKIDRRILDRKKQTGFVPPGRPKNWKEKMFAILDRTVTTRIEGTQADTRESDKMWLVRHLEIIRKYVLDDLIIAKNLMVQCFPPHYEIFKNLLSMYHQALSTRMQDLASEDLEANEIVSLLTWVLNTYTSTEMMGNVELAPEVDVSALDPLLSANVVSELLDTYMSTLTSNIIAWLRKALETDKKDWSKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIISLKRKYLKTEAEEGLCLSQPSMDGILDAIAKEGCSSLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICVTVEDYFNDFAKIKKPYKKRMTAEAHRRVVVEYLRAVMQKRISFRSAEERKEGAEKMVREAEQLRFLFRKLASGFGEDADGHCDTIVAVAEVIKLTDPSLLYLEVSTLVSKYPDIRDDHIGALLALRGDASRDMKQTIMETLEQGPMQASPNYVPIFKEIVVPSLNVAKLLK
SIO_010081: Exoc3
subclass of: SO_0000673
so part of: Exoc3
location: join(819445..819618,827223..827442,833854..834535,837060..837177,837950..838075,841154..841254,842832..842942,843025..843175,844913..845035,849037..849198,849825..849952,850854..851025)
location: region:819445-851025:1
so has part: feature:819445-819618:1:exon
so has part: feature:827223-827442:1:exon
so has part: feature:833854-834535:1:exon
so has part: feature:837060-837177:1:exon
so has part: feature:837950-838075:1:exon
so has part: feature:841154-841254:1:exon
so has part: feature:842832-842942:1:exon
so has part: feature:843025-843175:1:exon
so has part: feature:844913-845035:1:exon
so has part: feature:849037-849198:1:exon
so has part: feature:849825-849952:1:exon
so has part: feature:850854-851025:1:exon

XP_034379194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:819445-819618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827223-827442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833854-834535:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:837060-837177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:837950-838075:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:841154-841254:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:842832-842942:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:843025-843175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:844913-845035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849037-849198:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849825-849952:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:850854-851025:1:exon

Slc9a3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slc9a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(856404..900405)
location: region:856404-900405:-1
so has part: feature:856404-900405:-1:exon
subclass of: SO_0000010

117723757
type: Gene
SIO_000068: ncbigene

position:856404:-1
position: 856404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900405:-1
position: 900405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856404-900405:-1:exon

Slc9a3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc9a3
product: solute carrier family 9 member A3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034523301.1
SIO_010081: Slc9a3
subclass of: SO_0000673
so part of: Slc9a3
location: complement(join(856404..857818,858173..858280,858632..858704,858895..859071,859283..859412,859962..860077,861305..861434,862504..862574,862690..862779,863254..863456,863813..864033,864637..864814,865343..865421,867092..867252,871131..871433,900204..900405))
location: region:856404-900405:-1
so has part: feature:900204-900405:-1:exon
so has part: feature:871131-871433:-1:exon
so has part: feature:867092-867252:-1:exon
so has part: feature:865343-865421:-1:exon
so has part: feature:864637-864814:-1:exon
so has part: feature:863813-864033:-1:exon
so has part: feature:863254-863456:-1:exon
so has part: feature:862690-862779:-1:exon
so has part: feature:862504-862574:-1:exon
so has part: feature:861305-861434:-1:exon
so has part: feature:859962-860077:-1:exon
so has part: feature:859283-859412:-1:exon
so has part: feature:858895-859071:-1:exon
so has part: feature:858632-858704:-1:exon
so has part: feature:858173-858280:-1:exon
so has part: feature:856404-857818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:900204-900405:-1:exon

position:900204:-1
position: 900204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:871131-871433:-1:exon

position:871131:-1
position: 871131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871433:-1
position: 871433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867092-867252:-1:exon

position:867092:-1
position: 867092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867252:-1
position: 867252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:865343-865421:-1:exon

position:865343:-1
position: 865343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865421:-1
position: 865421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864637-864814:-1:exon

position:864637:-1
position: 864637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864814:-1
position: 864814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:863813-864033:-1:exon

position:863813:-1
position: 863813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864033:-1
position: 864033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:863254-863456:-1:exon

position:863254:-1
position: 863254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863456:-1
position: 863456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:862690-862779:-1:exon

position:862690:-1
position: 862690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862779:-1
position: 862779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:862504-862574:-1:exon

position:862504:-1
position: 862504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862574:-1
position: 862574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:861305-861434:-1:exon

position:861305:-1
position: 861305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861434:-1
position: 861434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:859962-860077:-1:exon

position:859962:-1
position: 859962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860077:-1
position: 860077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:859283-859412:-1:exon

position:859283:-1
position: 859283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859412:-1
position: 859412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:858895-859071:-1:exon

position:858895:-1
position: 858895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859071:-1
position: 859071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:858632-858704:-1:exon

position:858632:-1
position: 858632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858704:-1
position: 858704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:858173-858280:-1:exon

position:858173:-1
position: 858173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858280:-1
position: 858280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:856404-857818:-1:exon

position:857818:-1
position: 857818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc9a3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc9a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 3
translation: MWHRALGPGWKPLLALALALTSLRGARGIEEEPSPGASFQIVTFKWHHVQDPYIIALWILVASLAKIVFHLSHKVTSIVPESALLIVLGLVLGGIVWAADHIASFTLTPTLFFFYLLPPIVLDAGYFMPNRLFFGNLGTILLYAVIGTIWNAATTGLSLYGVFLSGLMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLLNDAVTVVLYNVFESFVTLGGDAVTGVDCVKGIVSFFVVSLGGTLVGVVFAFLLSLVTRFTKHVRIIEPGFVFVISYLSYLTSEMLSLSAILAITFCGICCQKYVKANISEQSATTVRYTMKMLASGAETIIFMFLGISAVDPRIWTWNTAFVLLTLVFISVYRAIGVVLQTWILNRYRMVQLETIDQVVMSYGGLRGAVAYALVVLLDEKKVKEKNLFVSTTLIVVFFTVIFQGLTIKPLVQWLKVKRSEQREPKLNEKLHGRAFDHILSAIEDISGQIGHNYLRDKWSNFDRKFLSKVLMRRSAQKSRDRILNVFHELNLKDAISYVAEGERRGSLAFIRSPSTDNMVNVDFSTPRPSTVEASVSYFLRENVSAVCLDMQSLEQRRRSIRDTEDMVTHHTLQQYLYKPRQEYKHLYSRHELTPNEDEKQDKEIFHRTMRKRLESFKSAKLGINQNKKAAKLYKRERAQKRRNSSIPNGKLPMENLAHNFTIKEKDLELSEPEEATNYEEISGGIEFLASVTKDVASDSGAGIDNPVFSPDEDLDPSILSRVPPWLSPGETVVPSQRARFQIPNSPSNFRRLTPFRLSNKSVDSFLLADGHEEQQLQPASPESTHM
SIO_010081: Slc9a3
subclass of: SO_0000673
so part of: Slc9a3
location: complement(join(857562..857818,858173..858280,858632..858704,858895..859071,859283..859412,859962..860077,861305..861434,862504..862574,862690..862779,863254..863456,863813..864033,864637..864814,865343..865421,867092..867252,871131..871433,900204..900405))
location: region:857562-900405:-1
so has part: feature:900204-900405:-1:exon
so has part: feature:871131-871433:-1:exon
so has part: feature:867092-867252:-1:exon
so has part: feature:865343-865421:-1:exon
so has part: feature:864637-864814:-1:exon
so has part: feature:863813-864033:-1:exon
so has part: feature:863254-863456:-1:exon
so has part: feature:862690-862779:-1:exon
so has part: feature:862504-862574:-1:exon
so has part: feature:861305-861434:-1:exon
so has part: feature:859962-860077:-1:exon
so has part: feature:859283-859412:-1:exon
so has part: feature:858895-859071:-1:exon
so has part: feature:858632-858704:-1:exon
so has part: feature:858173-858280:-1:exon
so has part: feature:857562-857818:-1:exon

XP_034379192.1
type: Protein
SIO_000068: ncbiprotein

position:857562:-1
position: 857562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900204-900405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871131-871433:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867092-867252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:865343-865421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864637-864814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:863813-864033:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:863254-863456:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:862690-862779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:862504-862574:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:861305-861434:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859962-860077:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859283-859412:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:858895-859071:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858632-858704:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:858173-858280:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:857562-857818:-1:exon

Cep72
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Cep72
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 949682..982479
location: region:949682-982479:1
so has part: feature:949682-982479:1:exon
subclass of: SO_0000010

117723844
type: Gene
SIO_000068: ncbigene

position:949682:1
position: 949682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982479:1
position: 982479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949682-982479:1:exon

Cep72
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cep72
product: centrosomal protein 72
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 46% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523408.1
SIO_010081: Cep72
subclass of: SO_0000673
so part of: Cep72
location: join(949682..949775,952316..952443,953796..953988,957268..957376,963756..963934,965217..965402,966449..966753,967777..967915,969368..969564,972335..972461,978018..978129,980632..982479)
location: region:949682-982479:1
so has part: feature:949682-949775:1:exon
so has part: feature:952316-952443:1:exon
so has part: feature:953796-953988:1:exon
so has part: feature:957268-957376:1:exon
so has part: feature:963756-963934:1:exon
so has part: feature:965217-965402:1:exon
so has part: feature:966449-966753:1:exon
so has part: feature:967777-967915:1:exon
so has part: feature:969368-969564:1:exon
so has part: feature:972335-972461:1:exon
so has part: feature:978018-978129:1:exon
so has part: feature:980632-982479:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949682-949775:1:exon

position:949775:1
position: 949775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:952316-952443:1:exon

position:952316:1
position: 952316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952443:1
position: 952443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:953796-953988:1:exon

position:953796:1
position: 953796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953988:1
position: 953988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957268-957376:1:exon

position:957268:1
position: 957268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957376:1
position: 957376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:963756-963934:1:exon

position:963756:1
position: 963756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963934:1
position: 963934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:965217-965402:1:exon

position:965217:1
position: 965217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965402:1
position: 965402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:966449-966753:1:exon

position:966449:1
position: 966449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966753:1
position: 966753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:967777-967915:1:exon

position:967777:1
position: 967777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967915:1
position: 967915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:969368-969564:1:exon

position:969368:1
position: 969368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969564:1
position: 969564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:972335-972461:1:exon

position:972335:1
position: 972335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972461:1
position: 972461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:978018-978129:1:exon

position:978018:1
position: 978018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978129:1
position: 978129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:980632-982479:1:exon

position:980632:1
position: 980632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cep72
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cep72
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 72 kDa
translation: MAPGQRLVLCEETVRERSGFGPHRDLAELRSLSIPGTYQEKITHLGNSLMHLTALKSLDLSRNSLVSLEGIQYLVSLESLNLYYNCISSLAEVFRLHTLVELQDVDFRLNPVVKNESDYRLFIVHMLPKLRQLDDRPVRESERKASQLHFAPEDSVNSKENFSATSTVGRPHHLRNRCTETSAKKCLVMDADDEAVLNLIAECEWDLSNPPGNMNSSQKEHEADLHYAQESRHLLSPLSIQHQCGDSARRGHEKKKTTSRGCPGHSPQDQLCGEPEACHMHVQHARITSQPDSVDVEDCASSSQKSSLSSQKIVNPLPVPEKYRKRRMPGGRFQVPSDRECLSFLERADGPSSLEDSLSRQDGLEGQSQVALSHSQALEAEERTSHGTSDPRVLSPKLCSAVMPERRSTLEVALLEALLDLIDRCSSGSGSLHGNEAFLAQARHVLSSLQEFTATRDSSALEKEGIGYLSLENKTLQSRLAEQQQQYTATVTKVTAELNNTKRELDTLKQHLDKSLEENSNLKSLLYNVKKEVKNADTSTALTLQIAGLQASMKQLSGEVVELKQHVEHYDKIQELTQMLQESHSSLVSTNEHLLQELSRTRAQHRAEVEQMHWSFQEFKKTTALIPHRSSRLGGRQSC
SIO_010081: Cep72
subclass of: SO_0000673
so part of: Cep72
location: join(949697..949775,952316..952443,953796..953988,957268..957376,963756..963934,965217..965402,966449..966753,967777..967915,969368..969564,972335..972461,978018..978129,980632..980797)
location: region:949697-980797:1
so has part: feature:949697-949775:1:exon
so has part: feature:952316-952443:1:exon
so has part: feature:953796-953988:1:exon
so has part: feature:957268-957376:1:exon
so has part: feature:963756-963934:1:exon
so has part: feature:965217-965402:1:exon
so has part: feature:966449-966753:1:exon
so has part: feature:967777-967915:1:exon
so has part: feature:969368-969564:1:exon
so has part: feature:972335-972461:1:exon
so has part: feature:978018-978129:1:exon
so has part: feature:980632-980797:1:exon

XP_034379299.1
type: Protein
SIO_000068: ncbiprotein

position:949697:1
position: 949697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980797:1
position: 980797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949697-949775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952316-952443:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953796-953988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957268-957376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:963756-963934:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:965217-965402:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:966449-966753:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:967777-967915:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:969368-969564:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:972335-972461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978018-978129:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:980632-980797:1:exon

LOC117723845
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(974146..974942)
location: region:974146-974942:-1
so has part: feature:974146-974942:-1:exon

117723845
type: Gene
SIO_000068: ncbigene

position:974146:-1
position: 974146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974942:-1
position: 974942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974146-974942:-1:exon

LOC117723845
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723845
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723845
subclass of: SO_0000673
so part of: LOC117723845
location: complement(974146..974942)
location: region:974146-974942:-1
so has part: feature:974146-974942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:974146-974942:-1:exon

Tppp
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tppp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(983214..1008396)
location: region:983214-1008396:-1
so has part: feature:983214-1008396:-1:exon
subclass of: SO_0000010

117723846
type: Gene
SIO_000068: ncbigene

position:983214:-1
position: 983214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008396:-1
position: 1008396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983214-1008396:-1:exon

Tppp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tppp
product: tubulin polymerization promoting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 long SRA reads, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034523409.1
SIO_010081: Tppp
subclass of: SO_0000673
so part of: Tppp
location: complement(join(983214..987788,988104..988257,998221..998532,1008355..1008396))
location: region:983214-1008396:-1
so has part: feature:1008355-1008396:-1:exon
so has part: feature:998221-998532:-1:exon
so has part: feature:988104-988257:-1:exon
so has part: feature:983214-987788:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1008355-1008396:-1:exon

position:1008355:-1
position: 1008355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:998221-998532:-1:exon

position:998221:-1
position: 998221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998532:-1
position: 998532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:988104-988257:-1:exon

position:988104:-1
position: 988104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988257:-1
position: 988257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:983214-987788:-1:exon

position:987788:-1
position: 987788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tppp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tppp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polymerization-promoting protein
translation: MADSKAKPAKAANKTPPKSPGDPAKAAKRLSLESEGANEGAVAAPELSALEEAFRRFAVHGDTRATGKEMHGKNWSKLCKDCHVIDGKNVTVTDVDIVFSKIKGKSCRTITFEQFQEALEELAKKRFKDKSSEEAVREVHRLIEGRAPVISGVTKAVSSPTVSRLTDTSKFTGSHKERFDQSGKGKGKAGRVDLVDESGYVPGYKHAGTYDQKVQGGK
SIO_010081: Tppp
subclass of: SO_0000673
so part of: Tppp
location: complement(join(987594..987788,988104..988257,998221..998528))
location: region:987594-998528:-1
so has part: feature:998221-998528:-1:exon
so has part: feature:988104-988257:-1:exon
so has part: feature:987594-987788:-1:exon

XP_034379300.1
type: Protein
SIO_000068: ncbiprotein

position:987594:-1
position: 987594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998528:-1
position: 998528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998221-998528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:988104-988257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:987594-987788:-1:exon

LOC117723957
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1023921..1052096)
location: region:1023921-1052096:-1
so has part: feature:1023921-1052096:-1:exon
subclass of: SO_0000010

117723957
type: Gene
SIO_000068: ncbigene

position:1023921:-1
position: 1023921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052096:-1
position: 1052096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023921-1052096:-1:exon

LOC117723957
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723957
product: probable palmitoyltransferase ZDHHC11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523558.1
SIO_010081: LOC117723957
subclass of: SO_0000673
so part of: LOC117723957
location: complement(join(1023921..1024274,1024804..1024896,1029263..1029303,1032102..1032214,1035707..1035862,1037756..1037880,1041295..1041396,1042123..1042301,1050415..1050636,1052007..1052096))
location: region:1023921-1052096:-1
so has part: feature:1052007-1052096:-1:exon
so has part: feature:1050415-1050636:-1:exon
so has part: feature:1042123-1042301:-1:exon
so has part: feature:1041295-1041396:-1:exon
so has part: feature:1037756-1037880:-1:exon
so has part: feature:1035707-1035862:-1:exon
so has part: feature:1032102-1032214:-1:exon
so has part: feature:1029263-1029303:-1:exon
so has part: feature:1024804-1024896:-1:exon
so has part: feature:1023921-1024274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052007-1052096:-1:exon

position:1052007:-1
position: 1052007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1050415-1050636:-1:exon

position:1050415:-1
position: 1050415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050636:-1
position: 1050636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1042123-1042301:-1:exon

position:1042123:-1
position: 1042123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042301:-1
position: 1042301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1041295-1041396:-1:exon

position:1041295:-1
position: 1041295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041396:-1
position: 1041396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1037756-1037880:-1:exon

position:1037756:-1
position: 1037756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037880:-1
position: 1037880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1035707-1035862:-1:exon

position:1035707:-1
position: 1035707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035862:-1
position: 1035862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1032102-1032214:-1:exon

position:1032102:-1
position: 1032102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032214:-1
position: 1032214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1029263-1029303:-1:exon

position:1029263:-1
position: 1029263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029303:-1
position: 1029303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1024804-1024896:-1:exon

position:1024804:-1
position: 1024804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024896:-1
position: 1024896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1023921-1024274:-1:exon

position:1024274:-1
position: 1024274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117723957
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: LOC117723957
product: probable palmitoyltransferase ZDHHC11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004608746.1
SIO_010081: LOC117723957
so part of: LOC117723957
location: complement(join(1023921..1024274,1024804..1024896,1029263..1029303,1032047..1032214,1035707..1035862,1037756..1037880,1041295..1041396,1042123..1042301,1050415..1050636,1052007..1052096))
location: region:1023921-1052096:-1
so has part: feature:1052007-1052096:-1:exon
so has part: feature:1050415-1050636:-1:exon
so has part: feature:1042123-1042301:-1:exon
so has part: feature:1041295-1041396:-1:exon
so has part: feature:1037756-1037880:-1:exon
so has part: feature:1035707-1035862:-1:exon
so has part: feature:1032047-1032214:-1:exon
so has part: feature:1029263-1029303:-1:exon
so has part: feature:1024804-1024896:-1:exon
so has part: feature:1023921-1024274:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052007-1052096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1050415-1050636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1042123-1042301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1041295-1041396:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037756-1037880:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035707-1035862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032047-1032214:-1:exon

position:1032047:-1
position: 1032047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1029263-1029303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1024804-1024896:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1023921-1024274:-1:exon

LOC117723957
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable palmitoyltransferase ZDHHC11
translation: MREMNICGINQNRVLPETQENNVKKHQPRPLSRVNGWSTPLHSFQALSWTTYFTMSIVTFGIFIPFLPTTWKHAANIVMGGVFIFHLIVHLIAITIDPADNNVRLKKDYMKPMPTFDRSKHAHVIQNQYCHLCEVTVSKKAKHCSSCNKCISGFDHHCKWLNNCVGRRNYWFFFCSVASAAVGLLGLMIILLYIFIQYFVNPDELRTDPLYKEISSENIWLLFLSLWPVPVKTPVVLSIVVLVLLLDVASFVLLGHLFLFHVYLIGKNLSTFDYMMKIRYQKNPHLPEKKELPLQKKGSLPQEKSNSLTWPKSPPRMETPRFLLPTFSTQSNMCFMVPPPKTLPQ
SIO_010081: LOC117723957
subclass of: SO_0000673
so part of: LOC117723957
location: complement(join(1024806..1024896,1029263..1029303,1032102..1032214,1035707..1035862,1037756..1037880,1041295..1041396,1042123..1042301,1050415..1050636,1052007..1052015))
location: region:1024806-1052015:-1
so has part: feature:1052007-1052015:-1:exon
so has part: feature:1050415-1050636:-1:exon
so has part: feature:1042123-1042301:-1:exon
so has part: feature:1041295-1041396:-1:exon
so has part: feature:1037756-1037880:-1:exon
so has part: feature:1035707-1035862:-1:exon
so has part: feature:1032102-1032214:-1:exon
so has part: feature:1029263-1029303:-1:exon
so has part: feature:1024806-1024896:-1:exon

XP_034379449.1
type: Protein
SIO_000068: ncbiprotein

position:1024806:-1
position: 1024806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052015:-1
position: 1052015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052007-1052015:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1050415-1050636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1042123-1042301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1041295-1041396:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1037756-1037880:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1035707-1035862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1032102-1032214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029263-1029303:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1024806-1024896:-1:exon

Brd9
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1055183..1078969)
location: region:1055183-1078969:-1
so has part: feature:1055183-1078969:-1:exon
subclass of: SO_0000010

117723865
type: Gene
SIO_000068: ncbigene

position:1055183:-1
position: 1055183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078969:-1
position: 1078969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1055183-1078969:-1:exon

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Brd9
product: bromodomain containing 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523428.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(1055183..1055836,1058165..1058332,1060393..1060495,1061359..1061397,1063838..1063949,1065236..1065368,1067856..1067951,1069290..1069365,1071987..1072119,1074081..1074196,1074831..1074941,1076074..1076218,1076584..1076644,1077742..1077874,1078082..1078296,1078840..1078969))
location: region:1055183-1078969:-1
so has part: feature:1078840-1078969:-1:exon
so has part: feature:1078082-1078296:-1:exon
so has part: feature:1077742-1077874:-1:exon
so has part: feature:1076584-1076644:-1:exon
so has part: feature:1076074-1076218:-1:exon
so has part: feature:1074831-1074941:-1:exon
so has part: feature:1074081-1074196:-1:exon
so has part: feature:1071987-1072119:-1:exon
so has part: feature:1069290-1069365:-1:exon
so has part: feature:1067856-1067951:-1:exon
so has part: feature:1065236-1065368:-1:exon
so has part: feature:1063838-1063949:-1:exon
so has part: feature:1061359-1061397:-1:exon
so has part: feature:1060393-1060495:-1:exon
so has part: feature:1058165-1058332:-1:exon
so has part: feature:1055183-1055836:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1078840-1078969:-1:exon

position:1078840:-1
position: 1078840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1078082-1078296:-1:exon

position:1078082:-1
position: 1078082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078296:-1
position: 1078296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1077742-1077874:-1:exon

position:1077742:-1
position: 1077742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077874:-1
position: 1077874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1076584-1076644:-1:exon

position:1076584:-1
position: 1076584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076644:-1
position: 1076644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1076074-1076218:-1:exon

position:1076074:-1
position: 1076074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076218:-1
position: 1076218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1074831-1074941:-1:exon

position:1074831:-1
position: 1074831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074941:-1
position: 1074941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1074081-1074196:-1:exon

position:1074081:-1
position: 1074081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074196:-1
position: 1074196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1071987-1072119:-1:exon

position:1071987:-1
position: 1071987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072119:-1
position: 1072119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1069290-1069365:-1:exon

position:1069290:-1
position: 1069290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069365:-1
position: 1069365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1067856-1067951:-1:exon

position:1067856:-1
position: 1067856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067951:-1
position: 1067951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1065236-1065368:-1:exon

position:1065236:-1
position: 1065236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065368:-1
position: 1065368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1063838-1063949:-1:exon

position:1063838:-1
position: 1063838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063949:-1
position: 1063949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1061359-1061397:-1:exon

position:1061359:-1
position: 1061359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061397:-1
position: 1061397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1060393-1060495:-1:exon

position:1060393:-1
position: 1060393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060495:-1
position: 1060495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1058165-1058332:-1:exon

position:1058165:-1
position: 1058165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058332:-1
position: 1058332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1055183-1055836:-1:exon

position:1055836:-1
position: 1055836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Brd9
product: bromodomain containing 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523429.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(1055186..1055836,1058165..1058332,1060393..1060495,1061359..1061397,1063838..1063949,1065236..1065368,1067856..1067951,1069290..1069365,1071987..1072119,1074081..1074193,1074831..1074941,1076074..1076218,1076584..1076644,1077742..1077874,1078082..1078296,1078840..1078969))
location: region:1055186-1078969:-1
so has part: feature:1078840-1078969:-1:exon
so has part: feature:1078082-1078296:-1:exon
so has part: feature:1077742-1077874:-1:exon
so has part: feature:1076584-1076644:-1:exon
so has part: feature:1076074-1076218:-1:exon
so has part: feature:1074831-1074941:-1:exon
so has part: feature:1074081-1074193:-1:exon
so has part: feature:1071987-1072119:-1:exon
so has part: feature:1069290-1069365:-1:exon
so has part: feature:1067856-1067951:-1:exon
so has part: feature:1065236-1065368:-1:exon
so has part: feature:1063838-1063949:-1:exon
so has part: feature:1061359-1061397:-1:exon
so has part: feature:1060393-1060495:-1:exon
so has part: feature:1058165-1058332:-1:exon
so has part: feature:1055186-1055836:-1:exon

position:1055186:-1
position: 1055186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078840-1078969:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078082-1078296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077742-1077874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1076584-1076644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1076074-1076218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074831-1074941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074081-1074193:-1:exon

position:1074193:-1
position: 1074193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1071987-1072119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069290-1069365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1067856-1067951:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065236-1065368:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1063838-1063949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1061359-1061397:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1060393-1060495:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1058165-1058332:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1055186-1055836:-1:exon

Brd9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Brd9
product: bromodomain containing 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523430.1
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(1055186..1055836,1058165..1058332,1060393..1060495,1061359..1061397,1063838..1063949,1065236..1065368,1067856..1067951,1069290..1069365,1071987..1072119,1074081..1074256,1074831..1074941,1076074..1076218,1076584..1076644,1077742..1077874,1078082..1078296,1078840..1078965))
location: region:1055186-1078965:-1
so has part: feature:1078840-1078965:-1:exon
so has part: feature:1078082-1078296:-1:exon
so has part: feature:1077742-1077874:-1:exon
so has part: feature:1076584-1076644:-1:exon
so has part: feature:1076074-1076218:-1:exon
so has part: feature:1074831-1074941:-1:exon
so has part: feature:1074081-1074256:-1:exon
so has part: feature:1071987-1072119:-1:exon
so has part: feature:1069290-1069365:-1:exon
so has part: feature:1067856-1067951:-1:exon
so has part: feature:1065236-1065368:-1:exon
so has part: feature:1063838-1063949:-1:exon
so has part: feature:1061359-1061397:-1:exon
so has part: feature:1060393-1060495:-1:exon
so has part: feature:1058165-1058332:-1:exon
so has part: feature:1055186-1055836:-1:exon

position:1078965:-1
position: 1078965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078840-1078965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078082-1078296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077742-1077874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1076584-1076644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1076074-1076218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074831-1074941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074081-1074256:-1:exon

position:1074256:-1
position: 1074256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1071987-1072119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069290-1069365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1067856-1067951:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065236-1065368:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1063838-1063949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1061359-1061397:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1060393-1060495:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1058165-1058332:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1055186-1055836:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X2
translation: MGKKHKKHKAEWRSSYEDYTDTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDEEERRKRKEEKKRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPIQRLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKAALLGSEDPAVEEPVPEVVPVQVETTKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRINRFLPGGKMGYLKKLGDGSLLYSVVNATEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMIFQLKQRRSIPMRPADEMKVGDPLGDSGGPVLDFMSMKQYPDVSLDVSMLSSLGKVKKELDHEDSHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSTASEREQHPPGSPSRLSVGDQPDVTHDPYEFLQSPEPAVPAKN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(1055736..1055836,1058165..1058332,1060393..1060495,1061359..1061397,1063838..1063949,1065236..1065368,1067856..1067951,1069290..1069365,1071987..1072119,1074081..1074193,1074831..1074941,1076074..1076218,1076584..1076644,1077742..1077874,1078082..1078296,1078840..1078891))
location: region:1055736-1078891:-1
so has part: feature:1078840-1078891:-1:exon
so has part: feature:1078082-1078296:-1:exon
so has part: feature:1077742-1077874:-1:exon
so has part: feature:1076584-1076644:-1:exon
so has part: feature:1076074-1076218:-1:exon
so has part: feature:1074831-1074941:-1:exon
so has part: feature:1074081-1074193:-1:exon
so has part: feature:1071987-1072119:-1:exon
so has part: feature:1069290-1069365:-1:exon
so has part: feature:1067856-1067951:-1:exon
so has part: feature:1065236-1065368:-1:exon
so has part: feature:1063838-1063949:-1:exon
so has part: feature:1061359-1061397:-1:exon
so has part: feature:1060393-1060495:-1:exon
so has part: feature:1058165-1058332:-1:exon
so has part: feature:1055736-1055836:-1:exon

XP_034379320.1
type: Protein
SIO_000068: ncbiprotein

position:1055736:-1
position: 1055736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078891:-1
position: 1078891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1078840-1078891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078082-1078296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077742-1077874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1076584-1076644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1076074-1076218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074831-1074941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074081-1074193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071987-1072119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069290-1069365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1067856-1067951:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065236-1065368:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1063838-1063949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1061359-1061397:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1060393-1060495:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1058165-1058332:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1055736-1055836:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X1
translation: MGKKHKKHKAEWRSSYEDYTDTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDEEERRKRKEEKKRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPIQRLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKQAALLGSEDPAVEEPVPEVVPVQVETTKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRINRFLPGGKMGYLKKLGDGSLLYSVVNATEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMIFQLKQRRSIPMRPADEMKVGDPLGDSGGPVLDFMSMKQYPDVSLDVSMLSSLGKVKKELDHEDSHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSTASEREQHPPGSPSRLSVGDQPDVTHDPYEFLQSPEPAVPAKN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(1055736..1055836,1058165..1058332,1060393..1060495,1061359..1061397,1063838..1063949,1065236..1065368,1067856..1067951,1069290..1069365,1071987..1072119,1074081..1074196,1074831..1074941,1076074..1076218,1076584..1076644,1077742..1077874,1078082..1078296,1078840..1078891))
location: region:1055736-1078891:-1
so has part: feature:1078840-1078891:-1:exon
so has part: feature:1078082-1078296:-1:exon
so has part: feature:1077742-1077874:-1:exon
so has part: feature:1076584-1076644:-1:exon
so has part: feature:1076074-1076218:-1:exon
so has part: feature:1074831-1074941:-1:exon
so has part: feature:1074081-1074196:-1:exon
so has part: feature:1071987-1072119:-1:exon
so has part: feature:1069290-1069365:-1:exon
so has part: feature:1067856-1067951:-1:exon
so has part: feature:1065236-1065368:-1:exon
so has part: feature:1063838-1063949:-1:exon
so has part: feature:1061359-1061397:-1:exon
so has part: feature:1060393-1060495:-1:exon
so has part: feature:1058165-1058332:-1:exon
so has part: feature:1055736-1055836:-1:exon

XP_034379319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1078840-1078891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078082-1078296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077742-1077874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1076584-1076644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1076074-1076218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074831-1074941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074081-1074196:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071987-1072119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069290-1069365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1067856-1067951:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065236-1065368:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1063838-1063949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1061359-1061397:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1060393-1060495:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1058165-1058332:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1055736-1055836:-1:exon

Brd9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Brd9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain-containing protein 9 isoform X3
translation: MGKKHKKHKAEWRSSYEDYTDTPLEKPLKLVLKVGGSEVTELSGSGHDSSYYDDRSDHERERHREKKKKKKKKSEKEKHLDEEERRKRKEEKKRKREKEHCDSEGEADAFDPGKKVEVEPPPDRPVRACRTQPAENESTPIQRLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMMSKERLLALKRSMSFMQDMDFSQQAALLGSEDPAVEEPVPEVVPVQVETTKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRINRFLPGGKMGYLKKLGDGSLLYSVVNATEPDADEEETHPVDLSSLSSKLLPGFTTLGFKDERRNKVTFLSSASTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKMVDDLLDQITGGDHSRMIFQLKQRRSIPMRPADEMKVGDPLGDSGGPVLDFMSMKQYPDVSLDVSMLSSLGKVKKELDHEDSHLNLDETARLLQDLHEAQAERGGSRPSSNLSSLSTASEREQHPPGSPSRLSVGDQPDVTHDPYEFLQSPEPAVPAKN
SIO_010081: Brd9
subclass of: SO_0000673
so part of: Brd9
location: complement(join(1055736..1055836,1058165..1058332,1060393..1060495,1061359..1061397,1063838..1063949,1065236..1065368,1067856..1067951,1069290..1069365,1071987..1072119,1074081..1074256,1074831..1074941,1076074..1076218,1076584..1076644,1077742..1077874,1078082..1078296,1078840..1078891))
location: region:1055736-1078891:-1
so has part: feature:1078840-1078891:-1:exon
so has part: feature:1078082-1078296:-1:exon
so has part: feature:1077742-1077874:-1:exon
so has part: feature:1076584-1076644:-1:exon
so has part: feature:1076074-1076218:-1:exon
so has part: feature:1074831-1074941:-1:exon
so has part: feature:1074081-1074256:-1:exon
so has part: feature:1071987-1072119:-1:exon
so has part: feature:1069290-1069365:-1:exon
so has part: feature:1067856-1067951:-1:exon
so has part: feature:1065236-1065368:-1:exon
so has part: feature:1063838-1063949:-1:exon
so has part: feature:1061359-1061397:-1:exon
so has part: feature:1060393-1060495:-1:exon
so has part: feature:1058165-1058332:-1:exon
so has part: feature:1055736-1055836:-1:exon

XP_034379321.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1078840-1078891:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078082-1078296:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1077742-1077874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1076584-1076644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1076074-1076218:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1074831-1074941:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074081-1074256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071987-1072119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1069290-1069365:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1067856-1067951:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065236-1065368:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1063838-1063949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1061359-1061397:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1060393-1060495:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1058165-1058332:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1055736-1055836:-1:exon

Trip13
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Trip13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1079012..1102267
location: region:1079012-1102267:1
so has part: feature:1079012-1102267:1:exon
subclass of: SO_0000010

117723867
type: Gene
SIO_000068: ncbigene

position:1079012:1
position: 1079012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102267:1
position: 1102267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079012-1102267:1:exon

Trip13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trip13
product: thyroid hormone receptor interactor 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 1 long SRA read, 8 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523431.1
SIO_010081: Trip13
subclass of: SO_0000673
so part of: Trip13
location: join(1079012..1079300,1080266..1080431,1085323..1085452,1087786..1087841,1088377..1088467,1090120..1090192,1094312..1094375,1095064..1095150,1095398..1095504,1096880..1097033,1099164..1099276,1100180..1100249,1101371..1102267)
location: region:1079012-1102267:1
so has part: feature:1079012-1079300:1:exon
so has part: feature:1080266-1080431:1:exon
so has part: feature:1085323-1085452:1:exon
so has part: feature:1087786-1087841:1:exon
so has part: feature:1088377-1088467:1:exon
so has part: feature:1090120-1090192:1:exon
so has part: feature:1094312-1094375:1:exon
so has part: feature:1095064-1095150:1:exon
so has part: feature:1095398-1095504:1:exon
so has part: feature:1096880-1097033:1:exon
so has part: feature:1099164-1099276:1:exon
so has part: feature:1100180-1100249:1:exon
so has part: feature:1101371-1102267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1079012-1079300:1:exon

position:1079300:1
position: 1079300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1080266-1080431:1:exon

position:1080266:1
position: 1080266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080431:1
position: 1080431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1085323-1085452:1:exon

position:1085323:1
position: 1085323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085452:1
position: 1085452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1087786-1087841:1:exon

position:1087786:1
position: 1087786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087841:1
position: 1087841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1088377-1088467:1:exon

position:1088377:1
position: 1088377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088467:1
position: 1088467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1090120-1090192:1:exon

position:1090120:1
position: 1090120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1090192:1
position: 1090192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1094312-1094375:1:exon

position:1094312:1
position: 1094312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094375:1
position: 1094375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1095064-1095150:1:exon

position:1095064:1
position: 1095064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095150:1
position: 1095150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1095398-1095504:1:exon

position:1095398:1
position: 1095398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1095504:1
position: 1095504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1096880-1097033:1:exon

position:1096880:1
position: 1096880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097033:1
position: 1097033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1099164-1099276:1:exon

position:1099164:1
position: 1099164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099276:1
position: 1099276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1100180-1100249:1:exon

position:1100180:1
position: 1100180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100249:1
position: 1100249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1101371-1102267:1:exon

position:1101371:1
position: 1101371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trip13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trip13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pachytene checkpoint protein 2 homolog
translation: MDEAVGDLKQALPCVAESPAVHVEVLQRSGSTAKKEDIKMSVYKLLNRHNIVFGDYVWTEFDEPFLTRNVQSVSIVDTELKAKDPQPIDLSACAIALHIFQLNEEGPSSENLDEETENIIAASHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSNITEKIDVAFVDRADIKQYIGPPSAAAIFRIYQSCLEELMKCQIIYPRQQLLTLRELEMIGFIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYIQAPSVTIEGFLQALSLAVDKQFEEKKKLSAYN
SIO_010081: Trip13
subclass of: SO_0000673
so part of: Trip13
location: join(1079209..1079300,1080266..1080431,1085323..1085452,1087786..1087841,1088377..1088467,1090120..1090192,1094312..1094375,1095064..1095150,1095398..1095504,1096880..1097033,1099164..1099276,1100180..1100249,1101371..1101466)
location: region:1079209-1101466:1
so has part: feature:1079209-1079300:1:exon
so has part: feature:1080266-1080431:1:exon
so has part: feature:1085323-1085452:1:exon
so has part: feature:1087786-1087841:1:exon
so has part: feature:1088377-1088467:1:exon
so has part: feature:1090120-1090192:1:exon
so has part: feature:1094312-1094375:1:exon
so has part: feature:1095064-1095150:1:exon
so has part: feature:1095398-1095504:1:exon
so has part: feature:1096880-1097033:1:exon
so has part: feature:1099164-1099276:1:exon
so has part: feature:1100180-1100249:1:exon
so has part: feature:1101371-1101466:1:exon

XP_034379322.1
type: Protein
SIO_000068: ncbiprotein

position:1079209:1
position: 1079209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101466:1
position: 1101466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079209-1079300:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080266-1080431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1085323-1085452:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087786-1087841:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1088377-1088467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1090120-1090192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1094312-1094375:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1095064-1095150:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095398-1095504:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1096880-1097033:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1099164-1099276:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1100180-1100249:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1101371-1101466:1:exon

Nkd2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Nkd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1172358..1200703
location: region:1172358-1200703:1
so has part: feature:1172358-1200703:1:exon
subclass of: SO_0000010

117723981
type: Gene
SIO_000068: ncbigene

position:1172358:1
position: 1172358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200703:1
position: 1200703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172358-1200703:1:exon

Nkd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nkd2
product: NKD inhibitor of WNT signaling pathway 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523592.1
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(1172358..1172437,1172538..1172652,1172924..1173570,1173667..1173702,1173956..1174059,1193224..1193284,1194397..1194524,1195083..1195178,1195890..1196034,1197402..1197486,1197935..1198062,1199262..1200703)
location: region:1172358-1200703:1
so has part: feature:1172358-1172437:1:exon
so has part: feature:1172538-1172652:1:exon
so has part: feature:1172924-1173570:1:exon
so has part: feature:1173667-1173702:1:exon
so has part: feature:1173956-1174059:1:exon
so has part: feature:1193224-1193284:1:exon
so has part: feature:1194397-1194524:1:exon
so has part: feature:1195083-1195178:1:exon
so has part: feature:1195890-1196034:1:exon
so has part: feature:1197402-1197486:1:exon
so has part: feature:1197935-1198062:1:exon
so has part: feature:1199262-1200703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172358-1172437:1:exon

position:1172437:1
position: 1172437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1172538-1172652:1:exon

position:1172538:1
position: 1172538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172652:1
position: 1172652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1172924-1173570:1:exon

position:1172924:1
position: 1172924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173570:1
position: 1173570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1173667-1173702:1:exon

position:1173667:1
position: 1173667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173702:1
position: 1173702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1173956-1174059:1:exon

position:1173956:1
position: 1173956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174059:1
position: 1174059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1193224-1193284:1:exon

position:1193224:1
position: 1193224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193284:1
position: 1193284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1194397-1194524:1:exon

position:1194397:1
position: 1194397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194524:1
position: 1194524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1195083-1195178:1:exon

position:1195083:1
position: 1195083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195178:1
position: 1195178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1195890-1196034:1:exon

position:1195890:1
position: 1195890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196034:1
position: 1196034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1197402-1197486:1:exon

position:1197402:1
position: 1197402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197486:1
position: 1197486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1197935-1198062:1:exon

position:1197935:1
position: 1197935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198062:1
position: 1198062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1199262-1200703:1:exon

position:1199262:1
position: 1199262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nkd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nkd2
product: NKD inhibitor of WNT signaling pathway 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523593.1
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(1172358..1172437,1172538..1172648,1172924..1173570,1173667..1173702,1173956..1174059,1193224..1193284,1194397..1194524,1195083..1195178,1195890..1196034,1197402..1197486,1197935..1198062,1199262..1200703)
location: region:1172358-1200703:1
so has part: feature:1172358-1172437:1:exon
so has part: feature:1172538-1172648:1:exon
so has part: feature:1172924-1173570:1:exon
so has part: feature:1173667-1173702:1:exon
so has part: feature:1173956-1174059:1:exon
so has part: feature:1193224-1193284:1:exon
so has part: feature:1194397-1194524:1:exon
so has part: feature:1195083-1195178:1:exon
so has part: feature:1195890-1196034:1:exon
so has part: feature:1197402-1197486:1:exon
so has part: feature:1197935-1198062:1:exon
so has part: feature:1199262-1200703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172358-1172437:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172538-1172648:1:exon

position:1172648:1
position: 1172648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1172924-1173570:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1173667-1173702:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173956-1174059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1193224-1193284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1194397-1194524:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1195083-1195178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1195890-1196034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197402-1197486:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1197935-1198062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1199262-1200703:1:exon

Nkd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nkd2
product: NKD inhibitor of WNT signaling pathway 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523594.1
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(1172533..1172652,1172924..1173570,1173667..1173702,1173956..1174059,1193224..1193284,1194397..1194524,1195083..1195178,1195890..1196034,1197402..1197486,1197935..1198062,1199262..1200703)
location: region:1172533-1200703:1
so has part: feature:1172533-1172652:1:exon
so has part: feature:1172924-1173570:1:exon
so has part: feature:1173667-1173702:1:exon
so has part: feature:1173956-1174059:1:exon
so has part: feature:1193224-1193284:1:exon
so has part: feature:1194397-1194524:1:exon
so has part: feature:1195083-1195178:1:exon
so has part: feature:1195890-1196034:1:exon
so has part: feature:1197402-1197486:1:exon
so has part: feature:1197935-1198062:1:exon
so has part: feature:1199262-1200703:1:exon

position:1172533:1
position: 1172533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172533-1172652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172924-1173570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173667-1173702:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1173956-1174059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1193224-1193284:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194397-1194524:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195083-1195178:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1195890-1196034:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197402-1197486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1197935-1198062:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1199262-1200703:1:exon

Nkd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nkd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein naked cuticle homolog 2 isoform X1
translation: MGKFQSKHAAAACKRRESPEGDSFVVSAYASSRKGAEENDRRAGSGVEHRARDKQELPNGDPKEGPFWEDKCSLEVVLPPEKTEGHEGQGHLFSSDDGEKAASREGPLRLGKKHLNIDALQCDVSVEEDNRQEWTFTLYDFDNSGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPSSKKECPITGQDREPVRGRTESELTDDPRVADRRLSAYSRKPNADPQPCSVRVPYCVDENTERRNHYLDLAGIENYTSKFGPGSPPEQARQEHHGRATHIPSRSRSQESDAHAVHHRRSQVLAEHVVPANEPATRALAAQPRLKGQEKQFLRSPKGPGKPLGAPSSSKPGKALSYCLQAVPLPQGAQDSHHLPQPPPQPPPQPYGHKRYRQKGREGHSPLKGHGQPTMVEHEVVRDLPPMLGPEGYVVPVIQRHEHHHHHEHHHHHHHHHFHPS
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(1173546..1173570,1173667..1173702,1173956..1174059,1193224..1193284,1194397..1194524,1195083..1195178,1195890..1196034,1197402..1197486,1197935..1198062,1199262..1199839)
location: region:1173546-1199839:1
so has part: feature:1173546-1173570:1:exon
so has part: feature:1173667-1173702:1:exon
so has part: feature:1173956-1174059:1:exon
so has part: feature:1193224-1193284:1:exon
so has part: feature:1194397-1194524:1:exon
so has part: feature:1195083-1195178:1:exon
so has part: feature:1195890-1196034:1:exon
so has part: feature:1197402-1197486:1:exon
so has part: feature:1197935-1198062:1:exon
so has part: feature:1199262-1199839:1:exon

XP_034379483.1
type: Protein
SIO_000068: ncbiprotein

position:1173546:1
position: 1173546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1199839:1
position: 1199839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173546-1173570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1173667-1173702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173956-1174059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1193224-1193284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194397-1194524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195083-1195178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195890-1196034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197402-1197486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197935-1198062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1199262-1199839:1:exon

Nkd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nkd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein naked cuticle homolog 2 isoform X1
translation: MGKFQSKHAAAACKRRESPEGDSFVVSAYASSRKGAEENDRRAGSGVEHRARDKQELPNGDPKEGPFWEDKCSLEVVLPPEKTEGHEGQGHLFSSDDGEKAASREGPLRLGKKHLNIDALQCDVSVEEDNRQEWTFTLYDFDNSGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPSSKKECPITGQDREPVRGRTESELTDDPRVADRRLSAYSRKPNADPQPCSVRVPYCVDENTERRNHYLDLAGIENYTSKFGPGSPPEQARQEHHGRATHIPSRSRSQESDAHAVHHRRSQVLAEHVVPANEPATRALAAQPRLKGQEKQFLRSPKGPGKPLGAPSSSKPGKALSYCLQAVPLPQGAQDSHHLPQPPPQPPPQPYGHKRYRQKGREGHSPLKGHGQPTMVEHEVVRDLPPMLGPEGYVVPVIQRHEHHHHHEHHHHHHHHHFHPS
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(1173546..1173570,1173667..1173702,1173956..1174059,1193224..1193284,1194397..1194524,1195083..1195178,1195890..1196034,1197402..1197486,1197935..1198062,1199262..1199839)
location: region:1173546-1199839:1
so has part: feature:1173546-1173570:1:exon
so has part: feature:1173667-1173702:1:exon
so has part: feature:1173956-1174059:1:exon
so has part: feature:1193224-1193284:1:exon
so has part: feature:1194397-1194524:1:exon
so has part: feature:1195083-1195178:1:exon
so has part: feature:1195890-1196034:1:exon
so has part: feature:1197402-1197486:1:exon
so has part: feature:1197935-1198062:1:exon
so has part: feature:1199262-1199839:1:exon

XP_034379484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1173546-1173570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1173667-1173702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173956-1174059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1193224-1193284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194397-1194524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195083-1195178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195890-1196034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197402-1197486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197935-1198062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1199262-1199839:1:exon

Nkd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nkd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein naked cuticle homolog 2 isoform X1
translation: MGKFQSKHAAAACKRRESPEGDSFVVSAYASSRKGAEENDRRAGSGVEHRARDKQELPNGDPKEGPFWEDKCSLEVVLPPEKTEGHEGQGHLFSSDDGEKAASREGPLRLGKKHLNIDALQCDVSVEEDNRQEWTFTLYDFDNSGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPSSKKECPITGQDREPVRGRTESELTDDPRVADRRLSAYSRKPNADPQPCSVRVPYCVDENTERRNHYLDLAGIENYTSKFGPGSPPEQARQEHHGRATHIPSRSRSQESDAHAVHHRRSQVLAEHVVPANEPATRALAAQPRLKGQEKQFLRSPKGPGKPLGAPSSSKPGKALSYCLQAVPLPQGAQDSHHLPQPPPQPPPQPYGHKRYRQKGREGHSPLKGHGQPTMVEHEVVRDLPPMLGPEGYVVPVIQRHEHHHHHEHHHHHHHHHFHPS
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(1173546..1173570,1173667..1173702,1173956..1174059,1193224..1193284,1194397..1194524,1195083..1195178,1195890..1196034,1197402..1197486,1197935..1198062,1199262..1199839)
location: region:1173546-1199839:1
so has part: feature:1173546-1173570:1:exon
so has part: feature:1173667-1173702:1:exon
so has part: feature:1173956-1174059:1:exon
so has part: feature:1193224-1193284:1:exon
so has part: feature:1194397-1194524:1:exon
so has part: feature:1195083-1195178:1:exon
so has part: feature:1195890-1196034:1:exon
so has part: feature:1197402-1197486:1:exon
so has part: feature:1197935-1198062:1:exon
so has part: feature:1199262-1199839:1:exon

XP_034379485.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1173546-1173570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1173667-1173702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173956-1174059:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1193224-1193284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194397-1194524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195083-1195178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195890-1196034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1197402-1197486:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197935-1198062:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1199262-1199839:1:exon

Nkd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nkd2
product: NKD inhibitor of WNT signaling pathway 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523595.1
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(1190429..1191108,1193224..1193284,1194397..1194524,1195083..1195178,1195890..1196034,1197402..1197486,1197935..1198062,1199262..1200703)
location: region:1190429-1200703:1
so has part: feature:1190429-1191108:1:exon
so has part: feature:1193224-1193284:1:exon
so has part: feature:1194397-1194524:1:exon
so has part: feature:1195083-1195178:1:exon
so has part: feature:1195890-1196034:1:exon
so has part: feature:1197402-1197486:1:exon
so has part: feature:1197935-1198062:1:exon
so has part: feature:1199262-1200703:1:exon

position:1190429:1
position: 1190429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190429-1191108:1:exon

position:1191108:1
position: 1191108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193224-1193284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1194397-1194524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195083-1195178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1195890-1196034:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197402-1197486:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197935-1198062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1199262-1200703:1:exon

Nkd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nkd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein naked cuticle homolog 2 isoform X2
translation: MFSWDKLELPNGDPKEGPFWEDKCSLEVVLPPEKTEGHEGQGHLFSSDDGEKAASREGPLRLGKKHLNIDALQCDVSVEEDNRQEWTFTLYDFDNSGKVTREDMSSLMHTIYEVVDASVNHSSGSSKTLRVKLTVSPEPSSKKECPITGQDREPVRGRTESELTDDPRVADRRLSAYSRKPNADPQPCSVRVPYCVDENTERRNHYLDLAGIENYTSKFGPGSPPEQARQEHHGRATHIPSRSRSQESDAHAVHHRRSQVLAEHVVPANEPATRALAAQPRLKGQEKQFLRSPKGPGKPLGAPSSSKPGKALSYCLQAVPLPQGAQDSHHLPQPPPQPPPQPYGHKRYRQKGREGHSPLKGHGQPTMVEHEVVRDLPPMLGPEGYVVPVIQRHEHHHHHEHHHHHHHHHFHPS
SIO_010081: Nkd2
subclass of: SO_0000673
so part of: Nkd2
location: join(1191088..1191108,1193224..1193284,1194397..1194524,1195083..1195178,1195890..1196034,1197402..1197486,1197935..1198062,1199262..1199839)
location: region:1191088-1199839:1
so has part: feature:1191088-1191108:1:exon
so has part: feature:1193224-1193284:1:exon
so has part: feature:1194397-1194524:1:exon
so has part: feature:1195083-1195178:1:exon
so has part: feature:1195890-1196034:1:exon
so has part: feature:1197402-1197486:1:exon
so has part: feature:1197935-1198062:1:exon
so has part: feature:1199262-1199839:1:exon

XP_034379486.1
type: Protein
SIO_000068: ncbiprotein

position:1191088:1
position: 1191088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1191088-1191108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1193224-1193284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1194397-1194524:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195083-1195178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1195890-1196034:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1197402-1197486:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1197935-1198062:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1199262-1199839:1:exon

Slc12a7
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slc12a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1203275..1258342)
location: region:1203275-1258342:-1
so has part: feature:1203275-1258342:-1:exon
subclass of: SO_0000010

117724004
type: Gene
SIO_000068: ncbigene

position:1203275:-1
position: 1203275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258342:-1
position: 1258342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203275-1258342:-1:exon

Slc12a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc12a7
product: solute carrier family 12 member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 31 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523626.1
SIO_010081: Slc12a7
subclass of: SO_0000673
so part of: Slc12a7
location: complement(join(1203275..1205046,1206433..1206566,1210322..1210500,1212748..1212855,1215252..1215383,1215490..1215659,1216085..1216280,1220894..1221062,1221536..1221640,1222342..1222461,1223026..1223124,1223518..1223636,1224336..1224510,1225239..1225296,1226546..1226644,1226946..1227113,1228057..1228268,1229361..1229602,1230945..1231075,1231736..1231790,1233071..1233217,1236534..1236656,1237080..1237174,1258162..1258342))
location: region:1203275-1258342:-1
so has part: feature:1258162-1258342:-1:exon
so has part: feature:1237080-1237174:-1:exon
so has part: feature:1236534-1236656:-1:exon
so has part: feature:1233071-1233217:-1:exon
so has part: feature:1231736-1231790:-1:exon
so has part: feature:1230945-1231075:-1:exon
so has part: feature:1229361-1229602:-1:exon
so has part: feature:1228057-1228268:-1:exon
so has part: feature:1226946-1227113:-1:exon
so has part: feature:1226546-1226644:-1:exon
so has part: feature:1225239-1225296:-1:exon
so has part: feature:1224336-1224510:-1:exon
so has part: feature:1223518-1223636:-1:exon
so has part: feature:1223026-1223124:-1:exon
so has part: feature:1222342-1222461:-1:exon
so has part: feature:1221536-1221640:-1:exon
so has part: feature:1220894-1221062:-1:exon
so has part: feature:1216085-1216280:-1:exon
so has part: feature:1215490-1215659:-1:exon
so has part: feature:1215252-1215383:-1:exon
so has part: feature:1212748-1212855:-1:exon
so has part: feature:1210322-1210500:-1:exon
so has part: feature:1206433-1206566:-1:exon
so has part: feature:1203275-1205046:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1258162-1258342:-1:exon

position:1258162:-1
position: 1258162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1237080-1237174:-1:exon

position:1237080:-1
position: 1237080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237174:-1
position: 1237174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1236534-1236656:-1:exon

position:1236534:-1
position: 1236534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236656:-1
position: 1236656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1233071-1233217:-1:exon

position:1233071:-1
position: 1233071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233217:-1
position: 1233217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1231736-1231790:-1:exon

position:1231736:-1
position: 1231736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231790:-1
position: 1231790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1230945-1231075:-1:exon

position:1230945:-1
position: 1230945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231075:-1
position: 1231075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1229361-1229602:-1:exon

position:1229361:-1
position: 1229361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229602:-1
position: 1229602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1228057-1228268:-1:exon

position:1228057:-1
position: 1228057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228268:-1
position: 1228268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1226946-1227113:-1:exon

position:1226946:-1
position: 1226946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227113:-1
position: 1227113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1226546-1226644:-1:exon

position:1226546:-1
position: 1226546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226644:-1
position: 1226644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1225239-1225296:-1:exon

position:1225239:-1
position: 1225239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225296:-1
position: 1225296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1224336-1224510:-1:exon

position:1224336:-1
position: 1224336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224510:-1
position: 1224510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1223518-1223636:-1:exon

position:1223518:-1
position: 1223518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223636:-1
position: 1223636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1223026-1223124:-1:exon

position:1223026:-1
position: 1223026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223124:-1
position: 1223124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1222342-1222461:-1:exon

position:1222342:-1
position: 1222342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222461:-1
position: 1222461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1221536-1221640:-1:exon

position:1221536:-1
position: 1221536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221640:-1
position: 1221640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1220894-1221062:-1:exon

position:1220894:-1
position: 1220894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221062:-1
position: 1221062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1216085-1216280:-1:exon

position:1216085:-1
position: 1216085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216280:-1
position: 1216280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1215490-1215659:-1:exon

position:1215490:-1
position: 1215490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215659:-1
position: 1215659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1215252-1215383:-1:exon

position:1215252:-1
position: 1215252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215383:-1
position: 1215383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1212748-1212855:-1:exon

position:1212748:-1
position: 1212748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212855:-1
position: 1212855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1210322-1210500:-1:exon

position:1210322:-1
position: 1210322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210500:-1
position: 1210500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1206433-1206566:-1:exon

position:1206433:-1
position: 1206433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206566:-1
position: 1206566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1203275-1205046:-1:exon

position:1205046:-1
position: 1205046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc12a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc12a7
product: solute carrier family 12 member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523624.1
SIO_010081: Slc12a7
subclass of: SO_0000673
so part of: Slc12a7
location: complement(join(1203275..1205046,1206433..1206566,1209401..1209415,1210322..1210500,1212748..1212855,1215252..1215383,1215490..1215659,1216085..1216280,1220894..1221062,1221536..1221640,1222342..1222461,1223026..1223124,1223518..1223636,1224336..1224510,1225239..1225296,1226546..1226644,1226946..1227113,1228057..1228268,1229361..1229602,1230945..1231075,1231736..1231790,1233071..1233217,1236534..1236656,1237080..1237174,1258162..1258339))
location: region:1203275-1258339:-1
so has part: feature:1258162-1258339:-1:exon
so has part: feature:1237080-1237174:-1:exon
so has part: feature:1236534-1236656:-1:exon
so has part: feature:1233071-1233217:-1:exon
so has part: feature:1231736-1231790:-1:exon
so has part: feature:1230945-1231075:-1:exon
so has part: feature:1229361-1229602:-1:exon
so has part: feature:1228057-1228268:-1:exon
so has part: feature:1226946-1227113:-1:exon
so has part: feature:1226546-1226644:-1:exon
so has part: feature:1225239-1225296:-1:exon
so has part: feature:1224336-1224510:-1:exon
so has part: feature:1223518-1223636:-1:exon
so has part: feature:1223026-1223124:-1:exon
so has part: feature:1222342-1222461:-1:exon
so has part: feature:1221536-1221640:-1:exon
so has part: feature:1220894-1221062:-1:exon
so has part: feature:1216085-1216280:-1:exon
so has part: feature:1215490-1215659:-1:exon
so has part: feature:1215252-1215383:-1:exon
so has part: feature:1212748-1212855:-1:exon
so has part: feature:1210322-1210500:-1:exon
so has part: feature:1209401-1209415:-1:exon
so has part: feature:1206433-1206566:-1:exon
so has part: feature:1203275-1205046:-1:exon

position:1258339:-1
position: 1258339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258162-1258339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237080-1237174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1236534-1236656:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233071-1233217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1231736-1231790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230945-1231075:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229361-1229602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1228057-1228268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1226946-1227113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1226546-1226644:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1225239-1225296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1224336-1224510:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1223518-1223636:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1223026-1223124:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1222342-1222461:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1221536-1221640:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1220894-1221062:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1216085-1216280:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1215490-1215659:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1215252-1215383:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1212748-1212855:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1210322-1210500:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1209401-1209415:-1:exon

position:1209401:-1
position: 1209401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209415:-1
position: 1209415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1206433-1206566:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1203275-1205046:-1:exon

Slc12a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc12a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 7 isoform X2
translation: MPTNFTVVPVEARADGAGDEAAERTEEPESPESADPASPTPGDGNPRENSPFINNVEVERENYFEGKNMALFEEEMDSNPMVSSLLNKLANYTNLSQGVVEHEEDEDSRRREIKAPRMGTFIGVYLPCLQNILGVILFLRLTWIVGAAGVLESFLIVSMCCTCTMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEIFLTYISPSAAIFQAETADGEAAALLNNMRVYGSCALALMAVVVFVGVKYVNKLALVFLACVVLSILAIYAGVIKTAFAPPDIPVCLLGNRTLANRNFDTCAKMQVVSNGTVTTALWRIFCNGSSLGATCDEYFAQNNVTEIQGIPGVASGVFLDNLWSAYSDKGAFVEKKGVSSVSVSEESRPGGLPYVLTDIMTYFTMLVGIYFPSVTGIMAGSNRSGDLKDAQKSIPTGTILAIVTTSFIYLSCIVLFGACIEGVVLRDKFGEALQGNLVIGMLAWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIARDGIIPFLQVFGHGKANGEPTWALLLTAVICETGILIASLDSVAPILSMFFLMCYMFVNLACAVQTLLRTPNWRPRFKFYHWTLSFLGMSLCLALMFICSWYYALFAMLIAGCIYKYIEYRGAEKEWGDGIRGLSLNAARYALLRVEHGPPHTKNWRPQVLVMLNLDSEQCVKHPRLLSFTSQLKAGKGLTIVGSVLEGTYLDKHVEAQRAEENIRSLMSAEKMKGFCQLVVSSNLRDGASHLIQSAGLGGMKHNTVLMAWPEAWKQADNPFSWKNFVDTVRDTTAAHQALLVAKNIDLFPQNQERFSDGNIDVWWIVHDGGMLMLLPFLLRQHKVWRKCRMRIFTVAQVDDNSIQMKKDLQMFLYHLRISAEVEVVEMVENDISAFTYEKTLMMEQRSQMLKQMQLSKNEREREAQLIHDRNTASHTTAAARTQAPLTPDKVQMTWTKEKLIAEKHRNKDTGTSGFKDLFSLKPDQSNVRRMHTAVKLNGVVLNKSQDAQLVLLNMPGPPKNRQGDENYMEFLEVLTEGLNRVLLVRGGGREVITIYS
SIO_010081: Slc12a7
subclass of: SO_0000673
so part of: Slc12a7
location: complement(join(1204955..1205046,1206433..1206566,1210322..1210500,1212748..1212855,1215252..1215383,1215490..1215659,1216085..1216280,1220894..1221062,1221536..1221640,1222342..1222461,1223026..1223124,1223518..1223636,1224336..1224510,1225239..1225296,1226546..1226644,1226946..1227113,1228057..1228268,1229361..1229602,1230945..1231075,1231736..1231790,1233071..1233217,1236534..1236656,1237080..1237174,1258162..1258285))
location: region:1204955-1258285:-1
so has part: feature:1258162-1258285:-1:exon
so has part: feature:1237080-1237174:-1:exon
so has part: feature:1236534-1236656:-1:exon
so has part: feature:1233071-1233217:-1:exon
so has part: feature:1231736-1231790:-1:exon
so has part: feature:1230945-1231075:-1:exon
so has part: feature:1229361-1229602:-1:exon
so has part: feature:1228057-1228268:-1:exon
so has part: feature:1226946-1227113:-1:exon
so has part: feature:1226546-1226644:-1:exon
so has part: feature:1225239-1225296:-1:exon
so has part: feature:1224336-1224510:-1:exon
so has part: feature:1223518-1223636:-1:exon
so has part: feature:1223026-1223124:-1:exon
so has part: feature:1222342-1222461:-1:exon
so has part: feature:1221536-1221640:-1:exon
so has part: feature:1220894-1221062:-1:exon
so has part: feature:1216085-1216280:-1:exon
so has part: feature:1215490-1215659:-1:exon
so has part: feature:1215252-1215383:-1:exon
so has part: feature:1212748-1212855:-1:exon
so has part: feature:1210322-1210500:-1:exon
so has part: feature:1206433-1206566:-1:exon
so has part: feature:1204955-1205046:-1:exon

XP_034379517.1
type: Protein
SIO_000068: ncbiprotein

position:1204955:-1
position: 1204955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258285:-1
position: 1258285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258162-1258285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237080-1237174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1236534-1236656:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233071-1233217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1231736-1231790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230945-1231075:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229361-1229602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1228057-1228268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1226946-1227113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1226546-1226644:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1225239-1225296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1224336-1224510:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1223518-1223636:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1223026-1223124:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1222342-1222461:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1221536-1221640:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1220894-1221062:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1216085-1216280:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1215490-1215659:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1215252-1215383:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1212748-1212855:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1210322-1210500:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1206433-1206566:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1204955-1205046:-1:exon

Slc12a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc12a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 12 member 7 isoform X1
translation: MPTNFTVVPVEARADGAGDEAAERTEEPESPESADPASPTPGDGNPRENSPFINNVEVERENYFEGKNMALFEEEMDSNPMVSSLLNKLANYTNLSQGVVEHEEDEDSRRREIKAPRMGTFIGVYLPCLQNILGVILFLRLTWIVGAAGVLESFLIVSMCCTCTMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGLCFYLGTTFAGAMYILGTIEIFLTYISPSAAIFQAETADGEAAALLNNMRVYGSCALALMAVVVFVGVKYVNKLALVFLACVVLSILAIYAGVIKTAFAPPDIPVCLLGNRTLANRNFDTCAKMQVVSNGTVTTALWRIFCNGSSLGATCDEYFAQNNVTEIQGIPGVASGVFLDNLWSAYSDKGAFVEKKGVSSVSVSEESRPGGLPYVLTDIMTYFTMLVGIYFPSVTGIMAGSNRSGDLKDAQKSIPTGTILAIVTTSFIYLSCIVLFGACIEGVVLRDKFGEALQGNLVIGMLAWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIARDGIIPFLQVFGHGKANGEPTWALLLTAVICETGILIASLDSVAPILSMFFLMCYMFVNLACAVQTLLRTPNWRPRFKFYHWTLSFLGMSLCLALMFICSWYYALFAMLIAGCIYKYIEYRGAEKEWGDGIRGLSLNAARYALLRVEHGPPHTKNWRPQVLVMLNLDSEQCVKHPRLLSFTSQLKAGKGLTIVGSVLEGTYLDKHVEAQRAEENIRSLMSAEKMKGFCQLVVSSNLRDGASHLIQSAGLGGMKHNTVLMAWPEAWKQADNPFSWKNFVDTVRDTTAAHQALLVAKNIDLFPQNQERFSDGNIDVWWIVHDGGMLMLLPFLLRQHKVWRKCRMRIFTVAQVDDNSIQMKKDLQMFLYHLRISAEVEVVEMVENDISAFTYEKTLMMEQRSQMLKQMQLSKNEREREAQLIHDRNTASHTTAAARTQAPLTPDKVQMTWTKEKLIAEKHRNKDTGTSGFKDLFSLKPEWGNLDQSNVRRMHTAVKLNGVVLNKSQDAQLVLLNMPGPPKNRQGDENYMEFLEVLTEGLNRVLLVRGGGREVITIYS
SIO_010081: Slc12a7
subclass of: SO_0000673
so part of: Slc12a7
location: complement(join(1204955..1205046,1206433..1206566,1209401..1209415,1210322..1210500,1212748..1212855,1215252..1215383,1215490..1215659,1216085..1216280,1220894..1221062,1221536..1221640,1222342..1222461,1223026..1223124,1223518..1223636,1224336..1224510,1225239..1225296,1226546..1226644,1226946..1227113,1228057..1228268,1229361..1229602,1230945..1231075,1231736..1231790,1233071..1233217,1236534..1236656,1237080..1237174,1258162..1258285))
location: region:1204955-1258285:-1
so has part: feature:1258162-1258285:-1:exon
so has part: feature:1237080-1237174:-1:exon
so has part: feature:1236534-1236656:-1:exon
so has part: feature:1233071-1233217:-1:exon
so has part: feature:1231736-1231790:-1:exon
so has part: feature:1230945-1231075:-1:exon
so has part: feature:1229361-1229602:-1:exon
so has part: feature:1228057-1228268:-1:exon
so has part: feature:1226946-1227113:-1:exon
so has part: feature:1226546-1226644:-1:exon
so has part: feature:1225239-1225296:-1:exon
so has part: feature:1224336-1224510:-1:exon
so has part: feature:1223518-1223636:-1:exon
so has part: feature:1223026-1223124:-1:exon
so has part: feature:1222342-1222461:-1:exon
so has part: feature:1221536-1221640:-1:exon
so has part: feature:1220894-1221062:-1:exon
so has part: feature:1216085-1216280:-1:exon
so has part: feature:1215490-1215659:-1:exon
so has part: feature:1215252-1215383:-1:exon
so has part: feature:1212748-1212855:-1:exon
so has part: feature:1210322-1210500:-1:exon
so has part: feature:1209401-1209415:-1:exon
so has part: feature:1206433-1206566:-1:exon
so has part: feature:1204955-1205046:-1:exon

XP_034379515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1258162-1258285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237080-1237174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1236534-1236656:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233071-1233217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1231736-1231790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1230945-1231075:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1229361-1229602:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1228057-1228268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1226946-1227113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1226546-1226644:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1225239-1225296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1224336-1224510:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1223518-1223636:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1223026-1223124:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1222342-1222461:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1221536-1221640:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1220894-1221062:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1216085-1216280:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1215490-1215659:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1215252-1215383:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1212748-1212855:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1210322-1210500:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1209401-1209415:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1206433-1206566:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1204955-1205046:-1:exon

LOC117723658
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723658
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1310131..1311186
location: region:1310131-1311186:1
so has part: feature:1310131-1311186:1:exon

117723658
type: Gene
SIO_000068: ncbigene

position:1310131:1
position: 1310131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1311186:1
position: 1311186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310131-1311186:1:exon

LOC117723658
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723658
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117723658
subclass of: SO_0000673
so part of: LOC117723658
location: 1310131..1310193
location: region:1310131-1310193:1
so has part: feature:1310131-1310193:1:exon

position:1310193:1
position: 1310193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310131-1310193:1:exon

LOC117723658
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723658
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117723658
subclass of: SO_0000673
so part of: LOC117723658
location: 1310554
location: region:1310554-1310554:1
so has part: feature:1310554-1310554:1:exon

position:1310554:1
position: 1310554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310554-1310554:1:exon

LOC117723658
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723658
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117723658
subclass of: SO_0000673
so part of: LOC117723658
location: 1310631..1310818
location: region:1310631-1310818:1
so has part: feature:1310631-1310818:1:exon

position:1310631:1
position: 1310631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310818:1
position: 1310818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310631-1310818:1:exon

LOC117723658
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723658
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117723658
subclass of: SO_0000673
so part of: LOC117723658
location: 1310958..1311186
location: region:1310958-1311186:1
so has part: feature:1310958-1311186:1:exon

position:1310958:1
position: 1310958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310958-1311186:1:exon

Slc6a19
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slc6a19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1324245..1345695
location: region:1324245-1345695:1
so has part: feature:1324245-1345695:1:exon
subclass of: SO_0000010

117723965
type: Gene
SIO_000068: ncbigene

position:1324245:1
position: 1324245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345695:1
position: 1345695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1324245-1345695:1:exon

Slc6a19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc6a19
product: solute carrier family 6 member 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 10 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523565.1
SIO_010081: Slc6a19
subclass of: SO_0000673
so part of: Slc6a19
location: join(1324245..1324593,1331696..1331836,1333046..1333183,1335487..1335668,1335773..1335883,1336218..1336330,1339180..1339308,1339449..1339605,1340977..1341181,1341299..1341458,1343262..1343424,1343592..1345695)
location: region:1324245-1345695:1
so has part: feature:1324245-1324593:1:exon
so has part: feature:1331696-1331836:1:exon
so has part: feature:1333046-1333183:1:exon
so has part: feature:1335487-1335668:1:exon
so has part: feature:1335773-1335883:1:exon
so has part: feature:1336218-1336330:1:exon
so has part: feature:1339180-1339308:1:exon
so has part: feature:1339449-1339605:1:exon
so has part: feature:1340977-1341181:1:exon
so has part: feature:1341299-1341458:1:exon
so has part: feature:1343262-1343424:1:exon
so has part: feature:1343592-1345695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1324245-1324593:1:exon

position:1324593:1
position: 1324593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1331696-1331836:1:exon

position:1331696:1
position: 1331696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331836:1
position: 1331836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1333046-1333183:1:exon

position:1333046:1
position: 1333046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333183:1
position: 1333183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1335487-1335668:1:exon

position:1335487:1
position: 1335487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335668:1
position: 1335668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1335773-1335883:1:exon

position:1335773:1
position: 1335773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335883:1
position: 1335883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1336218-1336330:1:exon

position:1336218:1
position: 1336218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336330:1
position: 1336330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1339180-1339308:1:exon

position:1339180:1
position: 1339180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339308:1
position: 1339308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1339449-1339605:1:exon

position:1339449:1
position: 1339449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339605:1
position: 1339605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1340977-1341181:1:exon

position:1340977:1
position: 1340977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341181:1
position: 1341181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1341299-1341458:1:exon

position:1341299:1
position: 1341299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341458:1
position: 1341458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1343262-1343424:1:exon

position:1343262:1
position: 1343262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343424:1
position: 1343424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1343592-1345695:1:exon

position:1343592:1
position: 1343592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc6a19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc6a19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent neutral amino acid transporter B(0)AT1 isoform X1
translation: MVRLVLPNPGLEDRIPSLDELEVIEKEEASSRPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGIPLLHLEFAIGQRLRKGSVGVWSSIHPALKGVGIASMFVSFMVGLYYNTIIAWVMWYFFNSFQEPLPWSECPLNQNQTGYVEECAKSSSVDYFWYRETLNISTSIDDSGSIQWWILLCLTCAWSVLYVCIIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKGATNGIVFLFTPNITELSNPNTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEMDSVIVSIINGFTSVYAATVVYSIIGFRATERFDDCVNMNILTLINGFDLPEGNVTSENFEAYQHWCNETNPEAYAQLKFQTCNINTFLSEGVEGTGLAFIVFTEAITKMPVSPLWSVLFFIMLFCLGLSSMFGNMEGVVVPLQDLNITPKKWPKELLTGLICLGTYLIAFIFTLNSGQYWLSLLDSYAGSIPLLVVAFCEMFAVVYVYGIDRFNKDIEFMIGHKPNIFWQVTWRVVSPLIMLVIFLFFFVIEVNKRLMYSIWDPDYEEFPKPQKVPYPNWVYAVVVIVAGVPCLTIPFFAIYKLIRNCCQKSGDHHGLVNTLSTASVNGDLKN
SIO_010081: Slc6a19
subclass of: SO_0000673
so part of: Slc6a19
location: join(1324392..1324593,1331696..1331836,1333046..1333183,1335487..1335668,1335773..1335883,1336218..1336330,1339180..1339308,1339449..1339605,1340977..1341181,1341299..1341458,1343262..1343424,1343592..1343795)
location: region:1324392-1343795:1
so has part: feature:1324392-1324593:1:exon
so has part: feature:1331696-1331836:1:exon
so has part: feature:1333046-1333183:1:exon
so has part: feature:1335487-1335668:1:exon
so has part: feature:1335773-1335883:1:exon
so has part: feature:1336218-1336330:1:exon
so has part: feature:1339180-1339308:1:exon
so has part: feature:1339449-1339605:1:exon
so has part: feature:1340977-1341181:1:exon
so has part: feature:1341299-1341458:1:exon
so has part: feature:1343262-1343424:1:exon
so has part: feature:1343592-1343795:1:exon

XP_034379456.1
type: Protein
SIO_000068: ncbiprotein

position:1324392:1
position: 1324392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343795:1
position: 1343795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1324392-1324593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1331696-1331836:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1333046-1333183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335487-1335668:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1335773-1335883:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1336218-1336330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1339180-1339308:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1339449-1339605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1340977-1341181:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1341299-1341458:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1343262-1343424:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1343592-1343795:1:exon

Slc6a19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc6a19
product: solute carrier family 6 member 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 2% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523566.1
SIO_010081: Slc6a19
subclass of: SO_0000673
so part of: Slc6a19
location: join(1332258..1332324,1333046..1333183,1335487..1335668,1335773..1335883,1336218..1336330,1339180..1339308,1339449..1339605,1340977..1341181,1341299..1341458,1343262..1343424,1343592..1345695)
location: region:1332258-1345695:1
so has part: feature:1332258-1332324:1:exon
so has part: feature:1333046-1333183:1:exon
so has part: feature:1335487-1335668:1:exon
so has part: feature:1335773-1335883:1:exon
so has part: feature:1336218-1336330:1:exon
so has part: feature:1339180-1339308:1:exon
so has part: feature:1339449-1339605:1:exon
so has part: feature:1340977-1341181:1:exon
so has part: feature:1341299-1341458:1:exon
so has part: feature:1343262-1343424:1:exon
so has part: feature:1343592-1345695:1:exon

position:1332258:1
position: 1332258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332258-1332324:1:exon

position:1332324:1
position: 1332324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1333046-1333183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1335487-1335668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335773-1335883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1336218-1336330:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1339180-1339308:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1339449-1339605:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340977-1341181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1341299-1341458:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1343262-1343424:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1343592-1345695:1:exon

Slc6a19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc6a19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent neutral amino acid transporter B(0)AT1 isoform X2
translation: MVQPPASLRGHGSLRAQNARKWCIASMFVSFMVGLYYNTIIAWVMWYFFNSFQEPLPWSECPLNQNQTGYVEECAKSSSVDYFWYRETLNISTSIDDSGSIQWWILLCLTCAWSVLYVCIIRGIETTGKAVYITSTLPYVVLTIFLIRGLTLKGATNGIVFLFTPNITELSNPNTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEMDSVIVSIINGFTSVYAATVVYSIIGFRATERFDDCVNMNILTLINGFDLPEGNVTSENFEAYQHWCNETNPEAYAQLKFQTCNINTFLSEGVEGTGLAFIVFTEAITKMPVSPLWSVLFFIMLFCLGLSSMFGNMEGVVVPLQDLNITPKKWPKELLTGLICLGTYLIAFIFTLNSGQYWLSLLDSYAGSIPLLVVAFCEMFAVVYVYGIDRFNKDIEFMIGHKPNIFWQVTWRVVSPLIMLVIFLFFFVIEVNKRLMYSIWDPDYEEFPKPQKVPYPNWVYAVVVIVAGVPCLTIPFFAIYKLIRNCCQKSGDHHGLVNTLSTASVNGDLKN
SIO_010081: Slc6a19
subclass of: SO_0000673
so part of: Slc6a19
location: join(1332258..1332324,1333046..1333183,1335487..1335668,1335773..1335883,1336218..1336330,1339180..1339308,1339449..1339605,1340977..1341181,1341299..1341458,1343262..1343424,1343592..1343795)
location: region:1332258-1343795:1
so has part: feature:1332258-1332324:1:exon
so has part: feature:1333046-1333183:1:exon
so has part: feature:1335487-1335668:1:exon
so has part: feature:1335773-1335883:1:exon
so has part: feature:1336218-1336330:1:exon
so has part: feature:1339180-1339308:1:exon
so has part: feature:1339449-1339605:1:exon
so has part: feature:1340977-1341181:1:exon
so has part: feature:1341299-1341458:1:exon
so has part: feature:1343262-1343424:1:exon
so has part: feature:1343592-1343795:1:exon

XP_034379457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1332258-1332324:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1333046-1333183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1335487-1335668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1335773-1335883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1336218-1336330:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1339180-1339308:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1339449-1339605:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1340977-1341181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1341299-1341458:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1343262-1343424:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1343592-1343795:1:exon

Slc6a18
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slc6a18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1347435..1362877
location: region:1347435-1362877:1
so has part: feature:1347435-1362877:1:exon
subclass of: SO_0000010

117723978
type: Gene
SIO_000068: ncbigene

position:1347435:1
position: 1347435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362877:1
position: 1362877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1347435-1362877:1:exon

Slc6a18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc6a18
product: solute carrier family 6 member 18, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein
transcript id: XM_034523589.1
SIO_010081: Slc6a18
subclass of: SO_0000673
so part of: Slc6a18
location: join(1347435..1347673,1349947..1350087,1350303..1350440,1351135..1351316,1352997..1353107,1354234..1354346,1355918..1356046,1357922..1358078,1359149..1359353,1359774..1359903,1361578..1362877)
location: region:1347435-1362877:1
so has part: feature:1347435-1347673:1:exon
so has part: feature:1349947-1350087:1:exon
so has part: feature:1350303-1350440:1:exon
so has part: feature:1351135-1351316:1:exon
so has part: feature:1352997-1353107:1:exon
so has part: feature:1354234-1354346:1:exon
so has part: feature:1355918-1356046:1:exon
so has part: feature:1357922-1358078:1:exon
so has part: feature:1359149-1359353:1:exon
so has part: feature:1359774-1359903:1:exon
so has part: feature:1361578-1362877:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1347435-1347673:1:exon

position:1347673:1
position: 1347673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1349947-1350087:1:exon

position:1349947:1
position: 1349947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350087:1
position: 1350087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1350303-1350440:1:exon

position:1350303:1
position: 1350303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1350440:1
position: 1350440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1351135-1351316:1:exon

position:1351135:1
position: 1351135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351316:1
position: 1351316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1352997-1353107:1:exon

position:1352997:1
position: 1352997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1353107:1
position: 1353107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1354234-1354346:1:exon

position:1354234:1
position: 1354234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1354346:1
position: 1354346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1355918-1356046:1:exon

position:1355918:1
position: 1355918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356046:1
position: 1356046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1357922-1358078:1:exon

position:1357922:1
position: 1357922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358078:1
position: 1358078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1359149-1359353:1:exon

position:1359149:1
position: 1359149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359353:1
position: 1359353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1359774-1359903:1:exon

position:1359774:1
position: 1359774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359903:1
position: 1359903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1361578-1362877:1:exon

position:1361578:1
position: 1361578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc6a18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc6a18
product: solute carrier family 6 member 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins
transcript id: XM_034523586.1
SIO_010081: Slc6a18
subclass of: SO_0000673
so part of: Slc6a18
location: join(1347446..1347673,1349947..1350087,1350303..1350440,1351135..1351316,1352997..1353107,1354234..1354346,1355918..1356046,1357922..1358078,1359149..1359353,1359744..1359903,1360119..1360281,1361578..1361853)
location: region:1347446-1361853:1
so has part: feature:1347446-1347673:1:exon
so has part: feature:1349947-1350087:1:exon
so has part: feature:1350303-1350440:1:exon
so has part: feature:1351135-1351316:1:exon
so has part: feature:1352997-1353107:1:exon
so has part: feature:1354234-1354346:1:exon
so has part: feature:1355918-1356046:1:exon
so has part: feature:1357922-1358078:1:exon
so has part: feature:1359149-1359353:1:exon
so has part: feature:1359744-1359903:1:exon
so has part: feature:1360119-1360281:1:exon
so has part: feature:1361578-1361853:1:exon

position:1347446:1
position: 1347446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361853:1
position: 1361853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1347446-1347673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349947-1350087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350303-1350440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351135-1351316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352997-1353107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354234-1354346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355918-1356046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357922-1358078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1359149-1359353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359744-1359903:1:exon

position:1359744:1
position: 1359744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1360119-1360281:1:exon

position:1360119:1
position: 1360119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360281:1
position: 1360281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1361578-1361853:1:exon

Slc6a18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc6a18
product: solute carrier family 6 member 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein
transcript id: XM_034523587.1
SIO_010081: Slc6a18
subclass of: SO_0000673
so part of: Slc6a18
location: join(1347446..1347673,1349947..1350087,1350303..1350440,1351135..1351316,1352997..1353107,1354234..1354346,1355918..1356046,1357922..1358078,1359149..1359353,1359774..1359903,1360119..1360281,1361578..1361853)
location: region:1347446-1361853:1
so has part: feature:1347446-1347673:1:exon
so has part: feature:1349947-1350087:1:exon
so has part: feature:1350303-1350440:1:exon
so has part: feature:1351135-1351316:1:exon
so has part: feature:1352997-1353107:1:exon
so has part: feature:1354234-1354346:1:exon
so has part: feature:1355918-1356046:1:exon
so has part: feature:1357922-1358078:1:exon
so has part: feature:1359149-1359353:1:exon
so has part: feature:1359774-1359903:1:exon
so has part: feature:1360119-1360281:1:exon
so has part: feature:1361578-1361853:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1347446-1347673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349947-1350087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350303-1350440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351135-1351316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352997-1353107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354234-1354346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355918-1356046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357922-1358078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1359149-1359353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359774-1359903:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1360119-1360281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1361578-1361853:1:exon

Slc6a18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc6a18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive sodium-dependent neutral amino acid transporter B(0)AT3 isoform X1
translation: MAQASGMDPLVDIEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQDPLPWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLTYLFTPNMKILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASITIFSIMGFKASNDYGRCLDRNILSLINEFDFPEFSISRDEYQSVLMYLNATQAERVARLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGAPVWSVLFFGMLFTLGLSSMFGNMEGVITPLLDMGILPKGIPKEAMTGVACLICFLSAICFTLQSGSYWLEIFDSFAASLNLIIFAFMEVVGVIHVYGIKRFCDDIEWMTGRRPSLYWQVTWRVVSPMLLFGIFLSYIVLLAQTPPSYKAWNPQYEHFPSREEKLYPGWVQVICVILSFLPSLWIPGVALAQLLSQYRQRWRETHLESGLKLQESRGC
SIO_010081: Slc6a18
subclass of: SO_0000673
so part of: Slc6a18
location: join(1347517..1347673,1349947..1350087,1350303..1350440,1351135..1351316,1352997..1353107,1354234..1354346,1355918..1356046,1357922..1358078,1359149..1359353,1359744..1359903,1360119..1360281,1361578..1361769)
location: region:1347517-1361769:1
so has part: feature:1347517-1347673:1:exon
so has part: feature:1349947-1350087:1:exon
so has part: feature:1350303-1350440:1:exon
so has part: feature:1351135-1351316:1:exon
so has part: feature:1352997-1353107:1:exon
so has part: feature:1354234-1354346:1:exon
so has part: feature:1355918-1356046:1:exon
so has part: feature:1357922-1358078:1:exon
so has part: feature:1359149-1359353:1:exon
so has part: feature:1359744-1359903:1:exon
so has part: feature:1360119-1360281:1:exon
so has part: feature:1361578-1361769:1:exon

XP_034379477.1
type: Protein
SIO_000068: ncbiprotein

position:1347517:1
position: 1347517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361769:1
position: 1361769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1347517-1347673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349947-1350087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350303-1350440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351135-1351316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352997-1353107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354234-1354346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355918-1356046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357922-1358078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1359149-1359353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359744-1359903:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1360119-1360281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1361578-1361769:1:exon

Slc6a18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc6a18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive sodium-dependent neutral amino acid transporter B(0)AT3 isoform X2
translation: MAQASGMDPLVDIEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQDPLPWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLTYLFTPNMKILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASITIFSIMGFKASNDYGRCLDRNILSLINEFDFPEFSISRDEYQSVLMYLNATQAERVARLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGAPVWSVLFFGMLFTLGLSSMFGNMEGVITPLLDMGILPKGIPKEAMTAICFTLQSGSYWLEIFDSFAASLNLIIFAFMEVVGVIHVYGIKRFCDDIEWMTGRRPSLYWQVTWRVVSPMLLFGIFLSYIVLLAQTPPSYKAWNPQYEHFPSREEKLYPGWVQVICVILSFLPSLWIPGVALAQLLSQYRQRWRETHLESGLKLQESRGC
SIO_010081: Slc6a18
subclass of: SO_0000673
so part of: Slc6a18
location: join(1347517..1347673,1349947..1350087,1350303..1350440,1351135..1351316,1352997..1353107,1354234..1354346,1355918..1356046,1357922..1358078,1359149..1359353,1359774..1359903,1360119..1360281,1361578..1361769)
location: region:1347517-1361769:1
so has part: feature:1347517-1347673:1:exon
so has part: feature:1349947-1350087:1:exon
so has part: feature:1350303-1350440:1:exon
so has part: feature:1351135-1351316:1:exon
so has part: feature:1352997-1353107:1:exon
so has part: feature:1354234-1354346:1:exon
so has part: feature:1355918-1356046:1:exon
so has part: feature:1357922-1358078:1:exon
so has part: feature:1359149-1359353:1:exon
so has part: feature:1359774-1359903:1:exon
so has part: feature:1360119-1360281:1:exon
so has part: feature:1361578-1361769:1:exon

XP_034379478.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1347517-1347673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349947-1350087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350303-1350440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351135-1351316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352997-1353107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354234-1354346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355918-1356046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357922-1358078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1359149-1359353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359774-1359903:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1360119-1360281:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1361578-1361769:1:exon

Slc6a18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc6a18
product: solute carrier family 6 member 18, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034523588.1
SIO_010081: Slc6a18
subclass of: SO_0000673
so part of: Slc6a18
location: join(1347517..1347673,1349947..1350087,1350303..1350440,1351135..1351316,1352997..1353107,1354234..1354346,1355918..1356046,1357922..1358078,1359149..1359353,1359744..1359903,1361578..1361638)
location: region:1347517-1361638:1
so has part: feature:1347517-1347673:1:exon
so has part: feature:1349947-1350087:1:exon
so has part: feature:1350303-1350440:1:exon
so has part: feature:1351135-1351316:1:exon
so has part: feature:1352997-1353107:1:exon
so has part: feature:1354234-1354346:1:exon
so has part: feature:1355918-1356046:1:exon
so has part: feature:1357922-1358078:1:exon
so has part: feature:1359149-1359353:1:exon
so has part: feature:1359744-1359903:1:exon
so has part: feature:1361578-1361638:1:exon

position:1361638:1
position: 1361638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1347517-1347673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349947-1350087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350303-1350440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351135-1351316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352997-1353107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354234-1354346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355918-1356046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357922-1358078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1359149-1359353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359744-1359903:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1361578-1361638:1:exon

Slc6a18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc6a18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive sodium-dependent neutral amino acid transporter B(0)AT3 isoform X3
translation: MAQASGMDPLVDIEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQDPLPWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLTYLFTPNMKILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASITIFSIMGFKASNDYGRCLDRNILSLINEFDFPEFSISRDEYQSVLMYLNATQAERVARLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGAPVWSVLFFGMLFTLGLSSMFGNMEGVITPLLDMGILPKGIPKEAMTGVACLICFLSAICFTLQSGSYWLEIFDSFAASLNLIIFAFMEVVGVIHVYGIKRNIFPQERRSSIQAGCRSSV
SIO_010081: Slc6a18
subclass of: SO_0000673
so part of: Slc6a18
location: join(1347517..1347673,1349947..1350087,1350303..1350440,1351135..1351316,1352997..1353107,1354234..1354346,1355918..1356046,1357922..1358078,1359149..1359353,1359744..1359903,1361578..1361638)
location: region:1347517-1361638:1
so has part: feature:1347517-1347673:1:exon
so has part: feature:1349947-1350087:1:exon
so has part: feature:1350303-1350440:1:exon
so has part: feature:1351135-1351316:1:exon
so has part: feature:1352997-1353107:1:exon
so has part: feature:1354234-1354346:1:exon
so has part: feature:1355918-1356046:1:exon
so has part: feature:1357922-1358078:1:exon
so has part: feature:1359149-1359353:1:exon
so has part: feature:1359744-1359903:1:exon
so has part: feature:1361578-1361638:1:exon

XP_034379479.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1347517-1347673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349947-1350087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350303-1350440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351135-1351316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352997-1353107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354234-1354346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355918-1356046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357922-1358078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1359149-1359353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359744-1359903:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1361578-1361638:1:exon

Slc6a18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc6a18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive sodium-dependent neutral amino acid transporter B(0)AT3 isoform X4
translation: MAQASGMDPLVDIEDERPKWDNKLQYLLSCIGFAVGLGNIWRFPYLCQTHGGGAFLIPYFIALVFEGIPLFYIELAIGQRLRRGSIGVWKTISPYLGGVGLGCFSVSFLVSLYYNTVLLWVLWFFLNSFQDPLPWSTCPLDLNRTGFVQECQSSGTVSYFWYRQTLNITSDISNTGTIQWKLFLCLVACWTTVYLCVIRGIESTGKVIYFTALFPYLVLTIFLIRGLTLPGATEGLTYLFTPNMKILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNPPRNNCEKDAVIIALVNSMTSLYASITIFSIMGFKASNDYGRCLDRNILSLINEFDFPEFSISRDEYQSVLMYLNATQAERVARLPLKTCHLEDFLDKSASGPGLAFIVFTEAVLHMPGAPVWSVLFFGMLFTLGLSSMFGNMEGVITPLLDMGILPKGIPKEAMTAICFTLQSGSYWLEIFDSFAASLNLIIFAFMEVVGVIHVYGIKRNIFPQERRSSIQAGCRSSV
SIO_010081: Slc6a18
subclass of: SO_0000673
so part of: Slc6a18
location: join(1347517..1347673,1349947..1350087,1350303..1350440,1351135..1351316,1352997..1353107,1354234..1354346,1355918..1356046,1357922..1358078,1359149..1359353,1359774..1359903,1361578..1361638)
location: region:1347517-1361638:1
so has part: feature:1347517-1347673:1:exon
so has part: feature:1349947-1350087:1:exon
so has part: feature:1350303-1350440:1:exon
so has part: feature:1351135-1351316:1:exon
so has part: feature:1352997-1353107:1:exon
so has part: feature:1354234-1354346:1:exon
so has part: feature:1355918-1356046:1:exon
so has part: feature:1357922-1358078:1:exon
so has part: feature:1359149-1359353:1:exon
so has part: feature:1359774-1359903:1:exon
so has part: feature:1361578-1361638:1:exon

XP_034379480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1347517-1347673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1349947-1350087:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1350303-1350440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1351135-1351316:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352997-1353107:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1354234-1354346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1355918-1356046:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1357922-1358078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1359149-1359353:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1359774-1359903:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1361578-1361638:1:exon

Tert
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tert
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1374528..1394968)
location: region:1374528-1394968:-1
so has part: feature:1374528-1394968:-1:exon
subclass of: SO_0000010

117723948
type: Gene
SIO_000068: ncbigene

position:1374528:-1
position: 1374528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394968:-1
position: 1394968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374528-1394968:-1:exon

Tert
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tert
product: telomerase reverse transcriptase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523546.1
SIO_010081: Tert
subclass of: SO_0000673
so part of: Tert
location: complement(join(1374528..1375066,1375531..1375668,1375858..1375982,1377064..1377125,1377617..1377743,1379430..1379618,1380056..1380127,1380388..1380501,1382780..1382865,1383600..1383701,1385266..1385424,1386120..1386299,1386925..1387099,1388681..1388876,1393333..1394656,1394750..1394968))
location: region:1374528-1394968:-1
so has part: feature:1394750-1394968:-1:exon
so has part: feature:1393333-1394656:-1:exon
so has part: feature:1388681-1388876:-1:exon
so has part: feature:1386925-1387099:-1:exon
so has part: feature:1386120-1386299:-1:exon
so has part: feature:1385266-1385424:-1:exon
so has part: feature:1383600-1383701:-1:exon
so has part: feature:1382780-1382865:-1:exon
so has part: feature:1380388-1380501:-1:exon
so has part: feature:1380056-1380127:-1:exon
so has part: feature:1379430-1379618:-1:exon
so has part: feature:1377617-1377743:-1:exon
so has part: feature:1377064-1377125:-1:exon
so has part: feature:1375858-1375982:-1:exon
so has part: feature:1375531-1375668:-1:exon
so has part: feature:1374528-1375066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1394750-1394968:-1:exon

position:1394750:-1
position: 1394750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1393333-1394656:-1:exon

position:1393333:-1
position: 1393333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394656:-1
position: 1394656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1388681-1388876:-1:exon

position:1388681:-1
position: 1388681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1388876:-1
position: 1388876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1386925-1387099:-1:exon

position:1386925:-1
position: 1386925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387099:-1
position: 1387099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1386120-1386299:-1:exon

position:1386120:-1
position: 1386120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386299:-1
position: 1386299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1385266-1385424:-1:exon

position:1385266:-1
position: 1385266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385424:-1
position: 1385424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1383600-1383701:-1:exon

position:1383600:-1
position: 1383600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383701:-1
position: 1383701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1382780-1382865:-1:exon

position:1382780:-1
position: 1382780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382865:-1
position: 1382865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1380388-1380501:-1:exon

position:1380388:-1
position: 1380388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380501:-1
position: 1380501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1380056-1380127:-1:exon

position:1380056:-1
position: 1380056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380127:-1
position: 1380127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1379430-1379618:-1:exon

position:1379430:-1
position: 1379430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379618:-1
position: 1379618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1377617-1377743:-1:exon

position:1377617:-1
position: 1377617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377743:-1
position: 1377743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1377064-1377125:-1:exon

position:1377064:-1
position: 1377064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377125:-1
position: 1377125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1375858-1375982:-1:exon

position:1375858:-1
position: 1375858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375982:-1
position: 1375982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1375531-1375668:-1:exon

position:1375531:-1
position: 1375531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375668:-1
position: 1375668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1374528-1375066:-1:exon

position:1375066:-1
position: 1375066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tert
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tert
product: telomerase reverse transcriptase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523548.1
SIO_010081: Tert
subclass of: SO_0000673
so part of: Tert
location: complement(join(1374528..1375066,1375531..1375668,1375858..1375982,1377064..1377125,1377617..1377743,1379430..1379618,1380056..1380127,1380388..1380501,1382780..1382865,1383600..1383701,1385266..1385424,1386120..1386299,1386925..1387099,1388681..1388876,1393333..1393754,1394369..1394422))
location: region:1374528-1394422:-1
so has part: feature:1394369-1394422:-1:exon
so has part: feature:1393333-1393754:-1:exon
so has part: feature:1388681-1388876:-1:exon
so has part: feature:1386925-1387099:-1:exon
so has part: feature:1386120-1386299:-1:exon
so has part: feature:1385266-1385424:-1:exon
so has part: feature:1383600-1383701:-1:exon
so has part: feature:1382780-1382865:-1:exon
so has part: feature:1380388-1380501:-1:exon
so has part: feature:1380056-1380127:-1:exon
so has part: feature:1379430-1379618:-1:exon
so has part: feature:1377617-1377743:-1:exon
so has part: feature:1377064-1377125:-1:exon
so has part: feature:1375858-1375982:-1:exon
so has part: feature:1375531-1375668:-1:exon
so has part: feature:1374528-1375066:-1:exon

position:1394422:-1
position: 1394422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1394369-1394422:-1:exon

position:1394369:-1
position: 1394369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1393333-1393754:-1:exon

position:1393754:-1
position: 1393754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1388681-1388876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1386925-1387099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1386120-1386299:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1385266-1385424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1383600-1383701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1382780-1382865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1380388-1380501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1380056-1380127:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1379430-1379618:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1377617-1377743:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1377064-1377125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1375858-1375982:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1375531-1375668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1374528-1375066:-1:exon

Tert
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tert
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase reverse transcriptase isoform X1
translation: MTRAPRCPAVRSLLRSRYREVWPLATFVRRLGPEGRRLVQPGDPKVFRTLVAQCLVCVPWGSQPPPADLSFQQVSSLKELVARVVQRLCERNERNVLAFGFALLNGARGGPPIAFTTGVRSYLPNTVTETLRVSGAWMLLLSRVGDDLLVYLLAHCALYLLVPPSCAYQVCGTPLYQICATRDTWPSVSASNRPTRAMGGNFTNLGSAHQIKTSSHQEALKPLALPSRGTKRHLSLTGTSVPSAKKVRFDPTLRVEDGPHRQVVPTPSGKTWVPSPAESPKVPTAEKNLSSKGKASDLSLSGSVYCKHKASPIFLLSSPPQNAFQLRPFTETRHFLYSRGGGQEGLNPSFLLNNLQPSLTGARRLVEIIFLGSRSRTSGPLCRTHRLPSRYWQMRPLFQQLLVNHAECQYVRLLRSHCRFRTANQRVTDTLNTSPQYLMNLLRLHSSPWQVYGFLRACLQKVVPAGLWGTRHNERRFFKNVKKFVSLGKYAKLSLQELMWKMKVEDCLWLRSSPGKDCVPAAEHRLRERILAMFLFWLMDTYVVQLLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGVRQHLERVQLRELSQEEVRQHQDTWLAIPICRLRFIPKPNSLRPIVNMSYSMSTKAFGKKAQHFTQRLKTLFSMLNYERTKHPNLMGASVLGMNDIYRTWRTFVLRVRALDQTPRMYFVKADVTGAYDTIPQDKLLEVVANIIRHSESMYCMRQYAVVRRDSQGQVHKSFRRQVSTLSDFQPYMSQFVKHLQDSDASALRNSVVIEQSISLNETSSGLLDFFLHFVRHSVMKIGGRYYMQCQGIPQGSILSTLLCSLCFGDMENKLFAEIQQDGLLLRFVDDFLLVTPHLAQAKAFLSTLVRGVPEYGCMINLQKTVVNFPVETGTLDGAVPHQLPAHCLFPWCGLLLDTQTLEVFCDYSGYARTSIKTSLTFQSVFKAGKTMRYKLLSVLRLKCHSLFLDLQVNSLQTVCINIYKIFLLQAYRFHACVTQLPFDQNVRKNLAFFLDIISNQASCCYAILKVKNPGVKLKAKNASGSFPPEAARWLCYRAFLLKLAAHSVIYKCLLGPLRTAQKQLCRKLSEATMTILKAAADPALSTDFQTILD
SIO_010081: Tert
subclass of: SO_0000673
so part of: Tert
location: complement(join(1374963..1375066,1375531..1375668,1375858..1375982,1377064..1377125,1377617..1377743,1379430..1379618,1380056..1380127,1380388..1380501,1382780..1382865,1383600..1383701,1385266..1385424,1386120..1386299,1386925..1387099,1388681..1388876,1393333..1394656,1394750..1394968))
location: region:1374963-1394968:-1
so has part: feature:1394750-1394968:-1:exon
so has part: feature:1393333-1394656:-1:exon
so has part: feature:1388681-1388876:-1:exon
so has part: feature:1386925-1387099:-1:exon
so has part: feature:1386120-1386299:-1:exon
so has part: feature:1385266-1385424:-1:exon
so has part: feature:1383600-1383701:-1:exon
so has part: feature:1382780-1382865:-1:exon
so has part: feature:1380388-1380501:-1:exon
so has part: feature:1380056-1380127:-1:exon
so has part: feature:1379430-1379618:-1:exon
so has part: feature:1377617-1377743:-1:exon
so has part: feature:1377064-1377125:-1:exon
so has part: feature:1375858-1375982:-1:exon
so has part: feature:1375531-1375668:-1:exon
so has part: feature:1374963-1375066:-1:exon

XP_034379437.1
type: Protein
SIO_000068: ncbiprotein

position:1374963:-1
position: 1374963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1394750-1394968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1393333-1394656:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388681-1388876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1386925-1387099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1386120-1386299:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1385266-1385424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1383600-1383701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1382780-1382865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1380388-1380501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1380056-1380127:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1379430-1379618:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1377617-1377743:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1377064-1377125:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1375858-1375982:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1375531-1375668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1374963-1375066:-1:exon

Tert
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tert
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase reverse transcriptase isoform X2
translation: MRPLFQQLLVNHAECQYVRLLRSHCRFRTANQRVTDTLNTSPQYLMNLLRLHSSPWQVYGFLRACLQKVVPAGLWGTRHNERRFFKNVKKFVSLGKYAKLSLQELMWKMKVEDCLWLRSSPGKDCVPAAEHRLRERILAMFLFWLMDTYVVQLLRSFFYVTETTFQKNRLFFYRKSVWSKLQSIGVRQHLERVQLRELSQEEVRQHQDTWLAIPICRLRFIPKPNSLRPIVNMSYSMSTKAFGKKAQHFTQRLKTLFSMLNYERTKHPNLMGASVLGMNDIYRTWRTFVLRVRALDQTPRMYFVKADVTGAYDTIPQDKLLEVVANIIRHSESMYCMRQYAVVRRDSQGQVHKSFRRQVSTLSDFQPYMSQFVKHLQDSDASALRNSVVIEQSISLNETSSGLLDFFLHFVRHSVMKIGGRYYMQCQGIPQGSILSTLLCSLCFGDMENKLFAEIQQDGLLLRFVDDFLLVTPHLAQAKAFLSTLVRGVPEYGCMINLQKTVVNFPVETGTLDGAVPHQLPAHCLFPWCGLLLDTQTLEVFCDYSGYARTSIKTSLTFQSVFKAGKTMRYKLLSVLRLKCHSLFLDLQVNSLQTVCINIYKIFLLQAYRFHACVTQLPFDQNVRKNLAFFLDIISNQASCCYAILKVKNPGVKLKAKNASGSFPPEAARWLCYRAFLLKLAAHSVIYKCLLGPLRTAQKQLCRKLSEATMTILKAAADPALSTDFQTILD
SIO_010081: Tert
subclass of: SO_0000673
so part of: Tert
location: complement(join(1374963..1375066,1375531..1375668,1375858..1375982,1377064..1377125,1377617..1377743,1379430..1379618,1380056..1380127,1380388..1380501,1382780..1382865,1383600..1383701,1385266..1385424,1386120..1386299,1386925..1387099,1388681..1388876,1393333..1393696))
location: region:1374963-1393696:-1
so has part: feature:1393333-1393696:-1:exon
so has part: feature:1388681-1388876:-1:exon
so has part: feature:1386925-1387099:-1:exon
so has part: feature:1386120-1386299:-1:exon
so has part: feature:1385266-1385424:-1:exon
so has part: feature:1383600-1383701:-1:exon
so has part: feature:1382780-1382865:-1:exon
so has part: feature:1380388-1380501:-1:exon
so has part: feature:1380056-1380127:-1:exon
so has part: feature:1379430-1379618:-1:exon
so has part: feature:1377617-1377743:-1:exon
so has part: feature:1377064-1377125:-1:exon
so has part: feature:1375858-1375982:-1:exon
so has part: feature:1375531-1375668:-1:exon
so has part: feature:1374963-1375066:-1:exon

XP_034379439.1
type: Protein
SIO_000068: ncbiprotein

position:1393696:-1
position: 1393696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393333-1393696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1388681-1388876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1386925-1387099:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1386120-1386299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1385266-1385424:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1383600-1383701:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1382780-1382865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1380388-1380501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1380056-1380127:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1379430-1379618:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1377617-1377743:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1377064-1377125:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1375858-1375982:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1375531-1375668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1374963-1375066:-1:exon

Clptm1l
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Clptm1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1403371..1420564)
location: region:1403371-1420564:-1
so has part: feature:1403371-1420564:-1:exon
subclass of: SO_0000010

117723890
type: Gene
SIO_000068: ncbigene

position:1403371:-1
position: 1403371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420564:-1
position: 1420564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403371-1420564:-1:exon

Clptm1l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clptm1l
product: CLPTM1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 4 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523472.1
SIO_010081: Clptm1l
subclass of: SO_0000673
so part of: Clptm1l
location: complement(join(1403371..1403937,1405745..1405860,1406505..1406549,1406636..1406691,1407374..1407408,1408206..1408288,1409009..1409059,1409536..1409601,1410759..1410862,1412003..1412087,1412734..1412828,1413197..1413314,1415594..1415672,1416719..1416867,1418199..1418388,1419547..1419647,1420173..1420564))
location: region:1403371-1420564:-1
so has part: feature:1420173-1420564:-1:exon
so has part: feature:1419547-1419647:-1:exon
so has part: feature:1418199-1418388:-1:exon
so has part: feature:1416719-1416867:-1:exon
so has part: feature:1415594-1415672:-1:exon
so has part: feature:1413197-1413314:-1:exon
so has part: feature:1412734-1412828:-1:exon
so has part: feature:1412003-1412087:-1:exon
so has part: feature:1410759-1410862:-1:exon
so has part: feature:1409536-1409601:-1:exon
so has part: feature:1409009-1409059:-1:exon
so has part: feature:1408206-1408288:-1:exon
so has part: feature:1407374-1407408:-1:exon
so has part: feature:1406636-1406691:-1:exon
so has part: feature:1406505-1406549:-1:exon
so has part: feature:1405745-1405860:-1:exon
so has part: feature:1403371-1403937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1420173-1420564:-1:exon

position:1420173:-1
position: 1420173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1419547-1419647:-1:exon

position:1419547:-1
position: 1419547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419647:-1
position: 1419647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1418199-1418388:-1:exon

position:1418199:-1
position: 1418199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418388:-1
position: 1418388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1416719-1416867:-1:exon

position:1416719:-1
position: 1416719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416867:-1
position: 1416867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1415594-1415672:-1:exon

position:1415594:-1
position: 1415594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415672:-1
position: 1415672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1413197-1413314:-1:exon

position:1413197:-1
position: 1413197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413314:-1
position: 1413314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1412734-1412828:-1:exon

position:1412734:-1
position: 1412734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412828:-1
position: 1412828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1412003-1412087:-1:exon

position:1412003:-1
position: 1412003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412087:-1
position: 1412087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1410759-1410862:-1:exon

position:1410759:-1
position: 1410759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410862:-1
position: 1410862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1409536-1409601:-1:exon

position:1409536:-1
position: 1409536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409601:-1
position: 1409601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1409009-1409059:-1:exon

position:1409009:-1
position: 1409009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1409059:-1
position: 1409059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1408206-1408288:-1:exon

position:1408206:-1
position: 1408206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408288:-1
position: 1408288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1407374-1407408:-1:exon

position:1407374:-1
position: 1407374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1407408:-1
position: 1407408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1406636-1406691:-1:exon

position:1406636:-1
position: 1406636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406691:-1
position: 1406691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1406505-1406549:-1:exon

position:1406505:-1
position: 1406505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406549:-1
position: 1406549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1405745-1405860:-1:exon

position:1405745:-1
position: 1405745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1405860:-1
position: 1405860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1403371-1403937:-1:exon

position:1403937:-1
position: 1403937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Clptm1l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clptm1l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleft lip and palate transmembrane protein 1-like protein
translation: MWSGRSSFTSLVVGVFVVYVVHTCWVMYGIVYTRPCSGDANCIQPYLARRPKLQLSVYTTTRSSLGAENNVDLVLNVEDFDVESKFERTVNVSVPKKTRNNGTLYAYIFLHHAGILPWQDGKQVHVVSTLTTYMIPKPEEINLLTGESATQQEIEAEKKPSNALDEPVSHWRPRLTLNVMVDDFVFDGSSLPADVHRYMKMIQLGKTVHYLPILFIDQLSNRVKDLMVINRSTTELPLTVSYDKISLGRLRFWIHMQDAVYSLQQFGFSEKDADELKGIFVDTNLYLLALTFFVAAFHLLFDFLAFKNDISFWKKKKSMIGMSTKAVLWRCFSTVVIFLFLLDEQTSLLVLIPAGVGAAIELWKVKKALKMTVAWRGLRPVFQFGTHSESERKTEKYDAQAMKYLSYLLYPLCVGGAVYSLLNIKYKSWYSWLINSFVNGVYAFGFLFMLPQLFVNYKMKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLYQRWLYPVDKSRVNEFGESYEEQPKRKSHPD
SIO_010081: Clptm1l
subclass of: SO_0000673
so part of: Clptm1l
location: complement(join(1403853..1403937,1405745..1405860,1406505..1406549,1406636..1406691,1407374..1407408,1408206..1408288,1409009..1409059,1409536..1409601,1410759..1410862,1412003..1412087,1412734..1412828,1413197..1413314,1415594..1415672,1416719..1416867,1418199..1418388,1419547..1419647,1420173..1420334))
location: region:1403853-1420334:-1
so has part: feature:1420173-1420334:-1:exon
so has part: feature:1419547-1419647:-1:exon
so has part: feature:1418199-1418388:-1:exon
so has part: feature:1416719-1416867:-1:exon
so has part: feature:1415594-1415672:-1:exon
so has part: feature:1413197-1413314:-1:exon
so has part: feature:1412734-1412828:-1:exon
so has part: feature:1412003-1412087:-1:exon
so has part: feature:1410759-1410862:-1:exon
so has part: feature:1409536-1409601:-1:exon
so has part: feature:1409009-1409059:-1:exon
so has part: feature:1408206-1408288:-1:exon
so has part: feature:1407374-1407408:-1:exon
so has part: feature:1406636-1406691:-1:exon
so has part: feature:1406505-1406549:-1:exon
so has part: feature:1405745-1405860:-1:exon
so has part: feature:1403853-1403937:-1:exon

XP_034379363.1
type: Protein
SIO_000068: ncbiprotein

position:1403853:-1
position: 1403853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1420334:-1
position: 1420334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1420173-1420334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1419547-1419647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1418199-1418388:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416719-1416867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415594-1415672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1413197-1413314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1412734-1412828:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1412003-1412087:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1410759-1410862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1409536-1409601:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1409009-1409059:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1408206-1408288:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1407374-1407408:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1406636-1406691:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1406505-1406549:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1405745-1405860:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1403853-1403937:-1:exon

Slc6a3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slc6a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1446760..1483805)
location: region:1446760-1483805:-1
so has part: feature:1446760-1483805:-1:exon
subclass of: SO_0000010

117723935
type: Gene
SIO_000068: ncbigene

position:1446760:-1
position: 1446760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483805:-1
position: 1483805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1446760-1483805:-1:exon

Slc6a3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc6a3
product: solute carrier family 6 member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins, and 51% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523532.1
SIO_010081: Slc6a3
subclass of: SO_0000673
so part of: Slc6a3
location: complement(join(1446760..1446811,1450757..1450828,1451684..1451851,1453153..1453253,1453882..1453981,1454542..1454670,1455740..1455852,1459441..1459565,1460869..1460972,1463542..1463676,1464637..1464775,1477315..1477546,1481283..1481414,1483482..1483774))
location: region:1446760-1483774:-1
so has part: feature:1483482-1483774:-1:exon
so has part: feature:1481283-1481414:-1:exon
so has part: feature:1477315-1477546:-1:exon
so has part: feature:1464637-1464775:-1:exon
so has part: feature:1463542-1463676:-1:exon
so has part: feature:1460869-1460972:-1:exon
so has part: feature:1459441-1459565:-1:exon
so has part: feature:1455740-1455852:-1:exon
so has part: feature:1454542-1454670:-1:exon
so has part: feature:1453882-1453981:-1:exon
so has part: feature:1453153-1453253:-1:exon
so has part: feature:1451684-1451851:-1:exon
so has part: feature:1450757-1450828:-1:exon
so has part: feature:1446760-1446811:-1:exon

position:1483774:-1
position: 1483774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483482-1483774:-1:exon

position:1483482:-1
position: 1483482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1481283-1481414:-1:exon

position:1481283:-1
position: 1481283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481414:-1
position: 1481414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1477315-1477546:-1:exon

position:1477315:-1
position: 1477315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477546:-1
position: 1477546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1464637-1464775:-1:exon

position:1464637:-1
position: 1464637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1464775:-1
position: 1464775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1463542-1463676:-1:exon

position:1463542:-1
position: 1463542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463676:-1
position: 1463676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1460869-1460972:-1:exon

position:1460869:-1
position: 1460869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1460972:-1
position: 1460972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1459441-1459565:-1:exon

position:1459441:-1
position: 1459441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459565:-1
position: 1459565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1455740-1455852:-1:exon

position:1455740:-1
position: 1455740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1455852:-1
position: 1455852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1454542-1454670:-1:exon

position:1454542:-1
position: 1454542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454670:-1
position: 1454670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1453882-1453981:-1:exon

position:1453882:-1
position: 1453882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453981:-1
position: 1453981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1453153-1453253:-1:exon

position:1453153:-1
position: 1453153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453253:-1
position: 1453253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1451684-1451851:-1:exon

position:1451684:-1
position: 1451684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1451851:-1
position: 1451851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1450757-1450828:-1:exon

position:1450757:-1
position: 1450757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1450828:-1
position: 1450828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1446760-1446811:-1:exon

position:1446811:-1
position: 1446811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc6a3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc6a3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent dopamine transporter
translation: MSKSKCSVGPMSSVVAPAKEPNAVGPREVELILVKEQNGVQLTNSTLINPPQTPVEAQERETWSKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWKICPVLKGVGFTVILISFYVGFFYNVIIAWALHYFFSSFTMDLPWIHCNNTWNSPNCSDAHTSNSSDGLGLNDTFGTTPAAEYFERGVLHLHQSRGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALLLRGVTLPGAMDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSLTSFSSGFVVFSFLGYMAQKHNVPIRDVATDGPGLIFIIYPEAIATLPLSSAWAAVFFLMLLTLGIDSAMGGMESVITGLVDEFQLLHRHRELFTLGIVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSIVTFRPPHYGAYIFPDWANALGWIIATSSMAMVPIYATYKFCSLPGSFREKLAYAITPEKDRQLVDRGEVRQFTLRHWLLV
SIO_010081: Slc6a3
subclass of: SO_0000673
so part of: Slc6a3
location: complement(join(1446788..1446811,1450757..1450828,1451684..1451851,1453153..1453253,1453882..1453981,1454542..1454670,1455740..1455852,1459441..1459565,1460869..1460972,1463542..1463676,1464637..1464775,1477315..1477546,1481283..1481414,1483482..1483767))
location: region:1446788-1483767:-1
so has part: feature:1483482-1483767:-1:exon
so has part: feature:1481283-1481414:-1:exon
so has part: feature:1477315-1477546:-1:exon
so has part: feature:1464637-1464775:-1:exon
so has part: feature:1463542-1463676:-1:exon
so has part: feature:1460869-1460972:-1:exon
so has part: feature:1459441-1459565:-1:exon
so has part: feature:1455740-1455852:-1:exon
so has part: feature:1454542-1454670:-1:exon
so has part: feature:1453882-1453981:-1:exon
so has part: feature:1453153-1453253:-1:exon
so has part: feature:1451684-1451851:-1:exon
so has part: feature:1450757-1450828:-1:exon
so has part: feature:1446788-1446811:-1:exon

XP_034379423.1
type: Protein
SIO_000068: ncbiprotein

position:1446788:-1
position: 1446788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483767:-1
position: 1483767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483482-1483767:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481283-1481414:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1477315-1477546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1464637-1464775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1463542-1463676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1460869-1460972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1459441-1459565:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1455740-1455852:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1454542-1454670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1453882-1453981:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1453153-1453253:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1451684-1451851:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1450757-1450828:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1446788-1446811:-1:exon

Slc6a3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: Slc6a3
product: solute carrier family 6 member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004608745.1
SIO_010081: Slc6a3
so part of: Slc6a3
location: complement(join(1450757..1450828,1451684..1451851,1453153..1453245,1453869..1453981,1454542..1454670,1455740..1455852,1459441..1459565,1460869..1460972,1463542..1463676,1464637..1464775,1477315..1477546,1481283..1481414,1483482..1483805))
location: region:1450757-1483805:-1
so has part: feature:1483482-1483805:-1:exon
so has part: feature:1481283-1481414:-1:exon
so has part: feature:1477315-1477546:-1:exon
so has part: feature:1464637-1464775:-1:exon
so has part: feature:1463542-1463676:-1:exon
so has part: feature:1460869-1460972:-1:exon
so has part: feature:1459441-1459565:-1:exon
so has part: feature:1455740-1455852:-1:exon
so has part: feature:1454542-1454670:-1:exon
so has part: feature:1453869-1453981:-1:exon
so has part: feature:1453153-1453245:-1:exon
so has part: feature:1451684-1451851:-1:exon
so has part: feature:1450757-1450828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483482-1483805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1481283-1481414:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1477315-1477546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1464637-1464775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1463542-1463676:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1460869-1460972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1459441-1459565:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1455740-1455852:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1454542-1454670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1453869-1453981:-1:exon

position:1453869:-1
position: 1453869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1453153-1453245:-1:exon

position:1453245:-1
position: 1453245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1451684-1451851:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1450757-1450828:-1:exon

Lpcat1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Lpcat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1503873..1555240)
location: region:1503873-1555240:-1
so has part: feature:1503873-1555240:-1:exon
subclass of: SO_0000010

117723785
type: Gene
SIO_000068: ncbigene

position:1503873:-1
position: 1503873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555240:-1
position: 1555240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1503873-1555240:-1:exon

Lpcat1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lpcat1
product: lysophosphatidylcholine acyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 1 long SRA read, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523347.1
SIO_010081: Lpcat1
subclass of: SO_0000673
so part of: Lpcat1
location: complement(join(1503873..1505959,1506468..1506609,1509396..1509494,1509795..1509948,1510362..1510487,1514799..1514881,1517296..1517350,1518587..1518621,1520609..1520667,1523628..1523688,1525103..1525215,1530861..1531075,1537452..1537594,1554950..1555240))
location: region:1503873-1555240:-1
so has part: feature:1554950-1555240:-1:exon
so has part: feature:1537452-1537594:-1:exon
so has part: feature:1530861-1531075:-1:exon
so has part: feature:1525103-1525215:-1:exon
so has part: feature:1523628-1523688:-1:exon
so has part: feature:1520609-1520667:-1:exon
so has part: feature:1518587-1518621:-1:exon
so has part: feature:1517296-1517350:-1:exon
so has part: feature:1514799-1514881:-1:exon
so has part: feature:1510362-1510487:-1:exon
so has part: feature:1509795-1509948:-1:exon
so has part: feature:1509396-1509494:-1:exon
so has part: feature:1506468-1506609:-1:exon
so has part: feature:1503873-1505959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1554950-1555240:-1:exon

position:1554950:-1
position: 1554950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1537452-1537594:-1:exon

position:1537452:-1
position: 1537452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1537594:-1
position: 1537594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1530861-1531075:-1:exon

position:1530861:-1
position: 1530861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531075:-1
position: 1531075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1525103-1525215:-1:exon

position:1525103:-1
position: 1525103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1525215:-1
position: 1525215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1523628-1523688:-1:exon

position:1523628:-1
position: 1523628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1523688:-1
position: 1523688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1520609-1520667:-1:exon

position:1520609:-1
position: 1520609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1520667:-1
position: 1520667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1518587-1518621:-1:exon

position:1518587:-1
position: 1518587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518621:-1
position: 1518621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1517296-1517350:-1:exon

position:1517296:-1
position: 1517296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1517350:-1
position: 1517350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1514799-1514881:-1:exon

position:1514799:-1
position: 1514799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1514881:-1
position: 1514881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1510362-1510487:-1:exon

position:1510362:-1
position: 1510362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510487:-1
position: 1510487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1509795-1509948:-1:exon

position:1509795:-1
position: 1509795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509948:-1
position: 1509948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1509396-1509494:-1:exon

position:1509396:-1
position: 1509396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509494:-1
position: 1509494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1506468-1506609:-1:exon

position:1506468:-1
position: 1506468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506609:-1
position: 1506609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1503873-1505959:-1:exon

position:1505959:-1
position: 1505959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lpcat1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lpcat1
product: lysophosphatidylcholine acyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034523348.1
SIO_010081: Lpcat1
subclass of: SO_0000673
so part of: Lpcat1
location: complement(join(1503873..1505959,1506468..1506609,1509396..1509494,1509795..1509948,1510362..1510487,1514799..1514881,1517296..1517350,1518587..1518621,1520609..1520667,1523628..1523688,1525103..1525215,1530861..1531075,1537452..1537594,1552283..1553266))
location: region:1503873-1553266:-1
so has part: feature:1552283-1553266:-1:exon
so has part: feature:1537452-1537594:-1:exon
so has part: feature:1530861-1531075:-1:exon
so has part: feature:1525103-1525215:-1:exon
so has part: feature:1523628-1523688:-1:exon
so has part: feature:1520609-1520667:-1:exon
so has part: feature:1518587-1518621:-1:exon
so has part: feature:1517296-1517350:-1:exon
so has part: feature:1514799-1514881:-1:exon
so has part: feature:1510362-1510487:-1:exon
so has part: feature:1509795-1509948:-1:exon
so has part: feature:1509396-1509494:-1:exon
so has part: feature:1506468-1506609:-1:exon
so has part: feature:1503873-1505959:-1:exon

position:1553266:-1
position: 1553266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1552283-1553266:-1:exon

position:1552283:-1
position: 1552283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1537452-1537594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1530861-1531075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1525103-1525215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1523628-1523688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1520609-1520667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1518587-1518621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1517296-1517350:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1514799-1514881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1510362-1510487:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1509795-1509948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1509396-1509494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1506468-1506609:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1503873-1505959:-1:exon

Lpcat1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lpcat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidylcholine acyltransferase 1 isoform X1
translation: MRLRGRRPRAAPSSSSGAGDARRLAPPGRNPFVHELRLSALQKAQVAFMTLTLFPIRLLFAAFMMLLAWPFALVASLGPPDKEPEQPLALWRKVVDFLLKAIMRTMWFAGGFHRIAVKGQQALPTEAAILTLAPHSSYFDAIPVTMTMSSIVMKAESRDIPIWGTLIRYIRPVFVSRSDQDSRRKTVEEIRRRAQSNGKWPQIMIFPEGTCTNRTCLITFKPGAFIPGVPVQPVVLRYPNKLDTITWTWQGPGALKILWLTLCQFQNQVEIEFLPVYCPSEEEKRNPALYASNVRRVMAKALGVSVTDYTFEDCQLALAEGQLRLPAHTCLLEFARLVRGLGLKPENLEKDLDKYSESARMKRGEKVGLPEFAAYLEVPVSDALEDMFLLFDESGGGEIDLREYVIALSVVCRPSQTLATIQLAFKMYGSPEDGSIDEANLSCILKTALGVSELTVTDLFQAIDQEEKGRITFDDFCGFAEMYPDFAEDYLYPDQTHFDSCAQTPPAPAPNGFCIDFSPENSDFGRKKFCKKAD
SIO_010081: Lpcat1
subclass of: SO_0000673
so part of: Lpcat1
location: complement(join(1505775..1505959,1506468..1506609,1509396..1509494,1509795..1509948,1510362..1510487,1514799..1514881,1517296..1517350,1518587..1518621,1520609..1520667,1523628..1523688,1525103..1525215,1530861..1531075,1537452..1537594,1554950..1555084))
location: region:1505775-1555084:-1
so has part: feature:1554950-1555084:-1:exon
so has part: feature:1537452-1537594:-1:exon
so has part: feature:1530861-1531075:-1:exon
so has part: feature:1525103-1525215:-1:exon
so has part: feature:1523628-1523688:-1:exon
so has part: feature:1520609-1520667:-1:exon
so has part: feature:1518587-1518621:-1:exon
so has part: feature:1517296-1517350:-1:exon
so has part: feature:1514799-1514881:-1:exon
so has part: feature:1510362-1510487:-1:exon
so has part: feature:1509795-1509948:-1:exon
so has part: feature:1509396-1509494:-1:exon
so has part: feature:1506468-1506609:-1:exon
so has part: feature:1505775-1505959:-1:exon

XP_034379238.1
type: Protein
SIO_000068: ncbiprotein

position:1505775:-1
position: 1505775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1555084:-1
position: 1555084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554950-1555084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1537452-1537594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1530861-1531075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1525103-1525215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1523628-1523688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1520609-1520667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1518587-1518621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1517296-1517350:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1514799-1514881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1510362-1510487:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1509795-1509948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1509396-1509494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1506468-1506609:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1505775-1505959:-1:exon

Lpcat1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lpcat1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophosphatidylcholine acyltransferase 1 isoform X2
translation: MKVAFMTLTLFPIRLLFAAFMMLLAWPFALVASLGPPDKEPEQPLALWRKVVDFLLKAIMRTMWFAGGFHRIAVKGQQALPTEAAILTLAPHSSYFDAIPVTMTMSSIVMKAESRDIPIWGTLIRYIRPVFVSRSDQDSRRKTVEEIRRRAQSNGKWPQIMIFPEGTCTNRTCLITFKPGAFIPGVPVQPVVLRYPNKLDTITWTWQGPGALKILWLTLCQFQNQVEIEFLPVYCPSEEEKRNPALYASNVRRVMAKALGVSVTDYTFEDCQLALAEGQLRLPAHTCLLEFARLVRGLGLKPENLEKDLDKYSESARMKRGEKVGLPEFAAYLEVPVSDALEDMFLLFDESGGGEIDLREYVIALSVVCRPSQTLATIQLAFKMYGSPEDGSIDEANLSCILKTALGVSELTVTDLFQAIDQEEKGRITFDDFCGFAEMYPDFAEDYLYPDQTHFDSCAQTPPAPAPNGFCIDFSPENSDFGRKKFCKKAD
SIO_010081: Lpcat1
subclass of: SO_0000673
so part of: Lpcat1
location: complement(join(1505775..1505959,1506468..1506609,1509396..1509494,1509795..1509948,1510362..1510487,1514799..1514881,1517296..1517350,1518587..1518621,1520609..1520667,1523628..1523688,1525103..1525215,1530861..1531075,1537452..1537594,1552283..1552288))
location: region:1505775-1552288:-1
so has part: feature:1552283-1552288:-1:exon
so has part: feature:1537452-1537594:-1:exon
so has part: feature:1530861-1531075:-1:exon
so has part: feature:1525103-1525215:-1:exon
so has part: feature:1523628-1523688:-1:exon
so has part: feature:1520609-1520667:-1:exon
so has part: feature:1518587-1518621:-1:exon
so has part: feature:1517296-1517350:-1:exon
so has part: feature:1514799-1514881:-1:exon
so has part: feature:1510362-1510487:-1:exon
so has part: feature:1509795-1509948:-1:exon
so has part: feature:1509396-1509494:-1:exon
so has part: feature:1506468-1506609:-1:exon
so has part: feature:1505775-1505959:-1:exon

XP_034379239.1
type: Protein
SIO_000068: ncbiprotein

position:1552288:-1
position: 1552288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1552283-1552288:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1537452-1537594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1530861-1531075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1525103-1525215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1523628-1523688:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1520609-1520667:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1518587-1518621:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1517296-1517350:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1514799-1514881:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1510362-1510487:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1509795-1509948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1509396-1509494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1506468-1506609:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1505775-1505959:-1:exon

Mrpl36
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mrpl36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1687738..1688925)
location: region:1687738-1688925:-1
so has part: feature:1687738-1688925:-1:exon
subclass of: SO_0000010

117723742
type: Gene
SIO_000068: ncbigene

position:1687738:-1
position: 1687738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688925:-1
position: 1688925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1687738-1688925:-1:exon

Mrpl36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mrpl36
product: mitochondrial ribosomal protein L36, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523278.1
SIO_010081: Mrpl36
subclass of: SO_0000673
so part of: Mrpl36
location: complement(join(1687738..1688572,1688837..1688925))
location: region:1687738-1688925:-1
so has part: feature:1688837-1688925:-1:exon
so has part: feature:1687738-1688572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1688837-1688925:-1:exon

position:1688837:-1
position: 1688837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1687738-1688572:-1:exon

position:1688572:-1
position: 1688572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mrpl36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mrpl36
product: mitochondrial ribosomal protein L36, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523277.1
SIO_010081: Mrpl36
subclass of: SO_0000673
so part of: Mrpl36
location: complement(join(1687738..1688572,1688673..1688911))
location: region:1687738-1688911:-1
so has part: feature:1688673-1688911:-1:exon
so has part: feature:1687738-1688572:-1:exon

position:1688911:-1
position: 1688911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1688673-1688911:-1:exon

position:1688673:-1
position: 1688673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1687738-1688572:-1:exon

Mrpl36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mrpl36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L36, mitochondrial
translation: MAALLVRSVVASVVDPFLHLSRLAVKPRAFSSFLLGTMPSAKPCAEVRSLLCGRPLPSLQPSLSFKTKGVIKKRCRDCYMVKRRGRWFVLCKTNPKHKQRQM
SIO_010081: Mrpl36
subclass of: SO_0000673
so part of: Mrpl36
location: complement(1688251..1688559)
location: region:1688251-1688559:-1
so has part: feature:1688251-1688559:-1:exon

XP_034379168.1
type: Protein
SIO_000068: ncbiprotein

position:1688251:-1
position: 1688251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688559:-1
position: 1688559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1688251-1688559:-1:exon

Mrpl36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mrpl36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L36, mitochondrial
translation: MAALLVRSVVASVVDPFLHLSRLAVKPRAFSSFLLGTMPSAKPCAEVRSLLCGRPLPSLQPSLSFKTKGVIKKRCRDCYMVKRRGRWFVLCKTNPKHKQRQM
SIO_010081: Mrpl36
subclass of: SO_0000673
so part of: Mrpl36
location: complement(1688251..1688559)
location: region:1688251-1688559:-1
so has part: feature:1688251-1688559:-1:exon

XP_034379169.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1688251-1688559:-1:exon

Ndufs6
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ndufs6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1691155..1700203
location: region:1691155-1700203:1
so has part: feature:1691155-1700203:1:exon
subclass of: SO_0000010

117723942
type: Gene
SIO_000068: ncbigene

position:1691155:1
position: 1691155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700203:1
position: 1700203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1691155-1700203:1:exon

Ndufs6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ndufs6
product: NADH:ubiquinone oxidoreductase subunit S6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523540.1
SIO_010081: Ndufs6
subclass of: SO_0000673
so part of: Ndufs6
location: join(1691155..1691292,1692216..1692269,1699628..1699750,1700016..1700203)
location: region:1691155-1700203:1
so has part: feature:1691155-1691292:1:exon
so has part: feature:1692216-1692269:1:exon
so has part: feature:1699628-1699750:1:exon
so has part: feature:1700016-1700203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1691155-1691292:1:exon

position:1691292:1
position: 1691292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1692216-1692269:1:exon

position:1692216:1
position: 1692216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692269:1
position: 1692269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1699628-1699750:1:exon

position:1699628:1
position: 1699628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699750:1
position: 1699750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1700016-1700203:1:exon

position:1700016:1
position: 1700016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ndufs6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ndufs6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
translation: MAAALTFRRLLALPRAARGFGVRVSPSGEKITHTGQVYDEKDYRRIRFVDRQKEVNENFAIDLIAQQPVNEVDHRIIACDGGGGALGHPKVYINLDKETKTGTCGYCGLQFKQHHH
SIO_010081: Ndufs6
subclass of: SO_0000673
so part of: Ndufs6
location: join(1691185..1691292,1692216..1692269,1699628..1699750,1700016..1700081)
location: region:1691185-1700081:1
so has part: feature:1691185-1691292:1:exon
so has part: feature:1692216-1692269:1:exon
so has part: feature:1699628-1699750:1:exon
so has part: feature:1700016-1700081:1:exon

XP_034379431.1
type: Protein
SIO_000068: ncbiprotein

position:1691185:1
position: 1691185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700081:1
position: 1700081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1691185-1691292:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692216-1692269:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1699628-1699750:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1700016-1700081:1:exon

Irx4
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Irx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1753479..1758069)
location: region:1753479-1758069:-1
so has part: feature:1753479-1758069:-1:exon
subclass of: SO_0000010

117723936
type: Gene
SIO_000068: ncbigene

position:1753479:-1
position: 1753479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1758069:-1
position: 1758069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1753479-1758069:-1:exon

Irx4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Irx4
product: iroquois homeobox 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034523534.1
SIO_010081: Irx4
subclass of: SO_0000673
so part of: Irx4
location: complement(join(1753479..1754845,1755233..1755561,1756316..1756428,1757209..1757460,1757928..1758069))
location: region:1753479-1758069:-1
so has part: feature:1757928-1758069:-1:exon
so has part: feature:1757209-1757460:-1:exon
so has part: feature:1756316-1756428:-1:exon
so has part: feature:1755233-1755561:-1:exon
so has part: feature:1753479-1754845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1757928-1758069:-1:exon

position:1757928:-1
position: 1757928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1757209-1757460:-1:exon

position:1757209:-1
position: 1757209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757460:-1
position: 1757460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1756316-1756428:-1:exon

position:1756316:-1
position: 1756316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756428:-1
position: 1756428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1755233-1755561:-1:exon

position:1755233:-1
position: 1755233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1755561:-1
position: 1755561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1753479-1754845:-1:exon

position:1754845:-1
position: 1754845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Irx4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Irx4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-4
translation: MSYPQFGYPYSSAPQFLMTTNSLSTCCESGGRTLADSGPAASAQAPVYCPVYESRLLATARHELNSAAALGVYGSPYGSSQGYSNYVTYGSEASAFYSLNSFESKDGTGSSHAGLPPTAAAAYYPYEPALGQYPYDRYGTVDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWPPRNKCADEKRPYGEGEEEEAGEEETREEPLKSAKSEGPADKDDKELELSDLEDFDPLETETSECELKTPFQPLDSGSERIPASSDGPGTGKEASATLRMPLGTSGGAVMDGDLERARNCLRSSVVAPDSGSEGGPPACEAKLTFAPAGAPPNLETKPRIWSLAHTATAAAATALSQTEFPSCMLKRQGPAGASAATPTSSPAVTAPSGVLDRHQDSPVTSLRNWVDGVFHDPILRHSTLNQAWATAKGALLDPGPLGRNLGAGTNVLTTPLACSFPPTMPQDVPPAGASRELLATPKAGGKPFCT
SIO_010081: Irx4
subclass of: SO_0000673
so part of: Irx4
location: complement(join(1754037..1754845,1755233..1755561,1756316..1756428,1757209..1757460,1757928..1757972))
location: region:1754037-1757972:-1
so has part: feature:1757928-1757972:-1:exon
so has part: feature:1757209-1757460:-1:exon
so has part: feature:1756316-1756428:-1:exon
so has part: feature:1755233-1755561:-1:exon
so has part: feature:1754037-1754845:-1:exon

XP_034379425.1
type: Protein
SIO_000068: ncbiprotein

position:1754037:-1
position: 1754037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757972:-1
position: 1757972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1757928-1757972:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1757209-1757460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1756316-1756428:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1755233-1755561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1754037-1754845:-1:exon

LOC117724101
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724101
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(1854472..1854611)
location: region:1854472-1854611:-1
so has part: feature:1854472-1854611:-1:exon

117724101
type: Gene
SIO_000068: ncbigene

position:1854472:-1
position: 1854472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854611:-1
position: 1854611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1854472-1854611:-1:exon

LOC117724101
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724101
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117724101
subclass of: SO_0000673
so part of: LOC117724101
location: complement(1854472..1854611)
location: region:1854472-1854611:-1
so has part: feature:1854472-1854611:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1854472-1854611:-1:exon

Irx2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Irx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2384590..2390005)
location: region:2384590-2390005:-1
so has part: feature:2384590-2390005:-1:exon
subclass of: SO_0000010

117724038
type: Gene
SIO_000068: ncbigene

position:2384590:-1
position: 2384590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390005:-1
position: 2390005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2384590-2390005:-1:exon

Irx2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Irx2
product: iroquois homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 12 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034523668.1
SIO_010081: Irx2
subclass of: SO_0000673
so part of: Irx2
location: complement(join(2384590..2385519,2386187..2386262,2386874..2387587,2387868..2388273,2389506..2390005))
location: region:2384590-2390005:-1
so has part: feature:2389506-2390005:-1:exon
so has part: feature:2387868-2388273:-1:exon
so has part: feature:2386874-2387587:-1:exon
so has part: feature:2386187-2386262:-1:exon
so has part: feature:2384590-2385519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2389506-2390005:-1:exon

position:2389506:-1
position: 2389506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2387868-2388273:-1:exon

position:2387868:-1
position: 2387868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2388273:-1
position: 2388273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2386874-2387587:-1:exon

position:2386874:-1
position: 2386874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2387587:-1
position: 2387587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2386187-2386262:-1:exon

position:2386187:-1
position: 2386187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2386262:-1
position: 2386262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2384590-2385519:-1:exon

position:2385519:-1
position: 2385519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Irx2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Irx2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-2
translation: MSYPQGYLYQAPGSLALYSCPAYGASALAAPRSEELARSASGSAFSPYPGSAAFTAQAATGFGSPLQYSADAAAAAAAGFPSYMGSPYDTHTTGMTGAISYHPYGSAAYPYQLNDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDEDEDEGDASRSKEESPDKAQDGTETSAEDEGISLHVDSLTDHSCSAESDGEKLPCRAGDPLCESGSECKDKFEDLEDEDDDEDECERNLAPPKPVTSSPLTGVEAPLLSPASEAAPRGGSGGKTPLGSRTSPGAPPPASKPKLWSLAEIATSDLKQPSLGPGCGPPGLPAAAAPASSGAPPGGSPYSASPLLGRHLYYTSPFYGNYTNYGNLNAALQGQGLLRYNTAASSPGETLHAMPKAASDAGKAGSHSLESHYRPPGGGYEPKKDASEGCAVVGAGVQPYL
SIO_010081: Irx2
subclass of: SO_0000673
so part of: Irx2
location: complement(join(2386210..2386262,2386874..2387587,2387868..2388273,2389506..2389757))
location: region:2386210-2389757:-1
so has part: feature:2389506-2389757:-1:exon
so has part: feature:2387868-2388273:-1:exon
so has part: feature:2386874-2387587:-1:exon
so has part: feature:2386210-2386262:-1:exon

XP_034379559.1
type: Protein
SIO_000068: ncbiprotein

position:2386210:-1
position: 2386210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2389757:-1
position: 2389757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2389506-2389757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2387868-2388273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386874-2387587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2386210-2386262:-1:exon

LOC117724044
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2744427..2744897)
location: region:2744427-2744897:-1
so has part: feature:2744427-2744897:-1:exon
subclass of: SO_0000010

117724044
type: Gene
SIO_000068: ncbigene

position:2744427:-1
position: 2744427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2744897:-1
position: 2744897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2744427-2744897:-1:exon

LOC117724044
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117724044
product: 60S ribosomal protein L23a-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523674.1
SIO_010081: LOC117724044
subclass of: SO_0000673
so part of: LOC117724044
location: complement(2744427..2744897)
location: region:2744427-2744897:-1
so has part: feature:2744427-2744897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2744427-2744897:-1:exon

LOC117724044
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117724044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L23a-like
translation: MAQKARNEAPAPPKAEAKAKALKAKKAVLKGVHSHKKKKIQTSPTFQRPKTLWLQRQPKYPRKSAPRRNKLDYYVIIKFPLITESATKKIEDNNTLVFIVDVKANKHQIKQAAKKRYDIDVAKVNTLIRPDGEKKAYVGLAPDYGAVDVANKIGII
SIO_010081: LOC117724044
subclass of: SO_0000673
so part of: LOC117724044
location: complement(2744427..2744897)
location: region:2744427-2744897:-1
so has part: feature:2744427-2744897:-1:exon

XP_034379565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2744427-2744897:-1:exon

Irx1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Irx1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3008299..3013825
location: region:3008299-3013825:1
so has part: feature:3008299-3013825:1:exon
subclass of: SO_0000010

117723743
type: Gene
SIO_000068: ncbigene

position:3008299:1
position: 3008299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3013825:1
position: 3013825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008299-3013825:1:exon

Irx1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Irx1
product: iroquois homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 long SRA read, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034523279.1
SIO_010081: Irx1
subclass of: SO_0000673
so part of: Irx1
location: join(3008299..3008803,3011755..3012790,3013084..3013156,3013389..3013825)
location: region:3008299-3013825:1
so has part: feature:3008299-3008803:1:exon
so has part: feature:3011755-3012790:1:exon
so has part: feature:3013084-3013156:1:exon
so has part: feature:3013389-3013825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3008299-3008803:1:exon

position:3008803:1
position: 3008803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3011755-3012790:1:exon

position:3011755:1
position: 3011755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3012790:1
position: 3012790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3013084-3013156:1:exon

position:3013084:1
position: 3013084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3013156:1
position: 3013156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3013389-3013825:1:exon

position:3013389:1
position: 3013389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Irx1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Irx1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iroquois-class homeodomain protein IRX-1
translation: MSFPQLGYPQYLSAAGPGAYGGERPGVLAAAAAAAAAASSGRPGTAELGAGAGAAAVTSVLGMYAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTTPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDQIDERDGDQSNEDEEDKAEAPRARVAPPASARDQGSPLSAAETLKSQDSPLGLAKEVSEPGSTRLLSPGAAAVGLQGAPHSKPKIWSLAETATSPDGAPKASPPPPSSHASAHGPPSGSPLQHPAFLPSHGLYTCHIGKFSNWTNGAFLAQGSLLNMRSFLGVSAPHATPHGSHLTAPPPPQPPVQVATGILHGEKASARSSPALPERDLVTRPDSPPQQLKSPFQPVRDNSLAPQEGTPRILAALSSA
SIO_010081: Irx1
subclass of: SO_0000673
so part of: Irx1
location: join(3008528..3008803,3011755..3012790,3013084..3013156,3013389..3013446)
location: region:3008528-3013446:1
so has part: feature:3008528-3008803:1:exon
so has part: feature:3011755-3012790:1:exon
so has part: feature:3013084-3013156:1:exon
so has part: feature:3013389-3013446:1:exon

XP_034379170.1
type: Protein
SIO_000068: ncbiprotein

position:3008528:1
position: 3008528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3013446:1
position: 3013446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3008528-3008803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3011755-3012790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3013084-3013156:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3013389-3013446:1:exon

LOC117723697
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3277379..3278182
location: region:3277379-3278182:1
so has part: feature:3277379-3278182:1:exon

117723697
type: Gene
SIO_000068: ncbigene

position:3277379:1
position: 3277379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3278182:1
position: 3278182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3277379-3278182:1:exon

LOC117723697
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723697
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117723697
subclass of: SO_0000673
so part of: LOC117723697
location: 3277379..3278182
location: region:3277379-3278182:1
so has part: feature:3277379-3278182:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3277379-3278182:1:exon

Adamts16
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Adamts16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4066952..4185974
location: region:4066952-4185974:1
so has part: feature:4066952-4185974:1:exon
subclass of: SO_0000010

117723910
type: Gene
SIO_000068: ncbigene

position:4066952:1
position: 4066952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4185974:1
position: 4185974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4066952-4185974:1:exon

Adamts16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Adamts16
product: ADAM metallopeptidase with thrombospondin type 1 motif 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 10 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523493.1
SIO_010081: Adamts16
subclass of: SO_0000673
so part of: Adamts16
location: join(4066952..4067272,4067384..4067486,4072217..4072548,4103659..4103920,4107007..4107206,4108999..4109082,4111433..4111592,4112734..4112839,4120519..4120656,4127262..4127415,4129478..4129573,4134725..4134873,4135845..4136017,4137735..4137865,4139285..4139408,4139972..4140216,4144665..4144803,4154113..4154245,4175202..4175403,4175495..4175689,4177888..4178112,4183183..4183330,4184749..4185974)
location: region:4066952-4185974:1
so has part: feature:4066952-4067272:1:exon
so has part: feature:4067384-4067486:1:exon
so has part: feature:4072217-4072548:1:exon
so has part: feature:4103659-4103920:1:exon
so has part: feature:4107007-4107206:1:exon
so has part: feature:4108999-4109082:1:exon
so has part: feature:4111433-4111592:1:exon
so has part: feature:4112734-4112839:1:exon
so has part: feature:4120519-4120656:1:exon
so has part: feature:4127262-4127415:1:exon
so has part: feature:4129478-4129573:1:exon
so has part: feature:4134725-4134873:1:exon
so has part: feature:4135845-4136017:1:exon
so has part: feature:4137735-4137865:1:exon
so has part: feature:4139285-4139408:1:exon
so has part: feature:4139972-4140216:1:exon
so has part: feature:4144665-4144803:1:exon
so has part: feature:4154113-4154245:1:exon
so has part: feature:4175202-4175403:1:exon
so has part: feature:4175495-4175689:1:exon
so has part: feature:4177888-4178112:1:exon
so has part: feature:4183183-4183330:1:exon
so has part: feature:4184749-4185974:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4066952-4067272:1:exon

position:4067272:1
position: 4067272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4067384-4067486:1:exon

position:4067384:1
position: 4067384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4067486:1
position: 4067486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4072217-4072548:1:exon

position:4072217:1
position: 4072217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4072548:1
position: 4072548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4103659-4103920:1:exon

position:4103659:1
position: 4103659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4103920:1
position: 4103920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4107007-4107206:1:exon

position:4107007:1
position: 4107007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4107206:1
position: 4107206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4108999-4109082:1:exon

position:4108999:1
position: 4108999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4109082:1
position: 4109082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4111433-4111592:1:exon

position:4111433:1
position: 4111433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4111592:1
position: 4111592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4112734-4112839:1:exon

position:4112734:1
position: 4112734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4112839:1
position: 4112839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4120519-4120656:1:exon

position:4120519:1
position: 4120519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4120656:1
position: 4120656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4127262-4127415:1:exon

position:4127262:1
position: 4127262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4127415:1
position: 4127415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4129478-4129573:1:exon

position:4129478:1
position: 4129478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4129573:1
position: 4129573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4134725-4134873:1:exon

position:4134725:1
position: 4134725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4134873:1
position: 4134873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4135845-4136017:1:exon

position:4135845:1
position: 4135845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4136017:1
position: 4136017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4137735-4137865:1:exon

position:4137735:1
position: 4137735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4137865:1
position: 4137865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4139285-4139408:1:exon

position:4139285:1
position: 4139285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4139408:1
position: 4139408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4139972-4140216:1:exon

position:4139972:1
position: 4139972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4140216:1
position: 4140216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4144665-4144803:1:exon

position:4144665:1
position: 4144665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4144803:1
position: 4144803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4154113-4154245:1:exon

position:4154113:1
position: 4154113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4154245:1
position: 4154245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4175202-4175403:1:exon

position:4175202:1
position: 4175202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4175403:1
position: 4175403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4175495-4175689:1:exon

position:4175495:1
position: 4175495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4175689:1
position: 4175689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4177888-4178112:1:exon

position:4177888:1
position: 4177888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4178112:1
position: 4178112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4183183-4183330:1:exon

position:4183183:1
position: 4183183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4183330:1
position: 4183330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4184749-4185974:1:exon

position:4184749:1
position: 4184749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Adamts16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Adamts16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: A disintegrin and metalloproteinase with thrombospondin motifs 16
translation: MEPRGCAALWVLLLAQVSEQQSPACALGPTAAASGSPGDPHPSPSSGSVWLETGEYDLVSAYEVDHKGDYVSHDIMHHQRRRRRRAVAQPGGDALHLRLKGPRHDLHLDLKAASNLMAPGFMVQTLGKGGTKSVQMFPAEENCFYQGSLRSQGNSSVALSTCQGLLGMIRTKDTDYFLKPLPPHLTSKLDRAAQGGSPSHVLYKRSTEPQAPRENEVLMITRKRDLTRRHLHHDNFPLGLSQKQHFCGRRKKYMPQPPNDDLYILPDEYKPSSRHKRSLLKSHRNEELNVETLVVVDRKMMQNHGHENITTYVLTILNMVSALFKDGTIGGNINIVIVGLILLEDEQPGLVISHHADHTLTSFCQWQSGLMGKDGTRHDHAILLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTVNEDSGLGLAFTIAHESGHNFGMVHDGEGNMCKKSEGNIMSPTLAGRNGVFSWSPCSRQYLHKFLSTAQAICLADQPKPVKEYKYPEKLPGQLYDANTQCKWQFGEKAKLCMLDFRKDICKALWCHRIGRKCETKFMPAAEGTLCGQDMWCRGGQCVKYGDEGPKPTHGHWSDWSPWSPCSRTCGGGVSHRDRLCTNPRPSHGGKFCQGSTRTLKLCNSQKCPLDSVDFRAAQCAEYNSKRFRGWLYKWKPYTQVEDQDLCKLYCIAEGFDFFFSLSNKVKDGTPCSEDSRNVCIDGMCEKVGCDNVLGSDATEDSCGVCKGNNSDCIMHRGLYSKHHPTNQYYHMVTIPSGARSIRIYETNMSTSYISVRNSLKRYYLNGHWSVDWPGRYKFSGTTFNYKRSYKEPESLTSTGPTNETLIVELLFQGRNPGVAWEFSLPRSGAKRTPAAQPSYSWAIIRSECSVSCGGGKMNSKAGCYRDLKVPVNASFCNPKTQPGPVTGLVPCKMSACPPSWSVGNWSTCSRTCGGGTQSRPVRCTQRARYREESISASLCPQPAPPIHQACNSQSCPPAWSTGPWAECSRTCGKGWRKRAVVCKSTNPSARAQLLHDTACTSEPKPRTHEVCLLKRCHKHKKLQWLVSAWSQCSVTCQRGTQQRVLRCAEKYISGKYRELATKKCLHLPKPDLELERACGLIPCPKHPPYAAAGPPRGSWFASPWSQCTASCGGGVQRRTVQCLLGGQPASDCFLNEKPETSSACNTHFCPISEKRGTFCKDLFQWCYLVPQHGMCSHRFYSKQCCNTCSKSNL
SIO_010081: Adamts16
subclass of: SO_0000673
so part of: Adamts16
location: join(4067213..4067272,4067384..4067486,4072217..4072548,4103659..4103920,4107007..4107206,4108999..4109082,4111433..4111592,4112734..4112839,4120519..4120656,4127262..4127415,4129478..4129573,4134725..4134873,4135845..4136017,4137735..4137865,4139285..4139408,4139972..4140216,4144665..4144803,4154113..4154245,4175202..4175403,4175495..4175689,4177888..4178112,4183183..4183330,4184749..4184864)
location: region:4067213-4184864:1
so has part: feature:4067213-4067272:1:exon
so has part: feature:4067384-4067486:1:exon
so has part: feature:4072217-4072548:1:exon
so has part: feature:4103659-4103920:1:exon
so has part: feature:4107007-4107206:1:exon
so has part: feature:4108999-4109082:1:exon
so has part: feature:4111433-4111592:1:exon
so has part: feature:4112734-4112839:1:exon
so has part: feature:4120519-4120656:1:exon
so has part: feature:4127262-4127415:1:exon
so has part: feature:4129478-4129573:1:exon
so has part: feature:4134725-4134873:1:exon
so has part: feature:4135845-4136017:1:exon
so has part: feature:4137735-4137865:1:exon
so has part: feature:4139285-4139408:1:exon
so has part: feature:4139972-4140216:1:exon
so has part: feature:4144665-4144803:1:exon
so has part: feature:4154113-4154245:1:exon
so has part: feature:4175202-4175403:1:exon
so has part: feature:4175495-4175689:1:exon
so has part: feature:4177888-4178112:1:exon
so has part: feature:4183183-4183330:1:exon
so has part: feature:4184749-4184864:1:exon

XP_034379384.1
type: Protein
SIO_000068: ncbiprotein

position:4067213:1
position: 4067213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4184864:1
position: 4184864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4067213-4067272:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4067384-4067486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4072217-4072548:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4103659-4103920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4107007-4107206:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4108999-4109082:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4111433-4111592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4112734-4112839:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4120519-4120656:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4127262-4127415:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4129478-4129573:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4134725-4134873:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4135845-4136017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4137735-4137865:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4139285-4139408:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4139972-4140216:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4144665-4144803:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4154113-4154245:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4175202-4175403:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4175495-4175689:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4177888-4178112:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4183183-4183330:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4184749-4184864:1:exon

Ice1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ice1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4263620..4308046
location: region:4263620-4308046:1
so has part: feature:4263620-4308046:1:exon
subclass of: SO_0000010

117723776
type: Gene
SIO_000068: ncbigene

position:4263620:1
position: 4263620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4308046:1
position: 4308046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4263620-4308046:1:exon

Ice1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ice1
product: interactor of little elongation complex ELL subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034523334.1
SIO_010081: Ice1
subclass of: SO_0000673
so part of: Ice1
location: join(4263620..4263884,4273937..4273995,4274442..4274476,4276423..4276441,4277141..4277252,4278846..4278922,4279896..4279933,4281559..4281641,4281872..4281911,4281995..4282051,4286464..4286550,4287915..4288351,4290239..4294996,4295965..4296133,4298294..4298454,4300842..4301032,4302174..4302280,4304262..4304360,4306952..4308046)
location: region:4263620-4308046:1
so has part: feature:4263620-4263884:1:exon
so has part: feature:4273937-4273995:1:exon
so has part: feature:4274442-4274476:1:exon
so has part: feature:4276423-4276441:1:exon
so has part: feature:4277141-4277252:1:exon
so has part: feature:4278846-4278922:1:exon
so has part: feature:4279896-4279933:1:exon
so has part: feature:4281559-4281641:1:exon
so has part: feature:4281872-4281911:1:exon
so has part: feature:4281995-4282051:1:exon
so has part: feature:4286464-4286550:1:exon
so has part: feature:4287915-4288351:1:exon
so has part: feature:4290239-4294996:1:exon
so has part: feature:4295965-4296133:1:exon
so has part: feature:4298294-4298454:1:exon
so has part: feature:4300842-4301032:1:exon
so has part: feature:4302174-4302280:1:exon
so has part: feature:4304262-4304360:1:exon
so has part: feature:4306952-4308046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4263620-4263884:1:exon

position:4263884:1
position: 4263884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4273937-4273995:1:exon

position:4273937:1
position: 4273937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4273995:1
position: 4273995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4274442-4274476:1:exon

position:4274442:1
position: 4274442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4274476:1
position: 4274476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4276423-4276441:1:exon

position:4276423:1
position: 4276423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4276441:1
position: 4276441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4277141-4277252:1:exon

position:4277141:1
position: 4277141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4277252:1
position: 4277252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4278846-4278922:1:exon

position:4278846:1
position: 4278846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4278922:1
position: 4278922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4279896-4279933:1:exon

position:4279896:1
position: 4279896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4279933:1
position: 4279933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4281559-4281641:1:exon

position:4281559:1
position: 4281559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281641:1
position: 4281641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4281872-4281911:1:exon

position:4281872:1
position: 4281872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4281911:1
position: 4281911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4281995-4282051:1:exon

position:4281995:1
position: 4281995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4282051:1
position: 4282051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4286464-4286550:1:exon

position:4286464:1
position: 4286464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4286550:1
position: 4286550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4287915-4288351:1:exon

position:4287915:1
position: 4287915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4288351:1
position: 4288351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4290239-4294996:1:exon

position:4290239:1
position: 4290239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4294996:1
position: 4294996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4295965-4296133:1:exon

position:4295965:1
position: 4295965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4296133:1
position: 4296133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4298294-4298454:1:exon

position:4298294:1
position: 4298294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4298454:1
position: 4298454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4300842-4301032:1:exon

position:4300842:1
position: 4300842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4301032:1
position: 4301032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4302174-4302280:1:exon

position:4302174:1
position: 4302174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4302280:1
position: 4302280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4304262-4304360:1:exon

position:4304262:1
position: 4304262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4304360:1
position: 4304360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4306952-4308046:1:exon

position:4306952:1
position: 4306952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ice1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ice1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: little elongation complex subunit 1
translation: MMPGETHPAAPGPADLARCQGCASLQQNLNEYVEALIALKQKIINTDNLLTEYQKKCDELQFARRENSTLHHQVEQMLQKISPLQKCQEELGSLKAELEEKKSSLKLYQDTHQEYARVKEECLRTDAQKKKLEAKVKKLEEAAVKQTQDFKQLRNEKKILEKEFKKTQERLDEFSKQKTEKELRHIGTQISSDSHGSIDKRKVKVLLKELWLCVNTAHRLSGESGRRIPEKPAKGDSAPRASGQDELLPVQGSPPGAADMRSFFTKLSMEMEGDFSSSESAEEELPGGASPGTEHELPGGASPGTERVFHEERHPEVSVQRPDDSNRTSVYDHEHFFDDDLQAAIDFFKLPPPLLSPVPSPPPMASGSLPSSLAPESFSGEFTDSSDSDSVPPRDSMESALEDYTAGSRGYFDLLEKIKRSDTLVEKPWSLEAVQAVNTLTHLGFDTGRTALGEPSATSSLARARHWTASSEFVRDRGDSVEEAERKVEAREVDKSVQVGKGLLKQNRRLWPEMASRGPARKKEAGAGESEICYSSLGKRTLSELTDSEGKTLPSKTLCPSQSEFSKRTLTDGFASKPHCVTGSGHFQRRERDAQESTPQSGLCAAAAGRERSASLPSSSSATSVPVSVCSNRQTSWLGCVSVDTPADVTCTEQKSPTRTSNPFLLRSEPTACFPKESDPENSLSTLSPKSKLGTSAFSDWKSRGLESFSTLKSTVKEHSLPQPGFQKSTGGGQCGGRGRGTPLILPKSDWTSLARSPPGFTRRSPGSTDSTSWHRSDVLRRGSGGSPRATSEYQQRTRLQLEKAAPASQNSRRTAMLGPPGKSTIPLEFKAAAALLPNQVSVITKQARPKRVLSSSLEPWRPRGSTLSPAVNGGKEKGLPPSGAACVRDGDLIAQIPEQVADEEAPSPEVSVSWQKPSCDSLSGSLLTENFSCSTDRKLPFSSEDNLFQSVMNEHLLQKPRKSPKTTQSGASGLPSGVTSEVFPAEQMPHGPQPQANPEAPVVARDSHHAPQSASAPHRVPSRAPLRARVPTSPVCPAGLGHADEETQGTSQSSLPGASYCYTGIRERGGEDTEMEDEAVSGSEGEQEAEAVLGRRQQEAAGDSRRSPGNPEAAVGEAGHPSDVGDLTSALRECNLSTFLYIDKLSTSEVVMVLESCQLRDYSSRASVSECSSKGTVNEEMNKELRQSEISRKKCGKRFCEEELLRASEEWAESEGDDCRGRKSCQHTPCPLELPSDVLTKTGEELHTNPVDCSGKDTEHVLLVNSHHSQAAEDLTENALPEETSSPIPHTAELPEPPAADGGGSSPLSSRSDPEHIQSRYEDEPSSEGCLSTGEEGLAEPEELLTLSSDSPAPPRLEESSDCVAETAFRYQISAVTSEVISVLINKDQDLVIEKGDNWTIISGVAISPGMEQVVLCETLGDAAPSQDQGGLHDGSLEKSPEASPSGPLPQEPPCGGDLSGAQEDAASNGQSANFDKSRLRNRPVKPSIWIRSQIYDQTLETEKVASDHTYYNWKLEPLGKNKSRSKVSNKDQASKLAKTPGLGRGEVHLSEDLQPVSGERTDTETPGLSRGEVHLSEDLQPVSGERTNTKTPGSHAQPAVAGTAMSTPTNCSPDTLSKIRQEVGPPLPPLLPPLIATPPRTSRTLSPLIPSSSPSSRPSPAGHVSPLCEVPGPPVLSPWPEELQQASPLDPSPSPSTATASGRIVSSPLQFCAATPKHALPVPGRLPSCAPGHASVSGPQENSVKILDTMYPELSARARTLSLLKGNMQLSRGSTVDGKVLPGRVSALLGLKAITSTSTAFVLTGGSSAGDCSQGKSQDSGVERDAGGKRTLAVPMLRSAKRLRLDESESPEPDSRDVPGEGVPKEPQGGSPPAEVGPAEEEPADLPVSSSASLLRVNPREMAESYNIAITRALRKIAESSFDLLPVIRSHVYVGNISKKPVMRDQEKEVVYEFSTTNKHLGEYLLRSILSELKIQKTSLDHSYIHALCRVYVGICRQ…
SIO_010081: Ice1
subclass of: SO_0000673
so part of: Ice1
location: join(4263804..4263884,4273937..4273995,4274442..4274476,4276423..4276441,4277141..4277252,4278846..4278922,4279896..4279933,4281559..4281641,4281872..4281911,4281995..4282051,4286464..4286550,4287915..4288351,4290239..4294996,4295965..4296133,4298294..4298454,4300842..4301032,4302174..4302280,4304262..4304360,4306952..4307163)
location: region:4263804-4307163:1
so has part: feature:4263804-4263884:1:exon
so has part: feature:4273937-4273995:1:exon
so has part: feature:4274442-4274476:1:exon
so has part: feature:4276423-4276441:1:exon
so has part: feature:4277141-4277252:1:exon
so has part: feature:4278846-4278922:1:exon
so has part: feature:4279896-4279933:1:exon
so has part: feature:4281559-4281641:1:exon
so has part: feature:4281872-4281911:1:exon
so has part: feature:4281995-4282051:1:exon
so has part: feature:4286464-4286550:1:exon
so has part: feature:4287915-4288351:1:exon
so has part: feature:4290239-4294996:1:exon
so has part: feature:4295965-4296133:1:exon
so has part: feature:4298294-4298454:1:exon
so has part: feature:4300842-4301032:1:exon
so has part: feature:4302174-4302280:1:exon
so has part: feature:4304262-4304360:1:exon
so has part: feature:4306952-4307163:1:exon

XP_034379225.1
type: Protein
SIO_000068: ncbiprotein

position:4263804:1
position: 4263804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4307163:1
position: 4307163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4263804-4263884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4273937-4273995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4274442-4274476:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4276423-4276441:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4277141-4277252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4278846-4278922:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4279896-4279933:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4281559-4281641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4281872-4281911:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4281995-4282051:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4286464-4286550:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4287915-4288351:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4290239-4294996:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4295965-4296133:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4298294-4298454:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4300842-4301032:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4302174-4302280:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4304262-4304360:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4306952-4307163:1:exon

LOC117723698
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4341283..4379586
location: region:4341283-4379586:1
so has part: feature:4341283-4379586:1:exon

117723698
type: Gene
SIO_000068: ncbigene

position:4341283:1
position: 4341283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4379586:1
position: 4379586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4341283-4379586:1:exon

LOC117723698
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723698
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
pseudo: true
SIO_010081: LOC117723698
subclass of: SO_0000673
so part of: LOC117723698
location: 4341283..4341343
location: region:4341283-4341343:1
so has part: feature:4341283-4341343:1:exon

position:4341343:1
position: 4341343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4341283-4341343:1:exon

LOC117724088
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724088
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4354743..4354849
location: region:4354743-4354849:1
so has part: feature:4354743-4354849:1:exon

117724088
type: Gene
SIO_000068: ncbigene

position:4354743:1
position: 4354743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4354849:1
position: 4354849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4354743-4354849:1:exon

LOC117724088
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724088
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117724088
subclass of: SO_0000673
so part of: LOC117724088
location: 4354743..4354849
location: region:4354743-4354849:1
so has part: feature:4354743-4354849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4354743-4354849:1:exon

LOC117723698
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723698
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
pseudo: true
SIO_010081: LOC117723698
subclass of: SO_0000673
so part of: LOC117723698
location: 4355508..4355576
location: region:4355508-4355576:1
so has part: feature:4355508-4355576:1:exon

position:4355508:1
position: 4355508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4355576:1
position: 4355576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355508-4355576:1:exon

LOC117723698
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723698
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
pseudo: true
SIO_010081: LOC117723698
subclass of: SO_0000673
so part of: LOC117723698
location: 4362551..4362652
location: region:4362551-4362652:1
so has part: feature:4362551-4362652:1:exon

position:4362551:1
position: 4362551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4362652:1
position: 4362652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4362551-4362652:1:exon

LOC117723698
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723698
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
pseudo: true
SIO_010081: LOC117723698
subclass of: SO_0000673
so part of: LOC117723698
location: 4379172..4379586
location: region:4379172-4379586:1
so has part: feature:4379172-4379586:1:exon

position:4379172:1
position: 4379172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4379172-4379586:1:exon

LOC117724090
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724090
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4690064..4690197)
location: region:4690064-4690197:-1
so has part: feature:4690064-4690197:-1:exon
subclass of: SO_0000578

117724090
type: Gene
SIO_000068: ncbigene

position:4690064:-1
position: 4690064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4690197:-1
position: 4690197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4690064-4690197:-1:exon

LOC117724090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117724090
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608775.1
SIO_010081: LOC117724090
subclass of: SO_0000673
so part of: LOC117724090
location: complement(4690064..4690197)
location: region:4690064-4690197:-1
so has part: feature:4690064-4690197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4690064-4690197:-1:exon

LOC117723963
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4966566..4967761)
location: region:4966566-4967761:-1
so has part: feature:4966566-4967761:-1:exon
subclass of: SO_0000010

117723963
type: Gene
SIO_000068: ncbigene

position:4966566:-1
position: 4966566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4967761:-1
position: 4967761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4966566-4967761:-1:exon

LOC117723963
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723963
product: U1 small nuclear ribonucleoprotein A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523562.1
SIO_010081: LOC117723963
subclass of: SO_0000673
so part of: LOC117723963
location: complement(4966566..4967761)
location: region:4966566-4967761:-1
so has part: feature:4966566-4967761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4966566-4967761:-1:exon

LOC117723963
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U1 small nuclear ribonucleoprotein A-like
translation: MAVPETRPNHTMYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDHKREKRKPKSQETPAAKKAVQGGAAAPVVGAVQPVPGMPPMTQAPRIMHHMPGQPPYMPPPGMIPPPGLAPAQIPPGAMPPQRLMPGQMPPAQPLSENLPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVEFDNEV
SIO_010081: LOC117723963
subclass of: SO_0000673
so part of: LOC117723963
location: complement(4966849..4967613)
location: region:4966849-4967613:-1
so has part: feature:4966849-4967613:-1:exon

XP_034379453.1
type: Protein
SIO_000068: ncbiprotein

position:4966849:-1
position: 4966849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4967613:-1
position: 4967613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4966849-4967613:-1:exon

Med10
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Med10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5049551..5063003)
location: region:5049551-5063003:-1
so has part: feature:5049551-5063003:-1:exon
subclass of: SO_0000010

117723737
type: Gene
SIO_000068: ncbigene

position:5049551:-1
position: 5049551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5063003:-1
position: 5063003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5049551-5063003:-1:exon

Med10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Med10
product: mediator complex subunit 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 2 long SRA reads, 8 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523267.1
SIO_010081: Med10
subclass of: SO_0000673
so part of: Med10
location: complement(join(5049551..5050066,5051739..5051841,5053628..5053711,5055327..5055580,5062782..5063003))
location: region:5049551-5063003:-1
so has part: feature:5062782-5063003:-1:exon
so has part: feature:5055327-5055580:-1:exon
so has part: feature:5053628-5053711:-1:exon
so has part: feature:5051739-5051841:-1:exon
so has part: feature:5049551-5050066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5062782-5063003:-1:exon

position:5062782:-1
position: 5062782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5055327-5055580:-1:exon

position:5055327:-1
position: 5055327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5055580:-1
position: 5055580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5053628-5053711:-1:exon

position:5053628:-1
position: 5053628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5053711:-1
position: 5053711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5051739-5051841:-1:exon

position:5051739:-1
position: 5051739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5051841:-1
position: 5051841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5049551-5050066:-1:exon

position:5050066:-1
position: 5050066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Med10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Med10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 10
translation: MSREDMQQNFLGMRHRAQQSDPAPGEAPPSRKRKWASGSRKRASAVEPESLGAVAKRRAEPAMAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLSQKLNYIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRGEDHPPS
SIO_010081: Med10
subclass of: SO_0000673
so part of: Med10
location: complement(join(5049968..5050066,5051739..5051841,5053628..5053711,5055327..5055580,5062782..5062835))
location: region:5049968-5062835:-1
so has part: feature:5062782-5062835:-1:exon
so has part: feature:5055327-5055580:-1:exon
so has part: feature:5053628-5053711:-1:exon
so has part: feature:5051739-5051841:-1:exon
so has part: feature:5049968-5050066:-1:exon

XP_034379158.1
type: Protein
SIO_000068: ncbiprotein

position:5049968:-1
position: 5049968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5062835:-1
position: 5062835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5062782-5062835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5055327-5055580:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5053628-5053711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5051739-5051841:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5049968-5050066:-1:exon

Ube2ql1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ube2ql1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5127471..5166487
location: region:5127471-5166487:1
so has part: feature:5127471-5166487:1:exon
subclass of: SO_0000010

117724063
type: Gene
SIO_000068: ncbigene

position:5127471:1
position: 5127471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5166487:1
position: 5166487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5127471-5166487:1:exon

Ube2ql1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ube2ql1
product: ubiquitin conjugating enzyme E2 Q family like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 2 long SRA reads, 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034523697.1
SIO_010081: Ube2ql1
subclass of: SO_0000673
so part of: Ube2ql1
location: join(5127471..5128809,5165142..5166487)
location: region:5127471-5166487:1
so has part: feature:5127471-5128809:1:exon
so has part: feature:5165142-5166487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5127471-5128809:1:exon

position:5128809:1
position: 5128809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5165142-5166487:1:exon

position:5165142:1
position: 5165142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ube2ql1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ube2ql1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2Q-like protein 1
translation: MATLLRKIGLIRLHNRDTEDPKHHHNHRGGGGGQQSASLRGKGGGKSGGHKQQQQQQHPGGSGDASPGPGKGKSKRAAELAARDKQPQPAAGAAGAAGAGGPRERAAGARAGPGPAVAAAAAGGSLVPAARQQHCTQVRSRRLMKELQDIARLSDRFISVELVNENLFDWNVKLHQVDKDSVLWQDMKETNTEFILLNLTFPDNFPFSPPFMRVLSPRLENGYVLDGGAICMELLTPRGWSSAYTVEAVMRQFAASLVKGQGRICRKAGKSKKSFSRKEAEATFKSLVKTHEKYGWVTPPVSDG
SIO_010081: Ube2ql1
subclass of: SO_0000673
so part of: Ube2ql1
location: join(5128027..5128809,5165142..5165273)
location: region:5128027-5165273:1
so has part: feature:5128027-5128809:1:exon
so has part: feature:5165142-5165273:1:exon

XP_034379588.1
type: Protein
SIO_000068: ncbiprotein

position:5128027:1
position: 5128027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5165273:1
position: 5165273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5128027-5128809:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5165142-5165273:1:exon

LOC117724064
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724064
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5152439..5155158
location: region:5152439-5155158:1
so has part: feature:5152439-5155158:1:exon

117724064
type: Gene
SIO_000068: ncbigene

position:5152439:1
position: 5152439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5155158:1
position: 5155158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5152439-5155158:1:exon

LOC117724064
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117724064
subclass of: SO_0000673
so part of: LOC117724064
location: 5152439..5153067
location: region:5152439-5153067:1
so has part: feature:5152439-5153067:1:exon

position:5153067:1
position: 5153067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5152439-5153067:1:exon

LOC117724064
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117724064
subclass of: SO_0000673
so part of: LOC117724064
location: 5155145..5155158
location: region:5155145-5155158:1
so has part: feature:5155145-5155158:1:exon

position:5155145:1
position: 5155145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5155145-5155158:1:exon

Nsun2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Nsun2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5226801..5246775)
location: region:5226801-5246775:-1
so has part: feature:5226801-5246775:-1:exon
subclass of: SO_0000010

117723946
type: Gene
SIO_000068: ncbigene

position:5226801:-1
position: 5226801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5246775:-1
position: 5246775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5226801-5246775:-1:exon

Nsun2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nsun2
product: NOP2/Sun RNA methyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 mRNAs, 6 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523544.1
SIO_010081: Nsun2
subclass of: SO_0000673
so part of: Nsun2
location: complement(join(5226801..5227591,5227902..5227941,5229483..5229621,5229825..5229905,5230388..5230523,5231088..5231180,5231459..5231640,5233804..5233900,5234305..5234435,5234910..5234983,5237136..5237266,5238569..5238643,5240523..5240715,5241809..5241893,5242562..5242633,5243379..5243484,5245686..5245790,5246333..5246490,5246599..5246775))
location: region:5226801-5246775:-1
so has part: feature:5246599-5246775:-1:exon
so has part: feature:5246333-5246490:-1:exon
so has part: feature:5245686-5245790:-1:exon
so has part: feature:5243379-5243484:-1:exon
so has part: feature:5242562-5242633:-1:exon
so has part: feature:5241809-5241893:-1:exon
so has part: feature:5240523-5240715:-1:exon
so has part: feature:5238569-5238643:-1:exon
so has part: feature:5237136-5237266:-1:exon
so has part: feature:5234910-5234983:-1:exon
so has part: feature:5234305-5234435:-1:exon
so has part: feature:5233804-5233900:-1:exon
so has part: feature:5231459-5231640:-1:exon
so has part: feature:5231088-5231180:-1:exon
so has part: feature:5230388-5230523:-1:exon
so has part: feature:5229825-5229905:-1:exon
so has part: feature:5229483-5229621:-1:exon
so has part: feature:5227902-5227941:-1:exon
so has part: feature:5226801-5227591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5246599-5246775:-1:exon

position:5246599:-1
position: 5246599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5246333-5246490:-1:exon

position:5246333:-1
position: 5246333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5246490:-1
position: 5246490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5245686-5245790:-1:exon

position:5245686:-1
position: 5245686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5245790:-1
position: 5245790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5243379-5243484:-1:exon

position:5243379:-1
position: 5243379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5243484:-1
position: 5243484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5242562-5242633:-1:exon

position:5242562:-1
position: 5242562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5242633:-1
position: 5242633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5241809-5241893:-1:exon

position:5241809:-1
position: 5241809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5241893:-1
position: 5241893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5240523-5240715:-1:exon

position:5240523:-1
position: 5240523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5240715:-1
position: 5240715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5238569-5238643:-1:exon

position:5238569:-1
position: 5238569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5238643:-1
position: 5238643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5237136-5237266:-1:exon

position:5237136:-1
position: 5237136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5237266:-1
position: 5237266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5234910-5234983:-1:exon

position:5234910:-1
position: 5234910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5234983:-1
position: 5234983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5234305-5234435:-1:exon

position:5234305:-1
position: 5234305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5234435:-1
position: 5234435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5233804-5233900:-1:exon

position:5233804:-1
position: 5233804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5233900:-1
position: 5233900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5231459-5231640:-1:exon

position:5231459:-1
position: 5231459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5231640:-1
position: 5231640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5231088-5231180:-1:exon

position:5231088:-1
position: 5231088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5231180:-1
position: 5231180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5230388-5230523:-1:exon

position:5230388:-1
position: 5230388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5230523:-1
position: 5230523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5229825-5229905:-1:exon

position:5229825:-1
position: 5229825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5229905:-1
position: 5229905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5229483-5229621:-1:exon

position:5229483:-1
position: 5229483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5229621:-1
position: 5229621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5227902-5227941:-1:exon

position:5227902:-1
position: 5227902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5227941:-1
position: 5227941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5226801-5227591:-1:exon

position:5227591:-1
position: 5227591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nsun2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nsun2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA cytosine C(5)-methyltransferase NSUN2
translation: MQPEVQRACCVVACCLRSACSAAWAMGRRARGRRCQQPTQPEGEEDGSDGGRKRGQAGWEGGYPEIIKENKLFEHYYQELKIVPEGEWDQFMGSLREPLPATLRITGYKSHAKEILHCLKNKYFKELEDLEVDGQKVEVPQPLSWYPEELAWHTNLSRKILRKSPLLAKFHQFLVSETESGNISRQEAVSMIPPLLLNVEPHHKILDMCAAPGSKTTQLIEMLHADMSVPFPEGFVIANDVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLTVDVDGRKEILFYDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPVEDEAVIAALLEKSEGALELADVSAELPGLKWMPGVSQWKVMTRDGQWFADWHEVPQGRHTQIRPTMFPPKDLEKLQAMHLERCLRILPHHQNTGGFFVAVLIKKAPMPWNKRQPKVQSKSAEAREPRASSPATSTEGNPSDPSELGNQMITGTGDSEGAHTTENTESNEKKDGVCGPPPSKKMKLFGFKEDPFVFIPEDDPLFPPIEKFYALDPSFPRMNLLTRTTEGKKRQLYMVSKELRNVLLNNSEKMKVINTGIKVWRRNNSGEEFDCAFRLAQEGIYTLYPFIKSRIITVSMEDVKTLLTQENPFFRKLSSEAYNQVKDLTKGSVVLKYEPDSANPDTLQCPIVLCGWRGKTSIRTFVPKNERLHYLRMMGVEVLGEKKNEGVILTNESAASPEQPEDEEDAKQTAEDSCIPDSATACDPGAAEPSR
SIO_010081: Nsun2
subclass of: SO_0000673
so part of: Nsun2
location: complement(join(5227309..5227591,5227902..5227941,5229483..5229621,5229825..5229905,5230388..5230523,5231088..5231180,5231459..5231640,5233804..5233900,5234305..5234435,5234910..5234983,5237136..5237266,5238569..5238643,5240523..5240715,5241809..5241893,5242562..5242633,5243379..5243484,5245686..5245790,5246333..5246490,5246599..5246769))
location: region:5227309-5246769:-1
so has part: feature:5246599-5246769:-1:exon
so has part: feature:5246333-5246490:-1:exon
so has part: feature:5245686-5245790:-1:exon
so has part: feature:5243379-5243484:-1:exon
so has part: feature:5242562-5242633:-1:exon
so has part: feature:5241809-5241893:-1:exon
so has part: feature:5240523-5240715:-1:exon
so has part: feature:5238569-5238643:-1:exon
so has part: feature:5237136-5237266:-1:exon
so has part: feature:5234910-5234983:-1:exon
so has part: feature:5234305-5234435:-1:exon
so has part: feature:5233804-5233900:-1:exon
so has part: feature:5231459-5231640:-1:exon
so has part: feature:5231088-5231180:-1:exon
so has part: feature:5230388-5230523:-1:exon
so has part: feature:5229825-5229905:-1:exon
so has part: feature:5229483-5229621:-1:exon
so has part: feature:5227902-5227941:-1:exon
so has part: feature:5227309-5227591:-1:exon

XP_034379435.1
type: Protein
SIO_000068: ncbiprotein

position:5227309:-1
position: 5227309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5246769:-1
position: 5246769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5246599-5246769:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5246333-5246490:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5245686-5245790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5243379-5243484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5242562-5242633:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5241809-5241893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5240523-5240715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5238569-5238643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5237136-5237266:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5234910-5234983:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5234305-5234435:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5233804-5233900:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5231459-5231640:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5231088-5231180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5230388-5230523:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5229825-5229905:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5229483-5229621:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5227902-5227941:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5227309-5227591:-1:exon

Srd5a1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Srd5a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5247335..5280607
location: region:5247335-5280607:1
so has part: feature:5247335-5280607:1:exon
subclass of: SO_0000010

117724055
type: Gene
SIO_000068: ncbigene

position:5247335:1
position: 5247335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5280607:1
position: 5280607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5247335-5280607:1:exon

Srd5a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Srd5a1
product: steroid 5 alpha-reductase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523689.1
SIO_010081: Srd5a1
subclass of: SO_0000673
so part of: Srd5a1
location: join(5247335..5247821,5258173..5258339,5263553..5263654,5270767..5270917,5279961..5280607)
location: region:5247335-5280607:1
so has part: feature:5247335-5247821:1:exon
so has part: feature:5258173-5258339:1:exon
so has part: feature:5263553-5263654:1:exon
so has part: feature:5270767-5270917:1:exon
so has part: feature:5279961-5280607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5247335-5247821:1:exon

position:5247821:1
position: 5247821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5258173-5258339:1:exon

position:5258173:1
position: 5258173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5258339:1
position: 5258339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5263553-5263654:1:exon

position:5263553:1
position: 5263553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5263654:1
position: 5263654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5270767-5270917:1:exon

position:5270767:1
position: 5270767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5270917:1
position: 5270917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5279961-5280607:1:exon

position:5279961:1
position: 5279961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Srd5a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Srd5a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 3-oxo-5-alpha-steroid 4-dehydrogenase 1
translation: MELDELCLLDALAYVEGFMAFVAFVGLQLVGSSYGRYSPQWSGRRVPARPAWFLQELPSLAWPLYECIRPAAIQLGNLPNRILLAMFLIHYVQRTLVFPVLIRGGKPTLLFTFVLAFLFCTFNGYLQSRYLSQFAVYAEDWVTHPCFLTGFVLWLVGMVINIHSDHILRNLRKPGETGYKIPRGGLFEYVSAANYFGELVEWCGFALASWSLRAVVFALFTLCALLTRAKQHHQWYHEKFEDYPKSRKILIPFLL
SIO_010081: Srd5a1
subclass of: SO_0000673
so part of: Srd5a1
location: join(5247541..5247821,5258173..5258339,5263553..5263654,5270767..5270917,5279961..5280027)
location: region:5247541-5280027:1
so has part: feature:5247541-5247821:1:exon
so has part: feature:5258173-5258339:1:exon
so has part: feature:5263553-5263654:1:exon
so has part: feature:5270767-5270917:1:exon
so has part: feature:5279961-5280027:1:exon

XP_034379580.1
type: Protein
SIO_000068: ncbiprotein

position:5247541:1
position: 5247541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5280027:1
position: 5280027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5247541-5247821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5258173-5258339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5263553-5263654:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5270767-5270917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5279961-5280027:1:exon

LOC117723699
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5307563..5314251)
location: region:5307563-5314251:-1
so has part: feature:5307563-5314251:-1:exon

117723699
type: Gene
SIO_000068: ncbigene

position:5307563:-1
position: 5307563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5314251:-1
position: 5314251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5307563-5314251:-1:exon

LOC117723699
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723699
subclass of: SO_0000673
so part of: LOC117723699
location: complement(5307563..5307633)
location: region:5307563-5307633:-1
so has part: feature:5307563-5307633:-1:exon

position:5307633:-1
position: 5307633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5307563-5307633:-1:exon

LOC117723699
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723699
subclass of: SO_0000673
so part of: LOC117723699
location: complement(5307967..5308650)
location: region:5307967-5308650:-1
so has part: feature:5307967-5308650:-1:exon

position:5307967:-1
position: 5307967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5308650:-1
position: 5308650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5307967-5308650:-1:exon

LOC117723699
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723699
subclass of: SO_0000673
so part of: LOC117723699
location: complement(5314208..5314251)
location: region:5314208-5314251:-1
so has part: feature:5314208-5314251:-1:exon

position:5314208:-1
position: 5314208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5314208-5314251:-1:exon

Tent4a
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tent4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5316065..5358269
location: region:5316065-5358269:1
so has part: feature:5316065-5358269:1:exon
subclass of: SO_0000010

117723701
type: Gene
SIO_000068: ncbigene

position:5316065:1
position: 5316065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5358269:1
position: 5358269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5316065-5358269:1:exon

Tent4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tent4a
product: terminal nucleotidyltransferase 4A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523249.1
SIO_010081: Tent4a
subclass of: SO_0000673
so part of: Tent4a
location: join(5316065..5316136,5342544..5342590,5343655..5343775,5346225..5346332,5347283..5347411,5349920..5350133,5351558..5351684,5352589..5352689,5353250..5353422,5353897..5354055,5355612..5355776,5356131..5358269)
location: region:5316065-5358269:1
so has part: feature:5316065-5316136:1:exon
so has part: feature:5342544-5342590:1:exon
so has part: feature:5343655-5343775:1:exon
so has part: feature:5346225-5346332:1:exon
so has part: feature:5347283-5347411:1:exon
so has part: feature:5349920-5350133:1:exon
so has part: feature:5351558-5351684:1:exon
so has part: feature:5352589-5352689:1:exon
so has part: feature:5353250-5353422:1:exon
so has part: feature:5353897-5354055:1:exon
so has part: feature:5355612-5355776:1:exon
so has part: feature:5356131-5358269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5316065-5316136:1:exon

position:5316136:1
position: 5316136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5342544-5342590:1:exon

position:5342544:1
position: 5342544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5342590:1
position: 5342590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5343655-5343775:1:exon

position:5343655:1
position: 5343655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5343775:1
position: 5343775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5346225-5346332:1:exon

position:5346225:1
position: 5346225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5346332:1
position: 5346332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5347283-5347411:1:exon

position:5347283:1
position: 5347283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5347411:1
position: 5347411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5349920-5350133:1:exon

position:5349920:1
position: 5349920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5350133:1
position: 5350133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5351558-5351684:1:exon

position:5351558:1
position: 5351558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5351684:1
position: 5351684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5352589-5352689:1:exon

position:5352589:1
position: 5352589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5352689:1
position: 5352689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5353250-5353422:1:exon

position:5353250:1
position: 5353250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5353422:1
position: 5353422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5353897-5354055:1:exon

position:5353897:1
position: 5353897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5354055:1
position: 5354055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5355612-5355776:1:exon

position:5355612:1
position: 5355612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5355776:1
position: 5355776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5356131-5358269:1:exon

position:5356131:1
position: 5356131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tent4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tent4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: terminal nucleotidyltransferase 4A
translation: MRSQPENAANLADSAVGSVQGQPVVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQLLEQALRKHNVAEPCSIKVLDKATVPIIKLTDQETEVKVDISFNMETGVRAAEFIKNYMKKYSLLPYLILVLKQFLLQRDLNEVFTGGISSYSLILMAISFLQLHPRIDARRADENLGMLLVEFFELYGRNFNYLKTGIRIKEGGAYIAKEEVMKAMTSGYRPSMLCIEDPLLPGNDVGRSSYGAMQVKQVFDYAYIVLSHAVSPLARSYPNRDSESTLGRIIKVTQEVIDYRRWIKEKWGSRILPSPDLDNRIKIKERIPTCNGEQMQSREPSSPYSQRLTLSLSSSQLLSSGSSASSVSSLSGSDIDSDTPPCTTPSVYQFSLQAPTTLMASLPTALPMPSSKPQPAASRTLIMTTNNQTRVTIPPPTLGVAPVPCRQAGVDGTTSLKAVHNVTSPAIPSASPNPLSSPHLYHKQHNGMKLSMKGSHNHTQGGGYSSVGSGAVRPPVGNRGHHQYNRTGWRRKKHAHTRDSLPVSLSR
SIO_010081: Tent4a
subclass of: SO_0000673
so part of: Tent4a
location: join(5316065..5316136,5342544..5342590,5343655..5343775,5346225..5346332,5347283..5347411,5349920..5350133,5351558..5351684,5352589..5352689,5353250..5353422,5353897..5354055,5355612..5355776,5356131..5356325)
location: region:5316065-5356325:1
so has part: feature:5316065-5316136:1:exon
so has part: feature:5342544-5342590:1:exon
so has part: feature:5343655-5343775:1:exon
so has part: feature:5346225-5346332:1:exon
so has part: feature:5347283-5347411:1:exon
so has part: feature:5349920-5350133:1:exon
so has part: feature:5351558-5351684:1:exon
so has part: feature:5352589-5352689:1:exon
so has part: feature:5353250-5353422:1:exon
so has part: feature:5353897-5354055:1:exon
so has part: feature:5355612-5355776:1:exon
so has part: feature:5356131-5356325:1:exon

XP_034379140.1
type: Protein
SIO_000068: ncbiprotein

position:5356325:1
position: 5356325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5316065-5316136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5342544-5342590:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5343655-5343775:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5346225-5346332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5347283-5347411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5349920-5350133:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5351558-5351684:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5352589-5352689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5353250-5353422:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5353897-5354055:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5355612-5355776:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5356131-5356325:1:exon

LOC117723702
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5430489..5478552
location: region:5430489-5478552:1
so has part: feature:5430489-5478552:1:exon

117723702
type: Gene
SIO_000068: ncbigene

position:5430489:1
position: 5430489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5478552:1
position: 5478552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5430489-5478552:1:exon

LOC117723702
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723702
subclass of: SO_0000673
so part of: LOC117723702
location: 5430489..5430570
location: region:5430489-5430570:1
so has part: feature:5430489-5430570:1:exon

position:5430570:1
position: 5430570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5430489-5430570:1:exon

LOC117723702
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723702
subclass of: SO_0000673
so part of: LOC117723702
location: 5438997..5439949
location: region:5438997-5439949:1
so has part: feature:5438997-5439949:1:exon

position:5438997:1
position: 5438997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5439949:1
position: 5439949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5438997-5439949:1:exon

LOC117723702
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723702
subclass of: SO_0000673
so part of: LOC117723702
location: 5440342..5440411
location: region:5440342-5440411:1
so has part: feature:5440342-5440411:1:exon

position:5440342:1
position: 5440342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5440411:1
position: 5440411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5440342-5440411:1:exon

LOC117723702
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723702
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723702
subclass of: SO_0000673
so part of: LOC117723702
location: 5478199..5478552
location: region:5478199-5478552:1
so has part: feature:5478199-5478552:1:exon

position:5478199:1
position: 5478199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5478199-5478552:1:exon

LOC117723886
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5811369..5811939)
location: region:5811369-5811939:-1
so has part: feature:5811369-5811939:-1:exon

117723886
type: Gene
SIO_000068: ncbigene

position:5811369:-1
position: 5811369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5811939:-1
position: 5811939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5811369-5811939:-1:exon

LOC117723886
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723886
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723886
subclass of: SO_0000673
so part of: LOC117723886
location: complement(5811369..5811939)
location: region:5811369-5811939:-1
so has part: feature:5811369-5811939:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5811369-5811939:-1:exon

Adcy2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Adcy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5826533..6185381
location: region:5826533-6185381:1
so has part: feature:5826533-6185381:1:exon
subclass of: SO_0000010

117723703
type: Gene
SIO_000068: ncbigene

position:5826533:1
position: 5826533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6185381:1
position: 6185381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5826533-6185381:1:exon

Adcy2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Adcy2
product: adenylate cyclase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523250.1
SIO_010081: Adcy2
subclass of: SO_0000673
so part of: Adcy2
location: join(5826533..5826788,5843206..5843403,5929657..5929818,6021192..6021341,6076859..6077007,6082591..6082702,6085405..6085532,6086960..6087118,6088090..6088222,6089476..6089652,6092725..6092768,6096278..6096358,6103337..6103406,6106526..6106623,6108151..6108232,6136714..6136833,6139983..6140152,6151155..6151239,6157389..6157547,6163308..6163454,6165067..6165174,6174684..6174798,6180114..6180238,6184559..6185381)
location: region:5826533-6185381:1
so has part: feature:5826533-5826788:1:exon
so has part: feature:5843206-5843403:1:exon
so has part: feature:5929657-5929818:1:exon
so has part: feature:6021192-6021341:1:exon
so has part: feature:6076859-6077007:1:exon
so has part: feature:6082591-6082702:1:exon
so has part: feature:6085405-6085532:1:exon
so has part: feature:6086960-6087118:1:exon
so has part: feature:6088090-6088222:1:exon
so has part: feature:6089476-6089652:1:exon
so has part: feature:6092725-6092768:1:exon
so has part: feature:6096278-6096358:1:exon
so has part: feature:6103337-6103406:1:exon
so has part: feature:6106526-6106623:1:exon
so has part: feature:6108151-6108232:1:exon
so has part: feature:6136714-6136833:1:exon
so has part: feature:6139983-6140152:1:exon
so has part: feature:6151155-6151239:1:exon
so has part: feature:6157389-6157547:1:exon
so has part: feature:6163308-6163454:1:exon
so has part: feature:6165067-6165174:1:exon
so has part: feature:6174684-6174798:1:exon
so has part: feature:6180114-6180238:1:exon
so has part: feature:6184559-6185381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5826533-5826788:1:exon

position:5826788:1
position: 5826788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5843206-5843403:1:exon

position:5843206:1
position: 5843206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5843403:1
position: 5843403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5929657-5929818:1:exon

position:5929657:1
position: 5929657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5929818:1
position: 5929818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6021192-6021341:1:exon

position:6021192:1
position: 6021192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6021341:1
position: 6021341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6076859-6077007:1:exon

position:6076859:1
position: 6076859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6077007:1
position: 6077007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6082591-6082702:1:exon

position:6082591:1
position: 6082591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6082702:1
position: 6082702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6085405-6085532:1:exon

position:6085405:1
position: 6085405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6085532:1
position: 6085532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6086960-6087118:1:exon

position:6086960:1
position: 6086960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6087118:1
position: 6087118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6088090-6088222:1:exon

position:6088090:1
position: 6088090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6088222:1
position: 6088222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6089476-6089652:1:exon

position:6089476:1
position: 6089476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6089652:1
position: 6089652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6092725-6092768:1:exon

position:6092725:1
position: 6092725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6092768:1
position: 6092768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6096278-6096358:1:exon

position:6096278:1
position: 6096278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6096358:1
position: 6096358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6103337-6103406:1:exon

position:6103337:1
position: 6103337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6103406:1
position: 6103406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6106526-6106623:1:exon

position:6106526:1
position: 6106526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6106623:1
position: 6106623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6108151-6108232:1:exon

position:6108151:1
position: 6108151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6108232:1
position: 6108232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6136714-6136833:1:exon

position:6136714:1
position: 6136714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6136833:1
position: 6136833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6139983-6140152:1:exon

position:6139983:1
position: 6139983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6140152:1
position: 6140152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6151155-6151239:1:exon

position:6151155:1
position: 6151155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6151239:1
position: 6151239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6157389-6157547:1:exon

position:6157389:1
position: 6157389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6157547:1
position: 6157547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6163308-6163454:1:exon

position:6163308:1
position: 6163308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6163454:1
position: 6163454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6165067-6165174:1:exon

position:6165067:1
position: 6165067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6165174:1
position: 6165174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6174684-6174798:1:exon

position:6174684:1
position: 6174684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6174798:1
position: 6174798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6180114-6180238:1:exon

position:6180114:1
position: 6180114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6180238:1
position: 6180238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6184559-6185381:1:exon

position:6184559:1
position: 6184559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Adcy2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Adcy2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adenylate cyclase type 2
translation: MWQEAMRRRRYLRDRAEAAAAAAAGGGEGLQRSRDWLYESYYCMSQQHPLIVFLLLIVMGACLALLAVFFALGLEVEDHVAFLITVPTALAIFFAIFILVCIESVFKKLLRVFSLVIWICLVAMGYLFMCFGGTVSAWDQVSFFLFIIFVVYTMLPFNMRDAIIASVLTSSSHTIVLSVYLSATPGAKEHLFWQILANVIIFICGNLAGAYHKHLMELALQQTYRDTCNCIKSRIKLEFEKRQQERLLLSLLPAHIAMEMKAEIIQRLQGPKAGQMENTNNFHNLYVKRHTNVSILYADIVGFTRLASDCSPGELVHMLNELFGKFDQIAKENECMRIKILGDCYYCVSGLPISLPNHAKNCVKMGLDMCEAIKKVRDATGVDINMRVGVHSGNVLCGVIGLQKWQYDVWSHDVTLANHMEAGGVPGRVHISSVTLEHLNGAYKVEEGDGEIRDPYLKQHLVKTYFVINPKGERRSPQHLFRPRHTLDGAKMRASVRMTRYLESWGAAKPFAHLHHRDSMTTENGKISTTDVPMGQHNFQNRTLRTKSQKKRFEEELNERMIQAIDGINAQKQWLKSEDIQRISLLFYNKNIEKEYRATALPAFKYYVTCACLIFLCIFLVQILVLPKSPPMNRKRFQPSDKGKWRSLMGINRVLFFLSNSAETTLPTANTSNANVSVPDNQAAILHARNLFFLPYFIYSCILGLISCSVFLRVNYELKMLIMMVALVGYNTILLHTHAHVLDAYSQVLFQRPGIWKDLKTMGSVSLSIFFITLLVLGRQSEYYCRLDFLWKNKFKKEREEIETMENLNRVLLENVLPAHVAEHFLARSLKNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAVPSQEHAQEPERQYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYTCTCRGIINVKGKGDLKTYFVNTEMSRSLSQSNLAS
SIO_010081: Adcy2
subclass of: SO_0000673
so part of: Adcy2
location: join(5826567..5826788,5843206..5843403,5929657..5929818,6021192..6021341,6076859..6077007,6082591..6082702,6085405..6085532,6086960..6087118,6088090..6088222,6089476..6089652,6092725..6092768,6096278..6096358,6103337..6103406,6106526..6106623,6108151..6108232,6136714..6136833,6139983..6140152,6151155..6151239,6157389..6157547,6163308..6163454,6165067..6165174,6174684..6174798,6180114..6180238,6184559..6184711)
location: region:5826567-6184711:1
so has part: feature:5826567-5826788:1:exon
so has part: feature:5843206-5843403:1:exon
so has part: feature:5929657-5929818:1:exon
so has part: feature:6021192-6021341:1:exon
so has part: feature:6076859-6077007:1:exon
so has part: feature:6082591-6082702:1:exon
so has part: feature:6085405-6085532:1:exon
so has part: feature:6086960-6087118:1:exon
so has part: feature:6088090-6088222:1:exon
so has part: feature:6089476-6089652:1:exon
so has part: feature:6092725-6092768:1:exon
so has part: feature:6096278-6096358:1:exon
so has part: feature:6103337-6103406:1:exon
so has part: feature:6106526-6106623:1:exon
so has part: feature:6108151-6108232:1:exon
so has part: feature:6136714-6136833:1:exon
so has part: feature:6139983-6140152:1:exon
so has part: feature:6151155-6151239:1:exon
so has part: feature:6157389-6157547:1:exon
so has part: feature:6163308-6163454:1:exon
so has part: feature:6165067-6165174:1:exon
so has part: feature:6174684-6174798:1:exon
so has part: feature:6180114-6180238:1:exon
so has part: feature:6184559-6184711:1:exon

XP_034379141.1
type: Protein
SIO_000068: ncbiprotein

position:5826567:1
position: 5826567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6184711:1
position: 6184711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5826567-5826788:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5843206-5843403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5929657-5929818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6021192-6021341:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6076859-6077007:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6082591-6082702:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6085405-6085532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6086960-6087118:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6088090-6088222:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6089476-6089652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6092725-6092768:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6096278-6096358:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6103337-6103406:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6106526-6106623:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6108151-6108232:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6136714-6136833:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6139983-6140152:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6151155-6151239:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6157389-6157547:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6163308-6163454:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6165067-6165174:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6174684-6174798:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6180114-6180238:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6184559-6184711:1:exon

C19H5orf49
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: C19H5orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6189133..6208162)
location: region:6189133-6208162:-1
so has part: feature:6189133-6208162:-1:exon
subclass of: SO_0000010

117724053
type: Gene
SIO_000068: ncbigene

position:6189133:-1
position: 6189133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6208162:-1
position: 6208162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6189133-6208162:-1:exon

C19H5orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C19H5orf49
product: chromosome 19 C5orf49 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034523687.1
SIO_010081: C19H5orf49
subclass of: SO_0000673
so part of: C19H5orf49
location: complement(join(6189133..6189589,6191469..6191585,6207807..6208162))
location: region:6189133-6208162:-1
so has part: feature:6207807-6208162:-1:exon
so has part: feature:6191469-6191585:-1:exon
so has part: feature:6189133-6189589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6207807-6208162:-1:exon

position:6207807:-1
position: 6207807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6191469-6191585:-1:exon

position:6191469:-1
position: 6191469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6191585:-1
position: 6191585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6189133-6189589:-1:exon

position:6189589:-1
position: 6189589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C19H5orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C19H5orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C5orf49 homolog
translation: MEGPTKKEQRAIDPGGVKEKKGNVEEGAGEEKIEEEEVEDEEEITAETLRGKPRSLPISALPAFSYIPPRHQGPKERSYFGREGQTGIVSLYDCVFKRRLDYNQKLHRDDREHAKNLGLHISEEEQERVVPVLMSSVYGKRISQPIEPLNRDYGHVNHVQTDFYRKNDIPSLKEPGFGHINPA
SIO_010081: C19H5orf49
subclass of: SO_0000673
so part of: C19H5orf49
location: complement(join(6189410..6189589,6191469..6191585,6207807..6208061))
location: region:6189410-6208061:-1
so has part: feature:6207807-6208061:-1:exon
so has part: feature:6191469-6191585:-1:exon
so has part: feature:6189410-6189589:-1:exon

XP_034379578.1
type: Protein
SIO_000068: ncbiprotein

position:6189410:-1
position: 6189410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6208061:-1
position: 6208061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6207807-6208061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6191469-6191585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6189410-6189589:-1:exon

Fastkd3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Fastkd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6214142..6223936)
location: region:6214142-6223936:-1
so has part: feature:6214142-6223936:-1:exon
subclass of: SO_0000010

117724052
type: Gene
SIO_000068: ncbigene

position:6214142:-1
position: 6214142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6223936:-1
position: 6223936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6214142-6223936:-1:exon

Fastkd3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fastkd3
product: FAST kinase domains 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034523686.1
SIO_010081: Fastkd3
subclass of: SO_0000673
so part of: Fastkd3
location: complement(join(6214142..6214545,6215468..6215582,6216612..6216681,6218152..6218326,6220863..6220948,6221145..6222608,6223809..6223936))
location: region:6214142-6223936:-1
so has part: feature:6223809-6223936:-1:exon
so has part: feature:6221145-6222608:-1:exon
so has part: feature:6220863-6220948:-1:exon
so has part: feature:6218152-6218326:-1:exon
so has part: feature:6216612-6216681:-1:exon
so has part: feature:6215468-6215582:-1:exon
so has part: feature:6214142-6214545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6223809-6223936:-1:exon

position:6223809:-1
position: 6223809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6221145-6222608:-1:exon

position:6221145:-1
position: 6221145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6222608:-1
position: 6222608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6220863-6220948:-1:exon

position:6220863:-1
position: 6220863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6220948:-1
position: 6220948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6218152-6218326:-1:exon

position:6218152:-1
position: 6218152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6218326:-1
position: 6218326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6216612-6216681:-1:exon

position:6216612:-1
position: 6216612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6216681:-1
position: 6216681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6215468-6215582:-1:exon

position:6215468:-1
position: 6215468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6215582:-1
position: 6215582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6214142-6214545:-1:exon

position:6214545:-1
position: 6214545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fastkd3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: Fastkd3
product: FAST kinase domains 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004608756.1
SIO_010081: Fastkd3
so part of: Fastkd3
location: complement(join(6214142..6214545,6215468..6215582,6216612..6216791,6218152..6218326,6220863..6220948,6221145..6222608,6223809..6223936))
location: region:6214142-6223936:-1
so has part: feature:6223809-6223936:-1:exon
so has part: feature:6221145-6222608:-1:exon
so has part: feature:6220863-6220948:-1:exon
so has part: feature:6218152-6218326:-1:exon
so has part: feature:6216612-6216791:-1:exon
so has part: feature:6215468-6215582:-1:exon
so has part: feature:6214142-6214545:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6223809-6223936:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6221145-6222608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6220863-6220948:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6218152-6218326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6216612-6216791:-1:exon

position:6216791:-1
position: 6216791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6215468-6215582:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6214142-6214545:-1:exon

Fastkd3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fastkd3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAST kinase domain-containing protein 3, mitochondrial
translation: MAFITLRRAFCHTSVFWIPGAVVALKIHPASHAQKVVKDHLRVWFCSLQPEPSRVRFHHTYSKNFHSENGNDLHPVGEPWVSQPQEWNQPEQSLKNEDEEMVFRRLNSFSSFEEVLSFISTLDPLPVALAAAALLRICEIGNRDGEQRLPRGVLENRVFQALCLRCERDPSPLTNAGLVAALQSLLLLPPVDHQSHLILSLMAECQRRLRRGSLEVHHLCVLGESLVQLQGGSCETLKLVISHLQRENLETFAPEDIVSIYRILQACPEEVDGQQTFLNTVNQFSPSVVPYLSPKSISDVLSALVALDQTHARPLLIKLGKYVVRYIPRFTNAELRKVLEAFVYFGHSDRFFTEALEQHVAALCFALDPAVAISVMEYCSRKRILSKPILDVVAEIFVCQSEKFSPSQISELIEPFGKLNYLPPNAPALFRKVENVLSAQLHHFPPKMLLRLLHSCALIGCHPINFMSKIFSPFFLQRLQGKESYLDRLSLAQLTQLFLTSVLECPFYKGPRLLPKYQVKSFLTPCCSLETPMDLHLYKSVVIGLIDLLGSRLYFASKVLTPYCYTIDVEIKLDEDGFVLPSTVDEDIHKRVALCVDGPQRFCLDSKHLLGKEAIKQRHLRLLGYQVVRVPYHELELLTSRLELVEYLQRKLFSQSSTVHW
SIO_010081: Fastkd3
subclass of: SO_0000673
so part of: Fastkd3
location: complement(join(6214447..6214545,6215468..6215582,6216612..6216681,6218152..6218326,6220863..6220948,6221145..6222585))
location: region:6214447-6222585:-1
so has part: feature:6221145-6222585:-1:exon
so has part: feature:6220863-6220948:-1:exon
so has part: feature:6218152-6218326:-1:exon
so has part: feature:6216612-6216681:-1:exon
so has part: feature:6215468-6215582:-1:exon
so has part: feature:6214447-6214545:-1:exon

XP_034379577.1
type: Protein
SIO_000068: ncbiprotein

position:6214447:-1
position: 6214447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6222585:-1
position: 6222585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6221145-6222585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6220863-6220948:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6218152-6218326:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6216612-6216681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6215468-6215582:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6214447-6214545:-1:exon

Mtrr
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mtrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6224034..6245593
location: region:6224034-6245593:1
so has part: feature:6224034-6245593:1:exon
subclass of: SO_0000010

117724003
type: Gene
SIO_000068: ncbigene

position:6224034:1
position: 6224034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6245593:1
position: 6245593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6224034-6245593:1:exon

Mtrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mtrr
product: 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523622.1
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(6224034..6224089,6225015..6225179,6226714..6226867,6228472..6228589,6230652..6231024,6232335..6232457,6234658..6234811,6235929..6236017,6237074..6237254,6239565..6239607,6240282..6240468,6241461..6241579,6242041..6242133,6242234..6242416,6244661..6245593)
location: region:6224034-6245593:1
so has part: feature:6224034-6224089:1:exon
so has part: feature:6225015-6225179:1:exon
so has part: feature:6226714-6226867:1:exon
so has part: feature:6228472-6228589:1:exon
so has part: feature:6230652-6231024:1:exon
so has part: feature:6232335-6232457:1:exon
so has part: feature:6234658-6234811:1:exon
so has part: feature:6235929-6236017:1:exon
so has part: feature:6237074-6237254:1:exon
so has part: feature:6239565-6239607:1:exon
so has part: feature:6240282-6240468:1:exon
so has part: feature:6241461-6241579:1:exon
so has part: feature:6242041-6242133:1:exon
so has part: feature:6242234-6242416:1:exon
so has part: feature:6244661-6245593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6224034-6224089:1:exon

position:6224089:1
position: 6224089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6225015-6225179:1:exon

position:6225015:1
position: 6225015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6225179:1
position: 6225179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6226714-6226867:1:exon

position:6226714:1
position: 6226714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6226867:1
position: 6226867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6228472-6228589:1:exon

position:6228472:1
position: 6228472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6228589:1
position: 6228589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6230652-6231024:1:exon

position:6230652:1
position: 6230652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6231024:1
position: 6231024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6232335-6232457:1:exon

position:6232335:1
position: 6232335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6232457:1
position: 6232457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6234658-6234811:1:exon

position:6234658:1
position: 6234658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6234811:1
position: 6234811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6235929-6236017:1:exon

position:6235929:1
position: 6235929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6236017:1
position: 6236017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6237074-6237254:1:exon

position:6237074:1
position: 6237074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6237254:1
position: 6237254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6239565-6239607:1:exon

position:6239565:1
position: 6239565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6239607:1
position: 6239607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6240282-6240468:1:exon

position:6240282:1
position: 6240282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6240468:1
position: 6240468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6241461-6241579:1:exon

position:6241461:1
position: 6241461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6241579:1
position: 6241579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6242041-6242133:1:exon

position:6242041:1
position: 6242041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6242133:1
position: 6242133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6242234-6242416:1:exon

position:6242234:1
position: 6242234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6242416:1
position: 6242416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6244661-6245593:1:exon

position:6244661:1
position: 6244661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mtrr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mtrr
product: 5-methyltetrahydrofolate-homocysteine methyltransferase reductase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034523623.1
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(6224628..6224788,6225015..6225179,6226714..6226867,6228472..6228589,6230652..6231024,6232335..6232457,6234658..6234811,6235929..6236017,6237074..6237254,6239565..6239607,6240282..6240468,6241461..6241579,6242041..6242133,6242234..6242416,6244661..6245593)
location: region:6224628-6245593:1
so has part: feature:6224628-6224788:1:exon
so has part: feature:6225015-6225179:1:exon
so has part: feature:6226714-6226867:1:exon
so has part: feature:6228472-6228589:1:exon
so has part: feature:6230652-6231024:1:exon
so has part: feature:6232335-6232457:1:exon
so has part: feature:6234658-6234811:1:exon
so has part: feature:6235929-6236017:1:exon
so has part: feature:6237074-6237254:1:exon
so has part: feature:6239565-6239607:1:exon
so has part: feature:6240282-6240468:1:exon
so has part: feature:6241461-6241579:1:exon
so has part: feature:6242041-6242133:1:exon
so has part: feature:6242234-6242416:1:exon
so has part: feature:6244661-6245593:1:exon

position:6224628:1
position: 6224628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6224628-6224788:1:exon

position:6224788:1
position: 6224788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6225015-6225179:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6226714-6226867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6228472-6228589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6230652-6231024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6232335-6232457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6234658-6234811:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6235929-6236017:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6237074-6237254:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6239565-6239607:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6240282-6240468:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6241461-6241579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6242041-6242133:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6242234-6242416:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6244661-6245593:1:exon

Mtrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mtrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine synthase reductase
translation: MRRFLLLYATQRGQAKAIAEEISEQAVSHGFSADLHCVSESEKYDLKTETGPLVMVVSTTGTGDPPDTARKFVKEIHNKTLPTDFFAHLRYGLLGLGDSEYTYFCNGGKVIDKRLQELGAQHFYDTGHADDCVGLELVVEPWIDGLWAALTKHFTSLGGQEDMSGALPRASDAPSSTAVEPELLHIQSQVELLRLEDEGKGDSELREQNETNRSQLSRIEDFDSSLVHSVPPLSQTSLSIPAAPPEYLEVHLQECLDQEGNQASVPSVDPIFQVPILKAVQLTTNDAVKTTLLLELDISKIEFSHQPGDSFNVICPNSDSEVENLLQRLQLADKRAHRVNLRIKTDTKKKGAAVPQHVPEGSSLQFILTWCLEIRAVPKKAFLRALGDHTSSAPEKRRLQELCSKQGAADYNRFIRDANVCLLDLLHAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLRHPDKLHFVFNIIEFPSNTTAASLRKGVCTGWLATLVAPFLQPNSDVSDADSGDTLAPEIPISPRATNSFHLPDDPSAPIIMVGPGTGVAPFVGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFREDLRHFLKTGVLTHLKVSFSRDTVPEEEEAPAKYVQDNLQRHSQQVARILLQENGYIYVCGDAKNMAKDVNDALVEILSREAGADKLEAMKTLATLKQEKRYLQDIWS
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(6225051..6225179,6226714..6226867,6228472..6228589,6230652..6231024,6232335..6232457,6234658..6234811,6235929..6236017,6237074..6237254,6239565..6239607,6240282..6240468,6241461..6241579,6242041..6242133,6242234..6242416,6244661..6244805)
location: region:6225051-6244805:1
so has part: feature:6225051-6225179:1:exon
so has part: feature:6226714-6226867:1:exon
so has part: feature:6228472-6228589:1:exon
so has part: feature:6230652-6231024:1:exon
so has part: feature:6232335-6232457:1:exon
so has part: feature:6234658-6234811:1:exon
so has part: feature:6235929-6236017:1:exon
so has part: feature:6237074-6237254:1:exon
so has part: feature:6239565-6239607:1:exon
so has part: feature:6240282-6240468:1:exon
so has part: feature:6241461-6241579:1:exon
so has part: feature:6242041-6242133:1:exon
so has part: feature:6242234-6242416:1:exon
so has part: feature:6244661-6244805:1:exon

XP_034379513.1
type: Protein
SIO_000068: ncbiprotein

position:6225051:1
position: 6225051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6244805:1
position: 6244805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6225051-6225179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6226714-6226867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6228472-6228589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6230652-6231024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6232335-6232457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6234658-6234811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6235929-6236017:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6237074-6237254:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6239565-6239607:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6240282-6240468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6241461-6241579:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6242041-6242133:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6242234-6242416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6244661-6244805:1:exon

Mtrr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mtrr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methionine synthase reductase
translation: MRRFLLLYATQRGQAKAIAEEISEQAVSHGFSADLHCVSESEKYDLKTETGPLVMVVSTTGTGDPPDTARKFVKEIHNKTLPTDFFAHLRYGLLGLGDSEYTYFCNGGKVIDKRLQELGAQHFYDTGHADDCVGLELVVEPWIDGLWAALTKHFTSLGGQEDMSGALPRASDAPSSTAVEPELLHIQSQVELLRLEDEGKGDSELREQNETNRSQLSRIEDFDSSLVHSVPPLSQTSLSIPAAPPEYLEVHLQECLDQEGNQASVPSVDPIFQVPILKAVQLTTNDAVKTTLLLELDISKIEFSHQPGDSFNVICPNSDSEVENLLQRLQLADKRAHRVNLRIKTDTKKKGAAVPQHVPEGSSLQFILTWCLEIRAVPKKAFLRALGDHTSSAPEKRRLQELCSKQGAADYNRFIRDANVCLLDLLHAFPSCQPPLSLLLEHLPKLQPRPYSCASSSLRHPDKLHFVFNIIEFPSNTTAASLRKGVCTGWLATLVAPFLQPNSDVSDADSGDTLAPEIPISPRATNSFHLPDDPSAPIIMVGPGTGVAPFVGFLQHREKLQEQHPDGNFGAMWLFFGCRHKDRDYLFREDLRHFLKTGVLTHLKVSFSRDTVPEEEEAPAKYVQDNLQRHSQQVARILLQENGYIYVCGDAKNMAKDVNDALVEILSREAGADKLEAMKTLATLKQEKRYLQDIWS
SIO_010081: Mtrr
subclass of: SO_0000673
so part of: Mtrr
location: join(6225051..6225179,6226714..6226867,6228472..6228589,6230652..6231024,6232335..6232457,6234658..6234811,6235929..6236017,6237074..6237254,6239565..6239607,6240282..6240468,6241461..6241579,6242041..6242133,6242234..6242416,6244661..6244805)
location: region:6225051-6244805:1
so has part: feature:6225051-6225179:1:exon
so has part: feature:6226714-6226867:1:exon
so has part: feature:6228472-6228589:1:exon
so has part: feature:6230652-6231024:1:exon
so has part: feature:6232335-6232457:1:exon
so has part: feature:6234658-6234811:1:exon
so has part: feature:6235929-6236017:1:exon
so has part: feature:6237074-6237254:1:exon
so has part: feature:6239565-6239607:1:exon
so has part: feature:6240282-6240468:1:exon
so has part: feature:6241461-6241579:1:exon
so has part: feature:6242041-6242133:1:exon
so has part: feature:6242234-6242416:1:exon
so has part: feature:6244661-6244805:1:exon

XP_034379514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6225051-6225179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6226714-6226867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6228472-6228589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6230652-6231024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6232335-6232457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6234658-6234811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6235929-6236017:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6237074-6237254:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6239565-6239607:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6240282-6240468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6241461-6241579:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6242041-6242133:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6242234-6242416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6244661-6244805:1:exon

LOC117724058
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6247064..6247464)
location: region:6247064-6247464:-1
so has part: feature:6247064-6247464:-1:exon

117724058
type: Gene
SIO_000068: ncbigene

position:6247064:-1
position: 6247064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6247464:-1
position: 6247464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6247064-6247464:-1:exon

LOC117724058
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724058
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117724058
subclass of: SO_0000673
so part of: LOC117724058
location: complement(6247064..6247464)
location: region:6247064-6247464:-1
so has part: feature:6247064-6247464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6247064-6247464:-1:exon

LOC117724033
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6405677..6418101
location: region:6405677-6418101:1
so has part: feature:6405677-6418101:1:exon
subclass of: SO_0000010

117724033
type: Gene
SIO_000068: ncbigene

position:6405677:1
position: 6405677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6418101:1
position: 6418101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6405677-6418101:1:exon

LOC117724033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117724033
product: zinc finger protein 93-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 17 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034523664.1
SIO_010081: LOC117724033
subclass of: SO_0000673
so part of: LOC117724033
location: join(6405677..6405751,6413122..6413248,6413906..6414001,6416034..6418053)
location: region:6405677-6418053:1
so has part: feature:6405677-6405751:1:exon
so has part: feature:6413122-6413248:1:exon
so has part: feature:6413906-6414001:1:exon
so has part: feature:6416034-6418053:1:exon

position:6418053:1
position: 6418053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6405677-6405751:1:exon

position:6405751:1
position: 6405751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6413122-6413248:1:exon

position:6413122:1
position: 6413122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6413248:1
position: 6413248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6413906-6414001:1:exon

position:6413906:1
position: 6413906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6414001:1
position: 6414001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6416034-6418053:1:exon

position:6416034:1
position: 6416034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117724033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117724033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 93-like isoform X1
translation: MEDLLSFTDVAIDFSADECECLDSAQWNLYKDVMLENYSNLVFLGLAFSKPYLVTFLEQSSDPWSVKRKASAAVHLGSKAHKCKECGKSFDRNSVLIQHQRIHTGERPYRCEECGKSFNYSSSLKQHQRIHTGEKPYKCEVCGKAFNCSSYLGKHQRIHTGEKRYRCEECGKPFTNCSGLIVHRRVHTGEKPYKCEECGKAFSVRTTLSKHQRIHTGEKPYKCEECGKTFNVHSTLSKHQRIHTGEKPYKCEECGMAFNVRCILSKHQRTHTGEKPYKCKECGKAFNCSSSLHQHQQIHRGEKLYKCDDCGQAFSCSSYLYKHRRIHTGMKPYKCKECGKAFYCSVNLIYHQRVHTGEKPYKCDECGKAFSICSTFMKHQRIHSGEKPYKCKECEKAFNNCYNLIQHQRIHTGEKPYKCKDCGKAFNYTSSLAQHERIHTGEKPYKCEECGKAFNSSSNLKHHWRLHTGETPYKCEQCGKAFKNCSGFTRHCRIHTRENPD
SIO_010081: LOC117724033
subclass of: SO_0000673
so part of: LOC117724033
location: join(6405746..6405751,6413122..6413248,6413906..6414001,6416034..6417310)
location: region:6405746-6417310:1
so has part: feature:6405746-6405751:1:exon
so has part: feature:6413122-6413248:1:exon
so has part: feature:6413906-6414001:1:exon
so has part: feature:6416034-6417310:1:exon

XP_034379555.1
type: Protein
SIO_000068: ncbiprotein

position:6405746:1
position: 6405746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6417310:1
position: 6417310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6405746-6405751:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6413122-6413248:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6413906-6414001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6416034-6417310:1:exon

LOC117724033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117724033
product: zinc finger protein 93-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523665.1
SIO_010081: LOC117724033
subclass of: SO_0000673
so part of: LOC117724033
location: join(6411707..6411741,6413122..6413248,6413906..6414001,6416034..6418101)
location: region:6411707-6418101:1
so has part: feature:6411707-6411741:1:exon
so has part: feature:6413122-6413248:1:exon
so has part: feature:6413906-6414001:1:exon
so has part: feature:6416034-6418101:1:exon

position:6411707:1
position: 6411707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6411707-6411741:1:exon

position:6411741:1
position: 6411741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6413122-6413248:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6413906-6414001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6416034-6418101:1:exon

LOC117724033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117724033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 724-like isoform X2
translation: MLENYSNLVFLGLAFSKPYLVTFLEQSSDPWSVKRKASAAVHLGSKAHKCKECGKSFDRNSVLIQHQRIHTGERPYRCEECGKSFNYSSSLKQHQRIHTGEKPYKCEVCGKAFNCSSYLGKHQRIHTGEKRYRCEECGKPFTNCSGLIVHRRVHTGEKPYKCEECGKAFSVRTTLSKHQRIHTGEKPYKCEECGKTFNVHSTLSKHQRIHTGEKPYKCEECGMAFNVRCILSKHQRTHTGEKPYKCKECGKAFNCSSSLHQHQQIHRGEKLYKCDDCGQAFSCSSYLYKHRRIHTGMKPYKCKECGKAFYCSVNLIYHQRVHTGEKPYKCDECGKAFSICSTFMKHQRIHSGEKPYKCKECEKAFNNCYNLIQHQRIHTGEKPYKCKDCGKAFNYTSSLAQHERIHTGEKPYKCEECGKAFNSSSNLKHHWRLHTGETPYKCEQCGKAFKNCSGFTRHCRIHTRENPD
SIO_010081: LOC117724033
subclass of: SO_0000673
so part of: LOC117724033
location: join(6413215..6413248,6413906..6414001,6416034..6417310)
location: region:6413215-6417310:1
so has part: feature:6413215-6413248:1:exon
so has part: feature:6413906-6414001:1:exon
so has part: feature:6416034-6417310:1:exon

XP_034379556.1
type: Protein
SIO_000068: ncbiprotein

position:6413215:1
position: 6413215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6413215-6413248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6413906-6414001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6416034-6417310:1:exon

LOC117723657
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723657
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6462410..6472043
location: region:6462410-6472043:1
so has part: feature:6462410-6472043:1:exon

117723657
type: Gene
SIO_000068: ncbigene

position:6462410:1
position: 6462410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6472043:1
position: 6472043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6462410-6472043:1:exon

LOC117723657
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723657
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117723657
subclass of: SO_0000673
so part of: LOC117723657
location: 6462410..6462442
location: region:6462410-6462442:1
so has part: feature:6462410-6462442:1:exon

position:6462442:1
position: 6462442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6462410-6462442:1:exon

LOC117723657
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723657
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117723657
subclass of: SO_0000673
so part of: LOC117723657
location: 6467137..6467263
location: region:6467137-6467263:1
so has part: feature:6467137-6467263:1:exon

position:6467137:1
position: 6467137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6467263:1
position: 6467263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6467137-6467263:1:exon

LOC117723657
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723657
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117723657
subclass of: SO_0000673
so part of: LOC117723657
location: 6467737..6467832
location: region:6467737-6467832:1
so has part: feature:6467737-6467832:1:exon

position:6467737:1
position: 6467737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6467832:1
position: 6467832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6467737-6467832:1:exon

LOC117723657
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723657
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117723657
subclass of: SO_0000673
so part of: LOC117723657
location: 6469404..6472043
location: region:6469404-6472043:1
so has part: feature:6469404-6472043:1:exon

position:6469404:1
position: 6469404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6469404-6472043:1:exon

LOC117723752
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6497005..6508682
location: region:6497005-6508682:1
so has part: feature:6497005-6508682:1:exon
subclass of: SO_0000010

117723752
type: Gene
SIO_000068: ncbigene

position:6497005:1
position: 6497005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6508682:1
position: 6508682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6497005-6508682:1:exon

LOC117723752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723752
product: zinc finger protein 728-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 30 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523293.1
SIO_010081: LOC117723752
subclass of: SO_0000673
so part of: LOC117723752
location: join(6497005..6497115,6503667..6503793,6505082..6505177,6505873..6508682)
location: region:6497005-6508682:1
so has part: feature:6497005-6497115:1:exon
so has part: feature:6503667-6503793:1:exon
so has part: feature:6505082-6505177:1:exon
so has part: feature:6505873-6508682:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6497005-6497115:1:exon

position:6497115:1
position: 6497115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6503667-6503793:1:exon

position:6503667:1
position: 6503667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6503793:1
position: 6503793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6505082-6505177:1:exon

position:6505082:1
position: 6505082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6505177:1
position: 6505177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6505873-6508682:1:exon

position:6505873:1
position: 6505873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723752
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723752
product: zinc finger protein 728-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523294.1
SIO_010081: LOC117723752
subclass of: SO_0000673
so part of: LOC117723752
location: join(6497080..6497115,6503667..6503793,6505082..6505177,6505873..6507419,6507924..6508656)
location: region:6497080-6508656:1
so has part: feature:6497080-6497115:1:exon
so has part: feature:6503667-6503793:1:exon
so has part: feature:6505082-6505177:1:exon
so has part: feature:6505873-6507419:1:exon
so has part: feature:6507924-6508656:1:exon

position:6497080:1
position: 6497080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6508656:1
position: 6508656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6497080-6497115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6503667-6503793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6505082-6505177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6505873-6507419:1:exon

position:6507419:1
position: 6507419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6507924-6508656:1:exon

position:6507924:1
position: 6507924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 728-like isoform X1
translation: MEVGAGSSAIFQDMLSFRDVAIEFSAEEWECLGPTQWKLYKDVMLENYNNLVFLGLTFSKPYLVTFLEQIQEPSDVKKGVAASVHPGGKCCKCKECGKVFEWTKVFQNHQIIDLGGKPYKFEACVEHFHIPSLSSEETRIHTGEKSYECEICSKAFCIPLLLSEHKIIHTGENPYKCEVCGKAFQHPSRLSRHKKIHSEEKPYKCEVCGKAFHFPSLLLVHKRVHTGEKPYKCEVCGKAFHYPSILNKHKRIHTGEKPYKCEVCGKAFHISSFLSKHKIIHRGEKPYKCEVCGKAFHYPSRLSNHKKIHSGEKPFKCEVCGKAFRILSLLSKHKIIHTDENPYKCEVCGKAFDYPSRLSTHAKMHTGEKPYKCELCPKAFRSLSSLSKHKRIHTGDNYYNSEVCGKAFVYPSRLPKRKKVCAGEKPYKCEVCGKAFHVSSLLSKHRKVHTGEKLYKCEVCGKAFYYPSRLSNHKKIHTGEKPYKCVECGKAFCFPSSLSKHRRIHTGEKPYKCKECGKDFRSLSSLSKHKRIHTGEKPYKCEVCSKAFHYPSLLSKHRTIHTEEKPYKCEVCGQAFHVPSKLSHHKVIHSGEKPYKCEVCGKAFCISLLLSKHKIIHKGENHYNSHLCSKAFVYPSRLSKHKKIHTREKPYKCDVCGKAFRFPSLLLIHKGMHTGEKPYKCEDCGKAFYYPSLLTKHKRIHTGEKPYQCEVCGKSFHVSSSLSKHRIIHTGEKPYKCKVCGKTFRFSSSLSKHKRNHTGKKPYKCEECGKTFHFPSLLSKHKVSHSGEKPYNCDLCGKSFHYSSLLSKHKMIHTGEKPHKCEVCGKAFHYPSKLSNHKKIHTGEKPYKCEVCGNVFCFASSLSKHKRIHTGENPYKCEVCGKAFYYPSLLSKHKIIHTGEKPYKCEVCGKAFHYPSLLSKHKIIHTGKKPYKCEVCGKAFHYPSRLSKHKKIHGAGEMAQRLRELAVLSEVLNSIPSNHMVVYNHV
SIO_010081: LOC117723752
subclass of: SO_0000673
so part of: LOC117723752
location: join(6497080..6497115,6503667..6503793,6505082..6505177,6505873..6508574)
location: region:6497080-6508574:1
so has part: feature:6497080-6497115:1:exon
so has part: feature:6503667-6503793:1:exon
so has part: feature:6505082-6505177:1:exon
so has part: feature:6505873-6508574:1:exon

XP_034379184.1
type: Protein
SIO_000068: ncbiprotein

position:6508574:1
position: 6508574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6497080-6497115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6503667-6503793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6505082-6505177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6505873-6508574:1:exon

LOC117723752
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 728-like isoform X2
translation: MEVGAGSSAIFQDMLSFRDVAIEFSAEEWECLGPTQWKLYKDVMLENYNNLVFLGLTFSKPYLVTFLEQIQEPSDVKKGVAASVHPGGKCCKCKECGKVFEWTKVFQNHQIIDLGGKPYKFEACVEHFHIPSLSSEETRIHTGEKSYECEICSKAFCIPLLLSEHKIIHTGENPYKCEVCGKAFQHPSRLSRHKKIHSEEKPYKCEVCGKAFHFPSLLLVHKRVHTGEKPYKCEVCGKAFHYPSILNKHKRIHTGEKPYKCEVCGKAFHISSFLSKHKIIHRGEKPYKCEVCGKAFHYPSRLSNHKKIHSGEKPFKCEVCGKAFRILSLLSKHKIIHTDENPYKCEVCGKAFDYPSRLSTHAKMHTGEKPYKCELCPKAFRSLSSLSKHKRIHTGDNYYNSEVCGKAFVYPSRLPKRKKVCAGEKPYKCEVCGKAFHVSSLLSKHRKVHTGEKLYKCEVCGKAFYYPSRLSNHKKIHTGEKPYKCVECGKAFCFPSSLSKHRRIHTGEKPYKCKECGKDFRSLSSLSKHKRIHTGEKPYKCEVCSKAFHYPSLLSKHRTIHTEEKPYKCEVCGQAFHVPSKLSHHKVIHSGEKPYKCEVCGKTFHFPSLLSKHKVSHSGEKPYNCDLCGKSFHYSSLLSKHKMIHTGEKPHKCEVCGKAFHYPSKLSNHKKIHTGEKPYKCEVCGNVFCFASSLSKHKRIHTGENPYKCEVCGKAFYYPSLLSKHKIIHTGEKPYKCEVCGKAFHYPSLLSKHKIIHTGKKPYKCEVCGKAFHYPSRLSKHKKIHGAGEMAQRLRELAVLSEVLNSIPSNHMVVYNHV
SIO_010081: LOC117723752
subclass of: SO_0000673
so part of: LOC117723752
location: join(6497080..6497115,6503667..6503793,6505082..6505177,6505873..6507419,6507924..6508574)
location: region:6497080-6508574:1
so has part: feature:6497080-6497115:1:exon
so has part: feature:6503667-6503793:1:exon
so has part: feature:6505082-6505177:1:exon
so has part: feature:6505873-6507419:1:exon
so has part: feature:6507924-6508574:1:exon

XP_034379185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6497080-6497115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6503667-6503793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6505082-6505177:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6505873-6507419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6507924-6508574:1:exon

LOC117724036
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117724036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6546070..6561860
location: region:6546070-6561860:1
so has part: feature:6546070-6561860:1:exon

117724036
type: Gene
SIO_000068: ncbigene

position:6546070:1
position: 6546070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6561860:1
position: 6561860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6546070-6561860:1:exon

LOC117724036
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117724036
subclass of: SO_0000673
so part of: LOC117724036
location: 6546070..6546101
location: region:6546070-6546101:1
so has part: feature:6546070-6546101:1:exon

position:6546101:1
position: 6546101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6546070-6546101:1:exon

LOC117724036
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117724036
subclass of: SO_0000673
so part of: LOC117724036
location: 6555968..6556094
location: region:6555968-6556094:1
so has part: feature:6555968-6556094:1:exon

position:6555968:1
position: 6555968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6556094:1
position: 6556094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6555968-6556094:1:exon

LOC117724036
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117724036
subclass of: SO_0000673
so part of: LOC117724036
location: 6557393..6557488
location: region:6557393-6557488:1
so has part: feature:6557393-6557488:1:exon

position:6557393:1
position: 6557393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6557488:1
position: 6557488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6557393-6557488:1:exon

LOC117724036
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117724036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117724036
subclass of: SO_0000673
so part of: LOC117724036
location: 6558851..6561860
location: region:6558851-6561860:1
so has part: feature:6558851-6561860:1:exon

position:6558851:1
position: 6558851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6558851-6561860:1:exon

LOC117723831
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6605505..6612427
location: region:6605505-6612427:1
so has part: feature:6605505-6612427:1:exon
subclass of: SO_0000010

117723831
type: Gene
SIO_000068: ncbigene

position:6605505:1
position: 6605505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6612427:1
position: 6612427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6605505-6612427:1:exon

LOC117723831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723831
product: zinc finger protein 493-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 19 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034523387.1
SIO_010081: LOC117723831
subclass of: SO_0000673
so part of: LOC117723831
location: join(6605505..6605628,6606521..6606616,6608210..6612427)
location: region:6605505-6612427:1
so has part: feature:6605505-6605628:1:exon
so has part: feature:6606521-6606616:1:exon
so has part: feature:6608210-6612427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6605505-6605628:1:exon

position:6605628:1
position: 6605628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6606521-6606616:1:exon

position:6606521:1
position: 6606521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6606616:1
position: 6606616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6608210-6612427:1:exon

position:6608210:1
position: 6608210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 493-like
translation: MLSFWDVAVDFSPEERECLEPAQWNLYRDVILENYSHLVFLGLAFSKPYLVTFLEQGQEPSDEKRPVATTMHPDIKPYKCKECGKACDWNSLLLEHQRTDPGEDAYKCEECGKTSGSYSVLSEHHIIDTEEKACKCEECGKVICTCSGNSSYQRICIGENPYKCEECGKAFSTYSCLAQHEIEHTGQKFYNCEECGKLFYYPSHLTEHQKIHSQENLFKIEVCSEVFCAPIELSRDQNFCTEEKPYKYEEYVKAFSACSILSEHPRIHPGEKAFKCEECGSPFCTLHSVSKMKIHCEVKSYKCEECGKAFASHLSLIQHKIGHTREKPYQCEECGKMFYCSSNLKQHQITHSQEKPYKCEVCGKVFRTCWQLSKHLRIHSGEKPYKCEECGKAFYTLSYLTQHKLGHTGEKPYKCEECGKTFYYPSVLKEHLAIHSGEKPYRCDECGKDFCTRSGRSRHQRIHTGEKPYKCEQCGKAFSTHSYLSHHKIVHTGHKPYKCEECGKKFYYPSRLKEHQRIHSQENPYKCDICGKAFYTHSYFIQHKLGHTGEKPYKCEECGKTFYYPSILKEHLAIHSGKKPYRCDECGKDFCTRSGRSRHQRIHTGEKPHKCEECGKVFSTHSYLTQHKVVHSGEKPYKCEECGKKFYYPSRLKEHQRIHSQENPYKCDICGNVFCTPKGLAKHQRFHTGEKPYKCEECGKMFYYPSRLKEHQRIHSQENPYKCDICGKAFYTHSYLTQHKLGHTGEKPYKCEECGKTFYYPSILKEHLAIHSGKKPYRCDECGKDFCTRSGRSRHQRIHTGEKPYKCEQCGKVFSTHSYLSQHKIVHSGEKPYKCEECGKMFYYPSRLKEHQRIHSQENPYKCEVCGKAFSAHLELAAHLSIHSG
SIO_010081: LOC117723831
subclass of: SO_0000673
so part of: LOC117723831
location: join(6605505..6605628,6606521..6606616,6608210..6610647)
location: region:6605505-6610647:1
so has part: feature:6605505-6605628:1:exon
so has part: feature:6606521-6606616:1:exon
so has part: feature:6608210-6610647:1:exon

XP_034379278.1
type: Protein
SIO_000068: ncbiprotein

position:6610647:1
position: 6610647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6605505-6605628:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6606521-6606616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6608210-6610647:1:exon

LOC117723832
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6626221..6654721
location: region:6626221-6654721:1
so has part: feature:6626221-6654721:1:exon
subclass of: SO_0000010

117723832
type: Gene
SIO_000068: ncbigene

position:6626221:1
position: 6626221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6654721:1
position: 6654721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6626221-6654721:1:exon

LOC117723832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723832
product: zinc finger protein 420-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 1 long SRA read, 18 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034523388.1
SIO_010081: LOC117723832
subclass of: SO_0000673
so part of: LOC117723832
location: join(6626221..6626375,6631712..6631838,6632302..6632397,6634449..6636854)
location: region:6626221-6636854:1
so has part: feature:6626221-6626375:1:exon
so has part: feature:6631712-6631838:1:exon
so has part: feature:6632302-6632397:1:exon
so has part: feature:6634449-6636854:1:exon

position:6636854:1
position: 6636854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6626221-6626375:1:exon

position:6626375:1
position: 6626375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6631712-6631838:1:exon

position:6631712:1
position: 6631712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6631838:1
position: 6631838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6632302-6632397:1:exon

position:6632302:1
position: 6632302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6632397:1
position: 6632397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6634449-6636854:1:exon

position:6634449:1
position: 6634449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723832
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723832
product: zinc finger protein 420-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523389.1
SIO_010081: LOC117723832
subclass of: SO_0000673
so part of: LOC117723832
location: join(6626301..6626375,6631712..6631838,6632302..6632397,6634449..6635890,6654681..6654721)
location: region:6626301-6654721:1
so has part: feature:6626301-6626375:1:exon
so has part: feature:6631712-6631838:1:exon
so has part: feature:6632302-6632397:1:exon
so has part: feature:6634449-6635890:1:exon
so has part: feature:6654681-6654721:1:exon

position:6626301:1
position: 6626301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6626301-6626375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6631712-6631838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6632302-6632397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6634449-6635890:1:exon

position:6635890:1
position: 6635890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6654681-6654721:1:exon

position:6654681:1
position: 6654681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 420-like
translation: MEEMLSFRDVAIDFSAEEWECLDLAQWNLYRDVMLENYSNLVFLGLASCKPYLVTFLEQRQELSDVKRPAAATMHPGGKPYKCQEFDKAFDWNSLLIQHQRIHPVGKPYKCEECGKVFSAHSALSIHQRIHTGEKPYKCEECGKAFSTRSALYIHKKIHSGDKPYKCEECAKAFYFPSLLKQHQRTHSAENLCKCEECGKAFYLPSFLKQHQRIHSAENPYRCEECGKAFSYPSTLKQHQRIHSGEKPYRCEECGKAFRRSTYFHQHQRIHTGEKPYQCEECGKTFYYRSNLKGHQIIHSGVKPYKCDVCGSMFRTSSDLSKHQRIHAEVKMYSCEECGKAFSTHSYLIRHKLGHSREKPYKCEECGKTFCYPSILKEHQRIHSGVKPYSCDVCGSMFRTRSELSKHQRIHAEVKLYNCEECGKAFSTHSYLMRHRLGHSGEKPYKCEECGKSYSYPSLLKEHQRIHSQNPYKCDVCGKVFCTRSGRSKHQRIHTGEKPYKCEECGKGFSTHSYLTLHKLLHTGEKPFKWEECGEVFYTC
SIO_010081: LOC117723832
subclass of: SO_0000673
so part of: LOC117723832
location: join(6626370..6626375,6631712..6631838,6632302..6632397,6634449..6635842)
location: region:6626370-6635842:1
so has part: feature:6626370-6626375:1:exon
so has part: feature:6631712-6631838:1:exon
so has part: feature:6632302-6632397:1:exon
so has part: feature:6634449-6635842:1:exon

XP_034379279.1
type: Protein
SIO_000068: ncbiprotein

position:6626370:1
position: 6626370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6635842:1
position: 6635842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6626370-6626375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6631712-6631838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6632302-6632397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6634449-6635842:1:exon

LOC117723832
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723832
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 420-like
translation: MEEMLSFRDVAIDFSAEEWECLDLAQWNLYRDVMLENYSNLVFLGLASCKPYLVTFLEQRQELSDVKRPAAATMHPGGKPYKCQEFDKAFDWNSLLIQHQRIHPVGKPYKCEECGKVFSAHSALSIHQRIHTGEKPYKCEECGKAFSTRSALYIHKKIHSGDKPYKCEECAKAFYFPSLLKQHQRTHSAENLCKCEECGKAFYLPSFLKQHQRIHSAENPYRCEECGKAFSYPSTLKQHQRIHSGEKPYRCEECGKAFRRSTYFHQHQRIHTGEKPYQCEECGKTFYYRSNLKGHQIIHSGVKPYKCDVCGSMFRTSSDLSKHQRIHAEVKMYSCEECGKAFSTHSYLIRHKLGHSREKPYKCEECGKTFCYPSILKEHQRIHSGVKPYSCDVCGSMFRTRSELSKHQRIHAEVKLYNCEECGKAFSTHSYLMRHRLGHSGEKPYKCEECGKSYSYPSLLKEHQRIHSQNPYKCDVCGKVFCTRSGRSKHQRIHTGEKPYKCEECGKGFSTHSYLTLHKLLHTGEKPFKWEECGEVFYTC
SIO_010081: LOC117723832
subclass of: SO_0000673
so part of: LOC117723832
location: join(6626370..6626375,6631712..6631838,6632302..6632397,6634449..6635842)
location: region:6626370-6635842:1
so has part: feature:6626370-6626375:1:exon
so has part: feature:6631712-6631838:1:exon
so has part: feature:6632302-6632397:1:exon
so has part: feature:6634449-6635842:1:exon

XP_034379280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6626370-6626375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6631712-6631838:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6632302-6632397:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6634449-6635842:1:exon

LOC117723704
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6657154..6688890
location: region:6657154-6688890:1
so has part: feature:6657154-6688890:1:exon
subclass of: SO_0000010

117723704
type: Gene
SIO_000068: ncbigene

position:6657154:1
position: 6657154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6688890:1
position: 6688890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6657154-6688890:1:exon

LOC117723704
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723704
product: zinc finger protein 420-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523251.1
SIO_010081: LOC117723704
subclass of: SO_0000673
so part of: LOC117723704
location: join(6657154..6657225,6663295..6663421,6663905..6664000,6665657..6666817,6666969..6667099,6668745..6668883,6669815..6669939,6676703..6676951,6679190..6679316,6679765..6679860,6685673..6688890)
location: region:6657154-6688890:1
so has part: feature:6657154-6657225:1:exon
so has part: feature:6663295-6663421:1:exon
so has part: feature:6663905-6664000:1:exon
so has part: feature:6665657-6666817:1:exon
so has part: feature:6666969-6667099:1:exon
so has part: feature:6668745-6668883:1:exon
so has part: feature:6669815-6669939:1:exon
so has part: feature:6676703-6676951:1:exon
so has part: feature:6679190-6679316:1:exon
so has part: feature:6679765-6679860:1:exon
so has part: feature:6685673-6688890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6657154-6657225:1:exon

position:6657225:1
position: 6657225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6663295-6663421:1:exon

position:6663295:1
position: 6663295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6663421:1
position: 6663421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6663905-6664000:1:exon

position:6663905:1
position: 6663905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6664000:1
position: 6664000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6665657-6666817:1:exon

position:6665657:1
position: 6665657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6666817:1
position: 6666817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6666969-6667099:1:exon

position:6666969:1
position: 6666969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6667099:1
position: 6667099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6668745-6668883:1:exon

position:6668745:1
position: 6668745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6668883:1
position: 6668883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6669815-6669939:1:exon

position:6669815:1
position: 6669815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6669939:1
position: 6669939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6676703-6676951:1:exon

position:6676703:1
position: 6676703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6676951:1
position: 6676951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6679190-6679316:1:exon

position:6679190:1
position: 6679190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6679316:1
position: 6679316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6679765-6679860:1:exon

position:6679765:1
position: 6679765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6679860:1
position: 6679860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6685673-6688890:1:exon

position:6685673:1
position: 6685673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723704
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 420-like
translation: MEEMLSFWDVAIDFSAEERECLEPAQWNLYRDVILENYSHLVFLGLSLSKPFLVTFLEQRQGPWDVKRPTAATVYPGKTLSKCKDFSKAFYCNSLLIQHQRTRTGENPFKCEECGKAFRIRSRLSIHQRIHTGEKPYKCKECGKAFNTHSNLSEHQRIHTGEKPYKCEECGKAFSTRSTHYRHQKNHTGEKPYKCKECAKVFSYPSLLKVHQRIHSAEKSYKCEECGKLFYCPLLLKKHQIIHSTEKPYKCADCGKAFHYPSLLKRHQRIHGGKKPCKCRDCDRVFYSSALFKRHQRIHSEENSYKCGECGKRFYSFPHLQDHQRLHSGEKPYKCEQCGKAFSTLSYLPWHKLRHSGEKSYKCEKCGKLFYSTLDLKKHQKIHEYKCRECHYCFPNYSALTAHQRIHTGEKPYVCEQCGKAFSRLDSLNQHQTVHTGEKPYKCEKCGKCFFRSSSLKRHQGIHLTLIVQRNLLNSEERDRLLVFLHILNNNDLHPGHGCYYVKDVVKVMDLEWLGRQVVYLDLYENSKAGEGPSAKRNEQEKANERPKDRREQGKRQDVKKNDEKLFLTRESTLARHDPVKEKWEEEVESWNVGQVTLHSDRLQGRNPGPLRSTTPSPWTPVIPSHRLVGNVVCNAVTSQFGTLVNKSSAFGKHVRLLSKAGPDSGPVRLSRWISDMEEMLSFRDVAINFSPEERECLEPAQWNLYRDVMLENYSNLVFLGLAVSKPYLVTFLEQNQESSGVKRQASASSPPGTTGNEFNNHSEPIDHISLMQCQRIHTEEEPYYFEECGKALSSQATLSIRQRRYIGDKPYKCKECHKALSSRSSLLIHQKYHTDEKTYKCEKCGKHFLRSSHLQHHQKIHTGEKPYKCEECHKAFLHHSYLRKHQAVHTGEKPYKCEECGNSFYYPAMLKQHQRIHSGEKPDKCEECGKVFSSAFFLNQHKGIDSEEKRYKCEECGKSFCYRSYLREHYRRHSGEYPYKCEECGKGFSRSSKLQEHQTIHTGVKPYNCEECGKCFSSFTSLKRHQIIHSEDTPHECVECGKRFSSSSRLQEHQKIHTEEKPYKCEECHKAFLYHSFLRRHQAVHTREKPYKCEECGKCYTSFTSLKRHQTIHSRHSP
SIO_010081: LOC117723704
subclass of: SO_0000673
so part of: LOC117723704
location: join(6657220..6657225,6663295..6663421,6663905..6664000,6665657..6666817,6666969..6667099,6668745..6668883,6669815..6669939,6676703..6676951,6679190..6679316,6679765..6679860,6685673..6686775)
location: region:6657220-6686775:1
so has part: feature:6657220-6657225:1:exon
so has part: feature:6663295-6663421:1:exon
so has part: feature:6663905-6664000:1:exon
so has part: feature:6665657-6666817:1:exon
so has part: feature:6666969-6667099:1:exon
so has part: feature:6668745-6668883:1:exon
so has part: feature:6669815-6669939:1:exon
so has part: feature:6676703-6676951:1:exon
so has part: feature:6679190-6679316:1:exon
so has part: feature:6679765-6679860:1:exon
so has part: feature:6685673-6686775:1:exon

XP_034379142.1
type: Protein
SIO_000068: ncbiprotein

position:6657220:1
position: 6657220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6686775:1
position: 6686775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6657220-6657225:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6663295-6663421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6663905-6664000:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6665657-6666817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6666969-6667099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6668745-6668883:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6669815-6669939:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6676703-6676951:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6679190-6679316:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6679765-6679860:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6685673-6686775:1:exon

LOC117723898
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6697444..6706527
location: region:6697444-6706527:1
so has part: feature:6697444-6706527:1:exon
subclass of: SO_0000010

117723898
type: Gene
SIO_000068: ncbigene

position:6697444:1
position: 6697444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6706527:1
position: 6706527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6697444-6706527:1:exon

LOC117723898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723898
product: zinc finger protein 58-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034523480.1
SIO_010081: LOC117723898
subclass of: SO_0000673
so part of: LOC117723898
location: join(6697444..6697522,6699334..6699460,6699914..6700009,6703349..6706527)
location: region:6697444-6706527:1
so has part: feature:6697444-6697522:1:exon
so has part: feature:6699334-6699460:1:exon
so has part: feature:6699914-6700009:1:exon
so has part: feature:6703349-6706527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6697444-6697522:1:exon

position:6697522:1
position: 6697522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6699334-6699460:1:exon

position:6699334:1
position: 6699334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6699460:1
position: 6699460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6699914-6700009:1:exon

position:6699914:1
position: 6699914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6700009:1
position: 6700009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6703349-6706527:1:exon

position:6703349:1
position: 6703349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X1
translation: MEEMLSFWDVAIDFSPEERECLEPAQWNLYRDVILENYSNLVFLGLAVAKPYLVTFLEQNQGSSGVKRQASASSPPGTTGNEFNNHSEPIDHTSLMQCQRIHTEEEPYYFEECGKALSSQATLSIRQRRYIGDKPYKCKECHKTLSSRSSLLIHQKYHTDEKNYKCEKCGKGFFRSSDLQHHQKIHTGEKPYKCEECHKAFLHHSYLRKHQAVHTGEKPYKCEECGNSFYYPAMLKQHQRIHSGEKPDKCEECGKVFSSAFFLNQHKGIDSEEKRYKCEECGKSFCYRSYLREHYRRHSGEYPYKCEECGKGFSRSSKLQEHQTIHTGVKPYNCEECGKCFSSFTSLKRHQIIHSEDTPHECVECGKRFSSSSRLQEHQKIHTEEKPYKCEECHKAFLYHSFLRRHQAVHTREKPYKCEECGKCFSSFTSLKRHQIHSVDTSHECV
SIO_010081: LOC117723898
subclass of: SO_0000673
so part of: LOC117723898
location: join(6697517..6697522,6699334..6699460,6699914..6700009,6703349..6704460)
location: region:6697517-6704460:1
so has part: feature:6697517-6697522:1:exon
so has part: feature:6699334-6699460:1:exon
so has part: feature:6699914-6700009:1:exon
so has part: feature:6703349-6704460:1:exon

XP_034379371.1
type: Protein
SIO_000068: ncbiprotein

position:6697517:1
position: 6697517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6704460:1
position: 6704460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6697517-6697522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6699334-6699460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6699914-6700009:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6703349-6704460:1:exon

LOC117723898
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723898
product: zinc finger protein 58-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523481.1
SIO_010081: LOC117723898
subclass of: SO_0000673
so part of: LOC117723898
location: join(6697887..6697972,6699334..6699460,6699914..6700009,6703349..6706527)
location: region:6697887-6706527:1
so has part: feature:6697887-6697972:1:exon
so has part: feature:6699334-6699460:1:exon
so has part: feature:6699914-6700009:1:exon
so has part: feature:6703349-6706527:1:exon

position:6697887:1
position: 6697887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6697887-6697972:1:exon

position:6697972:1
position: 6697972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6699334-6699460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6699914-6700009:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6703349-6706527:1:exon

LOC117723898
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like isoform X2
translation: MLSFWDVAIDFSPEERECLEPAQWNLYRDVILENYSNLVFLGLAVAKPYLVTFLEQNQGSSGVKRQASASSPPGTTGNEFNNHSEPIDHTSLMQCQRIHTEEEPYYFEECGKALSSQATLSIRQRRYIGDKPYKCKECHKTLSSRSSLLIHQKYHTDEKNYKCEKCGKGFFRSSDLQHHQKIHTGEKPYKCEECHKAFLHHSYLRKHQAVHTGEKPYKCEECGNSFYYPAMLKQHQRIHSGEKPDKCEECGKVFSSAFFLNQHKGIDSEEKRYKCEECGKSFCYRSYLREHYRRHSGEYPYKCEECGKGFSRSSKLQEHQTIHTGVKPYNCEECGKCFSSFTSLKRHQIIHSEDTPHECVECGKRFSSSSRLQEHQKIHTEEKPYKCEECHKAFLYHSFLRRHQAVHTREKPYKCEECGKCFSSFTSLKRHQIHSVDTSHECV
SIO_010081: LOC117723898
subclass of: SO_0000673
so part of: LOC117723898
location: join(6699337..6699460,6699914..6700009,6703349..6704460)
location: region:6699337-6704460:1
so has part: feature:6699337-6699460:1:exon
so has part: feature:6699914-6700009:1:exon
so has part: feature:6703349-6704460:1:exon

XP_034379372.1
type: Protein
SIO_000068: ncbiprotein

position:6699337:1
position: 6699337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6699337-6699460:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6699914-6700009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6703349-6704460:1:exon

LOC117723905
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6712670..6733333
location: region:6712670-6733333:1
so has part: feature:6712670-6733333:1:exon

117723905
type: Gene
SIO_000068: ncbigene

position:6712670:1
position: 6712670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6733333:1
position: 6733333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6712670-6733333:1:exon

LOC117723905
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117723905
subclass of: SO_0000673
so part of: LOC117723905
location: 6712670..6712753
location: region:6712670-6712753:1
so has part: feature:6712670-6712753:1:exon

position:6712753:1
position: 6712753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6712670-6712753:1:exon

LOC117723905
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117723905
subclass of: SO_0000673
so part of: LOC117723905
location: 6723952..6724177
location: region:6723952-6724177:1
so has part: feature:6723952-6724177:1:exon

position:6723952:1
position: 6723952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6724177:1
position: 6724177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6723952-6724177:1:exon

LOC117723905
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117723905
subclass of: SO_0000673
so part of: LOC117723905
location: 6727418..6727556
location: region:6727418-6727556:1
so has part: feature:6727418-6727556:1:exon

position:6727418:1
position: 6727418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6727556:1
position: 6727556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6727418-6727556:1:exon

LOC117723905
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117723905
subclass of: SO_0000673
so part of: LOC117723905
location: 6728021..6728116
location: region:6728021-6728116:1
so has part: feature:6728021-6728116:1:exon

position:6728021:1
position: 6728021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6728116:1
position: 6728116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6728021-6728116:1:exon

LOC117723905
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117723905
subclass of: SO_0000673
so part of: LOC117723905
location: 6732523..6733333
location: region:6732523-6733333:1
so has part: feature:6732523-6733333:1:exon

position:6732523:1
position: 6732523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6732523-6733333:1:exon

LOC117723897
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6747237..6757770
location: region:6747237-6757770:1
so has part: feature:6747237-6757770:1:exon
subclass of: SO_0000010

117723897
type: Gene
SIO_000068: ncbigene

position:6747237:1
position: 6747237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6757770:1
position: 6757770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6747237-6757770:1:exon

LOC117723897
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723897
product: zinc finger protein 58-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523478.1
SIO_010081: LOC117723897
subclass of: SO_0000673
so part of: LOC117723897
location: join(6747237..6747360,6747848..6747943,6756333..6757770)
location: region:6747237-6757770:1
so has part: feature:6747237-6747360:1:exon
so has part: feature:6747848-6747943:1:exon
so has part: feature:6756333-6757770:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6747237-6747360:1:exon

position:6747360:1
position: 6747360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6747848-6747943:1:exon

position:6747848:1
position: 6747848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6747943:1
position: 6747943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6756333-6757770:1:exon

position:6756333:1
position: 6756333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723897
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723897
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 58-like
translation: MLSFWDVAIDFSPEEWECLEPAQWNLYRDVMLENYSNLAFLGLALSKPFLVMFLELRQGPCDVKSPAAATVYPGITPNDPNNYSKNTDHKSLLIKQQRIRIGEKLYKCGECGKALSSHKALSIHQRLHTGDKPYECEVCRKAFSTRSSRFIHMKNHADEKPYKCEDCGKSFYYPSMLKQHQRNHSREKPYKCKECGKSFRFSSILKHHLRIHTRENPSRYEDCNKRFSFSLHLHKQEQIYTGEKPYKCGECESCFSSSSSLRRHQTFHSQDNPYKCEECGKRFSYYGSLQEHQRIHTGEKPYKCENCHKAFRYRSSLRRHKTVHTGKKLYKCEECGRCYLSSFNLRRHQVIHSEDNPHKCVECGKAFVDAYNLTQHMLVHTRKISYKCEECGRCFFSPFKLRRHQVIHSEDNPHKCVECGKAFVDAYNLTQHMTVHTGEKSYKCEKCHKAFRYRSSLRRHKTVHTGEKLYKCEECGRCFSSSSYFRRHQVIHSEDNPHKCVECGKAFDNGYRLTRHMTVHTGEKSYKVF
SIO_010081: LOC117723897
subclass of: SO_0000673
so part of: LOC117723897
location: join(6747237..6747360,6747848..6747943,6756333..6757702)
location: region:6747237-6757702:1
so has part: feature:6747237-6747360:1:exon
so has part: feature:6747848-6747943:1:exon
so has part: feature:6756333-6757702:1:exon

XP_034379369.1
type: Protein
SIO_000068: ncbiprotein

position:6757702:1
position: 6757702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6747237-6747360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6747848-6747943:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6756333-6757702:1:exon

LOC117723900
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6768175..6779091
location: region:6768175-6779091:1
so has part: feature:6768175-6779091:1:exon
subclass of: SO_0000010