Arvicanthis niloticus isolate mArvNil1 chromosome 18, mArvNil1.pat.X, whole genome shotgun sequence.
type: Entry
definition: Arvicanthis niloticus isolate mArvNil1 chromosome 18, mArvNil1.pat.X, whole genome shotgun sequence.
sequence version: NC_047675.1
sequence date: 2020-05-16
sequence: sequence
division: CON
label: NC_047675.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA632612
dblink: SAMN12611849
keyword: WGS
keyword: RefSeq
source: Arvicanthis niloticus (African grass rat)
organism: Arvicanthis niloticus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022268.1.\nAssembly name: mArvNil1.pat.X\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/27. The original whole-genome shotgun project has the\naccession JAAOMG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JAN-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Freebayes v. 1.3.1;\n gEVAL manual curation v. 2020-01-16; VGP\n trio assembly pipeline v. 1.6\nAssembly Name :: mArvNil1.pat.X\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.95x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Arvicanthis niloticus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 54839141
topology: linear
so has quality: SO_0000987
location: 1..54839141
location: region:1-54839141:1
RO_0002162: 61156

NC_047675
type: RefSeq
SIO_000068: refseq

PRJNA632612
type: BioProject
SIO_000068: bioproject

SAMN12611849
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54839141:1
position: 54839141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-54839141:1:source
so part of: sequence
organism: Arvicanthis niloticus
mol type: genomic DNA
isolate: mArvNil1
specimen voucher: T564M
chromosome: 18
sex: male
tissue type: Spleen (genome), brain & testis (transcriptome)
dev stage: adult
country: USA: Santa Barbara
lat lon: 34.41938 N 119.69905 W
collection date: 06-Mar-2019
collected by: Huishi Toh

61156
type: Taxonomy
SIO_000068: taxonomy

LOC117723434
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(278482..461409)
location: region:278482-461409:-1
so has part: feature:278482-461409:-1:exon
subclass of: SO_0000010

117723434
type: Gene
SIO_000068: ncbigene

position:278482:-1
position: 278482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461409:-1
position: 461409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278482-461409:-1:exon

LOC117723434
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723434
product: Y-box-binding protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523053.1
SIO_010081: LOC117723434
subclass of: SO_0000673
so part of: LOC117723434
location: complement(join(278482..278590,456711..456817,460786..461409))
location: region:278482-461409:-1
so has part: feature:460786-461409:-1:exon
so has part: feature:456711-456817:-1:exon
so has part: feature:278482-278590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460786-461409:-1:exon

position:460786:-1
position: 460786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:456711-456817:-1:exon

position:456711:-1
position: 456711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456817:-1
position: 456817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278482-278590:-1:exon

position:278590:-1
position: 278590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117723434
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y-box-binding protein 3-like
translation: MSEAGEATTCDTTLPQAADPAPKSPAASGTPQAPAPAAPLAGSPGRDAAPRPAPASSAPVGSEDSEKKVLATKVFGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGEGEIVEFDVVTGKGGPKATNVTGPDGVPVEGSHYAVRRRPPHNAGEIRQMKDGVLKGTQLLVHQNPTYRPRFHRGPAHPCTSPYRSLQVHIFVVNSKENVSVVDNMENVIVLKNGEDIFVEHTKGEEDIFVVDIEEDIAVVGSGEDFPVVDIAKDFLRVE
SIO_010081: LOC117723434
subclass of: SO_0000673
so part of: LOC117723434
location: complement(join(278482..278590,456711..456817,460786..461409))
location: region:278482-461409:-1
so has part: feature:460786-461409:-1:exon
so has part: feature:456711-456817:-1:exon
so has part: feature:278482-278590:-1:exon

XP_034378944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460786-461409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:456711-456817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278482-278590:-1:exon

LOC117723435
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 806246..807514
location: region:806246-807514:1
so has part: feature:806246-807514:1:exon
subclass of: SO_0000010

117723435
type: Gene
SIO_000068: ncbigene

position:806246:1
position: 806246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807514:1
position: 807514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806246-807514:1:exon

LOC117723435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723435
product: Y-box-binding protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
transcript id: XM_034523054.1
SIO_010081: LOC117723435
subclass of: SO_0000673
so part of: LOC117723435
location: join(806246..806869,807488..807514)
location: region:806246-807514:1
so has part: feature:806246-806869:1:exon
so has part: feature:807488-807514:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806246-806869:1:exon

position:806869:1
position: 806869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:807488-807514:1:exon

position:807488:1
position: 807488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y-box-binding protein 3-like
translation: MSEAGEATTCDTTLPQATDPAPKSPAASGMPQAPALAAPLAGSPGRDAAPGPAPASSAPVGSEDSEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGEGEIVEFDVVTGKGGPKATNVTGPDGVPVEGSHYAVCCRPPHNAGEIRQMKDGVPKGTQLLVHRNPTYRLRFRRGPAHPRTSPYCSLQVNKAPPHCF
SIO_010081: LOC117723435
subclass of: SO_0000673
so part of: LOC117723435
location: join(806246..806869,807488..807514)
location: region:806246-807514:1
so has part: feature:806246-806869:1:exon
so has part: feature:807488-807514:1:exon

XP_034378945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:806246-806869:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:807488-807514:1:exon

LOC117723436
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1225256..1229443
location: region:1225256-1229443:1
so has part: feature:1225256-1229443:1:exon
subclass of: SO_0000010

117723436
type: Gene
SIO_000068: ncbigene

position:1225256:1
position: 1225256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229443:1
position: 1229443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225256-1229443:1:exon

LOC117723436
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723436
product: Y-box-binding protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523055.1
SIO_010081: LOC117723436
subclass of: SO_0000673
so part of: LOC117723436
location: join(1225256..1225879,1229426..1229443)
location: region:1225256-1229443:1
so has part: feature:1225256-1225879:1:exon
so has part: feature:1229426-1229443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225256-1225879:1:exon

position:1225879:1
position: 1225879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1229426-1229443:1:exon

position:1229426:1
position: 1229426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117723436
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y-box-binding protein 3-like
translation: MSKADKATTCGTMLPQAADSAPKSPAASGMPQAPAPAVSLAGEPRQRRRPGPALASSAPVDSKDPEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFIHQTAIKKNNPRKYLRSVGEGEIVEFDVVVGKGGPKATNVTGPDGVPVEGSCYAVRCRPPHNAGEIRQMKDGVPKRTQLLVHRNPTYHPRFCRRPAHPRTSPYRSLQVVSTGY
SIO_010081: LOC117723436
subclass of: SO_0000673
so part of: LOC117723436
location: join(1225256..1225879,1229426..1229443)
location: region:1225256-1229443:1
so has part: feature:1225256-1225879:1:exon
so has part: feature:1229426-1229443:1:exon

XP_034378946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1225256-1225879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1229426-1229443:1:exon

Large1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Large1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1293141..1718508)
location: region:1293141-1718508:-1
so has part: feature:1293141-1718508:-1:exon
subclass of: SO_0000010

117723033
type: Gene
SIO_000068: ncbigene

position:1293141:-1
position: 1293141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718508:-1
position: 1718508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293141-1718508:-1:exon

Large1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Large1
product: LARGE xylosyl- and glucuronyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 mRNAs, 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522395.1
SIO_010081: Large1
subclass of: SO_0000673
so part of: Large1
location: complement(join(1293141..1294569,1296692..1296887,1301899..1302045,1314005..1314283,1325350..1325513,1343818..1343973,1360889..1361014,1363145..1363257,1385712..1385816,1463583..1463754,1493130..1493253,1503572..1503654,1518477..1518778,1600667..1600854,1717463..1718508))
location: region:1293141-1718508:-1
so has part: feature:1717463-1718508:-1:exon
so has part: feature:1600667-1600854:-1:exon
so has part: feature:1518477-1518778:-1:exon
so has part: feature:1503572-1503654:-1:exon
so has part: feature:1493130-1493253:-1:exon
so has part: feature:1463583-1463754:-1:exon
so has part: feature:1385712-1385816:-1:exon
so has part: feature:1363145-1363257:-1:exon
so has part: feature:1360889-1361014:-1:exon
so has part: feature:1343818-1343973:-1:exon
so has part: feature:1325350-1325513:-1:exon
so has part: feature:1314005-1314283:-1:exon
so has part: feature:1301899-1302045:-1:exon
so has part: feature:1296692-1296887:-1:exon
so has part: feature:1293141-1294569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1717463-1718508:-1:exon

position:1717463:-1
position: 1717463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1600667-1600854:-1:exon

position:1600667:-1
position: 1600667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600854:-1
position: 1600854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1518477-1518778:-1:exon

position:1518477:-1
position: 1518477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518778:-1
position: 1518778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1503572-1503654:-1:exon

position:1503572:-1
position: 1503572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1503654:-1
position: 1503654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1493130-1493253:-1:exon

position:1493130:-1
position: 1493130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493253:-1
position: 1493253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1463583-1463754:-1:exon

position:1463583:-1
position: 1463583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1463754:-1
position: 1463754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1385712-1385816:-1:exon

position:1385712:-1
position: 1385712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1385816:-1
position: 1385816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1363145-1363257:-1:exon

position:1363145:-1
position: 1363145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363257:-1
position: 1363257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1360889-1361014:-1:exon

position:1360889:-1
position: 1360889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361014:-1
position: 1361014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1343818-1343973:-1:exon

position:1343818:-1
position: 1343818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1343973:-1
position: 1343973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1325350-1325513:-1:exon

position:1325350:-1
position: 1325350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325513:-1
position: 1325513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1314005-1314283:-1:exon

position:1314005:-1
position: 1314005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1314283:-1
position: 1314283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1301899-1302045:-1:exon

position:1301899:-1
position: 1301899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302045:-1
position: 1302045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1296692-1296887:-1:exon

position:1296692:-1
position: 1296692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296887:-1
position: 1296887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1293141-1294569:-1:exon

position:1294569:-1
position: 1294569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Large1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Large1
product: LARGE xylosyl- and glucuronyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 mRNAs, 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522396.1
SIO_010081: Large1
subclass of: SO_0000673
so part of: Large1
location: complement(join(1293141..1294569,1296692..1296887,1301899..1302045,1314005..1314283,1325350..1325513,1343818..1343973,1360889..1361014,1363145..1363257,1385712..1385816,1463583..1463754,1493130..1493253,1503572..1503654,1518477..1518778,1600667..1600854,1704423..1704515,1717463..1718508))
location: region:1293141-1718508:-1
so has part: feature:1717463-1718508:-1:exon
so has part: feature:1704423-1704515:-1:exon
so has part: feature:1600667-1600854:-1:exon
so has part: feature:1518477-1518778:-1:exon
so has part: feature:1503572-1503654:-1:exon
so has part: feature:1493130-1493253:-1:exon
so has part: feature:1463583-1463754:-1:exon
so has part: feature:1385712-1385816:-1:exon
so has part: feature:1363145-1363257:-1:exon
so has part: feature:1360889-1361014:-1:exon
so has part: feature:1343818-1343973:-1:exon
so has part: feature:1325350-1325513:-1:exon
so has part: feature:1314005-1314283:-1:exon
so has part: feature:1301899-1302045:-1:exon
so has part: feature:1296692-1296887:-1:exon
so has part: feature:1293141-1294569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1717463-1718508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1704423-1704515:-1:exon

position:1704423:-1
position: 1704423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1704515:-1
position: 1704515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1600667-1600854:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1518477-1518778:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1503572-1503654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1493130-1493253:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1463583-1463754:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1385712-1385816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1363145-1363257:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1360889-1361014:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1343818-1343973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1325350-1325513:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1314005-1314283:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1301899-1302045:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1296692-1296887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1293141-1294569:-1:exon

Large1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Large1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LARGE xylosyl- and glucuronyltransferase 1
translation: MLGICRGRRKFLAASLTLLCIPAITWIYLFAGSFEDGKPVSLSPLESQAHSPRYTASSQRERENLEVRVREVEEENRALRRQLSLAQGQSPAHHRGNHSRTYSMEEGTGDSENLRAGIVAGNSSECGQQPAVEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVQVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNTGVILLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCPSETDVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEFEPSADNTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRQNVGYHIVYKEGQFYPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKAMIVPAFETLRYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYQVEWEADFEPYVVVRRDCPEYDRRFVGFGWNKVAHIMELDAQEYEFTVLPNAYMIHMPHAPSFDITKFRSNKQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS
SIO_010081: Large1
subclass of: SO_0000673
so part of: Large1
location: complement(join(1294372..1294569,1296692..1296887,1301899..1302045,1314005..1314283,1325350..1325513,1343818..1343973,1360889..1361014,1363145..1363257,1385712..1385816,1463583..1463754,1493130..1493253,1503572..1503654,1518477..1518778,1600667..1600772))
location: region:1294372-1600772:-1
so has part: feature:1600667-1600772:-1:exon
so has part: feature:1518477-1518778:-1:exon
so has part: feature:1503572-1503654:-1:exon
so has part: feature:1493130-1493253:-1:exon
so has part: feature:1463583-1463754:-1:exon
so has part: feature:1385712-1385816:-1:exon
so has part: feature:1363145-1363257:-1:exon
so has part: feature:1360889-1361014:-1:exon
so has part: feature:1343818-1343973:-1:exon
so has part: feature:1325350-1325513:-1:exon
so has part: feature:1314005-1314283:-1:exon
so has part: feature:1301899-1302045:-1:exon
so has part: feature:1296692-1296887:-1:exon
so has part: feature:1294372-1294569:-1:exon

XP_034378286.1
type: Protein
SIO_000068: ncbiprotein

position:1294372:-1
position: 1294372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600772:-1
position: 1600772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600667-1600772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1518477-1518778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1503572-1503654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1493130-1493253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1463583-1463754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1385712-1385816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1363145-1363257:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360889-1361014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1343818-1343973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1325350-1325513:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1314005-1314283:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1301899-1302045:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296692-1296887:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1294372-1294569:-1:exon

Large1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Large1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LARGE xylosyl- and glucuronyltransferase 1
translation: MLGICRGRRKFLAASLTLLCIPAITWIYLFAGSFEDGKPVSLSPLESQAHSPRYTASSQRERENLEVRVREVEEENRALRRQLSLAQGQSPAHHRGNHSRTYSMEEGTGDSENLRAGIVAGNSSECGQQPAVEKCETIHVAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHLIADSIAEQILATLFQTWMVPAVQVDFYNADELKSEVSWIPNKHYSGIYGLMKLVLTKTLPANLERVIVLDTDITFATDIAELWAVFHKFKGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGYNTGVILLLLDKLRKMKWEQMWRLTAERELMGMLSTSLADQDIFNAVIKQNPFLVYQLPCFWNVQLSDHTRSEQCYRDVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCPSETDVNSENLQKQLSELDEDDLCYEFRRERFTVHRTHLYFLHYEFEPSADNTDVTLVAQLSMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRQNVGYHIVYKEGQFYPVNLLRNVAMKHISTPYMFLSDIDFLPMYGLYEYLRKSVIQLDLANTKKAMIVPAFETLRYRLSFPKSKAELLSMLDMGTLFTFRYHVWTKGHAPTNFAKWRTATTPYQVEWEADFEPYVVVRRDCPEYDRRFVGFGWNKVAHIMELDAQEYEFTVLPNAYMIHMPHAPSFDITKFRSNKQYRICLKTLKEEFQQDMSRRYGFAALKYLTAENNS
SIO_010081: Large1
subclass of: SO_0000673
so part of: Large1
location: complement(join(1294372..1294569,1296692..1296887,1301899..1302045,1314005..1314283,1325350..1325513,1343818..1343973,1360889..1361014,1363145..1363257,1385712..1385816,1463583..1463754,1493130..1493253,1503572..1503654,1518477..1518778,1600667..1600772))
location: region:1294372-1600772:-1
so has part: feature:1600667-1600772:-1:exon
so has part: feature:1518477-1518778:-1:exon
so has part: feature:1503572-1503654:-1:exon
so has part: feature:1493130-1493253:-1:exon
so has part: feature:1463583-1463754:-1:exon
so has part: feature:1385712-1385816:-1:exon
so has part: feature:1363145-1363257:-1:exon
so has part: feature:1360889-1361014:-1:exon
so has part: feature:1343818-1343973:-1:exon
so has part: feature:1325350-1325513:-1:exon
so has part: feature:1314005-1314283:-1:exon
so has part: feature:1301899-1302045:-1:exon
so has part: feature:1296692-1296887:-1:exon
so has part: feature:1294372-1294569:-1:exon

XP_034378287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1600667-1600772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1518477-1518778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1503572-1503654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1493130-1493253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1463583-1463754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1385712-1385816:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1363145-1363257:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1360889-1361014:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1343818-1343973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1325350-1325513:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1314005-1314283:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1301899-1302045:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296692-1296887:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1294372-1294569:-1:exon

LOC117723591
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723591
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1554668..1554805)
location: region:1554668-1554805:-1
so has part: feature:1554668-1554805:-1:exon
subclass of: SO_0000578

117723591
type: Gene
SIO_000068: ncbigene

position:1554668:-1
position: 1554668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554805:-1
position: 1554805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554668-1554805:-1:exon

LOC117723591
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117723591
product: small nucleolar RNA SNORA76
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00598
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608693.1
SIO_010081: LOC117723591
subclass of: SO_0000673
so part of: LOC117723591
location: complement(1554668..1554805)
location: region:1554668-1554805:-1
so has part: feature:1554668-1554805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1554668-1554805:-1:exon

LOC117723438
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2109034..2109795
location: region:2109034-2109795:1
so has part: feature:2109034-2109795:1:exon

117723438
type: Gene
SIO_000068: ncbigene

position:2109034:1
position: 2109034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109795:1
position: 2109795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2109034-2109795:1:exon

LOC117723438
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723438
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723438
subclass of: SO_0000673
so part of: LOC117723438
location: 2109034..2109795
location: region:2109034-2109795:1
so has part: feature:2109034-2109795:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2109034-2109795:1:exon

LOC117723577
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723577
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2886867..2886996
location: region:2886867-2886996:1
so has part: feature:2886867-2886996:1:exon
subclass of: SO_0000578

117723577
type: Gene
SIO_000068: ncbigene

position:2886867:1
position: 2886867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886996:1
position: 2886996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2886867-2886996:1:exon

LOC117723577
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117723577
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608684.1
SIO_010081: LOC117723577
subclass of: SO_0000673
so part of: LOC117723577
location: 2886867..2886996
location: region:2886867-2886996:1
so has part: feature:2886867-2886996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2886867-2886996:1:exon

Isx
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Isx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3079936..3099909
location: region:3079936-3099909:1
so has part: feature:3079936-3099909:1:exon
subclass of: SO_0000010

117723377
type: Gene
SIO_000068: ncbigene

position:3079936:1
position: 3079936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3099909:1
position: 3099909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3079936-3099909:1:exon

Isx
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Isx
product: intestine specific homeobox, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins
transcript id: XM_034522962.1
SIO_010081: Isx
subclass of: SO_0000673
so part of: Isx
location: join(3079936..3080644,3096358..3096509,3098184..3098300,3099068..3099909)
location: region:3079936-3099909:1
so has part: feature:3079936-3080644:1:exon
so has part: feature:3096358-3096509:1:exon
so has part: feature:3098184-3098300:1:exon
so has part: feature:3099068-3099909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3079936-3080644:1:exon

position:3080644:1
position: 3080644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3096358-3096509:1:exon

position:3096358:1
position: 3096358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3096509:1
position: 3096509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3098184-3098300:1:exon

position:3098184:1
position: 3098184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3098300:1
position: 3098300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3099068-3099909:1:exon

position:3099068:1
position: 3099068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Isx
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Isx
product: intestine specific homeobox, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins
transcript id: XM_034522961.1
SIO_010081: Isx
subclass of: SO_0000673
so part of: Isx
location: join(3079936..3080644,3096358..3096509,3098184..3098259,3099068..3099909)
location: region:3079936-3099909:1
so has part: feature:3079936-3080644:1:exon
so has part: feature:3096358-3096509:1:exon
so has part: feature:3098184-3098259:1:exon
so has part: feature:3099068-3099909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3079936-3080644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3096358-3096509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3098184-3098259:1:exon

position:3098259:1
position: 3098259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3099068-3099909:1:exon

Isx
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Isx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intestine-specific homeobox isoform X1
translation: MAGPTINRDMKKSPGYCEVPEKLSLSFSIEAILKRPTERRNLPRPQCIGGEDSRQTTTPGSKLERSLQDQPQEERKNKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQEKSGNLSAPQQPGSCADTYCFAHISASHRMLPTLSDSAHFKLVPCSDSPCPMAPMGPTAPAWASHPAALCPYLHPPTPTPQVEQHLCNFNIRTGFSLPKQAILLSQ
SIO_010081: Isx
subclass of: SO_0000673
so part of: Isx
location: join(3080428..3080644,3096358..3096509,3098184..3098259,3099068..3099351)
location: region:3080428-3099351:1
so has part: feature:3080428-3080644:1:exon
so has part: feature:3096358-3096509:1:exon
so has part: feature:3098184-3098259:1:exon
so has part: feature:3099068-3099351:1:exon

XP_034378852.1
type: Protein
SIO_000068: ncbiprotein

position:3080428:1
position: 3080428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3099351:1
position: 3099351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3080428-3080644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3096358-3096509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3098184-3098259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099068-3099351:1:exon

Isx
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Isx
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intestine-specific homeobox isoform X2
translation: MAGPTINRDMKKSPGYCEVPEKLSLSFSIEAILKRPTERRNLPRPQCIGGEDSRQTTTPGSKLERSLQDQPQEERKNKRRVRTTFTTEQLQELEKLFHFTHYPDIHVRSQLASRINLPEARVQIWFQNQRAKWRKQEKSGNLSAPQQPGEASLALPSNMDMSGPVLTPTALPTSVPPTECYPLSQTQLTSSWFPAQIPLVPWHLWDLQPLPGLLTQQPCVPTFILPPPHPRWSSICATST
SIO_010081: Isx
subclass of: SO_0000673
so part of: Isx
location: join(3080428..3080644,3096358..3096509,3098184..3098300,3099068..3099304)
location: region:3080428-3099304:1
so has part: feature:3080428-3080644:1:exon
so has part: feature:3096358-3096509:1:exon
so has part: feature:3098184-3098300:1:exon
so has part: feature:3099068-3099304:1:exon

XP_034378853.1
type: Protein
SIO_000068: ncbiprotein

position:3099304:1
position: 3099304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3080428-3080644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3096358-3096509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3098184-3098300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099068-3099304:1:exon

LOC117723439
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3113218..3114054)
location: region:3113218-3114054:-1
so has part: feature:3113218-3114054:-1:exon
subclass of: SO_0000010

117723439
type: Gene
SIO_000068: ncbigene

position:3113218:-1
position: 3113218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3114054:-1
position: 3114054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3113218-3114054:-1:exon

LOC117723439
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723439
product: repetitive proline-rich cell wall protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_034523056.1
SIO_010081: LOC117723439
subclass of: SO_0000673
so part of: LOC117723439
location: complement(3113218..3114054)
location: region:3113218-3114054:-1
so has part: feature:3113218-3114054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3113218-3114054:-1:exon

LOC117723439
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723439
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: repetitive proline-rich cell wall protein 2-like
translation: MGSALDGPALEWPALEGPVLEWPVLERPILEWPALEGPALEWPVLERPVLEWPALEGPVLEGPTLEGPALEWPALDGPALEGPALEWPALEGPVLEGPALEGPVLEGPALEWPVLERPALDGPVLEGPVLEGPALEWPVLERPVLERPALEWPVLEGPALEGPVLERPALDGPVLEGPALEGPALEWPALERPALDGPVLEGPALEGPVLEGPVLEGPALEWPVLEGPVLEGPALEWPVLEGPVLEWPALERPVLEGPALDGPVLEWPVLERPVLECG
SIO_010081: LOC117723439
subclass of: SO_0000673
so part of: LOC117723439
location: complement(3113218..3114054)
location: region:3113218-3114054:-1
so has part: feature:3113218-3114054:-1:exon

XP_034378947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3113218-3114054:-1:exon

Hmgxb4
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Hmgxb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3240635..3279765
location: region:3240635-3279765:1
so has part: feature:3240635-3279765:1:exon
subclass of: SO_0000010

117723215
type: Gene
SIO_000068: ncbigene

position:3240635:1
position: 3240635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3279765:1
position: 3279765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3240635-3279765:1:exon

Hmgxb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Hmgxb4
product: HMG-box containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034522690.1
SIO_010081: Hmgxb4
subclass of: SO_0000673
so part of: Hmgxb4
location: join(3240635..3240734,3245545..3245647,3246267..3246415,3246520..3246598,3246705..3246819,3247360..3248294,3268109..3268190,3269910..3269974,3271335..3271440,3272124..3272293,3277283..3277405,3277780..3279765)
location: region:3240635-3279765:1
so has part: feature:3240635-3240734:1:exon
so has part: feature:3245545-3245647:1:exon
so has part: feature:3246267-3246415:1:exon
so has part: feature:3246520-3246598:1:exon
so has part: feature:3246705-3246819:1:exon
so has part: feature:3247360-3248294:1:exon
so has part: feature:3268109-3268190:1:exon
so has part: feature:3269910-3269974:1:exon
so has part: feature:3271335-3271440:1:exon
so has part: feature:3272124-3272293:1:exon
so has part: feature:3277283-3277405:1:exon
so has part: feature:3277780-3279765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3240635-3240734:1:exon

position:3240734:1
position: 3240734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3245545-3245647:1:exon

position:3245545:1
position: 3245545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3245647:1
position: 3245647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3246267-3246415:1:exon

position:3246267:1
position: 3246267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246415:1
position: 3246415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3246520-3246598:1:exon

position:3246520:1
position: 3246520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246598:1
position: 3246598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3246705-3246819:1:exon

position:3246705:1
position: 3246705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3246819:1
position: 3246819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3247360-3248294:1:exon

position:3247360:1
position: 3247360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3248294:1
position: 3248294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3268109-3268190:1:exon

position:3268109:1
position: 3268109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3268190:1
position: 3268190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3269910-3269974:1:exon

position:3269910:1
position: 3269910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3269974:1
position: 3269974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3271335-3271440:1:exon

position:3271335:1
position: 3271335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3271440:1
position: 3271440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3272124-3272293:1:exon

position:3272124:1
position: 3272124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3272293:1
position: 3272293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3277283-3277405:1:exon

position:3277283:1
position: 3277283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3277405:1
position: 3277405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3277780-3279765:1:exon

position:3277780:1
position: 3277780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hmgxb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Hmgxb4
product: HMG-box containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 1 long SRA read, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034522689.1
SIO_010081: Hmgxb4
subclass of: SO_0000673
so part of: Hmgxb4
location: join(3240635..3240734,3245545..3245647,3246267..3246415,3246520..3246598,3247360..3248294,3268109..3268190,3269910..3269974,3271335..3271440,3272124..3272293,3277283..3277405,3277780..3279765)
location: region:3240635-3279765:1
so has part: feature:3240635-3240734:1:exon
so has part: feature:3245545-3245647:1:exon
so has part: feature:3246267-3246415:1:exon
so has part: feature:3246520-3246598:1:exon
so has part: feature:3247360-3248294:1:exon
so has part: feature:3268109-3268190:1:exon
so has part: feature:3269910-3269974:1:exon
so has part: feature:3271335-3271440:1:exon
so has part: feature:3272124-3272293:1:exon
so has part: feature:3277283-3277405:1:exon
so has part: feature:3277780-3279765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3240635-3240734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3245545-3245647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3246267-3246415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3246520-3246598:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3247360-3248294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3268109-3268190:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3269910-3269974:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271335-3271440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3272124-3272293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3277283-3277405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3277780-3279765:1:exon

Hmgxb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Hmgxb4
product: HMG-box containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522691.1
SIO_010081: Hmgxb4
subclass of: SO_0000673
so part of: Hmgxb4
location: join(3240675..3240734,3246267..3246415,3246520..3246598,3246705..3246819,3247360..3248294,3268109..3268190,3269910..3269974,3271335..3271440,3272124..3272293,3277283..3277405,3277780..3279765)
location: region:3240675-3279765:1
so has part: feature:3240675-3240734:1:exon
so has part: feature:3246267-3246415:1:exon
so has part: feature:3246520-3246598:1:exon
so has part: feature:3246705-3246819:1:exon
so has part: feature:3247360-3248294:1:exon
so has part: feature:3268109-3268190:1:exon
so has part: feature:3269910-3269974:1:exon
so has part: feature:3271335-3271440:1:exon
so has part: feature:3272124-3272293:1:exon
so has part: feature:3277283-3277405:1:exon
so has part: feature:3277780-3279765:1:exon

position:3240675:1
position: 3240675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3240675-3240734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246267-3246415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3246520-3246598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3246705-3246819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3247360-3248294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3268109-3268190:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3269910-3269974:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3271335-3271440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3272124-3272293:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3277283-3277405:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3277780-3279765:1:exon

Hmgxb4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Hmgxb4
product: HMG-box containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522692.1
SIO_010081: Hmgxb4
subclass of: SO_0000673
so part of: Hmgxb4
location: join(3240681..3240734,3246267..3246415,3246520..3246598,3247360..3248294,3268109..3268190,3269910..3269974,3271335..3271440,3272124..3272293,3277283..3277405,3277780..3279765)
location: region:3240681-3279765:1
so has part: feature:3240681-3240734:1:exon
so has part: feature:3246267-3246415:1:exon
so has part: feature:3246520-3246598:1:exon
so has part: feature:3247360-3248294:1:exon
so has part: feature:3268109-3268190:1:exon
so has part: feature:3269910-3269974:1:exon
so has part: feature:3271335-3271440:1:exon
so has part: feature:3272124-3272293:1:exon
so has part: feature:3277283-3277405:1:exon
so has part: feature:3277780-3279765:1:exon

position:3240681:1
position: 3240681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3240681-3240734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246267-3246415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3246520-3246598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3247360-3248294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3268109-3268190:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3269910-3269974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271335-3271440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3272124-3272293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3277283-3277405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3277780-3279765:1:exon

Hmgxb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Hmgxb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 4 isoform X1
translation: MAYDDSMKKEDCFDGDHSFEDIGLAAGRSQREKKRSYKDFLREEEEVAAQVRSSSKKKLKDSDLFFLGTDTHKKKRKHSPDDYYYGDISTLESSQKKKKKSSPQSPDTAMDLLKAITSPLAAGAKSSKKAGEKSSSSSSHSESRKEHHKKKGNGSSGELSLDDSNAHKPKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVEEEAFQYPAQQASLKKPSKKLARDEQGALLLGHELQSLLKTARKKHKSSSDSHSSPGPEGCGSDASQLPEPHSANLDITGLDPILVESESSSAGELEAGELVIDDSYREIKKKKKSKKSKKKKDKDRHKEKRHSRTKRSSAREHGPAREHVLIPGPASSIPTLPPAALHTDGHGEKKKKREEKDRERERVEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSAEGSMKVRASSVGILSPQKKSLPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL
SIO_010081: Hmgxb4
subclass of: SO_0000673
so part of: Hmgxb4
location: join(3245617..3245647,3246267..3246415,3246520..3246598,3247360..3248294,3268109..3268190,3269910..3269974,3271335..3271440,3272124..3272293,3277283..3277405,3277780..3277824)
location: region:3245617-3277824:1
so has part: feature:3245617-3245647:1:exon
so has part: feature:3246267-3246415:1:exon
so has part: feature:3246520-3246598:1:exon
so has part: feature:3247360-3248294:1:exon
so has part: feature:3268109-3268190:1:exon
so has part: feature:3269910-3269974:1:exon
so has part: feature:3271335-3271440:1:exon
so has part: feature:3272124-3272293:1:exon
so has part: feature:3277283-3277405:1:exon
so has part: feature:3277780-3277824:1:exon

XP_034378580.1
type: Protein
SIO_000068: ncbiprotein

position:3245617:1
position: 3245617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3277824:1
position: 3277824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3245617-3245647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3246267-3246415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3246520-3246598:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3247360-3248294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3268109-3268190:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3269910-3269974:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3271335-3271440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3272124-3272293:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3277283-3277405:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3277780-3277824:1:exon

Hmgxb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Hmgxb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 4 isoform X2
translation: MDLLKAITSPLAAGAKSSKKAGEKSSSSSSHSESRKEHHKKKGNGSSGELSLDDSNAHKPKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVEEEAFQYPAQQASLKKPSKKLARDEQGALLLGHELQSLLKTARKKHKSSSDSHSSPGPEGCGSDASQLPEPHSANLDITGLDPILVESESSSAGELEAGELVIDDSYREIKKKKKSKKSKKKKDKDRHKEKRHSRTKRSSAREHGPAREHVLIPGPASSIPTLPPAALHTDGHGEKKKKREEKDRERERVEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSAEGSMKVRASSVGILSPQKKSLPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL
SIO_010081: Hmgxb4
subclass of: SO_0000673
so part of: Hmgxb4
location: join(3247428..3248294,3268109..3268190,3269910..3269974,3271335..3271440,3272124..3272293,3277283..3277405,3277780..3277824)
location: region:3247428-3277824:1
so has part: feature:3247428-3248294:1:exon
so has part: feature:3268109-3268190:1:exon
so has part: feature:3269910-3269974:1:exon
so has part: feature:3271335-3271440:1:exon
so has part: feature:3272124-3272293:1:exon
so has part: feature:3277283-3277405:1:exon
so has part: feature:3277780-3277824:1:exon

XP_034378581.1
type: Protein
SIO_000068: ncbiprotein

position:3247428:1
position: 3247428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3247428-3248294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3268109-3268190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3269910-3269974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3271335-3271440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3272124-3272293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3277283-3277405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3277780-3277824:1:exon

Hmgxb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Hmgxb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 4 isoform X2
translation: MDLLKAITSPLAAGAKSSKKAGEKSSSSSSHSESRKEHHKKKGNGSSGELSLDDSNAHKPKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVEEEAFQYPAQQASLKKPSKKLARDEQGALLLGHELQSLLKTARKKHKSSSDSHSSPGPEGCGSDASQLPEPHSANLDITGLDPILVESESSSAGELEAGELVIDDSYREIKKKKKSKKSKKKKDKDRHKEKRHSRTKRSSAREHGPAREHVLIPGPASSIPTLPPAALHTDGHGEKKKKREEKDRERERVEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSAEGSMKVRASSVGILSPQKKSLPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL
SIO_010081: Hmgxb4
subclass of: SO_0000673
so part of: Hmgxb4
location: join(3247428..3248294,3268109..3268190,3269910..3269974,3271335..3271440,3272124..3272293,3277283..3277405,3277780..3277824)
location: region:3247428-3277824:1
so has part: feature:3247428-3248294:1:exon
so has part: feature:3268109-3268190:1:exon
so has part: feature:3269910-3269974:1:exon
so has part: feature:3271335-3271440:1:exon
so has part: feature:3272124-3272293:1:exon
so has part: feature:3277283-3277405:1:exon
so has part: feature:3277780-3277824:1:exon

XP_034378582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3247428-3248294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3268109-3268190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3269910-3269974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3271335-3271440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3272124-3272293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3277283-3277405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3277780-3277824:1:exon

Hmgxb4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Hmgxb4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HMG domain-containing protein 4 isoform X2
translation: MDLLKAITSPLAAGAKSSKKAGEKSSSSSSHSESRKEHHKKKGNGSSGELSLDDSNAHKPKKMKPLYVNTETLTLREPDGLKMKLILSPKEKGSSSVEEEAFQYPAQQASLKKPSKKLARDEQGALLLGHELQSLLKTARKKHKSSSDSHSSPGPEGCGSDASQLPEPHSANLDITGLDPILVESESSSAGELEAGELVIDDSYREIKKKKKSKKSKKKKDKDRHKEKRHSRTKRSSAREHGPAREHVLIPGPASSIPTLPPAALHTDGHGEKKKKREEKDRERERVEKPKKKNMSAYQVFCKEYRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKASSAEGSMKVRASSVGILSPQKKSLPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPGL
SIO_010081: Hmgxb4
subclass of: SO_0000673
so part of: Hmgxb4
location: join(3247428..3248294,3268109..3268190,3269910..3269974,3271335..3271440,3272124..3272293,3277283..3277405,3277780..3277824)
location: region:3247428-3277824:1
so has part: feature:3247428-3248294:1:exon
so has part: feature:3268109-3268190:1:exon
so has part: feature:3269910-3269974:1:exon
so has part: feature:3271335-3271440:1:exon
so has part: feature:3272124-3272293:1:exon
so has part: feature:3277283-3277405:1:exon
so has part: feature:3277780-3277824:1:exon

XP_034378583.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3247428-3248294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3268109-3268190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3269910-3269974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3271335-3271440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3272124-3272293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3277283-3277405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3277780-3277824:1:exon

Tom1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tom1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3281802..3317688
location: region:3281802-3317688:1
so has part: feature:3281802-3317688:1:exon
subclass of: SO_0000010

117723244
type: Gene
SIO_000068: ncbigene

position:3281802:1
position: 3281802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3317688:1
position: 3317688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3281802-3317688:1:exon

Tom1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tom1
product: target of myb1 membrane trafficking protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 4 long SRA reads, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522725.1
SIO_010081: Tom1
subclass of: SO_0000673
so part of: Tom1
location: join(3281802..3282023,3296052..3296136,3298439..3298517,3299747..3299896,3300166..3300300,3300392..3300538,3303068..3303184,3305668..3305801,3306733..3306766,3307015..3307108,3308827..3308947,3312031..3312106,3314977..3315036,3316653..3316692,3316811..3317688)
location: region:3281802-3317688:1
so has part: feature:3281802-3282023:1:exon
so has part: feature:3296052-3296136:1:exon
so has part: feature:3298439-3298517:1:exon
so has part: feature:3299747-3299896:1:exon
so has part: feature:3300166-3300300:1:exon
so has part: feature:3300392-3300538:1:exon
so has part: feature:3303068-3303184:1:exon
so has part: feature:3305668-3305801:1:exon
so has part: feature:3306733-3306766:1:exon
so has part: feature:3307015-3307108:1:exon
so has part: feature:3308827-3308947:1:exon
so has part: feature:3312031-3312106:1:exon
so has part: feature:3314977-3315036:1:exon
so has part: feature:3316653-3316692:1:exon
so has part: feature:3316811-3317688:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3281802-3282023:1:exon

position:3282023:1
position: 3282023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3296052-3296136:1:exon

position:3296052:1
position: 3296052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3296136:1
position: 3296136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3298439-3298517:1:exon

position:3298439:1
position: 3298439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3298517:1
position: 3298517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3299747-3299896:1:exon

position:3299747:1
position: 3299747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3299896:1
position: 3299896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3300166-3300300:1:exon

position:3300166:1
position: 3300166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300300:1
position: 3300300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3300392-3300538:1:exon

position:3300392:1
position: 3300392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3300538:1
position: 3300538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3303068-3303184:1:exon

position:3303068:1
position: 3303068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3303184:1
position: 3303184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3305668-3305801:1:exon

position:3305668:1
position: 3305668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3305801:1
position: 3305801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3306733-3306766:1:exon

position:3306733:1
position: 3306733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3306766:1
position: 3306766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3307015-3307108:1:exon

position:3307015:1
position: 3307015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3307108:1
position: 3307108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3308827-3308947:1:exon

position:3308827:1
position: 3308827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3308947:1
position: 3308947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3312031-3312106:1:exon

position:3312031:1
position: 3312031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3312106:1
position: 3312106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3314977-3315036:1:exon

position:3314977:1
position: 3314977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3315036:1
position: 3315036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3316653-3316692:1:exon

position:3316653:1
position: 3316653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3316692:1
position: 3316692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3316811-3317688:1:exon

position:3316811:1
position: 3316811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tom1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tom1
product: target of myb1 membrane trafficking protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034522726.1
SIO_010081: Tom1
subclass of: SO_0000673
so part of: Tom1
location: join(3281911..3282023,3296052..3296136,3298439..3298517,3299747..3299878,3300166..3300300,3300392..3300538,3303068..3303184,3305668..3305801,3306733..3306766,3307015..3307108,3308827..3308947,3312031..3312106,3314977..3315036,3316653..3316692,3316811..3317688)
location: region:3281911-3317688:1
so has part: feature:3281911-3282023:1:exon
so has part: feature:3296052-3296136:1:exon
so has part: feature:3298439-3298517:1:exon
so has part: feature:3299747-3299878:1:exon
so has part: feature:3300166-3300300:1:exon
so has part: feature:3300392-3300538:1:exon
so has part: feature:3303068-3303184:1:exon
so has part: feature:3305668-3305801:1:exon
so has part: feature:3306733-3306766:1:exon
so has part: feature:3307015-3307108:1:exon
so has part: feature:3308827-3308947:1:exon
so has part: feature:3312031-3312106:1:exon
so has part: feature:3314977-3315036:1:exon
so has part: feature:3316653-3316692:1:exon
so has part: feature:3316811-3317688:1:exon

position:3281911:1
position: 3281911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3281911-3282023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296052-3296136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3298439-3298517:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3299747-3299878:1:exon

position:3299878:1
position: 3299878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3300166-3300300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300392-3300538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3303068-3303184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3305668-3305801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3306733-3306766:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3307015-3307108:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308827-3308947:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3312031-3312106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3314977-3315036:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3316653-3316692:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3316811-3317688:1:exon

Tom1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tom1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of Myb protein 1 isoform X1
translation: MDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVENVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSSPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETPSGQNSVGSNSSQRRDPSQHVTPLPTPAVLPGDSPITPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQVEPADLELLQELNRTCRAMQQRILELIPRISNEQLTEELLMINDNLNNVFLRHERFERFRTGQTAKASSEAELAADLIDMGPDPAATSNLSSQLAGMNLGSSSVRAGLQSLETSGHLEDDFDMFALTRGSSLADQRKGVKYEAPQTTDGLAGALDARQQSTGAIPATQARIMEDIEQWLSTDVGNSAEEPSGVTSEEFDKFLEERAKAADRLPNLASPSAEGPSRPSPGTAPRRKTQEKDDDMLFAL
SIO_010081: Tom1
subclass of: SO_0000673
so part of: Tom1
location: join(3281972..3282023,3296052..3296136,3298439..3298517,3299747..3299896,3300166..3300300,3300392..3300538,3303068..3303184,3305668..3305801,3306733..3306766,3307015..3307108,3308827..3308947,3312031..3312106,3314977..3315036,3316653..3316692,3316811..3316965)
location: region:3281972-3316965:1
so has part: feature:3281972-3282023:1:exon
so has part: feature:3296052-3296136:1:exon
so has part: feature:3298439-3298517:1:exon
so has part: feature:3299747-3299896:1:exon
so has part: feature:3300166-3300300:1:exon
so has part: feature:3300392-3300538:1:exon
so has part: feature:3303068-3303184:1:exon
so has part: feature:3305668-3305801:1:exon
so has part: feature:3306733-3306766:1:exon
so has part: feature:3307015-3307108:1:exon
so has part: feature:3308827-3308947:1:exon
so has part: feature:3312031-3312106:1:exon
so has part: feature:3314977-3315036:1:exon
so has part: feature:3316653-3316692:1:exon
so has part: feature:3316811-3316965:1:exon

XP_034378616.1
type: Protein
SIO_000068: ncbiprotein

position:3281972:1
position: 3281972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3316965:1
position: 3316965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3281972-3282023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296052-3296136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3298439-3298517:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3299747-3299896:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300166-3300300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300392-3300538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3303068-3303184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3305668-3305801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3306733-3306766:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3307015-3307108:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308827-3308947:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3312031-3312106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3314977-3315036:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3316653-3316692:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3316811-3316965:1:exon

Tom1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tom1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of Myb protein 1 isoform X2
translation: MDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVENVLVRTILPKNNPPTIVHDKSWADAFRSSPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETPSGQNSVGSNSSQRRDPSQHVTPLPTPAVLPGDSPITPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQVEPADLELLQELNRTCRAMQQRILELIPRISNEQLTEELLMINDNLNNVFLRHERFERFRTGQTAKASSEAELAADLIDMGPDPAATSNLSSQLAGMNLGSSSVRAGLQSLETSGHLEDDFDMFALTRGSSLADQRKGVKYEAPQTTDGLAGALDARQQSTGAIPATQARIMEDIEQWLSTDVGNSAEEPSGVTSEEFDKFLEERAKAADRLPNLASPSAEGPSRPSPGTAPRRKTQEKDDDMLFAL
SIO_010081: Tom1
subclass of: SO_0000673
so part of: Tom1
location: join(3281972..3282023,3296052..3296136,3298439..3298517,3299747..3299878,3300166..3300300,3300392..3300538,3303068..3303184,3305668..3305801,3306733..3306766,3307015..3307108,3308827..3308947,3312031..3312106,3314977..3315036,3316653..3316692,3316811..3316965)
location: region:3281972-3316965:1
so has part: feature:3281972-3282023:1:exon
so has part: feature:3296052-3296136:1:exon
so has part: feature:3298439-3298517:1:exon
so has part: feature:3299747-3299878:1:exon
so has part: feature:3300166-3300300:1:exon
so has part: feature:3300392-3300538:1:exon
so has part: feature:3303068-3303184:1:exon
so has part: feature:3305668-3305801:1:exon
so has part: feature:3306733-3306766:1:exon
so has part: feature:3307015-3307108:1:exon
so has part: feature:3308827-3308947:1:exon
so has part: feature:3312031-3312106:1:exon
so has part: feature:3314977-3315036:1:exon
so has part: feature:3316653-3316692:1:exon
so has part: feature:3316811-3316965:1:exon

XP_034378617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3281972-3282023:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3296052-3296136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3298439-3298517:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3299747-3299878:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3300166-3300300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300392-3300538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3303068-3303184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3305668-3305801:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3306733-3306766:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3307015-3307108:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3308827-3308947:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3312031-3312106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3314977-3315036:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3316653-3316692:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3316811-3316965:1:exon

Hmox1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Hmox1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3340210..3347177
location: region:3340210-3347177:1
so has part: feature:3340210-3347177:1:exon
subclass of: SO_0000010

117723006
type: Gene
SIO_000068: ncbigene

position:3340210:1
position: 3340210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3347177:1
position: 3347177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3340210-3347177:1:exon

Hmox1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Hmox1
product: heme oxygenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 1 long SRA read, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522346.1
SIO_010081: Hmox1
subclass of: SO_0000673
so part of: Hmox1
location: join(3340210..3340358,3342334..3342454,3343358..3343849,3345326..3345425,3346484..3347177)
location: region:3340210-3347177:1
so has part: feature:3340210-3340358:1:exon
so has part: feature:3342334-3342454:1:exon
so has part: feature:3343358-3343849:1:exon
so has part: feature:3345326-3345425:1:exon
so has part: feature:3346484-3347177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3340210-3340358:1:exon

position:3340358:1
position: 3340358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3342334-3342454:1:exon

position:3342334:1
position: 3342334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3342454:1
position: 3342454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3343358-3343849:1:exon

position:3343358:1
position: 3343358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3343849:1
position: 3343849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3345326-3345425:1:exon

position:3345326:1
position: 3345326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3345425:1
position: 3345425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3346484-3347177:1:exon

position:3346484:1
position: 3346484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hmox1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Hmox1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme oxygenase 1
translation: MERPQPDSMPQDLSEALKEATKEVHIQAENAEFMKNFQKGQVSREGFKLVMASLYHIYTALEEEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQETIPYTPATQHYVKRLHEVGCTHPELLVAHAYTRYLGDLSGGQVLKKIAQKAMALPSSGEGLAFFTFPNIDSPTKFKQLYRARMNTLEMTPEVKHRVTEEAKTAFLLNIELFEELQVLLTEEHKDQSPSQTESLRQRPASLVQDTAPAETPRGKPQISTGSSQTPLLRWILTLSFLLATVAVGIYAM
SIO_010081: Hmox1
subclass of: SO_0000673
so part of: Hmox1
location: join(3340336..3340358,3342334..3342454,3343358..3343849,3345326..3345425,3346484..3346617)
location: region:3340336-3346617:1
so has part: feature:3340336-3340358:1:exon
so has part: feature:3342334-3342454:1:exon
so has part: feature:3343358-3343849:1:exon
so has part: feature:3345326-3345425:1:exon
so has part: feature:3346484-3346617:1:exon

XP_034378237.1
type: Protein
SIO_000068: ncbiprotein

position:3340336:1
position: 3340336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3346617:1
position: 3346617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3340336-3340358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3342334-3342454:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3343358-3343849:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3345326-3345425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3346484-3346617:1:exon

Mcm5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mcm5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3355059..3375750
location: region:3355059-3375750:1
so has part: feature:3355059-3375750:1:exon
subclass of: SO_0000010

117723007
type: Gene
SIO_000068: ncbigene

position:3355059:1
position: 3355059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3375750:1
position: 3375750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355059-3375750:1:exon

Mcm5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mcm5
product: minichromosome maintenance complex component 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 mRNAs, 2 long SRA reads, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034522347.1
SIO_010081: Mcm5
subclass of: SO_0000673
so part of: Mcm5
location: join(3355059..3355151,3355256..3355430,3355641..3355767,3355848..3355976,3360614..3360786,3362232..3362387,3363965..3364131,3365575..3365746,3366973..3367084,3368492..3368635,3368949..3369014,3369278..3369454,3370110..3370222,3371257..3371385,3372500..3372642,3373891..3374018,3374840..3375750)
location: region:3355059-3375750:1
so has part: feature:3355059-3355151:1:exon
so has part: feature:3355256-3355430:1:exon
so has part: feature:3355641-3355767:1:exon
so has part: feature:3355848-3355976:1:exon
so has part: feature:3360614-3360786:1:exon
so has part: feature:3362232-3362387:1:exon
so has part: feature:3363965-3364131:1:exon
so has part: feature:3365575-3365746:1:exon
so has part: feature:3366973-3367084:1:exon
so has part: feature:3368492-3368635:1:exon
so has part: feature:3368949-3369014:1:exon
so has part: feature:3369278-3369454:1:exon
so has part: feature:3370110-3370222:1:exon
so has part: feature:3371257-3371385:1:exon
so has part: feature:3372500-3372642:1:exon
so has part: feature:3373891-3374018:1:exon
so has part: feature:3374840-3375750:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3355059-3355151:1:exon

position:3355151:1
position: 3355151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3355256-3355430:1:exon

position:3355256:1
position: 3355256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3355430:1
position: 3355430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3355641-3355767:1:exon

position:3355641:1
position: 3355641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3355767:1
position: 3355767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3355848-3355976:1:exon

position:3355848:1
position: 3355848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3355976:1
position: 3355976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3360614-3360786:1:exon

position:3360614:1
position: 3360614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3360786:1
position: 3360786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3362232-3362387:1:exon

position:3362232:1
position: 3362232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3362387:1
position: 3362387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3363965-3364131:1:exon

position:3363965:1
position: 3363965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3364131:1
position: 3364131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3365575-3365746:1:exon

position:3365575:1
position: 3365575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3365746:1
position: 3365746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3366973-3367084:1:exon

position:3366973:1
position: 3366973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3367084:1
position: 3367084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3368492-3368635:1:exon

position:3368492:1
position: 3368492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368635:1
position: 3368635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3368949-3369014:1:exon

position:3368949:1
position: 3368949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3369014:1
position: 3369014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3369278-3369454:1:exon

position:3369278:1
position: 3369278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3369454:1
position: 3369454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3370110-3370222:1:exon

position:3370110:1
position: 3370110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3370222:1
position: 3370222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3371257-3371385:1:exon

position:3371257:1
position: 3371257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3371385:1
position: 3371385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3372500-3372642:1:exon

position:3372500:1
position: 3372500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3372642:1
position: 3372642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3373891-3374018:1:exon

position:3373891:1
position: 3373891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3374018:1
position: 3374018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3374840-3375750:1:exon

position:3374840:1
position: 3374840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mcm5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mcm5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication licensing factor MCM5
translation: MSGFDDPGIFYSDSFGGDPGAEEGQARKSQLQRRFKEFLRQYRVGTDRTGFTFKYRDELKRHYNLGEYWIEVEMEDLASFDEELADYLYKQPAEHLQLLEEAAKEVADEVTRPRPAGDELLQDIQVMLKSDASPSSIRILKSDMMSHLVKIPGIIISASAVRAKATRISIQCRSCHNTLTNIAMRPGLEGYALPRKCNMDQAGRPKCPLDPYFIMPDKCKCVDFQTLKLQELPDAVPHGEMPRHMQLYCDRYLCDKVVPGNRVTIMGIYSIKKFGLNPSKGRDRVGVGIRSSYIRVLGIQVDTDGSGRSFAGSVSPQEEEEFRRLAALPNIYELVSKSISPSIFGGMDMKKAIACLLFGGSRKRLPDGLTRRGDINLLMLGDPGTAKSQLLKFVEKCSPIGVYTSGKGSSAAGLTASVMRDPSSRNFIMEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDETKGEDNIDFMPTILSRFDMIFIVKDEHNEERDMMLAKHVITLHVSALTQTQAVEGEIDLAKMKKFIAYCRARCGPRLSAEAAEKLKNRYIIMRSGARQHERDSDRRSSIPITVRQLEAIVRIAEALSKMKLQPFATEADVEEALRLFQVSTLDAALSGNLSGVEGFTTQEDQEMLSRIEKQLKRRFAIGSQVSEHSIVQDFTKQKYPEHAIRKVLQLMLRRGEIQHRMQRKVLYRLK
SIO_010081: Mcm5
subclass of: SO_0000673
so part of: Mcm5
location: join(3355264..3355430,3355641..3355767,3355848..3355976,3360614..3360786,3362232..3362387,3363965..3364131,3365575..3365746,3366973..3367084,3368492..3368635,3368949..3369014,3369278..3369454,3370110..3370222,3371257..3371385,3372500..3372642,3373891..3374018,3374840..3374941)
location: region:3355264-3374941:1
so has part: feature:3355264-3355430:1:exon
so has part: feature:3355641-3355767:1:exon
so has part: feature:3355848-3355976:1:exon
so has part: feature:3360614-3360786:1:exon
so has part: feature:3362232-3362387:1:exon
so has part: feature:3363965-3364131:1:exon
so has part: feature:3365575-3365746:1:exon
so has part: feature:3366973-3367084:1:exon
so has part: feature:3368492-3368635:1:exon
so has part: feature:3368949-3369014:1:exon
so has part: feature:3369278-3369454:1:exon
so has part: feature:3370110-3370222:1:exon
so has part: feature:3371257-3371385:1:exon
so has part: feature:3372500-3372642:1:exon
so has part: feature:3373891-3374018:1:exon
so has part: feature:3374840-3374941:1:exon

XP_034378238.1
type: Protein
SIO_000068: ncbiprotein

position:3355264:1
position: 3355264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3374941:1
position: 3374941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355264-3355430:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3355641-3355767:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3355848-3355976:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3360614-3360786:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3362232-3362387:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3363965-3364131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3365575-3365746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3366973-3367084:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3368492-3368635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3368949-3369014:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3369278-3369454:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3370110-3370222:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3371257-3371385:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3372500-3372642:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3373891-3374018:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3374840-3374941:1:exon

Rasd2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Rasd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3452288..3462902
location: region:3452288-3462902:1
so has part: feature:3452288-3462902:1:exon
subclass of: SO_0000010

117722855
type: Gene
SIO_000068: ncbigene

position:3452288:1
position: 3452288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3462902:1
position: 3462902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3452288-3462902:1:exon

Rasd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rasd2
product: RASD family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 long SRA reads, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034522096.1
SIO_010081: Rasd2
subclass of: SO_0000673
so part of: Rasd2
location: join(3452288..3453225,3457510..3457789,3460536..3462902)
location: region:3452288-3462902:1
so has part: feature:3452288-3453225:1:exon
so has part: feature:3457510-3457789:1:exon
so has part: feature:3460536-3462902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3452288-3453225:1:exon

position:3453225:1
position: 3453225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3457510-3457789:1:exon

position:3457510:1
position: 3457510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3457789:1
position: 3457789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3460536-3462902:1:exon

position:3460536:1
position: 3460536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rasd2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rasd2
product: RASD family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 8 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034522094.1
SIO_010081: Rasd2
subclass of: SO_0000673
so part of: Rasd2
location: join(3453392..3453743,3457510..3457789,3460536..3462896)
location: region:3453392-3462896:1
so has part: feature:3453392-3453743:1:exon
so has part: feature:3457510-3457789:1:exon
so has part: feature:3460536-3462896:1:exon

position:3453392:1
position: 3453392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3462896:1
position: 3462896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3453392-3453743:1:exon

position:3453743:1
position: 3453743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3457510-3457789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3460536-3462896:1:exon

Rasd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rasd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein Rhes
translation: MMKTLSSGNCTLNVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIHGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDSRESFDEVKRLQKQILEVKSCLKNKTKEAAELPMVICGNKNDHSELCRQVPAMEAELLVSGDENCAYFEVSAKKNTNVNEMFYVLFSMAKLPHEMSPALHHKISVQYGDAFHPRPFCMRRTKVAGAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCSIQ
SIO_010081: Rasd2
subclass of: SO_0000673
so part of: Rasd2
location: join(3457519..3457789,3460536..3461065)
location: region:3457519-3461065:1
so has part: feature:3457519-3457789:1:exon
so has part: feature:3460536-3461065:1:exon

XP_034377985.1
type: Protein
SIO_000068: ncbiprotein

position:3457519:1
position: 3457519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3461065:1
position: 3461065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3457519-3457789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3460536-3461065:1:exon

Rasd2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rasd2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein Rhes
translation: MMKTLSSGNCTLNVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIHGDMYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDSRESFDEVKRLQKQILEVKSCLKNKTKEAAELPMVICGNKNDHSELCRQVPAMEAELLVSGDENCAYFEVSAKKNTNVNEMFYVLFSMAKLPHEMSPALHHKISVQYGDAFHPRPFCMRRTKVAGAYGMVSPFARRPSVNSDLKYIKAKVLREGQARERDKCSIQ
SIO_010081: Rasd2
subclass of: SO_0000673
so part of: Rasd2
location: join(3457519..3457789,3460536..3461065)
location: region:3457519-3461065:1
so has part: feature:3457519-3457789:1:exon
so has part: feature:3460536-3461065:1:exon

XP_034377987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3457519-3457789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3460536-3461065:1:exon

LOC117722894
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3642877..3643214
location: region:3642877-3643214:1
so has part: feature:3642877-3643214:1:exon

117722894
type: Gene
SIO_000068: ncbigene

position:3642877:1
position: 3642877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3643214:1
position: 3643214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3642877-3643214:1:exon

LOC117722894
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117722894
subclass of: SO_0000673
so part of: LOC117722894
location: 3642877..3643214
location: region:3642877-3643214:1
so has part: feature:3642877-3643214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3642877-3643214:1:exon

LOC117723632
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723632
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3723809..3724015)
location: region:3723809-3724015:-1
so has part: feature:3723809-3724015:-1:exon
subclass of: SO_0000578

117723632
type: Gene
SIO_000068: ncbigene

position:3723809:-1
position: 3723809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3724015:-1
position: 3724015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3723809-3724015:-1:exon

LOC117723632
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117723632
product: small nucleolar RNA U3
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608728.1
SIO_010081: LOC117723632
subclass of: SO_0000673
so part of: LOC117723632
location: complement(3723809..3724015)
location: region:3723809-3724015:-1
so has part: feature:3723809-3724015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3723809-3724015:-1:exon

LOC117723323
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3785967..3786661
location: region:3785967-3786661:1
so has part: feature:3785967-3786661:1:exon

117723323
type: Gene
SIO_000068: ncbigene

position:3785967:1
position: 3785967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3786661:1
position: 3786661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3785967-3786661:1:exon

LOC117723323
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723323
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723323
subclass of: SO_0000673
so part of: LOC117723323
location: 3785967..3786661
location: region:3785967-3786661:1
so has part: feature:3785967-3786661:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3785967-3786661:1:exon

Iqcm
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Iqcm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3814860..4136269
location: region:3814860-4136269:1
so has part: feature:3814860-4136269:1:exon
subclass of: SO_0000010

117723324
type: Gene
SIO_000068: ncbigene

position:3814860:1
position: 3814860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4136269:1
position: 4136269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3814860-4136269:1:exon

Iqcm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Iqcm
product: IQ motif containing M
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_034522869.1
SIO_010081: Iqcm
subclass of: SO_0000673
so part of: Iqcm
location: join(3814860..3814896,3819681..3819763,3821231..3821495,3854229..3854319,3858273..3858352,3919085..3919200,3947606..3947664,3963451..3963646,3972290..3972434,3979155..3979289,4076616..4076777,4136166..4136269)
location: region:3814860-4136269:1
so has part: feature:3814860-3814896:1:exon
so has part: feature:3819681-3819763:1:exon
so has part: feature:3821231-3821495:1:exon
so has part: feature:3854229-3854319:1:exon
so has part: feature:3858273-3858352:1:exon
so has part: feature:3919085-3919200:1:exon
so has part: feature:3947606-3947664:1:exon
so has part: feature:3963451-3963646:1:exon
so has part: feature:3972290-3972434:1:exon
so has part: feature:3979155-3979289:1:exon
so has part: feature:4076616-4076777:1:exon
so has part: feature:4136166-4136269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3814860-3814896:1:exon

position:3814896:1
position: 3814896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3819681-3819763:1:exon

position:3819681:1
position: 3819681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3819763:1
position: 3819763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3821231-3821495:1:exon

position:3821231:1
position: 3821231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3821495:1
position: 3821495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3854229-3854319:1:exon

position:3854229:1
position: 3854229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3854319:1
position: 3854319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3858273-3858352:1:exon

position:3858273:1
position: 3858273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3858352:1
position: 3858352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3919085-3919200:1:exon

position:3919085:1
position: 3919085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3919200:1
position: 3919200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3947606-3947664:1:exon

position:3947606:1
position: 3947606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3947664:1
position: 3947664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3963451-3963646:1:exon

position:3963451:1
position: 3963451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3963646:1
position: 3963646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3972290-3972434:1:exon

position:3972290:1
position: 3972290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3972434:1
position: 3972434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3979155-3979289:1:exon

position:3979155:1
position: 3979155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3979289:1
position: 3979289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4076616-4076777:1:exon

position:4076616:1
position: 4076616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4076777:1
position: 4076777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4136166-4136269:1:exon

position:4136166:1
position: 4136166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Iqcm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Iqcm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ domain-containing protein M
translation: MATAEAIPGAVEGPVLETTQQDFLQEAKALIAQHYKRLNENKVQGTSIDVFKNKHQKPKTGKFIPFEVKKSEILNVVQEHRLVLRSISYPRGASKCTTLIEASQQISFKEPHVSNIKEKYHPVDLFKKETVKLGKIMNDIESVSKRMEKEKEMHLGKSRMLEPFHSHIGLPLHNLTSSLGLLKELADRTLYDWKSTASIISSHLPHESAQHLSESSVMFKDYYMRPYKKKDIQPIKRDLKPDKRLKTIVKSDKIDSKVKRIGPHIEIYQLFQGRKKPIFTKRIVKLVVTVQAFIRGWLERKRLQRIKSKALYHGPNLKAVIKMYQSLIHRVRHRLGLWRTRQIIYFAELEEWMDRKKFYETMFAKREDWQGLERSELMKYFNDCGHFPTQTQIDEFWDLFHRNSKGQYSEVIKKSNAIELLFTLYPPQGARVNVSTRLRSTWLRPLVDGEEGYKYIVNGHPILKRANIRTVGKLVARSIRERKMRQFYKS
SIO_010081: Iqcm
subclass of: SO_0000673
so part of: Iqcm
location: join(3814860..3814896,3819681..3819763,3821231..3821495,3854229..3854319,3858273..3858352,3919085..3919200,3947606..3947664,3963451..3963646,3972290..3972434,3979155..3979289,4076616..4076777,4136166..4136269)
location: region:3814860-4136269:1
so has part: feature:3814860-3814896:1:exon
so has part: feature:3819681-3819763:1:exon
so has part: feature:3821231-3821495:1:exon
so has part: feature:3854229-3854319:1:exon
so has part: feature:3858273-3858352:1:exon
so has part: feature:3919085-3919200:1:exon
so has part: feature:3947606-3947664:1:exon
so has part: feature:3963451-3963646:1:exon
so has part: feature:3972290-3972434:1:exon
so has part: feature:3979155-3979289:1:exon
so has part: feature:4076616-4076777:1:exon
so has part: feature:4136166-4136269:1:exon

XP_034378760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3814860-3814896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3819681-3819763:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3821231-3821495:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3854229-3854319:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3858273-3858352:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3919085-3919200:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3947606-3947664:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3963451-3963646:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3972290-3972434:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3979155-3979289:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4076616-4076777:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4136166-4136269:1:exon

Nr3c2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Nr3c2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4951559..5276534
location: region:4951559-5276534:1
so has part: feature:4951559-5276534:1:exon
subclass of: SO_0000010

117723230
type: Gene
SIO_000068: ncbigene

position:4951559:1
position: 4951559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5276534:1
position: 5276534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4951559-5276534:1:exon

Nr3c2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nr3c2
product: nuclear receptor subfamily 3 group C member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 long SRA reads, 32 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034522707.1
SIO_010081: Nr3c2
subclass of: SO_0000673
so part of: Nr3c2
location: join(4951559..4951893,4957431..4959189,5122362..5122501,5190944..5191060,5213402..5213740,5215249..5215393,5242182..5242312,5249071..5249228,5273898..5276534)
location: region:4951559-5276534:1
so has part: feature:4951559-4951893:1:exon
so has part: feature:4957431-4959189:1:exon
so has part: feature:5122362-5122501:1:exon
so has part: feature:5190944-5191060:1:exon
so has part: feature:5213402-5213740:1:exon
so has part: feature:5215249-5215393:1:exon
so has part: feature:5242182-5242312:1:exon
so has part: feature:5249071-5249228:1:exon
so has part: feature:5273898-5276534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4951559-4951893:1:exon

position:4951893:1
position: 4951893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4957431-4959189:1:exon

position:4957431:1
position: 4957431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4959189:1
position: 4959189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5122362-5122501:1:exon

position:5122362:1
position: 5122362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5122501:1
position: 5122501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5190944-5191060:1:exon

position:5190944:1
position: 5190944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5191060:1
position: 5191060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5213402-5213740:1:exon

position:5213402:1
position: 5213402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5213740:1
position: 5213740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5215249-5215393:1:exon

position:5215249:1
position: 5215249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5215393:1
position: 5215393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5242182-5242312:1:exon

position:5242182:1
position: 5242182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5242312:1
position: 5242312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5249071-5249228:1:exon

position:5249071:1
position: 5249071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5249228:1
position: 5249228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5273898-5276534:1:exon

position:5273898:1
position: 5273898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nr3c2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nr3c2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mineralocorticoid receptor
translation: METKGYHSLPEGLDMERRWSQVSQTLERSSLGPAERTNENNYMEIVNVSCVSGAIQNNSTQGSSKEKHELLPCLQQDNSRSGILPSDIKTELESKELSATVAESMGLYMDSVRDAEYTYDQQNQQGSLSPAKIYQNMEQLVKFYKENGHRSSTLSAMSRPLRSFMPDSGASMNGGAMRAIVKSPIICHEKSPSVCSPLNLPSSVCSPAGINSMSSSTASFGSFPVHSPITQGTSLTCSPSVENRGSRSHSPAHASNVGSPLSSPLSSMKSPISSPPSHCSVKSPVSSPNNVPLRSSVSSPANLNNSRCSVSSPSNTNNRSTLSSPTASTVGSIGSPISNAFSYATSGASAGAGAIQDVVPSPDTHEKGAHDVPFPKTEEVEKAISNGVTGQLNIVQYIKPEPDGAFSSSCLGGNNKINPSSPFSVPIKQESSKHSCSGASFKGNPTVNPFPFMDGSYFSFMDDKDYYSLSGILGPPVPGFDGSCEGSAFPVGIKQEPDDGSYYPETSIPSSAIVGVNSGGQSFHYRIGAQGTISLSRSPRDQSFQHLSSFPPVNTLVESWKPHGDLSSRRSDGYPVLEYIPENVSSSTLRSVSTGSSRPSKICLVCGDEASGCHYGVVTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRLQKCLQAGMNLGARKSKKLGKLKGLHEEQPQQPPPPPPQSPEEGTTYIAPTKEPSVNSALVPQLASITRALTPSPAMILENIEPEIVYAGYDNSKPDTAESLLSTLNRLAGKQMIQVVKWAKVLPGFKNLPLEDQITLIQYSWMCLSSFALSWRSYKHTNSQFLYFAPDLVFNEEKMHQSAMYELCQGMRQISLQFVRLQLTFEEYSIMKVLLLLSTVPKDGLKSQTAFEEMRTNYIKELRKMVTKCPNSSGQSWQRFYQLTKLLDSMHDLVNDLLEFCFYTFRESQALKVEFPAMLVEIISDQLPKVESGNAKPLYFHRK
SIO_010081: Nr3c2
subclass of: SO_0000673
so part of: Nr3c2
location: join(4957433..4959189,5122362..5122501,5190944..5191060,5213402..5213740,5215249..5215393,5242182..5242312,5249071..5249228,5273898..5274053)
location: region:4957433-5274053:1
so has part: feature:4957433-4959189:1:exon
so has part: feature:5122362-5122501:1:exon
so has part: feature:5190944-5191060:1:exon
so has part: feature:5213402-5213740:1:exon
so has part: feature:5215249-5215393:1:exon
so has part: feature:5242182-5242312:1:exon
so has part: feature:5249071-5249228:1:exon
so has part: feature:5273898-5274053:1:exon

XP_034378598.1
type: Protein
SIO_000068: ncbiprotein

position:4957433:1
position: 4957433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5274053:1
position: 5274053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4957433-4959189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5122362-5122501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5190944-5191060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5213402-5213740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5215249-5215393:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5242182-5242312:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5249071-5249228:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5273898-5274053:1:exon

LOC117723585
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723585
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5177756..5177868)
location: region:5177756-5177868:-1
so has part: feature:5177756-5177868:-1:exon

117723585
type: Gene
SIO_000068: ncbigene

position:5177756:-1
position: 5177756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5177868:-1
position: 5177868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5177756-5177868:-1:exon

LOC117723585
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723585
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117723585
subclass of: SO_0000673
so part of: LOC117723585
location: complement(5177756..5177868)
location: region:5177756-5177868:-1
so has part: feature:5177756-5177868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5177756-5177868:-1:exon

Arhgap10
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Arhgap10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5281870..5520495)
location: region:5281870-5520495:-1
so has part: feature:5281870-5520495:-1:exon
subclass of: SO_0000010

117723028
type: Gene
SIO_000068: ncbigene

position:5281870:-1
position: 5281870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5520495:-1
position: 5520495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5281870-5520495:-1:exon

Arhgap10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Arhgap10
product: Rho GTPase activating protein 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034522388.1
SIO_010081: Arhgap10
subclass of: SO_0000673
so part of: Arhgap10
location: complement(join(5281870..5282549,5288612..5288703,5290369..5290521,5307066..5307225,5326264..5326414,5350148..5350307,5352187..5352292,5357414..5357472,5364670..5364757,5371177..5371251,5390817..5390882,5392893..5392938,5396712..5396793,5412100..5412194,5413647..5413753,5416072..5416201,5422798..5422902,5423407..5423517,5430063..5430164,5437478..5437549,5454905..5454966,5455040..5455135,5520227..5520495))
location: region:5281870-5520495:-1
so has part: feature:5520227-5520495:-1:exon
so has part: feature:5455040-5455135:-1:exon
so has part: feature:5454905-5454966:-1:exon
so has part: feature:5437478-5437549:-1:exon
so has part: feature:5430063-5430164:-1:exon
so has part: feature:5423407-5423517:-1:exon
so has part: feature:5422798-5422902:-1:exon
so has part: feature:5416072-5416201:-1:exon
so has part: feature:5413647-5413753:-1:exon
so has part: feature:5412100-5412194:-1:exon
so has part: feature:5396712-5396793:-1:exon
so has part: feature:5392893-5392938:-1:exon
so has part: feature:5390817-5390882:-1:exon
so has part: feature:5371177-5371251:-1:exon
so has part: feature:5364670-5364757:-1:exon
so has part: feature:5357414-5357472:-1:exon
so has part: feature:5352187-5352292:-1:exon
so has part: feature:5350148-5350307:-1:exon
so has part: feature:5326264-5326414:-1:exon
so has part: feature:5307066-5307225:-1:exon
so has part: feature:5290369-5290521:-1:exon
so has part: feature:5288612-5288703:-1:exon
so has part: feature:5281870-5282549:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5520227-5520495:-1:exon

position:5520227:-1
position: 5520227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5455040-5455135:-1:exon

position:5455040:-1
position: 5455040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5455135:-1
position: 5455135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5454905-5454966:-1:exon

position:5454905:-1
position: 5454905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5454966:-1
position: 5454966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5437478-5437549:-1:exon

position:5437478:-1
position: 5437478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5437549:-1
position: 5437549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5430063-5430164:-1:exon

position:5430063:-1
position: 5430063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5430164:-1
position: 5430164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5423407-5423517:-1:exon

position:5423407:-1
position: 5423407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5423517:-1
position: 5423517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5422798-5422902:-1:exon

position:5422798:-1
position: 5422798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5422902:-1
position: 5422902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5416072-5416201:-1:exon

position:5416072:-1
position: 5416072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5416201:-1
position: 5416201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5413647-5413753:-1:exon

position:5413647:-1
position: 5413647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5413753:-1
position: 5413753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5412100-5412194:-1:exon

position:5412100:-1
position: 5412100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5412194:-1
position: 5412194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5396712-5396793:-1:exon

position:5396712:-1
position: 5396712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5396793:-1
position: 5396793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5392893-5392938:-1:exon

position:5392893:-1
position: 5392893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5392938:-1
position: 5392938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5390817-5390882:-1:exon

position:5390817:-1
position: 5390817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5390882:-1
position: 5390882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5371177-5371251:-1:exon

position:5371177:-1
position: 5371177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5371251:-1
position: 5371251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5364670-5364757:-1:exon

position:5364670:-1
position: 5364670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5364757:-1
position: 5364757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5357414-5357472:-1:exon

position:5357414:-1
position: 5357414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5357472:-1
position: 5357472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5352187-5352292:-1:exon

position:5352187:-1
position: 5352187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5352292:-1
position: 5352292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5350148-5350307:-1:exon

position:5350148:-1
position: 5350148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5350307:-1
position: 5350307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5326264-5326414:-1:exon

position:5326264:-1
position: 5326264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5326414:-1
position: 5326414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5307066-5307225:-1:exon

position:5307066:-1
position: 5307066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5307225:-1
position: 5307225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5290369-5290521:-1:exon

position:5290369:-1
position: 5290369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5290521:-1
position: 5290521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5288612-5288703:-1:exon

position:5288612:-1
position: 5288612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5288703:-1
position: 5288703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5281870-5282549:-1:exon

position:5282549:-1
position: 5282549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Arhgap10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Arhgap10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 10
translation: MGLQPLEFSDCYLDSPWFRERIRAHEAELERTNKFIKELIKDGKNLISATKSLSAAQRKFAHSLRDFKFEFIGDAETDDERCIDASLREFSNFLKNLEEQREIMALSVTETLIKPLEKFRKEQLGAVKEEKKKFDKETEKNYSLIDKHLALSARKKDSHLQEADLQVEQNRQHFYELSLEYVCKLQEIQERKKFEFVEPMLSFFQGMFTFYHQGHELSKDFNHYKMELQINIQNTRNRFEGTRSEVEELMNKIRQNPKDQKRASQFTAEGYLYVQEKRPAPFGSSWVKHYCMYRKTAKKFNMIPFEHRSGGKLGDGEAFFLKECTKRHIDSIDRRFCFDIEAADRPGVPLTVQAFSEEERKQWLEALGGKEALFHTFNRAVVPRPEGGAQLDKMGFTILRKCISAVETRGINDQGLYRVVGVSSKVQRLLSMLMDVKMCNELDLENSTDWEVKTVTSALKQYLRSLPEPLMTYELHRDFIVPAKSGSPESRVNAIHFLVHKLPEKNKEMLDILVKHLTNVSSHSKQNLMTVANLGVVFGPTLMRPQEETVAAIMDLKFQNIVVEILIENHEKIFRTSPDTTLAEPMCLSASPPNAPPRQSKRQGQRTKRPVAVYNLCLELEEGESPSPLKEDPPSSSQDSLSTPSPTTSAAHGPLGPDRNHLVADGGNCGDTTAMTPSQTRPSMVQWLNMQSPTTPSSNPAGTPPSPRMSPFPLSPAASIVDKLPECVINRKARAVYPCEAEHSSELSFEIGAIFEDVQTSREPGWLEGTLNGKRGLIPQNYVKLL
SIO_010081: Arhgap10
subclass of: SO_0000673
so part of: Arhgap10
location: complement(join(5282461..5282549,5288612..5288703,5290369..5290521,5307066..5307225,5326264..5326414,5350148..5350307,5352187..5352292,5357414..5357472,5364670..5364757,5371177..5371251,5390817..5390882,5392893..5392938,5396712..5396793,5412100..5412194,5413647..5413753,5416072..5416201,5422798..5422902,5423407..5423517,5430063..5430164,5437478..5437549,5454905..5454966,5455040..5455135,5520227..5520380))
location: region:5282461-5520380:-1
so has part: feature:5520227-5520380:-1:exon
so has part: feature:5455040-5455135:-1:exon
so has part: feature:5454905-5454966:-1:exon
so has part: feature:5437478-5437549:-1:exon
so has part: feature:5430063-5430164:-1:exon
so has part: feature:5423407-5423517:-1:exon
so has part: feature:5422798-5422902:-1:exon
so has part: feature:5416072-5416201:-1:exon
so has part: feature:5413647-5413753:-1:exon
so has part: feature:5412100-5412194:-1:exon
so has part: feature:5396712-5396793:-1:exon
so has part: feature:5392893-5392938:-1:exon
so has part: feature:5390817-5390882:-1:exon
so has part: feature:5371177-5371251:-1:exon
so has part: feature:5364670-5364757:-1:exon
so has part: feature:5357414-5357472:-1:exon
so has part: feature:5352187-5352292:-1:exon
so has part: feature:5350148-5350307:-1:exon
so has part: feature:5326264-5326414:-1:exon
so has part: feature:5307066-5307225:-1:exon
so has part: feature:5290369-5290521:-1:exon
so has part: feature:5288612-5288703:-1:exon
so has part: feature:5282461-5282549:-1:exon

XP_034378279.1
type: Protein
SIO_000068: ncbiprotein

position:5282461:-1
position: 5282461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5520380:-1
position: 5520380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5520227-5520380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5455040-5455135:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5454905-5454966:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5437478-5437549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5430063-5430164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5423407-5423517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5422798-5422902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5416072-5416201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5413647-5413753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5412100-5412194:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5396712-5396793:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5392893-5392938:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5390817-5390882:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5371177-5371251:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5364670-5364757:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5357414-5357472:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5352187-5352292:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5350148-5350307:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5326264-5326414:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5307066-5307225:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5290369-5290521:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5288612-5288703:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5282461-5282549:-1:exon

LOC117723029
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5393198..5393805
location: region:5393198-5393805:1
so has part: feature:5393198-5393805:1:exon

117723029
type: Gene
SIO_000068: ncbigene

position:5393198:1
position: 5393198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5393805:1
position: 5393805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5393198-5393805:1:exon

LOC117723029
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723029
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723029
subclass of: SO_0000673
so part of: LOC117723029
location: 5393198..5393805
location: region:5393198-5393805:1
so has part: feature:5393198-5393805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5393198-5393805:1:exon

Prmt9
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Prmt9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5555543..5586872
location: region:5555543-5586872:1
so has part: feature:5555543-5586872:1:exon
subclass of: SO_0000010

117723241
type: Gene
SIO_000068: ncbigene

position:5555543:1
position: 5555543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5586872:1
position: 5586872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5555543-5586872:1:exon

Prmt9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Prmt9
product: protein arginine methyltransferase 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522719.1
SIO_010081: Prmt9
subclass of: SO_0000673
so part of: Prmt9
location: join(5555543..5555866,5561427..5561575,5564837..5565073,5566136..5566303,5567403..5567505,5569136..5569242,5570683..5570875,5572721..5572904,5576296..5577013,5581050..5581203,5586277..5586399,5586571..5586872)
location: region:5555543-5586872:1
so has part: feature:5555543-5555866:1:exon
so has part: feature:5561427-5561575:1:exon
so has part: feature:5564837-5565073:1:exon
so has part: feature:5566136-5566303:1:exon
so has part: feature:5567403-5567505:1:exon
so has part: feature:5569136-5569242:1:exon
so has part: feature:5570683-5570875:1:exon
so has part: feature:5572721-5572904:1:exon
so has part: feature:5576296-5577013:1:exon
so has part: feature:5581050-5581203:1:exon
so has part: feature:5586277-5586399:1:exon
so has part: feature:5586571-5586872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5555543-5555866:1:exon

position:5555866:1
position: 5555866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5561427-5561575:1:exon

position:5561427:1
position: 5561427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5561575:1
position: 5561575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5564837-5565073:1:exon

position:5564837:1
position: 5564837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5565073:1
position: 5565073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5566136-5566303:1:exon

position:5566136:1
position: 5566136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5566303:1
position: 5566303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5567403-5567505:1:exon

position:5567403:1
position: 5567403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5567505:1
position: 5567505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5569136-5569242:1:exon

position:5569136:1
position: 5569136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5569242:1
position: 5569242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5570683-5570875:1:exon

position:5570683:1
position: 5570683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5570875:1
position: 5570875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5572721-5572904:1:exon

position:5572721:1
position: 5572721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5572904:1
position: 5572904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5576296-5577013:1:exon

position:5576296:1
position: 5576296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5577013:1
position: 5577013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5581050-5581203:1:exon

position:5581050:1
position: 5581050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5581203:1
position: 5581203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5586277-5586399:1:exon

position:5586277:1
position: 5586277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5586399:1
position: 5586399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5586571-5586872:1:exon

position:5586571:1
position: 5586571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Prmt9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Prmt9
product: protein arginine methyltransferase 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034522720.1
SIO_010081: Prmt9
subclass of: SO_0000673
so part of: Prmt9
location: join(5555547..5555866,5561427..5561575,5564837..5565073,5566136..5566303,5567438..5567505,5569136..5569242,5570683..5570875,5572721..5572904,5576296..5577013,5581050..5581203,5586277..5586399,5586571..5586872)
location: region:5555547-5586872:1
so has part: feature:5555547-5555866:1:exon
so has part: feature:5561427-5561575:1:exon
so has part: feature:5564837-5565073:1:exon
so has part: feature:5566136-5566303:1:exon
so has part: feature:5567438-5567505:1:exon
so has part: feature:5569136-5569242:1:exon
so has part: feature:5570683-5570875:1:exon
so has part: feature:5572721-5572904:1:exon
so has part: feature:5576296-5577013:1:exon
so has part: feature:5581050-5581203:1:exon
so has part: feature:5586277-5586399:1:exon
so has part: feature:5586571-5586872:1:exon

position:5555547:1
position: 5555547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5555547-5555866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5561427-5561575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5564837-5565073:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5566136-5566303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5567438-5567505:1:exon

position:5567438:1
position: 5567438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5569136-5569242:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5570683-5570875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5572721-5572904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5576296-5577013:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5581050-5581203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5586277-5586399:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5586571-5586872:1:exon

Prmt9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Prmt9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 9 isoform X1
translation: MPNSRPRPRRGAGGGADAASRDRLVARSLQSAEHCLGDQDFGTAYAHYLLVLSLAPELKDDVKETFQYTLFKWAEELHALSRIQDLLGCYEQALELFPDDEVICNSMGEHLFRMGFRDEAAGYFHKAVKLNPDFNDAKENFYRVANWLVERWHFIMLNDTKRNKIYNAAIQKAVRGGSKTVLDIGTGTGILSMFAKKAGAHSVYACELSKTMYELACDVVAANKMENGIKLLHMKSLDIEIPKHIPERVSLVVTETVDAGVFGEGIVESLIHAWENLLLQPKTKGENGNFGKYGKVIPASAVIFGMAVECAEIRRHHRVGAKDIAGIRLPTNVKFRSPAYSSVDTEEIVEPYTTEKMSGIPGGYLPLTECFQIMKVDFNNLEELKSLATKKPYSLNVPAVKAGMLDAIMVWFVLQLDDEHSLSTGPSEETCWEQAVYPVQALEDYCIQPGDRVTMEASCHDCYLRIQGISILHLEHEMEVIRSSTNSTDLLSLGNEAELCSALANLQTSRPEALEQTCVLEPTEIALLNNIPYHEGFKTAMRKVLSSLAPEPLCQPMDTHCQYMEMNSESGQSNTAPSTSDPFYVLDVSEGFSLLPILAGTLGQVKPYSSVEKDQHCVALDLISEANHFPKETLEFWLRHIEDEAAVLQRPKSDKLWSIIILDVIEPSGLIQQEIMEKAAISRCLLQSGGKIFPQYVLMFGMLVQSQTLVEESAVQGTEHTLGLNIAPFINQFQVPIRVCLDLSSLPCVPLSQPVELLRLDLMTPYLNTSNREVKVRVCRSGRVTAVPFWFHLCLDDEVRLDTSGEASHWKQAAVVLDHPIQVQAGEELVLSVEHHKSNVSITVRQ
SIO_010081: Prmt9
subclass of: SO_0000673
so part of: Prmt9
location: join(5555678..5555866,5561427..5561575,5564837..5565073,5566136..5566303,5567403..5567505,5569136..5569242,5570683..5570875,5572721..5572904,5576296..5577013,5581050..5581203,5586277..5586399,5586571..5586786)
location: region:5555678-5586786:1
so has part: feature:5555678-5555866:1:exon
so has part: feature:5561427-5561575:1:exon
so has part: feature:5564837-5565073:1:exon
so has part: feature:5566136-5566303:1:exon
so has part: feature:5567403-5567505:1:exon
so has part: feature:5569136-5569242:1:exon
so has part: feature:5570683-5570875:1:exon
so has part: feature:5572721-5572904:1:exon
so has part: feature:5576296-5577013:1:exon
so has part: feature:5581050-5581203:1:exon
so has part: feature:5586277-5586399:1:exon
so has part: feature:5586571-5586786:1:exon

XP_034378610.1
type: Protein
SIO_000068: ncbiprotein

position:5555678:1
position: 5555678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5586786:1
position: 5586786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5555678-5555866:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5561427-5561575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5564837-5565073:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5566136-5566303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5567403-5567505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5569136-5569242:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5570683-5570875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5572721-5572904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5576296-5577013:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5581050-5581203:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5586277-5586399:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5586571-5586786:1:exon

Prmt9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Prmt9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 9 isoform X2
translation: MAVECAEIRRHHRVGAKDIAGIRLPTNVKFRSPAYSSVDTEEIVEPYTTEKMSGIPGGYLPLTECFQIMKVDFNNLEELKSLATKKPYSLNVPAVKAGMLDAIMVWFVLQLDDEHSLSTGPSEETCWEQAVYPVQALEDYCIQPGDRVTMEASCHDCYLRIQGISILHLEHEMEVIRSSTNSTDLLSLGNEAELCSALANLQTSRPEALEQTCVLEPTEIALLNNIPYHEGFKTAMRKVLSSLAPEPLCQPMDTHCQYMEMNSESGQSNTAPSTSDPFYVLDVSEGFSLLPILAGTLGQVKPYSSVEKDQHCVALDLISEANHFPKETLEFWLRHIEDEAAVLQRPKSDKLWSIIILDVIEPSGLIQQEIMEKAAISRCLLQSGGKIFPQYVLMFGMLVQSQTLVEESAVQGTEHTLGLNIAPFINQFQVPIRVCLDLSSLPCVPLSQPVELLRLDLMTPYLNTSNREVKVRVCRSGRVTAVPFWFHLCLDDEVRLDTSGEASHWKQAAVVLDHPIQVQAGEELVLSVEHHKSNVSITVRQ
SIO_010081: Prmt9
subclass of: SO_0000673
so part of: Prmt9
location: join(5569205..5569242,5570683..5570875,5572721..5572904,5576296..5577013,5581050..5581203,5586277..5586399,5586571..5586786)
location: region:5569205-5586786:1
so has part: feature:5569205-5569242:1:exon
so has part: feature:5570683-5570875:1:exon
so has part: feature:5572721-5572904:1:exon
so has part: feature:5576296-5577013:1:exon
so has part: feature:5581050-5581203:1:exon
so has part: feature:5586277-5586399:1:exon
so has part: feature:5586571-5586786:1:exon

XP_034378611.1
type: Protein
SIO_000068: ncbiprotein

position:5569205:1
position: 5569205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5569205-5569242:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5570683-5570875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5572721-5572904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5576296-5577013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5581050-5581203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5586277-5586399:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5586571-5586786:1:exon

Tmem184c
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tmem184c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5609887..5624367)
location: region:5609887-5624367:-1
so has part: feature:5609887-5624367:-1:exon
subclass of: SO_0000010

117723420
type: Gene
SIO_000068: ncbigene

position:5609887:-1
position: 5609887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5624367:-1
position: 5624367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5609887-5624367:-1:exon

Tmem184c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tmem184c
product: transmembrane protein 184C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523038.1
SIO_010081: Tmem184c
subclass of: SO_0000673
so part of: Tmem184c
location: complement(join(5609887..5610806,5611318..5611489,5611928..5612027,5613057..5613169,5615010..5615103,5616644..5616718,5618548..5618753,5620355..5620391,5620482..5620612,5623790..5624367))
location: region:5609887-5624367:-1
so has part: feature:5623790-5624367:-1:exon
so has part: feature:5620482-5620612:-1:exon
so has part: feature:5620355-5620391:-1:exon
so has part: feature:5618548-5618753:-1:exon
so has part: feature:5616644-5616718:-1:exon
so has part: feature:5615010-5615103:-1:exon
so has part: feature:5613057-5613169:-1:exon
so has part: feature:5611928-5612027:-1:exon
so has part: feature:5611318-5611489:-1:exon
so has part: feature:5609887-5610806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5623790-5624367:-1:exon

position:5623790:-1
position: 5623790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5620482-5620612:-1:exon

position:5620482:-1
position: 5620482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5620612:-1
position: 5620612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5620355-5620391:-1:exon

position:5620355:-1
position: 5620355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5620391:-1
position: 5620391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5618548-5618753:-1:exon

position:5618548:-1
position: 5618548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5618753:-1
position: 5618753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5616644-5616718:-1:exon

position:5616644:-1
position: 5616644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5616718:-1
position: 5616718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5615010-5615103:-1:exon

position:5615010:-1
position: 5615010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5615103:-1
position: 5615103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5613057-5613169:-1:exon

position:5613057:-1
position: 5613057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5613169:-1
position: 5613169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5611928-5612027:-1:exon

position:5611928:-1
position: 5611928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5612027:-1
position: 5612027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5611318-5611489:-1:exon

position:5611318:-1
position: 5611318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5611489:-1
position: 5611489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5609887-5610806:-1:exon

position:5610806:-1
position: 5610806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem184c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tmem184c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 184C
translation: MKMPCVCNLNNWRRWIRPLLIFLYGSALFVLIPICIWEFQRMEVGIHTKAWFIAGLFVLLTIPVSMWGILQHLVHYTQPELQKPIVRILWMVPIYSLDSWLALKYPKIAIYVDTCRECYEAYVIYNFMIFLTNYLTIRFPSLMLHLEGKDQQNHLPPLCCCPPWAMGEMLLFRCKLGVLQYTVVRLITTSTALVCEISGVYDEGNFSFANAWTYLVILNNLSQLFAMYCLLLFYKVLREELSPIQPVGKFLCVKLVVFVSFWQAVIIALLVKVGVISERRTWEWQSAEAVATGLQDFIICIEMFFAAIAHHYSFSYKPYVHASEEVSCFYSFLAMWDVSDIKDDISEQVRRVGRTMRGYSKKKRFPGDPDHNEHSSLLPPSQDKKASRSSRSSSPVGLYQGLGHTIRSQSPISVPTLSEDILNDISEEQQKLLDTGQDIVIDIPDEQEIPAENQYQEQLQTAVSWTLRYSAQSPEDTTIDIPDWEDDETSDSSSDVTF
SIO_010081: Tmem184c
subclass of: SO_0000673
so part of: Tmem184c
location: complement(join(5610367..5610806,5611318..5611489,5611928..5612027,5613057..5613169,5615010..5615103,5616644..5616718,5618548..5618753,5620355..5620391,5620482..5620612,5623790..5623918))
location: region:5610367-5623918:-1
so has part: feature:5623790-5623918:-1:exon
so has part: feature:5620482-5620612:-1:exon
so has part: feature:5620355-5620391:-1:exon
so has part: feature:5618548-5618753:-1:exon
so has part: feature:5616644-5616718:-1:exon
so has part: feature:5615010-5615103:-1:exon
so has part: feature:5613057-5613169:-1:exon
so has part: feature:5611928-5612027:-1:exon
so has part: feature:5611318-5611489:-1:exon
so has part: feature:5610367-5610806:-1:exon

XP_034378929.1
type: Protein
SIO_000068: ncbiprotein

position:5610367:-1
position: 5610367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5623918:-1
position: 5623918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5623790-5623918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5620482-5620612:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5620355-5620391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5618548-5618753:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5616644-5616718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5615010-5615103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5613057-5613169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5611928-5612027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5611318-5611489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5610367-5610806:-1:exon

Ednra
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ednra
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5664942..5725886)
location: region:5664942-5725886:-1
so has part: feature:5664942-5725886:-1:exon
subclass of: SO_0000010

117723408
type: Gene
SIO_000068: ncbigene

position:5664942:-1
position: 5664942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5725886:-1
position: 5725886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5664942-5725886:-1:exon

Ednra
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ednra
product: endothelin receptor type A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 long SRA read, 19 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034523019.1
SIO_010081: Ednra
subclass of: SO_0000673
so part of: Ednra
location: complement(join(5664942..5668123,5669787..5669895,5670373..5670506,5673731..5673883,5677154..5677352,5691372..5691499,5721401..5721879,5725515..5725886))
location: region:5664942-5725886:-1
so has part: feature:5725515-5725886:-1:exon
so has part: feature:5721401-5721879:-1:exon
so has part: feature:5691372-5691499:-1:exon
so has part: feature:5677154-5677352:-1:exon
so has part: feature:5673731-5673883:-1:exon
so has part: feature:5670373-5670506:-1:exon
so has part: feature:5669787-5669895:-1:exon
so has part: feature:5664942-5668123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5725515-5725886:-1:exon

position:5725515:-1
position: 5725515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5721401-5721879:-1:exon

position:5721401:-1
position: 5721401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5721879:-1
position: 5721879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5691372-5691499:-1:exon

position:5691372:-1
position: 5691372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5691499:-1
position: 5691499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5677154-5677352:-1:exon

position:5677154:-1
position: 5677154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5677352:-1
position: 5677352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5673731-5673883:-1:exon

position:5673731:-1
position: 5673731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5673883:-1
position: 5673883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5670373-5670506:-1:exon

position:5670373:-1
position: 5670373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5670506:-1
position: 5670506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5669787-5669895:-1:exon

position:5669787:-1
position: 5669787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5669895:-1
position: 5669895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5664942-5668123:-1:exon

position:5668123:-1
position: 5668123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ednra
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ednra
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelin-1 receptor
translation: MDVFCLAAPFCLALVGGAIADNPERYSANQSSHFTPFPGTEFNFLDTTHRPPNLALPSNGSMHGYCPQQTKITTAFKYINTVISCTIFIVGMVGNATLLRIIYQNKCMRNGPNALIASLALGDLIYVVIDLPINVFKLLARRWPFDHNDFGVFLCKLFPFLQKSSVGITVLNLCALSVDRYRAVASWSRVQGIGIPLITAIEIVSIWILSFILAIPEAIGFVMVPFEYKGEMHRTCMLNATSKFMEFYQDVKDWWLFGFYFCMPLVCTAIFYTLMTCEMLNRRNGSLRIALSEHLKQRREVAKTVFCLVVIFALCWFPLHLSRILKKTVYDEMDKNRCELLSFLLLMDYIGINLATMNSCINPIALYFVSKKFKNCFQSCLCCCCHQSKSLMTSVPMNGTSIQWKNQEQNNHNTERSSHKDSMN
SIO_010081: Ednra
subclass of: SO_0000673
so part of: Ednra
location: complement(join(5667983..5668123,5669787..5669895,5670373..5670506,5673731..5673883,5677154..5677352,5691372..5691499,5721401..5721811))
location: region:5667983-5721811:-1
so has part: feature:5721401-5721811:-1:exon
so has part: feature:5691372-5691499:-1:exon
so has part: feature:5677154-5677352:-1:exon
so has part: feature:5673731-5673883:-1:exon
so has part: feature:5670373-5670506:-1:exon
so has part: feature:5669787-5669895:-1:exon
so has part: feature:5667983-5668123:-1:exon

XP_034378910.1
type: Protein
SIO_000068: ncbiprotein

position:5667983:-1
position: 5667983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5721811:-1
position: 5721811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5721401-5721811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5691372-5691499:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5677154-5677352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5673731-5673883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5670373-5670506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5669787-5669895:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5667983-5668123:-1:exon

LOC117723573
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723573
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5787193..5787320
location: region:5787193-5787320:1
so has part: feature:5787193-5787320:1:exon
subclass of: SO_0000578

117723573
type: Gene
SIO_000068: ncbigene

position:5787193:1
position: 5787193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5787320:1
position: 5787320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5787193-5787320:1:exon

LOC117723573
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117723573
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608681.1
SIO_010081: LOC117723573
subclass of: SO_0000673
so part of: LOC117723573
location: 5787193..5787320
location: region:5787193-5787320:1
so has part: feature:5787193-5787320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5787193-5787320:1:exon

LOC117723639
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723639
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5815109..5815210
location: region:5815109-5815210:1
so has part: feature:5815109-5815210:1:exon
subclass of: SO_0000623

117723639
type: Gene
SIO_000068: ncbigene

position:5815109:1
position: 5815109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5815210:1
position: 5815210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5815109-5815210:1:exon

LOC117723639
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117723639
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608734.1
SIO_010081: LOC117723639
subclass of: SO_0000673
so part of: LOC117723639
location: 5815109..5815210
location: region:5815109-5815210:1
so has part: feature:5815109-5815210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5815109-5815210:1:exon

LOC117723286
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5923094..5923876)
location: region:5923094-5923876:-1
so has part: feature:5923094-5923876:-1:exon

117723286
type: Gene
SIO_000068: ncbigene

position:5923094:-1
position: 5923094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5923876:-1
position: 5923876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5923094-5923876:-1:exon

LOC117723286
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: LOC117723286
product: nascent polypeptide-associated complex subunit alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_004608650.1
SIO_010081: LOC117723286
so part of: LOC117723286
location: complement(5923094..5923876)
location: region:5923094-5923876:-1
so has part: feature:5923094-5923876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5923094-5923876:-1:exon

LOC117723536
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6089526..6089681
location: region:6089526-6089681:1
so has part: feature:6089526-6089681:1:exon
subclass of: SO_0000010

117723536
type: Gene
SIO_000068: ncbigene

position:6089526:1
position: 6089526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6089681:1
position: 6089681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6089526-6089681:1:exon

LOC117723536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723536
product: 60S ribosomal protein L39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_034523172.1
SIO_010081: LOC117723536
subclass of: SO_0000673
so part of: LOC117723536
location: 6089526..6089681
location: region:6089526-6089681:1
so has part: feature:6089526-6089681:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6089526-6089681:1:exon

LOC117723536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L39-like
translation: MSSHKTFRIKRFLAKEQKQNHLIPQWIWMKTGNGIRSNSKIRHQSRMKPGL
SIO_010081: LOC117723536
subclass of: SO_0000673
so part of: LOC117723536
location: 6089526..6089681
location: region:6089526-6089681:1
so has part: feature:6089526-6089681:1:exon

XP_034379063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6089526-6089681:1:exon

LOC117723440
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6174376..6179078)
location: region:6174376-6179078:-1
so has part: feature:6174376-6179078:-1:exon

117723440
type: Gene
SIO_000068: ncbigene

position:6174376:-1
position: 6174376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6179078:-1
position: 6179078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6174376-6179078:-1:exon

LOC117723440
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723440
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC117723440
subclass of: SO_0000673
so part of: LOC117723440
location: complement(6174376..6174799)
location: region:6174376-6174799:-1
so has part: feature:6174376-6174799:-1:exon

position:6174799:-1
position: 6174799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6174376-6174799:-1:exon

LOC117723440
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723440
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC117723440
subclass of: SO_0000673
so part of: LOC117723440
location: complement(6179048..6179078)
location: region:6179048-6179078:-1
so has part: feature:6179048-6179078:-1:exon

position:6179048:-1
position: 6179048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6179048-6179078:-1:exon

Ttc29
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ttc29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6199495..6386932
location: region:6199495-6386932:1
so has part: feature:6199495-6386932:1:exon
subclass of: SO_0000010

117723369
type: Gene
SIO_000068: ncbigene

position:6199495:1
position: 6199495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6386932:1
position: 6386932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6199495-6386932:1:exon

Ttc29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ttc29
product: tetratricopeptide repeat domain 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_034522949.1
SIO_010081: Ttc29
subclass of: SO_0000673
so part of: Ttc29
location: join(6199495..6199586,6201416..6201499,6227683..6227906,6235114..6235299,6259707..6259919,6264943..6265028,6300255..6300346,6316916..6317039,6327435..6327663,6386144..6386210,6386914..6386932)
location: region:6199495-6386932:1
so has part: feature:6199495-6199586:1:exon
so has part: feature:6201416-6201499:1:exon
so has part: feature:6227683-6227906:1:exon
so has part: feature:6235114-6235299:1:exon
so has part: feature:6259707-6259919:1:exon
so has part: feature:6264943-6265028:1:exon
so has part: feature:6300255-6300346:1:exon
so has part: feature:6316916-6317039:1:exon
so has part: feature:6327435-6327663:1:exon
so has part: feature:6386144-6386210:1:exon
so has part: feature:6386914-6386932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6199495-6199586:1:exon

position:6199586:1
position: 6199586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6201416-6201499:1:exon

position:6201416:1
position: 6201416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6201499:1
position: 6201499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6227683-6227906:1:exon

position:6227683:1
position: 6227683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6227906:1
position: 6227906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6235114-6235299:1:exon

position:6235114:1
position: 6235114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6235299:1
position: 6235299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6259707-6259919:1:exon

position:6259707:1
position: 6259707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6259919:1
position: 6259919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6264943-6265028:1:exon

position:6264943:1
position: 6264943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6265028:1
position: 6265028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6300255-6300346:1:exon

position:6300255:1
position: 6300255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6300346:1
position: 6300346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6316916-6317039:1:exon

position:6316916:1
position: 6316916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6317039:1
position: 6317039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6327435-6327663:1:exon

position:6327435:1
position: 6327435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6327663:1
position: 6327663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6386144-6386210:1:exon

position:6386144:1
position: 6386144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6386210:1
position: 6386210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6386914-6386932:1:exon

position:6386914:1
position: 6386914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ttc29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ttc29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 29
translation: MAAFPPLPMTRTRLAILARQKLPCSSKAISRAQLIKEKDDIDYYLEQNFKGLSKEEVAAHRNSYKKSICVDMLRDGFHKSFTELFTLMQQWDKLREAAQARSLFWQQKPLEDQPDKLDSFYHYLTRAEAAERKAYYEEVYNNLYALACYFDNSEDKWVRNHFYERCFNIAQLIKVDGGKKEAEAEAHMGLLFEEEGELLKAAEHYEAFHELTQGRLWKDETGQFLNLVACESLVRTYRLLSDGMLENKDYKQAIKILIKASEIAREGNDRSMEGEASYYLGLAHLASGEYETALTVLDRYSEISTSLNDDLSLGRAYEAIAKVLQSQGETTEAIKYLEKFVIIARNNFQSLDVIQACTMLGDIYNEKGQYSKASEYFQQAFNTAMELLKMELMDETKVHFGIARAHQMMLTMKGYIESANTDSLNCLLSWKETRTQIEYDPILGESRRATEDNIYQFPDAQEETRRSPDNQ
SIO_010081: Ttc29
subclass of: SO_0000673
so part of: Ttc29
location: join(6199495..6199586,6201416..6201499,6227683..6227906,6235114..6235299,6259707..6259919,6264943..6265028,6300255..6300346,6316916..6317039,6327435..6327663,6386144..6386210,6386914..6386932)
location: region:6199495-6386932:1
so has part: feature:6199495-6199586:1:exon
so has part: feature:6201416-6201499:1:exon
so has part: feature:6227683-6227906:1:exon
so has part: feature:6235114-6235299:1:exon
so has part: feature:6259707-6259919:1:exon
so has part: feature:6264943-6265028:1:exon
so has part: feature:6300255-6300346:1:exon
so has part: feature:6316916-6317039:1:exon
so has part: feature:6327435-6327663:1:exon
so has part: feature:6386144-6386210:1:exon
so has part: feature:6386914-6386932:1:exon

XP_034378840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6199495-6199586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6201416-6201499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6227683-6227906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6235114-6235299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6259707-6259919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6264943-6265028:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6300255-6300346:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6316916-6317039:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6327435-6327663:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6386144-6386210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6386914-6386932:1:exon

Pou4f2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Pou4f2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6427515..6430939)
location: region:6427515-6430939:-1
so has part: feature:6427515-6430939:-1:exon
subclass of: SO_0000010

117723166
type: Gene
SIO_000068: ncbigene

position:6427515:-1
position: 6427515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6430939:-1
position: 6430939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6427515-6430939:-1:exon

Pou4f2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pou4f2
product: POU class 4 homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 11 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034522614.1
SIO_010081: Pou4f2
subclass of: SO_0000673
so part of: Pou4f2
location: complement(join(6427515..6429979,6430404..6430939))
location: region:6427515-6430939:-1
so has part: feature:6430404-6430939:-1:exon
so has part: feature:6427515-6429979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6430404-6430939:-1:exon

position:6430404:-1
position: 6430404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6427515-6429979:-1:exon

position:6429979:-1
position: 6429979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pou4f2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pou4f2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POU domain, class 4, transcription factor 2
translation: MMMMSLNSKQAFSMPHAGSLHVEPKYSALHSASPGSSAPAAPSASSPSSSSNAGGGGGGGGGGGGGGGGGRSSSSSSSGSGGGGGGGSEAMRRACLPTPPSNIFGGLDESLLARAEALAAVDIVSQSKSHHHHPPHHSPFKPDATYHTMNTIPCTSAASSSSVPISHPSALAGTHHHHHHHHHHHHQPHQALEGELLEHLSPGLALGAMAGPDGTVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMSDVDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAGI
SIO_010081: Pou4f2
subclass of: SO_0000673
so part of: Pou4f2
location: complement(join(6429038..6429979,6430404..6430703))
location: region:6429038-6430703:-1
so has part: feature:6430404-6430703:-1:exon
so has part: feature:6429038-6429979:-1:exon

XP_034378505.1
type: Protein
SIO_000068: ncbiprotein

position:6429038:-1
position: 6429038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6430703:-1
position: 6430703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6430404-6430703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6429038-6429979:-1:exon

LOC117723327
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6495211..6498879)
location: region:6495211-6498879:-1
so has part: feature:6495211-6498879:-1:exon
subclass of: SO_0000010

117723327
type: Gene
SIO_000068: ncbigene

position:6495211:-1
position: 6495211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6498879:-1
position: 6498879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6495211-6498879:-1:exon

LOC117723327
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723327
product: RNA binding motif protein, X-linked-like-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 mRNAs, 3 long SRA reads, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522875.1
SIO_010081: LOC117723327
subclass of: SO_0000673
so part of: LOC117723327
location: complement(join(6495211..6496755,6498755..6498879))
location: region:6495211-6498879:-1
so has part: feature:6498755-6498879:-1:exon
so has part: feature:6495211-6496755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6498755-6498879:-1:exon

position:6498755:-1
position: 6498755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6495211-6496755:-1:exon

position:6496755:-1
position: 6496755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117723327
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723327
product: RNA binding motif protein, X-linked-like-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 mRNAs, 3 long SRA reads, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522876.1
SIO_010081: LOC117723327
subclass of: SO_0000673
so part of: LOC117723327
location: complement(join(6495211..6496801,6498755..6498879))
location: region:6495211-6498879:-1
so has part: feature:6498755-6498879:-1:exon
so has part: feature:6495211-6496801:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6498755-6498879:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6495211-6496801:-1:exon

position:6496801:-1
position: 6496801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117723327
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA binding motif protein, X-linked-like-1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: LOC117723327
subclass of: SO_0000673
so part of: LOC117723327
location: complement(6495488..6496654)
location: region:6495488-6496654:-1
so has part: feature:6495488-6496654:-1:exon

XP_034378766.1
type: Protein
SIO_000068: ncbiprotein

position:6495488:-1
position: 6495488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6496654:-1
position: 6496654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6495488-6496654:-1:exon

LOC117723327
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA binding motif protein, X-linked-like-1
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGSGGTRGPPSRGGYMDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSTPSGPVRSSSGMGGRTPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYSHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: LOC117723327
subclass of: SO_0000673
so part of: LOC117723327
location: complement(6495488..6496654)
location: region:6495488-6496654:-1
so has part: feature:6495488-6496654:-1:exon

XP_034378767.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6495488-6496654:-1:exon

Slc10a7
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6499271..6709194
location: region:6499271-6709194:1
so has part: feature:6499271-6709194:1:exon
subclass of: SO_0000010

117723325
type: Gene
SIO_000068: ncbigene

position:6499271:1
position: 6499271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6709194:1
position: 6709194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6499271-6709194:1:exon

Slc10a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc10a7
product: solute carrier family 10 member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 2 long SRA reads, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522870.1
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499271..6499641,6505816..6505898,6515260..6515396,6521220..6521295,6566514..6566552,6642523..6642558,6662506..6662589,6672675..6672840,6673870..6673921,6682407..6682480,6704357..6704502,6707248..6709194)
location: region:6499271-6709194:1
so has part: feature:6499271-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6515260-6515396:1:exon
so has part: feature:6521220-6521295:1:exon
so has part: feature:6566514-6566552:1:exon
so has part: feature:6642523-6642558:1:exon
so has part: feature:6662506-6662589:1:exon
so has part: feature:6672675-6672840:1:exon
so has part: feature:6673870-6673921:1:exon
so has part: feature:6682407-6682480:1:exon
so has part: feature:6704357-6704502:1:exon
so has part: feature:6707248-6709194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6499271-6499641:1:exon

position:6499641:1
position: 6499641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

position:6505816:1
position: 6505816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6505898:1
position: 6505898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6515260-6515396:1:exon

position:6515260:1
position: 6515260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6515396:1
position: 6515396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6521220-6521295:1:exon

position:6521220:1
position: 6521220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6521295:1
position: 6521295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6566514-6566552:1:exon

position:6566514:1
position: 6566514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6566552:1
position: 6566552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6642523-6642558:1:exon

position:6642523:1
position: 6642523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6642558:1
position: 6642558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6662506-6662589:1:exon

position:6662506:1
position: 6662506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6662589:1
position: 6662589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6672675-6672840:1:exon

position:6672675:1
position: 6672675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6672840:1
position: 6672840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6673870-6673921:1:exon

position:6673870:1
position: 6673870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6673921:1
position: 6673921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6682407-6682480:1:exon

position:6682407:1
position: 6682407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6682480:1
position: 6682480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6704357-6704502:1:exon

position:6704357:1
position: 6704357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6704502:1
position: 6704502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6707248-6709194:1:exon

position:6707248:1
position: 6707248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc10a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc10a7
product: solute carrier family 10 member 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034522873.1
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499271..6499641,6505816..6505898,6515260..6515396,6521220..6521295,6566514..6566552,6642523..6642558,6672675..6672840,6673870..6673921,6682407..6682480,6704357..6704502,6707248..6709194)
location: region:6499271-6709194:1
so has part: feature:6499271-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6515260-6515396:1:exon
so has part: feature:6521220-6521295:1:exon
so has part: feature:6566514-6566552:1:exon
so has part: feature:6642523-6642558:1:exon
so has part: feature:6672675-6672840:1:exon
so has part: feature:6673870-6673921:1:exon
so has part: feature:6682407-6682480:1:exon
so has part: feature:6704357-6704502:1:exon
so has part: feature:6707248-6709194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6499271-6499641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6515260-6515396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6521220-6521295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6566514-6566552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6642523-6642558:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6672675-6672840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6673870-6673921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6682407-6682480:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6704357-6704502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6707248-6709194:1:exon

Slc10a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc10a7
product: solute carrier family 10 member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522871.1
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499271..6499641,6505816..6505898,6515260..6515396,6521220..6521295,6642523..6642558,6662506..6662589,6672675..6672840,6673870..6673921,6682407..6682480,6704357..6704502,6707248..6709194)
location: region:6499271-6709194:1
so has part: feature:6499271-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6515260-6515396:1:exon
so has part: feature:6521220-6521295:1:exon
so has part: feature:6642523-6642558:1:exon
so has part: feature:6662506-6662589:1:exon
so has part: feature:6672675-6672840:1:exon
so has part: feature:6673870-6673921:1:exon
so has part: feature:6682407-6682480:1:exon
so has part: feature:6704357-6704502:1:exon
so has part: feature:6707248-6709194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6499271-6499641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6515260-6515396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6521220-6521295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6642523-6642558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6662506-6662589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6672675-6672840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6673870-6673921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6682407-6682480:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6704357-6704502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6707248-6709194:1:exon

Slc10a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc10a7
product: solute carrier family 10 member 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034522872.1
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499271..6499641,6505816..6505898,6515260..6515396,6521220..6521295,6662506..6662589,6672675..6672840,6673870..6673921,6682407..6682480,6704357..6704502,6707248..6709194)
location: region:6499271-6709194:1
so has part: feature:6499271-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6515260-6515396:1:exon
so has part: feature:6521220-6521295:1:exon
so has part: feature:6662506-6662589:1:exon
so has part: feature:6672675-6672840:1:exon
so has part: feature:6673870-6673921:1:exon
so has part: feature:6682407-6682480:1:exon
so has part: feature:6704357-6704502:1:exon
so has part: feature:6707248-6709194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6499271-6499641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6515260-6515396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6521220-6521295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6662506-6662589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6672675-6672840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6673870-6673921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6682407-6682480:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6704357-6704502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6707248-6709194:1:exon

Slc10a7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc10a7
product: solute carrier family 10 member 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034522874.1
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499271..6499641,6505816..6505898,6521220..6521294)
location: region:6499271-6521294:1
so has part: feature:6499271-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6521220-6521294:1:exon

position:6521294:1
position: 6521294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6499271-6499641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6521220-6521294:1:exon

Slc10a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X1
translation: MRLLERVRKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSVTTINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVVTPVLLLLFLGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRYIKDWLERKKPPFGVVSSSVLLMIIYTTFCDTFSNPSIDLDKFSLVLILFIIVSVQLSFMLLTFIFSTRNNSGFTPADTVAIIFCSTHKSLTLGIPMLKIVFAGHEHLSLISVPLLIYHPAQILLGSVLVPTIKSWMVSRQKGVKLTRPTV
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499542..6499641,6505816..6505898,6515260..6515396,6521220..6521295,6566514..6566552,6642523..6642558,6662506..6662589,6672675..6672840,6673870..6673921,6682407..6682480,6704357..6704502,6707248..6707277)
location: region:6499542-6707277:1
so has part: feature:6499542-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6515260-6515396:1:exon
so has part: feature:6521220-6521295:1:exon
so has part: feature:6566514-6566552:1:exon
so has part: feature:6642523-6642558:1:exon
so has part: feature:6662506-6662589:1:exon
so has part: feature:6672675-6672840:1:exon
so has part: feature:6673870-6673921:1:exon
so has part: feature:6682407-6682480:1:exon
so has part: feature:6704357-6704502:1:exon
so has part: feature:6707248-6707277:1:exon

XP_034378761.1
type: Protein
SIO_000068: ncbiprotein

position:6499542:1
position: 6499542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6707277:1
position: 6707277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6499542-6499641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6515260-6515396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6521220-6521295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6566514-6566552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6642523-6642558:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6662506-6662589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6672675-6672840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6673870-6673921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6682407-6682480:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6704357-6704502:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6707248-6707277:1:exon

Slc10a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X4
translation: MRLLERVRKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSVTTINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEAAAIFNSAFGSFLGIVVTPVLLLLFIVRRYIKDWLERKKPPFGVVSSSVLLMIIYTTFCDTFSNPSIDLDKFSLVLILFIIVSVQLSFMLLTFIFSTRNNSGFTPADTVAIIFCSTHKSLTLGIPMLKIVFAGHEHLSLISVPLLIYHPAQILLGSVLVPTIKSWMVSRQKGVKLTRPTV
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499542..6499641,6505816..6505898,6515260..6515396,6521220..6521295,6566514..6566552,6642523..6642558,6672675..6672840,6673870..6673921,6682407..6682480,6704357..6704502,6707248..6707277)
location: region:6499542-6707277:1
so has part: feature:6499542-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6515260-6515396:1:exon
so has part: feature:6521220-6521295:1:exon
so has part: feature:6566514-6566552:1:exon
so has part: feature:6642523-6642558:1:exon
so has part: feature:6672675-6672840:1:exon
so has part: feature:6673870-6673921:1:exon
so has part: feature:6682407-6682480:1:exon
so has part: feature:6704357-6704502:1:exon
so has part: feature:6707248-6707277:1:exon

XP_034378764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6499542-6499641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6515260-6515396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6521220-6521295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6566514-6566552:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6642523-6642558:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6672675-6672840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6673870-6673921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6682407-6682480:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6704357-6704502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6707248-6707277:1:exon

Slc10a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X2
translation: MRLLERVRKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSVTTINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNEGIVVTPVLLLLFLGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRYIKDWLERKKPPFGVVSSSVLLMIIYTTFCDTFSNPSIDLDKFSLVLILFIIVSVQLSFMLLTFIFSTRNNSGFTPADTVAIIFCSTHKSLTLGIPMLKIVFAGHEHLSLISVPLLIYHPAQILLGSVLVPTIKSWMVSRQKGVKLTRPTV
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499542..6499641,6505816..6505898,6515260..6515396,6521220..6521295,6642523..6642558,6662506..6662589,6672675..6672840,6673870..6673921,6682407..6682480,6704357..6704502,6707248..6707277)
location: region:6499542-6707277:1
so has part: feature:6499542-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6515260-6515396:1:exon
so has part: feature:6521220-6521295:1:exon
so has part: feature:6642523-6642558:1:exon
so has part: feature:6662506-6662589:1:exon
so has part: feature:6672675-6672840:1:exon
so has part: feature:6673870-6673921:1:exon
so has part: feature:6682407-6682480:1:exon
so has part: feature:6704357-6704502:1:exon
so has part: feature:6707248-6707277:1:exon

XP_034378762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6499542-6499641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6515260-6515396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6521220-6521295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6642523-6642558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6662506-6662589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6672675-6672840:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6673870-6673921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6682407-6682480:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6704357-6704502:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6707248-6707277:1:exon

Slc10a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X3
translation: MRLLERVRKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEELTSALVHLKLHLFIQIFTLAFFPATIWLFLQLLSVTTINEWLLKGLQTVGCMPPPVSSAVILTKAVGGNELGSSSSVPFTSIFSQLFMTVVVPLIIGQIVRRYIKDWLERKKPPFGVVSSSVLLMIIYTTFCDTFSNPSIDLDKFSLVLILFIIVSVQLSFMLLTFIFSTRNNSGFTPADTVAIIFCSTHKSLTLGIPMLKIVFAGHEHLSLISVPLLIYHPAQILLGSVLVPTIKSWMVSRQKGVKLTRPTV
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499542..6499641,6505816..6505898,6515260..6515396,6521220..6521295,6662506..6662589,6672675..6672840,6673870..6673921,6682407..6682480,6704357..6704502,6707248..6707277)
location: region:6499542-6707277:1
so has part: feature:6499542-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6515260-6515396:1:exon
so has part: feature:6521220-6521295:1:exon
so has part: feature:6662506-6662589:1:exon
so has part: feature:6672675-6672840:1:exon
so has part: feature:6673870-6673921:1:exon
so has part: feature:6682407-6682480:1:exon
so has part: feature:6704357-6704502:1:exon
so has part: feature:6707248-6707277:1:exon

XP_034378763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6499542-6499641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6515260-6515396:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6521220-6521295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6662506-6662589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6672675-6672840:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6673870-6673921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6682407-6682480:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6704357-6704502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6707248-6707277:1:exon

Slc10a7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc10a7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/bile acid cotransporter 7 isoform X5
translation: MRLLERVRKEWFMVGIVVAIGAAKLEPSVGVNGGPLKPEITVSYIAVATIFFNSGLSLKTEFADSRLHASPCVFCCDFNQGSWRK
SIO_010081: Slc10a7
subclass of: SO_0000673
so part of: Slc10a7
location: join(6499542..6499641,6505816..6505898,6521220..6521294)
location: region:6499542-6521294:1
so has part: feature:6499542-6499641:1:exon
so has part: feature:6505816-6505898:1:exon
so has part: feature:6521220-6521294:1:exon

XP_034378765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6499542-6499641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6505816-6505898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6521220-6521294:1:exon

Reeld1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Reeld1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6731208..6751654)
location: region:6731208-6751654:-1
so has part: feature:6731208-6751654:-1:exon
subclass of: SO_0000010

117723441
type: Gene
SIO_000068: ncbigene

position:6731208:-1
position: 6731208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6751654:-1
position: 6751654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6731208-6751654:-1:exon

Reeld1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Reeld1
product: reeler domain containing 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034523058.1
SIO_010081: Reeld1
subclass of: SO_0000673
so part of: Reeld1
location: complement(join(6731208..6731575,6732500..6732555,6733032..6733166,6741387..6741500,6743197..6743401,6751493..6751654))
location: region:6731208-6751654:-1
so has part: feature:6751493-6751654:-1:exon
so has part: feature:6743197-6743401:-1:exon
so has part: feature:6741387-6741500:-1:exon
so has part: feature:6733032-6733166:-1:exon
so has part: feature:6732500-6732555:-1:exon
so has part: feature:6731208-6731575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6751493-6751654:-1:exon

position:6751493:-1
position: 6751493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6743197-6743401:-1:exon

position:6743197:-1
position: 6743197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6743401:-1
position: 6743401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6741387-6741500:-1:exon

position:6741387:-1
position: 6741387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6741500:-1
position: 6741500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6733032-6733166:-1:exon

position:6733032:-1
position: 6733032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6733166:-1
position: 6733166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6732500-6732555:-1:exon

position:6732500:-1
position: 6732500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6732555:-1
position: 6732555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6731208-6731575:-1:exon

position:6731575:-1
position: 6731575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Reeld1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Reeld1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(6743234..6743236),aa:OTHER)
product: LOW QUALITY PROTEIN: reelin domain-containing protein 1
translation: MCVKTLVSSDGSSHWSAPTEAHTGQLRRKLTLVSSDGSSPWQNEEKKCSDEQWQCLSKAVVALQALCCRHAQWLVTSLSSLHSKLMTCFEEADAATHSVNTPKRILLFIXKAPAQSVGTLDSSITKSYFVYWTRXELSVVSQQTHSGGPSVILCHMQPGSRNGQQLSGEINPSLQPSLDVYKLETLVILRKGTLDSVVSIPSTHHGTQNGLSFDSLETCLSSNKGTSGNQSDPSRASDSSLFEIQHREXEHGGGGMGYLNKTDLRPEVKPEGVSAPLVMQLRTPQLGILICLSVTLGVALASGLCYLYSQYCHSGQKGSFSEPAADDALARSDNGKVAYVRRTGDN
SIO_010081: Reeld1
subclass of: SO_0000673
so part of: Reeld1
location: complement(join(6731208..6731575,6732500..6732555,6733032..6733166,6741387..6741500,6743197..6743401,6751493..6751654))
location: region:6731208-6751654:-1
so has part: feature:6751493-6751654:-1:exon
so has part: feature:6743197-6743401:-1:exon
so has part: feature:6741387-6741500:-1:exon
so has part: feature:6733032-6733166:-1:exon
so has part: feature:6732500-6732555:-1:exon
so has part: feature:6731208-6731575:-1:exon

XP_034378949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6751493-6751654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6743197-6743401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6741387-6741500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6733032-6733166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6732500-6732555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6731208-6731575:-1:exon

Lsm6
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Lsm6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6778464..6790832)
location: region:6778464-6790832:-1
so has part: feature:6778464-6790832:-1:exon
subclass of: SO_0000010

117722915
type: Gene
SIO_000068: ncbigene

position:6778464:-1
position: 6778464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6790832:-1
position: 6790832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6778464-6790832:-1:exon

Lsm6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lsm6
product: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522198.1
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(6778464..6778630,6780319..6780432,6783311..6783416,6790752..6790832))
location: region:6778464-6790832:-1
so has part: feature:6790752-6790832:-1:exon
so has part: feature:6783311-6783416:-1:exon
so has part: feature:6780319-6780432:-1:exon
so has part: feature:6778464-6778630:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6790752-6790832:-1:exon

position:6790752:-1
position: 6790752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6783311-6783416:-1:exon

position:6783311:-1
position: 6783311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6783416:-1
position: 6783416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6780319-6780432:-1:exon

position:6780319:-1
position: 6780319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6780432:-1
position: 6780432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6778464-6778630:-1:exon

position:6778630:-1
position: 6778630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lsm6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lsm6
product: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522197.1
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(6778464..6778630,6780319..6780432,6783311..6783416,6789813..6789914,6790752..6790807))
location: region:6778464-6790807:-1
so has part: feature:6790752-6790807:-1:exon
so has part: feature:6789813-6789914:-1:exon
so has part: feature:6783311-6783416:-1:exon
so has part: feature:6780319-6780432:-1:exon
so has part: feature:6778464-6778630:-1:exon

position:6790807:-1
position: 6790807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6790752-6790807:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6789813-6789914:-1:exon

position:6789813:-1
position: 6789813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6789914:-1
position: 6789914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6783311-6783416:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6780319-6780432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6778464-6778630:-1:exon

Lsm6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lsm6
product: LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034522199.1
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(6778464..6778630,6780319..6780432,6783311..6783416,6789894..6789914,6790752..6790786))
location: region:6778464-6790786:-1
so has part: feature:6790752-6790786:-1:exon
so has part: feature:6789894-6789914:-1:exon
so has part: feature:6783311-6783416:-1:exon
so has part: feature:6780319-6780432:-1:exon
so has part: feature:6778464-6778630:-1:exon

position:6790786:-1
position: 6790786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6790752-6790786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6789894-6789914:-1:exon

position:6789894:-1
position: 6789894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6783311-6783416:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6780319-6780432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6778464-6778630:-1:exon

Lsm6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lsm6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm6
translation: MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(6778596..6778630,6780319..6780432,6783311..6783404))
location: region:6778596-6783404:-1
so has part: feature:6783311-6783404:-1:exon
so has part: feature:6780319-6780432:-1:exon
so has part: feature:6778596-6778630:-1:exon

XP_034378088.1
type: Protein
SIO_000068: ncbiprotein

position:6778596:-1
position: 6778596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6783404:-1
position: 6783404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6783311-6783404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6780319-6780432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6778596-6778630:-1:exon

Lsm6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lsm6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm6
translation: MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(6778596..6778630,6780319..6780432,6783311..6783404))
location: region:6778596-6783404:-1
so has part: feature:6783311-6783404:-1:exon
so has part: feature:6780319-6780432:-1:exon
so has part: feature:6778596-6778630:-1:exon

XP_034378089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6783311-6783404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6780319-6780432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6778596-6778630:-1:exon

Lsm6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lsm6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm6
translation: MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRRM
SIO_010081: Lsm6
subclass of: SO_0000673
so part of: Lsm6
location: complement(join(6778596..6778630,6780319..6780432,6783311..6783404))
location: region:6778596-6783404:-1
so has part: feature:6783311-6783404:-1:exon
so has part: feature:6780319-6780432:-1:exon
so has part: feature:6778596-6778630:-1:exon

XP_034378090.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6783311-6783404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6780319-6780432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6778596-6778630:-1:exon

LOC117723442
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723442
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6953673..6954849)
location: region:6953673-6954849:-1
so has part: feature:6953673-6954849:-1:exon

117723442
type: Gene
SIO_000068: ncbigene

position:6953673:-1
position: 6953673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6954849:-1
position: 6954849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6953673-6954849:-1:exon

LOC117723442
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723442
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC117723442
subclass of: SO_0000673
so part of: LOC117723442
location: complement(6953673..6953678)
location: region:6953673-6953678:-1
so has part: feature:6953673-6953678:-1:exon

position:6953678:-1
position: 6953678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6953673-6953678:-1:exon

LOC117723442
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723442
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
pseudo: true
SIO_010081: LOC117723442
subclass of: SO_0000673
so part of: LOC117723442
location: complement(6953870..6954849)
location: region:6953870-6954849:-1
so has part: feature:6953870-6954849:-1:exon

position:6953870:-1
position: 6953870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6953870-6954849:-1:exon

Znf827
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6995650..7159601
location: region:6995650-7159601:1
so has part: feature:6995650-7159601:1:exon
subclass of: SO_0000010

117723135
type: Gene
SIO_000068: ncbigene

position:6995650:1
position: 6995650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7159601:1
position: 7159601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6995650-7159601:1:exon

Znf827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf827
product: zinc finger protein 827, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522569.1
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6995650..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147578..7147767,7148748..7148914,7154347..7154538,7154867..7155044,7158309..7159601)
location: region:6995650-7159601:1
so has part: feature:6995650-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147578-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155044:1:exon
so has part: feature:7158309-7159601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6995650-6996149:1:exon

position:6996149:1
position: 6996149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

position:7030200:1
position: 7030200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7031237:1
position: 7031237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

position:7039662:1
position: 7039662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7039834:1
position: 7039834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

position:7045220:1
position: 7045220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7045700:1
position: 7045700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

position:7060672:1
position: 7060672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7060905:1
position: 7060905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

position:7085552:1
position: 7085552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7085791:1
position: 7085791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

position:7087805:1
position: 7087805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7087862:1
position: 7087862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

position:7106024:1
position: 7106024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7106127:1
position: 7106127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

position:7144380:1
position: 7144380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7144517:1
position: 7144517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7147578-7147767:1:exon

position:7147578:1
position: 7147578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7147767:1
position: 7147767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

position:7148748:1
position: 7148748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7148914:1
position: 7148914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

position:7154347:1
position: 7154347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7154538:1
position: 7154538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155044:1:exon

position:7154867:1
position: 7154867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7155044:1
position: 7155044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7158309-7159601:1:exon

position:7158309:1
position: 7158309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Znf827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf827
product: zinc finger protein 827, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522571.1
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6995650..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147578..7147767,7148748..7148914,7154347..7154538,7154867..7155044,7156783..7156815,7158309..7159163)
location: region:6995650-7159163:1
so has part: feature:6995650-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147578-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155044:1:exon
so has part: feature:7156783-7156815:1:exon
so has part: feature:7158309-7159163:1:exon

position:7159163:1
position: 7159163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6995650-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147578-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7156783-7156815:1:exon

position:7156783:1
position: 7156783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7156815:1
position: 7156815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7158309-7159163:1:exon

Znf827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf827
product: zinc finger protein 827, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 1 long SRA read, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522573.1
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6995650..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147596..7147767,7148748..7148914,7154347..7154538,7154867..7155044,7156783..7156815,7158309..7159163)
location: region:6995650-7159163:1
so has part: feature:6995650-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147596-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155044:1:exon
so has part: feature:7156783-7156815:1:exon
so has part: feature:7158309-7159163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6995650-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147596-7147767:1:exon

position:7147596:1
position: 7147596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7156783-7156815:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7158309-7159163:1:exon

Znf827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf827
product: zinc finger protein 827, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522570.1
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6995650..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147596..7147767,7148748..7148914,7154347..7154538,7154867..7155044,7158309..7159163)
location: region:6995650-7159163:1
so has part: feature:6995650-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147596-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155044:1:exon
so has part: feature:7158309-7159163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6995650-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147596-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7158309-7159163:1:exon

Znf827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf827
product: zinc finger protein 827, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522572.1
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6995650..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147578..7147767,7148748..7148914,7154347..7154538,7154867..7155057,7156783..7156810)
location: region:6995650-7156810:1
so has part: feature:6995650-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147578-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155057:1:exon
so has part: feature:7156783-7156810:1:exon

position:7156810:1
position: 7156810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6995650-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147578-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155057:1:exon

position:7155057:1
position: 7155057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7156783-7156810:1:exon

Znf827
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf827
product: zinc finger protein 827, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522574.1
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6995650..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147596..7147767,7148748..7148914,7154347..7154538,7154867..7155057,7156783..7156810)
location: region:6995650-7156810:1
so has part: feature:6995650-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147596-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155057:1:exon
so has part: feature:7156783-7156810:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6995650-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147596-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7156783-7156810:1:exon

Znf827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X1
translation: MPRRKQEQPKRLPSHVSRQAEAEGDSSEGEQWYGNSSETPSEASYGEVQENYKLSLEDRIQEQSTSPDTSLGSATPSSHTLELVALDGEVLRDSLQCQGHLSPGVSSVCDDDPPSSNKPLSSNLRRLLEAGSLKLDGTANGRVESPVNVGPSLSFSPPSHHAQQLSVLARKLAEKQDQSDQYTPSNRFIWNQGKWLPNSTTTCGLSPDSAILKLKAAANAVLQDKSLSRTEESLRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGSLLAEKSSLLPDDPLPLPPSEKKPEKVTPPPPPPPPPAQPQSLELLLLPVSKGRVSKPSNSAPEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTGQGGAGVAPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVSNSAAALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPKEEESLSMPLPRSSYVFSPEPEVSTPSISEDPLTPQEGKGNVLRRDMSAKAASELLMKLSAESYKETQAVTVKEEPMEVDIQDSPASISPSRNVGYSTLMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENAMRTTTSPFFSEDTFRQSPFTSNSKDLLPGESVLHGRVSAPETEKIILEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTVLVSPPEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGGDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEIKNHIGTKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKNKGGNNLLVISVVPGSQPSLNNEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLKCPFCIYSTNRPAAMECHLKTHYKMEYKCRICQTVKANQLELETHTREHRLGNHYKCDQCGYLSKTANKLIEHVRVHTGERPFHCDQCSYSCKRKDNLNLHKKLKHAPRQTFSCGECLFKTTHPFVFSRHVKKHQSGDGPEEDKKGLSPASREPAGPGAPLLVVGGGRSLLSPLSVMSASQALQTVALSAAHGSSSEPNLALKALAFSGSPLHLDKYRNSDVAHLIPLTMLYPRNHLDLTFHPPRPQTAPPSIPSPKHSFLAYLGLRERAETV
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6996107..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147578..7147767,7148748..7148914,7154347..7154538,7154867..7155044,7158309..7159128)
location: region:6996107-7159128:1
so has part: feature:6996107-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147578-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155044:1:exon
so has part: feature:7158309-7159128:1:exon

XP_034378460.1
type: Protein
SIO_000068: ncbiprotein

position:6996107:1
position: 6996107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7159128:1
position: 7159128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6996107-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147578-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7158309-7159128:1:exon

Znf827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X2
translation: MPRRKQEQPKRLPSHVSRQAEAEGDSSEGEQWYGNSSETPSEASYGEVQENYKLSLEDRIQEQSTSPDTSLGSATPSSHTLELVALDGEVLRDSLQCQGHLSPGVSSVCDDDPPSSNKPLSSNLRRLLEAGSLKLDGTANGRVESPVNVGPSLSFSPPSHHAQQLSVLARKLAEKQDQSDQYTPSNRFIWNQGKWLPNSTTTCGLSPDSAILKLKAAANAVLQDKSLSRTEESLRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGSLLAEKSSLLPDDPLPLPPSEKKPEKVTPPPPPPPPPAQPQSLELLLLPVSKGRVSKPSNSAPEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTGQGGAGVAPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVSNSAAALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPKEEESLSMPLPRSSYVFSPEPEVSTPSISEDPLTPQEGKGNVLRRDMSAKAASELLMKLSAESYKETQAVTVKEEPMEVDIQDSPASISPSRNVGYSTLMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENAMRTTTSPFFSEDTFRQSPFTSNSKDLLPGESVLHGRVSAPETEKIILEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGGDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEIKNHIGTKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKNKGGNNLLVISVVPGSQPSLNNEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLKCPFCIYSTNRPAAMECHLKTHYKMEYKCRICQTVKANQLELETHTREHRLGNHYKCDQCGYLSKTANKLIEHVRVHTGERPFHCDQCSYSCKRKDNLNLHKKLKHAPRQTFSCGECLFKTTHPFVFSRHVKKHQSGDGPEEDKKGLSPASREPAGPGAPLLVVGGGRSLLSPLSVMSASQALQTVALSAAHGSSSEPNLALKALAFSGSPLHLDKYRNSDVAHLIPLTMLYPRNHLDLTFHPPRPQTAPPSIPSPKHSFLAYLGLRERAETV
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6996107..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147596..7147767,7148748..7148914,7154347..7154538,7154867..7155044,7158309..7159128)
location: region:6996107-7159128:1
so has part: feature:6996107-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147596-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155044:1:exon
so has part: feature:7158309-7159128:1:exon

XP_034378461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6996107-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147596-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7158309-7159128:1:exon

Znf827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X3
translation: MPRRKQEQPKRLPSHVSRQAEAEGDSSEGEQWYGNSSETPSEASYGEVQENYKLSLEDRIQEQSTSPDTSLGSATPSSHTLELVALDGEVLRDSLQCQGHLSPGVSSVCDDDPPSSNKPLSSNLRRLLEAGSLKLDGTANGRVESPVNVGPSLSFSPPSHHAQQLSVLARKLAEKQDQSDQYTPSNRFIWNQGKWLPNSTTTCGLSPDSAILKLKAAANAVLQDKSLSRTEESLRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGSLLAEKSSLLPDDPLPLPPSEKKPEKVTPPPPPPPPPAQPQSLELLLLPVSKGRVSKPSNSAPEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTGQGGAGVAPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVSNSAAALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPKEEESLSMPLPRSSYVFSPEPEVSTPSISEDPLTPQEGKGNVLRRDMSAKAASELLMKLSAESYKETQAVTVKEEPMEVDIQDSPASISPSRNVGYSTLMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENAMRTTTSPFFSEDTFRQSPFTSNSKDLLPGESVLHGRVSAPETEKIILEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTVLVSPPEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGGDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEIKNHIGTKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKNKGGNNLLVISVVPGSQPSLNNEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLNSGQW
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6996107..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147578..7147767,7148748..7148914,7154347..7154538,7154867..7155044,7156783..7156798)
location: region:6996107-7156798:1
so has part: feature:6996107-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147578-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155044:1:exon
so has part: feature:7156783-7156798:1:exon

XP_034378462.1
type: Protein
SIO_000068: ncbiprotein

position:7156798:1
position: 7156798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6996107-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147578-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7156783-7156798:1:exon

Znf827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X5
translation: MPRRKQEQPKRLPSHVSRQAEAEGDSSEGEQWYGNSSETPSEASYGEVQENYKLSLEDRIQEQSTSPDTSLGSATPSSHTLELVALDGEVLRDSLQCQGHLSPGVSSVCDDDPPSSNKPLSSNLRRLLEAGSLKLDGTANGRVESPVNVGPSLSFSPPSHHAQQLSVLARKLAEKQDQSDQYTPSNRFIWNQGKWLPNSTTTCGLSPDSAILKLKAAANAVLQDKSLSRTEESLRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGSLLAEKSSLLPDDPLPLPPSEKKPEKVTPPPPPPPPPAQPQSLELLLLPVSKGRVSKPSNSAPEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTGQGGAGVAPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVSNSAAALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPKEEESLSMPLPRSSYVFSPEPEVSTPSISEDPLTPQEGKGNVLRRDMSAKAASELLMKLSAESYKETQAVTVKEEPMEVDIQDSPASISPSRNVGYSTLMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENAMRTTTSPFFSEDTFRQSPFTSNSKDLLPGESVLHGRVSAPETEKIILEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGGDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEIKNHIGTKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKNKGGNNLLVISVVPGSQPSLNNEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLNSGQW
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6996107..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147596..7147767,7148748..7148914,7154347..7154538,7154867..7155044,7156783..7156798)
location: region:6996107-7156798:1
so has part: feature:6996107-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147596-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155044:1:exon
so has part: feature:7156783-7156798:1:exon

XP_034378464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6996107-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147596-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7156783-7156798:1:exon

Znf827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X4
translation: MPRRKQEQPKRLPSHVSRQAEAEGDSSEGEQWYGNSSETPSEASYGEVQENYKLSLEDRIQEQSTSPDTSLGSATPSSHTLELVALDGEVLRDSLQCQGHLSPGVSSVCDDDPPSSNKPLSSNLRRLLEAGSLKLDGTANGRVESPVNVGPSLSFSPPSHHAQQLSVLARKLAEKQDQSDQYTPSNRFIWNQGKWLPNSTTTCGLSPDSAILKLKAAANAVLQDKSLSRTEESLRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGSLLAEKSSLLPDDPLPLPPSEKKPEKVTPPPPPPPPPAQPQSLELLLLPVSKGRVSKPSNSAPEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTGQGGAGVAPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVSNSAAALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPKEEESLSMPLPRSSYVFSPEPEVSTPSISEDPLTPQEGKGNVLRRDMSAKAASELLMKLSAESYKETQAVTVKEEPMEVDIQDSPASISPSRNVGYSTLMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENAMRTTTSPFFSEDTFRQSPFTSNSKDLLPGESVLHGRVSAPETEKIILEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTVLVSPPEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGGDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEIKNHIGTKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKNKGGNNLLVISVVPGSQPSLNNEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLK
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6996107..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147578..7147767,7148748..7148914,7154347..7154538,7154867..7155048)
location: region:6996107-7155048:1
so has part: feature:6996107-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147578-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155048:1:exon

XP_034378463.1
type: Protein
SIO_000068: ncbiprotein

position:7155048:1
position: 7155048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6996107-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147578-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155048:1:exon

Znf827
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 827 isoform X6
translation: MPRRKQEQPKRLPSHVSRQAEAEGDSSEGEQWYGNSSETPSEASYGEVQENYKLSLEDRIQEQSTSPDTSLGSATPSSHTLELVALDGEVLRDSLQCQGHLSPGVSSVCDDDPPSSNKPLSSNLRRLLEAGSLKLDGTANGRVESPVNVGPSLSFSPPSHHAQQLSVLARKLAEKQDQSDQYTPSNRFIWNQGKWLPNSTTTCGLSPDSAILKLKAAANAVLQDKSLSRTEESLRFESFSSPFSSQSASSTLAALSKKVSERSLTPGQEHPPPASSFLSLASMTSSAALLKEVAARAAGSLLAEKSSLLPDDPLPLPPSEKKPEKVTPPPPPPPPPAQPQSLELLLLPVSKGRVSKPSNSAPEEESGKPFQCPICGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQHQDRGETFQCQLCPFTSSRHFSLKLHMRCHQHFLRTEAKVKEEIPDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTGQGGAGVAPLLVKEEPKEDNGLPTSFTLNAADRPANHTKLKDPSEYVSNSAAALFSQDISVKMASDFLMKLSAANQKEPMNLNFKVKEEPKEEESLSMPLPRSSYVFSPEPEVSTPSISEDPLTPQEGKGNVLRRDMSAKAASELLMKLSAESYKETQAVTVKEEPMEVDIQDSPASISPSRNVGYSTLMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENAMRTTTSPFFSEDTFRQSPFTSNSKDLLPGESVLHGRVSAPETEKIILEAGNGLPSWKFNDQLFPCDVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVTSEGGDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEIKNHIGTKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKNKGGNNLLVISVVPGSQPSLNNEEKPEKGFECVFCNFVCKTKNMFERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPTGGLK
SIO_010081: Znf827
subclass of: SO_0000673
so part of: Znf827
location: join(6996107..6996149,7030200..7031237,7039662..7039834,7045220..7045700,7060672..7060905,7085552..7085791,7087805..7087862,7106024..7106127,7144380..7144517,7147596..7147767,7148748..7148914,7154347..7154538,7154867..7155048)
location: region:6996107-7155048:1
so has part: feature:6996107-6996149:1:exon
so has part: feature:7030200-7031237:1:exon
so has part: feature:7039662-7039834:1:exon
so has part: feature:7045220-7045700:1:exon
so has part: feature:7060672-7060905:1:exon
so has part: feature:7085552-7085791:1:exon
so has part: feature:7087805-7087862:1:exon
so has part: feature:7106024-7106127:1:exon
so has part: feature:7144380-7144517:1:exon
so has part: feature:7147596-7147767:1:exon
so has part: feature:7148748-7148914:1:exon
so has part: feature:7154347-7154538:1:exon
so has part: feature:7154867-7155048:1:exon

XP_034378465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6996107-6996149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7030200-7031237:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7039662-7039834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7045220-7045700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7060672-7060905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7085552-7085791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7087805-7087862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7106024-7106127:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7144380-7144517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7147596-7147767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7148748-7148914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7154347-7154538:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7154867-7155048:1:exon

C18H4orf51
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: C18H4orf51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7179809..7210936)
location: region:7179809-7210936:-1
so has part: feature:7179809-7210936:-1:exon
subclass of: SO_0000010

117723136
type: Gene
SIO_000068: ncbigene

position:7179809:-1
position: 7179809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7210936:-1
position: 7210936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7179809-7210936:-1:exon

C18H4orf51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C18H4orf51
product: chromosome 18 C4orf51 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034522576.1
SIO_010081: C18H4orf51
subclass of: SO_0000673
so part of: C18H4orf51
location: complement(join(7179809..7180129,7183015..7183088,7183925..7183997,7186192..7186253,7196728..7196804,7210573..7210936))
location: region:7179809-7210936:-1
so has part: feature:7210573-7210936:-1:exon
so has part: feature:7196728-7196804:-1:exon
so has part: feature:7186192-7186253:-1:exon
so has part: feature:7183925-7183997:-1:exon
so has part: feature:7183015-7183088:-1:exon
so has part: feature:7179809-7180129:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7210573-7210936:-1:exon

position:7210573:-1
position: 7210573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7196728-7196804:-1:exon

position:7196728:-1
position: 7196728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7196804:-1
position: 7196804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7186192-7186253:-1:exon

position:7186192:-1
position: 7186192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7186253:-1
position: 7186253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7183925-7183997:-1:exon

position:7183925:-1
position: 7183925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7183997:-1
position: 7183997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7183015-7183088:-1:exon

position:7183015:-1
position: 7183015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7183088:-1
position: 7183088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7179809-7180129:-1:exon

position:7180129:-1
position: 7180129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C18H4orf51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C18H4orf51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C4orf51 homolog
translation: MTHFLYLAPEILLPFSPLSSTEFELIRRKSRELWQDERRWSASSVTTYSGSYRKKQLDEATCNRLAQRVGQPQFEYKPTPLPGNSAYNRLPGKAGSQEATDGKGKLPDITSPSQDSSLNIKHKVAHQVWGSEAPCPSFLAYRSPRMSPCMRPKKPGFELLMSYRNRGKNLLKQLQRQWDYENKFASSEDSETDRFSSNTSGSPGRKFK
SIO_010081: C18H4orf51
subclass of: SO_0000673
so part of: C18H4orf51
location: complement(join(7180022..7180129,7183015..7183088,7183925..7183997,7186192..7186253,7196728..7196804,7210573..7210805))
location: region:7180022-7210805:-1
so has part: feature:7210573-7210805:-1:exon
so has part: feature:7196728-7196804:-1:exon
so has part: feature:7186192-7186253:-1:exon
so has part: feature:7183925-7183997:-1:exon
so has part: feature:7183015-7183088:-1:exon
so has part: feature:7180022-7180129:-1:exon

XP_034378467.1
type: Protein
SIO_000068: ncbiprotein

position:7180022:-1
position: 7180022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7210805:-1
position: 7210805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7210573-7210805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7196728-7196804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7186192-7186253:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7183925-7183997:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7183015-7183088:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7180022-7180129:-1:exon

Mmaa
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7229634..7263259)
location: region:7229634-7263259:-1
so has part: feature:7229634-7263259:-1:exon
subclass of: SO_0000010

117722863
type: Gene
SIO_000068: ncbigene

position:7229634:-1
position: 7229634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7263259:-1
position: 7263259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7229634-7263259:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034522113.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(7229634..7229943,7230613..7230762,7232344..7232429,7235682..7235852,7238835..7238957,7241567..7242021,7263220..7263259))
location: region:7229634-7263259:-1
so has part: feature:7263220-7263259:-1:exon
so has part: feature:7241567-7242021:-1:exon
so has part: feature:7238835-7238957:-1:exon
so has part: feature:7235682-7235852:-1:exon
so has part: feature:7232344-7232429:-1:exon
so has part: feature:7230613-7230762:-1:exon
so has part: feature:7229634-7229943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7263220-7263259:-1:exon

position:7263220:-1
position: 7263220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7241567-7242021:-1:exon

position:7241567:-1
position: 7241567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7242021:-1
position: 7242021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7238835-7238957:-1:exon

position:7238835:-1
position: 7238835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7238957:-1
position: 7238957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7235682-7235852:-1:exon

position:7235682:-1
position: 7235682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7235852:-1
position: 7235852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7232344-7232429:-1:exon

position:7232344:-1
position: 7232344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7232429:-1
position: 7232429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7230613-7230762:-1:exon

position:7230613:-1
position: 7230613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7230762:-1
position: 7230762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7229634-7229943:-1:exon

position:7229943:-1
position: 7229943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034522114.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(7229634..7229943,7230613..7230762,7232344..7232429,7235682..7235852,7238835..7238957,7241567..7242021,7242969..7243112))
location: region:7229634-7243112:-1
so has part: feature:7242969-7243112:-1:exon
so has part: feature:7241567-7242021:-1:exon
so has part: feature:7238835-7238957:-1:exon
so has part: feature:7235682-7235852:-1:exon
so has part: feature:7232344-7232429:-1:exon
so has part: feature:7230613-7230762:-1:exon
so has part: feature:7229634-7229943:-1:exon

position:7243112:-1
position: 7243112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7242969-7243112:-1:exon

position:7242969:-1
position: 7242969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7241567-7242021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7238835-7238957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7235682-7235852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7232344-7232429:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7230613-7230762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7229634-7229943:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034522115.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(7229634..7229943,7230613..7230762,7232344..7232429,7235682..7235852,7238835..7238957,7241567..7242021,7243040..7243054))
location: region:7229634-7243054:-1
so has part: feature:7243040-7243054:-1:exon
so has part: feature:7241567-7242021:-1:exon
so has part: feature:7238835-7238957:-1:exon
so has part: feature:7235682-7235852:-1:exon
so has part: feature:7232344-7232429:-1:exon
so has part: feature:7230613-7230762:-1:exon
so has part: feature:7229634-7229943:-1:exon

position:7243054:-1
position: 7243054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7243040-7243054:-1:exon

position:7243040:-1
position: 7243040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7241567-7242021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7238835-7238957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7235682-7235852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7232344-7232429:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7230613-7230762:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7229634-7229943:-1:exon

Mmaa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mmaa
product: metabolism of cobalamin associated A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522116.1
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(7229634..7229943,7230613..7230762,7232344..7232429,7235682..7235852,7238835..7238957,7241571..7241641))
location: region:7229634-7241641:-1
so has part: feature:7241571-7241641:-1:exon
so has part: feature:7238835-7238957:-1:exon
so has part: feature:7235682-7235852:-1:exon
so has part: feature:7232344-7232429:-1:exon
so has part: feature:7230613-7230762:-1:exon
so has part: feature:7229634-7229943:-1:exon

position:7241641:-1
position: 7241641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7241571-7241641:-1:exon

position:7241571:-1
position: 7241571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7238835-7238957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7235682-7235852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7232344-7232429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7230613-7230762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7229634-7229943:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTIPMLQLSPYRHLLARLSRVHSPRLRHSHHPAPGSPGALPNSSGHHCTKRVLLSDAFRRTLCVQATLKDHTEGLSDKEQRFVDRLYMGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELQNQGKPLTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRSRSEVWRPKVIRISAKSGEGITEMWDMMREFQHRMLASGELAAKRQTQHKVWMWNLIQENVLEYFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(7229656..7229943,7230613..7230762,7232344..7232429,7235682..7235852,7238835..7238957,7241567..7241996))
location: region:7229656-7241996:-1
so has part: feature:7241567-7241996:-1:exon
so has part: feature:7238835-7238957:-1:exon
so has part: feature:7235682-7235852:-1:exon
so has part: feature:7232344-7232429:-1:exon
so has part: feature:7230613-7230762:-1:exon
so has part: feature:7229656-7229943:-1:exon

XP_034378004.1
type: Protein
SIO_000068: ncbiprotein

position:7229656:-1
position: 7229656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7241996:-1
position: 7241996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7241567-7241996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7238835-7238957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7235682-7235852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7232344-7232429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7230613-7230762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7229656-7229943:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTIPMLQLSPYRHLLARLSRVHSPRLRHSHHPAPGSPGALPNSSGHHCTKRVLLSDAFRRTLCVQATLKDHTEGLSDKEQRFVDRLYMGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELQNQGKPLTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRSRSEVWRPKVIRISAKSGEGITEMWDMMREFQHRMLASGELAAKRQTQHKVWMWNLIQENVLEYFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(7229656..7229943,7230613..7230762,7232344..7232429,7235682..7235852,7238835..7238957,7241567..7241996))
location: region:7229656-7241996:-1
so has part: feature:7241567-7241996:-1:exon
so has part: feature:7238835-7238957:-1:exon
so has part: feature:7235682-7235852:-1:exon
so has part: feature:7232344-7232429:-1:exon
so has part: feature:7230613-7230762:-1:exon
so has part: feature:7229656-7229943:-1:exon

XP_034378005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7241567-7241996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7238835-7238957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7235682-7235852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7232344-7232429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7230613-7230762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7229656-7229943:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X1
translation: MTIPMLQLSPYRHLLARLSRVHSPRLRHSHHPAPGSPGALPNSSGHHCTKRVLLSDAFRRTLCVQATLKDHTEGLSDKEQRFVDRLYMGLVQGQRACLAEAITLVESTHTRKKELAQVLLQRVLAHQREQELQNQGKPLTFRVGLSGPPGAGKSTFIECFGKMLTEQGHRLSVLAVDPSSCTSGGSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRSRSEVWRPKVIRISAKSGEGITEMWDMMREFQHRMLASGELAAKRQTQHKVWMWNLIQENVLEYFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(7229656..7229943,7230613..7230762,7232344..7232429,7235682..7235852,7238835..7238957,7241567..7241996))
location: region:7229656-7241996:-1
so has part: feature:7241567-7241996:-1:exon
so has part: feature:7238835-7238957:-1:exon
so has part: feature:7235682-7235852:-1:exon
so has part: feature:7232344-7232429:-1:exon
so has part: feature:7230613-7230762:-1:exon
so has part: feature:7229656-7229943:-1:exon

XP_034378006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7241567-7241996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7238835-7238957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7235682-7235852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7232344-7232429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7230613-7230762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7229656-7229943:-1:exon

Mmaa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mmaa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methylmalonic aciduria type A protein, mitochondrial isoform X2
translation: MLTEQGHRLSVLAVDPSSCTSGGSLLGDKTRMIELSRDMNAYIRPSPTSGTLGGVTRTTNEAIVLCEGGGYDIILIETVGVGQSEFAVADMVDMFVLLLPPAGGDELQGIKRGIIEMADLVVITKSDGDLVVPARRIQAEYVSALKLLRSRSEVWRPKVIRISAKSGEGITEMWDMMREFQHRMLASGELAAKRQTQHKVWMWNLIQENVLEYFKTHPSIREQIPLMEREVLSGALSPGRAADLLLKAFKSRH
SIO_010081: Mmaa
subclass of: SO_0000673
so part of: Mmaa
location: complement(join(7229656..7229943,7230613..7230762,7232344..7232429,7235682..7235852,7238835..7238901))
location: region:7229656-7238901:-1
so has part: feature:7238835-7238901:-1:exon
so has part: feature:7235682-7235852:-1:exon
so has part: feature:7232344-7232429:-1:exon
so has part: feature:7230613-7230762:-1:exon
so has part: feature:7229656-7229943:-1:exon

XP_034378007.1
type: Protein
SIO_000068: ncbiprotein

position:7238901:-1
position: 7238901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7238835-7238901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7235682-7235852:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7232344-7232429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7230613-7230762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7229656-7229943:-1:exon

LOC117723443
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7266137..7270354)
location: region:7266137-7270354:-1
so has part: feature:7266137-7270354:-1:exon
subclass of: SO_0000010

117723443
type: Gene
SIO_000068: ncbigene

position:7266137:-1
position: 7266137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7270354:-1
position: 7270354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7266137-7270354:-1:exon

LOC117723443
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723443
product: DNA-directed RNA polymerases I, II, and III subunit RPABC4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523059.1
SIO_010081: LOC117723443
subclass of: SO_0000673
so part of: LOC117723443
location: complement(join(7266137..7266312,7270300..7270354))
location: region:7266137-7270354:-1
so has part: feature:7270300-7270354:-1:exon
so has part: feature:7266137-7266312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7270300-7270354:-1:exon

position:7270300:-1
position: 7270300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7266137-7266312:-1:exon

position:7266312:-1
position: 7266312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117723443
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723443
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerases I, II, and III subunit RPABC4-like
translation: MRPLKGRKCGELLRTLFAMDTQKDVQPPKQQPRICICGECHPESEIKSRDPIRCRECGYRIMYKKRTNRLVGFDAQ
SIO_010081: LOC117723443
subclass of: SO_0000673
so part of: LOC117723443
location: complement(join(7266137..7266312,7270300..7270354))
location: region:7266137-7270354:-1
so has part: feature:7270300-7270354:-1:exon
so has part: feature:7266137-7266312:-1:exon

XP_034378950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7270300-7270354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7266137-7266312:-1:exon

Smad1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Smad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7305926..7366851)
location: region:7305926-7366851:-1
so has part: feature:7305926-7366851:-1:exon
subclass of: SO_0000010

117723113
type: Gene
SIO_000068: ncbigene

position:7305926:-1
position: 7305926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7366851:-1
position: 7366851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7305926-7366851:-1:exon

Smad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Smad1
product: SMAD family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 2 long SRA reads, 34 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522527.1
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(7305926..7307309,7312620..7312876,7318375..7318596,7322018..7322134,7324995..7325252,7340248..7340804,7366636..7366851))
location: region:7305926-7366851:-1
so has part: feature:7366636-7366851:-1:exon
so has part: feature:7340248-7340804:-1:exon
so has part: feature:7324995-7325252:-1:exon
so has part: feature:7322018-7322134:-1:exon
so has part: feature:7318375-7318596:-1:exon
so has part: feature:7312620-7312876:-1:exon
so has part: feature:7305926-7307309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7366636-7366851:-1:exon

position:7366636:-1
position: 7366636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7340248-7340804:-1:exon

position:7340248:-1
position: 7340248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7340804:-1
position: 7340804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7324995-7325252:-1:exon

position:7324995:-1
position: 7324995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7325252:-1
position: 7325252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7322018-7322134:-1:exon

position:7322018:-1
position: 7322018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7322134:-1
position: 7322134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7318375-7318596:-1:exon

position:7318375:-1
position: 7318375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7318596:-1
position: 7318596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7312620-7312876:-1:exon

position:7312620:-1
position: 7312620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7312876:-1
position: 7312876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7305926-7307309:-1:exon

position:7307309:-1
position: 7307309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Smad1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Smad1
product: SMAD family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 2 long SRA reads, 34 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522528.1
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(7306158..7307309,7312620..7312876,7318375..7318596,7322018..7322134,7324995..7325252,7340248..7340804,7365778..7365934))
location: region:7306158-7365934:-1
so has part: feature:7365778-7365934:-1:exon
so has part: feature:7340248-7340804:-1:exon
so has part: feature:7324995-7325252:-1:exon
so has part: feature:7322018-7322134:-1:exon
so has part: feature:7318375-7318596:-1:exon
so has part: feature:7312620-7312876:-1:exon
so has part: feature:7306158-7307309:-1:exon

position:7306158:-1
position: 7306158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7365934:-1
position: 7365934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7365778-7365934:-1:exon

position:7365778:-1
position: 7365778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7340248-7340804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7324995-7325252:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7322018-7322134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7318375-7318596:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7312620-7312876:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7306158-7307309:-1:exon

Smad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Smad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 1
translation: MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMAQDGSQPMDTNMMAPPLPAEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(7307166..7307309,7312620..7312876,7318375..7318596,7322018..7322134,7324995..7325252,7340248..7340647))
location: region:7307166-7340647:-1
so has part: feature:7340248-7340647:-1:exon
so has part: feature:7324995-7325252:-1:exon
so has part: feature:7322018-7322134:-1:exon
so has part: feature:7318375-7318596:-1:exon
so has part: feature:7312620-7312876:-1:exon
so has part: feature:7307166-7307309:-1:exon

XP_034378418.1
type: Protein
SIO_000068: ncbiprotein

position:7307166:-1
position: 7307166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7340647:-1
position: 7340647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7340248-7340647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7324995-7325252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322018-7322134:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7318375-7318596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7312620-7312876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7307166-7307309:-1:exon

Smad1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Smad1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mothers against decapentaplegic homolog 1
translation: MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMAQDGSQPMDTNMMAPPLPAEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
SIO_010081: Smad1
subclass of: SO_0000673
so part of: Smad1
location: complement(join(7307166..7307309,7312620..7312876,7318375..7318596,7322018..7322134,7324995..7325252,7340248..7340647))
location: region:7307166-7340647:-1
so has part: feature:7340248-7340647:-1:exon
so has part: feature:7324995-7325252:-1:exon
so has part: feature:7322018-7322134:-1:exon
so has part: feature:7318375-7318596:-1:exon
so has part: feature:7312620-7312876:-1:exon
so has part: feature:7307166-7307309:-1:exon

XP_034378419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7340248-7340647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7324995-7325252:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7322018-7322134:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7318375-7318596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7312620-7312876:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7307166-7307309:-1:exon

LOC117723444
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7454528..7455287
location: region:7454528-7455287:1
so has part: feature:7454528-7455287:1:exon

117723444
type: Gene
SIO_000068: ncbigene

position:7454528:1
position: 7454528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7455287:1
position: 7455287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7454528-7455287:1:exon

LOC117723444
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723444
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723444
subclass of: SO_0000673
so part of: LOC117723444
location: 7454528..7455287
location: region:7454528-7455287:1
so has part: feature:7454528-7455287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7454528-7455287:1:exon

LOC117723565
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723565
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7455999..7456140
location: region:7455999-7456140:1
so has part: feature:7455999-7456140:1:exon
subclass of: SO_0000578

117723565
type: Gene
SIO_000068: ncbigene

position:7455999:1
position: 7455999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7456140:1
position: 7456140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7455999-7456140:1:exon

LOC117723565
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117723565
product: small nucleolar RNA SNORA48
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00554
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608675.1
SIO_010081: LOC117723565
subclass of: SO_0000673
so part of: LOC117723565
location: 7455999..7456140
location: region:7455999-7456140:1
so has part: feature:7455999-7456140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7455999-7456140:1:exon

LOC117723320
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7463032..7464013)
location: region:7463032-7464013:-1
so has part: feature:7463032-7464013:-1:exon

117723320
type: Gene
SIO_000068: ncbigene

position:7463032:-1
position: 7463032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7464013:-1
position: 7464013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7463032-7464013:-1:exon

LOC117723320
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: LOC117723320
product: cytosolic purine 5'-nucleotidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_004608652.1
SIO_010081: LOC117723320
so part of: LOC117723320
location: complement(7463032..7464013)
location: region:7463032-7464013:-1
so has part: feature:7463032-7464013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7463032-7464013:-1:exon

Otud4
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Otud4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7617742..7661654
location: region:7617742-7661654:1
so has part: feature:7617742-7661654:1:exon
subclass of: SO_0000010

117723161
type: Gene
SIO_000068: ncbigene

position:7617742:1
position: 7617742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7661654:1
position: 7661654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7617742-7661654:1:exon

Otud4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Otud4
product: OTU deubiquitinase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522608.1
SIO_010081: Otud4
subclass of: SO_0000673
so part of: Otud4
location: join(7617742..7618025,7622256..7622339,7624844..7624894,7631180..7631226,7631827..7631899,7633609..7633690,7635907..7636039,7637441..7637495,7637759..7637876,7637973..7638037,7639603..7639700,7641248..7641348,7641445..7641634,7649534..7649696,7651484..7651607,7652385..7652440,7653253..7653327,7653889..7654027,7654570..7654824,7655694..7655734,7656783..7661654)
location: region:7617742-7661654:1
so has part: feature:7617742-7618025:1:exon
so has part: feature:7622256-7622339:1:exon
so has part: feature:7624844-7624894:1:exon
so has part: feature:7631180-7631226:1:exon
so has part: feature:7631827-7631899:1:exon
so has part: feature:7633609-7633690:1:exon
so has part: feature:7635907-7636039:1:exon
so has part: feature:7637441-7637495:1:exon
so has part: feature:7637759-7637876:1:exon
so has part: feature:7637973-7638037:1:exon
so has part: feature:7639603-7639700:1:exon
so has part: feature:7641248-7641348:1:exon
so has part: feature:7641445-7641634:1:exon
so has part: feature:7649534-7649696:1:exon
so has part: feature:7651484-7651607:1:exon
so has part: feature:7652385-7652440:1:exon
so has part: feature:7653253-7653327:1:exon
so has part: feature:7653889-7654027:1:exon
so has part: feature:7654570-7654824:1:exon
so has part: feature:7655694-7655734:1:exon
so has part: feature:7656783-7661654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7617742-7618025:1:exon

position:7618025:1
position: 7618025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7622256-7622339:1:exon

position:7622256:1
position: 7622256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7622339:1
position: 7622339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7624844-7624894:1:exon

position:7624844:1
position: 7624844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7624894:1
position: 7624894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7631180-7631226:1:exon

position:7631180:1
position: 7631180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7631226:1
position: 7631226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7631827-7631899:1:exon

position:7631827:1
position: 7631827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7631899:1
position: 7631899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7633609-7633690:1:exon

position:7633609:1
position: 7633609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7633690:1
position: 7633690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7635907-7636039:1:exon

position:7635907:1
position: 7635907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7636039:1
position: 7636039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7637441-7637495:1:exon

position:7637441:1
position: 7637441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7637495:1
position: 7637495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7637759-7637876:1:exon

position:7637759:1
position: 7637759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7637876:1
position: 7637876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7637973-7638037:1:exon

position:7637973:1
position: 7637973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7638037:1
position: 7638037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7639603-7639700:1:exon

position:7639603:1
position: 7639603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7639700:1
position: 7639700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7641248-7641348:1:exon

position:7641248:1
position: 7641248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7641348:1
position: 7641348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7641445-7641634:1:exon

position:7641445:1
position: 7641445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7641634:1
position: 7641634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7649534-7649696:1:exon

position:7649534:1
position: 7649534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7649696:1
position: 7649696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7651484-7651607:1:exon

position:7651484:1
position: 7651484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7651607:1
position: 7651607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7652385-7652440:1:exon

position:7652385:1
position: 7652385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7652440:1
position: 7652440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7653253-7653327:1:exon

position:7653253:1
position: 7653253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7653327:1
position: 7653327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7653889-7654027:1:exon

position:7653889:1
position: 7653889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7654027:1
position: 7654027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7654570-7654824:1:exon

position:7654570:1
position: 7654570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7654824:1
position: 7654824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7655694-7655734:1:exon

position:7655694:1
position: 7655694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7655734:1
position: 7655734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7656783-7661654:1:exon

position:7656783:1
position: 7656783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Otud4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Otud4
product: OTU deubiquitinase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522609.1
SIO_010081: Otud4
subclass of: SO_0000673
so part of: Otud4
location: join(7617742..7618025,7622256..7622339,7624844..7624894,7631180..7631226,7631827..7631899,7633609..7633690,7635907..7636039,7637441..7637495,7637759..7637876,7637973..7638037,7639606..7639700,7641248..7641348,7641445..7641634,7649534..7649696,7651484..7651607,7652385..7652440,7653253..7653327,7653889..7654027,7654570..7654824,7655694..7655734,7656783..7661654)
location: region:7617742-7661654:1
so has part: feature:7617742-7618025:1:exon
so has part: feature:7622256-7622339:1:exon
so has part: feature:7624844-7624894:1:exon
so has part: feature:7631180-7631226:1:exon
so has part: feature:7631827-7631899:1:exon
so has part: feature:7633609-7633690:1:exon
so has part: feature:7635907-7636039:1:exon
so has part: feature:7637441-7637495:1:exon
so has part: feature:7637759-7637876:1:exon
so has part: feature:7637973-7638037:1:exon
so has part: feature:7639606-7639700:1:exon
so has part: feature:7641248-7641348:1:exon
so has part: feature:7641445-7641634:1:exon
so has part: feature:7649534-7649696:1:exon
so has part: feature:7651484-7651607:1:exon
so has part: feature:7652385-7652440:1:exon
so has part: feature:7653253-7653327:1:exon
so has part: feature:7653889-7654027:1:exon
so has part: feature:7654570-7654824:1:exon
so has part: feature:7655694-7655734:1:exon
so has part: feature:7656783-7661654:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7617742-7618025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7622256-7622339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7624844-7624894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7631180-7631226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7631827-7631899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7633609-7633690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7635907-7636039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7637441-7637495:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7637759-7637876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7637973-7638037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7639606-7639700:1:exon

position:7639606:1
position: 7639606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7641248-7641348:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7641445-7641634:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7649534-7649696:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7651484-7651607:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7652385-7652440:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7653253-7653327:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7653889-7654027:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7654570-7654824:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7655694-7655734:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7656783-7661654:1:exon

Otud4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Otud4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 4 isoform X1
translation: MEAAVGAPDGVDQGGVGAPEDATPMDAYLRKLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFVIYQEPNVSPSHVTENNFPEKVLLCFSNGNHYDIVYPITYKDSSAMCQSLLYELLYEKVFKTDVSKIMMGLEASEVADGSNSEISDSEDDSCKSKSTVATDVNGFKPSDSENPKNNGNSADLPLSRKVLKSLSPAVYRNVEYEIWLKSKQAQQKRDYSIAAGLQYEVGDKCHQARLDHNGKLSNADVHGVHSENGPVLSEDLGKKHTPKNLKPPPPESWNTVSGKKMKKPNSGQNFHSDTDYRGPKNLNKPIKAPSALPPRLQHPSSGVRQHVFSGHSTGSQSQKSSSEHKNLSRMPSQITRKPDRERAEEFDHVSRESYYFGLSPEERREKQAIEESRLLYEIQNRDEQAFPALSSSSVSQSPSHNSNSCVPRKSSHARDRKGSMRRADAEERKDKDSPRVHTHVDKKSEPSTLEISDDKCTRVSSPSKSKKESPSPVEQKPAEHIPLSNPAPLLVSPEVHLTPAVPSLPATVPAWPSEPTTFGPTGIPAQIPILSVTQTTGPDAAVSQAHLTPSPVPVSIQAVNQPLMPLPQTMSLYQDPLYPGFPCSEKGDRAIAPPYSLCQTGEDLPKDKNILRFFFNLGVKAYSCPMWAPHSYLYPLHQAYMAACRMYPKVPIPVYPQNTWFQEAPPAQSESDCPCTDAHYSMHPEASVNGQMPQAEIGPPAFPSPLVIPPSQVSEGHGQLSYQPELESESPGQLLHAEYEESLSGKNMYPQQSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFVENPVMRQNIVLPPDDKGELDLPLENLDLSKECDSVSAVDEFPEARVEGAHSLSEASVSSKHEGRVEQSSQTRKADIDLASGSSGVEGKAHPPTQILNRERDAVSAEPEPKRTIQSLKEKPEKVKDPKTAADVLSSGANSVDRLQRPKEESSEDENEVSNILRSGRSKQFYNQTYGGRKYKSDWGSSGRGGYQHVRGEESWKGQPNRSRDEGYQYHRHVRGRPYRGDRRRSGMGDGHRGQHT
SIO_010081: Otud4
subclass of: SO_0000673
so part of: Otud4
location: join(7617867..7618025,7622256..7622339,7624844..7624894,7631180..7631226,7631827..7631899,7633609..7633690,7635907..7636039,7637441..7637495,7637759..7637876,7637973..7638037,7639603..7639700,7641248..7641348,7641445..7641634,7649534..7649696,7651484..7651607,7652385..7652440,7653253..7653327,7653889..7654027,7654570..7654824,7655694..7655734,7656783..7657997)
location: region:7617867-7657997:1
so has part: feature:7617867-7618025:1:exon
so has part: feature:7622256-7622339:1:exon
so has part: feature:7624844-7624894:1:exon
so has part: feature:7631180-7631226:1:exon
so has part: feature:7631827-7631899:1:exon
so has part: feature:7633609-7633690:1:exon
so has part: feature:7635907-7636039:1:exon
so has part: feature:7637441-7637495:1:exon
so has part: feature:7637759-7637876:1:exon
so has part: feature:7637973-7638037:1:exon
so has part: feature:7639603-7639700:1:exon
so has part: feature:7641248-7641348:1:exon
so has part: feature:7641445-7641634:1:exon
so has part: feature:7649534-7649696:1:exon
so has part: feature:7651484-7651607:1:exon
so has part: feature:7652385-7652440:1:exon
so has part: feature:7653253-7653327:1:exon
so has part: feature:7653889-7654027:1:exon
so has part: feature:7654570-7654824:1:exon
so has part: feature:7655694-7655734:1:exon
so has part: feature:7656783-7657997:1:exon

XP_034378499.1
type: Protein
SIO_000068: ncbiprotein

position:7617867:1
position: 7617867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7657997:1
position: 7657997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7617867-7618025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7622256-7622339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7624844-7624894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7631180-7631226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7631827-7631899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7633609-7633690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7635907-7636039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7637441-7637495:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7637759-7637876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7637973-7638037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7639603-7639700:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7641248-7641348:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7641445-7641634:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7649534-7649696:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7651484-7651607:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7652385-7652440:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7653253-7653327:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7653889-7654027:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7654570-7654824:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7655694-7655734:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7656783-7657997:1:exon

Otud4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Otud4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: OTU domain-containing protein 4 isoform X2
translation: MEAAVGAPDGVDQGGVGAPEDATPMDAYLRKLGLYRKLVAKDGSCLFRAVAEQVLHSQSRHVEVRMACIHYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFVIYQEPNVSPSHVTENNFPEKVLLCFSNGNHYDIVYPITYKDSSAMCQSLLYELLYEKVFKTDVSKIMMGLEASEVADGSNSEISDSEDDSCKSKSTVATDVNGFKPSDSENPKNNGNSADLPLSRKVLKSLSPAVYRNVEYEIWLKSKQAQQKRDYSIAAGLQYEVGDKCHARLDHNGKLSNADVHGVHSENGPVLSEDLGKKHTPKNLKPPPPESWNTVSGKKMKKPNSGQNFHSDTDYRGPKNLNKPIKAPSALPPRLQHPSSGVRQHVFSGHSTGSQSQKSSSEHKNLSRMPSQITRKPDRERAEEFDHVSRESYYFGLSPEERREKQAIEESRLLYEIQNRDEQAFPALSSSSVSQSPSHNSNSCVPRKSSHARDRKGSMRRADAEERKDKDSPRVHTHVDKKSEPSTLEISDDKCTRVSSPSKSKKESPSPVEQKPAEHIPLSNPAPLLVSPEVHLTPAVPSLPATVPAWPSEPTTFGPTGIPAQIPILSVTQTTGPDAAVSQAHLTPSPVPVSIQAVNQPLMPLPQTMSLYQDPLYPGFPCSEKGDRAIAPPYSLCQTGEDLPKDKNILRFFFNLGVKAYSCPMWAPHSYLYPLHQAYMAACRMYPKVPIPVYPQNTWFQEAPPAQSESDCPCTDAHYSMHPEASVNGQMPQAEIGPPAFPSPLVIPPSQVSEGHGQLSYQPELESESPGQLLHAEYEESLSGKNMYPQQSFGPNPFLGPVPIAPPFFPHVWYGYPFQGFVENPVMRQNIVLPPDDKGELDLPLENLDLSKECDSVSAVDEFPEARVEGAHSLSEASVSSKHEGRVEQSSQTRKADIDLASGSSGVEGKAHPPTQILNRERDAVSAEPEPKRTIQSLKEKPEKVKDPKTAADVLSSGANSVDRLQRPKEESSEDENEVSNILRSGRSKQFYNQTYGGRKYKSDWGSSGRGGYQHVRGEESWKGQPNRSRDEGYQYHRHVRGRPYRGDRRRSGMGDGHRGQHT
SIO_010081: Otud4
subclass of: SO_0000673
so part of: Otud4
location: join(7617867..7618025,7622256..7622339,7624844..7624894,7631180..7631226,7631827..7631899,7633609..7633690,7635907..7636039,7637441..7637495,7637759..7637876,7637973..7638037,7639606..7639700,7641248..7641348,7641445..7641634,7649534..7649696,7651484..7651607,7652385..7652440,7653253..7653327,7653889..7654027,7654570..7654824,7655694..7655734,7656783..7657997)
location: region:7617867-7657997:1
so has part: feature:7617867-7618025:1:exon
so has part: feature:7622256-7622339:1:exon
so has part: feature:7624844-7624894:1:exon
so has part: feature:7631180-7631226:1:exon
so has part: feature:7631827-7631899:1:exon
so has part: feature:7633609-7633690:1:exon
so has part: feature:7635907-7636039:1:exon
so has part: feature:7637441-7637495:1:exon
so has part: feature:7637759-7637876:1:exon
so has part: feature:7637973-7638037:1:exon
so has part: feature:7639606-7639700:1:exon
so has part: feature:7641248-7641348:1:exon
so has part: feature:7641445-7641634:1:exon
so has part: feature:7649534-7649696:1:exon
so has part: feature:7651484-7651607:1:exon
so has part: feature:7652385-7652440:1:exon
so has part: feature:7653253-7653327:1:exon
so has part: feature:7653889-7654027:1:exon
so has part: feature:7654570-7654824:1:exon
so has part: feature:7655694-7655734:1:exon
so has part: feature:7656783-7657997:1:exon

XP_034378500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7617867-7618025:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7622256-7622339:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7624844-7624894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7631180-7631226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7631827-7631899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7633609-7633690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7635907-7636039:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7637441-7637495:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7637759-7637876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7637973-7638037:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7639606-7639700:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7641248-7641348:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7641445-7641634:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7649534-7649696:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7651484-7651607:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7652385-7652440:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7653253-7653327:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7653889-7654027:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7654570-7654824:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7655694-7655734:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7656783-7657997:1:exon

Abce1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Abce1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7664962..7691941)
location: region:7664962-7691941:-1
so has part: feature:7664962-7691941:-1:exon
subclass of: SO_0000010

117723125
type: Gene
SIO_000068: ncbigene

position:7664962:-1
position: 7664962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7691941:-1
position: 7691941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7664962-7691941:-1:exon

Abce1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Abce1
product: ATP binding cassette subfamily E member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 11 long SRA reads, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522546.1
SIO_010081: Abce1
subclass of: SO_0000673
so part of: Abce1
location: complement(join(7664962..7666666,7667427..7667538,7668881..7669003,7669107..7669249,7669340..7669450,7670850..7670908,7671008..7671067,7672001..7672222,7675189..7675310,7679409..7679498,7680491..7680587,7680827..7680896,7681028..7681165,7681664..7681781,7682869..7682966,7687226..7687311,7688309..7688438,7691773..7691941))
location: region:7664962-7691941:-1
so has part: feature:7691773-7691941:-1:exon
so has part: feature:7688309-7688438:-1:exon
so has part: feature:7687226-7687311:-1:exon
so has part: feature:7682869-7682966:-1:exon
so has part: feature:7681664-7681781:-1:exon
so has part: feature:7681028-7681165:-1:exon
so has part: feature:7680827-7680896:-1:exon
so has part: feature:7680491-7680587:-1:exon
so has part: feature:7679409-7679498:-1:exon
so has part: feature:7675189-7675310:-1:exon
so has part: feature:7672001-7672222:-1:exon
so has part: feature:7671008-7671067:-1:exon
so has part: feature:7670850-7670908:-1:exon
so has part: feature:7669340-7669450:-1:exon
so has part: feature:7669107-7669249:-1:exon
so has part: feature:7668881-7669003:-1:exon
so has part: feature:7667427-7667538:-1:exon
so has part: feature:7664962-7666666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7691773-7691941:-1:exon

position:7691773:-1
position: 7691773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7688309-7688438:-1:exon

position:7688309:-1
position: 7688309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7688438:-1
position: 7688438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7687226-7687311:-1:exon

position:7687226:-1
position: 7687226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7687311:-1
position: 7687311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7682869-7682966:-1:exon

position:7682869:-1
position: 7682869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7682966:-1
position: 7682966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7681664-7681781:-1:exon

position:7681664:-1
position: 7681664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7681781:-1
position: 7681781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7681028-7681165:-1:exon

position:7681028:-1
position: 7681028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7681165:-1
position: 7681165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7680827-7680896:-1:exon

position:7680827:-1
position: 7680827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7680896:-1
position: 7680896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7680491-7680587:-1:exon

position:7680491:-1
position: 7680491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7680587:-1
position: 7680587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7679409-7679498:-1:exon

position:7679409:-1
position: 7679409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7679498:-1
position: 7679498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7675189-7675310:-1:exon

position:7675189:-1
position: 7675189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7675310:-1
position: 7675310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7672001-7672222:-1:exon

position:7672001:-1
position: 7672001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7672222:-1
position: 7672222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7671008-7671067:-1:exon

position:7671008:-1
position: 7671008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7671067:-1
position: 7671067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7670850-7670908:-1:exon

position:7670850:-1
position: 7670850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7670908:-1
position: 7670908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7669340-7669450:-1:exon

position:7669340:-1
position: 7669340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7669450:-1
position: 7669450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7669107-7669249:-1:exon

position:7669107:-1
position: 7669107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7669249:-1
position: 7669249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7668881-7669003:-1:exon

position:7668881:-1
position: 7668881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7669003:-1
position: 7669003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7667427-7667538:-1:exon

position:7667427:-1
position: 7667427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7667538:-1
position: 7667538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7664962-7666666:-1:exon

position:7666666:-1
position: 7666666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Abce1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Abce1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family E member 1
translation: MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAAKGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMFDEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVTMPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEFELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKSTGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPADVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGVPSKNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
SIO_010081: Abce1
subclass of: SO_0000673
so part of: Abce1
location: complement(join(7666619..7666666,7667427..7667538,7668881..7669003,7669107..7669249,7669340..7669450,7670850..7670908,7671008..7671067,7672001..7672222,7675189..7675310,7679409..7679498,7680491..7680587,7680827..7680896,7681028..7681165,7681664..7681781,7682869..7682966,7687226..7687311,7688309..7688411))
location: region:7666619-7688411:-1
so has part: feature:7688309-7688411:-1:exon
so has part: feature:7687226-7687311:-1:exon
so has part: feature:7682869-7682966:-1:exon
so has part: feature:7681664-7681781:-1:exon
so has part: feature:7681028-7681165:-1:exon
so has part: feature:7680827-7680896:-1:exon
so has part: feature:7680491-7680587:-1:exon
so has part: feature:7679409-7679498:-1:exon
so has part: feature:7675189-7675310:-1:exon
so has part: feature:7672001-7672222:-1:exon
so has part: feature:7671008-7671067:-1:exon
so has part: feature:7670850-7670908:-1:exon
so has part: feature:7669340-7669450:-1:exon
so has part: feature:7669107-7669249:-1:exon
so has part: feature:7668881-7669003:-1:exon
so has part: feature:7667427-7667538:-1:exon
so has part: feature:7666619-7666666:-1:exon

XP_034378437.1
type: Protein
SIO_000068: ncbiprotein

position:7666619:-1
position: 7666619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7688411:-1
position: 7688411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7688309-7688411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7687226-7687311:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7682869-7682966:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7681664-7681781:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7681028-7681165:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7680827-7680896:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7680491-7680587:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7679409-7679498:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7675189-7675310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7672001-7672222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7671008-7671067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7670850-7670908:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7669340-7669450:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7669107-7669249:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7668881-7669003:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7667427-7667538:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7666619-7666666:-1:exon

Anapc10
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Anapc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7691977..7737671
location: region:7691977-7737671:1
so has part: feature:7691977-7737671:1:exon
subclass of: SO_0000010

117723526
type: Gene
SIO_000068: ncbigene

position:7691977:1
position: 7691977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7737671:1
position: 7737671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7691977-7737671:1:exon

Anapc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Anapc10
product: anaphase promoting complex subunit 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 long SRA reads, 17 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523161.1
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(7691977..7692086,7693354..7693528,7699680..7699770,7709541..7709661,7736105..7737671)
location: region:7691977-7737671:1
so has part: feature:7691977-7692086:1:exon
so has part: feature:7693354-7693528:1:exon
so has part: feature:7699680-7699770:1:exon
so has part: feature:7709541-7709661:1:exon
so has part: feature:7736105-7737671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7691977-7692086:1:exon

position:7692086:1
position: 7692086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7693354-7693528:1:exon

position:7693354:1
position: 7693354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7693528:1
position: 7693528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7699680-7699770:1:exon

position:7699680:1
position: 7699680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7699770:1
position: 7699770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7709541-7709661:1:exon

position:7709541:1
position: 7709541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7709661:1
position: 7709661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7736105-7737671:1:exon

position:7736105:1
position: 7736105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Anapc10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Anapc10
product: anaphase promoting complex subunit 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, 15 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034523162.1
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(7692001..7692086,7693402..7693528,7699680..7699770,7709541..7709661,7736105..7737671)
location: region:7692001-7737671:1
so has part: feature:7692001-7692086:1:exon
so has part: feature:7693402-7693528:1:exon
so has part: feature:7699680-7699770:1:exon
so has part: feature:7709541-7709661:1:exon
so has part: feature:7736105-7737671:1:exon

position:7692001:1
position: 7692001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7692001-7692086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7693402-7693528:1:exon

position:7693402:1
position: 7693402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7699680-7699770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7709541-7709661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7736105-7737671:1:exon

Anapc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Anapc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anaphase-promoting complex subunit 10
translation: MTTPNKTPPGADPKQLERTATVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(7693414..7693528,7699680..7699770,7709541..7709661,7736105..7736335)
location: region:7693414-7736335:1
so has part: feature:7693414-7693528:1:exon
so has part: feature:7699680-7699770:1:exon
so has part: feature:7709541-7709661:1:exon
so has part: feature:7736105-7736335:1:exon

XP_034379052.1
type: Protein
SIO_000068: ncbiprotein

position:7693414:1
position: 7693414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7736335:1
position: 7736335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7693414-7693528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7699680-7699770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7709541-7709661:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7736105-7736335:1:exon

Anapc10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Anapc10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anaphase-promoting complex subunit 10
translation: MTTPNKTPPGADPKQLERTATVREIGSQAVWSLSSCKPGFGVDQLRDDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKSDESYTPSKISVRVGNNFHNLQEIRQLELVEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPVEESSIGKFPRCTTIDFMMYRSIR
SIO_010081: Anapc10
subclass of: SO_0000673
so part of: Anapc10
location: join(7693414..7693528,7699680..7699770,7709541..7709661,7736105..7736335)
location: region:7693414-7736335:1
so has part: feature:7693414-7693528:1:exon
so has part: feature:7699680-7699770:1:exon
so has part: feature:7709541-7709661:1:exon
so has part: feature:7736105-7736335:1:exon

XP_034379053.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7693414-7693528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7699680-7699770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7709541-7709661:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7736105-7736335:1:exon

LOC117723527
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723527
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7733600..7733887)
location: region:7733600-7733887:-1
so has part: feature:7733600-7733887:-1:exon

117723527
type: Gene
SIO_000068: ncbigene

position:7733600:-1
position: 7733600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7733887:-1
position: 7733887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7733600-7733887:-1:exon

LOC117723527
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723527
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC117723527
subclass of: SO_0000673
so part of: LOC117723527
location: complement(7733600..7733887)
location: region:7733600-7733887:-1
so has part: feature:7733600-7733887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7733600-7733887:-1:exon

Hhip
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Hhip
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7914666..8002331)
location: region:7914666-8002331:-1
so has part: feature:7914666-8002331:-1:exon
subclass of: SO_0000010

117722890
type: Gene
SIO_000068: ncbigene

position:7914666:-1
position: 7914666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8002331:-1
position: 8002331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7914666-8002331:-1:exon

Hhip
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Hhip
product: hedgehog interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034522159.1
SIO_010081: Hhip
subclass of: SO_0000673
so part of: Hhip
location: complement(join(7914666..7915302,7917720..7917868,7929331..7929412,7931494..7931624,7932867..7932990,7935059..7935180,7938733..7938876,7939460..7939633,7940121..7940272,7988593..7988794,7989506..7989659,7995746..7995938,8001561..8002331))
location: region:7914666-8002331:-1
so has part: feature:8001561-8002331:-1:exon
so has part: feature:7995746-7995938:-1:exon
so has part: feature:7989506-7989659:-1:exon
so has part: feature:7988593-7988794:-1:exon
so has part: feature:7940121-7940272:-1:exon
so has part: feature:7939460-7939633:-1:exon
so has part: feature:7938733-7938876:-1:exon
so has part: feature:7935059-7935180:-1:exon
so has part: feature:7932867-7932990:-1:exon
so has part: feature:7931494-7931624:-1:exon
so has part: feature:7929331-7929412:-1:exon
so has part: feature:7917720-7917868:-1:exon
so has part: feature:7914666-7915302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8001561-8002331:-1:exon

position:8001561:-1
position: 8001561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7995746-7995938:-1:exon

position:7995746:-1
position: 7995746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7995938:-1
position: 7995938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7989506-7989659:-1:exon

position:7989506:-1
position: 7989506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7989659:-1
position: 7989659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7988593-7988794:-1:exon

position:7988593:-1
position: 7988593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7988794:-1
position: 7988794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7940121-7940272:-1:exon

position:7940121:-1
position: 7940121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7940272:-1
position: 7940272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7939460-7939633:-1:exon

position:7939460:-1
position: 7939460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7939633:-1
position: 7939633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7938733-7938876:-1:exon

position:7938733:-1
position: 7938733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7938876:-1
position: 7938876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7935059-7935180:-1:exon

position:7935059:-1
position: 7935059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7935180:-1
position: 7935180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7932867-7932990:-1:exon

position:7932867:-1
position: 7932867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7932990:-1
position: 7932990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7931494-7931624:-1:exon

position:7931494:-1
position: 7931494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7931624:-1
position: 7931624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7929331-7929412:-1:exon

position:7929331:-1
position: 7929331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7929412:-1
position: 7929412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7917720-7917868:-1:exon

position:7917720:-1
position: 7917720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7917868:-1
position: 7917868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7914666-7915302:-1:exon

position:7915302:-1
position: 7915302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Hhip
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Hhip
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hedgehog-interacting protein
translation: MMLKMLSFKLLLLAVALGFFEGDAKFGERSEGSGARRRRCLNGNPPKRLKRRDRRMMSQLELLSGGEILCGGFYPRVSCCLQSDSPGLGSLENKIFSTTNNTECGRLLEEIKCAPCSPHSQSLFYSPERDVLDGDLALPLLCKDYCKEFFYTCRGHIPGLLQTTADEFCFYYARKDAGLCFPDFPRKQVRGPASNYLDQMEDYEKVEINRKHKHNCFCVQEVMSGLRQPVGAVHSGDGSHRLFILEKEGYVKILTPEGELFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDVRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGRDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGASGSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHSGKLYKIIDPKRPLMPEECRVTVQPAQTLTSDCSRLCRNGYYTPTGKCCCSPGWEGDFCRIAKCEPACRHGGVCVRPNKCLCKKGYLGPQCEQVDRNLRRVTRAGILDQIIDMTSYLLDLTSYIV
SIO_010081: Hhip
subclass of: SO_0000673
so part of: Hhip
location: complement(join(7915109..7915302,7917720..7917868,7929331..7929412,7931494..7931624,7932867..7932990,7935059..7935180,7938733..7938876,7939460..7939633,7940121..7940272,7988593..7988794,7989506..7989659,7995746..7995938,8001561..8001842))
location: region:7915109-8001842:-1
so has part: feature:8001561-8001842:-1:exon
so has part: feature:7995746-7995938:-1:exon
so has part: feature:7989506-7989659:-1:exon
so has part: feature:7988593-7988794:-1:exon
so has part: feature:7940121-7940272:-1:exon
so has part: feature:7939460-7939633:-1:exon
so has part: feature:7938733-7938876:-1:exon
so has part: feature:7935059-7935180:-1:exon
so has part: feature:7932867-7932990:-1:exon
so has part: feature:7931494-7931624:-1:exon
so has part: feature:7929331-7929412:-1:exon
so has part: feature:7917720-7917868:-1:exon
so has part: feature:7915109-7915302:-1:exon

XP_034378050.1
type: Protein
SIO_000068: ncbiprotein

position:7915109:-1
position: 7915109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8001842:-1
position: 8001842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8001561-8001842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7995746-7995938:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7989506-7989659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7988593-7988794:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7940121-7940272:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7939460-7939633:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7938733-7938876:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7935059-7935180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7932867-7932990:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7931494-7931624:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7929331-7929412:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7917720-7917868:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7915109-7915302:-1:exon

LOC117723445
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723445
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8219788..8220402
location: region:8219788-8220402:1
so has part: feature:8219788-8220402:1:exon
subclass of: SO_0000010

117723445
type: Gene
SIO_000068: ncbigene

position:8219788:1
position: 8219788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8220402:1
position: 8220402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8219788-8220402:1:exon

LOC117723445
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723445
product: 40S ribosomal protein S7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523060.1
SIO_010081: LOC117723445
subclass of: SO_0000673
so part of: LOC117723445
location: 8219788..8220402
location: region:8219788-8220402:1
so has part: feature:8219788-8220402:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8219788-8220402:1:exon

LOC117723445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723445
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S7-like
translation: MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKTQVRLVRELEKKFSGKHVVFIAQRRILLKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLIFPSEIVGKRIRVNLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPECHS
SIO_010081: LOC117723445
subclass of: SO_0000673
so part of: LOC117723445
location: 8219818..8220402
location: region:8219818-8220402:1
so has part: feature:8219818-8220402:1:exon

XP_034378951.1
type: Protein
SIO_000068: ncbiprotein

position:8219818:1
position: 8219818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8219818-8220402:1:exon

Gypa
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Gypa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8366506..8385443
location: region:8366506-8385443:1
so has part: feature:8366506-8385443:1:exon
subclass of: SO_0000010

117723446
type: Gene
SIO_000068: ncbigene

position:8366506:1
position: 8366506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8385443:1
position: 8385443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8366506-8385443:1:exon

Gypa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Gypa
product: glycophorin A (MNS blood group)
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034523061.1
SIO_010081: Gypa
subclass of: SO_0000673
so part of: Gypa
location: join(8366506..8366590,8372578..8372658,8372995..8373086,8375981..8376064,8377463..8377546,8379593..8379631,8380569..8380672,8382659..8382727,8385414..8385443)
location: region:8366506-8385443:1
so has part: feature:8366506-8366590:1:exon
so has part: feature:8372578-8372658:1:exon
so has part: feature:8372995-8373086:1:exon
so has part: feature:8375981-8376064:1:exon
so has part: feature:8377463-8377546:1:exon
so has part: feature:8379593-8379631:1:exon
so has part: feature:8380569-8380672:1:exon
so has part: feature:8382659-8382727:1:exon
so has part: feature:8385414-8385443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8366506-8366590:1:exon

position:8366590:1
position: 8366590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8372578-8372658:1:exon

position:8372578:1
position: 8372578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8372658:1
position: 8372658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8372995-8373086:1:exon

position:8372995:1
position: 8372995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8373086:1
position: 8373086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8375981-8376064:1:exon

position:8375981:1
position: 8375981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8376064:1
position: 8376064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8377463-8377546:1:exon

position:8377463:1
position: 8377463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8377546:1
position: 8377546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8379593-8379631:1:exon

position:8379593:1
position: 8379593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8379631:1
position: 8379631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8380569-8380672:1:exon

position:8380569:1
position: 8380569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8380672:1
position: 8380672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8382659-8382727:1:exon

position:8382659:1
position: 8382659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8382727:1
position: 8382727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8385414-8385443:1:exon

position:8385414:1
position: 8385414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gypa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Gypa
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: glycophorin-A
translation: MAEPLHCLALSQYEFMQTKRKIQKSSVASHFLTIALHITSTQHYQEEHSPSLSGSDSLTPVMTSTPVMTSTVVNSNQHSTLMTSSVQLLVTKLNTLSLSKPVVAQRLRKPPAESITDTPRHMISPEVTARSGDLPFTPSGPGMRSPIEHFVSAPGFASPIVMILIVLGVMAGFIGTVLLISYLICRVTKKSSVDIQPPEGDDNGVPLNSIEQTTDQEFSNV
SIO_010081: Gypa
subclass of: SO_0000673
so part of: Gypa
location: join(8366506..8366590,8372578..8372658,8372995..8373086,8375981..8376064,8377463..8377546,8379593..8379631,8380569..8380672,8382659..8382727,8385414..8385443)
location: region:8366506-8385443:1
so has part: feature:8366506-8366590:1:exon
so has part: feature:8372578-8372658:1:exon
so has part: feature:8372995-8373086:1:exon
so has part: feature:8375981-8376064:1:exon
so has part: feature:8377463-8377546:1:exon
so has part: feature:8379593-8379631:1:exon
so has part: feature:8380569-8380672:1:exon
so has part: feature:8382659-8382727:1:exon
so has part: feature:8385414-8385443:1:exon

XP_034378952.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8366506-8366590:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8372578-8372658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8372995-8373086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8375981-8376064:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8377463-8377546:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8379593-8379631:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8380569-8380672:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8382659-8382727:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8385414-8385443:1:exon

LOC117723447
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723447
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8391195..8398630)
location: region:8391195-8398630:-1
so has part: feature:8391195-8398630:-1:exon

117723447
type: Gene
SIO_000068: ncbigene

position:8391195:-1
position: 8391195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8398630:-1
position: 8398630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8391195-8398630:-1:exon

LOC117723447
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723447
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723447
subclass of: SO_0000673
so part of: LOC117723447
location: complement(8391195..8391546)
location: region:8391195-8391546:-1
so has part: feature:8391195-8391546:-1:exon

position:8391546:-1
position: 8391546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8391195-8391546:-1:exon

LOC117723447
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723447
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723447
subclass of: SO_0000673
so part of: LOC117723447
location: complement(8397763..8398630)
location: region:8397763-8398630:-1
so has part: feature:8397763-8398630:-1:exon

position:8397763:-1
position: 8397763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8397763-8398630:-1:exon

Frem3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Frem3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8467600..8531611
location: region:8467600-8531611:1
so has part: feature:8467600-8531611:1:exon
subclass of: SO_0000010

117723448
type: Gene
SIO_000068: ncbigene

position:8467600:1
position: 8467600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8531611:1
position: 8531611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8467600-8531611:1:exon

Frem3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Frem3
product: FRAS1 related extracellular matrix 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 15 bases in 9 codons; deleted 8 bases in 6 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_034523063.1
SIO_010081: Frem3
subclass of: SO_0000673
so part of: Frem3
location: join(8467600..8471728,8473741..8473833,8509747..8509801,8512073..8512317,8512542..8512667,8526799..8526904,8531369..8531611)
location: region:8467600-8531611:1
so has part: feature:8467600-8471728:1:exon
so has part: feature:8473741-8473833:1:exon
so has part: feature:8509747-8509801:1:exon
so has part: feature:8512073-8512317:1:exon
so has part: feature:8512542-8512667:1:exon
so has part: feature:8526799-8526904:1:exon
so has part: feature:8531369-8531611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8467600-8471728:1:exon

position:8471728:1
position: 8471728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8473741-8473833:1:exon

position:8473741:1
position: 8473741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8473833:1
position: 8473833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8509747-8509801:1:exon

position:8509747:1
position: 8509747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8509801:1
position: 8509801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8512073-8512317:1:exon

position:8512073:1
position: 8512073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8512317:1
position: 8512317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8512542-8512667:1:exon

position:8512542:1
position: 8512542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8512667:1
position: 8512667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8526799-8526904:1:exon

position:8526799:1
position: 8526799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8526904:1
position: 8526904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8531369-8531611:1:exon

position:8531369:1
position: 8531369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Frem3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Frem3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 15 bases in 9 codons; deleted 8 bases in 6 codons; substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:8467744..8467746,aa:OTHER)
transl except: (pos:8468619..8468621,aa:OTHER)
transl except: (pos:8469876..8469878,aa:OTHER)
product: LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 3
translation: MAGDSLNLSGMSPQLLMALTCLLLTCCSLGEQVPLSENVSHWELYQPPXRTLDGGSHQNPGILIANPGFQEPQGRSVWLDPLRNLVXVQRGDECQITVLDIPRFQGALSPGQFPYDFRAHQVKYTHSGSPSAARIRIQLQLRYHAGNSTLMLPFALLQVVTHNRPLKVFKLLXAAATDRRVLNFASRSRCRLTLLPHAGGPLPKYGRLVNSAGTPLSRSHLADCGTLIQAGVRYQHTATPSSPSRDYMPMLVELLGPESQSTRSVEVLAQEYFQLQVRIQKGARSTAPRPSXSNDGDVVEQSLLTALTPEALAAEDXSDPDDLVFNILNVPEAPPGHHGRRGXGLPVSFFIQKELRELKIAYRPPTGSIFQLELQVVDEGGDTSEPXMVVVKSMNTLAPVSSYRRGLAAFEGQARPLSDAQNFQVSHKDNXQTSAVRGLQHGQLVVRGAPAWCKYFTPADLGAGRVVYHHDGSDSYSDNIILKMEDGHHQVDFLFPITMVPVGDEAPVLTTNMGLSMTEGQVVQISPFVLCATDIESENSGILFLLEDQHQEGKEEERKREADPAPGSYGSSQHPGNMLLRQAEPPLSFLHGDWHYVKKGGFYETVVTEWLQRDITEGRLFFSHPGTQSPSTLAHLAFRVLDDHDPPNLSNQHLFSISIQPADKLSPQPSPETTLEMSVRGYQLTPFQEXFLQYTDQNSDEQNLWYTLLTRPMDTASNHQVQAGEIVLTDSPNRPILHFTQAQVNHQKIAYLPPQKNLGIVPXVVQFTYKVEDTAGSSVPGTFTLLLQPLNNQPPKDINRGFAVLEGESFILGRGELNVSDPDTNVGQFFFTLVWGPQHGHRQYXIFPGESFMLADVINGNISYQPSRDQTTSDIIYLEVSGGVHHIPITVQVSVQPTVADRSTGISITPVLAISLDVLENAASEITMGITCGRKDLMLSFIVEEKPRLVMILVNGLPAERVTQEDLLDGAVSYVHTGGEIGFQRVHDAFSFILSKDAYRWAMGDNILERFLVEVTVMPMDNVAPKVLVGEPFIIYEGGKNPLTPQHVSIEDVDEILCTLTAQPSSGYLENLAPAPASEVSQAGSCISAFSIKDVQVGCINYVQSIHKGVEPGADQFTLHCSDGISFSPNVLLPLTTLPTNDASNKIFFAHISKNEVKMNHFELTVTGEHSSVSRIFRIFIIDKDNKIPTLTIQTIALKRGDSIVVTPSQLTVEDEDTPADFILFTTMQVPIHGRILYNGSHPLTTFTKKELXQNLILYCHDGSEIVKDSFSFTVTGGIHTGFYVFPDTALETHVPQIVWIQIRPLGNRLLQIAINKRATASKLLHTGHLGFLITNKYLQAIHQDAPHRLLKYKVTSGPEHGYTVSAGHGNASTHMFTQADIDEMRVYYILSKGSGSATRDAFYFSVEISGGNQLRNQPFHLNWAWISLVMLSFLASFIGSKGDTDKENKDFKGKASALVQFDPGQSTTTWKVELMPETSETFQIVLSEPDMAALEFPEMATVKIVDPEDESTVYIPEAEYKLAEAVGEFLVPVRRSGDTSQELSVICSTRPEPALHFEYSGYHFEESAGYVEVAVWRTGTDLHLLSSWTNYIGVSQHLLFSPGMSVQRLLVTILDNLPQPAFKGPEMFELLPQMSTDAVFGEPNKTTVTIHDSITDCKRSMCSSLD
SIO_010081: Frem3
subclass of: SO_0000673
so part of: Frem3
location: join(8467600..8471728,8473741..8473833,8509747..8509801,8512073..8512317,8512542..8512667,8526799..8526904,8531369..8531611)
location: region:8467600-8531611:1
so has part: feature:8467600-8471728:1:exon
so has part: feature:8473741-8473833:1:exon
so has part: feature:8509747-8509801:1:exon
so has part: feature:8512073-8512317:1:exon
so has part: feature:8512542-8512667:1:exon
so has part: feature:8526799-8526904:1:exon
so has part: feature:8531369-8531611:1:exon

XP_034378954.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8467600-8471728:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8473741-8473833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8509747-8509801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8512073-8512317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8512542-8512667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8526799-8526904:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8531369-8531611:1:exon

LOC117723142
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8481351..8481869
location: region:8481351-8481869:1
so has part: feature:8481351-8481869:1:exon
subclass of: SO_0000010

117723142
type: Gene
SIO_000068: ncbigene

position:8481351:1
position: 8481351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8481869:1
position: 8481869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8481351-8481869:1:exon

LOC117723142
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723142
product: 60S ribosomal protein L23a-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034522584.1
SIO_010081: LOC117723142
subclass of: SO_0000673
so part of: LOC117723142
location: 8481351..8481869
location: region:8481351-8481869:1
so has part: feature:8481351-8481869:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8481351-8481869:1:exon

LOC117723142
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L23a-like
translation: MAPKAKKEAPAPPPQAEAKAKALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII
SIO_010081: LOC117723142
subclass of: SO_0000673
so part of: LOC117723142
location: 8481351..8481824
location: region:8481351-8481824:1
so has part: feature:8481351-8481824:1:exon

XP_034378475.1
type: Protein
SIO_000068: ncbiprotein

position:8481824:1
position: 8481824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8481351-8481824:1:exon

LOC117723140
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8516705..8517431
location: region:8516705-8517431:1
so has part: feature:8516705-8517431:1:exon
subclass of: SO_0000010

117723140
type: Gene
SIO_000068: ncbigene

position:8516705:1
position: 8516705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8517431:1
position: 8517431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8516705-8517431:1:exon

LOC117723140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723140
product: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034522583.1
SIO_010081: LOC117723140
subclass of: SO_0000673
so part of: LOC117723140
location: 8516705..8517431
location: region:8516705-8517431:1
so has part: feature:8516705-8517431:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8516705-8517431:1:exon

LOC117723140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like
translation: MAARTSQRALARVATGCRPKSTTVTEAPARGSTRNVRYLAPCGILMNKTLPPRASVLPKELCARTFFRITAPLVNKRKVYSERRIIGYSMQEMYDVVSGMEDYKHFVPWCKQSDIISRRSGYCKTRLEIGFPPVLERYRSIVTLVKPHLVKASCTDGKLFNHLETIWCFSPGLPGYPRTCTLDFSISFEFRSLLHSQLATLFFNEVVKQMVAAFERRACKLYGPETNIPQELMLHEIHHT
SIO_010081: LOC117723140
subclass of: SO_0000673
so part of: LOC117723140
location: 8516705..8517427
location: region:8516705-8517427:1
so has part: feature:8516705-8517427:1:exon

XP_034378474.1
type: Protein
SIO_000068: ncbiprotein

position:8517427:1
position: 8517427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8516705-8517427:1:exon

Smarca5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Smarca5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8534766..8570445)
location: region:8534766-8570445:-1
so has part: feature:8534766-8570445:-1:exon
subclass of: SO_0000010

117723013
type: Gene
SIO_000068: ncbigene

position:8534766:-1
position: 8534766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8570445:-1
position: 8570445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8534766-8570445:-1:exon

Smarca5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Smarca5
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 mRNAs, 6 long SRA reads, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522362.1
SIO_010081: Smarca5
subclass of: SO_0000673
so part of: Smarca5
location: complement(join(8534766..8535948,8536816..8536923,8539070..8539282,8539677..8539795,8539919..8540051,8543114..8543236,8543544..8543657,8543918..8544028,8544986..8545105,8546152..8546300,8548259..8548391,8550133..8550285,8551050..8551171,8553336..8553562,8554266..8554375,8557409..8557477,8559435..8559566,8559656..8559811,8561266..8561445,8562095..8562195,8563530..8563630,8564404..8564570,8567417..8567491,8569847..8570445))
location: region:8534766-8570445:-1
so has part: feature:8569847-8570445:-1:exon
so has part: feature:8567417-8567491:-1:exon
so has part: feature:8564404-8564570:-1:exon
so has part: feature:8563530-8563630:-1:exon
so has part: feature:8562095-8562195:-1:exon
so has part: feature:8561266-8561445:-1:exon
so has part: feature:8559656-8559811:-1:exon
so has part: feature:8559435-8559566:-1:exon
so has part: feature:8557409-8557477:-1:exon
so has part: feature:8554266-8554375:-1:exon
so has part: feature:8553336-8553562:-1:exon
so has part: feature:8551050-8551171:-1:exon
so has part: feature:8550133-8550285:-1:exon
so has part: feature:8548259-8548391:-1:exon
so has part: feature:8546152-8546300:-1:exon
so has part: feature:8544986-8545105:-1:exon
so has part: feature:8543918-8544028:-1:exon
so has part: feature:8543544-8543657:-1:exon
so has part: feature:8543114-8543236:-1:exon
so has part: feature:8539919-8540051:-1:exon
so has part: feature:8539677-8539795:-1:exon
so has part: feature:8539070-8539282:-1:exon
so has part: feature:8536816-8536923:-1:exon
so has part: feature:8534766-8535948:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8569847-8570445:-1:exon

position:8569847:-1
position: 8569847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8567417-8567491:-1:exon

position:8567417:-1
position: 8567417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8567491:-1
position: 8567491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8564404-8564570:-1:exon

position:8564404:-1
position: 8564404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8564570:-1
position: 8564570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8563530-8563630:-1:exon

position:8563530:-1
position: 8563530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8563630:-1
position: 8563630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8562095-8562195:-1:exon

position:8562095:-1
position: 8562095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8562195:-1
position: 8562195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8561266-8561445:-1:exon

position:8561266:-1
position: 8561266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8561445:-1
position: 8561445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8559656-8559811:-1:exon

position:8559656:-1
position: 8559656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8559811:-1
position: 8559811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8559435-8559566:-1:exon

position:8559435:-1
position: 8559435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8559566:-1
position: 8559566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8557409-8557477:-1:exon

position:8557409:-1
position: 8557409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8557477:-1
position: 8557477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8554266-8554375:-1:exon

position:8554266:-1
position: 8554266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8554375:-1
position: 8554375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8553336-8553562:-1:exon

position:8553336:-1
position: 8553336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8553562:-1
position: 8553562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8551050-8551171:-1:exon

position:8551050:-1
position: 8551050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8551171:-1
position: 8551171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8550133-8550285:-1:exon

position:8550133:-1
position: 8550133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8550285:-1
position: 8550285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8548259-8548391:-1:exon

position:8548259:-1
position: 8548259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8548391:-1
position: 8548391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8546152-8546300:-1:exon

position:8546152:-1
position: 8546152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8546300:-1
position: 8546300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8544986-8545105:-1:exon

position:8544986:-1
position: 8544986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8545105:-1
position: 8545105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8543918-8544028:-1:exon

position:8543918:-1
position: 8543918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8544028:-1
position: 8544028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8543544-8543657:-1:exon

position:8543544:-1
position: 8543544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8543657:-1
position: 8543657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8543114-8543236:-1:exon

position:8543114:-1
position: 8543114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8543236:-1
position: 8543236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8539919-8540051:-1:exon

position:8539919:-1
position: 8539919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8540051:-1
position: 8540051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8539677-8539795:-1:exon

position:8539677:-1
position: 8539677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8539795:-1
position: 8539795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:8539070-8539282:-1:exon

position:8539070:-1
position: 8539070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8539282:-1
position: 8539282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:8536816-8536923:-1:exon

position:8536816:-1
position: 8536816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8536923:-1
position: 8536923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:8534766-8535948:-1:exon

position:8535948:-1
position: 8535948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Smarca5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Smarca5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
translation: MSSAAEPPPPPPPESAPSKPSAAGAGGSSLGNKGGPEGGAAPAAPSAAGSGPADTEMEEVFDDESPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRSPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
SIO_010081: Smarca5
subclass of: SO_0000673
so part of: Smarca5
location: complement(join(8535883..8535948,8536816..8536923,8539070..8539282,8539677..8539795,8539919..8540051,8543114..8543236,8543544..8543657,8543918..8544028,8544986..8545105,8546152..8546300,8548259..8548391,8550133..8550285,8551050..8551171,8553336..8553562,8554266..8554375,8557409..8557477,8559435..8559566,8559656..8559811,8561266..8561445,8562095..8562195,8563530..8563630,8564404..8564570,8567417..8567491,8569847..8570020))
location: region:8535883-8570020:-1
so has part: feature:8569847-8570020:-1:exon
so has part: feature:8567417-8567491:-1:exon
so has part: feature:8564404-8564570:-1:exon
so has part: feature:8563530-8563630:-1:exon
so has part: feature:8562095-8562195:-1:exon
so has part: feature:8561266-8561445:-1:exon
so has part: feature:8559656-8559811:-1:exon
so has part: feature:8559435-8559566:-1:exon
so has part: feature:8557409-8557477:-1:exon
so has part: feature:8554266-8554375:-1:exon
so has part: feature:8553336-8553562:-1:exon
so has part: feature:8551050-8551171:-1:exon
so has part: feature:8550133-8550285:-1:exon
so has part: feature:8548259-8548391:-1:exon
so has part: feature:8546152-8546300:-1:exon
so has part: feature:8544986-8545105:-1:exon
so has part: feature:8543918-8544028:-1:exon
so has part: feature:8543544-8543657:-1:exon
so has part: feature:8543114-8543236:-1:exon
so has part: feature:8539919-8540051:-1:exon
so has part: feature:8539677-8539795:-1:exon
so has part: feature:8539070-8539282:-1:exon
so has part: feature:8536816-8536923:-1:exon
so has part: feature:8535883-8535948:-1:exon

XP_034378253.1
type: Protein
SIO_000068: ncbiprotein

position:8535883:-1
position: 8535883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8570020:-1
position: 8570020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8569847-8570020:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8567417-8567491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8564404-8564570:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8563530-8563630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8562095-8562195:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8561266-8561445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8559656-8559811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8559435-8559566:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8557409-8557477:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8554266-8554375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8553336-8553562:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8551050-8551171:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8550133-8550285:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8548259-8548391:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8546152-8546300:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8544986-8545105:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8543918-8544028:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8543544-8543657:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8543114-8543236:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8539919-8540051:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8539677-8539795:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8539070-8539282:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8536816-8536923:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8535883-8535948:-1:exon

Gab1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Gab1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8604722..8713900)
location: region:8604722-8713900:-1
so has part: feature:8604722-8713900:-1:exon
subclass of: SO_0000010

117723122
type: Gene
SIO_000068: ncbigene

position:8604722:-1
position: 8604722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8713900:-1
position: 8713900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8604722-8713900:-1:exon

Gab1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Gab1
product: GRB2 associated binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 long SRA reads, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034522543.1
SIO_010081: Gab1
subclass of: SO_0000673
so part of: Gab1
location: complement(join(8604722..8606735,8609906..8610028,8613606..8613729,8613962..8614055,8622863..8623166,8623347..8623432,8624822..8625423,8627611..8627833,8636638..8636932,8712178..8713898))
location: region:8604722-8713898:-1
so has part: feature:8712178-8713898:-1:exon
so has part: feature:8636638-8636932:-1:exon
so has part: feature:8627611-8627833:-1:exon
so has part: feature:8624822-8625423:-1:exon
so has part: feature:8623347-8623432:-1:exon
so has part: feature:8622863-8623166:-1:exon
so has part: feature:8613962-8614055:-1:exon
so has part: feature:8613606-8613729:-1:exon
so has part: feature:8609906-8610028:-1:exon
so has part: feature:8604722-8606735:-1:exon

position:8713898:-1
position: 8713898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8712178-8713898:-1:exon

position:8712178:-1
position: 8712178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8636638-8636932:-1:exon

position:8636638:-1
position: 8636638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8636932:-1
position: 8636932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8627611-8627833:-1:exon

position:8627611:-1
position: 8627611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8627833:-1
position: 8627833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8624822-8625423:-1:exon

position:8624822:-1
position: 8624822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8625423:-1
position: 8625423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8623347-8623432:-1:exon

position:8623347:-1
position: 8623347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8623432:-1
position: 8623432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8622863-8623166:-1:exon

position:8622863:-1
position: 8622863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8623166:-1
position: 8623166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8613962-8614055:-1:exon

position:8613962:-1
position: 8613962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8614055:-1
position: 8614055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8613606-8613729:-1:exon

position:8613606:-1
position: 8613606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8613729:-1
position: 8613729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8609906-8610028:-1:exon

position:8609906:-1
position: 8609906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8610028:-1
position: 8610028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8604722-8606735:-1:exon

position:8606735:-1
position: 8606735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gab1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Gab1
product: GRB2 associated binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034522542.1
SIO_010081: Gab1
subclass of: SO_0000673
so part of: Gab1
location: complement(join(8604723..8606735,8609906..8610028,8613606..8613729,8613962..8614055,8615238..8615327,8622863..8623166,8623347..8623432,8624822..8625423,8627611..8627833,8636638..8636932,8712178..8713900))
location: region:8604723-8713900:-1
so has part: feature:8712178-8713900:-1:exon
so has part: feature:8636638-8636932:-1:exon
so has part: feature:8627611-8627833:-1:exon
so has part: feature:8624822-8625423:-1:exon
so has part: feature:8623347-8623432:-1:exon
so has part: feature:8622863-8623166:-1:exon
so has part: feature:8615238-8615327:-1:exon
so has part: feature:8613962-8614055:-1:exon
so has part: feature:8613606-8613729:-1:exon
so has part: feature:8609906-8610028:-1:exon
so has part: feature:8604723-8606735:-1:exon

position:8604723:-1
position: 8604723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8712178-8713900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8636638-8636932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8627611-8627833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8624822-8625423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8623347-8623432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8622863-8623166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8615238-8615327:-1:exon

position:8615238:-1
position: 8615238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8615327:-1
position: 8615327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8613962-8614055:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8613606-8613729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8609906-8610028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8604723-8606735:-1:exon

Gab1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Gab1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRB2-associated-binding protein 1 isoform X2
translation: MSGGEVVCSGWLRKSPPEKKLKRYAWKRRWFVLRSGRLTGDPDVLEYYKNDHAKKPIRIIDLNLCQQVDAGLTFNKKEFENSYIFDINTIDRTFYLVADSEEDMNKWVRCICDICGFNPTEEDPVKPPASSSQAPVDSPFAINTAPTSTQMEASSVTLPPSYQLISLPPHPDLGFQEDPQDYLLLINCQSKKPEPTRAHFDSAKPTSSETDCNDNVPSHKTPASSQNKHGMNGFFQQQMMYDCPPSRVTSLSGESSLYNLPRSYSHDVLPKESPSSTEADGELYIFNTPSGTSSVETQMRHVSISYDIPPTPGNTYQIPRTFPEGTLGQSSKLDTIPDIPPPRPPKPHSTHDRSPVETCGVPRMASDTDSSYCIPATGMPPSRSNTVSTVDLNKLRKDASSQDCYDIPRTFPSDRSSSLEGFHNQFKIKTMLTAGGVSGEELEENYVPMNPNSPPRQHSSSFTEPIQEPNYVPMTPGTFDFSSFGMQVPPPAHMGFRSSPKTPPRRPVPVADCEPPPVDRNLKPDRKAKPAPLEIKPLSEWEELQAPVRSPITRSFARDSSRFPMSPRPDSVHSTTSSSDSHDSEENYVPMNPNLSNEDPNLFGGSSLDGGNSPMIKPKGDKQVEYLDLDLDSGKSTPPRKQKNSGSGSSMADERVDYVVVDQQKTLALKSTREAWTDGRQSTESETPTKSVK
SIO_010081: Gab1
subclass of: SO_0000673
so part of: Gab1
location: complement(join(8606577..8606735,8609906..8610028,8613606..8613729,8613962..8614055,8622863..8623166,8623347..8623432,8624822..8625423,8627611..8627833,8636638..8636932,8712178..8712249))
location: region:8606577-8712249:-1
so has part: feature:8712178-8712249:-1:exon
so has part: feature:8636638-8636932:-1:exon
so has part: feature:8627611-8627833:-1:exon
so has part: feature:8624822-8625423:-1:exon
so has part: feature:8623347-8623432:-1:exon
so has part: feature:8622863-8623166:-1:exon
so has part: feature:8613962-8614055:-1:exon
so has part: feature:8613606-8613729:-1:exon
so has part: feature:8609906-8610028:-1:exon
so has part: feature:8606577-8606735:-1:exon

XP_034378434.1
type: Protein
SIO_000068: ncbiprotein

position:8606577:-1
position: 8606577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8712249:-1
position: 8712249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8712178-8712249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8636638-8636932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8627611-8627833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8624822-8625423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8623347-8623432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8622863-8623166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8613962-8614055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8613606-8613729:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8609906-8610028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8606577-8606735:-1:exon

Gab1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Gab1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRB2-associated-binding protein 1 isoform X1
translation: MSGGEVVCSGWLRKSPPEKKLKRYAWKRRWFVLRSGRLTGDPDVLEYYKNDHAKKPIRIIDLNLCQQVDAGLTFNKKEFENSYIFDINTIDRTFYLVADSEEDMNKWVRCICDICGFNPTEEDPVKPPASSSQAPVDSPFAINTAPTSTQMEASSVTLPPSYQLISLPPHPDLGFQEDPQDYLLLINCQSKKPEPTRAHFDSAKPTSSETDCNDNVPSHKTPASSQNKHGMNGFFQQQMMYDCPPSRVTSLSGESSLYNLPRSYSHDVLPKESPSSTEADGELYIFNTPSGTSSVETQMRHVSISYDIPPTPGNTYQIPRTFPEGTLGQSSKLDTIPDIPPPRPPKPHSTHDRSPVETCGVPRMASDTDSSYCIPATGMPPSRSNTVSTVDLNKLRKDASSQDCYDIPRTFPSDRSSSLEGFHNQFKIKTMLTAGGVSGEELEENYVPMNPNSPPRQHSSSFTEPIQEPNYVPMTPGTFDFSSFGMQVPPPAHMGFRSSPKTPPRRPVPVADCEPPPVDRNLKPDRKGQSPKILRPKPHGLERTDSQTIGDFATRRKAKPAPLEIKPLSEWEELQAPVRSPITRSFARDSSRFPMSPRPDSVHSTTSSSDSHDSEENYVPMNPNLSNEDPNLFGGSSLDGGNSPMIKPKGDKQVEYLDLDLDSGKSTPPRKQKNSGSGSSMADERVDYVVVDQQKTLALKSTREAWTDGRQSTESETPTKSVK
SIO_010081: Gab1
subclass of: SO_0000673
so part of: Gab1
location: complement(join(8606577..8606735,8609906..8610028,8613606..8613729,8613962..8614055,8615238..8615327,8622863..8623166,8623347..8623432,8624822..8625423,8627611..8627833,8636638..8636932,8712178..8712249))
location: region:8606577-8712249:-1
so has part: feature:8712178-8712249:-1:exon
so has part: feature:8636638-8636932:-1:exon
so has part: feature:8627611-8627833:-1:exon
so has part: feature:8624822-8625423:-1:exon
so has part: feature:8623347-8623432:-1:exon
so has part: feature:8622863-8623166:-1:exon
so has part: feature:8615238-8615327:-1:exon
so has part: feature:8613962-8614055:-1:exon
so has part: feature:8613606-8613729:-1:exon
so has part: feature:8609906-8610028:-1:exon
so has part: feature:8606577-8606735:-1:exon

XP_034378433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8712178-8712249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8636638-8636932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8627611-8627833:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8624822-8625423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8623347-8623432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8622863-8623166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8615238-8615327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8613962-8614055:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8613606-8613729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8609906-8610028:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8606577-8606735:-1:exon

LOC117723533
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8788340..8788716)
location: region:8788340-8788716:-1
so has part: feature:8788340-8788716:-1:exon

117723533
type: Gene
SIO_000068: ncbigene

position:8788340:-1
position: 8788340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8788716:-1
position: 8788716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8788340-8788716:-1:exon

LOC117723533
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723533
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723533
subclass of: SO_0000673
so part of: LOC117723533
location: complement(8788340..8788716)
location: region:8788340-8788716:-1
so has part: feature:8788340-8788716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8788340-8788716:-1:exon

Usp38
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Usp38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8811020..8842264)
location: region:8811020-8842264:-1
so has part: feature:8811020-8842264:-1:exon
subclass of: SO_0000010

117723145
type: Gene
SIO_000068: ncbigene

position:8811020:-1
position: 8811020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8842264:-1
position: 8842264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8811020-8842264:-1:exon

Usp38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Usp38
product: ubiquitin specific peptidase 38
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 2 long SRA reads, 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522589.1
SIO_010081: Usp38
subclass of: SO_0000673
so part of: Usp38
location: complement(join(8811020..8812282,8814707..8816069,8817463..8817569,8819842..8819935,8823548..8823741,8825957..8826115,8830407..8830508,8833067..8833196,8839225..8839360,8840936..8842264))
location: region:8811020-8842264:-1
so has part: feature:8840936-8842264:-1:exon
so has part: feature:8839225-8839360:-1:exon
so has part: feature:8833067-8833196:-1:exon
so has part: feature:8830407-8830508:-1:exon
so has part: feature:8825957-8826115:-1:exon
so has part: feature:8823548-8823741:-1:exon
so has part: feature:8819842-8819935:-1:exon
so has part: feature:8817463-8817569:-1:exon
so has part: feature:8814707-8816069:-1:exon
so has part: feature:8811020-8812282:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8840936-8842264:-1:exon

position:8840936:-1
position: 8840936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8839225-8839360:-1:exon

position:8839225:-1
position: 8839225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8839360:-1
position: 8839360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8833067-8833196:-1:exon

position:8833067:-1
position: 8833067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8833196:-1
position: 8833196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8830407-8830508:-1:exon

position:8830407:-1
position: 8830407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8830508:-1
position: 8830508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8825957-8826115:-1:exon

position:8825957:-1
position: 8825957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8826115:-1
position: 8826115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8823548-8823741:-1:exon

position:8823548:-1
position: 8823548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8823741:-1
position: 8823741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8819842-8819935:-1:exon

position:8819842:-1
position: 8819842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8819935:-1
position: 8819935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8817463-8817569:-1:exon

position:8817463:-1
position: 8817463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8817569:-1
position: 8817569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8814707-8816069:-1:exon

position:8814707:-1
position: 8814707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8816069:-1
position: 8816069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8811020-8812282:-1:exon

position:8812282:-1
position: 8812282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Usp38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Usp38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 38
translation: MDKILEGLVSSSHPLPLKRMIVRKVVESAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQVGHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSVLDLFSLLQVEVLRMVCERPEPLLCARLSDLLTDFVQCVPKGKLSITFCQQLVRTIGHFQCVSTQEKELREYVSQVTKVSNLLQNIWKAEPSTLLPSLQEVFASISSTDASFEPSVALASLVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAVQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHVIVPHIVNLVHSFRSDGLPSSTAFLVQLTELVHCMMYHYSGFPDLYEPILEAVKDFPKPSEEKIKLILNQSAWTSQSNALASCLSRLSGKSETGKTGLINLGNTCYMNSVLQALFMATEFRRQVLSLNLNGCNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEEKLLRVQSTHKPSEGLGCAETCLQEVTSKIDMPAESPGPGDSEKTLIEKMFGGKLRTHICCLNCRSTSHKVEAFTDLSLAFCPSPSVEDLSFHHPTSLPSAQDDGLMQTSVADPEEEPVVYNPATSAFVCDSAANQRLLASPPAEFHCEENSSVPEESAEVLLSKDVPQNPGGESTTSVTDLLNYFLAPEVLTGENQYYCESCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKILDNVSLPLVLELPVKRTASFSSLSESWSVDVDFTDINENLAKKLKPSGTEEAFCPKLVPYLLSSVVVHSGVSSESGHYYSYARNITGTESSYQMCPQSESLALAPSQSCLLGGESPNTVIEQDLENKEMSQEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQSSANGVCGDNPASGVWVNGDPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPGSCGPTGGGGGGGFNTVGRLVF
SIO_010081: Usp38
subclass of: SO_0000673
so part of: Usp38
location: complement(join(8812121..8812282,8814707..8816069,8817463..8817569,8819842..8819935,8823548..8823741,8825957..8826115,8830407..8830508,8833067..8833196,8839225..8839360,8840936..8841617))
location: region:8812121-8841617:-1
so has part: feature:8840936-8841617:-1:exon
so has part: feature:8839225-8839360:-1:exon
so has part: feature:8833067-8833196:-1:exon
so has part: feature:8830407-8830508:-1:exon
so has part: feature:8825957-8826115:-1:exon
so has part: feature:8823548-8823741:-1:exon
so has part: feature:8819842-8819935:-1:exon
so has part: feature:8817463-8817569:-1:exon
so has part: feature:8814707-8816069:-1:exon
so has part: feature:8812121-8812282:-1:exon

XP_034378480.1
type: Protein
SIO_000068: ncbiprotein

position:8812121:-1
position: 8812121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8841617:-1
position: 8841617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8840936-8841617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8839225-8839360:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8833067-8833196:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8830407-8830508:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8825957-8826115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8823548-8823741:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8819842-8819935:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8817463-8817569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8814707-8816069:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8812121-8812282:-1:exon

LOC117723543
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723543
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9074726..9075684)
location: region:9074726-9075684:-1
so has part: feature:9074726-9075684:-1:exon

117723543
type: Gene
SIO_000068: ncbigene

position:9074726:-1
position: 9074726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9075684:-1
position: 9075684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9074726-9075684:-1:exon

LOC117723543
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723543
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723543
subclass of: SO_0000673
so part of: LOC117723543
location: complement(9074726..9075684)
location: region:9074726-9075684:-1
so has part: feature:9074726-9075684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9074726-9075684:-1:exon

Inpp4b
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9108518..9814373
location: region:9108518-9814373:1
so has part: feature:9108518-9814373:1:exon
subclass of: SO_0000010

117723009
type: Gene
SIO_000068: ncbigene

position:9108518:1
position: 9108518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9814373:1
position: 9814373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9108518-9814373:1:exon

Inpp4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Inpp4b
product: inositol polyphosphate-4-phosphatase type II B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034522353.1
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(9108518..9108661,9231829..9231891,9443982..9444045,9462043..9462252,9464505..9464549,9488633..9488751,9491133..9491249,9569325..9569375,9580816..9580895,9609579..9609690,9616026..9616098,9630233..9630380,9663373..9663503,9663884..9663988,9672174..9672282,9687541..9687718,9699726..9699929,9715857..9716022,9735839..9736011,9737169..9737292,9738348..9738465,9742662..9742802,9744722..9744819,9762902..9763014,9765730..9765884,9810783..9814373)
location: region:9108518-9814373:1
so has part: feature:9108518-9108661:1:exon
so has part: feature:9231829-9231891:1:exon
so has part: feature:9443982-9444045:1:exon
so has part: feature:9462043-9462252:1:exon
so has part: feature:9464505-9464549:1:exon
so has part: feature:9488633-9488751:1:exon
so has part: feature:9491133-9491249:1:exon
so has part: feature:9569325-9569375:1:exon
so has part: feature:9580816-9580895:1:exon
so has part: feature:9609579-9609690:1:exon
so has part: feature:9616026-9616098:1:exon
so has part: feature:9630233-9630380:1:exon
so has part: feature:9663373-9663503:1:exon
so has part: feature:9663884-9663988:1:exon
so has part: feature:9672174-9672282:1:exon
so has part: feature:9687541-9687718:1:exon
so has part: feature:9699726-9699929:1:exon
so has part: feature:9715857-9716022:1:exon
so has part: feature:9735839-9736011:1:exon
so has part: feature:9737169-9737292:1:exon
so has part: feature:9738348-9738465:1:exon
so has part: feature:9742662-9742802:1:exon
so has part: feature:9744722-9744819:1:exon
so has part: feature:9762902-9763014:1:exon
so has part: feature:9765730-9765884:1:exon
so has part: feature:9810783-9814373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9108518-9108661:1:exon

position:9108661:1
position: 9108661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9231829-9231891:1:exon

position:9231829:1
position: 9231829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9231891:1
position: 9231891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9443982-9444045:1:exon

position:9443982:1
position: 9443982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9444045:1
position: 9444045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9462043-9462252:1:exon

position:9462043:1
position: 9462043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9462252:1
position: 9462252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9464505-9464549:1:exon

position:9464505:1
position: 9464505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9464549:1
position: 9464549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9488633-9488751:1:exon

position:9488633:1
position: 9488633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9488751:1
position: 9488751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9491133-9491249:1:exon

position:9491133:1
position: 9491133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9491249:1
position: 9491249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9569325-9569375:1:exon

position:9569325:1
position: 9569325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9569375:1
position: 9569375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9580816-9580895:1:exon

position:9580816:1
position: 9580816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9580895:1
position: 9580895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9609579-9609690:1:exon

position:9609579:1
position: 9609579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9609690:1
position: 9609690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9616026-9616098:1:exon

position:9616026:1
position: 9616026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9616098:1
position: 9616098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9630233-9630380:1:exon

position:9630233:1
position: 9630233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9630380:1
position: 9630380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9663373-9663503:1:exon

position:9663373:1
position: 9663373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9663503:1
position: 9663503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9663884-9663988:1:exon

position:9663884:1
position: 9663884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9663988:1
position: 9663988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9672174-9672282:1:exon

position:9672174:1
position: 9672174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9672282:1
position: 9672282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9687541-9687718:1:exon

position:9687541:1
position: 9687541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9687718:1
position: 9687718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9699726-9699929:1:exon

position:9699726:1
position: 9699726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9699929:1
position: 9699929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9715857-9716022:1:exon

position:9715857:1
position: 9715857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9716022:1
position: 9716022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9735839-9736011:1:exon

position:9735839:1
position: 9735839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9736011:1
position: 9736011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9737169-9737292:1:exon

position:9737169:1
position: 9737169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9737292:1
position: 9737292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9738348-9738465:1:exon

position:9738348:1
position: 9738348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9738465:1
position: 9738465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9742662-9742802:1:exon

position:9742662:1
position: 9742662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9742802:1
position: 9742802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9744722-9744819:1:exon

position:9744722:1
position: 9744722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9744819:1
position: 9744819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9762902-9763014:1:exon

position:9762902:1
position: 9762902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9763014:1
position: 9763014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:9765730-9765884:1:exon

position:9765730:1
position: 9765730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9765884:1
position: 9765884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:9810783-9814373:1:exon

position:9810783:1
position: 9810783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Inpp4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Inpp4b
product: inositol polyphosphate-4-phosphatase type II B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034522351.1
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(9108518..9108661,9231829..9231891,9443982..9444045,9462043..9462252,9464505..9464549,9488633..9488751,9491133..9491249,9569325..9569375,9580816..9580895,9609579..9609690,9616026..9616098,9630233..9630380,9663373..9663503,9663884..9663988,9672174..9672282,9687541..9687718,9699726..9699929,9715857..9716022,9735839..9736011,9737169..9737292,9738348..9738465,9742662..9742802,9744722..9744819,9762902..9763014,9765730..9765884,9809401..9810740)
location: region:9108518-9810740:1
so has part: feature:9108518-9108661:1:exon
so has part: feature:9231829-9231891:1:exon
so has part: feature:9443982-9444045:1:exon
so has part: feature:9462043-9462252:1:exon
so has part: feature:9464505-9464549:1:exon
so has part: feature:9488633-9488751:1:exon
so has part: feature:9491133-9491249:1:exon
so has part: feature:9569325-9569375:1:exon
so has part: feature:9580816-9580895:1:exon
so has part: feature:9609579-9609690:1:exon
so has part: feature:9616026-9616098:1:exon
so has part: feature:9630233-9630380:1:exon
so has part: feature:9663373-9663503:1:exon
so has part: feature:9663884-9663988:1:exon
so has part: feature:9672174-9672282:1:exon
so has part: feature:9687541-9687718:1:exon
so has part: feature:9699726-9699929:1:exon
so has part: feature:9715857-9716022:1:exon
so has part: feature:9735839-9736011:1:exon
so has part: feature:9737169-9737292:1:exon
so has part: feature:9738348-9738465:1:exon
so has part: feature:9742662-9742802:1:exon
so has part: feature:9744722-9744819:1:exon
so has part: feature:9762902-9763014:1:exon
so has part: feature:9765730-9765884:1:exon
so has part: feature:9809401-9810740:1:exon

position:9810740:1
position: 9810740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9108518-9108661:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9231829-9231891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9443982-9444045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9462043-9462252:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9464505-9464549:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9488633-9488751:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9491133-9491249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9569325-9569375:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9580816-9580895:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9609579-9609690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9616026-9616098:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9630233-9630380:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9663373-9663503:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9663884-9663988:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9672174-9672282:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9687541-9687718:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9699726-9699929:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9715857-9716022:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9735839-9736011:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9737169-9737292:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9738348-9738465:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9742662-9742802:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9744722-9744819:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9762902-9763014:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9765730-9765884:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9809401-9810740:1:exon

position:9809401:1
position: 9809401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Inpp4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Inpp4b
product: inositol polyphosphate-4-phosphatase type II B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034522352.1
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(9431820..9431830,9443982..9444045,9462043..9462252,9464505..9464549,9488633..9488751,9491133..9491249,9569325..9569375,9580816..9580895,9609579..9609690,9616026..9616098,9630233..9630380,9663373..9663503,9663884..9663988,9672174..9672282,9687541..9687718,9699726..9699929,9715857..9716022,9735839..9736011,9737169..9737292,9738348..9738465,9742662..9742802,9744722..9744819,9762902..9763014,9765730..9765884,9809401..9810740)
location: region:9431820-9810740:1
so has part: feature:9431820-9431830:1:exon
so has part: feature:9443982-9444045:1:exon
so has part: feature:9462043-9462252:1:exon
so has part: feature:9464505-9464549:1:exon
so has part: feature:9488633-9488751:1:exon
so has part: feature:9491133-9491249:1:exon
so has part: feature:9569325-9569375:1:exon
so has part: feature:9580816-9580895:1:exon
so has part: feature:9609579-9609690:1:exon
so has part: feature:9616026-9616098:1:exon
so has part: feature:9630233-9630380:1:exon
so has part: feature:9663373-9663503:1:exon
so has part: feature:9663884-9663988:1:exon
so has part: feature:9672174-9672282:1:exon
so has part: feature:9687541-9687718:1:exon
so has part: feature:9699726-9699929:1:exon
so has part: feature:9715857-9716022:1:exon
so has part: feature:9735839-9736011:1:exon
so has part: feature:9737169-9737292:1:exon
so has part: feature:9738348-9738465:1:exon
so has part: feature:9742662-9742802:1:exon
so has part: feature:9744722-9744819:1:exon
so has part: feature:9762902-9763014:1:exon
so has part: feature:9765730-9765884:1:exon
so has part: feature:9809401-9810740:1:exon

position:9431820:1
position: 9431820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9431820-9431830:1:exon

position:9431830:1
position: 9431830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9443982-9444045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9462043-9462252:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9464505-9464549:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9488633-9488751:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9491133-9491249:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9569325-9569375:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9580816-9580895:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9609579-9609690:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9616026-9616098:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9630233-9630380:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9663373-9663503:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9663884-9663988:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9672174-9672282:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9687541-9687718:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9699726-9699929:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9715857-9716022:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9735839-9736011:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9737169-9737292:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9738348-9738465:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9742662-9742802:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9744722-9744819:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9762902-9763014:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9765730-9765884:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9809401-9810740:1:exon

Inpp4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 4-phosphatase type II isoform X2
translation: MEIKEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLEFILACKDLVAPVSDRKLNTVVQISVIHPVEQTLTRYSSTEIVEGTKDPLFLTGVTFPSDYPIYEETRIKLTVYDVKDKSHDTIRTSVLPEHKDPPPEVARSFLGCASFKVGELLKSKEQLLSLSLRTSDGGKVVGTIEVSLMRMGEIEDGDTDHITTDVPGQKCALVYESTAPESLSGKENLPFLNAVLRNPVYKLYRFPTSDNKWMRIREQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMQVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPENTTKAKEVLSSINQLQPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFKDQLVRSALLALYTARPGGILKKSPSPKVSTEKKTTEDDTPQLRRQDSIPHHSDYDEEEWDRVWANVGKSLNCIIAKVDKLIERDSHNEEGAGGGSSKDGDTDPTQEDSITSHPREDWYEQLHPLILTLKECMGEVVSRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALSGLVCGFIIKLHTSLHDPGFLQQLHTVGLIAQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREHYVVEVKLPATVFESLPLQIKEGQLLHVYPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIFMEKMPPDYISRFQEQNDLKGLLDNLHQNIQAKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHKDFFIRALDCMRREGCRIENVLKNVKCRRYAFNMIQLLAFPKCYRPPEGTYGKADT
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(9462162..9462252,9464505..9464549,9488633..9488751,9491133..9491249,9569325..9569375,9580816..9580895,9609579..9609690,9616026..9616098,9630233..9630380,9663373..9663503,9663884..9663988,9672174..9672282,9687541..9687718,9699726..9699929,9715857..9716022,9735839..9736011,9737169..9737292,9738348..9738465,9742662..9742802,9744722..9744819,9762902..9763014,9765730..9765884,9810783..9810915)
location: region:9462162-9810915:1
so has part: feature:9462162-9462252:1:exon
so has part: feature:9464505-9464549:1:exon
so has part: feature:9488633-9488751:1:exon
so has part: feature:9491133-9491249:1:exon
so has part: feature:9569325-9569375:1:exon
so has part: feature:9580816-9580895:1:exon
so has part: feature:9609579-9609690:1:exon
so has part: feature:9616026-9616098:1:exon
so has part: feature:9630233-9630380:1:exon
so has part: feature:9663373-9663503:1:exon
so has part: feature:9663884-9663988:1:exon
so has part: feature:9672174-9672282:1:exon
so has part: feature:9687541-9687718:1:exon
so has part: feature:9699726-9699929:1:exon
so has part: feature:9715857-9716022:1:exon
so has part: feature:9735839-9736011:1:exon
so has part: feature:9737169-9737292:1:exon
so has part: feature:9738348-9738465:1:exon
so has part: feature:9742662-9742802:1:exon
so has part: feature:9744722-9744819:1:exon
so has part: feature:9762902-9763014:1:exon
so has part: feature:9765730-9765884:1:exon
so has part: feature:9810783-9810915:1:exon

XP_034378244.1
type: Protein
SIO_000068: ncbiprotein

position:9462162:1
position: 9462162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9810915:1
position: 9810915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9462162-9462252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9464505-9464549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9488633-9488751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9491133-9491249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9569325-9569375:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9580816-9580895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9609579-9609690:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9616026-9616098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9630233-9630380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9663373-9663503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9663884-9663988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9672174-9672282:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9687541-9687718:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9699726-9699929:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9715857-9716022:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9735839-9736011:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9737169-9737292:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9738348-9738465:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9742662-9742802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9744722-9744819:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9762902-9763014:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9765730-9765884:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9810783-9810915:1:exon

Inpp4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 4-phosphatase type II isoform X1
translation: MEIKEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLEFILACKDLVAPVSDRKLNTVVQISVIHPVEQTLTRYSSTEIVEGTKDPLFLTGVTFPSDYPIYEETRIKLTVYDVKDKSHDTIRTSVLPEHKDPPPEVARSFLGCASFKVGELLKSKEQLLSLSLRTSDGGKVVGTIEVSLMRMGEIEDGDTDHITTDVPGQKCALVYESTAPESLSGKENLPFLNAVLRNPVYKLYRFPTSDNKWMRIREQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMQVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPENTTKAKEVLSSINQLQPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFKDQLVRSALLALYTARPGGILKKSPSPKVSTEKKTTEDDTPQLRRQDSIPHHSDYDEEEWDRVWANVGKSLNCIIAKVDKLIERDSHNEEGAGGGSSKDGDTDPTQEDSITSHPREDWYEQLHPLILTLKECMGEVVSRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALSGLVCGFIIKLHTSLHDPGFLQQLHTVGLIAQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREHYVVEVKLPATVFESLPLQIKEGQLLHVYPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIFMEKMPPDYISRFQEQNDLKGLLDNLHQNIQAKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHKDFFIRALDCMRSRQTQGALNESDDPETGCLTDNKPTSRHFYPVALLLVSSHLLVVWLILSLALLLAKYQ
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(9462162..9462252,9464505..9464549,9488633..9488751,9491133..9491249,9569325..9569375,9580816..9580895,9609579..9609690,9616026..9616098,9630233..9630380,9663373..9663503,9663884..9663988,9672174..9672282,9687541..9687718,9699726..9699929,9715857..9716022,9735839..9736011,9737169..9737292,9738348..9738465,9742662..9742802,9744722..9744819,9762902..9763014,9765730..9765884,9809401..9809575)
location: region:9462162-9809575:1
so has part: feature:9462162-9462252:1:exon
so has part: feature:9464505-9464549:1:exon
so has part: feature:9488633-9488751:1:exon
so has part: feature:9491133-9491249:1:exon
so has part: feature:9569325-9569375:1:exon
so has part: feature:9580816-9580895:1:exon
so has part: feature:9609579-9609690:1:exon
so has part: feature:9616026-9616098:1:exon
so has part: feature:9630233-9630380:1:exon
so has part: feature:9663373-9663503:1:exon
so has part: feature:9663884-9663988:1:exon
so has part: feature:9672174-9672282:1:exon
so has part: feature:9687541-9687718:1:exon
so has part: feature:9699726-9699929:1:exon
so has part: feature:9715857-9716022:1:exon
so has part: feature:9735839-9736011:1:exon
so has part: feature:9737169-9737292:1:exon
so has part: feature:9738348-9738465:1:exon
so has part: feature:9742662-9742802:1:exon
so has part: feature:9744722-9744819:1:exon
so has part: feature:9762902-9763014:1:exon
so has part: feature:9765730-9765884:1:exon
so has part: feature:9809401-9809575:1:exon

XP_034378242.1
type: Protein
SIO_000068: ncbiprotein

position:9809575:1
position: 9809575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9462162-9462252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9464505-9464549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9488633-9488751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9491133-9491249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9569325-9569375:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9580816-9580895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9609579-9609690:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9616026-9616098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9630233-9630380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9663373-9663503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9663884-9663988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9672174-9672282:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9687541-9687718:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9699726-9699929:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9715857-9716022:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9735839-9736011:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9737169-9737292:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9738348-9738465:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9742662-9742802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9744722-9744819:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9762902-9763014:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9765730-9765884:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9809401-9809575:1:exon

Inpp4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Inpp4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 4-phosphatase type II isoform X1
translation: MEIKEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLEFILACKDLVAPVSDRKLNTVVQISVIHPVEQTLTRYSSTEIVEGTKDPLFLTGVTFPSDYPIYEETRIKLTVYDVKDKSHDTIRTSVLPEHKDPPPEVARSFLGCASFKVGELLKSKEQLLSLSLRTSDGGKVVGTIEVSLMRMGEIEDGDTDHITTDVPGQKCALVYESTAPESLSGKENLPFLNAVLRNPVYKLYRFPTSDNKWMRIREQMSESILSFHIPKELISLHIKEDLCRNQELKELGDLSPHWDNLRKNVLSHCDQMVTMYQDILTELSKETGSSFKSSSSKGEKTLEFVPVNLHLQRMQVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETERRNTGYQFIYYSPENTTKAKEVLSSINQLQPLIATHADLLLTSASQRSPDSLKSSLKLLSEKTELFVHAFKDQLVRSALLALYTARPGGILKKSPSPKVSTEKKTTEDDTPQLRRQDSIPHHSDYDEEEWDRVWANVGKSLNCIIAKVDKLIERDSHNEEGAGGGSSKDGDTDPTQEDSITSHPREDWYEQLHPLILTLKECMGEVVSRAKQSLTFVLLQELAYSLPQCLMLTLRRDIVFSQALSGLVCGFIIKLHTSLHDPGFLQQLHTVGLIAQYEGLLSTYSDEIGMLEDMAVGISDLRKVAFKITEATSNDVLPVLTGRREHYVVEVKLPATVFESLPLQIKEGQLLHVYPVLFNVGINEQQTLAERFGDVSLQESINQENFELVQEYYSIFMEKMPPDYISRFQEQNDLKGLLDNLHQNIQAKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLEQCSILRDEHQLHKDFFIRALDCMRSRQTQGALNESDDPETGCLTDNKPTSRHFYPVALLLVSSHLLVVWLILSLALLLAKYQ
SIO_010081: Inpp4b
subclass of: SO_0000673
so part of: Inpp4b
location: join(9462162..9462252,9464505..9464549,9488633..9488751,9491133..9491249,9569325..9569375,9580816..9580895,9609579..9609690,9616026..9616098,9630233..9630380,9663373..9663503,9663884..9663988,9672174..9672282,9687541..9687718,9699726..9699929,9715857..9716022,9735839..9736011,9737169..9737292,9738348..9738465,9742662..9742802,9744722..9744819,9762902..9763014,9765730..9765884,9809401..9809575)
location: region:9462162-9809575:1
so has part: feature:9462162-9462252:1:exon
so has part: feature:9464505-9464549:1:exon
so has part: feature:9488633-9488751:1:exon
so has part: feature:9491133-9491249:1:exon
so has part: feature:9569325-9569375:1:exon
so has part: feature:9580816-9580895:1:exon
so has part: feature:9609579-9609690:1:exon
so has part: feature:9616026-9616098:1:exon
so has part: feature:9630233-9630380:1:exon
so has part: feature:9663373-9663503:1:exon
so has part: feature:9663884-9663988:1:exon
so has part: feature:9672174-9672282:1:exon
so has part: feature:9687541-9687718:1:exon
so has part: feature:9699726-9699929:1:exon
so has part: feature:9715857-9716022:1:exon
so has part: feature:9735839-9736011:1:exon
so has part: feature:9737169-9737292:1:exon
so has part: feature:9738348-9738465:1:exon
so has part: feature:9742662-9742802:1:exon
so has part: feature:9744722-9744819:1:exon
so has part: feature:9762902-9763014:1:exon
so has part: feature:9765730-9765884:1:exon
so has part: feature:9809401-9809575:1:exon

XP_034378243.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9462162-9462252:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9464505-9464549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9488633-9488751:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9491133-9491249:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9569325-9569375:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9580816-9580895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9609579-9609690:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9616026-9616098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9630233-9630380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9663373-9663503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9663884-9663988:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9672174-9672282:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9687541-9687718:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9699726-9699929:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9715857-9716022:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9735839-9736011:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9737169-9737292:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9738348-9738465:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9742662-9742802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9744722-9744819:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9762902-9763014:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9765730-9765884:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9809401-9809575:1:exon

LOC117723060
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9544523..9545432
location: region:9544523-9545432:1
so has part: feature:9544523-9545432:1:exon

117723060
type: Gene
SIO_000068: ncbigene

position:9544523:1
position: 9544523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9545432:1
position: 9545432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9544523-9545432:1:exon

LOC117723060
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723060
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC117723060
subclass of: SO_0000673
so part of: LOC117723060
location: 9544523..9545265
location: region:9544523-9545265:1
so has part: feature:9544523-9545265:1:exon

position:9545265:1
position: 9545265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9544523-9545265:1:exon

LOC117723060
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723060
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC117723060
subclass of: SO_0000673
so part of: LOC117723060
location: 9545407..9545432
location: region:9545407-9545432:1
so has part: feature:9545407-9545432:1:exon

position:9545407:1
position: 9545407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9545407-9545432:1:exon

LOC117723428
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9571852..9578128)
location: region:9571852-9578128:-1
so has part: feature:9571852-9578128:-1:exon

117723428
type: Gene
SIO_000068: ncbigene

position:9571852:-1
position: 9571852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9578128:-1
position: 9578128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9571852-9578128:-1:exon

LOC117723428
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723428
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723428
subclass of: SO_0000673
so part of: LOC117723428
location: complement(9571852..9572240)
location: region:9571852-9572240:-1
so has part: feature:9571852-9572240:-1:exon

position:9572240:-1
position: 9572240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9571852-9572240:-1:exon

LOC117723428
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723428
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723428
subclass of: SO_0000673
so part of: LOC117723428
location: complement(9578033..9578128)
location: region:9578033-9578128:-1
so has part: feature:9578033-9578128:-1:exon

position:9578033:-1
position: 9578033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9578033-9578128:-1:exon

LOC117723450
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723450
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9851328..9860614
location: region:9851328-9860614:1
so has part: feature:9851328-9860614:1:exon

117723450
type: Gene
SIO_000068: ncbigene

position:9851328:1
position: 9851328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9860614:1
position: 9860614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9851328-9860614:1:exon

LOC117723450
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723450
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723450
subclass of: SO_0000673
so part of: LOC117723450
location: 9851328..9851410
location: region:9851328-9851410:1
so has part: feature:9851328-9851410:1:exon

position:9851410:1
position: 9851410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9851328-9851410:1:exon

LOC117723450
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723450
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117723450
subclass of: SO_0000673
so part of: LOC117723450
location: 9859290..9860614
location: region:9859290-9860614:1
so has part: feature:9859290-9860614:1:exon

position:9859290:1
position: 9859290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9859290-9860614:1:exon

LOC117723564
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723564
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(9889422..9889565)
location: region:9889422-9889565:-1
so has part: feature:9889422-9889565:-1:exon
subclass of: SO_0000578

117723564
type: Gene
SIO_000068: ncbigene

position:9889422:-1
position: 9889422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9889565:-1
position: 9889565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9889422-9889565:-1:exon

LOC117723564
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117723564
product: small nucleolar RNA SNORA48
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00554
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608674.1
SIO_010081: LOC117723564
subclass of: SO_0000673
so part of: LOC117723564
location: complement(9889422..9889565)
location: region:9889422-9889565:-1
so has part: feature:9889422-9889565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9889422-9889565:-1:exon

Il15
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9980827..10044760)
location: region:9980827-10044760:-1
so has part: feature:9980827-10044760:-1:exon
subclass of: SO_0000010

117723173
type: Gene
SIO_000068: ncbigene

position:9980827:-1
position: 9980827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10044760:-1
position: 10044760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9980827-10044760:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Il15
product: interleukin 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034522623.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9980827..9981227,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993959,10023404..10023525,10044077..10044760))
location: region:9980827-10044760:-1
so has part: feature:10044077-10044760:-1:exon
so has part: feature:10023404-10023525:-1:exon
so has part: feature:9993861-9993959:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9980827-9981227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10044077-10044760:-1:exon

position:10044077:-1
position: 10044077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10023404-10023525:-1:exon

position:10023404:-1
position: 10023404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10023525:-1
position: 10023525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9993861-9993959:-1:exon

position:9993861:-1
position: 9993861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9993959:-1
position: 9993959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9992612-9992709:-1:exon

position:9992612:-1
position: 9992612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9992709:-1
position: 9992709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9991556-9991640:-1:exon

position:9991556:-1
position: 9991556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9991640:-1
position: 9991640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9986141-9986185:-1:exon

position:9986141:-1
position: 9986141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9986185:-1
position: 9986185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9983732-9983869:-1:exon

position:9983732:-1
position: 9983732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9983869:-1
position: 9983869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9980827-9981227:-1:exon

position:9981227:-1
position: 9981227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Il15
product: interleukin 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522624.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9980827..9981227,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993959,10023404..10023525,10026519..10026566))
location: region:9980827-10026566:-1
so has part: feature:10026519-10026566:-1:exon
so has part: feature:10023404-10023525:-1:exon
so has part: feature:9993861-9993959:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9980827-9981227:-1:exon

position:10026566:-1
position: 10026566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10026519-10026566:-1:exon

position:10026519:-1
position: 10026519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10023404-10023525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9993861-9993959:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9983732-9983869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9980827-9981227:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Il15
product: interleukin 15, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034522626.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9980835..9981227,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993959,10044077..10044760))
location: region:9980835-10044760:-1
so has part: feature:10044077-10044760:-1:exon
so has part: feature:9993861-9993959:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9980835-9981227:-1:exon

position:9980835:-1
position: 9980835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10044077-10044760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9993861-9993959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9983732-9983869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9980835-9981227:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Il15
product: interleukin 15, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034522627.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9980835..9981227,9983732..9983821,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993959,10023404..10023525,10044077..10044760))
location: region:9980835-10044760:-1
so has part: feature:10044077-10044760:-1:exon
so has part: feature:10023404-10023525:-1:exon
so has part: feature:9993861-9993959:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983821:-1:exon
so has part: feature:9980835-9981227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10044077-10044760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10023404-10023525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9993861-9993959:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9983732-9983821:-1:exon

position:9983821:-1
position: 9983821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9980835-9981227:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Il15
product: interleukin 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522625.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9980835..9981227,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993959,10043369..10044066))
location: region:9980835-10044066:-1
so has part: feature:10043369-10044066:-1:exon
so has part: feature:9993861-9993959:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9980835-9981227:-1:exon

position:10044066:-1
position: 10044066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10043369-10044066:-1:exon

position:10043369:-1
position: 10043369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9993861-9993959:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9983732-9983869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9980835-9981227:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X2
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVGLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHVILHEYSNMTLSETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQNFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9981117..9981227,9983732..9983821,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993872))
location: region:9981117-9993872:-1
so has part: feature:9993861-9993872:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983821:-1:exon
so has part: feature:9981117-9981227:-1:exon

XP_034378518.1
type: Protein
SIO_000068: ncbiprotein

position:9981117:-1
position: 9981117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9993872:-1
position: 9993872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9993861-9993872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9983732-9983821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9981117-9981227:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X1
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVGLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLSETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQNFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9981117..9981227,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993872))
location: region:9981117-9993872:-1
so has part: feature:9993861-9993872:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9981117-9981227:-1:exon

XP_034378514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9993861-9993872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9983732-9983869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9981117-9981227:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X1
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVGLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLSETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQNFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9981117..9981227,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993872))
location: region:9981117-9993872:-1
so has part: feature:9993861-9993872:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9981117-9981227:-1:exon

XP_034378515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9993861-9993872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9983732-9983869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9981117-9981227:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X1
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVGLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLSETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQNFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9981117..9981227,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993872))
location: region:9981117-9993872:-1
so has part: feature:9993861-9993872:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9981117-9981227:-1:exon

XP_034378516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9993861-9993872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9983732-9983869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9981117-9981227:-1:exon

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X1
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVGLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLSETVRNVLYLANSTLSSNKNVAESGCKECEELEEKTFTEFLQNFIRIVQMFINTS
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9981117..9981227,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993872))
location: region:9981117-9993872:-1
so has part: feature:9993861-9993872:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9981117-9981227:-1:exon

XP_034378517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9993861-9993872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9983732-9983869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9981117-9981227:-1:exon

Il15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Il15
product: interleukin 15, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522628.1
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9983255..9983309,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993959,10023404..10023525,10044077..10044760))
location: region:9983255-10044760:-1
so has part: feature:10044077-10044760:-1:exon
so has part: feature:10023404-10023525:-1:exon
so has part: feature:9993861-9993959:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9983255-9983309:-1:exon

position:9983255:-1
position: 9983255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10044077-10044760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10023404-10023525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9993861-9993959:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9983732-9983869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9983255-9983309:-1:exon

position:9983309:-1
position: 9983309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Il15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Il15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-15 isoform X3
translation: MKILKPYMRNTSISCYLCFLLNSHFLTEAGIHVFILGCVSVGLPKTEANWIDVRYDLEKIESLIQSIHIDTTLYTDSDFHPSCKVTAMNCFLLELQVILHEYSNMTLSETVRNVLYLANSTLSSNKLSPYLFEC
SIO_010081: Il15
subclass of: SO_0000673
so part of: Il15
location: complement(join(9983283..9983309,9983732..9983869,9986141..9986185,9991556..9991640,9992612..9992709,9993861..9993872))
location: region:9983283-9993872:-1
so has part: feature:9993861-9993872:-1:exon
so has part: feature:9992612-9992709:-1:exon
so has part: feature:9991556-9991640:-1:exon
so has part: feature:9986141-9986185:-1:exon
so has part: feature:9983732-9983869:-1:exon
so has part: feature:9983283-9983309:-1:exon

XP_034378519.1
type: Protein
SIO_000068: ncbiprotein

position:9983283:-1
position: 9983283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9993861-9993872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9992612-9992709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9991556-9991640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9986141-9986185:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9983732-9983869:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9983283-9983309:-1:exon

LOC117723451
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723451
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10202126..10202935
location: region:10202126-10202935:1
so has part: feature:10202126-10202935:1:exon

117723451
type: Gene
SIO_000068: ncbigene

position:10202126:1
position: 10202126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10202935:1
position: 10202935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10202126-10202935:1:exon

LOC117723451
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723451
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC117723451
subclass of: SO_0000673
so part of: LOC117723451
location: 10202126..10202192
location: region:10202126-10202192:1
so has part: feature:10202126-10202192:1:exon

position:10202192:1
position: 10202192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10202126-10202192:1:exon

LOC117723451
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723451
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC117723451
subclass of: SO_0000673
so part of: LOC117723451
location: 10202248..10202935
location: region:10202248-10202935:1
so has part: feature:10202248-10202935:1:exon

position:10202248:1
position: 10202248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10202248-10202935:1:exon

Znf330
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Znf330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10370364..10381058)
location: region:10370364-10381058:-1
so has part: feature:10370364-10381058:-1:exon
subclass of: SO_0000010

117723274
type: Gene
SIO_000068: ncbigene

position:10370364:-1
position: 10370364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10381058:-1
position: 10381058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10370364-10381058:-1:exon

Znf330
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf330
product: zinc finger protein 330
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 4 long SRA reads, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522779.1
SIO_010081: Znf330
subclass of: SO_0000673
so part of: Znf330
location: complement(join(10370364..10371261,10371662..10371779,10372885..10372931,10373975..10374079,10374487..10374613,10376632..10376711,10378178..10378248,10378731..10378750,10379780..10379911,10380936..10381058))
location: region:10370364-10381058:-1
so has part: feature:10380936-10381058:-1:exon
so has part: feature:10379780-10379911:-1:exon
so has part: feature:10378731-10378750:-1:exon
so has part: feature:10378178-10378248:-1:exon
so has part: feature:10376632-10376711:-1:exon
so has part: feature:10374487-10374613:-1:exon
so has part: feature:10373975-10374079:-1:exon
so has part: feature:10372885-10372931:-1:exon
so has part: feature:10371662-10371779:-1:exon
so has part: feature:10370364-10371261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10380936-10381058:-1:exon

position:10380936:-1
position: 10380936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10379780-10379911:-1:exon

position:10379780:-1
position: 10379780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10379911:-1
position: 10379911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10378731-10378750:-1:exon

position:10378731:-1
position: 10378731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10378750:-1
position: 10378750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10378178-10378248:-1:exon

position:10378178:-1
position: 10378178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10378248:-1
position: 10378248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10376632-10376711:-1:exon

position:10376632:-1
position: 10376632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10376711:-1
position: 10376711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10374487-10374613:-1:exon

position:10374487:-1
position: 10374487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10374613:-1
position: 10374613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10373975-10374079:-1:exon

position:10373975:-1
position: 10373975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10374079:-1
position: 10374079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10372885-10372931:-1:exon

position:10372885:-1
position: 10372885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10372931:-1
position: 10372931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10371662-10371779:-1:exon

position:10371662:-1
position: 10371662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10371779:-1
position: 10371779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10370364-10371261:-1:exon

position:10371261:-1
position: 10371261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Znf330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf330
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 330
translation: MPKKKTGARKKAENRREREKQLRASRSTVDLARHPCNASMECDKCQRRQKNRAFCYFCNSVQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICDFCEAWVCHGRKCLSTHACACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFEHQASCQVLEAETFKCVSCNRLGQHSCLRCKACFCDEHTRSKVFKQEKGKQPPCPKCGHETQETKDLSMSTRSLKFGRQTGGEEGDGASGYDSYWKNLSSDKYGDAGCHDDDDEDEAEDEEDEDDGKDSDAESSDLFNNLNLGRTYASGYAHYEEQEN
SIO_010081: Znf330
subclass of: SO_0000673
so part of: Znf330
location: complement(join(10370996..10371261,10371662..10371779,10372885..10372931,10373975..10374079,10374487..10374613,10376632..10376711,10378178..10378248,10378731..10378750,10379780..10379899))
location: region:10370996-10379899:-1
so has part: feature:10379780-10379899:-1:exon
so has part: feature:10378731-10378750:-1:exon
so has part: feature:10378178-10378248:-1:exon
so has part: feature:10376632-10376711:-1:exon
so has part: feature:10374487-10374613:-1:exon
so has part: feature:10373975-10374079:-1:exon
so has part: feature:10372885-10372931:-1:exon
so has part: feature:10371662-10371779:-1:exon
so has part: feature:10370996-10371261:-1:exon

XP_034378670.1
type: Protein
SIO_000068: ncbiprotein

position:10370996:-1
position: 10370996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10379899:-1
position: 10379899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10379780-10379899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10378731-10378750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10378178-10378248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10376632-10376711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10374487-10374613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10373975-10374079:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10372885-10372931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10371662-10371779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10370996-10371261:-1:exon

Rnf150
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Rnf150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10463252..10674723
location: region:10463252-10674723:1
so has part: feature:10463252-10674723:1:exon
subclass of: SO_0000010

117723221
type: Gene
SIO_000068: ncbigene

position:10463252:1
position: 10463252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10674723:1
position: 10674723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10463252-10674723:1:exon

Rnf150
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rnf150
product: ring finger protein 150
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034522697.1
SIO_010081: Rnf150
subclass of: SO_0000673
so part of: Rnf150
location: join(10463252..10463995,10592479..10592729,10603699..10603770,10605930..10606012,10622381..10622477,10628985..10629198,10672078..10674723)
location: region:10463252-10674723:1
so has part: feature:10463252-10463995:1:exon
so has part: feature:10592479-10592729:1:exon
so has part: feature:10603699-10603770:1:exon
so has part: feature:10605930-10606012:1:exon
so has part: feature:10622381-10622477:1:exon
so has part: feature:10628985-10629198:1:exon
so has part: feature:10672078-10674723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10463252-10463995:1:exon

position:10463995:1
position: 10463995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10592479-10592729:1:exon

position:10592479:1
position: 10592479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10592729:1
position: 10592729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10603699-10603770:1:exon

position:10603699:1
position: 10603699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10603770:1
position: 10603770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10605930-10606012:1:exon

position:10605930:1
position: 10605930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10606012:1
position: 10606012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10622381-10622477:1:exon

position:10622381:1
position: 10622381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10622477:1
position: 10622477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10628985-10629198:1:exon

position:10628985:1
position: 10628985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10629198:1
position: 10629198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10672078-10674723:1:exon

position:10672078:1
position: 10672078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rnf150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rnf150
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 150
translation: MTMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYTDPEPGAAVAGGGGGAELHTEKSECGRYGEHSPKQDARGEVVMASSAHDRLACDPNTKFAAPANGKHWIALIPKGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPKGKEIASLLERNVTVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPPNADCMDDLPIDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQVVQDPDPAPQEGEAIFTTTNSDQEPAVSSDSDISLIMALEVGLSDVELSTDQDCEEVKS
SIO_010081: Rnf150
subclass of: SO_0000673
so part of: Rnf150
location: join(10463515..10463995,10592479..10592729,10603699..10603770,10605930..10606012,10622381..10622477,10628985..10629198,10672078..10672196)
location: region:10463515-10672196:1
so has part: feature:10463515-10463995:1:exon
so has part: feature:10592479-10592729:1:exon
so has part: feature:10603699-10603770:1:exon
so has part: feature:10605930-10606012:1:exon
so has part: feature:10622381-10622477:1:exon
so has part: feature:10628985-10629198:1:exon
so has part: feature:10672078-10672196:1:exon

XP_034378588.1
type: Protein
SIO_000068: ncbiprotein

position:10463515:1
position: 10463515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10672196:1
position: 10672196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10463515-10463995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10592479-10592729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10603699-10603770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10605930-10606012:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10622381-10622477:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10628985-10629198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10672078-10672196:1:exon

LOC117723452
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723452
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10723362..10724031)
location: region:10723362-10724031:-1
so has part: feature:10723362-10724031:-1:exon

117723452
type: Gene
SIO_000068: ncbigene

position:10723362:-1
position: 10723362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10724031:-1
position: 10724031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10723362-10724031:-1:exon

LOC117723452
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723452
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117723452
subclass of: SO_0000673
so part of: LOC117723452
location: complement(10723362..10723645)
location: region:10723362-10723645:-1
so has part: feature:10723362-10723645:-1:exon

position:10723645:-1
position: 10723645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10723362-10723645:-1:exon

LOC117723452
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723452
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117723452
subclass of: SO_0000673
so part of: LOC117723452
location: complement(10723792..10724031)
location: region:10723792-10724031:-1
so has part: feature:10723792-10724031:-1:exon

position:10723792:-1
position: 10723792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10723792-10724031:-1:exon

Tbc1d9
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tbc1d9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10739007..10841231
location: region:10739007-10841231:1
so has part: feature:10739007-10841231:1:exon
subclass of: SO_0000010

117723077
type: Gene
SIO_000068: ncbigene

position:10739007:1
position: 10739007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10841231:1
position: 10841231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10739007-10841231:1:exon

Tbc1d9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tbc1d9
product: TBC1 domain family member 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 long SRA read, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034522473.1
SIO_010081: Tbc1d9
subclass of: SO_0000673
so part of: Tbc1d9
location: join(10739007..10739396,10780121..10780231,10790703..10790821,10803437..10803665,10804077..10804338,10806468..10806675,10809913..10810119,10811730..10811900,10813216..10813366,10817958..10818172,10821603..10821720,10822771..10823056,10823923..10824052,10827322..10827420,10827599..10827667,10829696..10829936,10832871..10832936,10834432..10834518,10837151..10837225,10837309..10837412,10839158..10841231)
location: region:10739007-10841231:1
so has part: feature:10739007-10739396:1:exon
so has part: feature:10780121-10780231:1:exon
so has part: feature:10790703-10790821:1:exon
so has part: feature:10803437-10803665:1:exon
so has part: feature:10804077-10804338:1:exon
so has part: feature:10806468-10806675:1:exon
so has part: feature:10809913-10810119:1:exon
so has part: feature:10811730-10811900:1:exon
so has part: feature:10813216-10813366:1:exon
so has part: feature:10817958-10818172:1:exon
so has part: feature:10821603-10821720:1:exon
so has part: feature:10822771-10823056:1:exon
so has part: feature:10823923-10824052:1:exon
so has part: feature:10827322-10827420:1:exon
so has part: feature:10827599-10827667:1:exon
so has part: feature:10829696-10829936:1:exon
so has part: feature:10832871-10832936:1:exon
so has part: feature:10834432-10834518:1:exon
so has part: feature:10837151-10837225:1:exon
so has part: feature:10837309-10837412:1:exon
so has part: feature:10839158-10841231:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10739007-10739396:1:exon

position:10739396:1
position: 10739396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10780121-10780231:1:exon

position:10780121:1
position: 10780121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10780231:1
position: 10780231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10790703-10790821:1:exon

position:10790703:1
position: 10790703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10790821:1
position: 10790821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10803437-10803665:1:exon

position:10803437:1
position: 10803437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10803665:1
position: 10803665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10804077-10804338:1:exon

position:10804077:1
position: 10804077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10804338:1
position: 10804338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10806468-10806675:1:exon

position:10806468:1
position: 10806468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10806675:1
position: 10806675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10809913-10810119:1:exon

position:10809913:1
position: 10809913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10810119:1
position: 10810119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10811730-10811900:1:exon

position:10811730:1
position: 10811730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10811900:1
position: 10811900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10813216-10813366:1:exon

position:10813216:1
position: 10813216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10813366:1
position: 10813366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10817958-10818172:1:exon

position:10817958:1
position: 10817958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10818172:1
position: 10818172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10821603-10821720:1:exon

position:10821603:1
position: 10821603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10821720:1
position: 10821720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10822771-10823056:1:exon

position:10822771:1
position: 10822771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10823056:1
position: 10823056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10823923-10824052:1:exon

position:10823923:1
position: 10823923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10824052:1
position: 10824052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10827322-10827420:1:exon

position:10827322:1
position: 10827322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10827420:1
position: 10827420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10827599-10827667:1:exon

position:10827599:1
position: 10827599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10827667:1
position: 10827667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10829696-10829936:1:exon

position:10829696:1
position: 10829696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10829936:1
position: 10829936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:10832871-10832936:1:exon

position:10832871:1
position: 10832871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10832936:1
position: 10832936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10834432-10834518:1:exon

position:10834432:1
position: 10834432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10834518:1
position: 10834518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:10837151-10837225:1:exon

position:10837151:1
position: 10837151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10837225:1
position: 10837225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:10837309-10837412:1:exon

position:10837309:1
position: 10837309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10837412:1
position: 10837412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:10839158-10841231:1:exon

position:10839158:1
position: 10839158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tbc1d9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tbc1d9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 9 isoform X2
translation: MWVNPEEVLLANALWITERANPYFILQRRKGHGGDGGGGGGLAGLLVGTLDVVLDSSARVAPYRILYQTPDSLVYWTIACGGSRKEVTEHWEWLEQNLLQTLSIFENENDVTTFVRGKIQGIIAEYNKINDVKEDEDTEKFKEAIVKFHRLFGMPEEEKLVNYYSCSYWKGKVPRQGWMYLSINHLCFSSFLMGREAKLVIRWVDITQLEKNATLLLPDVIKVSTRSSEHFFSVFLNINETFKLMEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFRLPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEENLCSLIIPLREVTIVEKADSCSVLPSPLSISTRNRMTFLFANLKDRDFLVQRISDFLQQTTSRIYSDKEFSGSCNSSDDEVYSRPSSLVSSSPQRSTSSDADGERPFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLAKEFLKEQAWKIHFAEYGQGICMYRTEKTRELVLKGIPESMRGELWLLLSGAINEKATHPGYYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVGPYPAVDIFRLIGTSYEKFGTIRADLIEQMRFKQRLKVIQTLEDTTKRNVVRTIVTETSFTIDELEELYALFKAEHLTSCYWGGSSNALDRHDPSLPYLEQYRIDFEQFKGMFVLLFPWACGTHSDVLASRLFQLLDENGDSLINFREFVSGLSAACHGDLTEKLKLLYKMHVLPEPSCDQDEPDSAFEATQYFFEDITPECTHVVGLDSRGKPSAEDGFVTVSLKQDRGKRANSQENRNYLKLWTAENKSKSKNAKDLPKLNQGQFIELCKTMYNMFSEDPNEQELYHATAAVTSLLLEIGEVGKFFITQPSKEDAVPGPPCSQAIPGMLFPKKEPNQSYVVGSAEPLTAGLAVDSEEHSLGGQMEDIKLEDSSPRDNGACSSMLISDDDTKDDSSMSSYSVLSAGSHEEDKLHCEDIGEDTVLVRSSQGRATLPRSSSLDRDWAITFEQFLASLLTEPALVKYFDKPVCMMARVTSAKNTRMMGKPLTSASDYEISALSG
SIO_010081: Tbc1d9
subclass of: SO_0000673
so part of: Tbc1d9
location: join(10739267..10739396,10780121..10780231,10790703..10790821,10803437..10803665,10804077..10804338,10806468..10806675,10809913..10810119,10811730..10811900,10813216..10813366,10817958..10818172,10821603..10821720,10822771..10823056,10823923..10824052,10827322..10827420,10827599..10827667,10829696..10829936,10832871..10832936,10834432..10834518,10837151..10837225,10837309..10837412,10839158..10839874)
location: region:10739267-10839874:1
so has part: feature:10739267-10739396:1:exon
so has part: feature:10780121-10780231:1:exon
so has part: feature:10790703-10790821:1:exon
so has part: feature:10803437-10803665:1:exon
so has part: feature:10804077-10804338:1:exon
so has part: feature:10806468-10806675:1:exon
so has part: feature:10809913-10810119:1:exon
so has part: feature:10811730-10811900:1:exon
so has part: feature:10813216-10813366:1:exon
so has part: feature:10817958-10818172:1:exon
so has part: feature:10821603-10821720:1:exon
so has part: feature:10822771-10823056:1:exon
so has part: feature:10823923-10824052:1:exon
so has part: feature:10827322-10827420:1:exon
so has part: feature:10827599-10827667:1:exon
so has part: feature:10829696-10829936:1:exon
so has part: feature:10832871-10832936:1:exon
so has part: feature:10834432-10834518:1:exon
so has part: feature:10837151-10837225:1:exon
so has part: feature:10837309-10837412:1:exon
so has part: feature:10839158-10839874:1:exon

XP_034378364.1
type: Protein
SIO_000068: ncbiprotein

position:10739267:1
position: 10739267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10839874:1
position: 10839874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10739267-10739396:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10780121-10780231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10790703-10790821:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10803437-10803665:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10804077-10804338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10806468-10806675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10809913-10810119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10811730-10811900:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10813216-10813366:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10817958-10818172:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10821603-10821720:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10822771-10823056:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10823923-10824052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10827322-10827420:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10827599-10827667:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10829696-10829936:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10832871-10832936:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10834432-10834518:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10837151-10837225:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10837309-10837412:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10839158-10839874:1:exon

Tbc1d9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tbc1d9
product: TBC1 domain family member 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034522472.1
SIO_010081: Tbc1d9
subclass of: SO_0000673
so part of: Tbc1d9
location: join(10780178..10780231,10803437..10803665,10804077..10804338,10806468..10806675,10809913..10810119,10811730..10811900,10813216..10813366,10817958..10818172,10821603..10821720,10822771..10823056,10823923..10824052,10827322..10827420,10827599..10827667,10829696..10829936,10832871..10832936,10834432..10834518,10837151..10837225,10837309..10837412,10839158..10841231)
location: region:10780178-10841231:1
so has part: feature:10780178-10780231:1:exon
so has part: feature:10803437-10803665:1:exon
so has part: feature:10804077-10804338:1:exon
so has part: feature:10806468-10806675:1:exon
so has part: feature:10809913-10810119:1:exon
so has part: feature:10811730-10811900:1:exon
so has part: feature:10813216-10813366:1:exon
so has part: feature:10817958-10818172:1:exon
so has part: feature:10821603-10821720:1:exon
so has part: feature:10822771-10823056:1:exon
so has part: feature:10823923-10824052:1:exon
so has part: feature:10827322-10827420:1:exon
so has part: feature:10827599-10827667:1:exon
so has part: feature:10829696-10829936:1:exon
so has part: feature:10832871-10832936:1:exon
so has part: feature:10834432-10834518:1:exon
so has part: feature:10837151-10837225:1:exon
so has part: feature:10837309-10837412:1:exon
so has part: feature:10839158-10841231:1:exon

position:10780178:1
position: 10780178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10780178-10780231:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10803437-10803665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10804077-10804338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10806468-10806675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10809913-10810119:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10811730-10811900:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10813216-10813366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10817958-10818172:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10821603-10821720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10822771-10823056:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10823923-10824052:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10827322-10827420:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10827599-10827667:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10829696-10829936:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10832871-10832936:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10834432-10834518:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10837151-10837225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10837309-10837412:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10839158-10841231:1:exon

Tbc1d9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tbc1d9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 9 isoform X1
translation: MPEEEKLVNYYSCSYWKGKVPRQGWMYLSINHLCFSSFLMGREAKLVIRWVDITQLEKNATLLLPDVIKVSTRSSEHFFSVFLNINETFKLMEQLANIAMRQLLDNEGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSERYRALFRLPKDEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEENLCSLIIPLREVTIVEKADSCSVLPSPLSISTRNRMTFLFANLKDRDFLVQRISDFLQQTTSRIYSDKEFSGSCNSSDDEVYSRPSSLVSSSPQRSTSSDADGERPFNLNGNSVPTATQTLMTMYRRRSPEEFNPKLAKEFLKEQAWKIHFAEYGQGICMYRTEKTRELVLKGIPESMRGELWLLLSGAINEKATHPGYYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELARDYVPQLYDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALAVLDANVDKLLNCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVGPYPAVDIFRLIGTSYEKFGTIRADLIEQMRFKQRLKVIQTLEDTTKRNVVRTIVTETSFTIDELEELYALFKAEHLTSCYWGGSSNALDRHDPSLPYLEQYRIDFEQFKGMFVLLFPWACGTHSDVLASRLFQLLDENGDSLINFREFVSGLSAACHGDLTEKLKLLYKMHVLPEPSCDQDEPDSAFEATQYFFEDITPECTHVVGLDSRGKPSAEDGFVTVSLKQDRGKRANSQENRNYLKLWTAENKSKSKNAKDLPKLNQGQFIELCKTMYNMFSEDPNEQELYHATAAVTSLLLEIGEVGKFFITQPSKEDAVPGPPCSQAIPGMLFPKKEPNQSYVVGSAEPLTAGLAVDSEEHSLGGQMEDIKLEDSSPRDNGACSSMLISDDDTKDDSSMSSYSVLSAGSHEEDKLHCEDIGEDTVLVRSSQGRATLPRSSSLDRDWAITFEQFLASLLTEPALVKYFDKPVCMMARVTSAKNTRMMGKPLTSASDYEISALSG
SIO_010081: Tbc1d9
subclass of: SO_0000673
so part of: Tbc1d9
location: join(10803536..10803665,10804077..10804338,10806468..10806675,10809913..10810119,10811730..10811900,10813216..10813366,10817958..10818172,10821603..10821720,10822771..10823056,10823923..10824052,10827322..10827420,10827599..10827667,10829696..10829936,10832871..10832936,10834432..10834518,10837151..10837225,10837309..10837412,10839158..10839874)
location: region:10803536-10839874:1
so has part: feature:10803536-10803665:1:exon
so has part: feature:10804077-10804338:1:exon
so has part: feature:10806468-10806675:1:exon
so has part: feature:10809913-10810119:1:exon
so has part: feature:10811730-10811900:1:exon
so has part: feature:10813216-10813366:1:exon
so has part: feature:10817958-10818172:1:exon
so has part: feature:10821603-10821720:1:exon
so has part: feature:10822771-10823056:1:exon
so has part: feature:10823923-10824052:1:exon
so has part: feature:10827322-10827420:1:exon
so has part: feature:10827599-10827667:1:exon
so has part: feature:10829696-10829936:1:exon
so has part: feature:10832871-10832936:1:exon
so has part: feature:10834432-10834518:1:exon
so has part: feature:10837151-10837225:1:exon
so has part: feature:10837309-10837412:1:exon
so has part: feature:10839158-10839874:1:exon

XP_034378363.1
type: Protein
SIO_000068: ncbiprotein

position:10803536:1
position: 10803536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10803536-10803665:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10804077-10804338:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10806468-10806675:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10809913-10810119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10811730-10811900:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10813216-10813366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10817958-10818172:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10821603-10821720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10822771-10823056:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10823923-10824052:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10827322-10827420:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10827599-10827667:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10829696-10829936:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10832871-10832936:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10834432-10834518:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10837151-10837225:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10837309-10837412:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10839158-10839874:1:exon

Ucp1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10858594..10866242
location: region:10858594-10866242:1
so has part: feature:10858594-10866242:1:exon
subclass of: SO_0000010

117723178
type: Gene
SIO_000068: ncbigene

position:10858594:1
position: 10858594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10866242:1
position: 10866242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10858594-10866242:1:exon

Ucp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ucp1
product: uncoupling protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034522636.1
SIO_010081: Ucp1
subclass of: SO_0000673
so part of: Ucp1
location: join(10858594..10858955,10859615..10859813,10862365..10862565,10862659..10862760,10863564..10863744,10866052..10866242)
location: region:10858594-10866242:1
so has part: feature:10858594-10858955:1:exon
so has part: feature:10859615-10859813:1:exon
so has part: feature:10862365-10862565:1:exon
so has part: feature:10862659-10862760:1:exon
so has part: feature:10863564-10863744:1:exon
so has part: feature:10866052-10866242:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10858594-10858955:1:exon

position:10858955:1
position: 10858955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10859615-10859813:1:exon

position:10859615:1
position: 10859615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10859813:1
position: 10859813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10862365-10862565:1:exon

position:10862365:1
position: 10862365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10862565:1
position: 10862565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10862659-10862760:1:exon

position:10862659:1
position: 10862659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10862760:1
position: 10862760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10863564-10863744:1:exon

position:10863564:1
position: 10863564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10863744:1
position: 10863744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10866052-10866242:1:exon

position:10866052:1
position: 10866052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ucp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ucp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial brown fat uncoupling protein 1
translation: MVSPTTSEVQPTMGVKIFSAGVSACLADIITFPLDTAKVRLQVQGEGPASSTIRYKGVLGTITTLAKTEGFPKLYSGLPAGIQRQISFASLRIGLYDTVQEYFSSGRETPASLGNKISAGLMTGGVAVFIGQPTEVVKVRMQAQSHLHGIKPRYTGTYNAYRVIATTESLSTLWKGTTPNLMRNVIINCTELVTYDLMKGALVNNKIMADDVPCHLLSALVAGFCTTLLASPVDVVKTRFINSLPGQYPSVPSCAMTMYTKEGPTAFFKGFVPSFLRLGSWNVIMFVCFEQLKKELTKSRQTVDCTT
SIO_010081: Ucp1
subclass of: SO_0000673
so part of: Ucp1
location: join(10858830..10858955,10859615..10859813,10862365..10862565,10862659..10862760,10863564..10863744,10866052..10866166)
location: region:10858830-10866166:1
so has part: feature:10858830-10858955:1:exon
so has part: feature:10859615-10859813:1:exon
so has part: feature:10862365-10862565:1:exon
so has part: feature:10862659-10862760:1:exon
so has part: feature:10863564-10863744:1:exon
so has part: feature:10866052-10866166:1:exon

XP_034378527.1
type: Protein
SIO_000068: ncbiprotein

position:10858830:1
position: 10858830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10866166:1
position: 10866166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10858830-10858955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10859615-10859813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10862365-10862565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10862659-10862760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10863564-10863744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10866052-10866166:1:exon

Elmod2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Elmod2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10877153..10896347)
location: region:10877153-10896347:-1
so has part: feature:10877153-10896347:-1:exon
subclass of: SO_0000010

117723101
type: Gene
SIO_000068: ncbigene

position:10877153:-1
position: 10877153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10896347:-1
position: 10896347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10877153-10896347:-1:exon

Elmod2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Elmod2
product: ELMO domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522511.1
SIO_010081: Elmod2
subclass of: SO_0000673
so part of: Elmod2
location: complement(join(10877153..10880593,10880932..10881065,10881706..10881774,10883426..10883559,10886355..10886484,10887597..10887694,10891887..10891915,10894933..10895080,10896211..10896347))
location: region:10877153-10896347:-1
so has part: feature:10896211-10896347:-1:exon
so has part: feature:10894933-10895080:-1:exon
so has part: feature:10891887-10891915:-1:exon
so has part: feature:10887597-10887694:-1:exon
so has part: feature:10886355-10886484:-1:exon
so has part: feature:10883426-10883559:-1:exon
so has part: feature:10881706-10881774:-1:exon
so has part: feature:10880932-10881065:-1:exon
so has part: feature:10877153-10880593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10896211-10896347:-1:exon

position:10896211:-1
position: 10896211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10894933-10895080:-1:exon

position:10894933:-1
position: 10894933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10895080:-1
position: 10895080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10891887-10891915:-1:exon

position:10891887:-1
position: 10891887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10891915:-1
position: 10891915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10887597-10887694:-1:exon

position:10887597:-1
position: 10887597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10887694:-1
position: 10887694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10886355-10886484:-1:exon

position:10886355:-1
position: 10886355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10886484:-1
position: 10886484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10883426-10883559:-1:exon

position:10883426:-1
position: 10883426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10883559:-1
position: 10883559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10881706-10881774:-1:exon

position:10881706:-1
position: 10881706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10881774:-1
position: 10881774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10880932-10881065:-1:exon

position:10880932:-1
position: 10880932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10881065:-1
position: 10881065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10877153-10880593:-1:exon

position:10880593:-1
position: 10880593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Elmod2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Elmod2
product: ELMO domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034522512.1
SIO_010081: Elmod2
subclass of: SO_0000673
so part of: Elmod2
location: complement(join(10877153..10880593,10880932..10881065,10881706..10881774,10883426..10883559,10886355..10886484,10887597..10887694,10891887..10891915,10894933..10895080,10895465..10895556))
location: region:10877153-10895556:-1
so has part: feature:10895465-10895556:-1:exon
so has part: feature:10894933-10895080:-1:exon
so has part: feature:10891887-10891915:-1:exon
so has part: feature:10887597-10887694:-1:exon
so has part: feature:10886355-10886484:-1:exon
so has part: feature:10883426-10883559:-1:exon
so has part: feature:10881706-10881774:-1:exon
so has part: feature:10880932-10881065:-1:exon
so has part: feature:10877153-10880593:-1:exon

position:10895556:-1
position: 10895556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10895465-10895556:-1:exon

position:10895465:-1
position: 10895465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10894933-10895080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10891887-10891915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10887597-10887694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10886355-10886484:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10883426-10883559:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10881706-10881774:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10880932-10881065:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10877153-10880593:-1:exon

Elmod2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Elmod2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 2
translation: MFLSLWEFFYGHFFRFWMKWILRQMTGKCELQRIFDTYGGAQRTYRIENSLTYSKNKVLRNATRVAESELDRCIVNIMKEKNICPEKDTSFQICMRTCLLQITGYKQLYQDVENVRKKPYDSANAQHEKLLLKLWSLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKLHLYNFVPGVPTMEHFHQFYCYLVYEFDKFWLEEEPESIMYFNLYREKFHERIKGLLMDCNAVLTLKT
SIO_010081: Elmod2
subclass of: SO_0000673
so part of: Elmod2
location: complement(join(10880448..10880593,10880932..10881065,10881706..10881774,10883426..10883559,10886355..10886484,10887597..10887694,10891887..10891915,10894933..10895074))
location: region:10880448-10895074:-1
so has part: feature:10894933-10895074:-1:exon
so has part: feature:10891887-10891915:-1:exon
so has part: feature:10887597-10887694:-1:exon
so has part: feature:10886355-10886484:-1:exon
so has part: feature:10883426-10883559:-1:exon
so has part: feature:10881706-10881774:-1:exon
so has part: feature:10880932-10881065:-1:exon
so has part: feature:10880448-10880593:-1:exon

XP_034378402.1
type: Protein
SIO_000068: ncbiprotein

position:10880448:-1
position: 10880448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10895074:-1
position: 10895074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10894933-10895074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10891887-10891915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10887597-10887694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10886355-10886484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10883426-10883559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10881706-10881774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10880932-10881065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10880448-10880593:-1:exon

Elmod2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Elmod2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 2
translation: MFLSLWEFFYGHFFRFWMKWILRQMTGKCELQRIFDTYGGAQRTYRIENSLTYSKNKVLRNATRVAESELDRCIVNIMKEKNICPEKDTSFQICMRTCLLQITGYKQLYQDVENVRKKPYDSANAQHEKLLLKLWSLLMPTKKLKARISKQWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPKLGYSYAIVGINLTEMAYSLLKSEALKLHLYNFVPGVPTMEHFHQFYCYLVYEFDKFWLEEEPESIMYFNLYREKFHERIKGLLMDCNAVLTLKT
SIO_010081: Elmod2
subclass of: SO_0000673
so part of: Elmod2
location: complement(join(10880448..10880593,10880932..10881065,10881706..10881774,10883426..10883559,10886355..10886484,10887597..10887694,10891887..10891915,10894933..10895074))
location: region:10880448-10895074:-1
so has part: feature:10894933-10895074:-1:exon
so has part: feature:10891887-10891915:-1:exon
so has part: feature:10887597-10887694:-1:exon
so has part: feature:10886355-10886484:-1:exon
so has part: feature:10883426-10883559:-1:exon
so has part: feature:10881706-10881774:-1:exon
so has part: feature:10880932-10881065:-1:exon
so has part: feature:10880448-10880593:-1:exon

XP_034378403.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10894933-10895074:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10891887-10891915:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10887597-10887694:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10886355-10886484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10883426-10883559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10881706-10881774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10880932-10881065:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10880448-10880593:-1:exon

Mgat4d
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mgat4d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10912157..10947583
location: region:10912157-10947583:1
so has part: feature:10912157-10947583:1:exon
subclass of: SO_0000010

117723100
type: Gene
SIO_000068: ncbigene

position:10912157:1
position: 10912157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10947583:1
position: 10947583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10912157-10947583:1:exon

Mgat4d
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mgat4d
product: MGAT4 family member D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034522510.1
SIO_010081: Mgat4d
subclass of: SO_0000673
so part of: Mgat4d
location: join(10912157..10912288,10921709..10921867,10922915..10923052,10925729..10925862,10927542..10927588,10931163..10931267,10934953..10935028,10936592..10936706,10937484..10937614,10941185..10941292,10947408..10947583)
location: region:10912157-10947583:1
so has part: feature:10912157-10912288:1:exon
so has part: feature:10921709-10921867:1:exon
so has part: feature:10922915-10923052:1:exon
so has part: feature:10925729-10925862:1:exon
so has part: feature:10927542-10927588:1:exon
so has part: feature:10931163-10931267:1:exon
so has part: feature:10934953-10935028:1:exon
so has part: feature:10936592-10936706:1:exon
so has part: feature:10937484-10937614:1:exon
so has part: feature:10941185-10941292:1:exon
so has part: feature:10947408-10947583:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10912157-10912288:1:exon

position:10912288:1
position: 10912288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10921709-10921867:1:exon

position:10921709:1
position: 10921709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10921867:1
position: 10921867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10922915-10923052:1:exon

position:10922915:1
position: 10922915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10923052:1
position: 10923052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10925729-10925862:1:exon

position:10925729:1
position: 10925729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10925862:1
position: 10925862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10927542-10927588:1:exon

position:10927542:1
position: 10927542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10927588:1
position: 10927588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10931163-10931267:1:exon

position:10931163:1
position: 10931163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10931267:1
position: 10931267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10934953-10935028:1:exon

position:10934953:1
position: 10934953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10935028:1
position: 10935028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10936592-10936706:1:exon

position:10936592:1
position: 10936592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10936706:1
position: 10936706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10937484-10937614:1:exon

position:10937484:1
position: 10937484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10937614:1
position: 10937614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10941185-10941292:1:exon

position:10941185:1
position: 10941185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10941292:1
position: 10941292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10947408-10947583:1:exon

position:10947408:1
position: 10947408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mgat4d
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mgat4d
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D
translation: MKTKNINLLFAFVAILLFGFSCFCISRMNQTNNQLINCRNHVLEFKETVLRLKNKSENNRQNLAQFLHQMKQKITQTTKSSGHVLEKKVNMLGQDETLPNQFEVLKFFLPHLRTAGKIYPDIATSKERAGVSFALGISTVNRGNHTYLKQTLTSVLSRMTPGEEEDSVVILSVADTDESYLRSVVHMVKTKFRKQVQSGVLEVISIPTLFYPQTLLGKKTIKDSKSWQMKQVLDYCVLMLYAQPKATYYLQLEDDIIARKMYFTKMKDFVNSLTSKDWFYIEFSVLGLIGKLFRSKDLIDFVHFFLMFYETKPIDTLLNDIFLLRVCNRGEPFRNCLQQKKEARIQYRPSLFQHVGTHSSFQGRKQHLKDHYY
SIO_010081: Mgat4d
subclass of: SO_0000673
so part of: Mgat4d
location: join(10912195..10912288,10921709..10921867,10922915..10923052,10925729..10925862,10927542..10927588,10931163..10931267,10934953..10935028,10936592..10936706,10937484..10937614,10941185..10941292,10947408..10947422)
location: region:10912195-10947422:1
so has part: feature:10912195-10912288:1:exon
so has part: feature:10921709-10921867:1:exon
so has part: feature:10922915-10923052:1:exon
so has part: feature:10925729-10925862:1:exon
so has part: feature:10927542-10927588:1:exon
so has part: feature:10931163-10931267:1:exon
so has part: feature:10934953-10935028:1:exon
so has part: feature:10936592-10936706:1:exon
so has part: feature:10937484-10937614:1:exon
so has part: feature:10941185-10941292:1:exon
so has part: feature:10947408-10947422:1:exon

XP_034378401.1
type: Protein
SIO_000068: ncbiprotein

position:10912195:1
position: 10912195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10947422:1
position: 10947422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10912195-10912288:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10921709-10921867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10922915-10923052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10925729-10925862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10927542-10927588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10931163-10931267:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10934953-10935028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10936592-10936706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10937484-10937614:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10941185-10941292:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10947408-10947422:1:exon

LOC117723103
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10919809..10920749
location: region:10919809-10920749:1
so has part: feature:10919809-10920749:1:exon

117723103
type: Gene
SIO_000068: ncbigene

position:10919809:1
position: 10919809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10920749:1
position: 10920749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10919809-10920749:1:exon

LOC117723103
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117723103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117723103
subclass of: SO_0000673
so part of: LOC117723103
location: 10919809..10920749
location: region:10919809-10920749:1
so has part: feature:10919809-10920749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10919809-10920749:1:exon

Clgn
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Clgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10958398..10997195
location: region:10958398-10997195:1
so has part: feature:10958398-10997195:1:exon
subclass of: SO_0000010

117723414
type: Gene
SIO_000068: ncbigene

position:10958398:1
position: 10958398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10997195:1
position: 10997195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10958398-10997195:1:exon

Clgn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clgn
product: calmegin, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523031.1
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(10958398..10958526,10963163..10963310,10964679..10964828,10966196..10966272,10966817..10966875,10971121..10971262,10983080..10983161,10984384..10984576,10985255..10985444,10988786..10988899,10989016..10989166,10991028..10991243,10992032..10992157,10992473..10992635,10994006..10994109,10995131..10997195)
location: region:10958398-10997195:1
so has part: feature:10958398-10958526:1:exon
so has part: feature:10963163-10963310:1:exon
so has part: feature:10964679-10964828:1:exon
so has part: feature:10966196-10966272:1:exon
so has part: feature:10966817-10966875:1:exon
so has part: feature:10971121-10971262:1:exon
so has part: feature:10983080-10983161:1:exon
so has part: feature:10984384-10984576:1:exon
so has part: feature:10985255-10985444:1:exon
so has part: feature:10988786-10988899:1:exon
so has part: feature:10989016-10989166:1:exon
so has part: feature:10991028-10991243:1:exon
so has part: feature:10992032-10992157:1:exon
so has part: feature:10992473-10992635:1:exon
so has part: feature:10994006-10994109:1:exon
so has part: feature:10995131-10997195:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10958398-10958526:1:exon

position:10958526:1
position: 10958526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10963163-10963310:1:exon

position:10963163:1
position: 10963163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10963310:1
position: 10963310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10964679-10964828:1:exon

position:10964679:1
position: 10964679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10964828:1
position: 10964828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10966196-10966272:1:exon

position:10966196:1
position: 10966196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10966272:1
position: 10966272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10966817-10966875:1:exon

position:10966817:1
position: 10966817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10966875:1
position: 10966875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10971121-10971262:1:exon

position:10971121:1
position: 10971121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10971262:1
position: 10971262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10983080-10983161:1:exon

position:10983080:1
position: 10983080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10983161:1
position: 10983161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10984384-10984576:1:exon

position:10984384:1
position: 10984384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10984576:1
position: 10984576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10985255-10985444:1:exon

position:10985255:1
position: 10985255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10985444:1
position: 10985444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10988786-10988899:1:exon

position:10988786:1
position: 10988786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10988899:1
position: 10988899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10989016-10989166:1:exon

position:10989016:1
position: 10989016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10989166:1
position: 10989166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10991028-10991243:1:exon

position:10991028:1
position: 10991028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10991243:1
position: 10991243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10992032-10992157:1:exon

position:10992032:1
position: 10992032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10992157:1
position: 10992157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10992473-10992635:1:exon

position:10992473:1
position: 10992473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10992635:1
position: 10992635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10994006-10994109:1:exon

position:10994006:1
position: 10994006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10994109:1
position: 10994109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10995131-10997195:1:exon

position:10995131:1
position: 10995131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Clgn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clgn
product: calmegin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 9 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523030.1
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(10958399..10958645,10963163..10963310,10964679..10964828,10966196..10966272,10966817..10966875,10971121..10971262,10983080..10983161,10984384..10984576,10985255..10985444,10988786..10988899,10989016..10989166,10991028..10991243,10992032..10992157,10992473..10992635,10994006..10994109,10995131..10997195)
location: region:10958399-10997195:1
so has part: feature:10958399-10958645:1:exon
so has part: feature:10963163-10963310:1:exon
so has part: feature:10964679-10964828:1:exon
so has part: feature:10966196-10966272:1:exon
so has part: feature:10966817-10966875:1:exon
so has part: feature:10971121-10971262:1:exon
so has part: feature:10983080-10983161:1:exon
so has part: feature:10984384-10984576:1:exon
so has part: feature:10985255-10985444:1:exon
so has part: feature:10988786-10988899:1:exon
so has part: feature:10989016-10989166:1:exon
so has part: feature:10991028-10991243:1:exon
so has part: feature:10992032-10992157:1:exon
so has part: feature:10992473-10992635:1:exon
so has part: feature:10994006-10994109:1:exon
so has part: feature:10995131-10997195:1:exon

position:10958399:1
position: 10958399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10958399-10958645:1:exon

position:10958645:1
position: 10958645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10963163-10963310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10964679-10964828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10966196-10966272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10966817-10966875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10971121-10971262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10983080-10983161:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10984384-10984576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10985255-10985444:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10988786-10988899:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10989016-10989166:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10991028-10991243:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10992032-10992157:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10992473-10992635:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10994006-10994109:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10995131-10997195:1:exon

Clgn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clgn
product: calmegin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 16 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523029.1
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(10958403..10958645,10963163..10963310,10964679..10964828,10966196..10966272,10966817..10966875,10971121..10971262,10983080..10983161,10984384..10984576,10985255..10985444,10988786..10988899,10989016..10989166,10991028..10991243,10992032..10992157,10992473..10992635,10994009..10994109,10995131..10997186)
location: region:10958403-10997186:1
so has part: feature:10958403-10958645:1:exon
so has part: feature:10963163-10963310:1:exon
so has part: feature:10964679-10964828:1:exon
so has part: feature:10966196-10966272:1:exon
so has part: feature:10966817-10966875:1:exon
so has part: feature:10971121-10971262:1:exon
so has part: feature:10983080-10983161:1:exon
so has part: feature:10984384-10984576:1:exon
so has part: feature:10985255-10985444:1:exon
so has part: feature:10988786-10988899:1:exon
so has part: feature:10989016-10989166:1:exon
so has part: feature:10991028-10991243:1:exon
so has part: feature:10992032-10992157:1:exon
so has part: feature:10992473-10992635:1:exon
so has part: feature:10994009-10994109:1:exon
so has part: feature:10995131-10997186:1:exon

position:10958403:1
position: 10958403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10997186:1
position: 10997186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10958403-10958645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10963163-10963310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10964679-10964828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10966196-10966272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10966817-10966875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10971121-10971262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10983080-10983161:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10984384-10984576:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10985255-10985444:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10988786-10988899:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10989016-10989166:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10991028-10991243:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10992032-10992157:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10992473-10992635:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10994009-10994109:1:exon

position:10994009:1
position: 10994009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10995131-10997186:1:exon

Clgn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clgn
product: calmegin, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034523032.1
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(10958554..10958645,10963163..10963310,10964679..10964828,10966196..10966272,10966817..10966875,10971121..10971262,10984384..10984576,10985255..10985444,10988786..10988899,10989016..10989166,10991028..10991243,10992032..10992157,10992473..10992635,10994009..10994109,10995131..10997186)
location: region:10958554-10997186:1
so has part: feature:10958554-10958645:1:exon
so has part: feature:10963163-10963310:1:exon
so has part: feature:10964679-10964828:1:exon
so has part: feature:10966196-10966272:1:exon
so has part: feature:10966817-10966875:1:exon
so has part: feature:10971121-10971262:1:exon
so has part: feature:10984384-10984576:1:exon
so has part: feature:10985255-10985444:1:exon
so has part: feature:10988786-10988899:1:exon
so has part: feature:10989016-10989166:1:exon
so has part: feature:10991028-10991243:1:exon
so has part: feature:10992032-10992157:1:exon
so has part: feature:10992473-10992635:1:exon
so has part: feature:10994009-10994109:1:exon
so has part: feature:10995131-10997186:1:exon

position:10958554:1
position: 10958554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10958554-10958645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10963163-10963310:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10964679-10964828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10966196-10966272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10966817-10966875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10971121-10971262:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10984384-10984576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10985255-10985444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10988786-10988899:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10989016-10989166:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10991028-10991243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10992032-10992157:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10992473-10992635:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10994009-10994109:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10995131-10997186:1:exon

Clgn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmegin isoform X2
translation: MRISMHFQGVGLCLGLLFIAVNADFMDDGVEVEDFSENSDESNIKDDSSSGTIKYKTPQPIGEVYFTETFDSGNLAGWVLSKAKKDDVDAEISIYDGRWEIEELKENRVPGDRGLVLKSKAKHHAISAVLAKPFIFADKPLIVQYEVNFQEGIDCGGAYIKLLADTGDLILENFYDKTSYTIMFGPDKCGEDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRKTHLYTLVMNPDDTFEILIDQKVVNQGTLLDDVVPPINPPREIDDPSDKKPEEWDDRAKIPDPTAVKPDDWDENEPAQIEDSSAVKPDGWLDDEPKFIPNPKAKKPEDWSDDMDGEWEAPHIPNPACQIGCGEWKPPMIDNPKYKGIWKPPMINNPNYQGIWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNFIICSEEEVADQWATDSWELKIAVANANEPGLFRQLTTAAEERPWLWLMYLVMVGLPIALVTSFCWPRKVKKKYEDMGPKKTELCKLQSKATLEQEAEEEKAPEKPEDLQEEKKPSEAEVIIVEKEEVIGEPEEKNEEDGETIEGQEEVSKLSKSGSEDEMKDADESTGSGDAPLKSLRKRRVRKD
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(10963308..10963310,10964679..10964828,10966196..10966272,10966817..10966875,10971121..10971262,10983080..10983161,10984384..10984576,10985255..10985444,10988786..10988899,10989016..10989166,10991028..10991243,10992032..10992157,10992473..10992635,10994006..10994109,10995131..10995211)
location: region:10963308-10995211:1
so has part: feature:10963308-10963310:1:exon
so has part: feature:10964679-10964828:1:exon
so has part: feature:10966196-10966272:1:exon
so has part: feature:10966817-10966875:1:exon
so has part: feature:10971121-10971262:1:exon
so has part: feature:10983080-10983161:1:exon
so has part: feature:10984384-10984576:1:exon
so has part: feature:10985255-10985444:1:exon
so has part: feature:10988786-10988899:1:exon
so has part: feature:10989016-10989166:1:exon
so has part: feature:10991028-10991243:1:exon
so has part: feature:10992032-10992157:1:exon
so has part: feature:10992473-10992635:1:exon
so has part: feature:10994006-10994109:1:exon
so has part: feature:10995131-10995211:1:exon

XP_034378921.1
type: Protein
SIO_000068: ncbiprotein

position:10963308:1
position: 10963308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10995211:1
position: 10995211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10963308-10963310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10964679-10964828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10966196-10966272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10966817-10966875:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10971121-10971262:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10983080-10983161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10984384-10984576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10985255-10985444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10988786-10988899:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10989016-10989166:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10991028-10991243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10992032-10992157:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10992473-10992635:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10994006-10994109:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10995131-10995211:1:exon

Clgn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmegin isoform X2
translation: MRISMHFQGVGLCLGLLFIAVNADFMDDGVEVEDFSENSDESNIKDDSSSGTIKYKTPQPIGEVYFTETFDSGNLAGWVLSKAKKDDVDAEISIYDGRWEIEELKENRVPGDRGLVLKSKAKHHAISAVLAKPFIFADKPLIVQYEVNFQEGIDCGGAYIKLLADTGDLILENFYDKTSYTIMFGPDKCGEDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRKTHLYTLVMNPDDTFEILIDQKVVNQGTLLDDVVPPINPPREIDDPSDKKPEEWDDRAKIPDPTAVKPDDWDENEPAQIEDSSAVKPDGWLDDEPKFIPNPKAKKPEDWSDDMDGEWEAPHIPNPACQIGCGEWKPPMIDNPKYKGIWKPPMINNPNYQGIWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNFIICSEEEVADQWATDSWELKIAVANANEPGLFRQLTTAAEERPWLWLMYLVMVGLPIALVTSFCWPRKVKKKYEDMGPKKTELCKLQSKATLEQEAEEEKAPEKPEDLQEEKKPSEAEVIIVEKEEVIGEPEEKNEEDGETIEGQEEVSKLSKSGSEDEMKDADESTGSGDAPLKSLRKRRVRKD
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(10963308..10963310,10964679..10964828,10966196..10966272,10966817..10966875,10971121..10971262,10983080..10983161,10984384..10984576,10985255..10985444,10988786..10988899,10989016..10989166,10991028..10991243,10992032..10992157,10992473..10992635,10994006..10994109,10995131..10995211)
location: region:10963308-10995211:1
so has part: feature:10963308-10963310:1:exon
so has part: feature:10964679-10964828:1:exon
so has part: feature:10966196-10966272:1:exon
so has part: feature:10966817-10966875:1:exon
so has part: feature:10971121-10971262:1:exon
so has part: feature:10983080-10983161:1:exon
so has part: feature:10984384-10984576:1:exon
so has part: feature:10985255-10985444:1:exon
so has part: feature:10988786-10988899:1:exon
so has part: feature:10989016-10989166:1:exon
so has part: feature:10991028-10991243:1:exon
so has part: feature:10992032-10992157:1:exon
so has part: feature:10992473-10992635:1:exon
so has part: feature:10994006-10994109:1:exon
so has part: feature:10995131-10995211:1:exon

XP_034378922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10963308-10963310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10964679-10964828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10966196-10966272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10966817-10966875:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10971121-10971262:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10983080-10983161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10984384-10984576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10985255-10985444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10988786-10988899:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10989016-10989166:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10991028-10991243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10992032-10992157:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10992473-10992635:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10994006-10994109:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10995131-10995211:1:exon

Clgn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmegin isoform X1
translation: MRISMHFQGVGLCLGLLFIAVNADFMDDGVEVEDFSENSDESNIKDDSSSGTIKYKTPQPIGEVYFTETFDSGNLAGWVLSKAKKDDVDAEISIYDGRWEIEELKENRVPGDRGLVLKSKAKHHAISAVLAKPFIFADKPLIVQYEVNFQEGIDCGGAYIKLLADTGDLILENFYDKTSYTIMFGPDKCGEDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRKTHLYTLVMNPDDTFEILIDQKVVNQGTLLDDVVPPINPPREIDDPSDKKPEEWDDRAKIPDPTAVKPDDWDENEPAQIEDSSAVKPDGWLDDEPKFIPNPKAKKPEDWSDDMDGEWEAPHIPNPACQIGCGEWKPPMIDNPKYKGIWKPPMINNPNYQGIWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNFIICSEEEVADQWATDSWELKIAVANANEPGLFRQLTTAAEERPWLWLMYLVMVGLPIALVTSFCWPRKVKKKYEDMGPKKTELCKLQSKATLEQEAEEEKAPEKPEDLQEEKKPSEAEVIIVEKEVIGEPEEKNEEDGETIEGQEEVSKLSKSGSEDEMKDADESTGSGDAPLKSLRKRRVRKD
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(10963308..10963310,10964679..10964828,10966196..10966272,10966817..10966875,10971121..10971262,10983080..10983161,10984384..10984576,10985255..10985444,10988786..10988899,10989016..10989166,10991028..10991243,10992032..10992157,10992473..10992635,10994009..10994109,10995131..10995211)
location: region:10963308-10995211:1
so has part: feature:10963308-10963310:1:exon
so has part: feature:10964679-10964828:1:exon
so has part: feature:10966196-10966272:1:exon
so has part: feature:10966817-10966875:1:exon
so has part: feature:10971121-10971262:1:exon
so has part: feature:10983080-10983161:1:exon
so has part: feature:10984384-10984576:1:exon
so has part: feature:10985255-10985444:1:exon
so has part: feature:10988786-10988899:1:exon
so has part: feature:10989016-10989166:1:exon
so has part: feature:10991028-10991243:1:exon
so has part: feature:10992032-10992157:1:exon
so has part: feature:10992473-10992635:1:exon
so has part: feature:10994009-10994109:1:exon
so has part: feature:10995131-10995211:1:exon

XP_034378920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10963308-10963310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10964679-10964828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10966196-10966272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10966817-10966875:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10971121-10971262:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10983080-10983161:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10984384-10984576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10985255-10985444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10988786-10988899:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10989016-10989166:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10991028-10991243:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10992032-10992157:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10992473-10992635:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10994009-10994109:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10995131-10995211:1:exon

Clgn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clgn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmegin isoform X3
translation: MFGPDKCGEDYKLHFIFRHKHPKTGVFEEKHAKPPDVDLKEFFTDRKTHLYTLVMNPDDTFEILIDQKVVNQGTLLDDVVPPINPPREIDDPSDKKPEEWDDRAKIPDPTAVKPDDWDENEPAQIEDSSAVKPDGWLDDEPKFIPNPKAKKPEDWSDDMDGEWEAPHIPNPACQIGCGEWKPPMIDNPKYKGIWKPPMINNPNYQGIWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYFDNFIICSEEEVADQWATDSWELKIAVANANEPGLFRQLTTAAEERPWLWLMYLVMVGLPIALVTSFCWPRKVKKKYEDMGPKKTELCKLQSKATLEQEAEEEKAPEKPEDLQEEKKPSEAEVIIVEKEVIGEPEEKNEEDGETIEGQEEVSKLSKSGSEDEMKDADESTGSGDAPLKSLRKRRVRKD
SIO_010081: Clgn
subclass of: SO_0000673
so part of: Clgn
location: join(10984417..10984576,10985255..10985444,10988786..10988899,10989016..10989166,10991028..10991243,10992032..10992157,10992473..10992635,10994009..10994109,10995131..10995211)
location: region:10984417-10995211:1
so has part: feature:10984417-10984576:1:exon
so has part: feature:10985255-10985444:1:exon
so has part: feature:10988786-10988899:1:exon
so has part: feature:10989016-10989166:1:exon
so has part: feature:10991028-10991243:1:exon
so has part: feature:10992032-10992157:1:exon
so has part: feature:10992473-10992635:1:exon
so has part: feature:10994009-10994109:1:exon
so has part: feature:10995131-10995211:1:exon

XP_034378923.1
type: Protein
SIO_000068: ncbiprotein

position:10984417:1
position: 10984417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10984417-10984576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10985255-10985444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10988786-10988899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10989016-10989166:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10991028-10991243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10992032-10992157:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10992473-10992635:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10994009-10994109:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10995131-10995211:1:exon

Scoc
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Scoc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11003040..11028913)
location: region:11003040-11028913:-1
so has part: feature:11003040-11028913:-1:exon
subclass of: SO_0000010

117723313
type: Gene
SIO_000068: ncbigene

position:11003040:-1
position: 11003040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11028913:-1
position: 11028913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11003040-11028913:-1:exon

Scoc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Scoc
product: short coiled-coil protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034522859.1
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(11003040..11004576,11006155..11006238,11006587..11006658,11028765..11028913))
location: region:11003040-11028913:-1
so has part: feature:11028765-11028913:-1:exon
so has part: feature:11006587-11006658:-1:exon
so has part: feature:11006155-11006238:-1:exon
so has part: feature:11003040-11004576:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11028765-11028913:-1:exon

position:11028765:-1
position: 11028765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11006587-11006658:-1:exon

position:11006587:-1
position: 11006587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11006658:-1
position: 11006658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11006155-11006238:-1:exon

position:11006155:-1
position: 11006155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11006238:-1
position: 11006238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11003040-11004576:-1:exon

position:11004576:-1
position: 11004576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Scoc
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Scoc
product: short coiled-coil protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 4 long SRA reads, 11 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522860.1
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(11003042..11004576,11006155..11006238,11006587..11006658,11009498..11009742))
location: region:11003042-11009742:-1
so has part: feature:11009498-11009742:-1:exon
so has part: feature:11006587-11006658:-1:exon
so has part: feature:11006155-11006238:-1:exon
so has part: feature:11003042-11004576:-1:exon

position:11003042:-1
position: 11003042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11009742:-1
position: 11009742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11009498-11009742:-1:exon

position:11009498:-1
position: 11009498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11006587-11006658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11006155-11006238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11003042-11004576:-1:exon

Scoc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Scoc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X1
translation: MNKMDGLGTGKEEDSTFTSISLTDDTDHSLKSLRSRAKSLLPKMMNADMDAVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(11004434..11004576,11006155..11006238,11006587..11006658,11028765..11028843))
location: region:11004434-11028843:-1
so has part: feature:11028765-11028843:-1:exon
so has part: feature:11006587-11006658:-1:exon
so has part: feature:11006155-11006238:-1:exon
so has part: feature:11004434-11004576:-1:exon

XP_034378750.1
type: Protein
SIO_000068: ncbiprotein

position:11004434:-1
position: 11004434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11028843:-1
position: 11028843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11028765-11028843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11006587-11006658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11006155-11006238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11004434-11004576:-1:exon

Scoc
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Scoc
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short coiled-coil protein isoform X2
translation: MMNADMDAVDAENQVELEEKTRLINQVLELQHTLEDLSARVDAVKEENLKLKSENQVLGQYIENLMSASSVFQTTDTKSKRK
SIO_010081: Scoc
subclass of: SO_0000673
so part of: Scoc
location: complement(join(11004434..11004576,11006155..11006238,11006587..11006608))
location: region:11004434-11006608:-1
so has part: feature:11006587-11006608:-1:exon
so has part: feature:11006155-11006238:-1:exon
so has part: feature:11004434-11004576:-1:exon

XP_034378751.1
type: Protein
SIO_000068: ncbiprotein

position:11006608:-1
position: 11006608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11006587-11006608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11006155-11006238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11004434-11004576:-1:exon

LOC117723455
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117723455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11085163..11086236
location: region:11085163-11086236:1
so has part: feature:11085163-11086236:1:exon
subclass of: SO_0000010

117723455
type: Gene
SIO_000068: ncbigene

position:11085163:1
position: 11085163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11086236:1
position: 11086236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11085163-11086236:1:exon

LOC117723455
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117723455
product: olfactory receptor 10K2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins
transcript id: XM_034523068.1
SIO_010081: LOC117723455
subclass of: SO_0000673
so part of: LOC117723455
location: 11085163..11086236
location: region:11085163-11086236:1
so has part: feature:11085163-11086236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11085163-11086236:1:exon

LOC117723455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117723455
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 10K2-like
translation: MIQPSMECVNKTVVREFVFLGFSSLAELQLLLFAVFLSLYLFTLSTNAVIVATIVLDRALHTPMYFFLSVLSCSEICYTFVIVPKMLVDLLARKKSISFLGCAIQMFTFLFLGCSHSFLLAAMGYDRYVAICHPLRYTVLMGHRACVGLVAAACVCGFAVAQIITSLVFHLPFRSSNQLHHFFCDISPVLQLASHRPHSTQITIVLLCALVLVIPLLLILVSYIHIISAILQFPSTLGRYKAFSTCASHLIVVVVHYGCASFIYLRPTSSYSSSQDALISVSYTILTPLFNPVIYSLRNKEFKSALHRVIGRTVTLRQC
SIO_010081: LOC117723455
subclass of: SO_0000673
so part of: LOC117723455
location: 11085196..11086155
location: region:11085196-11086155:1
so has part: feature:11085196-11086155:1:exon

XP_034378959.1
type: Protein
SIO_000068: ncbiprotein

position:11085196:1
position: 11085196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11086155:1
position: 11086155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11085196-11086155:1:exon

Ndufb7
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ndufb7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11120818..11125176
location: region:11120818-11125176:1
so has part: feature:11120818-11125176:1:exon
subclass of: SO_0000010

117723041
type: Gene
SIO_000068: ncbigene

position:11120818:1
position: 11120818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11125176:1
position: 11125176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11120818-11125176:1:exon

Ndufb7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ndufb7
product: NADH:ubiquinone oxidoreductase subunit B7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522408.1
SIO_010081: Ndufb7
subclass of: SO_0000673
so part of: Ndufb7
location: join(11120818..11120996,11124621..11124789,11124983..11125176)
location: region:11120818-11125176:1
so has part: feature:11120818-11120996:1:exon
so has part: feature:11124621-11124789:1:exon
so has part: feature:11124983-11125176:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11120818-11120996:1:exon

position:11120996:1
position: 11120996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11124621-11124789:1:exon

position:11124621:1
position: 11124621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11124789:1
position: 11124789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11124983-11125176:1:exon

position:11124983:1
position: 11124983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ndufb7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ndufb7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
translation: MGAHLARRYLWDASVEPDPEKMPTFAPDYGFPERKERVMVATQQEMNDAQLTLQQRDYCAHYLIRLLKCKRDSFPNFLACKHEQHDWDYCEHLDYVKRMKEFERERRLLQRKKRRELKEARVASGHGDGEVGPEVAL
SIO_010081: Ndufb7
subclass of: SO_0000673
so part of: Ndufb7
location: join(11120885..11120996,11124621..11124789,11124983..11125115)
location: region:11120885-11125115:1
so has part: feature:11120885-11120996:1:exon
so has part: feature:11124621-11124789:1:exon
so has part: feature:11124983-11125115:1:exon

XP_034378299.1
type: Protein
SIO_000068: ncbiprotein

position:11120885:1
position: 11120885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11125115:1
position: 11125115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11120885-11120996:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11124621-11124789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11124983-11125115:1:exon

Tecr
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tecr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11125249..11149330)
location: region:11125249-11149330:-1
so has part: feature:11125249-11149330:-1:exon
subclass of: SO_0000010

117723040
type: Gene
SIO_000068: ncbigene

position:11125249:-1
position: 11125249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11149330:-1
position: 11149330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11125249-11149330:-1:exon

Tecr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tecr
product: trans-2,3-enoyl-CoA reductase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 2 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522407.1
SIO_010081: Tecr
subclass of: SO_0000673
so part of: Tecr
location: complement(join(11125249..11125479,11125555..11125600,11125750..11125838,11125913..11125970,11126064..11126107,11126193..11126265,11126348..11126453,11126535..11126650,11126727..11126830,11127381..11127432,11127931..11127981,11149181..11149330))
location: region:11125249-11149330:-1
so has part: feature:11149181-11149330:-1:exon
so has part: feature:11127931-11127981:-1:exon
so has part: feature:11127381-11127432:-1:exon
so has part: feature:11126727-11126830:-1:exon
so has part: feature:11126535-11126650:-1:exon
so has part: feature:11126348-11126453:-1:exon
so has part: feature:11126193-11126265:-1:exon
so has part: feature:11126064-11126107:-1:exon
so has part: feature:11125913-11125970:-1:exon
so has part: feature:11125750-11125838:-1:exon
so has part: feature:11125555-11125600:-1:exon
so has part: feature:11125249-11125479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11149181-11149330:-1:exon

position:11149181:-1
position: 11149181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11127931-11127981:-1:exon

position:11127931:-1
position: 11127931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11127981:-1
position: 11127981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11127381-11127432:-1:exon

position:11127381:-1
position: 11127381
reference: sequence
type: ReverseStrandPosition
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position:11127432:-1
position: 11127432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11126727-11126830:-1:exon

position:11126727:-1
position: 11126727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11126830:-1
position: 11126830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11126535-11126650:-1:exon

position:11126535:-1
position: 11126535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11126650:-1
position: 11126650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11126348-11126453:-1:exon

position:11126348:-1
position: 11126348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition