Arvicanthis niloticus isolate mArvNil1 chromosome 17, mArvNil1.pat.X, whole genome shotgun sequence.
type: Entry
definition: Arvicanthis niloticus isolate mArvNil1 chromosome 17, mArvNil1.pat.X, whole genome shotgun sequence.
sequence version: NC_047674.1
sequence date: 2020-05-16
sequence: sequence
division: CON
label: NC_047674.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA632612
dblink: SAMN12611849
keyword: WGS
keyword: RefSeq
source: Arvicanthis niloticus (African grass rat)
organism: Arvicanthis niloticus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022267.1.\nAssembly name: mArvNil1.pat.X\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/27. The original whole-genome shotgun project has the\naccession JAAOMG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JAN-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Freebayes v. 1.3.1;\n gEVAL manual curation v. 2020-01-16; VGP\n trio assembly pipeline v. 1.6\nAssembly Name :: mArvNil1.pat.X\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.95x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Arvicanthis niloticus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 64041812
topology: linear
so has quality: SO_0000987
location: 1..64041812
location: region:1-64041812:1
RO_0002162: 61156

NC_047674
type: RefSeq
SIO_000068: refseq

PRJNA632612
type: BioProject
SIO_000068: bioproject

SAMN12611849
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64041812:1
position: 64041812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-64041812:1:source
so part of: sequence
organism: Arvicanthis niloticus
mol type: genomic DNA
isolate: mArvNil1
specimen voucher: T564M
chromosome: 17
sex: male
tissue type: Spleen (genome), brain & testis (transcriptome)
dev stage: adult
country: USA: Santa Barbara
lat lon: 34.41938 N 119.69905 W
collection date: 06-Mar-2019
collected by: Huishi Toh

61156
type: Taxonomy
SIO_000068: taxonomy

LOC117722692
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(432181..433403)
location: region:432181-433403:-1
so has part: feature:432181-433403:-1:exon

117722692
type: Gene
SIO_000068: ncbigene

position:432181:-1
position: 432181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433403:-1
position: 433403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432181-433403:-1:exon

LOC117722692
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722692
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117722692
subclass of: SO_0000673
so part of: LOC117722692
location: complement(432181..432903)
location: region:432181-432903:-1
so has part: feature:432181-432903:-1:exon

position:432903:-1
position: 432903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432181-432903:-1:exon

LOC117722692
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722692
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117722692
subclass of: SO_0000673
so part of: LOC117722692
location: complement(433398..433403)
location: region:433398-433403:-1
so has part: feature:433398-433403:-1:exon

position:433398:-1
position: 433398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433398-433403:-1:exon

LOC117722704
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722704
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 794442..797053
location: region:794442-797053:1
so has part: feature:794442-797053:1:exon

117722704
type: Gene
SIO_000068: ncbigene

position:794442:1
position: 794442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797053:1
position: 797053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794442-797053:1:exon

LOC117722704
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722704
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722704
subclass of: SO_0000673
so part of: LOC117722704
location: 794442..795115
location: region:794442-795115:1
so has part: feature:794442-795115:1:exon

position:795115:1
position: 795115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794442-795115:1:exon

LOC117722704
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722704
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722704
subclass of: SO_0000673
so part of: LOC117722704
location: 797042..797053
location: region:797042-797053:1
so has part: feature:797042-797053:1:exon

position:797042:1
position: 797042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797042-797053:1:exon

Tmem232
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tmem232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 915604..1096836
location: region:915604-1096836:1
so has part: feature:915604-1096836:1:exon
subclass of: SO_0000010

117722553
type: Gene
SIO_000068: ncbigene

position:915604:1
position: 915604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096836:1
position: 1096836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915604-1096836:1:exon

Tmem232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tmem232
product: transmembrane protein 232, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_034521775.1
SIO_010081: Tmem232
subclass of: SO_0000673
so part of: Tmem232
location: join(915604..915722,927098..927209,927920..928025,929316..929473,933644..933743,935356..935513,942091..942245,950935..951058,955961..956213,982803..982981,998748..998983,1091180..1091273,1096600..1096836)
location: region:915604-1096836:1
so has part: feature:915604-915722:1:exon
so has part: feature:927098-927209:1:exon
so has part: feature:927920-928025:1:exon
so has part: feature:929316-929473:1:exon
so has part: feature:933644-933743:1:exon
so has part: feature:935356-935513:1:exon
so has part: feature:942091-942245:1:exon
so has part: feature:950935-951058:1:exon
so has part: feature:955961-956213:1:exon
so has part: feature:982803-982981:1:exon
so has part: feature:998748-998983:1:exon
so has part: feature:1091180-1091273:1:exon
so has part: feature:1096600-1096836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:915604-915722:1:exon

position:915722:1
position: 915722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927098-927209:1:exon

position:927098:1
position: 927098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927209:1
position: 927209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:927920-928025:1:exon

position:927920:1
position: 927920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928025:1
position: 928025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:929316-929473:1:exon

position:929316:1
position: 929316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929473:1
position: 929473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:933644-933743:1:exon

position:933644:1
position: 933644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933743:1
position: 933743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:935356-935513:1:exon

position:935356:1
position: 935356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935513:1
position: 935513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:942091-942245:1:exon

position:942091:1
position: 942091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942245:1
position: 942245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:950935-951058:1:exon

position:950935:1
position: 950935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951058:1
position: 951058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:955961-956213:1:exon

position:955961:1
position: 955961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956213:1
position: 956213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:982803-982981:1:exon

position:982803:1
position: 982803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982981:1
position: 982981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:998748-998983:1:exon

position:998748:1
position: 998748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998983:1
position: 998983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1091180-1091273:1:exon

position:1091180:1
position: 1091180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091273:1
position: 1091273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1096600-1096836:1:exon

position:1096600:1
position: 1096600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tmem232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tmem232
product: transmembrane protein 232, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034521776.1
SIO_010081: Tmem232
subclass of: SO_0000673
so part of: Tmem232
location: join(915604..915722,927098..927209,927920..928025,929319..929473,933644..933743,935356..935513,942091..942245,950935..951058,955961..956213,982803..982981,998748..998983,1091180..1091273,1096600..1096836)
location: region:915604-1096836:1
so has part: feature:915604-915722:1:exon
so has part: feature:927098-927209:1:exon
so has part: feature:927920-928025:1:exon
so has part: feature:929319-929473:1:exon
so has part: feature:933644-933743:1:exon
so has part: feature:935356-935513:1:exon
so has part: feature:942091-942245:1:exon
so has part: feature:950935-951058:1:exon
so has part: feature:955961-956213:1:exon
so has part: feature:982803-982981:1:exon
so has part: feature:998748-998983:1:exon
so has part: feature:1091180-1091273:1:exon
so has part: feature:1096600-1096836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:915604-915722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927098-927209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927920-928025:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929319-929473:1:exon

position:929319:1
position: 929319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:933644-933743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:935356-935513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942091-942245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:950935-951058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:955961-956213:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:982803-982981:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:998748-998983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1091180-1091273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1096600-1096836:1:exon

Tmem232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tmem232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 232 isoform X1
translation: MPVYKPPVVNKFGVISSTYHEELLKSNFENANRRKSQKTKPSFSITKEFILRFNYTDNPAEEEELLEQARKLIVRCKRKLGLKTLGSGKHVHLPTAWAEVIFLAQCKGEIQDEALNMLHASLDHVSFDYDQLPALFFLAESVLYRLCCDAFMKGYLYSVEIKLLKIGYLIFLRLFVFFLHGHLESFKQHLLRLQPYLYALYFSEPSYNKYPNIFSNVQFILKTSEIICKRELHSEPFVGSPDEMEDPFSELNHLQLNKRGYEVNHLLWHSVAAWSCVQNNRPQLNRVLEHLLFHKTQLQTKCWLDSALALLILGEAAKLNMACLKTLMDLMTDFLESISSVQNQEENYNIYDISWASHIIFAYTTIIAEVCLYAATSDLRKTALIGFCVCKSPQQDIFLMDKSKELPELDGASILTLLKYFSSRISNNCEKVIWIGYYGIVYNLVKMSWELQGDEEQDGLRQMIWQTLQKIKDYEEDPRIQGALVIAQAELNDPADPFSTKATPNSREEVFSKYIGWRTANTLSRLFFPSLDVAALSPKTPEIDLRRKHFVRKQQPAKKRVLHFVVKDHSSMLELSMFPYPNFFMKADKKLEEIIDHHWQKDMEARKREEAACEAQNQKDKEEMEKIRFQEIMKQRERKLNKQTKPYEIIPSEKESDPEKKCGLCELEPSTMPSTK
SIO_010081: Tmem232
subclass of: SO_0000673
so part of: Tmem232
location: join(915604..915722,927098..927209,927920..928025,929316..929473,933644..933743,935356..935513,942091..942245,950935..951058,955961..956213,982803..982981,998748..998983,1091180..1091273,1096600..1096836)
location: region:915604-1096836:1
so has part: feature:915604-915722:1:exon
so has part: feature:927098-927209:1:exon
so has part: feature:927920-928025:1:exon
so has part: feature:929316-929473:1:exon
so has part: feature:933644-933743:1:exon
so has part: feature:935356-935513:1:exon
so has part: feature:942091-942245:1:exon
so has part: feature:950935-951058:1:exon
so has part: feature:955961-956213:1:exon
so has part: feature:982803-982981:1:exon
so has part: feature:998748-998983:1:exon
so has part: feature:1091180-1091273:1:exon
so has part: feature:1096600-1096836:1:exon

XP_034377666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:915604-915722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927098-927209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927920-928025:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929316-929473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933644-933743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:935356-935513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942091-942245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:950935-951058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:955961-956213:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:982803-982981:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:998748-998983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1091180-1091273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1096600-1096836:1:exon

Tmem232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tmem232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 232 isoform X2
translation: MPVYKPPVVNKFGVISSTYHEELLKSNFENANRRKSQKTKPSFSITKEFILRFNYTDNPAEEEELLEQARKLIVRCKRKLGLKTLGSGKHVHLPTAWAEVIFLAQCKGEIQDALNMLHASLDHVSFDYDQLPALFFLAESVLYRLCCDAFMKGYLYSVEIKLLKIGYLIFLRLFVFFLHGHLESFKQHLLRLQPYLYALYFSEPSYNKYPNIFSNVQFILKTSEIICKRELHSEPFVGSPDEMEDPFSELNHLQLNKRGYEVNHLLWHSVAAWSCVQNNRPQLNRVLEHLLFHKTQLQTKCWLDSALALLILGEAAKLNMACLKTLMDLMTDFLESISSVQNQEENYNIYDISWASHIIFAYTTIIAEVCLYAATSDLRKTALIGFCVCKSPQQDIFLMDKSKELPELDGASILTLLKYFSSRISNNCEKVIWIGYYGIVYNLVKMSWELQGDEEQDGLRQMIWQTLQKIKDYEEDPRIQGALVIAQAELNDPADPFSTKATPNSREEVFSKYIGWRTANTLSRLFFPSLDVAALSPKTPEIDLRRKHFVRKQQPAKKRVLHFVVKDHSSMLELSMFPYPNFFMKADKKLEEIIDHHWQKDMEARKREEAACEAQNQKDKEEMEKIRFQEIMKQRERKLNKQTKPYEIIPSEKESDPEKKCGLCELEPSTMPSTK
SIO_010081: Tmem232
subclass of: SO_0000673
so part of: Tmem232
location: join(915604..915722,927098..927209,927920..928025,929319..929473,933644..933743,935356..935513,942091..942245,950935..951058,955961..956213,982803..982981,998748..998983,1091180..1091273,1096600..1096836)
location: region:915604-1096836:1
so has part: feature:915604-915722:1:exon
so has part: feature:927098-927209:1:exon
so has part: feature:927920-928025:1:exon
so has part: feature:929319-929473:1:exon
so has part: feature:933644-933743:1:exon
so has part: feature:935356-935513:1:exon
so has part: feature:942091-942245:1:exon
so has part: feature:950935-951058:1:exon
so has part: feature:955961-956213:1:exon
so has part: feature:982803-982981:1:exon
so has part: feature:998748-998983:1:exon
so has part: feature:1091180-1091273:1:exon
so has part: feature:1096600-1096836:1:exon

XP_034377667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:915604-915722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927098-927209:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:927920-928025:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:929319-929473:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933644-933743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:935356-935513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:942091-942245:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:950935-951058:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:955961-956213:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:982803-982981:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:998748-998983:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1091180-1091273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1096600-1096836:1:exon

LOC117722797
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722797
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 951577..951702
location: region:951577-951702:1
so has part: feature:951577-951702:1:exon
subclass of: SO_0000623

117722797
type: Gene
SIO_000068: ncbigene

position:951577:1
position: 951577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951702:1
position: 951702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951577-951702:1:exon

LOC117722797
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117722797
product: U6atac minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608570.1
SIO_010081: LOC117722797
subclass of: SO_0000673
so part of: LOC117722797
location: 951577..951702
location: region:951577-951702:1
so has part: feature:951577-951702:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:951577-951702:1:exon

LOC117722705
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722705
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1103758..1114351)
location: region:1103758-1114351:-1
so has part: feature:1103758-1114351:-1:exon

117722705
type: Gene
SIO_000068: ncbigene

position:1103758:-1
position: 1103758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114351:-1
position: 1114351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103758-1114351:-1:exon

LOC117722705
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722705
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117722705
subclass of: SO_0000673
so part of: LOC117722705
location: complement(1103758..1104620)
location: region:1103758-1104620:-1
so has part: feature:1103758-1104620:-1:exon

position:1104620:-1
position: 1104620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1103758-1104620:-1:exon

LOC117722705
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722705
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117722705
subclass of: SO_0000673
so part of: LOC117722705
location: complement(1114262..1114351)
location: region:1114262-1114351:-1
so has part: feature:1114262-1114351:-1:exon

position:1114262:-1
position: 1114262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114262-1114351:-1:exon

LOC117722706
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1182211..1182902
location: region:1182211-1182902:1
so has part: feature:1182211-1182902:1:exon

117722706
type: Gene
SIO_000068: ncbigene

position:1182211:1
position: 1182211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182902:1
position: 1182902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1182211-1182902:1:exon

LOC117722706
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722706
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC117722706
subclass of: SO_0000673
so part of: LOC117722706
location: 1182211..1182902
location: region:1182211-1182902:1
so has part: feature:1182211-1182902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1182211-1182902:1:exon

LOC117722848
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722848
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1384431..1384553
location: region:1384431-1384553:1
so has part: feature:1384431-1384553:1:exon

117722848
type: Gene
SIO_000068: ncbigene

position:1384431:1
position: 1384431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384553:1
position: 1384553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1384431-1384553:1:exon

LOC117722848
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722848
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117722848
subclass of: SO_0000673
so part of: LOC117722848
location: 1384431..1384553
location: region:1384431-1384553:1
so has part: feature:1384431-1384553:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1384431-1384553:1:exon

Man2a1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Man2a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1584734..1745646)
location: region:1584734-1745646:-1
so has part: feature:1584734-1745646:-1:exon
subclass of: SO_0000010

117722464
type: Gene
SIO_000068: ncbigene

position:1584734:-1
position: 1584734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745646:-1
position: 1745646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1584734-1745646:-1:exon

Man2a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Man2a1
product: mannosidase alpha class 2A member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521634.1
SIO_010081: Man2a1
subclass of: SO_0000673
so part of: Man2a1
location: complement(join(1584734..1587425,1588909..1589019,1599829..1600032,1604857..1604990,1606065..1606206,1609363..1609496,1625876..1625990,1628286..1628408,1629429..1629650,1630964..1631129,1661762..1661832,1663074..1663188,1667285..1667467,1670660..1670856,1675028..1675205,1677777..1677963,1685146..1685319,1694733..1694860,1709810..1709981,1721522..1721666,1722144..1722395,1745078..1745646))
location: region:1584734-1745646:-1
so has part: feature:1745078-1745646:-1:exon
so has part: feature:1722144-1722395:-1:exon
so has part: feature:1721522-1721666:-1:exon
so has part: feature:1709810-1709981:-1:exon
so has part: feature:1694733-1694860:-1:exon
so has part: feature:1685146-1685319:-1:exon
so has part: feature:1677777-1677963:-1:exon
so has part: feature:1675028-1675205:-1:exon
so has part: feature:1670660-1670856:-1:exon
so has part: feature:1667285-1667467:-1:exon
so has part: feature:1663074-1663188:-1:exon
so has part: feature:1661762-1661832:-1:exon
so has part: feature:1630964-1631129:-1:exon
so has part: feature:1629429-1629650:-1:exon
so has part: feature:1628286-1628408:-1:exon
so has part: feature:1625876-1625990:-1:exon
so has part: feature:1609363-1609496:-1:exon
so has part: feature:1606065-1606206:-1:exon
so has part: feature:1604857-1604990:-1:exon
so has part: feature:1599829-1600032:-1:exon
so has part: feature:1588909-1589019:-1:exon
so has part: feature:1584734-1587425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1745078-1745646:-1:exon

position:1745078:-1
position: 1745078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1722144-1722395:-1:exon

position:1722144:-1
position: 1722144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1722395:-1
position: 1722395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1721522-1721666:-1:exon

position:1721522:-1
position: 1721522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1721666:-1
position: 1721666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1709810-1709981:-1:exon

position:1709810:-1
position: 1709810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1709981:-1
position: 1709981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1694733-1694860:-1:exon

position:1694733:-1
position: 1694733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694860:-1
position: 1694860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1685146-1685319:-1:exon

position:1685146:-1
position: 1685146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1685319:-1
position: 1685319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1677777-1677963:-1:exon

position:1677777:-1
position: 1677777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677963:-1
position: 1677963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1675028-1675205:-1:exon

position:1675028:-1
position: 1675028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1675205:-1
position: 1675205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1670660-1670856:-1:exon

position:1670660:-1
position: 1670660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1670856:-1
position: 1670856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1667285-1667467:-1:exon

position:1667285:-1
position: 1667285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1667467:-1
position: 1667467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1663074-1663188:-1:exon

position:1663074:-1
position: 1663074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1663188:-1
position: 1663188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1661762-1661832:-1:exon

position:1661762:-1
position: 1661762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1661832:-1
position: 1661832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1630964-1631129:-1:exon

position:1630964:-1
position: 1630964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1631129:-1
position: 1631129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1629429-1629650:-1:exon

position:1629429:-1
position: 1629429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629650:-1
position: 1629650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1628286-1628408:-1:exon

position:1628286:-1
position: 1628286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1628408:-1
position: 1628408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1625876-1625990:-1:exon

position:1625876:-1
position: 1625876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625990:-1
position: 1625990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1609363-1609496:-1:exon

position:1609363:-1
position: 1609363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609496:-1
position: 1609496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1606065-1606206:-1:exon

position:1606065:-1
position: 1606065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1606206:-1
position: 1606206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1604857-1604990:-1:exon

position:1604857:-1
position: 1604857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1604990:-1
position: 1604990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1599829-1600032:-1:exon

position:1599829:-1
position: 1599829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600032:-1
position: 1600032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1588909-1589019:-1:exon

position:1588909:-1
position: 1588909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589019:-1
position: 1589019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1584734-1587425:-1:exon

position:1587425:-1
position: 1587425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Man2a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Man2a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-mannosidase 2
translation: MKLSRQFTVFGSAIFCVVIFSLYLMLDRGHLDYPRGPRQEGSFPQGQLSILQEKIDHLERLLAENNEIISNIRDSVINLSESVEDGPRGSPGNASQGSAHIHSSQLALQADPKDCLFASRSGNQHRDVQMLDVYDLIPFDNPDGGVWKQGFDIKYEADEWDHEPLQVFVVPHSHNDPGWLKTFNDYFRDKTQYIFNNMVLKLKEDSSRKFMWSEISYLAKWWDIIDNPKKEAVKSLLQNGQLEIVTGGWVMPDEASTHYFALIDQLIEGHQWLEKNLGVKPRSGWSIDPFGHSPTMAYLLKRAGFSHMLIQRVHYAVKKHFSLQKTLEFFWRQNWDLGSVTDILCHMMPFYSYDIPHTCGPDPKICCQFDFKRLPGGRYGCPWGVPPEAISPGNVQSRAQMLLDQYRKKSKLFRTKVLLAPLGDDFRFSEYTEWDLQYRNYEQLFNYMNSQPHLHVKIQFGTLSDYFDALEKAVAEKGSQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIMESRLRSAEILYHLALKQAQKYKINKFLSSPHYTTLTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLFQSLNSLEKIIGDSAFLLILKDKKLYQSDLSKAFLEMDMKQSSQDSLPQKNIIQLSTQEPRYLVVYNPFEQERLSVVSIRVNSATVKVLSDSGKPVEVQVSAVWNNVRTISQAAYEAAFLAHVPPLGLKVYKILESESSSSHLADYVLYNNDGLAENGIFHMKNVVDSGDAITIENSFLTLWFDRSGLLEKVRRKEDSKQHELKVQFLWYGTTNKRDKSGAYLFLPDGQGQPYGSLRPPIVRVTRGKIYSDVTCFLEHVTHKVRLYNIQGIEGQSMEVSNIVDIRNVHNREIVMRITSKINNQNRYYTDLNGYQIQPRRTMSKLPLQANVYPMSTMVYIQDAGHRLTLLSAQSLGASSMASGQIEVFMDRRLMQDDNRGLGQGVHDNKITANLFRLLLENRSGVNTEEDKKSPVSYPSLLSHMTSSFLNHPFLPMVLSGHLPSSAFELLSEFPLLQSSLPCDIHLVNLRTIQSKMGKGYSDEAALILHRKVFDCQFSSRGIGLPCSTTQGKMSVLKLFNKFAVESLIPSSLSLMHSPPDAQNMSEVGLSPMEISTFRIRLRGS
SIO_010081: Man2a1
subclass of: SO_0000673
so part of: Man2a1
location: complement(join(1587267..1587425,1588909..1589019,1599829..1600032,1604857..1604990,1606065..1606206,1609363..1609496,1625876..1625990,1628286..1628408,1629429..1629650,1630964..1631129,1661762..1661832,1663074..1663188,1667285..1667467,1670660..1670856,1675028..1675205,1677777..1677963,1685146..1685319,1694733..1694860,1709810..1709981,1721522..1721666,1722144..1722395,1745078..1745212))
location: region:1587267-1745212:-1
so has part: feature:1745078-1745212:-1:exon
so has part: feature:1722144-1722395:-1:exon
so has part: feature:1721522-1721666:-1:exon
so has part: feature:1709810-1709981:-1:exon
so has part: feature:1694733-1694860:-1:exon
so has part: feature:1685146-1685319:-1:exon
so has part: feature:1677777-1677963:-1:exon
so has part: feature:1675028-1675205:-1:exon
so has part: feature:1670660-1670856:-1:exon
so has part: feature:1667285-1667467:-1:exon
so has part: feature:1663074-1663188:-1:exon
so has part: feature:1661762-1661832:-1:exon
so has part: feature:1630964-1631129:-1:exon
so has part: feature:1629429-1629650:-1:exon
so has part: feature:1628286-1628408:-1:exon
so has part: feature:1625876-1625990:-1:exon
so has part: feature:1609363-1609496:-1:exon
so has part: feature:1606065-1606206:-1:exon
so has part: feature:1604857-1604990:-1:exon
so has part: feature:1599829-1600032:-1:exon
so has part: feature:1588909-1589019:-1:exon
so has part: feature:1587267-1587425:-1:exon

XP_034377525.1
type: Protein
SIO_000068: ncbiprotein

position:1587267:-1
position: 1587267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745212:-1
position: 1745212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1745078-1745212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1722144-1722395:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1721522-1721666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1709810-1709981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694733-1694860:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1685146-1685319:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1677777-1677963:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1675028-1675205:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1670660-1670856:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1667285-1667467:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1663074-1663188:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1661762-1661832:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1630964-1631129:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1629429-1629650:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1628286-1628408:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1625876-1625990:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1609363-1609496:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1606065-1606206:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1604857-1604990:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1599829-1600032:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1588909-1589019:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1587267-1587425:-1:exon

Pja2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Pja2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1997175..2048350
location: region:1997175-2048350:1
so has part: feature:1997175-2048350:1:exon
subclass of: SO_0000010

117722224
type: Gene
SIO_000068: ncbigene

position:1997175:1
position: 1997175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048350:1
position: 2048350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1997175-2048350:1:exon

Pja2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pja2
product: praja ring finger ubiquitin ligase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 16 long SRA reads, 9 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521184.1
SIO_010081: Pja2
subclass of: SO_0000673
so part of: Pja2
location: join(1997175..1997360,2019348..2019466,2020336..2020536,2022043..2023084,2037943..2038128,2040820..2040931,2042517..2042631,2042970..2043091,2045820..2048350)
location: region:1997175-2048350:1
so has part: feature:1997175-1997360:1:exon
so has part: feature:2019348-2019466:1:exon
so has part: feature:2020336-2020536:1:exon
so has part: feature:2022043-2023084:1:exon
so has part: feature:2037943-2038128:1:exon
so has part: feature:2040820-2040931:1:exon
so has part: feature:2042517-2042631:1:exon
so has part: feature:2042970-2043091:1:exon
so has part: feature:2045820-2048350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1997175-1997360:1:exon

position:1997360:1
position: 1997360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2019348-2019466:1:exon

position:2019348:1
position: 2019348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2019466:1
position: 2019466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2020336-2020536:1:exon

position:2020336:1
position: 2020336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020536:1
position: 2020536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2022043-2023084:1:exon

position:2022043:1
position: 2022043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023084:1
position: 2023084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2037943-2038128:1:exon

position:2037943:1
position: 2037943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2038128:1
position: 2038128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2040820-2040931:1:exon

position:2040820:1
position: 2040820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040931:1
position: 2040931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2042517-2042631:1:exon

position:2042517:1
position: 2042517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042631:1
position: 2042631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2042970-2043091:1:exon

position:2042970:1
position: 2042970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2043091:1
position: 2043091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2045820-2048350:1:exon

position:2045820:1
position: 2045820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pja2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pja2
product: praja ring finger ubiquitin ligase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 24 long SRA reads, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521183.1
SIO_010081: Pja2
subclass of: SO_0000673
so part of: Pja2
location: join(1997184..1997360,2019348..2019466,2020336..2020536,2022043..2023084,2033786..2033971,2037943..2038128,2040820..2040931,2042517..2042631,2042970..2043091,2045820..2048350)
location: region:1997184-2048350:1
so has part: feature:1997184-1997360:1:exon
so has part: feature:2019348-2019466:1:exon
so has part: feature:2020336-2020536:1:exon
so has part: feature:2022043-2023084:1:exon
so has part: feature:2033786-2033971:1:exon
so has part: feature:2037943-2038128:1:exon
so has part: feature:2040820-2040931:1:exon
so has part: feature:2042517-2042631:1:exon
so has part: feature:2042970-2043091:1:exon
so has part: feature:2045820-2048350:1:exon

position:1997184:1
position: 1997184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1997184-1997360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2019348-2019466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2020336-2020536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2022043-2023084:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2033786-2033971:1:exon

position:2033786:1
position: 2033786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033971:1
position: 2033971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2037943-2038128:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2040820-2040931:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2042517-2042631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2042970-2043091:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2045820-2048350:1:exon

Pja2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pja2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Praja-2 isoform X1
translation: MSQYTEKEPSVMDQESNKAAWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAGDDYEVLELDDVPKENTSGSNSLDQVHSLPSEPTVEKSETEIPTCGPALNQTTESSPSVATICHSEEVRETLESNTNLHNHAETEYTPAVCNVSSVQNGIVLVQTDSYDPVSKHDENDSLQLCTEAVEGGRHQKVLGNSVFELENGEAEIYADLSPSVPSLNGEISEEFEELDSAPLEKNCTGDAELVHQNGQEFQRSSEDGIVRKRRQDDTDQGRQTENSAEDADCVPGRVEQNASDRASHHGSSPEQVVRPKVRKVISSSQVDQEIGFNRHEAKQRSVQRWREALEVEECSSDDPIIKCDDYDGDHDCMYLTPSYSRVTQRETERDRVASEHGATASGRRAARENAFWNACGEYYQLFDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEEENQELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPEAFMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIDASAAASSDPDPDVSPANDNAEEAP
SIO_010081: Pja2
subclass of: SO_0000673
so part of: Pja2
location: join(2019436..2019466,2020336..2020536,2022043..2023084,2033786..2033971,2037943..2038128,2040820..2040931,2042517..2042631,2042970..2043091,2045820..2045945)
location: region:2019436-2045945:1
so has part: feature:2019436-2019466:1:exon
so has part: feature:2020336-2020536:1:exon
so has part: feature:2022043-2023084:1:exon
so has part: feature:2033786-2033971:1:exon
so has part: feature:2037943-2038128:1:exon
so has part: feature:2040820-2040931:1:exon
so has part: feature:2042517-2042631:1:exon
so has part: feature:2042970-2043091:1:exon
so has part: feature:2045820-2045945:1:exon

XP_034377074.1
type: Protein
SIO_000068: ncbiprotein

position:2019436:1
position: 2019436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045945:1
position: 2045945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2019436-2019466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2020336-2020536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2022043-2023084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2033786-2033971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2037943-2038128:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2040820-2040931:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2042517-2042631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2042970-2043091:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2045820-2045945:1:exon

Pja2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pja2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Praja-2 isoform X2
translation: MSQYTEKEPSVMDQESNKAAWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAGDDYEVLELDDVPKENTSGSNSLDQVHSLPSEPTVEKSETEIPTCGPALNQTTESSPSVATICHSEEVRETLESNTNLHNHAETEYTPAVCNVSSVQNGIVLVQTDSYDPVSKHDENDSLQLCTEAVEGGRHQKVLGNSVFELENGEAEIYADLSPSVPSLNGEISEEFEELDSAPLEKNCTGDAELVHQNGQEFQRSSEDGIVRKRRQDDTDQGRQTENSAEDADCVPGRVEQNASDRASHHGSSPEQVVRPKVRKVISSSQVDQEIGFNRHEAKQRSVQRWREALEVEECSSDDPIIKCDDYDGDHDCMYLTPSYSRVTQRETERDRVASEHGATASGRRAARENAFWNACGEYYQLFDKDEDREQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPEAFMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIDASAAASSDPDPDVSPANDNAEEAP
SIO_010081: Pja2
subclass of: SO_0000673
so part of: Pja2
location: join(2019436..2019466,2020336..2020536,2022043..2023084,2037943..2038128,2040820..2040931,2042517..2042631,2042970..2043091,2045820..2045945)
location: region:2019436-2045945:1
so has part: feature:2019436-2019466:1:exon
so has part: feature:2020336-2020536:1:exon
so has part: feature:2022043-2023084:1:exon
so has part: feature:2037943-2038128:1:exon
so has part: feature:2040820-2040931:1:exon
so has part: feature:2042517-2042631:1:exon
so has part: feature:2042970-2043091:1:exon
so has part: feature:2045820-2045945:1:exon

XP_034377075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2019436-2019466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2020336-2020536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2022043-2023084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2037943-2038128:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2040820-2040931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2042517-2042631:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2042970-2043091:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2045820-2045945:1:exon

LOC117722784
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722784
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2202932..2203259)
location: region:2202932-2203259:-1
so has part: feature:2202932-2203259:-1:exon

117722784
type: Gene
SIO_000068: ncbigene

position:2202932:-1
position: 2202932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2203259:-1
position: 2203259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2202932-2203259:-1:exon

LOC117722784
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722784
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722784
subclass of: SO_0000673
so part of: LOC117722784
location: complement(2202932..2203259)
location: region:2202932-2203259:-1
so has part: feature:2202932-2203259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2202932-2203259:-1:exon

Fer
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Fer
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2214028..2494367)
location: region:2214028-2494367:-1
so has part: feature:2214028-2494367:-1:exon
subclass of: SO_0000010

117722320
type: Gene
SIO_000068: ncbigene

position:2214028:-1
position: 2214028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494367:-1
position: 2494367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2214028-2494367:-1:exon

Fer
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fer
product: FER tyrosine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034521355.1
SIO_010081: Fer
subclass of: SO_0000673
so part of: Fer
location: complement(join(2214028..2214640,2215787..2215909,2220054..2220208,2279426..2279549,2306922..2307016,2309028..2309143,2313088..2313144,2362047..2362169,2368741..2368947,2376960..2377052,2405248..2405437,2412241..2412363,2440248..2440367,2440909..2441046,2443823..2444006,2454983..2455082,2458071..2458244,2469537..2469810,2494299..2494367))
location: region:2214028-2494367:-1
so has part: feature:2494299-2494367:-1:exon
so has part: feature:2469537-2469810:-1:exon
so has part: feature:2458071-2458244:-1:exon
so has part: feature:2454983-2455082:-1:exon
so has part: feature:2443823-2444006:-1:exon
so has part: feature:2440909-2441046:-1:exon
so has part: feature:2440248-2440367:-1:exon
so has part: feature:2412241-2412363:-1:exon
so has part: feature:2405248-2405437:-1:exon
so has part: feature:2376960-2377052:-1:exon
so has part: feature:2368741-2368947:-1:exon
so has part: feature:2362047-2362169:-1:exon
so has part: feature:2313088-2313144:-1:exon
so has part: feature:2309028-2309143:-1:exon
so has part: feature:2306922-2307016:-1:exon
so has part: feature:2279426-2279549:-1:exon
so has part: feature:2220054-2220208:-1:exon
so has part: feature:2215787-2215909:-1:exon
so has part: feature:2214028-2214640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2494299-2494367:-1:exon

position:2494299:-1
position: 2494299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2469537-2469810:-1:exon

position:2469537:-1
position: 2469537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2469810:-1
position: 2469810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2458071-2458244:-1:exon

position:2458071:-1
position: 2458071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2458244:-1
position: 2458244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2454983-2455082:-1:exon

position:2454983:-1
position: 2454983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2455082:-1
position: 2455082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2443823-2444006:-1:exon

position:2443823:-1
position: 2443823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2444006:-1
position: 2444006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2440909-2441046:-1:exon

position:2440909:-1
position: 2440909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2441046:-1
position: 2441046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2440248-2440367:-1:exon

position:2440248:-1
position: 2440248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2440367:-1
position: 2440367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2412241-2412363:-1:exon

position:2412241:-1
position: 2412241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2412363:-1
position: 2412363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2405248-2405437:-1:exon

position:2405248:-1
position: 2405248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2405437:-1
position: 2405437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2376960-2377052:-1:exon

position:2376960:-1
position: 2376960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2377052:-1
position: 2377052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2368741-2368947:-1:exon

position:2368741:-1
position: 2368741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2368947:-1
position: 2368947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2362047-2362169:-1:exon

position:2362047:-1
position: 2362047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2362169:-1
position: 2362169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2313088-2313144:-1:exon

position:2313088:-1
position: 2313088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2313144:-1
position: 2313144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2309028-2309143:-1:exon

position:2309028:-1
position: 2309028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2309143:-1
position: 2309143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2306922-2307016:-1:exon

position:2306922:-1
position: 2306922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2307016:-1
position: 2307016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2279426-2279549:-1:exon

position:2279426:-1
position: 2279426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2279549:-1
position: 2279549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2220054-2220208:-1:exon

position:2220054:-1
position: 2220054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2220208:-1
position: 2220208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2215787-2215909:-1:exon

position:2215787:-1
position: 2215787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2215909:-1
position: 2215909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2214028-2214640:-1:exon

position:2214640:-1
position: 2214640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fer
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fer
product: FER tyrosine kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521356.1
SIO_010081: Fer
subclass of: SO_0000673
so part of: Fer
location: complement(join(2214028..2214640,2215787..2215909,2220054..2220208,2279426..2279549,2306922..2307016,2309028..2309143,2313088..2313144,2362047..2362169,2368741..2368944,2376960..2377052,2405248..2405437,2412241..2412363,2440248..2440367,2440909..2441046,2443823..2444006,2454983..2455082,2458071..2458244,2469537..2469810,2479383..2479527,2494299..2494339))
location: region:2214028-2494339:-1
so has part: feature:2494299-2494339:-1:exon
so has part: feature:2479383-2479527:-1:exon
so has part: feature:2469537-2469810:-1:exon
so has part: feature:2458071-2458244:-1:exon
so has part: feature:2454983-2455082:-1:exon
so has part: feature:2443823-2444006:-1:exon
so has part: feature:2440909-2441046:-1:exon
so has part: feature:2440248-2440367:-1:exon
so has part: feature:2412241-2412363:-1:exon
so has part: feature:2405248-2405437:-1:exon
so has part: feature:2376960-2377052:-1:exon
so has part: feature:2368741-2368944:-1:exon
so has part: feature:2362047-2362169:-1:exon
so has part: feature:2313088-2313144:-1:exon
so has part: feature:2309028-2309143:-1:exon
so has part: feature:2306922-2307016:-1:exon
so has part: feature:2279426-2279549:-1:exon
so has part: feature:2220054-2220208:-1:exon
so has part: feature:2215787-2215909:-1:exon
so has part: feature:2214028-2214640:-1:exon

position:2494339:-1
position: 2494339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2494299-2494339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2479383-2479527:-1:exon

position:2479383:-1
position: 2479383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2479527:-1
position: 2479527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2469537-2469810:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2458071-2458244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2454983-2455082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2443823-2444006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2440909-2441046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2440248-2440367:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2412241-2412363:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2405248-2405437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2376960-2377052:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2368741-2368944:-1:exon

position:2368944:-1
position: 2368944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2362047-2362169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2313088-2313144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2309028-2309143:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2306922-2307016:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2279426-2279549:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2220054-2220208:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2215787-2215909:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2214028-2214640:-1:exon

Fer
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fer
product: FER tyrosine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034521354.1
SIO_010081: Fer
subclass of: SO_0000673
so part of: Fer
location: complement(join(2214323..2214640,2215787..2215909,2220054..2220208,2279426..2279549,2306922..2307016,2309028..2309143,2313088..2313144,2362047..2362169,2368741..2368947,2376960..2377052,2405248..2405437,2412241..2412363,2440248..2440367,2440909..2441046,2443823..2444006,2454983..2455082,2458071..2458244,2469537..2469810,2479383..2479527,2494299..2494355))
location: region:2214323-2494355:-1
so has part: feature:2494299-2494355:-1:exon
so has part: feature:2479383-2479527:-1:exon
so has part: feature:2469537-2469810:-1:exon
so has part: feature:2458071-2458244:-1:exon
so has part: feature:2454983-2455082:-1:exon
so has part: feature:2443823-2444006:-1:exon
so has part: feature:2440909-2441046:-1:exon
so has part: feature:2440248-2440367:-1:exon
so has part: feature:2412241-2412363:-1:exon
so has part: feature:2405248-2405437:-1:exon
so has part: feature:2376960-2377052:-1:exon
so has part: feature:2368741-2368947:-1:exon
so has part: feature:2362047-2362169:-1:exon
so has part: feature:2313088-2313144:-1:exon
so has part: feature:2309028-2309143:-1:exon
so has part: feature:2306922-2307016:-1:exon
so has part: feature:2279426-2279549:-1:exon
so has part: feature:2220054-2220208:-1:exon
so has part: feature:2215787-2215909:-1:exon
so has part: feature:2214323-2214640:-1:exon

position:2214323:-1
position: 2214323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494355:-1
position: 2494355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2494299-2494355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2479383-2479527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2469537-2469810:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2458071-2458244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2454983-2455082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2443823-2444006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2440909-2441046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2440248-2440367:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2412241-2412363:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2405248-2405437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2376960-2377052:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2368741-2368947:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2362047-2362169:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2313088-2313144:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2309028-2309143:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2306922-2307016:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2279426-2279549:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2220054-2220208:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2215787-2215909:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2214323-2214640:-1:exon

Fer
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fer
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fer isoform X2
translation: MGFGSDLKNSQEAVLKLQDWELRLLETVKKFMALRIKSDKEYAYTLQNLCNQVDKESAVQVNYVSNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPLHRLTMMIKDKQQVKKSYVGIHQQIEAEMIKVTKTELEKLKSSYRQLIKEMNSAKEKYKEALAKGKETEKAKERYDKATMKLHILHNQYVLALKGAQLHQSQYYDTTLPLLLDSVQKMQEEMIKALKGIFDEYSQITSLVTEEIVNVHKEIQMSVEQIDPSTEYNNFIDVHRTTAAKEQEIEFDTSLLEENENLQANEIMWNNLTADSLQVMLKTLAEELTQTQQMLLHKEAAVLELEKRIDESSETCEKKSDIVLLLGQKQALEELKQSVQQLRCTEAKCAAQKELLEQKVQENDGKEPPPVVNYEEDARSVTSMERKERLSKFESIRHSIAGIIKSPKSVLGSSSLSDVISVGEKPLAEHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQFVDNLYRFEGTGFSNIPQLIDHHFITKQVITKKSGVVLLNPIPKDKKWILNHEDVSLGELLGKGNFGEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLSFLRKRKDELKLKQLVKFSLDVAAGMLYLESKNCIHRDLAARNCLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQAREQVERGYRMSAPQNCPEEIFTIMLKCWDYKPENRPKFNDLHKELTAIKKKIT
SIO_010081: Fer
subclass of: SO_0000673
so part of: Fer
location: complement(join(2214498..2214640,2215787..2215909,2220054..2220208,2279426..2279549,2306922..2307016,2309028..2309143,2313088..2313144,2362047..2362169,2368741..2368944,2376960..2377052,2405248..2405437,2412241..2412363,2440248..2440367,2440909..2441046,2443823..2444006,2454983..2455082,2458071..2458244,2469537..2469743))
location: region:2214498-2469743:-1
so has part: feature:2469537-2469743:-1:exon
so has part: feature:2458071-2458244:-1:exon
so has part: feature:2454983-2455082:-1:exon
so has part: feature:2443823-2444006:-1:exon
so has part: feature:2440909-2441046:-1:exon
so has part: feature:2440248-2440367:-1:exon
so has part: feature:2412241-2412363:-1:exon
so has part: feature:2405248-2405437:-1:exon
so has part: feature:2376960-2377052:-1:exon
so has part: feature:2368741-2368944:-1:exon
so has part: feature:2362047-2362169:-1:exon
so has part: feature:2313088-2313144:-1:exon
so has part: feature:2309028-2309143:-1:exon
so has part: feature:2306922-2307016:-1:exon
so has part: feature:2279426-2279549:-1:exon
so has part: feature:2220054-2220208:-1:exon
so has part: feature:2215787-2215909:-1:exon
so has part: feature:2214498-2214640:-1:exon

XP_034377247.1
type: Protein
SIO_000068: ncbiprotein

position:2214498:-1
position: 2214498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2469743:-1
position: 2469743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2469537-2469743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2458071-2458244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2454983-2455082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2443823-2444006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2440909-2441046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2440248-2440367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2412241-2412363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2405248-2405437:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2376960-2377052:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2368741-2368944:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2362047-2362169:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2313088-2313144:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2309028-2309143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2306922-2307016:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2279426-2279549:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2220054-2220208:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2215787-2215909:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2214498-2214640:-1:exon

Fer
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fer
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fer isoform X1
translation: MGFGSDLKNSQEAVLKLQDWELRLLETVKKFMALRIKSDKEYAYTLQNLCNQVDKESAVQVNYVSNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPLHRLTMMIKDKQQVKKSYVGIHQQIEAEMIKVTKTELEKLKSSYRQLIKEMNSAKEKYKEALAKGKETEKAKERYDKATMKLHILHNQYVLALKGAQLHQSQYYDTTLPLLLDSVQKMQEEMIKALKGIFDEYSQITSLVTEEIVNVHKEIQMSVEQIDPSTEYNNFIDVHRTTAAKEQEIEFDTSLLEENENLQANEIMWNNLTADSLQVMLKTLAEELTQTQQMLLHKEAAVLELEKRIDESSETCEKKSDIVLLLGQKQALEELKQSVQQLRCTEAKCAAQKELLEQKVQENDGKEPPPVVNYEEDARSVTSMERKERLSKFESIRHSIAGIIKSPKSVLGSSSQLSDVISVGEKPLAEHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQFVDNLYRFEGTGFSNIPQLIDHHFITKQVITKKSGVVLLNPIPKDKKWILNHEDVSLGELLGKGNFGEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLSFLRKRKDELKLKQLVKFSLDVAAGMLYLESKNCIHRDLAARNCLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQAREQVERGYRMSAPQNCPEEIFTIMLKCWDYKPENRPKFNDLHKELTAIKKKIT
SIO_010081: Fer
subclass of: SO_0000673
so part of: Fer
location: complement(join(2214498..2214640,2215787..2215909,2220054..2220208,2279426..2279549,2306922..2307016,2309028..2309143,2313088..2313144,2362047..2362169,2368741..2368947,2376960..2377052,2405248..2405437,2412241..2412363,2440248..2440367,2440909..2441046,2443823..2444006,2454983..2455082,2458071..2458244,2469537..2469743))
location: region:2214498-2469743:-1
so has part: feature:2469537-2469743:-1:exon
so has part: feature:2458071-2458244:-1:exon
so has part: feature:2454983-2455082:-1:exon
so has part: feature:2443823-2444006:-1:exon
so has part: feature:2440909-2441046:-1:exon
so has part: feature:2440248-2440367:-1:exon
so has part: feature:2412241-2412363:-1:exon
so has part: feature:2405248-2405437:-1:exon
so has part: feature:2376960-2377052:-1:exon
so has part: feature:2368741-2368947:-1:exon
so has part: feature:2362047-2362169:-1:exon
so has part: feature:2313088-2313144:-1:exon
so has part: feature:2309028-2309143:-1:exon
so has part: feature:2306922-2307016:-1:exon
so has part: feature:2279426-2279549:-1:exon
so has part: feature:2220054-2220208:-1:exon
so has part: feature:2215787-2215909:-1:exon
so has part: feature:2214498-2214640:-1:exon

XP_034377245.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2469537-2469743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2458071-2458244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2454983-2455082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2443823-2444006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2440909-2441046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2440248-2440367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2412241-2412363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2405248-2405437:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2376960-2377052:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2368741-2368947:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2362047-2362169:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2313088-2313144:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2309028-2309143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2306922-2307016:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2279426-2279549:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2220054-2220208:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2215787-2215909:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2214498-2214640:-1:exon

Fer
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fer
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fer isoform X1
translation: MGFGSDLKNSQEAVLKLQDWELRLLETVKKFMALRIKSDKEYAYTLQNLCNQVDKESAVQVNYVSNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPLHRLTMMIKDKQQVKKSYVGIHQQIEAEMIKVTKTELEKLKSSYRQLIKEMNSAKEKYKEALAKGKETEKAKERYDKATMKLHILHNQYVLALKGAQLHQSQYYDTTLPLLLDSVQKMQEEMIKALKGIFDEYSQITSLVTEEIVNVHKEIQMSVEQIDPSTEYNNFIDVHRTTAAKEQEIEFDTSLLEENENLQANEIMWNNLTADSLQVMLKTLAEELTQTQQMLLHKEAAVLELEKRIDESSETCEKKSDIVLLLGQKQALEELKQSVQQLRCTEAKCAAQKELLEQKVQENDGKEPPPVVNYEEDARSVTSMERKERLSKFESIRHSIAGIIKSPKSVLGSSSQLSDVISVGEKPLAEHDWYHGAIPRIEAQELLKQQGDFLVRESHGKPGEYVLSVYSDGQRRHFIIQFVDNLYRFEGTGFSNIPQLIDHHFITKQVITKKSGVVLLNPIPKDKKWILNHEDVSLGELLGKGNFGEVYKGTLKDKTPVAVKTCKEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLSFLRKRKDELKLKQLVKFSLDVAAGMLYLESKNCIHRDLAARNCLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQAREQVERGYRMSAPQNCPEEIFTIMLKCWDYKPENRPKFNDLHKELTAIKKKIT
SIO_010081: Fer
subclass of: SO_0000673
so part of: Fer
location: complement(join(2214498..2214640,2215787..2215909,2220054..2220208,2279426..2279549,2306922..2307016,2309028..2309143,2313088..2313144,2362047..2362169,2368741..2368947,2376960..2377052,2405248..2405437,2412241..2412363,2440248..2440367,2440909..2441046,2443823..2444006,2454983..2455082,2458071..2458244,2469537..2469743))
location: region:2214498-2469743:-1
so has part: feature:2469537-2469743:-1:exon
so has part: feature:2458071-2458244:-1:exon
so has part: feature:2454983-2455082:-1:exon
so has part: feature:2443823-2444006:-1:exon
so has part: feature:2440909-2441046:-1:exon
so has part: feature:2440248-2440367:-1:exon
so has part: feature:2412241-2412363:-1:exon
so has part: feature:2405248-2405437:-1:exon
so has part: feature:2376960-2377052:-1:exon
so has part: feature:2368741-2368947:-1:exon
so has part: feature:2362047-2362169:-1:exon
so has part: feature:2313088-2313144:-1:exon
so has part: feature:2309028-2309143:-1:exon
so has part: feature:2306922-2307016:-1:exon
so has part: feature:2279426-2279549:-1:exon
so has part: feature:2220054-2220208:-1:exon
so has part: feature:2215787-2215909:-1:exon
so has part: feature:2214498-2214640:-1:exon

XP_034377246.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2469537-2469743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2458071-2458244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2454983-2455082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2443823-2444006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2440909-2441046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2440248-2440367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2412241-2412363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2405248-2405437:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2376960-2377052:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2368741-2368947:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2362047-2362169:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2313088-2313144:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2309028-2309143:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2306922-2307016:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2279426-2279549:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2220054-2220208:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2215787-2215909:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2214498-2214640:-1:exon

Fer
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fer
product: FER tyrosine kinase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034521357.1
SIO_010081: Fer
subclass of: SO_0000673
so part of: Fer
location: complement(join(2389470..2389544,2405248..2405437,2412241..2412363,2440248..2440367,2440909..2441046,2443823..2444006,2454983..2455082,2458071..2458244,2469537..2469810,2479383..2479527,2494299..2494339))
location: region:2389470-2494339:-1
so has part: feature:2494299-2494339:-1:exon
so has part: feature:2479383-2479527:-1:exon
so has part: feature:2469537-2469810:-1:exon
so has part: feature:2458071-2458244:-1:exon
so has part: feature:2454983-2455082:-1:exon
so has part: feature:2443823-2444006:-1:exon
so has part: feature:2440909-2441046:-1:exon
so has part: feature:2440248-2440367:-1:exon
so has part: feature:2412241-2412363:-1:exon
so has part: feature:2405248-2405437:-1:exon
so has part: feature:2389470-2389544:-1:exon

position:2389470:-1
position: 2389470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2494299-2494339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2479383-2479527:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2469537-2469810:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2458071-2458244:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2454983-2455082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2443823-2444006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2440909-2441046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2440248-2440367:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2412241-2412363:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2405248-2405437:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2389470-2389544:-1:exon

position:2389544:-1
position: 2389544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fer
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fer
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fer isoform X3
translation: MGFGSDLKNSQEAVLKLQDWELRLLETVKKFMALRIKSDKEYAYTLQNLCNQVDKESAVQVNYVSNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPLHRLTMMIKDKQQVKKSYVGIHQQIEAEMIKVTKTELEKLKSSYRQLIKEMNSAKEKYKEALAKGKETEKAKERYDKATMKLHILHNQYVLALKGAQLHQSQYYDTTLPLLLDSVQKMQEEMIKALKGIFDEYSQITSLVTEEIVNVHKEIQMSVEQIDPSTEYNNFIDVHRTTAAKEQEIEFDTSLLEENENLQANEIMWNNLTADSLQVMLKTLAEELTQTQQMLLHKEAAVLELEKRIDESSETCEKKSDIVLLLGQKQALEELKQSVQQLRCTEAKCAAQKELLEQKVQENDGKEPPPVVNYEEDARSVTSMTGRSVDTLTSACILLALVKI
SIO_010081: Fer
subclass of: SO_0000673
so part of: Fer
location: complement(join(2389482..2389544,2405248..2405437,2412241..2412363,2440248..2440367,2440909..2441046,2443823..2444006,2454983..2455082,2458071..2458244,2469537..2469743))
location: region:2389482-2469743:-1
so has part: feature:2469537-2469743:-1:exon
so has part: feature:2458071-2458244:-1:exon
so has part: feature:2454983-2455082:-1:exon
so has part: feature:2443823-2444006:-1:exon
so has part: feature:2440909-2441046:-1:exon
so has part: feature:2440248-2440367:-1:exon
so has part: feature:2412241-2412363:-1:exon
so has part: feature:2405248-2405437:-1:exon
so has part: feature:2389482-2389544:-1:exon

XP_034377248.1
type: Protein
SIO_000068: ncbiprotein

position:2389482:-1
position: 2389482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2469537-2469743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2458071-2458244:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2454983-2455082:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2443823-2444006:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2440909-2441046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2440248-2440367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2412241-2412363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2405248-2405437:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2389482-2389544:-1:exon

LOC117722492
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2505211..2505955
location: region:2505211-2505955:1
so has part: feature:2505211-2505955:1:exon
subclass of: SO_0000010

117722492
type: Gene
SIO_000068: ncbigene

position:2505211:1
position: 2505211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505955:1
position: 2505955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2505211-2505955:1:exon

LOC117722492
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117722492
product: high mobility group protein B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521677.1
SIO_010081: LOC117722492
subclass of: SO_0000673
so part of: LOC117722492
location: 2505211..2505955
location: region:2505211-2505955:1
so has part: feature:2505211-2505955:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2505211-2505955:1:exon

LOC117722492
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117722492
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein B1-like
translation: MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKTDKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDEEEDEEDEEEEEEEEDEDEEEDDDDE
SIO_010081: LOC117722492
subclass of: SO_0000673
so part of: LOC117722492
location: 2505308..2505955
location: region:2505308-2505955:1
so has part: feature:2505308-2505955:1:exon

XP_034377568.1
type: Protein
SIO_000068: ncbiprotein

position:2505308:1
position: 2505308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2505308-2505955:1:exon

LOC117722559
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2779199..2779527
location: region:2779199-2779527:1
so has part: feature:2779199-2779527:1:exon
subclass of: SO_0000010

117722559
type: Gene
SIO_000068: ncbigene

position:2779199:1
position: 2779199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2779527:1
position: 2779527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2779199-2779527:1:exon

LOC117722559
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117722559
product: cytochrome c oxidase subunit 7C, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521785.1
SIO_010081: LOC117722559
subclass of: SO_0000673
so part of: LOC117722559
location: 2779199..2779527
location: region:2779199-2779527:1
so has part: feature:2779199-2779527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2779199-2779527:1:exon

LOC117722559
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117722559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 7C, mitochondrial-like
translation: MLGQSIRRFTTFVVPRSHYEEGPGKNLPFSVENKWRLLAMMTVYFGSGFAAPFFIVRHQLLKK
SIO_010081: LOC117722559
subclass of: SO_0000673
so part of: LOC117722559
location: 2779223..2779414
location: region:2779223-2779414:1
so has part: feature:2779223-2779414:1:exon

XP_034377676.1
type: Protein
SIO_000068: ncbiprotein

position:2779223:1
position: 2779223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2779414:1
position: 2779414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2779223-2779414:1:exon

Fbxl17
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Fbxl17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2876558..3297821
location: region:2876558-3297821:1
so has part: feature:2876558-3297821:1:exon
subclass of: SO_0000010

117722244
type: Gene
SIO_000068: ncbigene

position:2876558:1
position: 2876558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3297821:1
position: 3297821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2876558-3297821:1:exon

Fbxl17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fbxl17
product: F-box and leucine rich repeat protein 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034521241.1
SIO_010081: Fbxl17
subclass of: SO_0000673
so part of: Fbxl17
location: join(2876558..2877588,2888461..2888583,2891325..2891582,2904577..2904708,2990056..2990163,3016835..3016965,3148989..3149065,3277415..3277557,3295176..3297821)
location: region:2876558-3297821:1
so has part: feature:2876558-2877588:1:exon
so has part: feature:2888461-2888583:1:exon
so has part: feature:2891325-2891582:1:exon
so has part: feature:2904577-2904708:1:exon
so has part: feature:2990056-2990163:1:exon
so has part: feature:3016835-3016965:1:exon
so has part: feature:3148989-3149065:1:exon
so has part: feature:3277415-3277557:1:exon
so has part: feature:3295176-3297821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2876558-2877588:1:exon

position:2877588:1
position: 2877588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2888461-2888583:1:exon

position:2888461:1
position: 2888461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2888583:1
position: 2888583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2891325-2891582:1:exon

position:2891325:1
position: 2891325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2891582:1
position: 2891582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2904577-2904708:1:exon

position:2904577:1
position: 2904577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2904708:1
position: 2904708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2990056-2990163:1:exon

position:2990056:1
position: 2990056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2990163:1
position: 2990163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3016835-3016965:1:exon

position:3016835:1
position: 3016835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3016965:1
position: 3016965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3148989-3149065:1:exon

position:3148989:1
position: 3148989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3149065:1
position: 3149065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3277415-3277557:1:exon

position:3277415:1
position: 3277415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3277557:1
position: 3277557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3295176-3297821:1:exon

position:3295176:1
position: 3295176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fbxl17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fbxl17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein 17
translation: MGHLLSKEPRNCPSQKRPRCCSWCRRRRPLLRLPRRTPAKASPQPAAPRSRDCFFRGPCMLCFIVHSPGAPAPAGLEEEPPLSPPPRDGAYAAVSSQHLARRYAALAAEDCAAAARRFLLSSAAASSPASCCKELGLAAAAAAWEQQGRSLFLAGVGPVRFLGPPAALQLFRGPPAPPQAEPTTVLEMVCKRKGAGVPACTPCKQPRCGGGGCGGGGGGGGGPAGGGASPPRPPDAGCCQAPEQPPPPLCPAPASPASECVPIEAAAGDAVRAGGTAPLSAQQQPESGDADCQEPHENPCDCHREPPPEIPDINQLPPSILLKIFSNLSLDERCLSASLVCKYWRDLCLDFQFWKQLDLSSRQQVTDELLEKIASRSQNIIEINISDCRSMSDTGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRDLKDIHFGQCYKISDEGMIVIAKSCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVIHLTKLRNLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGQYSVTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDCKRTLERAYQMGWTPSMSAATS
SIO_010081: Fbxl17
subclass of: SO_0000673
so part of: Fbxl17
location: join(2876620..2877588,2888461..2888583,2891325..2891582,2904577..2904708,2990056..2990163,3016835..3016965,3148989..3149065,3277415..3277557,3295176..3295316)
location: region:2876620-3295316:1
so has part: feature:2876620-2877588:1:exon
so has part: feature:2888461-2888583:1:exon
so has part: feature:2891325-2891582:1:exon
so has part: feature:2904577-2904708:1:exon
so has part: feature:2990056-2990163:1:exon
so has part: feature:3016835-3016965:1:exon
so has part: feature:3148989-3149065:1:exon
so has part: feature:3277415-3277557:1:exon
so has part: feature:3295176-3295316:1:exon

XP_034377132.1
type: Protein
SIO_000068: ncbiprotein

position:2876620:1
position: 2876620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3295316:1
position: 3295316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2876620-2877588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888461-2888583:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2891325-2891582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2904577-2904708:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2990056-2990163:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3016835-3016965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3148989-3149065:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3277415-3277557:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3295176-3295316:1:exon

LOC117722839
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722839
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(3168910..3169033)
location: region:3168910-3169033:-1
so has part: feature:3168910-3169033:-1:exon

117722839
type: Gene
SIO_000068: ncbigene

position:3168910:-1
position: 3168910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3169033:-1
position: 3169033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3168910-3169033:-1:exon

LOC117722839
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722839
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117722839
subclass of: SO_0000673
so part of: LOC117722839
location: complement(3168910..3169033)
location: region:3168910-3169033:-1
so has part: feature:3168910-3169033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3168910-3169033:-1:exon

Efna5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Efna5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3483521..3759321
location: region:3483521-3759321:1
so has part: feature:3483521-3759321:1:exon
subclass of: SO_0000010

117722397
type: Gene
SIO_000068: ncbigene

position:3483521:1
position: 3483521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3759321:1
position: 3759321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3483521-3759321:1:exon

Efna5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Efna5
product: ephrin A5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521520.1
SIO_010081: Efna5
subclass of: SO_0000673
so part of: Efna5
location: join(3483521..3484253,3712447..3712739,3749010..3749075,3755465..3759321)
location: region:3483521-3759321:1
so has part: feature:3483521-3484253:1:exon
so has part: feature:3712447-3712739:1:exon
so has part: feature:3749010-3749075:1:exon
so has part: feature:3755465-3759321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3483521-3484253:1:exon

position:3484253:1
position: 3484253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3712447-3712739:1:exon

position:3712447:1
position: 3712447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3712739:1
position: 3712739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3749010-3749075:1:exon

position:3749010:1
position: 3749010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3749075:1
position: 3749075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3755465-3759321:1:exon

position:3755465:1
position: 3755465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Efna5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Efna5
product: ephrin A5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521519.1
SIO_010081: Efna5
subclass of: SO_0000673
so part of: Efna5
location: join(3483522..3484253,3712447..3712739,3749010..3749075,3749496..3749576,3755465..3759321)
location: region:3483522-3759321:1
so has part: feature:3483522-3484253:1:exon
so has part: feature:3712447-3712739:1:exon
so has part: feature:3749010-3749075:1:exon
so has part: feature:3749496-3749576:1:exon
so has part: feature:3755465-3759321:1:exon

position:3483522:1
position: 3483522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3483522-3484253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3712447-3712739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3749010-3749075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3749496-3749576:1:exon

position:3749496:1
position: 3749496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3749576:1
position: 3749576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3755465-3759321:1:exon

Efna5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Efna5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-A5 isoform X1
translation: MLHVEMLTLLFLVLWMCVFSQDPGSKVVADRYAVYWNSSNPRFQRGDYHIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFEFRPGREYFYISSAIPDNGRRSCLKLKVFVRPTNSCMKTIGVHDRVFDVNDKVENSLEPADDTVHESAEPSRGENAAQTPRIPSRLLAILLFLLAMLLTL
SIO_010081: Efna5
subclass of: SO_0000673
so part of: Efna5
location: join(3484129..3484253,3712447..3712739,3749010..3749075,3749496..3749576,3755465..3755586)
location: region:3484129-3755586:1
so has part: feature:3484129-3484253:1:exon
so has part: feature:3712447-3712739:1:exon
so has part: feature:3749010-3749075:1:exon
so has part: feature:3749496-3749576:1:exon
so has part: feature:3755465-3755586:1:exon

XP_034377410.1
type: Protein
SIO_000068: ncbiprotein

position:3484129:1
position: 3484129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755586:1
position: 3755586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3484129-3484253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3712447-3712739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3749010-3749075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3749496-3749576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755465-3755586:1:exon

Efna5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Efna5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-A5 isoform X2
translation: MLHVEMLTLLFLVLWMCVFSQDPGSKVVADRYAVYWNSSNPRFQRGDYHIDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFEFRPGREYFYISSAIPDNGRRSCLKLKVFVRPTNDTVHESAEPSRGENAAQTPRIPSRLLAILLFLLAMLLTL
SIO_010081: Efna5
subclass of: SO_0000673
so part of: Efna5
location: join(3484129..3484253,3712447..3712739,3749010..3749075,3755465..3755586)
location: region:3484129-3755586:1
so has part: feature:3484129-3484253:1:exon
so has part: feature:3712447-3712739:1:exon
so has part: feature:3749010-3749075:1:exon
so has part: feature:3755465-3755586:1:exon

XP_034377411.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3484129-3484253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3712447-3712739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3749010-3749075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3755465-3755586:1:exon

LOC117722707
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4026361..4027481)
location: region:4026361-4027481:-1
so has part: feature:4026361-4027481:-1:exon
subclass of: SO_0000010

117722707
type: Gene
SIO_000068: ncbigene

position:4026361:-1
position: 4026361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4027481:-1
position: 4027481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4026361-4027481:-1:exon

LOC117722707
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117722707
product: histone H1.8-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_034521964.1
SIO_010081: LOC117722707
subclass of: SO_0000673
so part of: LOC117722707
location: complement(4026361..4027481)
location: region:4026361-4027481:-1
so has part: feature:4026361-4027481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4026361-4027481:-1:exon

LOC117722707
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117722707
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone H1.8-like
translation: MPNSGERKLVEFASSRKIPGHQVKRWGCHPTVKNSGPECAPAWPAAACALAPGSVSSVSSSSSSPSMDTSPSGSCGLPGADEPGPSFSRIQVGQRNPTMLHMVLEALRAGEKRQGTSVVAIKVYIQHKYPTVDTTRFKYLLKQALETGVHRGLLTRPANSKARGATGSFKLVSKPKKKKSCAPKARRGAAGAKEIGPKKSGLLKKDQVGKSKTQKAALKPGQKRKAYPCSAVTLELAPKKAKAKPRDVRKAPLKQGKVAGDRLTSKGQKVKHSESKQGADAHGKTKGVCEKSKPSANKVQNSVASLANTETVVQGAKTVQKTKAPTPSQDMGHKAQPTPRARKTKTPENPKRPELPPKTSSKAPSKKAEARS
SIO_010081: LOC117722707
subclass of: SO_0000673
so part of: LOC117722707
location: complement(4026361..4027481)
location: region:4026361-4027481:-1
so has part: feature:4026361-4027481:-1:exon

XP_034377855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4026361-4027481:-1:exon

LOC117722708
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722708
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4502951..4503451
location: region:4502951-4503451:1
so has part: feature:4502951-4503451:1:exon

117722708
type: Gene
SIO_000068: ncbigene

position:4502951:1
position: 4502951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4503451:1
position: 4503451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4502951-4503451:1:exon

LOC117722708
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722708
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722708
subclass of: SO_0000673
so part of: LOC117722708
location: 4502951..4503451
location: region:4502951-4503451:1
so has part: feature:4502951-4503451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4502951-4503451:1:exon

LOC117722584
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6435247..6436654)
location: region:6435247-6436654:-1
so has part: feature:6435247-6436654:-1:exon

117722584
type: Gene
SIO_000068: ncbigene

position:6435247:-1
position: 6435247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6436654:-1
position: 6436654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6435247-6436654:-1:exon

LOC117722584
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722584
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722584
subclass of: SO_0000673
so part of: LOC117722584
location: complement(6435247..6436654)
location: region:6435247-6436654:-1
so has part: feature:6435247-6436654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6435247-6436654:-1:exon

LOC117722803
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722803
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6705965..6706067
location: region:6705965-6706067:1
so has part: feature:6705965-6706067:1:exon
subclass of: SO_0000623

117722803
type: Gene
SIO_000068: ncbigene

position:6705965:1
position: 6705965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6706067:1
position: 6706067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6705965-6706067:1:exon

LOC117722803
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117722803
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608574.1
SIO_010081: LOC117722803
subclass of: SO_0000673
so part of: LOC117722803
location: 6705965..6706067
location: region:6705965-6706067:1
so has part: feature:6705965-6706067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6705965-6706067:1:exon

LOC117722814
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722814
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6866867..6866974)
location: region:6866867-6866974:-1
so has part: feature:6866867-6866974:-1:exon
subclass of: SO_0000623

117722814
type: Gene
SIO_000068: ncbigene

position:6866867:-1
position: 6866867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6866974:-1
position: 6866974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6866867-6866974:-1:exon

LOC117722814
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117722814
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608583.1
SIO_010081: LOC117722814
subclass of: SO_0000673
so part of: LOC117722814
location: complement(6866867..6866974)
location: region:6866867-6866974:-1
so has part: feature:6866867-6866974:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6866867-6866974:-1:exon

LOC117722846
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722846
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7030420..7030547
location: region:7030420-7030547:1
so has part: feature:7030420-7030547:1:exon
subclass of: SO_0000578

117722846
type: Gene
SIO_000068: ncbigene

position:7030420:1
position: 7030420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7030547:1
position: 7030547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7030420-7030547:1:exon

LOC117722846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117722846
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608606.1
SIO_010081: LOC117722846
subclass of: SO_0000673
so part of: LOC117722846
location: 7030420..7030547
location: region:7030420-7030547:1
so has part: feature:7030420-7030547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7030420-7030547:1:exon

Nudt12
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Nudt12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7213695..7227603
location: region:7213695-7227603:1
so has part: feature:7213695-7227603:1:exon
subclass of: SO_0000010

117722591
type: Gene
SIO_000068: ncbigene

position:7213695:1
position: 7213695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7227603:1
position: 7227603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7213695-7227603:1:exon

Nudt12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nudt12
product: nudix hydrolase 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034521826.1
SIO_010081: Nudt12
subclass of: SO_0000673
so part of: Nudt12
location: join(7213695..7213795,7215872..7216083,7216683..7217272,7219500..7219667,7220681..7220794,7223609..7223808,7225048..7227603)
location: region:7213695-7227603:1
so has part: feature:7213695-7213795:1:exon
so has part: feature:7215872-7216083:1:exon
so has part: feature:7216683-7217272:1:exon
so has part: feature:7219500-7219667:1:exon
so has part: feature:7220681-7220794:1:exon
so has part: feature:7223609-7223808:1:exon
so has part: feature:7225048-7227603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7213695-7213795:1:exon

position:7213795:1
position: 7213795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7215872-7216083:1:exon

position:7215872:1
position: 7215872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7216083:1
position: 7216083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7216683-7217272:1:exon

position:7216683:1
position: 7216683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7217272:1
position: 7217272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7219500-7219667:1:exon

position:7219500:1
position: 7219500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7219667:1
position: 7219667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7220681-7220794:1:exon

position:7220681:1
position: 7220681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7220794:1
position: 7220794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7223609-7223808:1:exon

position:7223609:1
position: 7223609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7223808:1
position: 7223808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7225048-7227603:1:exon

position:7225048:1
position: 7225048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nudt12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nudt12
product: nudix hydrolase 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034521828.1
SIO_010081: Nudt12
subclass of: SO_0000673
so part of: Nudt12
location: join(7213724..7213795,7215872..7216083,7216683..7217272,7219500..7219667,7220681..7220794,7225048..7227603)
location: region:7213724-7227603:1
so has part: feature:7213724-7213795:1:exon
so has part: feature:7215872-7216083:1:exon
so has part: feature:7216683-7217272:1:exon
so has part: feature:7219500-7219667:1:exon
so has part: feature:7220681-7220794:1:exon
so has part: feature:7225048-7227603:1:exon

position:7213724:1
position: 7213724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7213724-7213795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7215872-7216083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7216683-7217272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7219500-7219667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7220681-7220794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7225048-7227603:1:exon

Nudt12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nudt12
product: nudix hydrolase 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521827.1
SIO_010081: Nudt12
subclass of: SO_0000673
so part of: Nudt12
location: join(7213724..7213795,7215876..7216083,7216683..7217272,7219500..7219667,7220681..7220794,7223609..7223808,7225048..7227603)
location: region:7213724-7227603:1
so has part: feature:7213724-7213795:1:exon
so has part: feature:7215876-7216083:1:exon
so has part: feature:7216683-7217272:1:exon
so has part: feature:7219500-7219667:1:exon
so has part: feature:7220681-7220794:1:exon
so has part: feature:7223609-7223808:1:exon
so has part: feature:7225048-7227603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7213724-7213795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7215876-7216083:1:exon

position:7215876:1
position: 7215876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7216683-7217272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7219500-7219667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7220681-7220794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7223609-7223808:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7225048-7227603:1:exon

Nudt12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nudt12
product: nudix hydrolase 12, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034521830.1
SIO_010081: Nudt12
subclass of: SO_0000673
so part of: Nudt12
location: join(7213724..7213795,7215872..7216083,7216683..7217272,7219500..7219667,7220681..7220794,7222521..7222618)
location: region:7213724-7222618:1
so has part: feature:7213724-7213795:1:exon
so has part: feature:7215872-7216083:1:exon
so has part: feature:7216683-7217272:1:exon
so has part: feature:7219500-7219667:1:exon
so has part: feature:7220681-7220794:1:exon
so has part: feature:7222521-7222618:1:exon

position:7222618:1
position: 7222618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7213724-7213795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7215872-7216083:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7216683-7217272:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7219500-7219667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7220681-7220794:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7222521-7222618:1:exon

position:7222521:1
position: 7222521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nudt12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nudt12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal NADH pyrophosphatase NUDT12 isoform X2
translation: MSSVKRNPKREMISELHSSAAEGNVAKLAGILSHSPSLLNETCENGWTALMYAARNGHPDVVQILLDKGCDKSLVNKSRQTALDIAVFWGYRHIANLLANAKGGKKPWFLTNEVDECENYFSRTLLDRKSDKRNNSDWLQAKESHPATVYILFSDLNPLVTLGGNKESSQQPEVRLCQLNYTDIKGYLAQPEKITLVFLGVELEMKKGSQAHARGGPEEEEDGLVAWFALGIEPGAAEEFKQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGSATKIEEGGYKRVCVKENCPSLLGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPGCGCSYQREAASILCATEPSYCTSVNQTLGWNEPQSLNEKY
SIO_010081: Nudt12
subclass of: SO_0000673
so part of: Nudt12
location: join(7215878..7216083,7216683..7217272,7219500..7219667,7220681..7220794,7225048..7225172)
location: region:7215878-7225172:1
so has part: feature:7215878-7216083:1:exon
so has part: feature:7216683-7217272:1:exon
so has part: feature:7219500-7219667:1:exon
so has part: feature:7220681-7220794:1:exon
so has part: feature:7225048-7225172:1:exon

XP_034377719.1
type: Protein
SIO_000068: ncbiprotein

position:7215878:1
position: 7215878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7225172:1
position: 7225172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7215878-7216083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7216683-7217272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7219500-7219667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7220681-7220794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7225048-7225172:1:exon

Nudt12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nudt12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal NADH pyrophosphatase NUDT12 isoform X1
translation: MSSVKRNPKREMISELHSSAAEGNVAKLAGILSHSPSLLNETCENGWTALMYAARNGHPDVVQILLDKGCDKSLVNKSRQTALDIAVFWGYRHIANLLANAKGGKKPWFLTNEVDECENYFSRTLLDRKSDKRNNSDWLQAKESHPATVYILFSDLNPLVTLGGNKESSQQPEVRLCQLNYTDIKGYLAQPEKITLVFLGVELEMKKGSQAHARGGPEEEEDGLVAWFALGIEPGAAEEFKQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGSATKIEEGGYKRVCVKENCPSLLGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQYVSCQPWPMPSSLMIGCLAVAVSTEIKVDKNEIEDARWFTREQVVDVLTKGKQQAFFVPPSRAIAHQLIKHWVGMNPNL
SIO_010081: Nudt12
subclass of: SO_0000673
so part of: Nudt12
location: join(7215878..7216083,7216683..7217272,7219500..7219667,7220681..7220794,7223609..7223808,7225048..7225158)
location: region:7215878-7225158:1
so has part: feature:7215878-7216083:1:exon
so has part: feature:7216683-7217272:1:exon
so has part: feature:7219500-7219667:1:exon
so has part: feature:7220681-7220794:1:exon
so has part: feature:7223609-7223808:1:exon
so has part: feature:7225048-7225158:1:exon

XP_034377717.1
type: Protein
SIO_000068: ncbiprotein

position:7225158:1
position: 7225158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7215878-7216083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7216683-7217272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7219500-7219667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7220681-7220794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7223609-7223808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7225048-7225158:1:exon

Nudt12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nudt12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal NADH pyrophosphatase NUDT12 isoform X1
translation: MSSVKRNPKREMISELHSSAAEGNVAKLAGILSHSPSLLNETCENGWTALMYAARNGHPDVVQILLDKGCDKSLVNKSRQTALDIAVFWGYRHIANLLANAKGGKKPWFLTNEVDECENYFSRTLLDRKSDKRNNSDWLQAKESHPATVYILFSDLNPLVTLGGNKESSQQPEVRLCQLNYTDIKGYLAQPEKITLVFLGVELEMKKGSQAHARGGPEEEEDGLVAWFALGIEPGAAEEFKQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGSATKIEEGGYKRVCVKENCPSLLGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPGETIEDAVRREVEEESGVKVGHVQYVSCQPWPMPSSLMIGCLAVAVSTEIKVDKNEIEDARWFTREQVVDVLTKGKQQAFFVPPSRAIAHQLIKHWVGMNPNL
SIO_010081: Nudt12
subclass of: SO_0000673
so part of: Nudt12
location: join(7215878..7216083,7216683..7217272,7219500..7219667,7220681..7220794,7223609..7223808,7225048..7225158)
location: region:7215878-7225158:1
so has part: feature:7215878-7216083:1:exon
so has part: feature:7216683-7217272:1:exon
so has part: feature:7219500-7219667:1:exon
so has part: feature:7220681-7220794:1:exon
so has part: feature:7223609-7223808:1:exon
so has part: feature:7225048-7225158:1:exon

XP_034377718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7215878-7216083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7216683-7217272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7219500-7219667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7220681-7220794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7223609-7223808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7225048-7225158:1:exon

Nudt12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nudt12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal NADH pyrophosphatase NUDT12 isoform X3
translation: MSSVKRNPKREMISELHSSAAEGNVAKLAGILSHSPSLLNETCENGWTALMYAARNGHPDVVQILLDKGCDKSLVNKSRQTALDIAVFWGYRHIANLLANAKGGKKPWFLTNEVDECENYFSRTLLDRKSDKRNNSDWLQAKESHPATVYILFSDLNPLVTLGGNKESSQQPEVRLCQLNYTDIKGYLAQPEKITLVFLGVELEMKKGSQAHARGGPEEEEDGLVAWFALGIEPGAAEEFKQRHENCYFLHPPMPALLQLKEKEAGVVAQARSVLAWHSRYKFCPTCGSATKIEEGGYKRVCVKENCPSLLGVHNTSYPRVDPVVIMQVIHPDGTKCLLGRQKRFPPGMFTCLAGFIEPDELPTFGDPRALVAQVLQL
SIO_010081: Nudt12
subclass of: SO_0000673
so part of: Nudt12
location: join(7215878..7216083,7216683..7217272,7219500..7219667,7220681..7220794,7222521..7222579)
location: region:7215878-7222579:1
so has part: feature:7215878-7216083:1:exon
so has part: feature:7216683-7217272:1:exon
so has part: feature:7219500-7219667:1:exon
so has part: feature:7220681-7220794:1:exon
so has part: feature:7222521-7222579:1:exon

XP_034377721.1
type: Protein
SIO_000068: ncbiprotein

position:7222579:1
position: 7222579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7215878-7216083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7216683-7217272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7219500-7219667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7220681-7220794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7222521-7222579:1:exon

LOC117722474
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7234138..7360748
location: region:7234138-7360748:1
so has part: feature:7234138-7360748:1:exon
subclass of: SO_0000010

117722474
type: Gene
SIO_000068: ncbigene

position:7234138:1
position: 7234138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7360748:1
position: 7360748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7234138-7360748:1:exon

LOC117722474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117722474
product: uncharacterized LOC117722474
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034521647.1
SIO_010081: LOC117722474
subclass of: SO_0000673
so part of: LOC117722474
location: join(7234138..7234229,7251133..7253454,7258334..7258525,7273191..7273358,7277712..7277813,7293846..7293956,7307831..7308009,7347526..7347683,7349836..7349878,7351662..7351848,7358464..7358599,7360383..7360748)
location: region:7234138-7360748:1
so has part: feature:7234138-7234229:1:exon
so has part: feature:7251133-7253454:1:exon
so has part: feature:7258334-7258525:1:exon
so has part: feature:7273191-7273358:1:exon
so has part: feature:7277712-7277813:1:exon
so has part: feature:7293846-7293956:1:exon
so has part: feature:7307831-7308009:1:exon
so has part: feature:7347526-7347683:1:exon
so has part: feature:7349836-7349878:1:exon
so has part: feature:7351662-7351848:1:exon
so has part: feature:7358464-7358599:1:exon
so has part: feature:7360383-7360748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7234138-7234229:1:exon

position:7234229:1
position: 7234229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7251133-7253454:1:exon

position:7251133:1
position: 7251133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7253454:1
position: 7253454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7258334-7258525:1:exon

position:7258334:1
position: 7258334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7258525:1
position: 7258525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7273191-7273358:1:exon

position:7273191:1
position: 7273191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7273358:1
position: 7273358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7277712-7277813:1:exon

position:7277712:1
position: 7277712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7277813:1
position: 7277813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7293846-7293956:1:exon

position:7293846:1
position: 7293846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7293956:1
position: 7293956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7307831-7308009:1:exon

position:7307831:1
position: 7307831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7308009:1
position: 7308009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7347526-7347683:1:exon

position:7347526:1
position: 7347526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7347683:1
position: 7347683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7349836-7349878:1:exon

position:7349836:1
position: 7349836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7349878:1
position: 7349878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7351662-7351848:1:exon

position:7351662:1
position: 7351662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7351848:1
position: 7351848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7358464-7358599:1:exon

position:7358464:1
position: 7358464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7358599:1
position: 7358599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7360383-7360748:1:exon

position:7360383:1
position: 7360383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117722474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117722474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117722474
translation: MENGYPPLATSHQLEEVLPVTMFNDCEKSLPGKITTQDFPNTVEVLKPAKGKFIREVKCGAFNVHVETTKNTFCKTGAQFLTKRRCPTCHQHYSVQKVWRNSKSRGRFSKYSTVLTEEFKHRVPSTYIREVSRSELPSTNINIVGKRIMVEYVSKNQNIFINICHPKITGKSTKHRKGFLNHTTNEPCESPSQPGINHPENQGRGNQNQSSDALHDAPCSVNTVQNVDSDTVVVSLSLLPKRGKKKPNTLPSAPDDSEERDSATSQQKVLQITQDKPPEQHHLTADTCLPTSSETLRTTSLNNGDLSKTSFEGSRDVDEERKPSSDVRENITSDSQVQSCTAGTNGPLSAVNGMIPIQDASDSEFCTLSSLTLQLLGEKADNIGCRGDKTIPGEDYESPNSISFPVSEQATKPSPLLSPSHWVSRCSKPVGTPGNAFSFRQYIGVETEQEKVHYRDINKAILHSDSSANTQPLERMNPQSPAVRIASCSSLVPKSPLHGNIHSSVEWDQTEDHANHVDRAGLSRTEVPVMASITDELEQRLTTQKYIEGTVDSNSPRAMRNPRKSNSYLESVEDDTYQALVVVKNICHRDFEDLPSEDQNEICSHMDFSQNSTESTCVGHPTEKLFLIDKTLTSNKDPNSNGNHKTCGLNNFPEEPAECQRTTSRVYCEESGNRRHLTEASYHPVDILLSPQKQKTLKDQNLEINNPRKLSQELPLRGGRASDGSQEEAIDQWARQRQQFKDGKRCSSAGGSSVISNFTEGSVTSDDAHSVDFGFRVDIEETGFYTENFHSTAWVFRGDDGNPEDSPRCLSKKQRPVAVRERTVRLFKGTGDYPWGFRIQFSKPIVVTEVDTNSAAEEAGLQIGDVVLSVNGTEVTSVEHAEAVQLAKKGPDILTMVVASDISRCPNTPWPTCRGYLHKRTQSGFVRGWRKRWFVLKHDGFLLYYKHRKDEGKWPPLDIIKLEGAEVDIDNSLGKPFVFNCMPQSRSRIFCLCATSNQEMKRWLEAMQKAASPVRQNHVWEDVTVHNSSLPPLAIKHPECLGLLHQLERSTDVWIQHYCILKDGCLYFYGSIRSTQASGGLYLQGYSVSEQTHGFEQPVIELKPSSGEFKTFYFCAENKTENQRWIAALKTSIKKWLPLDQAIQEFMNRPLEETRM
SIO_010081: LOC117722474
subclass of: SO_0000673
so part of: LOC117722474
location: join(7251360..7253454,7258334..7258525,7273191..7273358,7277712..7277813,7293846..7293956,7307831..7308009,7347526..7347683,7349836..7349878,7351662..7351848,7358464..7358599,7360383..7360482)
location: region:7251360-7360482:1
so has part: feature:7251360-7253454:1:exon
so has part: feature:7258334-7258525:1:exon
so has part: feature:7273191-7273358:1:exon
so has part: feature:7277712-7277813:1:exon
so has part: feature:7293846-7293956:1:exon
so has part: feature:7307831-7308009:1:exon
so has part: feature:7347526-7347683:1:exon
so has part: feature:7349836-7349878:1:exon
so has part: feature:7351662-7351848:1:exon
so has part: feature:7358464-7358599:1:exon
so has part: feature:7360383-7360482:1:exon

XP_034377538.1
type: Protein
SIO_000068: ncbiprotein

position:7251360:1
position: 7251360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7360482:1
position: 7360482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7251360-7253454:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7258334-7258525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7273191-7273358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7277712-7277813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7293846-7293956:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7307831-7308009:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7347526-7347683:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7349836-7349878:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7351662-7351848:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7358464-7358599:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7360383-7360482:1:exon

LOC117722475
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722475
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7259736..7262163)
location: region:7259736-7262163:-1
so has part: feature:7259736-7262163:-1:exon

117722475
type: Gene
SIO_000068: ncbigene

position:7259736:-1
position: 7259736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7262163:-1
position: 7262163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7259736-7262163:-1:exon

LOC117722475
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722475
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117722475
subclass of: SO_0000673
so part of: LOC117722475
location: complement(7259736..7260781)
location: region:7259736-7260781:-1
so has part: feature:7259736-7260781:-1:exon

position:7260781:-1
position: 7260781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7259736-7260781:-1:exon

LOC117722475
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722475
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC117722475
subclass of: SO_0000673
so part of: LOC117722475
location: complement(7260818..7262163)
location: region:7260818-7262163:-1
so has part: feature:7260818-7262163:-1:exon

position:7260818:-1
position: 7260818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7260818-7262163:-1:exon

LOC117722183
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7472222..7472912)
location: region:7472222-7472912:-1
so has part: feature:7472222-7472912:-1:exon

117722183
type: Gene
SIO_000068: ncbigene

position:7472222:-1
position: 7472222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7472912:-1
position: 7472912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7472222-7472912:-1:exon

LOC117722183
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722183
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722183
subclass of: SO_0000673
so part of: LOC117722183
location: complement(7472222..7472912)
location: region:7472222-7472912:-1
so has part: feature:7472222-7472912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7472222-7472912:-1:exon

Macir
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Macir
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7506391..7525913)
location: region:7506391-7525913:-1
so has part: feature:7506391-7525913:-1:exon
subclass of: SO_0000010

117722417
type: Gene
SIO_000068: ncbigene

position:7506391:-1
position: 7506391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7525913:-1
position: 7525913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7506391-7525913:-1:exon

Macir
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Macir
product: macrophage immunometabolism regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521559.1
SIO_010081: Macir
subclass of: SO_0000673
so part of: Macir
location: complement(join(7506391..7508857,7518515..7518604,7525726..7525913))
location: region:7506391-7525913:-1
so has part: feature:7525726-7525913:-1:exon
so has part: feature:7518515-7518604:-1:exon
so has part: feature:7506391-7508857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7525726-7525913:-1:exon

position:7525726:-1
position: 7525726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7518515-7518604:-1:exon

position:7518515:-1
position: 7518515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7518604:-1
position: 7518604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7506391-7508857:-1:exon

position:7508857:-1
position: 7508857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Macir
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Macir
product: macrophage immunometabolism regulator, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034521561.1
SIO_010081: Macir
subclass of: SO_0000673
so part of: Macir
location: complement(join(7506391..7508857,7518515..7518604,7525442..7525569))
location: region:7506391-7525569:-1
so has part: feature:7525442-7525569:-1:exon
so has part: feature:7518515-7518604:-1:exon
so has part: feature:7506391-7508857:-1:exon

position:7525569:-1
position: 7525569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7525442-7525569:-1:exon

position:7525442:-1
position: 7525442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7518515-7518604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7506391-7508857:-1:exon

Macir
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Macir
product: macrophage immunometabolism regulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034521558.1
SIO_010081: Macir
subclass of: SO_0000673
so part of: Macir
location: complement(join(7506391..7508857,7518515..7518604,7524547..7524743))
location: region:7506391-7524743:-1
so has part: feature:7524547-7524743:-1:exon
so has part: feature:7518515-7518604:-1:exon
so has part: feature:7506391-7508857:-1:exon

position:7524743:-1
position: 7524743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7524547-7524743:-1:exon

position:7524547:-1
position: 7524547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7518515-7518604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7506391-7508857:-1:exon

Macir
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Macir
product: macrophage immunometabolism regulator, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034521560.1
SIO_010081: Macir
subclass of: SO_0000673
so part of: Macir
location: complement(join(7506391..7508857,7518515..7518604,7524029..7524540))
location: region:7506391-7524540:-1
so has part: feature:7524029-7524540:-1:exon
so has part: feature:7518515-7518604:-1:exon
so has part: feature:7506391-7508857:-1:exon

position:7524540:-1
position: 7524540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7524029-7524540:-1:exon

position:7524029:-1
position: 7524029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7518515-7518604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7506391-7508857:-1:exon

Macir
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Macir
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macrophage immunometabolism regulator
translation: MEVDINGESRSTLTTLPLPVAEGSSPGKAEAEKPRCSSTPCSPMRRTVSGYQILHMDSNYLVGFTTGEELLKLAQKCTGGEDGKGEAMPPLRAKQLDAGLSRSSRLYKTRSRYYQPYEIPAVNGRRRRRMPSSGDKCTKSLPYEPYKALHGPLPLCLLKGKRAHSKSLDYLNLDKMNIKEPADTEVLQYQLQHLTLRGDRVFARNNT
SIO_010081: Macir
subclass of: SO_0000673
so part of: Macir
location: complement(7508211..7508834)
location: region:7508211-7508834:-1
so has part: feature:7508211-7508834:-1:exon

XP_034377449.1
type: Protein
SIO_000068: ncbiprotein

position:7508211:-1
position: 7508211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7508834:-1
position: 7508834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7508211-7508834:-1:exon

Macir
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Macir
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macrophage immunometabolism regulator
translation: MEVDINGESRSTLTTLPLPVAEGSSPGKAEAEKPRCSSTPCSPMRRTVSGYQILHMDSNYLVGFTTGEELLKLAQKCTGGEDGKGEAMPPLRAKQLDAGLSRSSRLYKTRSRYYQPYEIPAVNGRRRRRMPSSGDKCTKSLPYEPYKALHGPLPLCLLKGKRAHSKSLDYLNLDKMNIKEPADTEVLQYQLQHLTLRGDRVFARNNT
SIO_010081: Macir
subclass of: SO_0000673
so part of: Macir
location: complement(7508211..7508834)
location: region:7508211-7508834:-1
so has part: feature:7508211-7508834:-1:exon

XP_034377450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7508211-7508834:-1:exon

Macir
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Macir
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macrophage immunometabolism regulator
translation: MEVDINGESRSTLTTLPLPVAEGSSPGKAEAEKPRCSSTPCSPMRRTVSGYQILHMDSNYLVGFTTGEELLKLAQKCTGGEDGKGEAMPPLRAKQLDAGLSRSSRLYKTRSRYYQPYEIPAVNGRRRRRMPSSGDKCTKSLPYEPYKALHGPLPLCLLKGKRAHSKSLDYLNLDKMNIKEPADTEVLQYQLQHLTLRGDRVFARNNT
SIO_010081: Macir
subclass of: SO_0000673
so part of: Macir
location: complement(7508211..7508834)
location: region:7508211-7508834:-1
so has part: feature:7508211-7508834:-1:exon

XP_034377451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7508211-7508834:-1:exon

Macir
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Macir
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macrophage immunometabolism regulator
translation: MEVDINGESRSTLTTLPLPVAEGSSPGKAEAEKPRCSSTPCSPMRRTVSGYQILHMDSNYLVGFTTGEELLKLAQKCTGGEDGKGEAMPPLRAKQLDAGLSRSSRLYKTRSRYYQPYEIPAVNGRRRRRMPSSGDKCTKSLPYEPYKALHGPLPLCLLKGKRAHSKSLDYLNLDKMNIKEPADTEVLQYQLQHLTLRGDRVFARNNT
SIO_010081: Macir
subclass of: SO_0000673
so part of: Macir
location: complement(7508211..7508834)
location: region:7508211-7508834:-1
so has part: feature:7508211-7508834:-1:exon

XP_034377452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7508211-7508834:-1:exon

Ppip5k2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ppip5k2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7567253..7628848)
location: region:7567253-7628848:-1
so has part: feature:7567253-7628848:-1:exon
subclass of: SO_0000010

117722248
type: Gene
SIO_000068: ncbigene

position:7567253:-1
position: 7567253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7628848:-1
position: 7628848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7567253-7628848:-1:exon

Ppip5k2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ppip5k2
product: diphosphoinositol pentakisphosphate kinase 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 long SRA read, 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521262.1
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7567253..7569066,7573095..7573220,7574477..7574617,7581424..7581496,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600309,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621411,7628296..7628848))
location: region:7567253-7628848:-1
so has part: feature:7628296-7628848:-1:exon
so has part: feature:7621016-7621411:-1:exon
so has part: feature:7618772-7618967:-1:exon
so has part: feature:7616449-7616539:-1:exon
so has part: feature:7615487-7615572:-1:exon
so has part: feature:7614646-7614800:-1:exon
so has part: feature:7612483-7612584:-1:exon
so has part: feature:7610741-7610902:-1:exon
so has part: feature:7609701-7609822:-1:exon
so has part: feature:7608091-7608192:-1:exon
so has part: feature:7606954-7607040:-1:exon
so has part: feature:7605903-7605978:-1:exon
so has part: feature:7605665-7605774:-1:exon
so has part: feature:7604571-7604656:-1:exon
so has part: feature:7600428-7600553:-1:exon
so has part: feature:7600191-7600309:-1:exon
so has part: feature:7599818-7600000:-1:exon
so has part: feature:7594002-7594143:-1:exon
so has part: feature:7592956-7593179:-1:exon
so has part: feature:7592599-7592726:-1:exon
so has part: feature:7591393-7591507:-1:exon
so has part: feature:7588966-7589073:-1:exon
so has part: feature:7588762-7588878:-1:exon
so has part: feature:7585132-7585296:-1:exon
so has part: feature:7581424-7581496:-1:exon
so has part: feature:7574477-7574617:-1:exon
so has part: feature:7573095-7573220:-1:exon
so has part: feature:7567253-7569066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7628296-7628848:-1:exon

position:7628296:-1
position: 7628296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7621016-7621411:-1:exon

position:7621016:-1
position: 7621016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7621411:-1
position: 7621411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7618772-7618967:-1:exon

position:7618772:-1
position: 7618772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7618967:-1
position: 7618967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7616449-7616539:-1:exon

position:7616449:-1
position: 7616449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7616539:-1
position: 7616539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7615487-7615572:-1:exon

position:7615487:-1
position: 7615487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7615572:-1
position: 7615572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7614646-7614800:-1:exon

position:7614646:-1
position: 7614646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7614800:-1
position: 7614800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7612483-7612584:-1:exon

position:7612483:-1
position: 7612483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7612584:-1
position: 7612584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7610741-7610902:-1:exon

position:7610741:-1
position: 7610741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7610902:-1
position: 7610902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7609701-7609822:-1:exon

position:7609701:-1
position: 7609701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7609822:-1
position: 7609822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7608091-7608192:-1:exon

position:7608091:-1
position: 7608091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7608192:-1
position: 7608192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7606954-7607040:-1:exon

position:7606954:-1
position: 7606954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7607040:-1
position: 7607040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7605903-7605978:-1:exon

position:7605903:-1
position: 7605903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7605978:-1
position: 7605978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7605665-7605774:-1:exon

position:7605665:-1
position: 7605665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7605774:-1
position: 7605774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7604571-7604656:-1:exon

position:7604571:-1
position: 7604571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7604656:-1
position: 7604656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7600428-7600553:-1:exon

position:7600428:-1
position: 7600428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7600553:-1
position: 7600553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7600191-7600309:-1:exon

position:7600191:-1
position: 7600191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7600309:-1
position: 7600309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7599818-7600000:-1:exon

position:7599818:-1
position: 7599818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7600000:-1
position: 7600000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7594002-7594143:-1:exon

position:7594002:-1
position: 7594002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7594143:-1
position: 7594143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7592956-7593179:-1:exon

position:7592956:-1
position: 7592956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7593179:-1
position: 7593179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7592599-7592726:-1:exon

position:7592599:-1
position: 7592599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7592726:-1
position: 7592726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7591393-7591507:-1:exon

position:7591393:-1
position: 7591393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7591507:-1
position: 7591507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7588966-7589073:-1:exon

position:7588966:-1
position: 7588966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7589073:-1
position: 7589073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7588762-7588878:-1:exon

position:7588762:-1
position: 7588762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7588878:-1
position: 7588878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7585132-7585296:-1:exon

position:7585132:-1
position: 7585132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7585296:-1
position: 7585296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7581424-7581496:-1:exon

position:7581424:-1
position: 7581424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7581496:-1
position: 7581496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7574477-7574617:-1:exon

position:7574477:-1
position: 7574477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7574617:-1
position: 7574617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7573095-7573220:-1:exon

position:7573095:-1
position: 7573095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7573220:-1
position: 7573220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7567253-7569066:-1:exon

position:7569066:-1
position: 7569066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ppip5k2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ppip5k2
product: diphosphoinositol pentakisphosphate kinase 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 7 long SRA reads, 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521261.1
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7567253..7569066,7573095..7573220,7574477..7574617,7581424..7581496,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600312,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621411,7628296..7628608))
location: region:7567253-7628608:-1
so has part: feature:7628296-7628608:-1:exon
so has part: feature:7621016-7621411:-1:exon
so has part: feature:7618772-7618967:-1:exon
so has part: feature:7616449-7616539:-1:exon
so has part: feature:7615487-7615572:-1:exon
so has part: feature:7614646-7614800:-1:exon
so has part: feature:7612483-7612584:-1:exon
so has part: feature:7610741-7610902:-1:exon
so has part: feature:7609701-7609822:-1:exon
so has part: feature:7608091-7608192:-1:exon
so has part: feature:7606954-7607040:-1:exon
so has part: feature:7605903-7605978:-1:exon
so has part: feature:7605665-7605774:-1:exon
so has part: feature:7604571-7604656:-1:exon
so has part: feature:7600428-7600553:-1:exon
so has part: feature:7600191-7600312:-1:exon
so has part: feature:7599818-7600000:-1:exon
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so has part: feature:7592956-7593179:-1:exon
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Ppip5k2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ppip5k2
product: diphosphoinositol pentakisphosphate kinase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 long SRA reads, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521258.1
SIO_010081: Ppip5k2
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Ppip5k2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ppip5k2
product: diphosphoinositol pentakisphosphate kinase 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521260.1
SIO_010081: Ppip5k2
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Ppip5k2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ppip5k2
product: diphosphoinositol pentakisphosphate kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 long SRA reads, 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521256.1
SIO_010081: Ppip5k2
subclass of: SO_0000673
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Ppip5k2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ppip5k2
product: diphosphoinositol pentakisphosphate kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521255.1
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
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location: region:7567253-7628488:-1
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position:7628488:-1
position: 7628488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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urn:…
SIO_000300: 31
SIO_000628: feature:7567253-7569066:-1:exon

Ppip5k2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ppip5k2
product: diphosphoinositol pentakisphosphate kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521257.1
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7567253..7569066,7573095..7573220,7574477..7574617,7578179..7578241,7579077..7579196,7581424..7581496,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600312,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621411,7628296..7628465))
location: region:7567253-7628465:-1
so has part: feature:7628296-7628465:-1:exon
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so has part: feature:7573095-7573220:-1:exon
so has part: feature:7567253-7569066:-1:exon

position:7628465:-1
position: 7628465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 30
SIO_000628: feature:7567253-7569066:-1:exon

Ppip5k2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ppip5k2
product: diphosphoinositol pentakisphosphate kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 long SRA read, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521254.1
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7567253..7569066,7573095..7573220,7574477..7574617,7578179..7578241,7579077..7579196,7581424..7581496,7582687..7582860,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600312,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621411,7628296..7628465))
location: region:7567253-7628465:-1
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 31
SIO_000628: feature:7567253-7569066:-1:exon

Ppip5k2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ppip5k2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X8
translation: MSEPPRFFVGPEDAEINPGNYRRFFHHADEEEEEEEDSPPERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRRDVYSILQAEGILLPRYAVLNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSADIQLYHSETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCDESKDEQWKRAMDYLNIVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRSLRIDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKIATSEVVSENANYLRTPRTLVEQKQNPTVGFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEMTSMASRSSPGMRRKISLNTYTPTKILPTPPAVLKSTKASSKAAVGGPSLAMASHTSSRKKSLSSKTEGHEPKKSTGKKR
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7568954..7569066,7573095..7573220,7574477..7574617,7581424..7581496,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600309,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621129))
location: region:7568954-7621129:-1
so has part: feature:7621016-7621129:-1:exon
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so has part: feature:7568954-7569066:-1:exon

XP_034377153.1
type: Protein
SIO_000068: ncbiprotein

position:7568954:-1
position: 7568954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7621129:-1
position: 7621129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7621016-7621129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7618772-7618967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7616449-7616539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615487-7615572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614646-7614800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7612483-7612584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7610741-7610902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7609701-7609822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7608091-7608192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7606954-7607040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7605903-7605978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7605665-7605774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7604571-7604656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7600428-7600553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7600191-7600309:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7599818-7600000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7594002-7594143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7592956-7593179:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7592599-7592726:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7591393-7591507:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7588966-7589073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7588762-7588878:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7585132-7585296:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7581424-7581496:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7574477-7574617:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7573095-7573220:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7568954-7569066:-1:exon

Ppip5k2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ppip5k2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X3
translation: MSEPPRFFVGPEDAEINPGNYRRFFHHADEEEEEEEDSPPERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRRDVYSILQAEGILLPRYAVLNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSADIQLYHSETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCDESKDEQWKRAMDYLNIVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRSLRIDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKIATSEEETPLSVSSPEGTGTWLHYTSGVGTGRRRRRSGEQITSSPVSPKSLAFTSSIFGSWQQVVSENANYLRTPRTLVEQKQNPTVGSHCAGLFSTSVLGGSSSAPNLQDYARTHRKKLTSSGCIDGFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEMTSMASRSSPGMRRKISLNTYTPTKILPTPPAVLKSTKASSKAAVGGPSLAMASHTSSRKKSLSSKTEGHEPKKSTGKKR
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7568954..7569066,7573095..7573220,7574477..7574617,7579077..7579196,7581424..7581496,7582687..7582860,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600309,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621129))
location: region:7568954-7621129:-1
so has part: feature:7621016-7621129:-1:exon
so has part: feature:7618772-7618967:-1:exon
so has part: feature:7616449-7616539:-1:exon
so has part: feature:7615487-7615572:-1:exon
so has part: feature:7614646-7614800:-1:exon
so has part: feature:7612483-7612584:-1:exon
so has part: feature:7610741-7610902:-1:exon
so has part: feature:7609701-7609822:-1:exon
so has part: feature:7608091-7608192:-1:exon
so has part: feature:7606954-7607040:-1:exon
so has part: feature:7605903-7605978:-1:exon
so has part: feature:7605665-7605774:-1:exon
so has part: feature:7604571-7604656:-1:exon
so has part: feature:7600428-7600553:-1:exon
so has part: feature:7600191-7600309:-1:exon
so has part: feature:7599818-7600000:-1:exon
so has part: feature:7594002-7594143:-1:exon
so has part: feature:7592956-7593179:-1:exon
so has part: feature:7592599-7592726:-1:exon
so has part: feature:7591393-7591507:-1:exon
so has part: feature:7588966-7589073:-1:exon
so has part: feature:7588762-7588878:-1:exon
so has part: feature:7585132-7585296:-1:exon
so has part: feature:7582687-7582860:-1:exon
so has part: feature:7581424-7581496:-1:exon
so has part: feature:7579077-7579196:-1:exon
so has part: feature:7574477-7574617:-1:exon
so has part: feature:7573095-7573220:-1:exon
so has part: feature:7568954-7569066:-1:exon

XP_034377147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7621016-7621129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7618772-7618967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7616449-7616539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615487-7615572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614646-7614800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7612483-7612584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7610741-7610902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7609701-7609822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7608091-7608192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7606954-7607040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7605903-7605978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7605665-7605774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7604571-7604656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7600428-7600553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7600191-7600309:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7599818-7600000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7594002-7594143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7592956-7593179:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7592599-7592726:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7591393-7591507:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7588966-7589073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7588762-7588878:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7585132-7585296:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7582687-7582860:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7581424-7581496:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7579077-7579196:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7574477-7574617:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7573095-7573220:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7568954-7569066:-1:exon

Ppip5k2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ppip5k2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X2
translation: MSEPPRFFVGPEDAEINPGNYRRFFHHADEEEEEEEDSPPERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRRDVYSILQAEGILLPRYAVLNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSADIQLYHSETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCDESKDEQWKRAMDYLNIVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRSLRIDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKIATSEEETPLSVSSPEGTGTWLHYTSGVGTGRRRRRSGEQITSSPVSPKSLAFTSSIFGSWQQVVSENANYLRTPRTLVEQKQNPTVGSHCAGLFSTSVLGGSSSAPNLQDYARTHRKKLTSSGCIDDATRGSAVKRFSISFARHPTNGFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEMTSMASRSSPGMRRKISLNTYTPTKILPTPPAVLKSTKASSKAAVGGPSLAMASHTSSRKKSLSSKTEGHEPKKSTGKKR
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7568954..7569066,7573095..7573220,7574477..7574617,7578179..7578241,7579077..7579196,7581424..7581496,7582687..7582860,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600309,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621129))
location: region:7568954-7621129:-1
so has part: feature:7621016-7621129:-1:exon
so has part: feature:7618772-7618967:-1:exon
so has part: feature:7616449-7616539:-1:exon
so has part: feature:7615487-7615572:-1:exon
so has part: feature:7614646-7614800:-1:exon
so has part: feature:7612483-7612584:-1:exon
so has part: feature:7610741-7610902:-1:exon
so has part: feature:7609701-7609822:-1:exon
so has part: feature:7608091-7608192:-1:exon
so has part: feature:7606954-7607040:-1:exon
so has part: feature:7605903-7605978:-1:exon
so has part: feature:7605665-7605774:-1:exon
so has part: feature:7604571-7604656:-1:exon
so has part: feature:7600428-7600553:-1:exon
so has part: feature:7600191-7600309:-1:exon
so has part: feature:7599818-7600000:-1:exon
so has part: feature:7594002-7594143:-1:exon
so has part: feature:7592956-7593179:-1:exon
so has part: feature:7592599-7592726:-1:exon
so has part: feature:7591393-7591507:-1:exon
so has part: feature:7588966-7589073:-1:exon
so has part: feature:7588762-7588878:-1:exon
so has part: feature:7585132-7585296:-1:exon
so has part: feature:7582687-7582860:-1:exon
so has part: feature:7581424-7581496:-1:exon
so has part: feature:7579077-7579196:-1:exon
so has part: feature:7578179-7578241:-1:exon
so has part: feature:7574477-7574617:-1:exon
so has part: feature:7573095-7573220:-1:exon
so has part: feature:7568954-7569066:-1:exon

XP_034377146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7621016-7621129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7618772-7618967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7616449-7616539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615487-7615572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614646-7614800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7612483-7612584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7610741-7610902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7609701-7609822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7608091-7608192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7606954-7607040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7605903-7605978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7605665-7605774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7604571-7604656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7600428-7600553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7600191-7600309:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7599818-7600000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7594002-7594143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7592956-7593179:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7592599-7592726:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7591393-7591507:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7588966-7589073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7588762-7588878:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7585132-7585296:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7582687-7582860:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7581424-7581496:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7579077-7579196:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7578179-7578241:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7574477-7574617:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7573095-7573220:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7568954-7569066:-1:exon

Ppip5k2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ppip5k2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X7
translation: MSEPPRFFVGPEDAEINPGNYRRFFHHADEEEEEEEDSPPERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRRDVYSILQAEGILLPRYAVLNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSADIQLYHSETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCDESKDEQWKRAMDYLNIVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRSLRIDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKIATSEVVSENANYLRTPRTLVEQKQNPTVGFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEMTSMASRSSPGMRRKISLNTYTPTKILPTPPAVLKSTKASSKAAVGGPSLAMASHTSSRKKSLSSKTEGHEPKKSTGKKR
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7568954..7569066,7573095..7573220,7574477..7574617,7581424..7581496,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600312,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621129))
location: region:7568954-7621129:-1
so has part: feature:7621016-7621129:-1:exon
so has part: feature:7618772-7618967:-1:exon
so has part: feature:7616449-7616539:-1:exon
so has part: feature:7615487-7615572:-1:exon
so has part: feature:7614646-7614800:-1:exon
so has part: feature:7612483-7612584:-1:exon
so has part: feature:7610741-7610902:-1:exon
so has part: feature:7609701-7609822:-1:exon
so has part: feature:7608091-7608192:-1:exon
so has part: feature:7606954-7607040:-1:exon
so has part: feature:7605903-7605978:-1:exon
so has part: feature:7605665-7605774:-1:exon
so has part: feature:7604571-7604656:-1:exon
so has part: feature:7600428-7600553:-1:exon
so has part: feature:7600191-7600312:-1:exon
so has part: feature:7599818-7600000:-1:exon
so has part: feature:7594002-7594143:-1:exon
so has part: feature:7592956-7593179:-1:exon
so has part: feature:7592599-7592726:-1:exon
so has part: feature:7591393-7591507:-1:exon
so has part: feature:7588966-7589073:-1:exon
so has part: feature:7588762-7588878:-1:exon
so has part: feature:7585132-7585296:-1:exon
so has part: feature:7581424-7581496:-1:exon
so has part: feature:7574477-7574617:-1:exon
so has part: feature:7573095-7573220:-1:exon
so has part: feature:7568954-7569066:-1:exon

XP_034377152.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7621016-7621129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7618772-7618967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7616449-7616539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615487-7615572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614646-7614800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7612483-7612584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7610741-7610902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7609701-7609822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7608091-7608192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7606954-7607040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7605903-7605978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7605665-7605774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7604571-7604656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7600428-7600553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7600191-7600312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7599818-7600000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7594002-7594143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7592956-7593179:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7592599-7592726:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7591393-7591507:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7588966-7589073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7588762-7588878:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7585132-7585296:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7581424-7581496:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7574477-7574617:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7573095-7573220:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7568954-7569066:-1:exon

Ppip5k2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ppip5k2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X6
translation: MSEPPRFFVGPEDAEINPGNYRRFFHHADEEEEEEEDSPPERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRRDVYSILQAEGILLPRYAVLNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSADIQLYHSETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCDESKDEQWKRAMDYLNIVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRSLRIDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKIATSEVVSENANYLRTPRTLVEQKQNPTVDATRGSAVKRFSISFARHPTNGFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEMTSMASRSSPGMRRKISLNTYTPTKILPTPPAVLKSTKASSKAAVGGPSLAMASHTSSRKKSLSSKTEGHEPKKSTGKKR
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7568954..7569066,7573095..7573220,7574477..7574617,7578179..7578241,7581424..7581496,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600312,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621129))
location: region:7568954-7621129:-1
so has part: feature:7621016-7621129:-1:exon
so has part: feature:7618772-7618967:-1:exon
so has part: feature:7616449-7616539:-1:exon
so has part: feature:7615487-7615572:-1:exon
so has part: feature:7614646-7614800:-1:exon
so has part: feature:7612483-7612584:-1:exon
so has part: feature:7610741-7610902:-1:exon
so has part: feature:7609701-7609822:-1:exon
so has part: feature:7608091-7608192:-1:exon
so has part: feature:7606954-7607040:-1:exon
so has part: feature:7605903-7605978:-1:exon
so has part: feature:7605665-7605774:-1:exon
so has part: feature:7604571-7604656:-1:exon
so has part: feature:7600428-7600553:-1:exon
so has part: feature:7600191-7600312:-1:exon
so has part: feature:7599818-7600000:-1:exon
so has part: feature:7594002-7594143:-1:exon
so has part: feature:7592956-7593179:-1:exon
so has part: feature:7592599-7592726:-1:exon
so has part: feature:7591393-7591507:-1:exon
so has part: feature:7588966-7589073:-1:exon
so has part: feature:7588762-7588878:-1:exon
so has part: feature:7585132-7585296:-1:exon
so has part: feature:7581424-7581496:-1:exon
so has part: feature:7578179-7578241:-1:exon
so has part: feature:7574477-7574617:-1:exon
so has part: feature:7573095-7573220:-1:exon
so has part: feature:7568954-7569066:-1:exon

XP_034377151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7621016-7621129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7618772-7618967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7616449-7616539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615487-7615572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614646-7614800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7612483-7612584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7610741-7610902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7609701-7609822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7608091-7608192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7606954-7607040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7605903-7605978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7605665-7605774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7604571-7604656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7600428-7600553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7600191-7600312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7599818-7600000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7594002-7594143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7592956-7593179:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7592599-7592726:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7591393-7591507:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7588966-7589073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7588762-7588878:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7585132-7585296:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7581424-7581496:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7578179-7578241:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7574477-7574617:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7573095-7573220:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7568954-7569066:-1:exon

Ppip5k2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ppip5k2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X5
translation: MSEPPRFFVGPEDAEINPGNYRRFFHHADEEEEEEEDSPPERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRRDVYSILQAEGILLPRYAVLNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSADIQLYHSETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCDESKDEQWKRAMDYLNIVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRSLRIDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKIATSEVVSENANYLRTPRTLVEQKQNPTVGSHCAGLFSTSVLGGSSSAPNLQDYARTHRKKLTSSGCIDGFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEMTSMASRSSPGMRRKISLNTYTPTKILPTPPAVLKSTKASSKAAVGGPSLAMASHTSSRKKSLSSKTEGHEPKKSTGKKR
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7568954..7569066,7573095..7573220,7574477..7574617,7579077..7579196,7581424..7581496,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600312,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621129))
location: region:7568954-7621129:-1
so has part: feature:7621016-7621129:-1:exon
so has part: feature:7618772-7618967:-1:exon
so has part: feature:7616449-7616539:-1:exon
so has part: feature:7615487-7615572:-1:exon
so has part: feature:7614646-7614800:-1:exon
so has part: feature:7612483-7612584:-1:exon
so has part: feature:7610741-7610902:-1:exon
so has part: feature:7609701-7609822:-1:exon
so has part: feature:7608091-7608192:-1:exon
so has part: feature:7606954-7607040:-1:exon
so has part: feature:7605903-7605978:-1:exon
so has part: feature:7605665-7605774:-1:exon
so has part: feature:7604571-7604656:-1:exon
so has part: feature:7600428-7600553:-1:exon
so has part: feature:7600191-7600312:-1:exon
so has part: feature:7599818-7600000:-1:exon
so has part: feature:7594002-7594143:-1:exon
so has part: feature:7592956-7593179:-1:exon
so has part: feature:7592599-7592726:-1:exon
so has part: feature:7591393-7591507:-1:exon
so has part: feature:7588966-7589073:-1:exon
so has part: feature:7588762-7588878:-1:exon
so has part: feature:7585132-7585296:-1:exon
so has part: feature:7581424-7581496:-1:exon
so has part: feature:7579077-7579196:-1:exon
so has part: feature:7574477-7574617:-1:exon
so has part: feature:7573095-7573220:-1:exon
so has part: feature:7568954-7569066:-1:exon

XP_034377149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7621016-7621129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7618772-7618967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7616449-7616539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615487-7615572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614646-7614800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7612483-7612584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7610741-7610902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7609701-7609822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7608091-7608192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7606954-7607040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7605903-7605978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7605665-7605774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7604571-7604656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7600428-7600553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7600191-7600312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7599818-7600000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7594002-7594143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7592956-7593179:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7592599-7592726:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7591393-7591507:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7588966-7589073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7588762-7588878:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7585132-7585296:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7581424-7581496:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7579077-7579196:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7574477-7574617:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7573095-7573220:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7568954-7569066:-1:exon

Ppip5k2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ppip5k2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X4
translation: MSEPPRFFVGPEDAEINPGNYRRFFHHADEEEEEEEDSPPERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRRDVYSILQAEGILLPRYAVLNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSADIQLYHSETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCDESKDEQWKRAMDYLNIVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRSLRIDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKIATSEVVSENANYLRTPRTLVEQKQNPTVGSHCAGLFSTSVLGGSSSAPNLQDYARTHRKKLTSSGCIDDATRGSAVKRFSISFARHPTNGFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEMTSMASRSSPGMRRKISLNTYTPTKILPTPPAVLKSTKASSKAAVGGPSLAMASHTSSRKKSLSSKTEGHEPKKSTGKKR
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7568954..7569066,7573095..7573220,7574477..7574617,7578179..7578241,7579077..7579196,7581424..7581496,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600312,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621129))
location: region:7568954-7621129:-1
so has part: feature:7621016-7621129:-1:exon
so has part: feature:7618772-7618967:-1:exon
so has part: feature:7616449-7616539:-1:exon
so has part: feature:7615487-7615572:-1:exon
so has part: feature:7614646-7614800:-1:exon
so has part: feature:7612483-7612584:-1:exon
so has part: feature:7610741-7610902:-1:exon
so has part: feature:7609701-7609822:-1:exon
so has part: feature:7608091-7608192:-1:exon
so has part: feature:7606954-7607040:-1:exon
so has part: feature:7605903-7605978:-1:exon
so has part: feature:7605665-7605774:-1:exon
so has part: feature:7604571-7604656:-1:exon
so has part: feature:7600428-7600553:-1:exon
so has part: feature:7600191-7600312:-1:exon
so has part: feature:7599818-7600000:-1:exon
so has part: feature:7594002-7594143:-1:exon
so has part: feature:7592956-7593179:-1:exon
so has part: feature:7592599-7592726:-1:exon
so has part: feature:7591393-7591507:-1:exon
so has part: feature:7588966-7589073:-1:exon
so has part: feature:7588762-7588878:-1:exon
so has part: feature:7585132-7585296:-1:exon
so has part: feature:7581424-7581496:-1:exon
so has part: feature:7579077-7579196:-1:exon
so has part: feature:7578179-7578241:-1:exon
so has part: feature:7574477-7574617:-1:exon
so has part: feature:7573095-7573220:-1:exon
so has part: feature:7568954-7569066:-1:exon

XP_034377148.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7621016-7621129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7618772-7618967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7616449-7616539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615487-7615572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614646-7614800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7612483-7612584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7610741-7610902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7609701-7609822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7608091-7608192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7606954-7607040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7605903-7605978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7605665-7605774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7604571-7604656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7600428-7600553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7600191-7600312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7599818-7600000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7594002-7594143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7592956-7593179:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7592599-7592726:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7591393-7591507:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7588966-7589073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7588762-7588878:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7585132-7585296:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7581424-7581496:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7579077-7579196:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7578179-7578241:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7574477-7574617:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7573095-7573220:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7568954-7569066:-1:exon

Ppip5k2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ppip5k2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X1
translation: MSEPPRFFVGPEDAEINPGNYRRFFHHADEEEEEEEDSPPERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCLISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRRDVYSILQAEGILLPRYAVLNRDPNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGSRSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDDCAKILGNIVMRELAPQFHIPWSIPLEAEDIPIVPTTSGTMMELRCVIAVIRHGDRTPKQKMKMEVRHQKFFDLFEKCDGYKSGKLKLKKPKQLQEVLDIARQLLMELGQNNDSEIEENKSKLEQLKTVLEMYGHFSGINRKVQLTYLPHGCPKTSSEEEDNRREEPSLLLVLKWGGELTPAGRVQAEELGRAFRCMYPGGQGDYAGFPGCGLLRLHSTYRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANMNGLLDSDSDSLSSCQQRVKARLHEILQKDRDFTAEDYEKLTPSGSISVIKSMHLIKNPVKTCDKVYSLIQSLTSQIRHRMEDPKSADIQLYHSETLELMLRRWSKLEKDFKTKNGRYDISKIPDIYDCIKYDVQHNGSLKLENTMELYRLSKALADIVIPQEYGITKAEKLEIAKGYCTPLVRKIRSDLQRTQDDDTVNKLHPVYSRGVLSPERHVRTRLYFTSESHVHSLLSILRYGALCDESKDEQWKRAMDYLNIVNELNYMTQIVIMLYEDPNKDLSSEERFHVELHFSPGAKGCEEDKNLPSGYGYRPASRENEGRRSLRIDDDEPHTSKRDEVDRAVMLFKPLVSEPIHIHRKSPLPRSRKIATSEEETPLSVSSPEGTGTWLHYTSGVGTGRRRRRSGEQITSSPVSPKSLAFTSSIFGSWQQVVSENANYLRTPRTLVEQKQNPTVGSHCAGLFSTSVLGGSSSAPNLQDYARTHRKKLTSSGCIDDATRGSAVKRFSISFARHPTNGFELYSMVPSICPLETLHNALFLKQVDDFLASIASPSTEVLRKVPEMTSMASRSSPGMRRKISLNTYTPTKILPTPPAVLKSTKASSKAAVGGPSLAMASHTSSRKKSLSSKTEGHEPKKSTGKKR
SIO_010081: Ppip5k2
subclass of: SO_0000673
so part of: Ppip5k2
location: complement(join(7568954..7569066,7573095..7573220,7574477..7574617,7578179..7578241,7579077..7579196,7581424..7581496,7582687..7582860,7585132..7585296,7588762..7588878,7588966..7589073,7591393..7591507,7592599..7592726,7592956..7593179,7594002..7594143,7599818..7600000,7600191..7600312,7600428..7600553,7604571..7604656,7605665..7605774,7605903..7605978,7606954..7607040,7608091..7608192,7609701..7609822,7610741..7610902,7612483..7612584,7614646..7614800,7615487..7615572,7616449..7616539,7618772..7618967,7621016..7621129))
location: region:7568954-7621129:-1
so has part: feature:7621016-7621129:-1:exon
so has part: feature:7618772-7618967:-1:exon
so has part: feature:7616449-7616539:-1:exon
so has part: feature:7615487-7615572:-1:exon
so has part: feature:7614646-7614800:-1:exon
so has part: feature:7612483-7612584:-1:exon
so has part: feature:7610741-7610902:-1:exon
so has part: feature:7609701-7609822:-1:exon
so has part: feature:7608091-7608192:-1:exon
so has part: feature:7606954-7607040:-1:exon
so has part: feature:7605903-7605978:-1:exon
so has part: feature:7605665-7605774:-1:exon
so has part: feature:7604571-7604656:-1:exon
so has part: feature:7600428-7600553:-1:exon
so has part: feature:7600191-7600312:-1:exon
so has part: feature:7599818-7600000:-1:exon
so has part: feature:7594002-7594143:-1:exon
so has part: feature:7592956-7593179:-1:exon
so has part: feature:7592599-7592726:-1:exon
so has part: feature:7591393-7591507:-1:exon
so has part: feature:7588966-7589073:-1:exon
so has part: feature:7588762-7588878:-1:exon
so has part: feature:7585132-7585296:-1:exon
so has part: feature:7582687-7582860:-1:exon
so has part: feature:7581424-7581496:-1:exon
so has part: feature:7579077-7579196:-1:exon
so has part: feature:7578179-7578241:-1:exon
so has part: feature:7574477-7574617:-1:exon
so has part: feature:7573095-7573220:-1:exon
so has part: feature:7568954-7569066:-1:exon

XP_034377145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7621016-7621129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7618772-7618967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7616449-7616539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615487-7615572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7614646-7614800:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7612483-7612584:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7610741-7610902:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7609701-7609822:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7608091-7608192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7606954-7607040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7605903-7605978:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7605665-7605774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7604571-7604656:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7600428-7600553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7600191-7600312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7599818-7600000:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7594002-7594143:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7592956-7593179:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7592599-7592726:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7591393-7591507:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7588966-7589073:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7588762-7588878:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7585132-7585296:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7582687-7582860:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7581424-7581496:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7579077-7579196:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7578179-7578241:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7574477-7574617:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7573095-7573220:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7568954-7569066:-1:exon

Gin1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Gin1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7628611..7649482
location: region:7628611-7649482:1
so has part: feature:7628611-7649482:1:exon
subclass of: SO_0000010

117722250
type: Gene
SIO_000068: ncbigene

position:7628611:1
position: 7628611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7649482:1
position: 7649482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7628611-7649482:1:exon

Gin1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Gin1
product: gypsy retrotransposon integrase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034521263.1
SIO_010081: Gin1
subclass of: SO_0000673
so part of: Gin1
location: join(7628611..7628693,7636391..7636536,7638245..7638438,7640534..7640839,7642454..7642645,7642754..7642921,7643714..7643996,7648931..7649482)
location: region:7628611-7649482:1
so has part: feature:7628611-7628693:1:exon
so has part: feature:7636391-7636536:1:exon
so has part: feature:7638245-7638438:1:exon
so has part: feature:7640534-7640839:1:exon
so has part: feature:7642454-7642645:1:exon
so has part: feature:7642754-7642921:1:exon
so has part: feature:7643714-7643996:1:exon
so has part: feature:7648931-7649482:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7628611-7628693:1:exon

position:7628693:1
position: 7628693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7636391-7636536:1:exon

position:7636391:1
position: 7636391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7636536:1
position: 7636536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7638245-7638438:1:exon

position:7638245:1
position: 7638245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7638438:1
position: 7638438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7640534-7640839:1:exon

position:7640534:1
position: 7640534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7640839:1
position: 7640839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7642454-7642645:1:exon

position:7642454:1
position: 7642454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7642645:1
position: 7642645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7642754-7642921:1:exon

position:7642754:1
position: 7642754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7642921:1
position: 7642921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7643714-7643996:1:exon

position:7643714:1
position: 7643714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7643996:1
position: 7643996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7648931-7649482:1:exon

position:7648931:1
position: 7648931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gin1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Gin1
product: gypsy retrotransposon integrase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034521264.1
SIO_010081: Gin1
subclass of: SO_0000673
so part of: Gin1
location: join(7628630..7628693,7629959..7630173,7636391..7636536,7638245..7638438,7640534..7640839,7642454..7642645,7642754..7642921,7643714..7643996,7648931..7649397)
location: region:7628630-7649397:1
so has part: feature:7628630-7628693:1:exon
so has part: feature:7629959-7630173:1:exon
so has part: feature:7636391-7636536:1:exon
so has part: feature:7638245-7638438:1:exon
so has part: feature:7640534-7640839:1:exon
so has part: feature:7642454-7642645:1:exon
so has part: feature:7642754-7642921:1:exon
so has part: feature:7643714-7643996:1:exon
so has part: feature:7648931-7649397:1:exon

position:7628630:1
position: 7628630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7649397:1
position: 7649397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7628630-7628693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7629959-7630173:1:exon

position:7629959:1
position: 7629959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7630173:1
position: 7630173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7636391-7636536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7638245-7638438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7640534-7640839:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7642454-7642645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7642754-7642921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7643714-7643996:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7648931-7649397:1:exon

Gin1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Gin1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gypsy retrotransposon integrase-like protein 1 isoform X1
translation: MVRSGKNGDLHLKQIAYYKRTGEYHPTTLSSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVVVSEEEKKKVLRECHENGPGVHHGISRTLTLVESGYYWTSVTNDVKQWVYACQHCQVAKNTVIVAPQQHLPMVGNPWSVVTVDLMGPFHTSNRSHVYAIIMTDLFTKWVMILPLCDVSASEISKAIINIFFLYGPPQKIIMDQRDEFIEQINVELYRLFGAKEIVISRASGSVNPAESTPSTMKTFLSKHCAEHPNNWDEHLPALSFAFNVTHSEPTKNTPYFQMFNRNPYMSECPPEDGGEGPSVFARIVAAVREADGVLGSKTPAAGQMENSNSDELNKSKVVKKKAKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDNTGTRLKRPIKMSHLRPYVRESSEQDSLYLLQGSIVADHDYIGLPEIPVGTYQANILVEDATIGIADNELLITSKDHELLEYRNSKISALVEDHNSLEKQTFSLLDSSNQVLEYLS
SIO_010081: Gin1
subclass of: SO_0000673
so part of: Gin1
location: join(7636398..7636536,7638245..7638438,7640534..7640839,7642454..7642645,7642754..7642921,7643714..7643996,7648931..7649205)
location: region:7636398-7649205:1
so has part: feature:7636398-7636536:1:exon
so has part: feature:7638245-7638438:1:exon
so has part: feature:7640534-7640839:1:exon
so has part: feature:7642454-7642645:1:exon
so has part: feature:7642754-7642921:1:exon
so has part: feature:7643714-7643996:1:exon
so has part: feature:7648931-7649205:1:exon

XP_034377154.1
type: Protein
SIO_000068: ncbiprotein

position:7636398:1
position: 7636398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7649205:1
position: 7649205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7636398-7636536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7638245-7638438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7640534-7640839:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7642454-7642645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7642754-7642921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7643714-7643996:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7648931-7649205:1:exon

Gin1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Gin1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gypsy retrotransposon integrase-like protein 1 isoform X1
translation: MVRSGKNGDLHLKQIAYYKRTGEYHPTTLSSERSGIRRAAKKFVFKEKKLFYVGKDRKQNRLVVVSEEEKKKVLRECHENGPGVHHGISRTLTLVESGYYWTSVTNDVKQWVYACQHCQVAKNTVIVAPQQHLPMVGNPWSVVTVDLMGPFHTSNRSHVYAIIMTDLFTKWVMILPLCDVSASEISKAIINIFFLYGPPQKIIMDQRDEFIEQINVELYRLFGAKEIVISRASGSVNPAESTPSTMKTFLSKHCAEHPNNWDEHLPALSFAFNVTHSEPTKNTPYFQMFNRNPYMSECPPEDGGEGPSVFARIVAAVREADGVLGSKTPAAGQMENSNSDELNKSKVVKKKAKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDNTGTRLKRPIKMSHLRPYVRESSEQDSLYLLQGSIVADHDYIGLPEIPVGTYQANILVEDATIGIADNELLITSKDHELLEYRNSKISALVEDHNSLEKQTFSLLDSSNQVLEYLS
SIO_010081: Gin1
subclass of: SO_0000673
so part of: Gin1
location: join(7636398..7636536,7638245..7638438,7640534..7640839,7642454..7642645,7642754..7642921,7643714..7643996,7648931..7649205)
location: region:7636398-7649205:1
so has part: feature:7636398-7636536:1:exon
so has part: feature:7638245-7638438:1:exon
so has part: feature:7640534-7640839:1:exon
so has part: feature:7642454-7642645:1:exon
so has part: feature:7642754-7642921:1:exon
so has part: feature:7643714-7643996:1:exon
so has part: feature:7648931-7649205:1:exon

XP_034377155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7636398-7636536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7638245-7638438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7640534-7640839:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7642454-7642645:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7642754-7642921:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7643714-7643996:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7648931-7649205:1:exon

Gin1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Gin1
product: gypsy retrotransposon integrase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521265.1
SIO_010081: Gin1
subclass of: SO_0000673
so part of: Gin1
location: join(7638392..7638494,7640534..7640839,7642454..7642645,7642754..7642921,7643714..7643996,7648931..7649397)
location: region:7638392-7649397:1
so has part: feature:7638392-7638494:1:exon
so has part: feature:7640534-7640839:1:exon
so has part: feature:7642454-7642645:1:exon
so has part: feature:7642754-7642921:1:exon
so has part: feature:7643714-7643996:1:exon
so has part: feature:7648931-7649397:1:exon

position:7638392:1
position: 7638392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7638392-7638494:1:exon

position:7638494:1
position: 7638494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7640534-7640839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7642454-7642645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7642754-7642921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7643714-7643996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7648931-7649397:1:exon

Gin1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Gin1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gypsy retrotransposon integrase-like protein 1 isoform X2
translation: MASTQCLGMFYYLSDKLEVYACQHCQVAKNTVIVAPQQHLPMVGNPWSVVTVDLMGPFHTSNRSHVYAIIMTDLFTKWVMILPLCDVSASEISKAIINIFFLYGPPQKIIMDQRDEFIEQINVELYRLFGAKEIVISRASGSVNPAESTPSTMKTFLSKHCAEHPNNWDEHLPALSFAFNVTHSEPTKNTPYFQMFNRNPYMSECPPEDGGEGPSVFARIVAAVREADGVLGSKTPAAGQMENSNSDELNKSKVVKKKAKQLNPFHLKVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITESGCAVLRDNTGTRLKRPIKMSHLRPYVRESSEQDSLYLLQGSIVADHDYIGLPEIPVGTYQANILVEDATIGIADNELLITSKDHELLEYRNSKISALVEDHNSLEKQTFSLLDSSNQVLEYLS
SIO_010081: Gin1
subclass of: SO_0000673
so part of: Gin1
location: join(7638441..7638494,7640534..7640839,7642454..7642645,7642754..7642921,7643714..7643996,7648931..7649205)
location: region:7638441-7649205:1
so has part: feature:7638441-7638494:1:exon
so has part: feature:7640534-7640839:1:exon
so has part: feature:7642454-7642645:1:exon
so has part: feature:7642754-7642921:1:exon
so has part: feature:7643714-7643996:1:exon
so has part: feature:7648931-7649205:1:exon

XP_034377156.1
type: Protein
SIO_000068: ncbiprotein

position:7638441:1
position: 7638441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7638441-7638494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7640534-7640839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7642454-7642645:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7642754-7642921:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7643714-7643996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7648931-7649205:1:exon

Pam
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7681346..7963241)
location: region:7681346-7963241:-1
so has part: feature:7681346-7963241:-1:exon
subclass of: SO_0000010

117722233
type: Gene
SIO_000068: ncbigene

position:7681346:-1
position: 7681346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7963241:-1
position: 7963241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7681346-7963241:-1:exon

Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521200.1
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7681346..7682186,7682851..7682904,7685741..7685944,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7729171..7729488,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843685,7963070..7963241))
location: region:7681346-7963241:-1
so has part: feature:7963070-7963241:-1:exon
so has part: feature:7843281-7843685:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7729171-7729488:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7685741-7685944:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7681346-7682186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7963070-7963241:-1:exon

position:7963070:-1
position: 7963070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7843281-7843685:-1:exon

position:7843281:-1
position: 7843281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7843685:-1
position: 7843685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7842214-7842334:-1:exon

position:7842214:-1
position: 7842214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7842334:-1
position: 7842334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7806553-7806610:-1:exon

position:7806553:-1
position: 7806553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7806610:-1
position: 7806610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7796614-7796701:-1:exon

position:7796614:-1
position: 7796614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7796701:-1
position: 7796701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7786121-7786206:-1:exon

position:7786121:-1
position: 7786121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7786206:-1
position: 7786206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7784777-7784860:-1:exon

position:7784777:-1
position: 7784777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7784860:-1
position: 7784860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7757166-7757214:-1:exon

position:7757166:-1
position: 7757166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7757214:-1
position: 7757214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7755779-7755846:-1:exon

position:7755779:-1
position: 7755779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7755846:-1
position: 7755846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7754549-7754629:-1:exon

position:7754549:-1
position: 7754549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7754629:-1
position: 7754629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7754203-7754279:-1:exon

position:7754203:-1
position: 7754203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7754279:-1
position: 7754279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7752918-7753021:-1:exon

position:7752918:-1
position: 7752918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7753021:-1
position: 7753021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7743849-7744033:-1:exon

position:7743849:-1
position: 7743849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7744033:-1
position: 7744033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7742378-7742449:-1:exon

position:7742378:-1
position: 7742378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7742449:-1
position: 7742449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7729171-7729488:-1:exon

position:7729171:-1
position: 7729171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7729488:-1
position: 7729488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7718217-7718346:-1:exon

position:7718217:-1
position: 7718217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7718346:-1
position: 7718346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7708026-7708142:-1:exon

position:7708026:-1
position: 7708026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7708142:-1
position: 7708142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7705657-7705729:-1:exon

position:7705657:-1
position: 7705657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7705729:-1
position: 7705729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7703929-7704139:-1:exon

position:7703929:-1
position: 7703929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7704139:-1
position: 7704139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7703510-7703710:-1:exon

position:7703510:-1
position: 7703510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7703710:-1
position: 7703710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7700683-7700798:-1:exon

position:7700683:-1
position: 7700683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7700798:-1
position: 7700798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7697087-7697186:-1:exon

position:7697087:-1
position: 7697087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7697186:-1
position: 7697186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7691283-7691336:-1:exon

position:7691283:-1
position: 7691283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7691336:-1
position: 7691336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7685741-7685944:-1:exon

position:7685741:-1
position: 7685741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7685944:-1
position: 7685944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7682851-7682904:-1:exon

position:7682851:-1
position: 7682851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7682904:-1
position: 7682904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7681346-7682186:-1:exon

position:7682186:-1
position: 7682186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521205.1
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7681346..7682186,7682851..7682904,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7729171..7729488,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843685,7963070..7963231))
location: region:7681346-7963231:-1
so has part: feature:7963070-7963231:-1:exon
so has part: feature:7843281-7843685:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7729171-7729488:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7681346-7682186:-1:exon

position:7963231:-1
position: 7963231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7963070-7963231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7843281-7843685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7729171-7729488:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7682851-7682904:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7681346-7682186:-1:exon

Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521207.1
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7681346..7682186,7682851..7682904,7685741..7685944,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843685,7963070..7963201))
location: region:7681346-7963201:-1
so has part: feature:7963070-7963201:-1:exon
so has part: feature:7843281-7843685:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7685741-7685944:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7681346-7682186:-1:exon

position:7963201:-1
position: 7963201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7963070-7963201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7843281-7843685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
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Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521206.1
SIO_010081: Pam
subclass of: SO_0000673
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Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521202.1
SIO_010081: Pam
subclass of: SO_0000673
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Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521203.1
SIO_010081: Pam
subclass of: SO_0000673
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Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521208.1
SIO_010081: Pam
subclass of: SO_0000673
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Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521211.1
SIO_010081: Pam
subclass of: SO_0000673
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position:7963183:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521210.1
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7681346..7682186,7682851..7682904,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843685,7963070..7963183))
location: region:7681346-7963183:-1
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Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521209.1
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7681346..7682186,7685741..7685944,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843685,7963070..7963183))
location: region:7681346-7963183:-1
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Pam
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pam
product: peptidylglycine alpha-amidating monooxygenase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521201.1
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7681346..7682186,7682851..7682904,7685741..7685944,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7729171..7729488,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843685,7843966..7844033))
location: region:7681346-7844033:-1
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position:7844033:-1
position: 7844033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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position:7843966:-1
position: 7843966
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type: ReverseStrandPosition
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urn:…
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Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X10
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
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XP_034377102.1
type: Protein
SIO_000068: ncbiprotein

position:7682008:-1
position: 7682008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7843384:-1
position: 7843384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X9
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKDHDRKLESSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7682851..7682904,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7682851-7682904:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X7
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKAEAVVEPKVENKPTSSELQKMQEKEKLIKEPGSGVSVVLITTLLVIPVVVLLAIAMFIRWKKSRAFGDHDRKLESSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7682851..7682904,7685741..7685941,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7685741-7685941:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377099.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7685741-7685941:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7682851-7682904:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X8
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKEAEAVVEPKVENKPTSSELQKMQEKEKLIKEPGSGVSVVLITTLLVIPVVVLLAIAMFIRWKKSRAFGGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7685741..7685944,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7685741-7685944:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377100.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7685741-7685944:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X6
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKEAEAVVEPKVENKPTSSELQKMQEKEKLIKEPGSGVSVVLITTLLVIPVVVLLAIAMFIRWKKSRAFGDHDRKLESSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7682851..7682904,7685741..7685944,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7685741-7685944:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377098.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7685741-7685944:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7682851-7682904:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X5
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQGDFYSLLSKLLGEREDVVHVHKYNPTEKTESGSDLVAEIANVVQKKDLGRSDAREGLEHEEGGNAVLVRDRIHKFHRLESTLRPAESRAFSFQQPGEGPWESEPSGDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7729171..7729488,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7729171-7729488:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7729171-7729488:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X4
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQGDFYSLLSKLLGEREDVVHVHKYNPTEKTESGSDLVAEIANVVQKKDLGRSDAREGLEHEEGGNAVLVRDRIHKFHRLESTLRPAESRAFSFQQPGEGPWESEPSGDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKDHDRKLESSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7682851..7682904,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7729171..7729488,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7729171-7729488:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7729171-7729488:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7682851-7682904:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X2
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQGDFYSLLSKLLGEREDVVHVHKYNPTEKTESGSDLVAEIANVVQKKDLGRSDAREGLEHEEGGNAVLVRDRIHKFHRLESTLRPAESRAFSFQQPGEGPWESEPSGDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKAEAVVEPKVENKPTSSELQKMQEKEKLIKEPGSGVSVVLITTLLVIPVVVLLAIAMFIRWKKSRAFGDHDRKLESSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7682851..7682904,7685741..7685941,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7729171..7729488,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7729171-7729488:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7685741-7685941:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7729171-7729488:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7685741-7685941:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7682851-7682904:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X3
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQGDFYSLLSKLLGEREDVVHVHKYNPTEKTESGSDLVAEIANVVQKKDLGRSDAREGLEHEEGGNAVLVRDRIHKFHRLESTLRPAESRAFSFQQPGEGPWESEPSGDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKEAEAVVEPKVENKPTSSELQKMQEKEKLIKEPGSGVSVVLITTLLVIPVVVLLAIAMFIRWKKSRAFGGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7685741..7685944,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7729171..7729488,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7729171-7729488:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7685741-7685944:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7729171-7729488:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7685741-7685944:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X1
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQGDFYSLLSKLLGEREDVVHVHKYNPTEKTESGSDLVAEIANVVQKKDLGRSDAREGLEHEEGGNAVLVRDRIHKFHRLESTLRPAESRAFSFQQPGEGPWESEPSGDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKEAEAVVEPKVENKPTSSELQKMQEKEKLIKEPGSGVSVVLITTLLVIPVVVLLAIAMFIRWKKSRAFGDHDRKLESSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7682851..7682904,7685741..7685944,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7729171..7729488,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7729171-7729488:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7685741-7685944:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7729171-7729488:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7685741-7685944:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7682851-7682904:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7682008-7682186:-1:exon

Pam
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pam
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-glycine alpha-amidating monooxygenase isoform X1
translation: MARRARSRLLLLLLGLFALQSSCLAFRSPLSVFKRFKETTRSFSNECLGTSRPVSPIDSSDFALDIRMPGVTPKESDTYFCMSMRLPVDEEAFVIDFKPRASMDTVHHMLLFGCNMPSSTGSYWFCDEGTCTDKANILYAWARNAPPTRLPKGVGFRVGGETGSKYFVLQVHYGDISAFRDNHKDCSGVSLHLTRVPQPLIAGMYLMMSVDTVIPPGEKVVNSDISCHYKMYPMHVFAYRVHTHRLGKVVSGYRVRNGQWAVIGRQSPQLPQAFYPVEHPVDVTFGDVLAARCVFTGEGRTEATHIGGTSSDEMCNLYIMYYMEAKHAVSFMTCTHNVAPDMFRTIPAEANIPIPVKPDMVMMHGHHKETENKEKGALIQQPKRGEEEVLEQGDFYSLLSKLLGEREDVVHVHKYNPTEKTESGSDLVAEIANVVQKKDLGRSDAREGLEHEEGGNAVLVRDRIHKFHRLESTLRPAESRAFSFQQPGEGPWESEPSGDFHVEEALDWPGVYLLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDANNAEVIQSSGKSLFYLPHGLSIDMDGNYWVTDVALHQVFKLDPHSKEGPLLVLGRSMQPGSDQNHFCQPTDVAVEPRTGAVFVSDGYCNSRIVQFSPSGKFITQWGEESSGGSPKPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFVVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVATEDGTVYIGDAHTNTVWKFTLTEKTEHRSVKKAGIEVQEIKEAEAVVEPKVENKPTSSELQKMQEKEKLIKEPGSGVSVVLITTLLVIPVVVLLAIAMFIRWKKSRAFGDHDRKLESSSGRVLGRFRGKGSGGLNLGNFFASRKGYSRKGFDRVSTEGSDQEKDEDDGSESEEEYSAPLPTPAPSS
SIO_010081: Pam
subclass of: SO_0000673
so part of: Pam
location: complement(join(7682008..7682186,7682851..7682904,7685741..7685944,7691283..7691336,7697087..7697186,7700683..7700798,7703510..7703710,7703929..7704139,7705657..7705729,7708026..7708142,7718217..7718346,7729171..7729488,7742378..7742449,7743849..7744033,7752918..7753021,7754203..7754279,7754549..7754629,7755779..7755846,7757166..7757214,7784777..7784860,7786121..7786206,7796614..7796701,7806553..7806610,7842214..7842334,7843281..7843384))
location: region:7682008-7843384:-1
so has part: feature:7843281-7843384:-1:exon
so has part: feature:7842214-7842334:-1:exon
so has part: feature:7806553-7806610:-1:exon
so has part: feature:7796614-7796701:-1:exon
so has part: feature:7786121-7786206:-1:exon
so has part: feature:7784777-7784860:-1:exon
so has part: feature:7757166-7757214:-1:exon
so has part: feature:7755779-7755846:-1:exon
so has part: feature:7754549-7754629:-1:exon
so has part: feature:7754203-7754279:-1:exon
so has part: feature:7752918-7753021:-1:exon
so has part: feature:7743849-7744033:-1:exon
so has part: feature:7742378-7742449:-1:exon
so has part: feature:7729171-7729488:-1:exon
so has part: feature:7718217-7718346:-1:exon
so has part: feature:7708026-7708142:-1:exon
so has part: feature:7705657-7705729:-1:exon
so has part: feature:7703929-7704139:-1:exon
so has part: feature:7703510-7703710:-1:exon
so has part: feature:7700683-7700798:-1:exon
so has part: feature:7697087-7697186:-1:exon
so has part: feature:7691283-7691336:-1:exon
so has part: feature:7685741-7685944:-1:exon
so has part: feature:7682851-7682904:-1:exon
so has part: feature:7682008-7682186:-1:exon

XP_034377092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7843281-7843384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7842214-7842334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7806553-7806610:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7796614-7796701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7786121-7786206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7784777-7784860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7757166-7757214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7755779-7755846:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7754549-7754629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7754203-7754279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7752918-7753021:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7743849-7744033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7742378-7742449:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7729171-7729488:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7718217-7718346:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7708026-7708142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7705657-7705729:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7703929-7704139:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7703510-7703710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7700683-7700798:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7697087-7697186:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7691283-7691336:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7685741-7685944:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7682851-7682904:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7682008-7682186:-1:exon

LOC117722638
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8227624..8314634
location: region:8227624-8314634:1
so has part: feature:8227624-8314634:1:exon
subclass of: SO_0000010

117722638
type: Gene
SIO_000068: ncbigene

position:8227624:1
position: 8227624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8314634:1
position: 8314634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8227624-8314634:1:exon

LOC117722638
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117722638
product: solute carrier organic anion transporter family member 6A1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 5 Proteins
transcript id: XM_034521888.1
SIO_010081: LOC117722638
subclass of: SO_0000673
so part of: LOC117722638
location: join(8227624..8228072,8231192..8231452,8240439..8240627,8243720..8243810,8258141..8258259,8260924..8261030,8274975..8275119,8282340..8282535,8287508..8287661,8292636..8292823,8301146..8301210,8303009..8303146,8312839..8312982,8314479..8314634)
location: region:8227624-8314634:1
so has part: feature:8227624-8228072:1:exon
so has part: feature:8231192-8231452:1:exon
so has part: feature:8240439-8240627:1:exon
so has part: feature:8243720-8243810:1:exon
so has part: feature:8258141-8258259:1:exon
so has part: feature:8260924-8261030:1:exon
so has part: feature:8274975-8275119:1:exon
so has part: feature:8282340-8282535:1:exon
so has part: feature:8287508-8287661:1:exon
so has part: feature:8292636-8292823:1:exon
so has part: feature:8301146-8301210:1:exon
so has part: feature:8303009-8303146:1:exon
so has part: feature:8312839-8312982:1:exon
so has part: feature:8314479-8314634:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8227624-8228072:1:exon

position:8228072:1
position: 8228072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8231192-8231452:1:exon

position:8231192:1
position: 8231192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8231452:1
position: 8231452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8240439-8240627:1:exon

position:8240439:1
position: 8240439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8240627:1
position: 8240627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8243720-8243810:1:exon

position:8243720:1
position: 8243720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8243810:1
position: 8243810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8258141-8258259:1:exon

position:8258141:1
position: 8258141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8258259:1
position: 8258259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8260924-8261030:1:exon

position:8260924:1
position: 8260924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8261030:1
position: 8261030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8274975-8275119:1:exon

position:8274975:1
position: 8274975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8275119:1
position: 8275119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8282340-8282535:1:exon

position:8282340:1
position: 8282340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8282535:1
position: 8282535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8287508-8287661:1:exon

position:8287508:1
position: 8287508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8287661:1
position: 8287661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8292636-8292823:1:exon

position:8292636:1
position: 8292636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8292823:1
position: 8292823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8301146-8301210:1:exon

position:8301146:1
position: 8301146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8301210:1
position: 8301210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8303009-8303146:1:exon

position:8303009:1
position: 8303009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8303146:1
position: 8303146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8312839-8312982:1:exon

position:8312839:1
position: 8312839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8312982:1
position: 8312982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8314479-8314634:1:exon

position:8314479:1
position: 8314479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117722638
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: LOC117722638
product: solute carrier organic anion transporter family member 6A1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
transcript id: XR_004608560.1
SIO_010081: LOC117722638
so part of: LOC117722638
location: join(8227689..8228072,8231192..8231452,8240439..8240627,8243720..8243810,8258141..8258259,8260924..8261030,8274975..8275119,8282340..8282535,8287508..8287661,8292636..8292823,8297743..8297845,8301146..8301210,8303009..8303146,8312839..8312982,8314081..8314179,8314479..8314624)
location: region:8227689-8314624:1
so has part: feature:8227689-8228072:1:exon
so has part: feature:8231192-8231452:1:exon
so has part: feature:8240439-8240627:1:exon
so has part: feature:8243720-8243810:1:exon
so has part: feature:8258141-8258259:1:exon
so has part: feature:8260924-8261030:1:exon
so has part: feature:8274975-8275119:1:exon
so has part: feature:8282340-8282535:1:exon
so has part: feature:8287508-8287661:1:exon
so has part: feature:8292636-8292823:1:exon
so has part: feature:8297743-8297845:1:exon
so has part: feature:8301146-8301210:1:exon
so has part: feature:8303009-8303146:1:exon
so has part: feature:8312839-8312982:1:exon
so has part: feature:8314081-8314179:1:exon
so has part: feature:8314479-8314624:1:exon

position:8227689:1
position: 8227689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8314624:1
position: 8314624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8227689-8228072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8231192-8231452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8240439-8240627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8243720-8243810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8258141-8258259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8260924-8261030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8274975-8275119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8282340-8282535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8287508-8287661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8292636-8292823:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8297743-8297845:1:exon

position:8297743:1
position: 8297743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8297845:1
position: 8297845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8301146-8301210:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8303009-8303146:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8312839-8312982:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8314081-8314179:1:exon

position:8314081:1
position: 8314081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8314179:1
position: 8314179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8314479-8314624:1:exon

LOC117722638
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117722638
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier organic anion transporter family member 6A1-like
translation: MAQDERKTSDKVEEALVVNKNEHQSSEEHMKIETYLVTLPTAMKKFANIPDRKKLHPEYKDSSERPFGLGPLIFPCLQRFNNIKTFLFLLFVAVFAHGMLFALVDVTIVVYASHFSTSNSETFIMNFSDYFAAFLVAMFVGYFGGRGNRAKWAAAGSFVTGLAAIVFAVPIYNYEIITLSQVKEELCKEGKMTTKVCEETLIQNKSICIFLFIFGQFLHGIAGMPMYILATTFIFDHVPTNSSGLYLAIADAALIVGYTLGFTAAKKKLPIQEAMQAVGHVQRFRILQRHWWKSFFIAAVIAFSTTLPLLCFPSSLPGAHKLRLKRRGPPTIDTRLKNKKIKPNLKSILHAVWCLLRNPLVLTQTFCKVTEVLTFKASSHFLPRYLQTRFLMAPSRASKFSGALVLSGSGIGHFVGGYIVDRLEMDNKSKLKLIAISAVVSAVLFLLTFFVECETAKFQGINDDYDSSGRLGNLTAPCNENCGCTTSVYNSVCGRDENQYFSPCFAGCRATKSLKEKKAYYNCSCINEGLITVDQEGQEIDAVSGTCDTKCHTIPLFFAFYFSATVFSHLSSIPVILIIIQSVPASWNSMALGFTYTVWRFTGAVPGPLLFAATSDFTCKFWDINECGNKVRCWIFDKQNLVYTFQIIWIGLQGLAGFLCFYALSRYDYVVNEKTEELPTPVNVKRTEEF
SIO_010081: LOC117722638
subclass of: SO_0000673
so part of: LOC117722638
location: join(8227781..8228072,8231192..8231452,8240439..8240627,8243720..8243810,8258141..8258259,8260924..8261030,8274975..8275119,8282340..8282535,8287508..8287661,8292636..8292823,8301146..8301210,8303009..8303146,8312839..8312966)
location: region:8227781-8312966:1
so has part: feature:8227781-8228072:1:exon
so has part: feature:8231192-8231452:1:exon
so has part: feature:8240439-8240627:1:exon
so has part: feature:8243720-8243810:1:exon
so has part: feature:8258141-8258259:1:exon
so has part: feature:8260924-8261030:1:exon
so has part: feature:8274975-8275119:1:exon
so has part: feature:8282340-8282535:1:exon
so has part: feature:8287508-8287661:1:exon
so has part: feature:8292636-8292823:1:exon
so has part: feature:8301146-8301210:1:exon
so has part: feature:8303009-8303146:1:exon
so has part: feature:8312839-8312966:1:exon

XP_034377779.1
type: Protein
SIO_000068: ncbiprotein

position:8227781:1
position: 8227781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8312966:1
position: 8312966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8227781-8228072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8231192-8231452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8240439-8240627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8243720-8243810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8258141-8258259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8260924-8261030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8274975-8275119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8282340-8282535:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8287508-8287661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8292636-8292823:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8301146-8301210:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8303009-8303146:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8312839-8312966:1:exon

LOC117722713
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8347103..8474095)
location: region:8347103-8474095:-1
so has part: feature:8347103-8474095:-1:exon
subclass of: SO_0000010

117722713
type: Gene
SIO_000068: ncbigene

position:8347103:-1
position: 8347103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8474095:-1
position: 8474095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8347103-8474095:-1:exon

LOC117722713
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117722713
product: solute carrier organic anion transporter family member 6A1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_034521973.1
SIO_010081: LOC117722713
subclass of: SO_0000673
so part of: LOC117722713
location: complement(join(8347103..8347263,8353254..8353391,8355771..8355835,8369904..8370091,8381999..8382152,8389714..8389909,8428295..8428439,8446290..8446399,8449324..8449439,8461802..8461898,8466664..8466852,8471972..8472232,8473804..8474095))
location: region:8347103-8474095:-1
so has part: feature:8473804-8474095:-1:exon
so has part: feature:8471972-8472232:-1:exon
so has part: feature:8466664-8466852:-1:exon
so has part: feature:8461802-8461898:-1:exon
so has part: feature:8449324-8449439:-1:exon
so has part: feature:8446290-8446399:-1:exon
so has part: feature:8428295-8428439:-1:exon
so has part: feature:8389714-8389909:-1:exon
so has part: feature:8381999-8382152:-1:exon
so has part: feature:8369904-8370091:-1:exon
so has part: feature:8355771-8355835:-1:exon
so has part: feature:8353254-8353391:-1:exon
so has part: feature:8347103-8347263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8473804-8474095:-1:exon

position:8473804:-1
position: 8473804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8471972-8472232:-1:exon

position:8471972:-1
position: 8471972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8472232:-1
position: 8472232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8466664-8466852:-1:exon

position:8466664:-1
position: 8466664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8466852:-1
position: 8466852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8461802-8461898:-1:exon

position:8461802:-1
position: 8461802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8461898:-1
position: 8461898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8449324-8449439:-1:exon

position:8449324:-1
position: 8449324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8449439:-1
position: 8449439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8446290-8446399:-1:exon

position:8446290:-1
position: 8446290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8446399:-1
position: 8446399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8428295-8428439:-1:exon

position:8428295:-1
position: 8428295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8428439:-1
position: 8428439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8389714-8389909:-1:exon

position:8389714:-1
position: 8389714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8389909:-1
position: 8389909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8381999-8382152:-1:exon

position:8381999:-1
position: 8381999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8382152:-1
position: 8382152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8369904-8370091:-1:exon

position:8369904:-1
position: 8369904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8370091:-1
position: 8370091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8355771-8355835:-1:exon

position:8355771:-1
position: 8355771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8355835:-1
position: 8355835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8353254-8353391:-1:exon

position:8353254:-1
position: 8353254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8353391:-1
position: 8353391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8347103-8347263:-1:exon

position:8347263:-1
position: 8347263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117722713
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117722713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier organic anion transporter family member 6A1-like
translation: MAPDKRKQKDTVKQGTLANKDEHQRTEEPRKIETYLVTLPTALKKFADIPDTKKLDPDYNDSSEGPFGLGPLVFPCLQRFNNIEAFMFLFCVAVFTHGMMFALIDLTLKVFATYFSASNTEIFLMDFADYFAAFLVATFVGYFGGRGNKAKWVAAATFVTGLSAIVYAAIFLNYEVIKMSTIKTEDLCEEGKKPKPCGVTIIPHKSICLILFIFGQFLHGIAGMPLYILATTFIFDHVPTFSSGLYLAISDAAVMIGYLLGFLLGVKSFMLPVKEVIKSVGRTQFQTLQSHWWTTFIFVALASFCTSLPLLCFPSSLPGAHKLRLQKAKEPPTIDKRLKNMKIGNNLKSILYAIWCLLRNPLVLTQTFCKVTESVTFKASFHFMPLYLQTQFLITPKHSTMITGLFILPGCIIGHFAGGYIIDKLQMSNKNKLKFISVVSVVAVALFLLTISVACETAKFQGINDDYDGLGRLGNLTAPCNEKCGCTTSTYNSVCGRDENQYFSPCFAGCRATKSTKEGKTHYNCSCIKEGLTAPDDDGQYIDAVSGTCNTKCLSLPLFFAFYFSSTVFSNFASIPSTIIIIGSVPASWRSMALGVTYTIWRFIGAFPVPIIFPELAALACNFWDINECGIKVRCWIYKEKLLDHIFLGIWFSLQVATGLLCLYAVYRHDYVVKETTKNLDVPVKRKKAGKGGIDKVGGEEEI
SIO_010081: LOC117722713
subclass of: SO_0000673
so part of: LOC117722713
location: complement(join(8347103..8347263,8353254..8353391,8355771..8355835,8369904..8370091,8381999..8382152,8389714..8389909,8428295..8428439,8446290..8446399,8449324..8449439,8461802..8461898,8466664..8466852,8471972..8472232,8473804..8474095))
location: region:8347103-8474095:-1
so has part: feature:8473804-8474095:-1:exon
so has part: feature:8471972-8472232:-1:exon
so has part: feature:8466664-8466852:-1:exon
so has part: feature:8461802-8461898:-1:exon
so has part: feature:8449324-8449439:-1:exon
so has part: feature:8446290-8446399:-1:exon
so has part: feature:8428295-8428439:-1:exon
so has part: feature:8389714-8389909:-1:exon
so has part: feature:8381999-8382152:-1:exon
so has part: feature:8369904-8370091:-1:exon
so has part: feature:8355771-8355835:-1:exon
so has part: feature:8353254-8353391:-1:exon
so has part: feature:8347103-8347263:-1:exon

XP_034377864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8473804-8474095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8471972-8472232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8466664-8466852:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8461802-8461898:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8449324-8449439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8446290-8446399:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8428295-8428439:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8389714-8389909:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8381999-8382152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8369904-8370091:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8355771-8355835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8353254-8353391:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8347103-8347263:-1:exon

LOC117722714
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722714
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8657781..8658921
location: region:8657781-8658921:1
so has part: feature:8657781-8658921:1:exon

117722714
type: Gene
SIO_000068: ncbigene

position:8657781:1
position: 8657781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8658921:1
position: 8658921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8657781-8658921:1:exon

LOC117722714
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722714
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117722714
subclass of: SO_0000673
so part of: LOC117722714
location: 8657781..8658921
location: region:8657781-8658921:1
so has part: feature:8657781-8658921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8657781-8658921:1:exon

Slco6a1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slco6a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8664549..8736980
location: region:8664549-8736980:1
so has part: feature:8664549-8736980:1:exon
subclass of: SO_0000010

117722657
type: Gene
SIO_000068: ncbigene

position:8664549:1
position: 8664549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8736980:1
position: 8736980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8664549-8736980:1:exon

Slco6a1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slco6a1
product: solute carrier organic anion transporter family member 6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins
transcript id: XM_034521911.1
SIO_010081: Slco6a1
subclass of: SO_0000673
so part of: Slco6a1
location: join(8664549..8664972,8666844..8667104,8672314..8672505,8674092..8674188,8685145..8685260,8689337..8689446,8697237..8697381,8702850..8703045,8707016..8707169,8715959..8716146,8720522..8720586,8722786..8722923,8731983..8732126,8733166..8733215,8736812..8736980)
location: region:8664549-8736980:1
so has part: feature:8664549-8664972:1:exon
so has part: feature:8666844-8667104:1:exon
so has part: feature:8672314-8672505:1:exon
so has part: feature:8674092-8674188:1:exon
so has part: feature:8685145-8685260:1:exon
so has part: feature:8689337-8689446:1:exon
so has part: feature:8697237-8697381:1:exon
so has part: feature:8702850-8703045:1:exon
so has part: feature:8707016-8707169:1:exon
so has part: feature:8715959-8716146:1:exon
so has part: feature:8720522-8720586:1:exon
so has part: feature:8722786-8722923:1:exon
so has part: feature:8731983-8732126:1:exon
so has part: feature:8733166-8733215:1:exon
so has part: feature:8736812-8736980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8664549-8664972:1:exon

position:8664972:1
position: 8664972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8666844-8667104:1:exon

position:8666844:1
position: 8666844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8667104:1
position: 8667104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8672314-8672505:1:exon

position:8672314:1
position: 8672314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8672505:1
position: 8672505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8674092-8674188:1:exon

position:8674092:1
position: 8674092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8674188:1
position: 8674188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8685145-8685260:1:exon

position:8685145:1
position: 8685145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8685260:1
position: 8685260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8689337-8689446:1:exon

position:8689337:1
position: 8689337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8689446:1
position: 8689446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8697237-8697381:1:exon

position:8697237:1
position: 8697237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8697381:1
position: 8697381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8702850-8703045:1:exon

position:8702850:1
position: 8702850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8703045:1
position: 8703045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8707016-8707169:1:exon

position:8707016:1
position: 8707016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8707169:1
position: 8707169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8715959-8716146:1:exon

position:8715959:1
position: 8715959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8716146:1
position: 8716146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8720522-8720586:1:exon

position:8720522:1
position: 8720522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8720586:1
position: 8720586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8722786-8722923:1:exon

position:8722786:1
position: 8722786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8722923:1
position: 8722923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8731983-8732126:1:exon

position:8731983:1
position: 8731983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8732126:1
position: 8732126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8733166-8733215:1:exon

position:8733166:1
position: 8733166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8733215:1
position: 8733215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8736812-8736980:1:exon

position:8736812:1
position: 8736812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slco6a1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slco6a1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier organic anion transporter family member 6A1
translation: MDQNPEQTHASTAKAPVEIIVEAPADITAEGPVDITAEAPVDITAEAPVNLKAEALVGEWNDVDQESLKVIPYHARLSTAMLDITTLQNTGSEDSSQLSETMPDASLEGPFGLGPLVFSSLQRFNNINYFLISFSILSLAQGIIFGLTDVSTGNFEKDFYLSRAEDVILTIAYDLASLLVAILVAHYGCRGNRSKWVAASAFLVGLGSIIFAVPYLKYEIIRPVEESEELCIDEEQRTMPNCEKNVVPFKSEIICLSIIGQFLQGIAGMPMYILGVTYIYDNVSTYMAGIYLGIADAAQILGYGLGCAVGSPNLRPSFNHSSEKVINENFLLWQFNWFVGFLSATLLAWFTFFPFLCFPHSLPGAHKLKLHKEKDSLYFYKKLKNVKYGSRFQDLFHALWCLLRNPLLMCYSICKATESLASIGAAEFLPKYLENQFLLTPSYATLLTGTILVPAGALGNFLGGFIVSKMKMSCKSQMKFILVTSIISLLLFILNVFVKCERVKFAGINEDYEGSGSLGNLTAPCNAHCGCESTMYSSVCGRDETEYFSPCFAGCLASKSLQYEKTFYNCSCIKHGLATEDSETERIDATYGKCNTHCYALPLFFAFFFSSIVFSSAATIPITLIILRTLPPSLHSLGIAVTYTTLRLFGSIPGPLIFRVTANSSCTYWDINKCGIKGRCWIYNKIKMMSILLGLCIFCKLITTLLTLLALLKYNVIRVGSENVKKKKGTKKRK
SIO_010081: Slco6a1
subclass of: SO_0000673
so part of: Slco6a1
location: join(8664549..8664972,8666844..8667104,8672314..8672505,8674092..8674188,8685145..8685260,8689337..8689446,8697237..8697381,8702850..8703045,8707016..8707169,8715959..8716146,8720522..8720586,8722786..8722923,8731983..8732101)
location: region:8664549-8732101:1
so has part: feature:8664549-8664972:1:exon
so has part: feature:8666844-8667104:1:exon
so has part: feature:8672314-8672505:1:exon
so has part: feature:8674092-8674188:1:exon
so has part: feature:8685145-8685260:1:exon
so has part: feature:8689337-8689446:1:exon
so has part: feature:8697237-8697381:1:exon
so has part: feature:8702850-8703045:1:exon
so has part: feature:8707016-8707169:1:exon
so has part: feature:8715959-8716146:1:exon
so has part: feature:8720522-8720586:1:exon
so has part: feature:8722786-8722923:1:exon
so has part: feature:8731983-8732101:1:exon

XP_034377802.1
type: Protein
SIO_000068: ncbiprotein

position:8732101:1
position: 8732101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8664549-8664972:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8666844-8667104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8672314-8672505:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8674092-8674188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8685145-8685260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8689337-8689446:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8697237-8697381:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8702850-8703045:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8707016-8707169:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8715959-8716146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8720522-8720586:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8722786-8722923:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8731983-8732101:1:exon

LOC117722801
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722801
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 8751581..8751687
location: region:8751581-8751687:1
so has part: feature:8751581-8751687:1:exon
subclass of: SO_0000623

117722801
type: Gene
SIO_000068: ncbigene

position:8751581:1
position: 8751581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8751687:1
position: 8751687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8751581-8751687:1:exon

LOC117722801
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117722801
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608572.1
SIO_010081: LOC117722801
subclass of: SO_0000673
so part of: LOC117722801
location: 8751581..8751687
location: region:8751581-8751687:1
so has part: feature:8751581-8751687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8751581-8751687:1:exon

Slco4c1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slco4c1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8775696..8821430
location: region:8775696-8821430:1
so has part: feature:8775696-8821430:1:exon
subclass of: SO_0000010

117722572
type: Gene
SIO_000068: ncbigene

position:8775696:1
position: 8775696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8821430:1
position: 8821430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8775696-8821430:1:exon

Slco4c1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slco4c1
product: solute carrier organic anion transporter family member 4C1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 Proteins
transcript id: XM_034521800.1
SIO_010081: Slco4c1
subclass of: SO_0000673
so part of: Slco4c1
location: join(8775696..8776102,8779904..8780167,8798562..8798741,8800724..8800820,8802125..8802246,8804056..8804174,8805635..8805779,8806152..8806347,8811130..8811283,8812624..8812814,8816630..8816694,8817336..8817473,8820086..8821430)
location: region:8775696-8821430:1
so has part: feature:8775696-8776102:1:exon
so has part: feature:8779904-8780167:1:exon
so has part: feature:8798562-8798741:1:exon
so has part: feature:8800724-8800820:1:exon
so has part: feature:8802125-8802246:1:exon
so has part: feature:8804056-8804174:1:exon
so has part: feature:8805635-8805779:1:exon
so has part: feature:8806152-8806347:1:exon
so has part: feature:8811130-8811283:1:exon
so has part: feature:8812624-8812814:1:exon
so has part: feature:8816630-8816694:1:exon
so has part: feature:8817336-8817473:1:exon
so has part: feature:8820086-8821430:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8775696-8776102:1:exon

position:8776102:1
position: 8776102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8779904-8780167:1:exon

position:8779904:1
position: 8779904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8780167:1
position: 8780167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8798562-8798741:1:exon

position:8798562:1
position: 8798562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8798741:1
position: 8798741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8800724-8800820:1:exon

position:8800724:1
position: 8800724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8800820:1
position: 8800820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8802125-8802246:1:exon

position:8802125:1
position: 8802125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8802246:1
position: 8802246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8804056-8804174:1:exon

position:8804056:1
position: 8804056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8804174:1
position: 8804174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8805635-8805779:1:exon

position:8805635:1
position: 8805635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8805779:1
position: 8805779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8806152-8806347:1:exon

position:8806152:1
position: 8806152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8806347:1
position: 8806347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8811130-8811283:1:exon

position:8811130:1
position: 8811130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8811283:1
position: 8811283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8812624-8812814:1:exon

position:8812624:1
position: 8812624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8812814:1
position: 8812814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8816630-8816694:1:exon

position:8816630:1
position: 8816630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8816694:1
position: 8816694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8817336-8817473:1:exon

position:8817336:1
position: 8817336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8817473:1
position: 8817473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8820086-8821430:1:exon

position:8820086:1
position: 8820086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slco4c1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slco4c1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier organic anion transporter family member 4C1
translation: MQGSKGIENPAFVPSSPDTPRRASASPSQVEVSTVASRNQNGGSQPRESEEPQKSTEPIPPSSNHPASDEPPGSQLSELEEGPCGWRNFHPQCLQRCNTPQGFLLYYCLLALTQGIVVNGLVNISISTIEKRYEMKSSLTGLISSSYDISFCVLSLFVSFFGERGHKPHWLAVASFMIGLGALVFSLPQFFSGRYELGSILEDTCLTRNSTRCVSSSSLLSNYFYVFVLGQLLLGTGGTPLYTLGTAFIDESVPTHKSSLYIGIGYSMSILGPAIGYVLGGQLLKMYIDVAIGQSSDLTEDDPRWLGAWWIGFLLAWLFAWSLIIPFSCFPKHLPGTAKIQAGKTSQTHQNNSTSFQHTDENFGKSIRDFPTAVKNLMRNTVFICLVLSTTSEALVTTGFATFLPKFIENQFGLTSSFAATLGGAVLIPGAALGQILGGVLVSKFKMKCKNTMKFALCTSGVALVLSFVFIYAKCENEPFAGVSESYNGTGEMGNLTAPCNANCNCLRSYYYPLCGSDGIQYFSPCFAGCLNSVSNRKPKVYYNCSCIERKVEITSTAETTDFEANAGKCKTRCTNLPVFLGIFFITVIFTFMAGTPITVSILRCVNQRQRSLALGVQFMLLRLLGTIPGPIIFGVTIDSTCVLWDVNECGIKGACWIYDNIRMAHMLVAISVTCKVITIFFNGLAVVLYKPPPSETEVSFQSQNVVVSTISVGEDINKGENEG
SIO_010081: Slco4c1
subclass of: SO_0000673
so part of: Slco4c1
location: join(8775760..8776102,8779904..8780167,8798562..8798741,8800724..8800820,8802125..8802246,8804056..8804174,8805635..8805779,8806152..8806347,8811130..8811283,8812624..8812814,8816630..8816694,8817336..8817473,8820086..8820246)
location: region:8775760-8820246:1
so has part: feature:8775760-8776102:1:exon
so has part: feature:8779904-8780167:1:exon
so has part: feature:8798562-8798741:1:exon
so has part: feature:8800724-8800820:1:exon
so has part: feature:8802125-8802246:1:exon
so has part: feature:8804056-8804174:1:exon
so has part: feature:8805635-8805779:1:exon
so has part: feature:8806152-8806347:1:exon
so has part: feature:8811130-8811283:1:exon
so has part: feature:8812624-8812814:1:exon
so has part: feature:8816630-8816694:1:exon
so has part: feature:8817336-8817473:1:exon
so has part: feature:8820086-8820246:1:exon

XP_034377691.1
type: Protein
SIO_000068: ncbiprotein

position:8775760:1
position: 8775760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8820246:1
position: 8820246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8775760-8776102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8779904-8780167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8798562-8798741:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8800724-8800820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8802125-8802246:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8804056-8804174:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8805635-8805779:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8806152-8806347:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8811130-8811283:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8812624-8812814:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8816630-8816694:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8817336-8817473:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8820086-8820246:1:exon

LOC117722603
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722603
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8842292..8843573)
location: region:8842292-8843573:-1
so has part: feature:8842292-8843573:-1:exon

117722603
type: Gene
SIO_000068: ncbigene

position:8842292:-1
position: 8842292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8843573:-1
position: 8843573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8842292-8843573:-1:exon

LOC117722603
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722603
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 53% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722603
subclass of: SO_0000673
so part of: LOC117722603
location: complement(8842292..8843573)
location: region:8842292-8843573:-1
so has part: feature:8842292-8843573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8842292-8843573:-1:exon

LOC117722849
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722849
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8871784..8871909)
location: region:8871784-8871909:-1
so has part: feature:8871784-8871909:-1:exon
subclass of: SO_0000578

117722849
type: Gene
SIO_000068: ncbigene

position:8871784:-1
position: 8871784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8871909:-1
position: 8871909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8871784-8871909:-1:exon

LOC117722849
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117722849
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608607.1
SIO_010081: LOC117722849
subclass of: SO_0000673
so part of: LOC117722849
location: complement(8871784..8871909)
location: region:8871784-8871909:-1
so has part: feature:8871784-8871909:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8871784-8871909:-1:exon

LOC117722632
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8882281..8882604)
location: region:8882281-8882604:-1
so has part: feature:8882281-8882604:-1:exon
subclass of: SO_0000010

117722632
type: Gene
SIO_000068: ncbigene

position:8882281:-1
position: 8882281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8882604:-1
position: 8882604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8882281-8882604:-1:exon

LOC117722632
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117722632
product: small ubiquitin-related modifier 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521880.1
SIO_010081: LOC117722632
subclass of: SO_0000673
so part of: LOC117722632
location: complement(8882281..8882604)
location: region:8882281-8882604:-1
so has part: feature:8882281-8882604:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8882281-8882604:-1:exon

LOC117722632
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117722632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small ubiquitin-related modifier 2-like
translation: MANEKPKEGVKTENNNHINLTVVGQDGSLVQFKIQRRAPLSKLMKAYCEWQGLSMRWIRFWFDGQPINKTDTPSQLEMEDEDTINDFQQQTGGVY
SIO_010081: LOC117722632
subclass of: SO_0000673
so part of: LOC117722632
location: complement(8882317..8882604)
location: region:8882317-8882604:-1
so has part: feature:8882317-8882604:-1:exon

XP_034377771.1
type: Protein
SIO_000068: ncbiprotein

position:8882317:-1
position: 8882317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8882317-8882604:-1:exon

LOC117722800
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722800
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8945117..8945223)
location: region:8945117-8945223:-1
so has part: feature:8945117-8945223:-1:exon
subclass of: SO_0000623

117722800
type: Gene
SIO_000068: ncbigene

position:8945117:-1
position: 8945117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8945223:-1
position: 8945223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8945117-8945223:-1:exon

LOC117722800
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117722800
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608571.1
SIO_010081: LOC117722800
subclass of: SO_0000673
so part of: LOC117722800
location: complement(8945117..8945223)
location: region:8945117-8945223:-1
so has part: feature:8945117-8945223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8945117-8945223:-1:exon

LOC117722576
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9025335..9026559)
location: region:9025335-9026559:-1
so has part: feature:9025335-9026559:-1:exon

117722576
type: Gene
SIO_000068: ncbigene

position:9025335:-1
position: 9025335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9026559:-1
position: 9026559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9025335-9026559:-1:exon

LOC117722576
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722576
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722576
subclass of: SO_0000673
so part of: LOC117722576
location: complement(9025335..9026559)
location: region:9025335-9026559:-1
so has part: feature:9025335-9026559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9025335-9026559:-1:exon

LOC117722715
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9123492..9125665
location: region:9123492-9125665:1
so has part: feature:9123492-9125665:1:exon
subclass of: SO_0000010

117722715
type: Gene
SIO_000068: ncbigene

position:9123492:1
position: 9123492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9125665:1
position: 9125665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9123492-9125665:1:exon

LOC117722715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117722715
product: ral guanine nucleotide dissociation stimulator-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034521974.1
SIO_010081: LOC117722715
subclass of: SO_0000673
so part of: LOC117722715
location: join(9123492..9123668,9124159..9124331,9125443..9125665)
location: region:9123492-9125665:1
so has part: feature:9123492-9123668:1:exon
so has part: feature:9124159-9124331:1:exon
so has part: feature:9125443-9125665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9123492-9123668:1:exon

position:9123668:1
position: 9123668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9124159-9124331:1:exon

position:9124159:1
position: 9124159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9124331:1
position: 9124331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9125443-9125665:1:exon

position:9125443:1
position: 9125443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117722715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117722715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral guanine nucleotide dissociation stimulator-like
translation: MFSCCTRTTRGSGLKKDNREGHRGVWRHRIHSCLQRLWPFSRKGNILPNGSQDQDCADQDLREPSRKPYLSAEAVIKLVSRPVPSLEEENSFFSPAFLSKYRSFVTPLHVKTLELMSYAFFGPYEEDAQVMNTLCGFLHAWMDKNPEDFCGPTDLFPVRYMEAYWSAFMPHSGVIVNNNMLPTPAEGRTD
SIO_010081: LOC117722715
subclass of: SO_0000673
so part of: LOC117722715
location: join(9123492..9123668,9124159..9124331,9125443..9125665)
location: region:9123492-9125665:1
so has part: feature:9123492-9123668:1:exon
so has part: feature:9124159-9124331:1:exon
so has part: feature:9125443-9125665:1:exon

XP_034377865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9123492-9123668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9124159-9124331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9125443-9125665:1:exon

LOC117722171
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9501546..9503848)
location: region:9501546-9503848:-1
so has part: feature:9501546-9503848:-1:exon
subclass of: SO_0000010

117722171
type: Gene
SIO_000068: ncbigene

position:9501546:-1
position: 9501546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9503848:-1
position: 9503848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9501546-9503848:-1:exon

LOC117722171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117722171
product: protein tyrosine phosphatase type IVA 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 22 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521079.1
SIO_010081: LOC117722171
subclass of: SO_0000673
so part of: LOC117722171
location: complement(9501546..9503848)
location: region:9501546-9503848:-1
so has part: feature:9501546-9503848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9501546-9503848:-1:exon

LOC117722171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117722171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase type IVA 1-like
translation: MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQMVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ
SIO_010081: LOC117722171
subclass of: SO_0000673
so part of: LOC117722171
location: complement(9502702..9503223)
location: region:9502702-9503223:-1
so has part: feature:9502702-9503223:-1:exon

XP_034376970.1
type: Protein
SIO_000068: ncbiprotein

position:9502702:-1
position: 9502702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9503223:-1
position: 9503223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9502702-9503223:-1:exon

LOC117722721
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9601130..9601884
location: region:9601130-9601884:1
so has part: feature:9601130-9601884:1:exon

117722721
type: Gene
SIO_000068: ncbigene

position:9601130:1
position: 9601130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9601884:1
position: 9601884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9601130-9601884:1:exon

LOC117722721
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722721
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722721
subclass of: SO_0000673
so part of: LOC117722721
location: 9601130..9601884
location: region:9601130-9601884:1
so has part: feature:9601130-9601884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9601130-9601884:1:exon

St8sia4
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: St8sia4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9881047..9964135
location: region:9881047-9964135:1
so has part: feature:9881047-9964135:1:exon
subclass of: SO_0000010

117722498
type: Gene
SIO_000068: ncbigene

position:9881047:1
position: 9881047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9964135:1
position: 9964135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9881047-9964135:1:exon

St8sia4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: St8sia4
product: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 9 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521682.1
SIO_010081: St8sia4
subclass of: SO_0000673
so part of: St8sia4
location: join(9881047..9881492,9887674..9887805,9896788..9897045,9929748..9930041,9963186..9964135)
location: region:9881047-9964135:1
so has part: feature:9881047-9881492:1:exon
so has part: feature:9887674-9887805:1:exon
so has part: feature:9896788-9897045:1:exon
so has part: feature:9929748-9930041:1:exon
so has part: feature:9963186-9964135:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9881047-9881492:1:exon

position:9881492:1
position: 9881492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9887674-9887805:1:exon

position:9887674:1
position: 9887674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9887805:1
position: 9887805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9896788-9897045:1:exon

position:9896788:1
position: 9896788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9897045:1
position: 9897045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9929748-9930041:1:exon

position:9929748:1
position: 9929748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9930041:1
position: 9930041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9963186-9964135:1:exon

position:9963186:1
position: 9963186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

St8sia4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: St8sia4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-poly-alpha-2, 8-sialyltransferase
translation: MLKVSHLKRNLSPREAAQSDPGQASANCAAGRWAALEKPESSTAEHPGDLILGSRLHAPIAIFRFLPLDYFSKTEPLYQEKVPELGQPGLSRAPKMRSIRKRWTICTISLLLIFYKTKEIARTEEHQETQLIGDGELCLSRSLVNSSDKIIRKAGSTIFQHSVQGWKINSSLVLEIRKNILRFLDAERDVSVVKSSFKPGDVIHYVLDRRRTLNISHDLHSLLPEVSPMKNRRFKTCAVVGNSGILLDSGCGKEIDNHNFVIRCNLAPVVEFAADVGTKSDFITMNPSVVQRAFGGFRNESDREKFVHRLSMLNDSVLWIPAFMVKGGEKHVEWVNALILKNKLKVRTAYPSLRLIHAVRGYWLTNKVPIKRPSTGLLMYTLATRFCDEIHLYGFWPFPKDLNGKAVKYHYYDDLKYRYFSNASPHRMPLEFKTLNVLHNRGALKLTTGKCMKQ
SIO_010081: St8sia4
subclass of: SO_0000673
so part of: St8sia4
location: join(9881095..9881492,9887674..9887805,9896788..9897045,9929748..9930041,9963186..9963468)
location: region:9881095-9963468:1
so has part: feature:9881095-9881492:1:exon
so has part: feature:9887674-9887805:1:exon
so has part: feature:9896788-9897045:1:exon
so has part: feature:9929748-9930041:1:exon
so has part: feature:9963186-9963468:1:exon

XP_034377573.1
type: Protein
SIO_000068: ncbiprotein

position:9881095:1
position: 9881095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9963468:1
position: 9963468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9881095-9881492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9887674-9887805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9896788-9897045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929748-9930041:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9963186-9963468:1:exon

LOC117722722
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10049732..10051301)
location: region:10049732-10051301:-1
so has part: feature:10049732-10051301:-1:exon

117722722
type: Gene
SIO_000068: ncbigene

position:10049732:-1
position: 10049732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10051301:-1
position: 10051301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10049732-10051301:-1:exon

LOC117722722
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722722
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722722
subclass of: SO_0000673
so part of: LOC117722722
location: complement(10049732..10051301)
location: region:10049732-10051301:-1
so has part: feature:10049732-10051301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10049732-10051301:-1:exon

Fam174a
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Fam174a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10205724..10228094)
location: region:10205724-10228094:-1
so has part: feature:10205724-10228094:-1:exon
subclass of: SO_0000010

117722769
type: Gene
SIO_000068: ncbigene

position:10205724:-1
position: 10205724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10228094:-1
position: 10228094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10205724-10228094:-1:exon

Fam174a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fam174a
product: family with sequence similarity 174 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 2 long SRA reads, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034522045.1
SIO_010081: Fam174a
subclass of: SO_0000673
so part of: Fam174a
location: complement(join(10205724..10206180,10217697..10217831,10227448..10228094))
location: region:10205724-10228094:-1
so has part: feature:10227448-10228094:-1:exon
so has part: feature:10217697-10217831:-1:exon
so has part: feature:10205724-10206180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10227448-10228094:-1:exon

position:10227448:-1
position: 10227448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10217697-10217831:-1:exon

position:10217697:-1
position: 10217697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10217831:-1
position: 10217831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10205724-10206180:-1:exon

position:10206180:-1
position: 10206180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fam174a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fam174a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane protein FAM174A
translation: MPTPRGCSGPCHFLAPAFVLLLLPTLSGSGTLPSTGAREVQGYQPLEPGPRTLSPLPPGPTAAQPRGQAQAEATGPRGAESRNGSIPGAGSEADGLEGKAGEGSLGGSLAVSPSPSDKPMTQRALTVLMVVSAAVLVYFVVRTVRMRRRNRKTRRYGVLDTNIENMELTPLEQDDEDDDNTLFDANHPRR
SIO_010081: Fam174a
subclass of: SO_0000673
so part of: Fam174a
location: complement(join(10206177..10206180,10217697..10217831,10227448..10227881))
location: region:10206177-10227881:-1
so has part: feature:10227448-10227881:-1:exon
so has part: feature:10217697-10217831:-1:exon
so has part: feature:10206177-10206180:-1:exon

XP_034377936.1
type: Protein
SIO_000068: ncbiprotein

position:10206177:-1
position: 10206177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10227881:-1
position: 10227881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10227448-10227881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10217697-10217831:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10206177-10206180:-1:exon

LOC117722845
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722845
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 10473395..10473486
location: region:10473395-10473486:1
so has part: feature:10473395-10473486:1:exon

117722845
type: Gene
SIO_000068: ncbigene

position:10473395:1
position: 10473395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10473486:1
position: 10473486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10473395-10473486:1:exon

LOC117722845
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722845
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117722845
subclass of: SO_0000673
so part of: LOC117722845
location: 10473395..10473486
location: region:10473395-10473486:1
so has part: feature:10473395-10473486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10473395-10473486:1:exon

LOC117722723
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722723
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10958775..10971165)
location: region:10958775-10971165:-1
so has part: feature:10958775-10971165:-1:exon

117722723
type: Gene
SIO_000068: ncbigene

position:10958775:-1
position: 10958775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10971165:-1
position: 10971165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10958775-10971165:-1:exon

LOC117722723
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722723
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722723
subclass of: SO_0000673
so part of: LOC117722723
location: complement(10958775..10959851)
location: region:10958775-10959851:-1
so has part: feature:10958775-10959851:-1:exon

position:10959851:-1
position: 10959851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10958775-10959851:-1:exon

LOC117722723
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722723
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722723
subclass of: SO_0000673
so part of: LOC117722723
location: complement(10962979..10963009)
location: region:10962979-10963009:-1
so has part: feature:10962979-10963009:-1:exon

position:10962979:-1
position: 10962979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10963009:-1
position: 10963009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10962979-10963009:-1:exon

LOC117722723
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722723
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722723
subclass of: SO_0000673
so part of: LOC117722723
location: complement(10966748..10966788)
location: region:10966748-10966788:-1
so has part: feature:10966748-10966788:-1:exon

position:10966748:-1
position: 10966748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10966788:-1
position: 10966788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10966748-10966788:-1:exon

LOC117722723
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722723
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117722723
subclass of: SO_0000673
so part of: LOC117722723
location: complement(10971108..10971165)
location: region:10971108-10971165:-1
so has part: feature:10971108-10971165:-1:exon

position:10971108:-1
position: 10971108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10971108-10971165:-1:exon

LOC117722724
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11001213..11003629
location: region:11001213-11003629:1
so has part: feature:11001213-11003629:1:exon

117722724
type: Gene
SIO_000068: ncbigene

position:11001213:1
position: 11001213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11003629:1
position: 11003629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11001213-11003629:1:exon

LOC117722724
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722724
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC117722724
subclass of: SO_0000673
so part of: LOC117722724
location: 11001213..11001484
location: region:11001213-11001484:1
so has part: feature:11001213-11001484:1:exon

position:11001484:1
position: 11001484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11001213-11001484:1:exon

LOC117722724
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722724
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC117722724
subclass of: SO_0000673
so part of: LOC117722724
location: 11002352..11002957
location: region:11002352-11002957:1
so has part: feature:11002352-11002957:1:exon

position:11002352:1
position: 11002352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11002957:1
position: 11002957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11002352-11002957:1:exon

LOC117722724
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722724
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC117722724
subclass of: SO_0000673
so part of: LOC117722724
location: 11003284..11003629
location: region:11003284-11003629:1
so has part: feature:11003284-11003629:1:exon

position:11003284:1
position: 11003284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11003284-11003629:1:exon

LOC117722725
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722725
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(11266989..11277612)
location: region:11266989-11277612:-1
so has part: feature:11266989-11277612:-1:exon

117722725
type: Gene
SIO_000068: ncbigene

position:11266989:-1
position: 11266989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11277612:-1
position: 11277612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11266989-11277612:-1:exon

LOC117722725
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722725
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC117722725
subclass of: SO_0000673
so part of: LOC117722725
location: complement(11266989..11267867)
location: region:11266989-11267867:-1
so has part: feature:11266989-11267867:-1:exon

position:11267867:-1
position: 11267867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11266989-11267867:-1:exon

LOC117722725
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722725
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC117722725
subclass of: SO_0000673
so part of: LOC117722725
location: complement(11272313..11272450)
location: region:11272313-11272450:-1
so has part: feature:11272313-11272450:-1:exon

position:11272313:-1
position: 11272313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11272450:-1
position: 11272450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11272313-11272450:-1:exon

LOC117722725
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722725
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC117722725
subclass of: SO_0000673
so part of: LOC117722725
location: complement(11273406..11273517)
location: region:11273406-11273517:-1
so has part: feature:11273406-11273517:-1:exon

position:11273406:-1
position: 11273406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11273517:-1
position: 11273517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11273406-11273517:-1:exon

LOC117722725
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117722725
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC117722725
subclass of: SO_0000673
so part of: LOC117722725
location: complement(11277599..11277612)
location: region:11277599-11277612:-1
so has part: feature:11277599-11277612:-1:exon

position:11277599:-1
position: 11277599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11277599-11277612:-1:exon

Pdcd1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Pdcd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11434828..11448747
location: region:11434828-11448747:1
so has part: feature:11434828-11448747:1:exon
subclass of: SO_0000010

117722558
type: Gene
SIO_000068: ncbigene

position:11434828:1
position: 11434828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11448747:1
position: 11448747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11434828-11448747:1:exon

Pdcd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pdcd1
product: programmed cell death 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 4 Proteins, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521784.1
SIO_010081: Pdcd1
subclass of: SO_0000673
so part of: Pdcd1
location: join(11434828..11434953,11445443..11445802,11446090..11446251,11446920..11446954,11447469..11448747)
location: region:11434828-11448747:1
so has part: feature:11434828-11434953:1:exon
so has part: feature:11445443-11445802:1:exon
so has part: feature:11446090-11446251:1:exon
so has part: feature:11446920-11446954:1:exon
so has part: feature:11447469-11448747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11434828-11434953:1:exon

position:11434953:1
position: 11434953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11445443-11445802:1:exon

position:11445443:1
position: 11445443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11445802:1
position: 11445802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11446090-11446251:1:exon

position:11446090:1
position: 11446090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11446251:1
position: 11446251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11446920-11446954:1:exon

position:11446920:1
position: 11446920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11446954:1
position: 11446954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11447469-11448747:1:exon

position:11447469:1
position: 11447469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pdcd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pdcd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 1
translation: MWVQQVPWSLIWAVLQLSWQSGWLLEVPNGPWRPLTFSPAWLRVSEGANATFTCSFSNWSEDLRLNWYRLSPSNQTEKQAAFCNGFSQPVRDARFQIIQLPSGHDFHMNILDTRRNDSGIYLCGAISLPPKTQIKESPGAELVVTERILKNSTRYPSPSPKQEGQFQGLVIGIMSVLVGIPILLLLAWALAAFCSTGISEARGAGSKEHPLKEEHSAAPVPSVAYEELDFQGREKTPELPIPCVHTEYATIVFTEGLGASAIGRRGSADGPQGPRPPRHEDGHCSWPL
SIO_010081: Pdcd1
subclass of: SO_0000673
so part of: Pdcd1
location: join(11434878..11434953,11445443..11445802,11446090..11446251,11446920..11446954,11447469..11447702)
location: region:11434878-11447702:1
so has part: feature:11434878-11434953:1:exon
so has part: feature:11445443-11445802:1:exon
so has part: feature:11446090-11446251:1:exon
so has part: feature:11446920-11446954:1:exon
so has part: feature:11447469-11447702:1:exon

XP_034377675.1
type: Protein
SIO_000068: ncbiprotein

position:11434878:1
position: 11434878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11447702:1
position: 11447702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11434878-11434953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11445443-11445802:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11446090-11446251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11446920-11446954:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11447469-11447702:1:exon

Neu4
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Neu4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11469520..11474347)
location: region:11469520-11474347:-1
so has part: feature:11469520-11474347:-1:exon
subclass of: SO_0000010

117722650
type: Gene
SIO_000068: ncbigene

position:11469520:-1
position: 11469520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11474347:-1
position: 11474347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11469520-11474347:-1:exon

Neu4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Neu4
product: neuraminidase 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521899.1
SIO_010081: Neu4
subclass of: SO_0000673
so part of: Neu4
location: complement(join(11469520..11470653,11472177..11472432,11472537..11472769,11474260..11474347))
location: region:11469520-11474347:-1
so has part: feature:11474260-11474347:-1:exon
so has part: feature:11472537-11472769:-1:exon
so has part: feature:11472177-11472432:-1:exon
so has part: feature:11469520-11470653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11474260-11474347:-1:exon

position:11474260:-1
position: 11474260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11472537-11472769:-1:exon

position:11472537:-1
position: 11472537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11472769:-1
position: 11472769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11472177-11472432:-1:exon

position:11472177:-1
position: 11472177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11472432:-1
position: 11472432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11469520-11470653:-1:exon

position:11470653:-1
position: 11470653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Neu4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Neu4
product: neuraminidase 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 35% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521898.1
SIO_010081: Neu4
subclass of: SO_0000673
so part of: Neu4
location: complement(join(11469671..11470653,11472177..11472432,11472537..11472769,11473184..11473220))
location: region:11469671-11473220:-1
so has part: feature:11473184-11473220:-1:exon
so has part: feature:11472537-11472769:-1:exon
so has part: feature:11472177-11472432:-1:exon
so has part: feature:11469671-11470653:-1:exon

position:11469671:-1
position: 11469671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11473220:-1
position: 11473220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11473184-11473220:-1:exon

position:11473184:-1
position: 11473184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11472537-11472769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11472177-11472432:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11469671-11470653:-1:exon

Neu4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Neu4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialidase-4 isoform X1
translation: METSGAPACCHVDSLVPCSYRKGMGPSRIPKRTVLFQRERTGLTYRVPALLCVPPRPTLLAFAEQRLSPDDSHAHRLVLRRGTLTRGSVRWGALNVLETAVLEEHRSMNPCPVLDEHSGTIFLFFIAVLGHTPEAVQIATGKNAARLCCVTSCDAGLTWGGVRDLTEEAIGAALQDWATFAVGPGHGVQLRSGRLLVPAYTYHVDRRECFGRICWTSPHSLAFYSDDHGISWHCGGLVPNLRSGECQLAAVDGDFLYCNARSPLGNRVQALSADEGTSFLPGELVPSLAETARGCQGSIVGFPAPPSIGPRDERWPASPVNTPRSPHLDLSVQESSGEGARGLVEEGWAPRLPPCYPQSRGPENHGLESGPDGDKTPWTPDLPMSSASMLQSPTWLLYSHPAGRRARLHMGIYLSRSPLNPHSWTEPWVIYEGPSGYSDLAFLGPVPGASLAFACLFESGTRASYEDISFCLFSLADVLENVPTGLEMPSLRDKPRGHCWPS
SIO_010081: Neu4
subclass of: SO_0000673
so part of: Neu4
location: complement(join(11469671..11470653,11472177..11472432,11472537..11472769,11473184..11473220))
location: region:11469671-11473220:-1
so has part: feature:11473184-11473220:-1:exon
so has part: feature:11472537-11472769:-1:exon
so has part: feature:11472177-11472432:-1:exon
so has part: feature:11469671-11470653:-1:exon

XP_034377789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11473184-11473220:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11472537-11472769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11472177-11472432:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11469671-11470653:-1:exon

Neu4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Neu4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialidase-4 isoform X2
translation: MGPSRIPKRTVLFQRERTGLTYRVPALLCVPPRPTLLAFAEQRLSPDDSHAHRLVLRRGTLTRGSVRWGALNVLETAVLEEHRSMNPCPVLDEHSGTIFLFFIAVLGHTPEAVQIATGKNAARLCCVTSCDAGLTWGGVRDLTEEAIGAALQDWATFAVGPGHGVQLRSGRLLVPAYTYHVDRRECFGRICWTSPHSLAFYSDDHGISWHCGGLVPNLRSGECQLAAVDGDFLYCNARSPLGNRVQALSADEGTSFLPGELVPSLAETARGCQGSIVGFPAPPSIGPRDERWPASPVNTPRSPHLDLSVQESSGEGARGLVEEGWAPRLPPCYPQSRGPENHGLESGPDGDKTPWTPDLPMSSASMLQSPTWLLYSHPAGRRARLHMGIYLSRSPLNPHSWTEPWVIYEGPSGYSDLAFLGPVPGASLAFACLFESGTRASYEDISFCLFSLADVLENVPTGLEMPSLRDKPRGHCWPS
SIO_010081: Neu4
subclass of: SO_0000673
so part of: Neu4
location: complement(join(11469671..11470653,11472177..11472432,11472537..11472737))
location: region:11469671-11472737:-1
so has part: feature:11472537-11472737:-1:exon
so has part: feature:11472177-11472432:-1:exon
so has part: feature:11469671-11470653:-1:exon

XP_034377790.1
type: Protein
SIO_000068: ncbiprotein

position:11472737:-1
position: 11472737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11472537-11472737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11472177-11472432:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11469671-11470653:-1:exon

Gal3st2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Gal3st2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11490553..11502596)
location: region:11490553-11502596:-1
so has part: feature:11490553-11502596:-1:exon
subclass of: SO_0000010

117722726
type: Gene
SIO_000068: ncbigene

position:11490553:-1
position: 11490553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11502596:-1
position: 11502596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11490553-11502596:-1:exon

Gal3st2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Gal3st2
product: galactose-3-O-sulfotransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521999.1
SIO_010081: Gal3st2
subclass of: SO_0000673
so part of: Gal3st2
location: complement(join(11490553..11491413,11491835..11492102,11492559..11492658,11502590..11502596))
location: region:11490553-11502596:-1
so has part: feature:11502590-11502596:-1:exon
so has part: feature:11492559-11492658:-1:exon
so has part: feature:11491835-11492102:-1:exon
so has part: feature:11490553-11491413:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11502590-11502596:-1:exon

position:11502590:-1
position: 11502590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11492559-11492658:-1:exon

position:11492559:-1
position: 11492559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11492658:-1
position: 11492658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11491835-11492102:-1:exon

position:11491835:-1
position: 11491835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11492102:-1
position: 11492102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11490553-11491413:-1:exon

position:11491413:-1
position: 11491413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gal3st2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Gal3st2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galactose-3-O-sulfotransferase 2
translation: MEGTAHRSFQVVLLFLVLVMFLFVAYLHVDFRLLTPPLGDKAQEPPVTNIMFLKTHKTASSTILNILYRFSESHNLSIALPEGSRMHLGYPWLFVTRYVEGLKQDDHLQHHFNIMCNHLRFNFPEVQKVMPSDTFYFSILRNPVFQLESSFIYYKNYAPAFRRVKSLDEFLADPWRYYNDSVGLNNVYAKNNMWFDFGFDNNAPIDMDYVRTCLLEVEQRFHLVLIADYFDESMVLLRRRLRWQLDDVVSFKLNVRSQSTVSHLTPESQERVKCWCALDWQLYQHFNRTFWAQLHAELSPRQLTEELEQLRKRQRELTSLCLQDPEPKNVTHISDRNLRPYQSGKAKILGYNLRHDLDNTTLRICQMMAMPELQHMAHLYSLQFPNKTPKDISFLKK
SIO_010081: Gal3st2
subclass of: SO_0000673
so part of: Gal3st2
location: complement(join(11490595..11491413,11491835..11492102,11492559..11492658,11502590..11502596))
location: region:11490595-11502596:-1
so has part: feature:11502590-11502596:-1:exon
so has part: feature:11492559-11492658:-1:exon
so has part: feature:11491835-11492102:-1:exon
so has part: feature:11490595-11491413:-1:exon

XP_034377890.1
type: Protein
SIO_000068: ncbiprotein

position:11490595:-1
position: 11490595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11502590-11502596:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11492559-11492658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11491835-11492102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11490595-11491413:-1:exon

D2hgdh
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: D2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11509464..11527823)
location: region:11509464-11527823:-1
so has part: feature:11509464-11527823:-1:exon
subclass of: SO_0000010

117722252
type: Gene
SIO_000068: ncbigene

position:11509464:-1
position: 11509464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11527823:-1
position: 11527823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11509464-11527823:-1:exon

D2hgdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: D2hgdh
product: D-2-hydroxyglutarate dehydrogenase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034521272.1
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11509464..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11526447..11526785,11527776..11527823))
location: region:11509464-11527823:-1
so has part: feature:11527776-11527823:-1:exon
so has part: feature:11526447-11526785:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11509464-11511227:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11527776-11527823:-1:exon

position:11527776:-1
position: 11527776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11526447-11526785:-1:exon

position:11526447:-1
position: 11526447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11526785:-1
position: 11526785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11524040-11524097:-1:exon

position:11524040:-1
position: 11524040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11524097:-1
position: 11524097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11523376-11523515:-1:exon

position:11523376:-1
position: 11523376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11523515:-1
position: 11523515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11521343-11521536:-1:exon

position:11521343:-1
position: 11521343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11521536:-1
position: 11521536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11518010-11518178:-1:exon

position:11518010:-1
position: 11518010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11518178:-1
position: 11518178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11517015-11517158:-1:exon

position:11517015:-1
position: 11517015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11517158:-1
position: 11517158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11516144-11516286:-1:exon

position:11516144:-1
position: 11516144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11516286:-1
position: 11516286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11512786-11512951:-1:exon

position:11512786:-1
position: 11512786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11512951:-1
position: 11512951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11509464-11511227:-1:exon

position:11511227:-1
position: 11511227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

D2hgdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: D2hgdh
product: D-2-hydroxyglutarate dehydrogenase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034521270.1
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11509464..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11526447..11526790,11527512..11527610))
location: region:11509464-11527610:-1
so has part: feature:11527512-11527610:-1:exon
so has part: feature:11526447-11526790:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11509464-11511227:-1:exon

position:11527610:-1
position: 11527610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11527512-11527610:-1:exon

position:11527512:-1
position: 11527512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11526447-11526790:-1:exon

position:11526790:-1
position: 11526790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11523376-11523515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11509464-11511227:-1:exon

D2hgdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: D2hgdh
product: D-2-hydroxyglutarate dehydrogenase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034521273.1
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11509464..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11526447..11526785,11527512..11527538))
location: region:11509464-11527538:-1
so has part: feature:11527512-11527538:-1:exon
so has part: feature:11526447-11526785:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11509464-11511227:-1:exon

position:11527538:-1
position: 11527538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11527512-11527538:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11526447-11526785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11523376-11523515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11509464-11511227:-1:exon

D2hgdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: D2hgdh
product: D-2-hydroxyglutarate dehydrogenase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034521271.1
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11509464..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11526447..11526790,11527435..11527492))
location: region:11509464-11527492:-1
so has part: feature:11527435-11527492:-1:exon
so has part: feature:11526447-11526790:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11509464-11511227:-1:exon

position:11527492:-1
position: 11527492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11527435-11527492:-1:exon

position:11527435:-1
position: 11527435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11526447-11526790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11523376-11523515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11509464-11511227:-1:exon

D2hgdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: D2hgdh
product: D-2-hydroxyglutarate dehydrogenase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034521274.1
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11509464..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11526187..11526216))
location: region:11509464-11526216:-1
so has part: feature:11526187-11526216:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11509464-11511227:-1:exon

position:11526216:-1
position: 11526216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11526187-11526216:-1:exon

position:11526187:-1
position: 11526187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11523376-11523515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11509464-11511227:-1:exon

D2hgdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: D2hgdh
product: D-2-hydroxyglutarate dehydrogenase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034521275.1
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11509464..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11524040..11524097,11526187..11526215))
location: region:11509464-11526215:-1
so has part: feature:11526187-11526215:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11509464-11511227:-1:exon

position:11526215:-1
position: 11526215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11526187-11526215:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11509464-11511227:-1:exon

D2hgdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: D2hgdh
product: D-2-hydroxyglutarate dehydrogenase, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521276.1
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11509464..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11524307..11524327))
location: region:11509464-11524327:-1
so has part: feature:11524307-11524327:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11509464-11511227:-1:exon

position:11524327:-1
position: 11524327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11524307-11524327:-1:exon

position:11524307:-1
position: 11524307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11523376-11523515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11509464-11511227:-1:exon

D2hgdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: D2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1
translation: MRMLCACRAAFFRLRAEAMVLHLVPRWSARLFWASPGWRRTYTRGASVRLKWLGCPRGMYSPLACRAYSAVAGGPEVMLTPERYPVQRLPFSTVSEEDLAAFEYIIPGRVITDPEQLHACNVDWLRTVRGCSKVLLRPQTSEEVSQILRHCYKRNLAVNPQGGNTGMVGGSVPVFDEVILSTALMNQVISFHDVSGILVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRGTVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPKPKAVNVAFLGCPGFTEVLQTFRTCKGMLGEILSAFEFMDTECMQLVGQHLHLTNPVQESPFYVLVETSGSSAGHDAEKLTSVLEQVLNSGLVTDGTMATDQRKVQMLWALRERITEALSRDGYVFKYDLSLPVERLYDLVIDLRTRLGPHAKHVVGYGHLGDGNLHLNVTAEAFSQELLGALEPYVYAWTAEQRGSVSAEHGLGFKKKNVLSYSKSPVAVKLMQQLKAMLDPKGILNPYKTLPAQA
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11510968..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11526447..11526790,11527512..11527555))
location: region:11510968-11527555:-1
so has part: feature:11527512-11527555:-1:exon
so has part: feature:11526447-11526790:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11510968-11511227:-1:exon

XP_034377161.1
type: Protein
SIO_000068: ncbiprotein

position:11510968:-1
position: 11510968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11527555:-1
position: 11527555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11527512-11527555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11526447-11526790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11523376-11523515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11510968-11511227:-1:exon

D2hgdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: D2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2
translation: MVLHLVPRWSARLFWASPGWRRTYTRGASVRLKWLGCPRGMYSPLACRAYSAVAGGPEVMLTPERYPVQRLPFSTVSEEDLAAFEYIIPGRVITDPEQLHACNVDWLRTVRGCSKVLLRPQTSEEVSQILRHCYKRNLAVNPQGGNTGMVGGSVPVFDEVILSTALMNQVISFHDVSGILVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRGTVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPKPKAVNVAFLGCPGFTEVLQTFRTCKGMLGEILSAFEFMDTECMQLVGQHLHLTNPVQESPFYVLVETSGSSAGHDAEKLTSVLEQVLNSGLVTDGTMATDQRKVQMLWALRERITEALSRDGYVFKYDLSLPVERLYDLVIDLRTRLGPHAKHVVGYGHLGDGNLHLNVTAEAFSQELLGALEPYVYAWTAEQRGSVSAEHGLGFKKKNVLSYSKSPVAVKLMQQLKAMLDPKGILNPYKTLPAQA
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11510968..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11526447..11526780))
location: region:11510968-11526780:-1
so has part: feature:11526447-11526780:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11510968-11511227:-1:exon

XP_034377162.1
type: Protein
SIO_000068: ncbiprotein

position:11526780:-1
position: 11526780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11526447-11526780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11523376-11523515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11510968-11511227:-1:exon

D2hgdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: D2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2
translation: MVLHLVPRWSARLFWASPGWRRTYTRGASVRLKWLGCPRGMYSPLACRAYSAVAGGPEVMLTPERYPVQRLPFSTVSEEDLAAFEYIIPGRVITDPEQLHACNVDWLRTVRGCSKVLLRPQTSEEVSQILRHCYKRNLAVNPQGGNTGMVGGSVPVFDEVILSTALMNQVISFHDVSGILVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRGTVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPKPKAVNVAFLGCPGFTEVLQTFRTCKGMLGEILSAFEFMDTECMQLVGQHLHLTNPVQESPFYVLVETSGSSAGHDAEKLTSVLEQVLNSGLVTDGTMATDQRKVQMLWALRERITEALSRDGYVFKYDLSLPVERLYDLVIDLRTRLGPHAKHVVGYGHLGDGNLHLNVTAEAFSQELLGALEPYVYAWTAEQRGSVSAEHGLGFKKKNVLSYSKSPVAVKLMQQLKAMLDPKGILNPYKTLPAQA
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11510968..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11526447..11526780))
location: region:11510968-11526780:-1
so has part: feature:11526447-11526780:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11510968-11511227:-1:exon

XP_034377163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11526447-11526780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11523376-11523515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11510968-11511227:-1:exon

D2hgdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: D2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2
translation: MVLHLVPRWSARLFWASPGWRRTYTRGASVRLKWLGCPRGMYSPLACRAYSAVAGGPEVMLTPERYPVQRLPFSTVSEEDLAAFEYIIPGRVITDPEQLHACNVDWLRTVRGCSKVLLRPQTSEEVSQILRHCYKRNLAVNPQGGNTGMVGGSVPVFDEVILSTALMNQVISFHDVSGILVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRGTVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPKPKAVNVAFLGCPGFTEVLQTFRTCKGMLGEILSAFEFMDTECMQLVGQHLHLTNPVQESPFYVLVETSGSSAGHDAEKLTSVLEQVLNSGLVTDGTMATDQRKVQMLWALRERITEALSRDGYVFKYDLSLPVERLYDLVIDLRTRLGPHAKHVVGYGHLGDGNLHLNVTAEAFSQELLGALEPYVYAWTAEQRGSVSAEHGLGFKKKNVLSYSKSPVAVKLMQQLKAMLDPKGILNPYKTLPAQA
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11510968..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523515,11524040..11524097,11526447..11526780))
location: region:11510968-11526780:-1
so has part: feature:11526447-11526780:-1:exon
so has part: feature:11524040-11524097:-1:exon
so has part: feature:11523376-11523515:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11510968-11511227:-1:exon

XP_034377164.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11526447-11526780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11524040-11524097:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11523376-11523515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11510968-11511227:-1:exon

D2hgdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: D2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X3
translation: MVGGSVPVFDEVILSTALMNQVISFHDVSGILVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRGTVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPKPKAVNVAFLGCPGFTEVLQTFRTCKGMLGEILSAFEFMDTECMQLVGQHLHLTNPVQESPFYVLVETSGSSAGHDAEKLTSVLEQVLNSGLVTDGTMATDQRKVQMLWALRERITEALSRDGYVFKYDLSLPVERLYDLVIDLRTRLGPHAKHVVGYGHLGDGNLHLNVTAEAFSQELLGALEPYVYAWTAEQRGSVSAEHGLGFKKKNVLSYSKSPVAVKLMQQLKAMLDPKGILNPYKTLPAQA
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11510968..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523463))
location: region:11510968-11523463:-1
so has part: feature:11523376-11523463:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11510968-11511227:-1:exon

XP_034377165.1
type: Protein
SIO_000068: ncbiprotein

position:11523463:-1
position: 11523463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11523376-11523463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11510968-11511227:-1:exon

D2hgdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: D2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X3
translation: MVGGSVPVFDEVILSTALMNQVISFHDVSGILVCQAGCVLEELSRYVQERDFIMPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRGTVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPKPKAVNVAFLGCPGFTEVLQTFRTCKGMLGEILSAFEFMDTECMQLVGQHLHLTNPVQESPFYVLVETSGSSAGHDAEKLTSVLEQVLNSGLVTDGTMATDQRKVQMLWALRERITEALSRDGYVFKYDLSLPVERLYDLVIDLRTRLGPHAKHVVGYGHLGDGNLHLNVTAEAFSQELLGALEPYVYAWTAEQRGSVSAEHGLGFKKKNVLSYSKSPVAVKLMQQLKAMLDPKGILNPYKTLPAQA
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11510968..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521536,11523376..11523463))
location: region:11510968-11523463:-1
so has part: feature:11523376-11523463:-1:exon
so has part: feature:11521343-11521536:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11510968-11511227:-1:exon

XP_034377167.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11523376-11523463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11521343-11521536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11510968-11511227:-1:exon

D2hgdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: D2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X4
translation: MPLDLGAKGSCHIGGNVATNAGGLRFLRYGSLRGTVLGLEVVLADGTILNCLTSLRKDNTGYDLKQMFIGSEGTLGVITAVSIVCPPKPKAVNVAFLGCPGFTEVLQTFRTCKGMLGEILSAFEFMDTECMQLVGQHLHLTNPVQESPFYVLVETSGSSAGHDAEKLTSVLEQVLNSGLVTDGTMATDQRKVQMLWALRERITEALSRDGYVFKYDLSLPVERLYDLVIDLRTRLGPHAKHVVGYGHLGDGNLHLNVTAEAFSQELLGALEPYVYAWTAEQRGSVSAEHGLGFKKKNVLSYSKSPVAVKLMQQLKAMLDPKGILNPYKTLPAQA
SIO_010081: D2hgdh
subclass of: SO_0000673
so part of: D2hgdh
location: complement(join(11510968..11511227,11512786..11512951,11516144..11516286,11517015..11517158,11518010..11518178,11521343..11521465))
location: region:11510968-11521465:-1
so has part: feature:11521343-11521465:-1:exon
so has part: feature:11518010-11518178:-1:exon
so has part: feature:11517015-11517158:-1:exon
so has part: feature:11516144-11516286:-1:exon
so has part: feature:11512786-11512951:-1:exon
so has part: feature:11510968-11511227:-1:exon

XP_034377166.1
type: Protein
SIO_000068: ncbiprotein

position:11521465:-1
position: 11521465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11521343-11521465:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11518010-11518178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11517015-11517158:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11516144-11516286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11512786-11512951:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11510968-11511227:-1:exon

Ing5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ing5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11530950..11548057)
location: region:11530950-11548057:-1
so has part: feature:11530950-11548057:-1:exon
subclass of: SO_0000010

117722253
type: Gene
SIO_000068: ncbigene

position:11530950:-1
position: 11530950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11548057:-1
position: 11548057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11530950-11548057:-1:exon

Ing5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ing5
product: inhibitor of growth family member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 2 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034521277.1
SIO_010081: Ing5
subclass of: SO_0000673
so part of: Ing5
location: complement(join(11530950..11534781,11537240..11537301,11537424..11537559,11540691..11540784,11540932..11541043,11541768..11541934,11545548..11545619,11547989..11548057))
location: region:11530950-11548057:-1
so has part: feature:11547989-11548057:-1:exon
so has part: feature:11545548-11545619:-1:exon
so has part: feature:11541768-11541934:-1:exon
so has part: feature:11540932-11541043:-1:exon
so has part: feature:11540691-11540784:-1:exon
so has part: feature:11537424-11537559:-1:exon
so has part: feature:11537240-11537301:-1:exon
so has part: feature:11530950-11534781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11547989-11548057:-1:exon

position:11547989:-1
position: 11547989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11545548-11545619:-1:exon

position:11545548:-1
position: 11545548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11545619:-1
position: 11545619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11541768-11541934:-1:exon

position:11541768:-1
position: 11541768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11541934:-1
position: 11541934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11540932-11541043:-1:exon

position:11540932:-1
position: 11540932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11541043:-1
position: 11541043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11540691-11540784:-1:exon

position:11540691:-1
position: 11540691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11540784:-1
position: 11540784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11537424-11537559:-1:exon

position:11537424:-1
position: 11537424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11537559:-1
position: 11537559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11537240-11537301:-1:exon

position:11537240:-1
position: 11537240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11537301:-1
position: 11537301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11530950-11534781:-1:exon

position:11534781:-1
position: 11534781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ing5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ing5
product: inhibitor of growth family member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521278.1
SIO_010081: Ing5
subclass of: SO_0000673
so part of: Ing5
location: complement(join(11532966..11534781,11537240..11537301,11537424..11537559,11540691..11540784,11540932..11541043,11541768..11541934,11545548..11545619,11547257..11547304))
location: region:11532966-11547304:-1
so has part: feature:11547257-11547304:-1:exon
so has part: feature:11545548-11545619:-1:exon
so has part: feature:11541768-11541934:-1:exon
so has part: feature:11540932-11541043:-1:exon
so has part: feature:11540691-11540784:-1:exon
so has part: feature:11537424-11537559:-1:exon
so has part: feature:11537240-11537301:-1:exon
so has part: feature:11532966-11534781:-1:exon

position:11532966:-1
position: 11532966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11547304:-1
position: 11547304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11547257-11547304:-1:exon

position:11547257:-1
position: 11547257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11545548-11545619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11541768-11541934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11540932-11541043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11540691-11540784:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11537424-11537559:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11537240-11537301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11532966-11534781:-1:exon

Ing5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ing5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of growth protein 5 isoform X1
translation: MATAMYLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSSAQRVEHLQKIQSAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDRMDGSDFESTGPRSLKKGRSQKEKRSSRGRGRRTSEEDTPKKKKHKSGSEFTDSILSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRKKK
SIO_010081: Ing5
subclass of: SO_0000673
so part of: Ing5
location: complement(join(11534739..11534781,11537240..11537301,11537424..11537559,11540691..11540784,11540932..11541043,11541768..11541934,11545548..11545619,11547989..11548025))
location: region:11534739-11548025:-1
so has part: feature:11547989-11548025:-1:exon
so has part: feature:11545548-11545619:-1:exon
so has part: feature:11541768-11541934:-1:exon
so has part: feature:11540932-11541043:-1:exon
so has part: feature:11540691-11540784:-1:exon
so has part: feature:11537424-11537559:-1:exon
so has part: feature:11537240-11537301:-1:exon
so has part: feature:11534739-11534781:-1:exon

XP_034377168.1
type: Protein
SIO_000068: ncbiprotein

position:11534739:-1
position: 11534739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11548025:-1
position: 11548025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11547989-11548025:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11545548-11545619:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11541768-11541934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11540932-11541043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11540691-11540784:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11537424-11537559:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11537240-11537301:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11534739-11534781:-1:exon

Ing5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ing5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of growth protein 5 isoform X2
translation: MRELDQRTEDKKAEIDILAAEYISTVKTLSSAQRVEHLQKIQSAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFEADLKDRMDGSDFESTGPRSLKKGRSQKEKRSSRGRGRRTSEEDTPKKKKHKSGSEFTDSILSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKRKKK
SIO_010081: Ing5
subclass of: SO_0000673
so part of: Ing5
location: complement(join(11534739..11534781,11537240..11537301,11537424..11537559,11540691..11540784,11540932..11541043,11541768..11541934,11545548..11545575))
location: region:11534739-11545575:-1
so has part: feature:11545548-11545575:-1:exon
so has part: feature:11541768-11541934:-1:exon
so has part: feature:11540932-11541043:-1:exon
so has part: feature:11540691-11540784:-1:exon
so has part: feature:11537424-11537559:-1:exon
so has part: feature:11537240-11537301:-1:exon
so has part: feature:11534739-11534781:-1:exon

XP_034377169.1
type: Protein
SIO_000068: ncbiprotein

position:11545575:-1
position: 11545575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11545548-11545575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11541768-11541934:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11540932-11541043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11540691-11540784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11537424-11537559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11537240-11537301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11534739-11534781:-1:exon

LOC117722807
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722807
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 11542961..11543064
location: region:11542961-11543064:1
so has part: feature:11542961-11543064:1:exon
subclass of: SO_0000623

117722807
type: Gene
SIO_000068: ncbigene

position:11542961:1
position: 11542961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11543064:1
position: 11543064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11542961-11543064:1:exon

LOC117722807
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117722807
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608577.1
SIO_010081: LOC117722807
subclass of: SO_0000673
so part of: LOC117722807
location: 11542961..11543064
location: region:11542961-11543064:1
so has part: feature:11542961-11543064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11542961-11543064:1:exon

Dtymk
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Dtymk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11549965..11558321
location: region:11549965-11558321:1
so has part: feature:11549965-11558321:1:exon
subclass of: SO_0000010

117722206
type: Gene
SIO_000068: ncbigene

position:11549965:1
position: 11549965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11558321:1
position: 11558321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11549965-11558321:1:exon

Dtymk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dtymk
product: deoxythymidylate kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 1 long SRA read, 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521154.1
SIO_010081: Dtymk
subclass of: SO_0000673
so part of: Dtymk
location: join(11549965..11550274,11551100..11551208,11553502..11553592,11556084..11556281,11557906..11558321)
location: region:11549965-11558321:1
so has part: feature:11549965-11550274:1:exon
so has part: feature:11551100-11551208:1:exon
so has part: feature:11553502-11553592:1:exon
so has part: feature:11556084-11556281:1:exon
so has part: feature:11557906-11558321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11549965-11550274:1:exon

position:11550274:1
position: 11550274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11551100-11551208:1:exon

position:11551100:1
position: 11551100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11551208:1
position: 11551208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11553502-11553592:1:exon

position:11553502:1
position: 11553502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11553592:1
position: 11553592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11556084-11556281:1:exon

position:11556084:1
position: 11556084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11556281:1
position: 11556281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11557906-11558321:1:exon

position:11557906:1
position: 11557906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dtymk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dtymk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thymidylate kinase
translation: MASRRGALIVLEGVDRAGKTTQGQRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTELEDHSVHLLFSANRWEQVPLIKAKLNQGVTLVLDRYAFSGVAFTGAKENFSLDWCKQSDVGLPKPDLILFLQLHLLDAAARGEFGLERYETGTFQEQVLLCFQELMSDKNLNWKVVDASKSIEDVHKEIRALSEDAIQNAAQRPLEELWK
SIO_010081: Dtymk
subclass of: SO_0000673
so part of: Dtymk
location: join(11550145..11550274,11551100..11551208,11553502..11553592,11556084..11556281,11557906..11558016)
location: region:11550145-11558016:1
so has part: feature:11550145-11550274:1:exon
so has part: feature:11551100-11551208:1:exon
so has part: feature:11553502-11553592:1:exon
so has part: feature:11556084-11556281:1:exon
so has part: feature:11557906-11558016:1:exon

XP_034377045.1
type: Protein
SIO_000068: ncbiprotein

position:11550145:1
position: 11550145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11558016:1
position: 11558016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11550145-11550274:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11551100-11551208:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11553502-11553592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11556084-11556281:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11557906-11558016:1:exon

Atg4b
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Atg4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11559598..11591201)
location: region:11559598-11591201:-1
so has part: feature:11559598-11591201:-1:exon
subclass of: SO_0000010

117722205
type: Gene
SIO_000068: ncbigene

position:11559598:-1
position: 11559598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11591201:-1
position: 11591201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11559598-11591201:-1:exon

Atg4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Atg4b
product: autophagy related 4B cysteine peptidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 mRNAs, 6 long SRA reads, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521152.1
SIO_010081: Atg4b
subclass of: SO_0000673
so part of: Atg4b
location: complement(join(11559598..11561314,11563173..11563266,11563822..11563878,11565372..11565517,11565782..11565860,11567080..11567273,11569489..11569568,11573129..11573201,11573598..11573699,11574932..11575030,11579779..11579850,11579950..11580051,11591057..11591201))
location: region:11559598-11591201:-1
so has part: feature:11591057-11591201:-1:exon
so has part: feature:11579950-11580051:-1:exon
so has part: feature:11579779-11579850:-1:exon
so has part: feature:11574932-11575030:-1:exon
so has part: feature:11573598-11573699:-1:exon
so has part: feature:11573129-11573201:-1:exon
so has part: feature:11569489-11569568:-1:exon
so has part: feature:11567080-11567273:-1:exon
so has part: feature:11565782-11565860:-1:exon
so has part: feature:11565372-11565517:-1:exon
so has part: feature:11563822-11563878:-1:exon
so has part: feature:11563173-11563266:-1:exon
so has part: feature:11559598-11561314:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11591057-11591201:-1:exon

position:11591057:-1
position: 11591057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11579950-11580051:-1:exon

position:11579950:-1
position: 11579950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11580051:-1
position: 11580051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11579779-11579850:-1:exon

position:11579779:-1
position: 11579779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11579850:-1
position: 11579850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11574932-11575030:-1:exon

position:11574932:-1
position: 11574932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11575030:-1
position: 11575030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11573598-11573699:-1:exon

position:11573598:-1
position: 11573598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11573699:-1
position: 11573699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11573129-11573201:-1:exon

position:11573129:-1
position: 11573129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11573201:-1
position: 11573201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11569489-11569568:-1:exon

position:11569489:-1
position: 11569489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11569568:-1
position: 11569568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11567080-11567273:-1:exon

position:11567080:-1
position: 11567080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11567273:-1
position: 11567273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11565782-11565860:-1:exon

position:11565782:-1
position: 11565782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11565860:-1
position: 11565860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11565372-11565517:-1:exon

position:11565372:-1
position: 11565372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11565517:-1
position: 11565517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11563822-11563878:-1:exon

position:11563822:-1
position: 11563822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11563878:-1
position: 11563878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11563173-11563266:-1:exon

position:11563173:-1
position: 11563173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11563266:-1
position: 11563266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11559598-11561314:-1:exon

position:11561314:-1
position: 11561314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Atg4b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Atg4b
product: autophagy related 4B cysteine peptidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 3 long SRA reads, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034521153.1
SIO_010081: Atg4b
subclass of: SO_0000673
so part of: Atg4b
location: complement(join(11559606..11561314,11563173..11563266,11563822..11563878,11565372..11565517,11565782..11565860,11567080..11567273,11569489..11569568,11573129..11573201,11573598..11573699,11574932..11575030,11579779..11579850,11579950..11580051,11590004..11590044,11591057..11591174))
location: region:11559606-11591174:-1
so has part: feature:11591057-11591174:-1:exon
so has part: feature:11590004-11590044:-1:exon
so has part: feature:11579950-11580051:-1:exon
so has part: feature:11579779-11579850:-1:exon
so has part: feature:11574932-11575030:-1:exon
so has part: feature:11573598-11573699:-1:exon
so has part: feature:11573129-11573201:-1:exon
so has part: feature:11569489-11569568:-1:exon
so has part: feature:11567080-11567273:-1:exon
so has part: feature:11565782-11565860:-1:exon
so has part: feature:11565372-11565517:-1:exon
so has part: feature:11563822-11563878:-1:exon
so has part: feature:11563173-11563266:-1:exon
so has part: feature:11559606-11561314:-1:exon

position:11559606:-1
position: 11559606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11591174:-1
position: 11591174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11591057-11591174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11590004-11590044:-1:exon

position:11590004:-1
position: 11590004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11590044:-1
position: 11590044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11579950-11580051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11579779-11579850:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11574932-11575030:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11573598-11573699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11573129-11573201:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11569489-11569568:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11567080-11567273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11565782-11565860:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11565372-11565517:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11563822-11563878:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11563173-11563266:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11559606-11561314:-1:exon

Atg4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Atg4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4B isoform X1
translation: MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRRNFPAIGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDNYLNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRASLPCAGAAALPTDSERHCNGFPAGAEVTNRPSAWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVELTDSCFIPDESFHCQHPPCRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGALPMFELVEQQPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEILSL
SIO_010081: Atg4b
subclass of: SO_0000673
so part of: Atg4b
location: complement(join(11561241..11561314,11563173..11563266,11563822..11563878,11565372..11565517,11565782..11565860,11567080..11567273,11569489..11569568,11573129..11573201,11573598..11573699,11574932..11575030,11579779..11579850,11579950..11580051,11591057..11591066))
location: region:11561241-11591066:-1
so has part: feature:11591057-11591066:-1:exon
so has part: feature:11579950-11580051:-1:exon
so has part: feature:11579779-11579850:-1:exon
so has part: feature:11574932-11575030:-1:exon
so has part: feature:11573598-11573699:-1:exon
so has part: feature:11573129-11573201:-1:exon
so has part: feature:11569489-11569568:-1:exon
so has part: feature:11567080-11567273:-1:exon
so has part: feature:11565782-11565860:-1:exon
so has part: feature:11565372-11565517:-1:exon
so has part: feature:11563822-11563878:-1:exon
so has part: feature:11563173-11563266:-1:exon
so has part: feature:11561241-11561314:-1:exon

XP_034377043.1
type: Protein
SIO_000068: ncbiprotein

position:11561241:-1
position: 11561241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11591066:-1
position: 11591066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11591057-11591066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11579950-11580051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11579779-11579850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11574932-11575030:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11573598-11573699:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11573129-11573201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11569489-11569568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11567080-11567273:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11565782-11565860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11565372-11565517:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11563822-11563878:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11563173-11563266:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11561241-11561314:-1:exon

Atg4b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Atg4b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine protease ATG4B isoform X2
translation: MLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDNYLNVLNAFLDRKDSYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIRRLCRASLPCAGAAALPTDSERHCNGFPAGAEVTNRPSAWRPLVLLIPLRLGLTDINEAYVETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVELTDSCFIPDESFHCQHPPCRMGIGELDPSIAVGFFCKTEEDFNDWCQQVKKLSQLGGALPMFELVEQQPSHLACQDVLNLSLDSSDVERLERFFDSEDEDFEILSL
SIO_010081: Atg4b
subclass of: SO_0000673
so part of: Atg4b
location: complement(join(11561241..11561314,11563173..11563266,11563822..11563878,11565372..11565517,11565782..11565860,11567080..11567273,11569489..11569568,11573129..11573201,11573598..11573699,11574932..11574992))
location: region:11561241-11574992:-1
so has part: feature:11574932-11574992:-1:exon
so has part: feature:11573598-11573699:-1:exon
so has part: feature:11573129-11573201:-1:exon
so has part: feature:11569489-11569568:-1:exon
so has part: feature:11567080-11567273:-1:exon
so has part: feature:11565782-11565860:-1:exon
so has part: feature:11565372-11565517:-1:exon
so has part: feature:11563822-11563878:-1:exon
so has part: feature:11563173-11563266:-1:exon
so has part: feature:11561241-11561314:-1:exon

XP_034377044.1
type: Protein
SIO_000068: ncbiprotein

position:11574992:-1
position: 11574992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11574932-11574992:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11573598-11573699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11573129-11573201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11569489-11569568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11567080-11567273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11565782-11565860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11565372-11565517:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11563822-11563878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11563173-11563266:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11561241-11561314:-1:exon

Thap4
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Thap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11591344..11634856
location: region:11591344-11634856:1
so has part: feature:11591344-11634856:1:exon
subclass of: SO_0000010

117722644
type: Gene
SIO_000068: ncbigene

position:11591344:1
position: 11591344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11634856:1
position: 11634856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11591344-11634856:1:exon

Thap4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Thap4
product: THAP domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521891.1
SIO_010081: Thap4
subclass of: SO_0000673
so part of: Thap4
location: join(11591344..11591659,11594431..11595569,11616303..11616462,11625333..11625442,11626655..11626758,11634560..11634856)
location: region:11591344-11634856:1
so has part: feature:11591344-11591659:1:exon
so has part: feature:11594431-11595569:1:exon
so has part: feature:11616303-11616462:1:exon
so has part: feature:11625333-11625442:1:exon
so has part: feature:11626655-11626758:1:exon
so has part: feature:11634560-11634856:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11591344-11591659:1:exon

position:11591659:1
position: 11591659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11594431-11595569:1:exon

position:11594431:1
position: 11594431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11595569:1
position: 11595569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11616303-11616462:1:exon

position:11616303:1
position: 11616303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11616462:1
position: 11616462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11625333-11625442:1:exon

position:11625333:1
position: 11625333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11625442:1
position: 11625442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11626655-11626758:1:exon

position:11626655:1
position: 11626655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11626758:1
position: 11626758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11634560-11634856:1:exon

position:11634560:1
position: 11634560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Thap4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Thap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THAP domain-containing protein 4 isoform X1
translation: MVICCAAVNCSNRQGKGEKRAVSFHRFPLKDSKRLIQWLKAVQRDNWTPTKYSFLCSEHFTKDSFSKRLEDQHRLLKPTAVPSIFHLSEKKRGPGGHGHARRKTTGAMRGHTSAATGKGTIGSSLSSSDNLMAKPESRRLKRASPQGDAAPKATPGAVSQEQGQSLERTPGDDQAAPLAGGQEEAQVAAKEADHQKASSSADTGGADKSGISMDDFTPPGSGACKFIGSLHSYSFSSKHTRERPSVPREPMDRKRLKKDIEPRCSGNSVAQSPPSSSLTATPQKASQSPSAPPTDVTPKPAAEAVQSEHSDANPMSINEVILSASGACKLIDSLHSYCFSARQNKSQVCCLREQVEKKNGELKSLRQRVSRSDSQVRKLREKLDELRRASLPYLPYLSGLLPPSHEPPKLNPVVEPLSWMLGTWLSDPPGVGTFPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPETHKPMHRECGFIRLKPDTNKVAFVSAQNTGIVEVEEGEVNGQELSVSSHSISRISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHITYKKVTP
SIO_010081: Thap4
subclass of: SO_0000673
so part of: Thap4
location: join(11591583..11591659,11594431..11595569,11616303..11616462,11625333..11625442,11626655..11626758,11634560..11634679)
location: region:11591583-11634679:1
so has part: feature:11591583-11591659:1:exon
so has part: feature:11594431-11595569:1:exon
so has part: feature:11616303-11616462:1:exon
so has part: feature:11625333-11625442:1:exon
so has part: feature:11626655-11626758:1:exon
so has part: feature:11634560-11634679:1:exon

XP_034377782.1
type: Protein
SIO_000068: ncbiprotein

position:11591583:1
position: 11591583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11634679:1
position: 11634679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11591583-11591659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11594431-11595569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11616303-11616462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11625333-11625442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11626655-11626758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11634560-11634679:1:exon

Thap4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Thap4
product: THAP domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034521892.1
SIO_010081: Thap4
subclass of: SO_0000673
so part of: Thap4
location: join(11609533..11609552,11616303..11616462,11625333..11625442,11626655..11626758,11634560..11634856)
location: region:11609533-11634856:1
so has part: feature:11609533-11609552:1:exon
so has part: feature:11616303-11616462:1:exon
so has part: feature:11625333-11625442:1:exon
so has part: feature:11626655-11626758:1:exon
so has part: feature:11634560-11634856:1:exon

position:11609533:1
position: 11609533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11609533-11609552:1:exon

position:11609552:1
position: 11609552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11616303-11616462:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11625333-11625442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11626655-11626758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11634560-11634856:1:exon

Thap4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Thap4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THAP domain-containing protein 4 isoform X2
translation: MEPPKLNPVVEPLSWMLGTWLSDPPGVGTFPTLQPFQYLEEVHISHVGQPMLNFSFNSFHPETHKPMHRECGFIRLKPDTNKVAFVSAQNTGIVEVEEGEVNGQELSVSSHSISRISFAKEPHVEQITRKFRLNSEGKLEQTVSMATTTQPMTQHLHITYKKVTP
SIO_010081: Thap4
subclass of: SO_0000673
so part of: Thap4
location: join(11609549..11609552,11616303..11616462,11625333..11625442,11626655..11626758,11634560..11634679)
location: region:11609549-11634679:1
so has part: feature:11609549-11609552:1:exon
so has part: feature:11616303-11616462:1:exon
so has part: feature:11625333-11625442:1:exon
so has part: feature:11626655-11626758:1:exon
so has part: feature:11634560-11634679:1:exon

XP_034377783.1
type: Protein
SIO_000068: ncbiprotein

position:11609549:1
position: 11609549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11609549-11609552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11616303-11616462:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11625333-11625442:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11626655-11626758:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11634560-11634679:1:exon

Bok
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Bok
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11642394..11654167)
location: region:11642394-11654167:-1
so has part: feature:11642394-11654167:-1:exon
subclass of: SO_0000010

117722687
type: Gene
SIO_000068: ncbigene

position:11642394:-1
position: 11642394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11654167:-1
position: 11654167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11642394-11654167:-1:exon

Bok
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Bok
product: BCL2 family apoptosis regulator BOK
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 1 long SRA read, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521950.1
SIO_010081: Bok
subclass of: SO_0000673
so part of: Bok
location: complement(join(11642394..11643131,11643743..11643906,11650448..11650576,11653054..11653305,11653893..11654167))
location: region:11642394-11654167:-1
so has part: feature:11653893-11654167:-1:exon
so has part: feature:11653054-11653305:-1:exon
so has part: feature:11650448-11650576:-1:exon
so has part: feature:11643743-11643906:-1:exon
so has part: feature:11642394-11643131:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11653893-11654167:-1:exon

position:11653893:-1
position: 11653893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11653054-11653305:-1:exon

position:11653054:-1
position: 11653054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11653305:-1
position: 11653305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11650448-11650576:-1:exon

position:11650448:-1
position: 11650448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11650576:-1
position: 11650576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11643743-11643906:-1:exon

position:11643743:-1
position: 11643743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11643906:-1
position: 11643906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11642394-11643131:-1:exon

position:11643131:-1
position: 11643131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Bok
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Bok
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bcl-2-related ovarian killer protein
translation: MEVLRRSSVFAAEIMDAFDRSPTDKELVAQAKALGREYVHARLLRAGLSWSAPERASPAPGGRLAEVCTVLLRLGDELEQIRPSVYRNVARQLHIPLQSEPVVTDAFLAVAGHIFSAGITWGKVVSLYSVAAGLAVDCVRQAQPAMVHALVDCLGEFVRKTLATWLRRRGGWTDVLKCVVSTDPGFRSHWLVATLCSFGRFLKAAFFLLLPER
SIO_010081: Bok
subclass of: SO_0000673
so part of: Bok
location: complement(join(11643006..11643131,11643743..11643906,11650448..11650576,11653054..11653276))
location: region:11643006-11653276:-1
so has part: feature:11653054-11653276:-1:exon
so has part: feature:11650448-11650576:-1:exon
so has part: feature:11643743-11643906:-1:exon
so has part: feature:11643006-11643131:-1:exon

XP_034377841.1
type: Protein
SIO_000068: ncbiprotein

position:11643006:-1
position: 11643006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11653276:-1
position: 11653276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11653054-11653276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11650448-11650576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11643743-11643906:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11643006-11643131:-1:exon

Stk25
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Stk25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11696853..11708500
location: region:11696853-11708500:1
so has part: feature:11696853-11708500:1:exon
subclass of: SO_0000010

117722318
type: Gene
SIO_000068: ncbigene

position:11696853:1
position: 11696853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11708500:1
position: 11708500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11696853-11708500:1:exon

Stk25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Stk25
product: serine/threonine kinase 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 mRNAs, 5 long SRA reads, 22 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521348.1
SIO_010081: Stk25
subclass of: SO_0000673
so part of: Stk25
location: join(11696853..11697062,11697225..11697310,11701448..11701678,11702877..11702933,11703475..11703583,11704404..11704561,11704648..11704833,11705008..11705153,11705458..11705572,11705968..11706039,11707032..11707168,11707889..11708500)
location: region:11696853-11708500:1
so has part: feature:11696853-11697062:1:exon
so has part: feature:11697225-11697310:1:exon
so has part: feature:11701448-11701678:1:exon
so has part: feature:11702877-11702933:1:exon
so has part: feature:11703475-11703583:1:exon
so has part: feature:11704404-11704561:1:exon
so has part: feature:11704648-11704833:1:exon
so has part: feature:11705008-11705153:1:exon
so has part: feature:11705458-11705572:1:exon
so has part: feature:11705968-11706039:1:exon
so has part: feature:11707032-11707168:1:exon
so has part: feature:11707889-11708500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11696853-11697062:1:exon

position:11697062:1
position: 11697062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11697225-11697310:1:exon

position:11697225:1
position: 11697225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11697310:1
position: 11697310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11701448-11701678:1:exon

position:11701448:1
position: 11701448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11701678:1
position: 11701678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11702877-11702933:1:exon

position:11702877:1
position: 11702877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11702933:1
position: 11702933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11703475-11703583:1:exon

position:11703475:1
position: 11703475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11703583:1
position: 11703583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11704404-11704561:1:exon

position:11704404:1
position: 11704404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11704561:1
position: 11704561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11704648-11704833:1:exon

position:11704648:1
position: 11704648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11704833:1
position: 11704833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11705008-11705153:1:exon

position:11705008:1
position: 11705008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11705153:1
position: 11705153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11705458-11705572:1:exon

position:11705458:1
position: 11705458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11705572:1
position: 11705572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11705968-11706039:1:exon

position:11705968:1
position: 11705968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11706039:1
position: 11706039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11707032-11707168:1:exon

position:11707032:1
position: 11707032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11707168:1
position: 11707168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11707889-11708500:1:exon

position:11707889:1
position: 11707889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Stk25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Stk25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 25
translation: MAHLRGFAHQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNNPPTLEGHHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYKRWKSEGHGEESSSEDSDIDGEAEDGEQGPIWTFPPTIRPSPHSKLHKGTALHSSQKPAEPIKRQPRSQCLSTLVRPVFGELKEKHKQSGGSVGALEELENAFSLAEESCPGISDKLMVHLVERVQRFSHSRNHLTSTR
SIO_010081: Stk25
subclass of: SO_0000673
so part of: Stk25
location: join(11697281..11697310,11701448..11701678,11702877..11702933,11703475..11703583,11704404..11704561,11704648..11704833,11705008..11705153,11705458..11705572,11705968..11706039,11707032..11707168,11707889..11707928)
location: region:11697281-11707928:1
so has part: feature:11697281-11697310:1:exon
so has part: feature:11701448-11701678:1:exon
so has part: feature:11702877-11702933:1:exon
so has part: feature:11703475-11703583:1:exon
so has part: feature:11704404-11704561:1:exon
so has part: feature:11704648-11704833:1:exon
so has part: feature:11705008-11705153:1:exon
so has part: feature:11705458-11705572:1:exon
so has part: feature:11705968-11706039:1:exon
so has part: feature:11707032-11707168:1:exon
so has part: feature:11707889-11707928:1:exon

XP_034377239.1
type: Protein
SIO_000068: ncbiprotein

position:11697281:1
position: 11697281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11707928:1
position: 11707928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11697281-11697310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11701448-11701678:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11702877-11702933:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11703475-11703583:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11704404-11704561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11704648-11704833:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11705008-11705153:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11705458-11705572:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11705968-11706039:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11707032-11707168:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11707889-11707928:1:exon

Farp2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Farp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11708582..11816216)
location: region:11708582-11816216:-1
so has part: feature:11708582-11816216:-1:exon
subclass of: SO_0000010

117722317
type: Gene
SIO_000068: ncbigene

position:11708582:-1
position: 11708582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11816216:-1
position: 11816216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11708582-11816216:-1:exon

Farp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Farp2
product: FERM, ARH/RhoGEF and pleckstrin domain protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034521346.1
SIO_010081: Farp2
subclass of: SO_0000673
so part of: Farp2
location: complement(join(11708582..11709356,11709950..11710101,11710361..11710468,11711609..11711766,11712037..11712155,11712863..11712945,11713181..11713201,11716967..11717056,11717703..11717771,11720034..11720164,11722180..11722417,11725152..11725233,11725882..11726015,11726587..11726676,11729989..11730167,11750229..11750487,11752932..11752989,11753818..11753886,11754203..11754366,11755668..11755763,11760385..11760532,11761197..11761311,11762730..11762827,11767982..11768060,11769985..11770027,11770858..11770962,11799852..11800062,11816111..11816170))
location: region:11708582-11816170:-1
so has part: feature:11816111-11816170:-1:exon
so has part: feature:11799852-11800062:-1:exon
so has part: feature:11770858-11770962:-1:exon
so has part: feature:11769985-11770027:-1:exon
so has part: feature:11767982-11768060:-1:exon
so has part: feature:11762730-11762827:-1:exon
so has part: feature:11761197-11761311:-1:exon
so has part: feature:11760385-11760532:-1:exon
so has part: feature:11755668-11755763:-1:exon
so has part: feature:11754203-11754366:-1:exon
so has part: feature:11753818-11753886:-1:exon
so has part: feature:11752932-11752989:-1:exon
so has part: feature:11750229-11750487:-1:exon
so has part: feature:11729989-11730167:-1:exon
so has part: feature:11726587-11726676:-1:exon
so has part: feature:11725882-11726015:-1:exon
so has part: feature:11725152-11725233:-1:exon
so has part: feature:11722180-11722417:-1:exon
so has part: feature:11720034-11720164:-1:exon
so has part: feature:11717703-11717771:-1:exon
so has part: feature:11716967-11717056:-1:exon
so has part: feature:11713181-11713201:-1:exon
so has part: feature:11712863-11712945:-1:exon
so has part: feature:11712037-11712155:-1:exon
so has part: feature:11711609-11711766:-1:exon
so has part: feature:11710361-11710468:-1:exon
so has part: feature:11709950-11710101:-1:exon
so has part: feature:11708582-11709356:-1:exon

position:11816170:-1
position: 11816170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11816111-11816170:-1:exon

position:11816111:-1
position: 11816111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11799852-11800062:-1:exon

position:11799852:-1
position: 11799852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11800062:-1
position: 11800062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11770858-11770962:-1:exon

position:11770858:-1
position: 11770858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11770962:-1
position: 11770962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11769985-11770027:-1:exon

position:11769985:-1
position: 11769985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11770027:-1
position: 11770027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11767982-11768060:-1:exon

position:11767982:-1
position: 11767982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11768060:-1
position: 11768060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11762730-11762827:-1:exon

position:11762730:-1
position: 11762730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11762827:-1
position: 11762827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11761197-11761311:-1:exon

position:11761197:-1
position: 11761197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11761311:-1
position: 11761311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11760385-11760532:-1:exon

position:11760385:-1
position: 11760385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11760532:-1
position: 11760532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11755668-11755763:-1:exon

position:11755668:-1
position: 11755668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11755763:-1
position: 11755763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11754203-11754366:-1:exon

position:11754203:-1
position: 11754203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11754366:-1
position: 11754366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11753818-11753886:-1:exon

position:11753818:-1
position: 11753818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11753886:-1
position: 11753886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11752932-11752989:-1:exon

position:11752932:-1
position: 11752932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11752989:-1
position: 11752989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11750229-11750487:-1:exon

position:11750229:-1
position: 11750229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11750487:-1
position: 11750487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11729989-11730167:-1:exon

position:11729989:-1
position: 11729989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11730167:-1
position: 11730167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11726587-11726676:-1:exon

position:11726587:-1
position: 11726587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11726676:-1
position: 11726676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11725882-11726015:-1:exon

position:11725882:-1
position: 11725882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11726015:-1
position: 11726015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11725152-11725233:-1:exon

position:11725152:-1
position: 11725152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11725233:-1
position: 11725233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11722180-11722417:-1:exon

position:11722180:-1
position: 11722180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11722417:-1
position: 11722417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11720034-11720164:-1:exon

position:11720034:-1
position: 11720034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11720164:-1
position: 11720164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11717703-11717771:-1:exon

position:11717703:-1
position: 11717703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11717771:-1
position: 11717771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11716967-11717056:-1:exon

position:11716967:-1
position: 11716967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11717056:-1
position: 11717056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11713181-11713201:-1:exon

position:11713181:-1
position: 11713181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11713201:-1
position: 11713201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11712863-11712945:-1:exon

position:11712863:-1
position: 11712863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11712945:-1
position: 11712945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:11712037-11712155:-1:exon

position:11712037:-1
position: 11712037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11712155:-1
position: 11712155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:11711609-11711766:-1:exon

position:11711609:-1
position: 11711609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11711766:-1
position: 11711766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:11710361-11710468:-1:exon

position:11710361:-1
position: 11710361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11710468:-1
position: 11710468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:11709950-11710101:-1:exon

position:11709950:-1
position: 11709950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11710101:-1
position: 11710101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:11708582-11709356:-1:exon

position:11709356:-1
position: 11709356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Farp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Farp2
product: FERM, ARH/RhoGEF and pleckstrin domain protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034521347.1
SIO_010081: Farp2
subclass of: SO_0000673
so part of: Farp2
location: complement(join(11708771..11709356,11709950..11710101,11710361..11710468,11711609..11711766,11712037..11712155,11712863..11712945,11716967..11717056,11717703..11717771,11720034..11720164,11722180..11722417,11725152..11725233,11725882..11726015,11726587..11726676,11729989..11730167,11750229..11750487,11752932..11752989,11753818..11753886,11754203..11754366,11755668..11755763,11760385..11760532,11761197..11761311,11762730..11762827,11767982..11768060,11769985..11770027,11770858..11770962,11799852..11800062,11816111..11816216))
location: region:11708771-11816216:-1
so has part: feature:11816111-11816216:-1:exon
so has part: feature:11799852-11800062:-1:exon
so has part: feature:11770858-11770962:-1:exon
so has part: feature:11769985-11770027:-1:exon
so has part: feature:11767982-11768060:-1:exon
so has part: feature:11762730-11762827:-1:exon
so has part: feature:11761197-11761311:-1:exon
so has part: feature:11760385-11760532:-1:exon
so has part: feature:11755668-11755763:-1:exon
so has part: feature:11754203-11754366:-1:exon
so has part: feature:11753818-11753886:-1:exon
so has part: feature:11752932-11752989:-1:exon
so has part: feature:11750229-11750487:-1:exon
so has part: feature:11729989-11730167:-1:exon
so has part: feature:11726587-11726676:-1:exon
so has part: feature:11725882-11726015:-1:exon
so has part: feature:11725152-11725233:-1:exon
so has part: feature:11722180-11722417:-1:exon
so has part: feature:11720034-11720164:-1:exon
so has part: feature:11717703-11717771:-1:exon
so has part: feature:11716967-11717056:-1:exon
so has part: feature:11712863-11712945:-1:exon
so has part: feature:11712037-11712155:-1:exon
so has part: feature:11711609-11711766:-1:exon
so has part: feature:11710361-11710468:-1:exon
so has part: feature:11709950-11710101:-1:exon
so has part: feature:11708771-11709356:-1:exon

position:11708771:-1
position: 11708771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11816111-11816216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11799852-11800062:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11770858-11770962:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11769985-11770027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11767982-11768060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11762730-11762827:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11761197-11761311:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11760385-11760532:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11755668-11755763:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11754203-11754366:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11753818-11753886:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11752932-11752989:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11750229-11750487:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11729989-11730167:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11726587-11726676:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11725882-11726015:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11725152-11725233:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11722180-11722417:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11720034-11720164:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11717703-11717771:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11716967-11717056:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11712863-11712945:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11712037-11712155:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11711609-11711766:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11710361-11710468:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11709950-11710101:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11708771-11709356:-1:exon

Farp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Farp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X2
translation: MGEIEGTYRVLPTSGTRLGGQTSIGVSTLEPEQTLPPRMQEKHMPIRVKLLDSTVELFDIEPKCDGQVLLTQVWKHLNLIECDYFGLEFKNVQSYWIWLEPMKPIIRQVRKPKNVVLHLAVKFFPPDPGQLQEEYTRYLFALQLKRDLLEGRLTCVSTTAALLISHLLQSEIGDYDETLDREHLKANEYLPNQEKCLEKILDFHQRHTGQTPAESDFQVLEIARKLEMYGIRFHMASDREGTKINLAVSHMGVLVFQGTTKINTFNWSKVRKLSFKRKRFLIKLHPEVHGPYQDTLEFLLGSRDECKNFWKICVEYHTFFRLSDQPKPKAKAVFFSRGSSFRYSGRTQKQLVDYVKDGGMKRIPYERRHSKTRTSLHALTVDLPKQSISFTDGLRTSASLSSANVSFYPPPTSSLSPPGLPNLKDSSSSLVDPQAPHMKSTAAERSSRPSSSEGPGTQSAHLSGPPVLQPGPGFSMDSPQPSPSSLKSQLSLSPELQAFLSTAEQGSSPVLSPVLNGAGTARMDNQEEQKHKYMPEDEAYFIAKEILATERTYLKDLEVITVWFRSVVIKEEAMPAALMTLLFSNIDPVYEFHRGFLHEVEQRLTLWEGPSSAHLKGDHQRIGDILLRNMRQLKEFTSYFQRHDEVLTELEKATKHCKKLEAVYKEFELQKVCYLPLNTFLLKPVQRLVHYRLLLSRLCAHYSPGHHDYADCHEALKAITEVTTELQQSLTRLENLQKLTELQRDLVGVENLIAPGREFIREGCLHKLTKKGLQQRMFFLFSDVLLYTSKSVSGASHFRIRGFLPLRGMLVEESENEWSVPHCFTIYAAQKTIVVAASTQLEKEKWMQDLNAAIQAAKSIGDSSPVLLGGPVYTRTPRSSDEVSLEESEDGRGTRGSLEGNNQHRANTTMHVCWYRNTSVSRADHSAAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKTHQDDYPLASLPLLGYSVSLPREADSINKDYVFKLQFKSHIYFFRAESKYTFERWMEVIKRASSSPGRPQSFTQDCSHHSPGLEAEVREKEACPSPCLDKNL
SIO_010081: Farp2
subclass of: SO_0000673
so part of: Farp2
location: complement(join(11709209..11709356,11709950..11710101,11710361..11710468,11711609..11711766,11712037..11712155,11712863..11712945,11716967..11717056,11717703..11717771,11720034..11720164,11722180..11722417,11725152..11725233,11725882..11726015,11726587..11726676,11729989..11730167,11750229..11750487,11752932..11752989,11753818..11753886,11754203..11754366,11755668..11755763,11760385..11760532,11761197..11761311,11762730..11762827,11767982..11768060,11769985..11770027,11770858..11770962,11799852..11800034))
location: region:11709209-11800034:-1
so has part: feature:11799852-11800034:-1:exon
so has part: feature:11770858-11770962:-1:exon
so has part: feature:11769985-11770027:-1:exon
so has part: feature:11767982-11768060:-1:exon
so has part: feature:11762730-11762827:-1:exon
so has part: feature:11761197-11761311:-1:exon
so has part: feature:11760385-11760532:-1:exon
so has part: feature:11755668-11755763:-1:exon
so has part: feature:11754203-11754366:-1:exon
so has part: feature:11753818-11753886:-1:exon
so has part: feature:11752932-11752989:-1:exon
so has part: feature:11750229-11750487:-1:exon
so has part: feature:11729989-11730167:-1:exon
so has part: feature:11726587-11726676:-1:exon
so has part: feature:11725882-11726015:-1:exon
so has part: feature:11725152-11725233:-1:exon
so has part: feature:11722180-11722417:-1:exon
so has part: feature:11720034-11720164:-1:exon
so has part: feature:11717703-11717771:-1:exon
so has part: feature:11716967-11717056:-1:exon
so has part: feature:11712863-11712945:-1:exon
so has part: feature:11712037-11712155:-1:exon
so has part: feature:11711609-11711766:-1:exon
so has part: feature:11710361-11710468:-1:exon
so has part: feature:11709950-11710101:-1:exon
so has part: feature:11709209-11709356:-1:exon

XP_034377238.1
type: Protein
SIO_000068: ncbiprotein

position:11709209:-1
position: 11709209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11800034:-1
position: 11800034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11799852-11800034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11770858-11770962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11769985-11770027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11767982-11768060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11762730-11762827:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11761197-11761311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11760385-11760532:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11755668-11755763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11754203-11754366:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11753818-11753886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11752932-11752989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11750229-11750487:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11729989-11730167:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11726587-11726676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11725882-11726015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11725152-11725233:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11722180-11722417:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11720034-11720164:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11717703-11717771:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11716967-11717056:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11712863-11712945:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11712037-11712155:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11711609-11711766:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11710361-11710468:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11709950-11710101:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11709209-11709356:-1:exon

Farp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Farp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
translation: MGEIEGTYRVLPTSGTRLGGQTSIGVSTLEPEQTLPPRMQEKHMPIRVKLLDSTVELFDIEPKCDGQVLLTQVWKHLNLIECDYFGLEFKNVQSYWIWLEPMKPIIRQVRKPKNVVLHLAVKFFPPDPGQLQEEYTRYLFALQLKRDLLEGRLTCVSTTAALLISHLLQSEIGDYDETLDREHLKANEYLPNQEKCLEKILDFHQRHTGQTPAESDFQVLEIARKLEMYGIRFHMASDREGTKINLAVSHMGVLVFQGTTKINTFNWSKVRKLSFKRKRFLIKLHPEVHGPYQDTLEFLLGSRDECKNFWKICVEYHTFFRLSDQPKPKAKAVFFSRGSSFRYSGRTQKQLVDYVKDGGMKRIPYERRHSKTRTSLHALTVDLPKQSISFTDGLRTSASLSSANVSFYPPPTSSLSPPGLPNLKDSSSSLVDPQAPHMKSTAAERSSRPSSSEGPGTQSAHLSGPPVLQPGPGFSMDSPQPSPSSLKSQLSLSPELQAFLSTAEQGSSPVLSPVLNGAGTARMDNQEEQKHKYMPEDEAYFIAKEILATERTYLKDLEVITVWFRSVVIKEEAMPAALMTLLFSNIDPVYEFHRGFLHEVEQRLTLWEGPSSAHLKGDHQRIGDILLRNMRQLKEFTSYFQRHDEVLTELEKATKHCKKLEAVYKEFELQKVCYLPLNTFLLKPVQRLVHYRLLLSRLCAHYSPGHHDYADCHEALKAITEVTTELQQSLTRLENLQKLTELQRDLVGVENLIAPGREFIREGCLHKLTKKGLQQRMFFLFSDVLLYTSKSVSGASHFRIRGFLPLRGMLLIVLDPPVEESENEWSVPHCFTIYAAQKTIVVAASTQLEKEKWMQDLNAAIQAAKSIGDSSPVLLGGPVYTRTPRSSDEVSLEESEDGRGTRGSLEGNNQHRANTTMHVCWYRNTSVSRADHSAAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKTHQDDYPLASLPLLGYSVSLPREADSINKDYVFKLQFKSHIYFFRAESKYTFERWMEVIKRASSSPGRPQSFTQDCSHHSPGLEAEVREKEACPSPCLDKNL
SIO_010081: Farp2
subclass of: SO_0000673
so part of: Farp2
location: complement(join(11709209..11709356,11709950..11710101,11710361..11710468,11711609..11711766,11712037..11712155,11712863..11712945,11713181..11713201,11716967..11717056,11717703..11717771,11720034..11720164,11722180..11722417,11725152..11725233,11725882..11726015,11726587..11726676,11729989..11730167,11750229..11750487,11752932..11752989,11753818..11753886,11754203..11754366,11755668..11755763,11760385..11760532,11761197..11761311,11762730..11762827,11767982..11768060,11769985..11770027,11770858..11770962,11799852..11800034))
location: region:11709209-11800034:-1
so has part: feature:11799852-11800034:-1:exon
so has part: feature:11770858-11770962:-1:exon
so has part: feature:11769985-11770027:-1:exon
so has part: feature:11767982-11768060:-1:exon
so has part: feature:11762730-11762827:-1:exon
so has part: feature:11761197-11761311:-1:exon
so has part: feature:11760385-11760532:-1:exon
so has part: feature:11755668-11755763:-1:exon
so has part: feature:11754203-11754366:-1:exon
so has part: feature:11753818-11753886:-1:exon
so has part: feature:11752932-11752989:-1:exon
so has part: feature:11750229-11750487:-1:exon
so has part: feature:11729989-11730167:-1:exon
so has part: feature:11726587-11726676:-1:exon
so has part: feature:11725882-11726015:-1:exon
so has part: feature:11725152-11725233:-1:exon
so has part: feature:11722180-11722417:-1:exon
so has part: feature:11720034-11720164:-1:exon
so has part: feature:11717703-11717771:-1:exon
so has part: feature:11716967-11717056:-1:exon
so has part: feature:11713181-11713201:-1:exon
so has part: feature:11712863-11712945:-1:exon
so has part: feature:11712037-11712155:-1:exon
so has part: feature:11711609-11711766:-1:exon
so has part: feature:11710361-11710468:-1:exon
so has part: feature:11709950-11710101:-1:exon
so has part: feature:11709209-11709356:-1:exon

XP_034377237.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11799852-11800034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11770858-11770962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11769985-11770027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11767982-11768060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11762730-11762827:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11761197-11761311:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11760385-11760532:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11755668-11755763:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11754203-11754366:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11753818-11753886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11752932-11752989:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11750229-11750487:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11729989-11730167:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11726587-11726676:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11725882-11726015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11725152-11725233:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11722180-11722417:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11720034-11720164:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11717703-11717771:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11716967-11717056:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11713181-11713201:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11712863-11712945:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11712037-11712155:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11711609-11711766:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11710361-11710468:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11709950-11710101:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11709209-11709356:-1:exon

LOC117722817
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117722817
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(11763956..11764057)
location: region:11763956-11764057:-1
so has part: feature:11763956-11764057:-1:exon
subclass of: SO_0000623

117722817
type: Gene
SIO_000068: ncbigene

position:11763956:-1
position: 11763956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11764057:-1
position: 11764057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11763956-11764057:-1:exon

LOC117722817
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117722817
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608585.1
SIO_010081: LOC117722817
subclass of: SO_0000673
so part of: LOC117722817
location: complement(11763956..11764057)
location: region:11763956-11764057:-1
so has part: feature:11763956-11764057:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11763956-11764057:-1:exon

Septin2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Septin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11818414..11852406)
location: region:11818414-11852406:-1
so has part: feature:11818414-11852406:-1:exon
subclass of: SO_0000010

117722319
type: Gene
SIO_000068: ncbigene

position:11818414:-1
position: 11818414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11852406:-1
position: 11852406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11818414-11852406:-1:exon

Septin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Septin2
product: septin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 7 long SRA reads, 58 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521353.1
SIO_010081: Septin2
subclass of: SO_0000673
so part of: Septin2
location: complement(join(11818414..11820416,11821019..11821138,11822745..11822802,11825059..11825142,11827101..11827246,11827969..11828070,11829812..11829929,11830055..11830189,11831226..11831349,11832718..11832804,11839541..11839661,11841888..11841918,11852075..11852406))
location: region:11818414-11852406:-1
so has part: feature:11852075-11852406:-1:exon
so has part: feature:11841888-11841918:-1:exon
so has part: feature:11839541-11839661:-1:exon
so has part: feature:11832718-11832804:-1:exon
so has part: feature:11831226-11831349:-1:exon
so has part: feature:11830055-11830189:-1:exon
so has part: feature:11829812-11829929:-1:exon
so has part: feature:11827969-11828070:-1:exon
so has part: feature:11827101-11827246:-1:exon
so has part: feature:11825059-11825142:-1:exon
so has part: feature:11822745-11822802:-1:exon
so has part: feature:11821019-11821138:-1:exon
so has part: feature:11818414-11820416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11852075-11852406:-1:exon

position:11852075:-1
position: 11852075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11841888-11841918:-1:exon

position:11841888:-1
position: 11841888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11841918:-1
position: 11841918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11839541-11839661:-1:exon

position:11839541:-1
position: 11839541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11839661:-1
position: 11839661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11832718-11832804:-1:exon

position:11832718:-1
position: 11832718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11832804:-1
position: 11832804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11831226-11831349:-1:exon

position:11831226:-1
position: 11831226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11831349:-1
position: 11831349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11830055-11830189:-1:exon

position:11830055:-1
position: 11830055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11830189:-1
position: 11830189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11829812-11829929:-1:exon

position:11829812:-1
position: 11829812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11829929:-1
position: 11829929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11827969-11828070:-1:exon

position:11827969:-1
position: 11827969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11828070:-1
position: 11828070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11827101-11827246:-1:exon

position:11827101:-1
position: 11827101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11827246:-1
position: 11827246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11825059-11825142:-1:exon

position:11825059:-1
position: 11825059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11825142:-1
position: 11825142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11822745-11822802:-1:exon

position:11822745:-1
position: 11822745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11822802:-1
position: 11822802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11821019-11821138:-1:exon

position:11821019:-1
position: 11821019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11821138:-1
position: 11821138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11818414-11820416:-1:exon

position:11820416:-1
position: 11820416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Septin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Septin2
product: septin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 9 long SRA reads, 60 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521349.1
SIO_010081: Septin2
subclass of: SO_0000673
so part of: Septin2
location: complement(join(11818414..11820416,11821019..11821138,11822745..11822802,11825059..11825142,11827101..11827246,11827969..11828070,11829812..11829929,11830055..11830189,11831226..11831349,11832718..11832804,11839541..11839661,11841888..11841918,11851762..11851841))
location: region:11818414-11851841:-1
so has part: feature:11851762-11851841:-1:exon
so has part: feature:11841888-11841918:-1:exon
so has part: feature:11839541-11839661:-1:exon
so has part: feature:11832718-11832804:-1:exon
so has part: feature:11831226-11831349:-1:exon
so has part: feature:11830055-11830189:-1:exon
so has part: feature:11829812-11829929:-1:exon
so has part: feature:11827969-11828070:-1:exon
so has part: feature:11827101-11827246:-1:exon
so has part: feature:11825059-11825142:-1:exon
so has part: feature:11822745-11822802:-1:exon
so has part: feature:11821019-11821138:-1:exon
so has part: feature:11818414-11820416:-1:exon

position:11851841:-1
position: 11851841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11851762-11851841:-1:exon

position:11851762:-1
position: 11851762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11841888-11841918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11839541-11839661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11832718-11832804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11831226-11831349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11830055-11830189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11829812-11829929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11827969-11828070:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11827101-11827246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11825059-11825142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11822745-11822802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11821019-11821138:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11818414-11820416:-1:exon

Septin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Septin2
product: septin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 8 long SRA reads, 58 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034521350.1
SIO_010081: Septin2
subclass of: SO_0000673
so part of: Septin2
location: complement(join(11818414..11820416,11821019..11821138,11822745..11822802,11825059..11825142,11827101..11827246,11827969..11828070,11829812..11829929,11830055..11830189,11831226..11831349,11832718..11832804,11839541..11839661,11841888..11841918,11851650..11851774))
location: region:11818414-11851774:-1
so has part: feature:11851650-11851774:-1:exon
so has part: feature:11841888-11841918:-1:exon
so has part: feature:11839541-11839661:-1:exon
so has part: feature:11832718-11832804:-1:exon
so has part: feature:11831226-11831349:-1:exon
so has part: feature:11830055-11830189:-1:exon
so has part: feature:11829812-11829929:-1:exon
so has part: feature:11827969-11828070:-1:exon
so has part: feature:11827101-11827246:-1:exon
so has part: feature:11825059-11825142:-1:exon
so has part: feature:11822745-11822802:-1:exon
so has part: feature:11821019-11821138:-1:exon
so has part: feature:11818414-11820416:-1:exon

position:11851774:-1
position: 11851774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11851650-11851774:-1:exon

position:11851650:-1
position: 11851650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11841888-11841918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11839541-11839661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11832718-11832804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11831226-11831349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11830055-11830189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11829812-11829929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11827969-11828070:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11827101-11827246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11825059-11825142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11822745-11822802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11821019-11821138:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11818414-11820416:-1:exon

Septin2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Septin2
product: septin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 7 long SRA reads, 58 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034521351.1
SIO_010081: Septin2
subclass of: SO_0000673
so part of: Septin2
location: complement(join(11818414..11820416,11821019..11821138,11822745..11822802,11825059..11825142,11827101..11827246,11827969..11828070,11829812..11829929,11830055..11830189,11831226..11831349,11832718..11832804,11839541..11839661,11841888..11841918,11851400..11851651))
location: region:11818414-11851651:-1
so has part: feature:11851400-11851651:-1:exon
so has part: feature:11841888-11841918:-1:exon
so has part: feature:11839541-11839661:-1:exon
so has part: feature:11832718-11832804:-1:exon
so has part: feature:11831226-11831349:-1:exon
so has part: feature:11830055-11830189:-1:exon
so has part: feature:11829812-11829929:-1:exon
so has part: feature:11827969-11828070:-1:exon
so has part: feature:11827101-11827246:-1:exon
so has part: feature:11825059-11825142:-1:exon
so has part: feature:11822745-11822802:-1:exon
so has part: feature:11821019-11821138:-1:exon
so has part: feature:11818414-11820416:-1:exon

position:11851651:-1
position: 11851651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11851400-11851651:-1:exon

position:11851400:-1
position: 11851400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11841888-11841918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11839541-11839661:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11832718-11832804:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11831226-11831349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11830055-11830189:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11829812-11829929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11827969-11828070:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11827101-11827246:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11825059-11825142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11822745-11822802:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11821019-11821138:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11818414-11820416:-1:exon

Septin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Septin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2
translation: MSKQQPTQFINPETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLITHMQDLQEVTQDLHYENFRSERLKRGGRKVENEDMNKDQILLEKEAELRRMQEMIARMQAQMQMQMQGGDSDSGTLGHHV
SIO_010081: Septin2
subclass of: SO_0000673
so part of: Septin2
location: complement(join(11821037..11821138,11822745..11822802,11825059..11825142,11827101..11827246,11827969..11828070,11829812..11829929,11830055..11830189,11831226..11831349,11832718..11832804,11839541..11839661,11841888..11841896))
location: region:11821037-11841896:-1
so has part: feature:11841888-11841896:-1:exon
so has part: feature:11839541-11839661:-1:exon
so has part: feature:11832718-11832804:-1:exon
so has part: feature:11831226-11831349:-1:exon
so has part: feature:11830055-11830189:-1:exon
so has part: feature:11829812-11829929:-1:exon
so has part: feature:11827969-11828070:-1:exon
so has part: feature:11827101-11827246:-1:exon
so has part: feature:11825059-11825142:-1:exon
so has part: feature:11822745-11822802:-1:exon
so has part: feature:11821037-11821138:-1:exon

XP_034377240.1
type: Protein
SIO_000068: ncbiprotein

position:11821037:-1
position: 11821037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11841896:-1
position: 11841896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11841888-11841896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11839541-11839661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11832718-11832804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11831226-11831349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11830055-11830189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11829812-11829929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11827969-11828070:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11827101-11827246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11825059-11825142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11822745-11822802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11821037-11821138:-1:exon

Septin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Septin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2
translation: MSKQQPTQFINPETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLITHMQDLQEVTQDLHYENFRSERLKRGGRKVENEDMNKDQILLEKEAELRRMQEMIARMQAQMQMQMQGGDSDSGTLGHHV
SIO_010081: Septin2
subclass of: SO_0000673
so part of: Septin2
location: complement(join(11821037..11821138,11822745..11822802,11825059..11825142,11827101..11827246,11827969..11828070,11829812..11829929,11830055..11830189,11831226..11831349,11832718..11832804,11839541..11839661,11841888..11841896))
location: region:11821037-11841896:-1
so has part: feature:11841888-11841896:-1:exon
so has part: feature:11839541-11839661:-1:exon
so has part: feature:11832718-11832804:-1:exon
so has part: feature:11831226-11831349:-1:exon
so has part: feature:11830055-11830189:-1:exon
so has part: feature:11829812-11829929:-1:exon
so has part: feature:11827969-11828070:-1:exon
so has part: feature:11827101-11827246:-1:exon
so has part: feature:11825059-11825142:-1:exon
so has part: feature:11822745-11822802:-1:exon
so has part: feature:11821037-11821138:-1:exon

XP_034377241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11841888-11841896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11839541-11839661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11832718-11832804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11831226-11831349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11830055-11830189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11829812-11829929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11827969-11828070:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11827101-11827246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11825059-11825142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11822745-11822802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11821037-11821138:-1:exon

Septin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Septin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2
translation: MSKQQPTQFINPETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLITHMQDLQEVTQDLHYENFRSERLKRGGRKVENEDMNKDQILLEKEAELRRMQEMIARMQAQMQMQMQGGDSDSGTLGHHV
SIO_010081: Septin2
subclass of: SO_0000673
so part of: Septin2
location: complement(join(11821037..11821138,11822745..11822802,11825059..11825142,11827101..11827246,11827969..11828070,11829812..11829929,11830055..11830189,11831226..11831349,11832718..11832804,11839541..11839661,11841888..11841896))
location: region:11821037-11841896:-1
so has part: feature:11841888-11841896:-1:exon
so has part: feature:11839541-11839661:-1:exon
so has part: feature:11832718-11832804:-1:exon
so has part: feature:11831226-11831349:-1:exon
so has part: feature:11830055-11830189:-1:exon
so has part: feature:11829812-11829929:-1:exon
so has part: feature:11827969-11828070:-1:exon
so has part: feature:11827101-11827246:-1:exon
so has part: feature:11825059-11825142:-1:exon
so has part: feature:11822745-11822802:-1:exon
so has part: feature:11821037-11821138:-1:exon

XP_034377242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11841888-11841896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11839541-11839661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11832718-11832804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11831226-11831349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11830055-11830189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11829812-11829929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11827969-11828070:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11827101-11827246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11825059-11825142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11822745-11822802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11821037-11821138:-1:exon

Septin2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Septin2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2
translation: MSKQQPTQFINPETPGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHSIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLITHMQDLQEVTQDLHYENFRSERLKRGGRKVENEDMNKDQILLEKEAELRRMQEMIARMQAQMQMQMQGGDSDSGTLGHHV
SIO_010081: Septin2
subclass of: SO_0000673
so part of: Septin2
location: complement(join(11821037..11821138,11822745..11822802,11825059..11825142,11827101..11827246,11827969..11828070,11829812..11829929,11830055..11830189,11831226..11831349,11832718..11832804,11839541..11839661,11841888..11841896))
location: region:11821037-11841896:-1
so has part: feature:11841888-11841896:-1:exon
so has part: feature:11839541-11839661:-1:exon
so has part: feature:11832718-11832804:-1:exon
so has part: feature:11831226-11831349:-1:exon
so has part: feature:11830055-11830189:-1:exon
so has part: feature:11829812-11829929:-1:exon
so has part: feature:11827969-11828070:-1:exon
so has part: feature:11827101-11827246:-1:exon
so has part: feature:11825059-11825142:-1:exon
so has part: feature:11822745-11822802:-1:exon
so has part: feature:11821037-11821138:-1:exon

XP_034377244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11841888-11841896:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11839541-11839661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11832718-11832804:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11831226-11831349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11830055-11830189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11829812-11829929:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11827969-11828070:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11827101-11827246:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11825059-11825142:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11822745-11822802:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11821037-11821138:-1:exon

Hdlbp
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Hdlbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11851860..11926956
location: region:11851860-11926956:1
so has part: feature:11851860-11926956:1:exon
subclass of: SO_0000010

117722316
type: Gene
SIO_000068: ncbigene

position:11851860:1
position: 11851860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11926956:1
position: 11926956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11851860-11926956:1:exon

Hdlbp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Hdlbp
product: high density lipoprotein binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 22 long SRA reads, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034521345.1
SIO_010081: Hdlbp
subclass of: SO_0000673
so part of: Hdlbp
location: join(11851860..11852115,11891863..11891927,11893309..11893421,11895587..11895744,11896781..11896996,11902529..11902735,11902881..11903096,11903688..11903894,11904564..11904671,11905843..11905947,11906434..11906512,11908466..11908605,11910024..11910128,11910563..11910676,11911768..11911854,11911985..11912116,11912931..11913149,11915476..11915697,11915768..11915986,11916502..11916640,11918215..11918369,11919263..11919367,11919588..11919722,11920600..11920743,11923655..11923840,11924017..11924133,11924324..11924452,11924590..11926956)
location: region:11851860-11926956:1
so has part: feature:11851860-11852115:1:exon
so has part: feature:11891863-11891927:1:exon
so has part: feature:11893309-11893421:1:exon
so has part: feature:11895587-11895744:1:exon
so has part: feature:11896781-11896996:1:exon
so has part: feature:11902529-11902735:1:exon
so has part: feature:11902881-11903096:1:exon
so has part: feature:11903688-11903894:1:exon
so has part: feature:11904564-11904671:1:exon
so has part: feature:11905843-11905947:1:exon
so has part: feature:11906434-11906512:1:exon
so has part: feature:11908466-11908605:1:exon
so has part: feature:11910024-11910128:1:exon
so has part: feature:11910563-11910676:1:exon
so has part: feature:11911768-11911854:1:exon
so has part: feature:11911985-11912116:1:exon
so has part: feature:11912931-11913149:1:exon
so has part: feature:11915476-11915697:1:exon
so has part: feature:11915768-11915986:1:exon
so has part: feature:11916502-11916640:1:exon
so has part: feature:11918215-11918369:1:exon
so has part: feature:11919263-11919367:1:exon
so has part: feature:11919588-11919722:1:exon
so has part: feature:11920600-11920743:1:exon
so has part: feature:11923655-11923840:1:exon
so has part: feature:11924017-11924133:1:exon
so has part: feature:11924324-11924452:1:exon
so has part: feature:11924590-11926956:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11851860-11852115:1:exon

position:11852115:1
position: 11852115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11891863-11891927:1:exon

position:11891863:1
position: 11891863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11891927:1
position: 11891927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11893309-11893421:1:exon

position:11893309:1
position: 11893309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11893421:1
position: 11893421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11895587-11895744:1:exon

position:11895587:1
position: 11895587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11895744:1
position: 11895744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11896781-11896996:1:exon

position:11896781:1
position: 11896781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11896996:1
position: 11896996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11902529-11902735:1:exon

position:11902529:1
position: 11902529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11902735:1
position: 11902735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11902881-11903096:1:exon

position:11902881:1
position: 11902881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11903096:1
position: 11903096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11903688-11903894:1:exon

position:11903688:1
position: 11903688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11903894:1
position: 11903894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11904564-11904671:1:exon

position:11904564:1
position: 11904564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11904671:1
position: 11904671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11905843-11905947:1:exon

position:11905843:1
position: 11905843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11905947:1
position: 11905947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11906434-11906512:1:exon

position:11906434:1
position: 11906434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11906512:1
position: 11906512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11908466-11908605:1:exon

position:11908466:1
position: 11908466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11908605:1
position: 11908605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11910024-11910128:1:exon

position:11910024:1
position: 11910024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11910128:1
position: 11910128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11910563-11910676:1:exon

position:11910563:1
position: 11910563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11910676:1
position: 11910676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11911768-11911854:1:exon

position:11911768:1
position: 11911768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11911854:1
position: 11911854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11911985-11912116:1:exon

position:11911985:1
position: 11911985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11912116:1
position: 11912116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11912931-11913149:1:exon

position:11912931:1
position: 11912931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11913149:1
position: 11913149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11915476-11915697:1:exon

position:11915476:1
position: 11915476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11915697:1
position: 11915697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11915768-11915986:1:exon

position:11915768:1
position: 11915768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11915986:1
position: 11915986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11916502-11916640:1:exon

position:11916502:1
position: 11916502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11916640:1
position: 11916640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11918215-11918369:1:exon

position:11918215:1
position: 11918215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11918369:1
position: 11918369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11919263-11919367:1:exon

position:11919263:1
position: 11919263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11919367:1
position: 11919367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11919588-11919722:1:exon

position:11919588:1
position: 11919588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11919722:1
position: 11919722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:11920600-11920743:1:exon

position:11920600:1
position: 11920600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11920743:1
position: 11920743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:11923655-11923840:1:exon

position:11923655:1
position: 11923655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11923840:1
position: 11923840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:11924017-11924133:1:exon

position:11924017:1
position: 11924017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11924133:1
position: 11924133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:11924324-11924452:1:exon

position:11924324:1
position: 11924324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11924452:1
position: 11924452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:11924590-11926956:1:exon

position:11924590:1
position: 11924590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hdlbp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Hdlbp
product: high density lipoprotein binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 17 long SRA reads, 15 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034521344.1
SIO_010081: Hdlbp
subclass of: SO_0000673
so part of: Hdlbp
location: join(11888436..11888557,11891863..11891927,11893309..11893421,11895587..11895744,11896781..11896996,11902529..11902735,11902881..11903096,11903688..11903894,11904564..11904671,11905843..11905947,11906434..11906512,11908466..11908605,11910024..11910128,11910563..11910676,11911768..11911854,11911985..11912116,11912931..11913149,11915476..11915697,11915768..11915986,11916502..11916640,11918215..11918369,11919263..11919367,11919588..11919722,11920600..11920743,11923655..11923840,11924017..11924133,11924324..11924452,11924590..11926956)
location: region:11888436-11926956:1
so has part: feature:11888436-11888557:1:exon
so has part: feature:11891863-11891927:1:exon
so has part: feature:11893309-11893421:1:exon
so has part: feature:11895587-11895744:1:exon
so has part: feature:11896781-11896996:1:exon
so has part: feature:11902529-11902735:1:exon
so has part: feature:11902881-11903096:1:exon
so has part: feature:11903688-11903894:1:exon
so has part: feature:11904564-11904671:1:exon
so has part: feature:11905843-11905947:1:exon
so has part: feature:11906434-11906512:1:exon
so has part: feature:11908466-11908605:1:exon
so has part: feature:11910024-11910128:1:exon
so has part: feature:11910563-11910676:1:exon
so has part: feature:11911768-11911854:1:exon
so has part: feature:11911985-11912116:1:exon
so has part: feature:11912931-11913149:1:exon
so has part: feature:11915476-11915697:1:exon
so has part: feature:11915768-11915986:1:exon
so has part: feature:11916502-11916640:1:exon
so has part: feature:11918215-11918369:1:exon
so has part: feature:11919263-11919367:1:exon
so has part: feature:11919588-11919722:1:exon
so has part: feature:11920600-11920743:1:exon
so has part: feature:11923655-11923840:1:exon
so has part: feature:11924017-11924133:1:exon
so has part: feature:11924324-11924452:1:exon
so has part: feature:11924590-11926956:1:exon

position:11888436:1
position: 11888436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11888436-11888557:1:exon

position:11888557:1
position: 11888557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11891863-11891927:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11893309-11893421:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11895587-11895744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11896781-11896996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11902529-11902735:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11902881-11903096:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11903688-11903894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11904564-11904671:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11905843-11905947:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11906434-11906512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11908466-11908605:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11910024-11910128:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11910563-11910676:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11911768-11911854:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11911985-11912116:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11912931-11913149:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11915476-11915697:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11915768-11915986:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11916502-11916640:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11918215-11918369:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11919263-11919367:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11919588-11919722:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11920600-11920743:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11923655-11923840:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11924017-11924133:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11924324-11924452:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11924590-11926956:1:exon

Hdlbp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Hdlbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vigilin
translation: MSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPAGAWSNKIRPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVPIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVSAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIVITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARIIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDYMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTVECAIPQKFHRSVMGPKGSRIQQITRDYNVQIKFPDREENPVHSVEPSIQENGDEAGEGREAKETDPGSPRRCDIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYIIGQKGSGIRKMMDEFEVNIHVPAPELQSDTIAITGLAANLDRAKAGLLDRVKELQAEQEDRALRSFKLNVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILKIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDSEALQVYMKPPAHEESKAPSKGFVVRDAPWTSSSSEKAPDMSSSEEFPSFGAQVAPKTLPWGPKR
SIO_010081: Hdlbp
subclass of: SO_0000673
so part of: Hdlbp
location: join(11893346..11893421,11895587..11895744,11896781..11896996,11902529..11902735,11902881..11903096,11903688..11903894,11904564..11904671,11905843..11905947,11906434..11906512,11908466..11908605,11910024..11910128,11910563..11910676,11911768..11911854,11911985..11912116,11912931..11913149,11915476..11915697,11915768..11915986,11916502..11916640,11918215..11918369,11919263..11919367,11919588..11919722,11920600..11920743,11923655..11923840,11924017..11924133,11924324..11924452,11924590..11924676)
location: region:11893346-11924676:1
so has part: feature:11893346-11893421:1:exon
so has part: feature:11895587-11895744:1:exon
so has part: feature:11896781-11896996:1:exon
so has part: feature:11902529-11902735:1:exon
so has part: feature:11902881-11903096:1:exon
so has part: feature:11903688-11903894:1:exon
so has part: feature:11904564-11904671:1:exon
so has part: feature:11905843-11905947:1:exon
so has part: feature:11906434-11906512:1:exon
so has part: feature:11908466-11908605:1:exon
so has part: feature:11910024-11910128:1:exon
so has part: feature:11910563-11910676:1:exon
so has part: feature:11911768-11911854:1:exon
so has part: feature:11911985-11912116:1:exon
so has part: feature:11912931-11913149:1:exon
so has part: feature:11915476-11915697:1:exon
so has part: feature:11915768-11915986:1:exon
so has part: feature:11916502-11916640:1:exon
so has part: feature:11918215-11918369:1:exon
so has part: feature:11919263-11919367:1:exon
so has part: feature:11919588-11919722:1:exon
so has part: feature:11920600-11920743:1:exon
so has part: feature:11923655-11923840:1:exon
so has part: feature:11924017-11924133:1:exon
so has part: feature:11924324-11924452:1:exon
so has part: feature:11924590-11924676:1:exon

XP_034377235.1
type: Protein
SIO_000068: ncbiprotein

position:11893346:1
position: 11893346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11924676:1
position: 11924676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11893346-11893421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11895587-11895744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11896781-11896996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11902529-11902735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11902881-11903096:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11903688-11903894:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11904564-11904671:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11905843-11905947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11906434-11906512:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11908466-11908605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11910024-11910128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11910563-11910676:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11911768-11911854:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11911985-11912116:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11912931-11913149:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11915476-11915697:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11915768-11915986:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11916502-11916640:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11918215-11918369:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11919263-11919367:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11919588-11919722:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11920600-11920743:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11923655-11923840:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11924017-11924133:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11924324-11924452:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11924590-11924676:1:exon

Hdlbp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Hdlbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vigilin
translation: MSSVAVLTQESFAEHRSGLVPQQIKVATLNSEEESDPPTYKDAFPPLPEKAACLESAQEPAGAWSNKIRPIKASVITQVFHVPLEERKYKDMNQFGEGEQAKICLEIMQRTGAHLELSLAKDQGLSIMVSGKLDAVMKARKDIVARLQTQASATVPIPKEHHRFVIGKNGEKLQDLELKTATKIQIPRPDDPSNQIKITGTKEGIEKARHEVLLISAEQDKRAVERLEVEKAFHPFIAGPYNRLVGEIMQETGTRINIPPPSVNRTEIVFTGEKEQLAQAVARIKKIYEEKKKKTTTIAVEVKKSQHKYVIGPKGNSLQEILERTGVSVEIPPSDSISETVILRGEPEKLGQALTEVYAKANSFTVSSVSAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTEDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIPPDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERIREIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPIFKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIVITGKRANCEAARSRILSIQKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRGPSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARIIFPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDYMLVDPKHHRHFVIRRGQVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTVECAIPQKFHRSVMGPKGSRIQQITRDYNVQIKFPDREENPVHSVEPSIQENGDEAGEGREAKETDPGSPRRCDIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYIIGQKGSGIRKMMDEFEVNIHVPAPELQSDTIAITGLAANLDRAKAGLLDRVKELQAEQEDRALRSFKLNVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNTEAARDAILKIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGAPDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDSEALQVYMKPPAHEESKAPSKGFVVRDAPWTSSSSEKAPDMSSSEEFPSFGAQVAPKTLPWGPKR
SIO_010081: Hdlbp
subclass of: SO_0000673
so part of: Hdlbp
location: join(11893346..11893421,11895587..11895744,11896781..11896996,11902529..11902735,11902881..11903096,11903688..11903894,11904564..11904671,11905843..11905947,11906434..11906512,11908466..11908605,11910024..11910128,11910563..11910676,11911768..11911854,11911985..11912116,11912931..11913149,11915476..11915697,11915768..11915986,11916502..11916640,11918215..11918369,11919263..11919367,11919588..11919722,11920600..11920743,11923655..11923840,11924017..11924133,11924324..11924452,11924590..11924676)
location: region:11893346-11924676:1
so has part: feature:11893346-11893421:1:exon
so has part: feature:11895587-11895744:1:exon
so has part: feature:11896781-11896996:1:exon
so has part: feature:11902529-11902735:1:exon
so has part: feature:11902881-11903096:1:exon
so has part: feature:11903688-11903894:1:exon
so has part: feature:11904564-11904671:1:exon
so has part: feature:11905843-11905947:1:exon
so has part: feature:11906434-11906512:1:exon
so has part: feature:11908466-11908605:1:exon
so has part: feature:11910024-11910128:1:exon
so has part: feature:11910563-11910676:1:exon
so has part: feature:11911768-11911854:1:exon
so has part: feature:11911985-11912116:1:exon
so has part: feature:11912931-11913149:1:exon
so has part: feature:11915476-11915697:1:exon
so has part: feature:11915768-11915986:1:exon
so has part: feature:11916502-11916640:1:exon
so has part: feature:11918215-11918369:1:exon
so has part: feature:11919263-11919367:1:exon
so has part: feature:11919588-11919722:1:exon
so has part: feature:11920600-11920743:1:exon
so has part: feature:11923655-11923840:1:exon
so has part: feature:11924017-11924133:1:exon
so has part: feature:11924324-11924452:1:exon
so has part: feature:11924590-11924676:1:exon

XP_034377236.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11893346-11893421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11895587-11895744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11896781-11896996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11902529-11902735:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11902881-11903096:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11903688-11903894:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11904564-11904671:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11905843-11905947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11906434-11906512:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11908466-11908605:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11910024-11910128:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11910563-11910676:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11911768-11911854:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11911985-11912116:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11912931-11913149:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11915476-11915697:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11915768-11915986:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11916502-11916640:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11918215-11918369:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11919263-11919367:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11919588-11919722:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11920600-11920743:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11923655-11923840:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11924017-11924133:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11924324-11924452:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11924590-11924676:1:exon

Ano7
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ano7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11928583..11955542)
location: region:11928583-11955542:-1
so has part: feature:11928583-11955542:-1:exon
subclass of: SO_0000010

117722414
type: Gene
SIO_000068: ncbigene

position:11928583:-1
position: 11928583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11955542:-1
position: 11955542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11928583-11955542:-1:exon

Ano7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ano7
product: anoctamin 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034521553.1
SIO_010081: Ano7
subclass of: SO_0000673
so part of: Ano7
location: complement(join(11928583..11929760,11930065..11930184,11930592..11930682,11930912..11931054,11931140..11931345,11932224..11932357,11933481..11933578,11934992..11935046,11935293..11935404,11937049..11937151,11937230..11937328,11937902..11938039,11938106..11938249,11939768..11939864,11940547..11940637,11941781..11941946,11943344..11943454,11944566..11944623,11946521..11946657,11947309..11947416,11951304..11951434,11952639..11952696,11954227..11954341,11955393..11955542))
location: region:11928583-11955542:-1
so has part: feature:11955393-11955542:-1:exon
so has part: feature:11954227-11954341:-1:exon
so has part: feature:11952639-11952696:-1:exon
so has part: feature:11951304-11951434:-1:exon
so has part: feature:11947309-11947416:-1:exon
so has part: feature:11946521-11946657:-1:exon
so has part: feature:11944566-11944623:-1:exon
so has part: feature:11943344-11943454:-1:exon
so has part: feature:11941781-11941946:-1:exon
so has part: feature:11940547-11940637:-1:exon
so has part: feature:11939768-11939864:-1:exon
so has part: feature:11938106-11938249:-1:exon
so has part: feature:11937902-11938039:-1:exon
so has part: feature:11937230-11937328:-1:exon
so has part: feature:11937049-11937151:-1:exon
so has part: feature:11935293-11935404:-1:exon
so has part: feature:11934992-11935046:-1:exon
so has part: feature:11933481-11933578:-1:exon
so has part: feature:11932224-11932357:-1:exon
so has part: feature:11931140-11931345:-1:exon
so has part: feature:11930912-11931054:-1:exon
so has part: feature:11930592-11930682:-1:exon
so has part: feature:11930065-11930184:-1:exon
so has part: feature:11928583-11929760:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11955393-11955542:-1:exon

position:11955393:-1
position: 11955393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11954227-11954341:-1:exon

position:11954227:-1
position: 11954227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11954341:-1
position: 11954341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11952639-11952696:-1:exon

position:11952639:-1
position: 11952639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11952696:-1
position: 11952696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11951304-11951434:-1:exon