Arvicanthis niloticus isolate mArvNil1 chromosome 14, mArvNil1.pat.X, whole genome shotgun sequence.
type: Entry
definition: Arvicanthis niloticus isolate mArvNil1 chromosome 14, mArvNil1.pat.X, whole genome shotgun sequence.
sequence version: NC_047671.1
sequence date: 2020-05-16
sequence: sequence
division: CON
label: NC_047671.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA632612
dblink: SAMN12611849
keyword: WGS
keyword: RefSeq
source: Arvicanthis niloticus (African grass rat)
organism: Arvicanthis niloticus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022264.1.\nAssembly name: mArvNil1.pat.X\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/27. The original whole-genome shotgun project has the\naccession JAAOMG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JAN-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Freebayes v. 1.3.1;\n gEVAL manual curation v. 2020-01-16; VGP\n trio assembly pipeline v. 1.6\nAssembly Name :: mArvNil1.pat.X\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.95x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Arvicanthis niloticus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 76397992
topology: linear
so has quality: SO_0000987
location: 1..76397992
location: region:1-76397992:1
RO_0002162: 61156

NC_047671
type: RefSeq
SIO_000068: refseq

PRJNA632612
type: BioProject
SIO_000068: bioproject

SAMN12611849
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76397992:1
position: 76397992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-76397992:1:source
so part of: sequence
organism: Arvicanthis niloticus
mol type: genomic DNA
isolate: mArvNil1
specimen voucher: T564M
chromosome: 14
sex: male
tissue type: Spleen (genome), brain & testis (transcriptome)
dev stage: adult
country: USA: Santa Barbara
lat lon: 34.41938 N 119.69905 W
collection date: 06-Mar-2019
collected by: Huishi Toh

61156
type: Taxonomy
SIO_000068: taxonomy

LOC117720138
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(25937..31388)
location: region:25937-31388:-1
so has part: feature:25937-31388:-1:exon

117720138
type: Gene
SIO_000068: ncbigene

position:25937:-1
position: 25937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31388:-1
position: 31388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25937-31388:-1:exon

LOC117720138
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720138
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117720138
subclass of: SO_0000673
so part of: LOC117720138
location: complement(25937..27504)
location: region:25937-27504:-1
so has part: feature:25937-27504:-1:exon

position:27504:-1
position: 27504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25937-27504:-1:exon

LOC117720138
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720138
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117720138
subclass of: SO_0000673
so part of: LOC117720138
location: complement(28644..28704)
location: region:28644-28704:-1
so has part: feature:28644-28704:-1:exon

position:28644:-1
position: 28644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28704:-1
position: 28704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28644-28704:-1:exon

LOC117720138
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720138
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117720138
subclass of: SO_0000673
so part of: LOC117720138
location: complement(28896..29015)
location: region:28896-29015:-1
so has part: feature:28896-29015:-1:exon

position:28896:-1
position: 28896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29015:-1
position: 29015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28896-29015:-1:exon

LOC117720138
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720138
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117720138
subclass of: SO_0000673
so part of: LOC117720138
location: complement(31379..31388)
location: region:31379-31388:-1
so has part: feature:31379-31388:-1:exon

position:31379:-1
position: 31379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31379-31388:-1:exon

LOC117720141
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720141
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(32076..32474)
location: region:32076-32474:-1
so has part: feature:32076-32474:-1:exon

117720141
type: Gene
SIO_000068: ncbigene

position:32076:-1
position: 32076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32474:-1
position: 32474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32076-32474:-1:exon

LOC117720141
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720141
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117720141
subclass of: SO_0000673
so part of: LOC117720141
location: complement(32076..32474)
location: region:32076-32474:-1
so has part: feature:32076-32474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32076-32474:-1:exon

LOC117720139
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 63645..82774
location: region:63645-82774:1
so has part: feature:63645-82774:1:exon
subclass of: SO_0000010

117720139
type: Gene
SIO_000068: ncbigene

position:63645:1
position: 63645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82774:1
position: 82774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63645-82774:1:exon

LOC117720139
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117720139
product: zinc finger protein 431-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518607.1
SIO_010081: LOC117720139
subclass of: SO_0000673
so part of: LOC117720139
location: join(63645..63723,79539..79665,79859..79919,81325..82774)
location: region:63645-82774:1
so has part: feature:63645-63723:1:exon
so has part: feature:79539-79665:1:exon
so has part: feature:79859-79919:1:exon
so has part: feature:81325-82774:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63645-63723:1:exon

position:63723:1
position: 63723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79539-79665:1:exon

position:79539:1
position: 79539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79665:1
position: 79665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79859-79919:1:exon

position:79859:1
position: 79859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79919:1
position: 79919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81325-82774:1:exon

position:81325:1
position: 81325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117720139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117720139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 431-like
translation: MNAMTYDDVHVNFTQEEWALLDPSQKSLYKDVMLETYKNLTAIGYNWEDHNIEEHCQGSRRHARHERSRTGEKPYKCNECDKSFSRHCSLRIHKTTHTGEKPYKCKQCGKSFASHGQLQRHEIIHTGEKPYKCNQCGKAFVCHSNLRIHKRTHTGEKPYRCNQCGKAFACHSNLRIHKRTHTGEKPYECEQCGKAFAYQDYLQIHKRTHTGEKPYDCNQCDKAFACHNSLRRHKRTHTGEKPYKCNQCSKAFASHGNLRIHKRTHTGEKPYKCNQCGKAFAYHSYLQIHKRTHTGEKPYKCNQCGKAFAYRCELQRHERIHTGEKPYKCNQCGKSFAYHSSLRIHKRTHTGEKPYECHQCGEAFSYLYELQRHERIHTGENPYKCNQCSKAFACHGSLQIHKRTHTEEKPYECNQCGEAFPYLYKLQRHERVHTGENTYKCYQCGKAFVCHGSLQIHRRKHRGEKPYECKQCGKAFAYHGRLQSHERIHTEEELYKCNQCGKAFACHSNLQRHKGTHTGEKPYEYV
SIO_010081: LOC117720139
subclass of: SO_0000673
so part of: LOC117720139
location: join(63721..63723,79539..79665,79859..79919,81325..82714)
location: region:63721-82714:1
so has part: feature:63721-63723:1:exon
so has part: feature:79539-79665:1:exon
so has part: feature:79859-79919:1:exon
so has part: feature:81325-82714:1:exon

XP_034374498.1
type: Protein
SIO_000068: ncbiprotein

position:63721:1
position: 63721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82714:1
position: 82714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63721-63723:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79539-79665:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79859-79919:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81325-82714:1:exon

Tmx3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tmx3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(118056..145819)
location: region:118056-145819:-1
so has part: feature:118056-145819:-1:exon
subclass of: SO_0000010

117719849
type: Gene
SIO_000068: ncbigene

position:118056:-1
position: 118056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145819:-1
position: 145819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118056-145819:-1:exon

Tmx3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tmx3
product: thioredoxin related transmembrane protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 3 long SRA reads, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518223.1
SIO_010081: Tmx3
subclass of: SO_0000673
so part of: Tmx3
location: complement(join(118056..120317,121618..121686,123039..123168,125800..125856,126955..127008,127188..127245,128844..128942,131322..131388,133513..133590,134244..134343,136772..136852,138311..138356,139893..140016,141964..142003,144615..144669,145550..145819))
location: region:118056-145819:-1
so has part: feature:145550-145819:-1:exon
so has part: feature:144615-144669:-1:exon
so has part: feature:141964-142003:-1:exon
so has part: feature:139893-140016:-1:exon
so has part: feature:138311-138356:-1:exon
so has part: feature:136772-136852:-1:exon
so has part: feature:134244-134343:-1:exon
so has part: feature:133513-133590:-1:exon
so has part: feature:131322-131388:-1:exon
so has part: feature:128844-128942:-1:exon
so has part: feature:127188-127245:-1:exon
so has part: feature:126955-127008:-1:exon
so has part: feature:125800-125856:-1:exon
so has part: feature:123039-123168:-1:exon
so has part: feature:121618-121686:-1:exon
so has part: feature:118056-120317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:145550-145819:-1:exon

position:145550:-1
position: 145550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144615-144669:-1:exon

position:144615:-1
position: 144615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144669:-1
position: 144669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141964-142003:-1:exon

position:141964:-1
position: 141964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142003:-1
position: 142003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139893-140016:-1:exon

position:139893:-1
position: 139893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140016:-1
position: 140016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:138311-138356:-1:exon

position:138311:-1
position: 138311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138356:-1
position: 138356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136772-136852:-1:exon

position:136772:-1
position: 136772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136852:-1
position: 136852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134244-134343:-1:exon

position:134244:-1
position: 134244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134343:-1
position: 134343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:133513-133590:-1:exon

position:133513:-1
position: 133513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133590:-1
position: 133590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:131322-131388:-1:exon

position:131322:-1
position: 131322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131388:-1
position: 131388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:128844-128942:-1:exon

position:128844:-1
position: 128844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128942:-1
position: 128942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:127188-127245:-1:exon

position:127188:-1
position: 127188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127245:-1
position: 127245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:126955-127008:-1:exon

position:126955:-1
position: 126955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127008:-1
position: 127008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:125800-125856:-1:exon

position:125800:-1
position: 125800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125856:-1
position: 125856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:123039-123168:-1:exon

position:123039:-1
position: 123039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123168:-1
position: 123168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:121618-121686:-1:exon

position:121618:-1
position: 121618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121686:-1
position: 121686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:118056-120317:-1:exon

position:120317:-1
position: 120317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmx3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tmx3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein disulfide-isomerase TMX3
translation: MASAAERRSWAALRLCAAVILLDLAVCKGFVEDLNESFKDNRKDDIWLVDFYAPWCGHCKKLEPIWNEVGLEMKSIGSPVKVGKMDATSYSSIASEFGVRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFDHVQKRHRVFFVYIGGESPLKEKYIDAASELIVYTYFFSASEDVVPEYVTLKEMPAVLVFKDDTYFVYDEYEDGDLSSWISRERFQNYLTIDGFLLYELGDTGKLVAIAVIDEKNTSLEHTRLKSIIQEVARDFRDHFHRDFQFGHMDGNDYINTLLMDELTAPTIVVLNTSNQQYFLLDRHIKDASDMVQFINSILDGTVPAQGGDSIFQRLRRIVFDAKSTIVSIFKSSPLMGCFLFGLPLGVISIMCYGIYTADTDGGYIEERYEVPKSEMENQEQIEENKEQESSSGESLVPAVQEPKDVLEKKKD
SIO_010081: Tmx3
subclass of: SO_0000673
so part of: Tmx3
location: complement(join(120060..120317,121618..121686,123039..123168,125800..125856,126955..127008,127188..127245,128844..128942,131322..131388,133513..133590,134244..134343,136772..136852,138311..138356,139893..140016,141964..142003,144615..144669,145550..145604))
location: region:120060-145604:-1
so has part: feature:145550-145604:-1:exon
so has part: feature:144615-144669:-1:exon
so has part: feature:141964-142003:-1:exon
so has part: feature:139893-140016:-1:exon
so has part: feature:138311-138356:-1:exon
so has part: feature:136772-136852:-1:exon
so has part: feature:134244-134343:-1:exon
so has part: feature:133513-133590:-1:exon
so has part: feature:131322-131388:-1:exon
so has part: feature:128844-128942:-1:exon
so has part: feature:127188-127245:-1:exon
so has part: feature:126955-127008:-1:exon
so has part: feature:125800-125856:-1:exon
so has part: feature:123039-123168:-1:exon
so has part: feature:121618-121686:-1:exon
so has part: feature:120060-120317:-1:exon

XP_034374114.1
type: Protein
SIO_000068: ncbiprotein

position:120060:-1
position: 120060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145604:-1
position: 145604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145550-145604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144615-144669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141964-142003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139893-140016:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:138311-138356:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:136772-136852:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134244-134343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:133513-133590:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:131322-131388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:128844-128942:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:127188-127245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126955-127008:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:125800-125856:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:123039-123168:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:121618-121686:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:120060-120317:-1:exon

LOC117720241
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720241
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(149952..150076)
location: region:149952-150076:-1
so has part: feature:149952-150076:-1:exon

117720241
type: Gene
SIO_000068: ncbigene

position:149952:-1
position: 149952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150076:-1
position: 150076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149952-150076:-1:exon

LOC117720241
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720241
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117720241
subclass of: SO_0000673
so part of: LOC117720241
location: complement(149952..150076)
location: region:149952-150076:-1
so has part: feature:149952-150076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:149952-150076:-1:exon

LOC117720278
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720278
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(344852..344916)
location: region:344852-344916:-1
so has part: feature:344852-344916:-1:exon
subclass of: SO_0000623

117720278
type: Gene
SIO_000068: ncbigene

position:344852:-1
position: 344852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344916:-1
position: 344916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344852-344916:-1:exon

LOC117720278
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117720278
product: U7 small nuclear RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00066
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608293.1
SIO_010081: LOC117720278
subclass of: SO_0000673
so part of: LOC117720278
location: complement(344852..344916)
location: region:344852-344916:-1
so has part: feature:344852-344916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344852-344916:-1:exon

LOC117719850
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(726364..727266)
location: region:726364-727266:-1
so has part: feature:726364-727266:-1:exon
subclass of: SO_0000010

117719850
type: Gene
SIO_000068: ncbigene

position:726364:-1
position: 726364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727266:-1
position: 727266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726364-727266:-1:exon

LOC117719850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117719850
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 48% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034518224.1
SIO_010081: LOC117719850
subclass of: SO_0000673
so part of: LOC117719850
location: complement(join(726364..726402,726554..727266))
location: region:726364-727266:-1
so has part: feature:726554-727266:-1:exon
so has part: feature:726364-726402:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726554-727266:-1:exon

position:726554:-1
position: 726554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726364-726402:-1:exon

position:726402:-1
position: 726402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117719850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117719850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MSLKLEAMASAVELLCWAIRFPESTTAVRRPDHAGLASSRRPPAVAPPLISPQAPAGADPGSIAGPPHRETGDPGPGTAQQHQHLATRRHLRPWPQAEHRDPRPPAVPPPPPRRRPRQHPQAGASLGGSQLAGAHHRGSPARRRGRDGGAGRCARSAPSPLPAGWQGWRMLARCTPSLSSWARSSACHPRLGYGSHRSPVLAPLAQAWIPKDKF
SIO_010081: LOC117719850
subclass of: SO_0000673
so part of: LOC117719850
location: complement(join(726397..726402,726554..727192))
location: region:726397-727192:-1
so has part: feature:726554-727192:-1:exon
so has part: feature:726397-726402:-1:exon

XP_034374115.1
type: Protein
SIO_000068: ncbiprotein

position:726397:-1
position: 726397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727192:-1
position: 727192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726554-727192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:726397-726402:-1:exon

Dok6
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Dok6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 727125..1106491
location: region:727125-1106491:1
so has part: feature:727125-1106491:1:exon
subclass of: SO_0000010

117719851
type: Gene
SIO_000068: ncbigene

position:727125:1
position: 727125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106491:1
position: 1106491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727125-1106491:1:exon

Dok6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dok6
product: docking protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518225.1
SIO_010081: Dok6
subclass of: SO_0000673
so part of: Dok6
location: join(727125..727235,841137..841244,868069..868183,943990..944109,958921..959110,1006282..1006420,1018480..1018597,1106144..1106491)
location: region:727125-1106491:1
so has part: feature:727125-727235:1:exon
so has part: feature:841137-841244:1:exon
so has part: feature:868069-868183:1:exon
so has part: feature:943990-944109:1:exon
so has part: feature:958921-959110:1:exon
so has part: feature:1006282-1006420:1:exon
so has part: feature:1018480-1018597:1:exon
so has part: feature:1106144-1106491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727125-727235:1:exon

position:727235:1
position: 727235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841137-841244:1:exon

position:841137:1
position: 841137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:841244:1
position: 841244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:868069-868183:1:exon

position:868069:1
position: 868069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868183:1
position: 868183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:943990-944109:1:exon

position:943990:1
position: 943990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944109:1
position: 944109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:958921-959110:1:exon

position:958921:1
position: 958921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959110:1
position: 959110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1006282-1006420:1:exon

position:1006282:1
position: 1006282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006420:1
position: 1006420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1018480-1018597:1:exon

position:1018480:1
position: 1018480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018597:1
position: 1018597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1106144-1106491:1:exon

position:1106144:1
position: 1106144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dok6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dok6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: docking protein 6
translation: MASNFNDIVKQGYVKIRSRKLGIFRRCWLVFKKASSKGPRRLEKFPDEKAAYFRNFHKVTELHNIKNITRLPRETKKHAVAIIFHDETSKTFACESELEAEEWCKHLCMECLGTRLNDISLGEPDLLAAGVQREQNERFNVYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFESGRMCDTGEGLFTFQTREGEMIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTEPMTLSKSISLPRSAYWHHITRQNSVGEIYSLQGHGFGSSKMSRAQTFPSYAPEQSEEAQPPLSRSSSYGFSYSSSLIQ
SIO_010081: Dok6
subclass of: SO_0000673
so part of: Dok6
location: join(727170..727235,841137..841244,868069..868183,943990..944109,958921..959110,1006282..1006420,1018480..1018597,1106144..1106283)
location: region:727170-1106283:1
so has part: feature:727170-727235:1:exon
so has part: feature:841137-841244:1:exon
so has part: feature:868069-868183:1:exon
so has part: feature:943990-944109:1:exon
so has part: feature:958921-959110:1:exon
so has part: feature:1006282-1006420:1:exon
so has part: feature:1018480-1018597:1:exon
so has part: feature:1106144-1106283:1:exon

XP_034374116.1
type: Protein
SIO_000068: ncbiprotein

position:727170:1
position: 727170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106283:1
position: 1106283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727170-727235:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841137-841244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:868069-868183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:943990-944109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958921-959110:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006282-1006420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1018480-1018597:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1106144-1106283:1:exon

Cd226
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Cd226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1138858..1211696)
location: region:1138858-1211696:-1
so has part: feature:1138858-1211696:-1:exon
subclass of: SO_0000010

117719958
type: Gene
SIO_000068: ncbigene

position:1138858:-1
position: 1138858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211696:-1
position: 1211696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138858-1211696:-1:exon

Cd226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cd226
product: CD226 molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins
transcript id: XM_034518424.1
SIO_010081: Cd226
subclass of: SO_0000673
so part of: Cd226
location: complement(join(1138858..1140165,1141077..1141134,1145560..1145656,1165435..1165782,1204202..1204273,1211482..1211696))
location: region:1138858-1211696:-1
so has part: feature:1211482-1211696:-1:exon
so has part: feature:1204202-1204273:-1:exon
so has part: feature:1165435-1165782:-1:exon
so has part: feature:1145560-1145656:-1:exon
so has part: feature:1141077-1141134:-1:exon
so has part: feature:1138858-1140165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1211482-1211696:-1:exon

position:1211482:-1
position: 1211482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1204202-1204273:-1:exon

position:1204202:-1
position: 1204202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204273:-1
position: 1204273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1165435-1165782:-1:exon

position:1165435:-1
position: 1165435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165782:-1
position: 1165782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1145560-1145656:-1:exon

position:1145560:-1
position: 1145560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145656:-1
position: 1145656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1141077-1141134:-1:exon

position:1141077:-1
position: 1141077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141134:-1
position: 1141134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1138858-1140165:-1:exon

position:1140165:-1
position: 1140165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cd226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cd226
product: CD226 molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 9 Proteins
transcript id: XM_034518423.1
SIO_010081: Cd226
subclass of: SO_0000673
so part of: Cd226
location: complement(join(1138940..1140165,1141077..1141134,1145560..1145656,1165435..1165782,1203615..1203953,1204202..1204273,1211482..1211696))
location: region:1138940-1211696:-1
so has part: feature:1211482-1211696:-1:exon
so has part: feature:1204202-1204273:-1:exon
so has part: feature:1203615-1203953:-1:exon
so has part: feature:1165435-1165782:-1:exon
so has part: feature:1145560-1145656:-1:exon
so has part: feature:1141077-1141134:-1:exon
so has part: feature:1138940-1140165:-1:exon

position:1138940:-1
position: 1138940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1211482-1211696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1204202-1204273:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1203615-1203953:-1:exon

position:1203615:-1
position: 1203615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203953:-1
position: 1203953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1165435-1165782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1145560-1145656:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141077-1141134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138940-1140165:-1:exon

Cd226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cd226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD226 antigen isoform X2
translation: MAFLTWLLAILHVHKDSFEIAAPLDSYLSAKPGQNVTLNCQLQRTWPVQQVIWEKVQPHQVDILASCNLSQGTRYTSKYLRQTWSNCSQESMESVLIIPYAMASDSGLYRCRSEASTEKTKTFVIRLIITDGGTNKHFILPIVGGLASLLLVILIIIVIILYNRKRRRQVRTPLKEPRDKQSKVATNCRSPTSPFQSTDDEKEDIYVNYPTFSQRPKPRF
SIO_010081: Cd226
subclass of: SO_0000673
so part of: Cd226
location: complement(join(1140052..1140165,1141077..1141134,1145560..1145656,1165435..1165782,1204202..1204247))
location: region:1140052-1204247:-1
so has part: feature:1204202-1204247:-1:exon
so has part: feature:1165435-1165782:-1:exon
so has part: feature:1145560-1145656:-1:exon
so has part: feature:1141077-1141134:-1:exon
so has part: feature:1140052-1140165:-1:exon

XP_034374315.1
type: Protein
SIO_000068: ncbiprotein

position:1140052:-1
position: 1140052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204247:-1
position: 1204247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204202-1204247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1165435-1165782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1145560-1145656:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1141077-1141134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140052-1140165:-1:exon

Cd226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cd226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD226 antigen isoform X1
translation: MAFLTWLLAILHVHKALCEETLWDTTVRLSETMTLECVYPLMDNLTQVEWTKNIGTNTVSIAVYNPNHNMHIDPNYLHRVHFLNSTVGFRNMSLSFYNASEADIGTYSCLFHAFPRGPWEKKIKVVWSDSFEIAAPLDSYLSAKPGQNVTLNCQLQRTWPVQQVIWEKVQPHQVDILASCNLSQGTRYTSKYLRQTWSNCSQESMESVLIIPYAMASDSGLYRCRSEASTEKTKTFVIRLIITDGGTNKHFILPIVGGLASLLLVILIIIVIILYNRKRRRQVRTPLKEPRDKQSKVATNCRSPTSPFQSTDDEKEDIYVNYPTFSQRPKPRF
SIO_010081: Cd226
subclass of: SO_0000673
so part of: Cd226
location: complement(join(1140052..1140165,1141077..1141134,1145560..1145656,1165435..1165782,1203615..1203953,1204202..1204247))
location: region:1140052-1204247:-1
so has part: feature:1204202-1204247:-1:exon
so has part: feature:1203615-1203953:-1:exon
so has part: feature:1165435-1165782:-1:exon
so has part: feature:1145560-1145656:-1:exon
so has part: feature:1141077-1141134:-1:exon
so has part: feature:1140052-1140165:-1:exon

XP_034374314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1204202-1204247:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1203615-1203953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1165435-1165782:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1145560-1145656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141077-1141134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1140052-1140165:-1:exon

Rttn
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Rttn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1258686..1422947)
location: region:1258686-1422947:-1
so has part: feature:1258686-1422947:-1:exon
subclass of: SO_0000010

117720153
type: Gene
SIO_000068: ncbigene

position:1258686:-1
position: 1258686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422947:-1
position: 1422947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1258686-1422947:-1:exon

Rttn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rttn
product: rotatin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518621.1
SIO_010081: Rttn
subclass of: SO_0000673
so part of: Rttn
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Rttn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rttn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rotatin
translation: MVLAGLIRKLGHQLAEIRERALKSILCKIEHNLICCADLIQERLLFLHLLEWFNFPSVPMKEEVLNLLSRLVKYPPAVQHLIDLGAVEFLSKLRPNVEPAIQAEIDGILDGLFILPSEVPALCSATYHTDQIELSQQPEVLTGYFPQDKSNFQQMEVPPGPAGNPTVKWLRFSVFPWLPLTTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQGLLCLVKLAFGGDGKHRLALQSVSCLQQLCTSLRNRLNFYRDPNLFSNKQDTISQNSSLSYCHEARGPYHSPNPSPGSSSSRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRISVHSPLDVAHVDLPELEAEDTLELQFQQLSLPQFCISTLEAAVPLLRTGSREMIIRILELLAEDMLLIGQAISSEIWDDNSLFAIDVKEKLLQVLGSLGETMCYRKTSFSLEQAESVLVHHRMAFVSISLFTVRLLQILLPVEKASEFLPESMSAALFFVSLDMPISLEYPEIHDTVVAYLEQLDSENYSIYKRTAEAVYSIECTCNFLSDVEKEGEKNLLELVELADQALRSFSYHQHSPLIKEIICICSKIWKSAQASPLLQGESQKVFLHMLSHPLPQVKVETYQCCLEIVKECLGVHNVTKPVSSLCSGIHFLLHPKVLYEISAFGIQESKNEVNAAAKAILLYLLQGRLMMTALTWNKFIESLCPVIPVLQGYADTEDPLGNCILLLSKVSSEAEEGILPCTTWLKSVLRLLLVKKPSVRSLALKLLAFHLTSEEGADKKRPFIDARVLSRVTNLFIVKKPIDLKLDDRRELVIKLETVKKVYEIFTSDDVDLVLRKSAAEQLAVIMQDIKMHTVVKKLCLIEKIIGYLNEFVGQDGKVIECLIQPCLTLLRKVLYADPVIRVSLSQQASLLTLLLRVSLIFHEDCTVVAEVGALFCLLLFDEVSRMDMWSDNFSNKPSLSSVFSLPVSVFRRYHLPVHVIGHHAVSPYSIVLPLSTECLALKPVSDMLRLAWNLAWYHGSDNLLKQMTSEAKSQEFLDTLQLSTEDILTLKITYTDSGLKDCLQSIIQAGGHRDVRAAITRMSFYLLNDKLSLKDNIGPCGVTLKSLAWHTVLNRFLQVLPACTEDEKLLIDIIHFLNKLIKEERKNPSIELLNWILELLLRHNPNPLLDLLVLTESHAREEADDIRTAVRQQLQKELISLLNSLLLVFMTVSDRKCLELFYVFQTQLSLKLLQCLRVTDAPHFYGLPSLERTLAGMAHLTAFPGWSAHSPLSKPLEICGKYLSGLLEVITSFYVERGGNAMSFMGKGVTKSTVLCLLHLSHEMMVQAPGSEWMPLWFLPLGSHSEEHAPTQQGLAWLIPLWVDRDPEVRFTSLGLGAALTTIEAGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFILQNLLVIPMPSEVIKDYTWQGPCVHDEDSGLSLSGKPALQALLYHCHFYEHLTHMVKHCYVGRYMFDVNISAFTETTECSDLNGLDDSFKFWRAPSGTSIQDHEPSSLSTSETMVAASVVSAEIQPLLPSTLLPETALDQFVMQGQHEIRTLRPRDSSLSASLHRQCVFVTPSLLSAICSLLENLLAVTPRDAANAFQQAHLIELLCSTVDASLIEMCIQELKTPLPLPSAVEHTQAQASFFLEYLSSLSQLLKSCLLVDPKLVTQDELLKPLITNVIRVLIVCIKDVLDVQLVLAFYRTWTHLFDFLATLLRKAGAVSLVPLTSVLAKHWEAVTDTLCRCVGLSVKCPSLSIASLQFLSVLLAEEEKRHVQDKDKTNACQIPTVAFLLDGTQGGLRSSERLNETILQCYEGISSKDVLKRVAASALMSLLAVSRSAQKHALRSDLIENCMEQMKHINAQLNLDLLKPGKAALKKKEDGFIKELSITMQLLRNCLYQNEECKVAALEARLVPVLHSLWPWLLMEDSLMQIALQLLCVYTANFPTGCSSLCWSNYGQYIQT…
SIO_010081: Rttn
subclass of: SO_0000673
so part of: Rttn
location: complement(join(1259023..1259108,1260130..1260199,1261114..1261217,1268446..1268713,1275487..1275686,1277848..1277974,1281456..1281533,1282911..1283008,1283879..1283984,1290345..1290562,1291552..1291689,1300069..1300222,1302172..1302262,1303741..1303930,1310276..1310366,1315897..1315988,1317610..1317799,1325794..1325865,1327666..1327824,1331170..1331280,1331926..1332054,1335264..1335483,1342480..1342634,1347307..1347451,1348617..1348856,1349389..1349577,1358235..1358303,1358885..1358981,1363508..1363625,1364603..1364691,1369475..1369574,1371012..1371183,1374010..1374149,1376097..1376213,1376661..1376786,1378727..1378853,1380325..1380437,1382221..1382433,1395965..1396135,1401848..1401963,1409254..1409435,1411371..1411536,1415830..1415980,1416787..1416901,1418597..1418687,1420258..1420347,1421091..1421268,1422166..1422353,1422660..1422690))
location: region:1259023-1422690:-1
so has part: feature:1422660-1422690:-1:exon
so has part: feature:1422166-1422353:-1:exon
so has part: feature:1421091-1421268:-1:exon
so has part: feature:1420258-1420347:-1:exon
so has part: feature:1418597-1418687:-1:exon
so has part: feature:1416787-1416901:-1:exon
so has part: feature:1415830-1415980:-1:exon
so has part: feature:1411371-1411536:-1:exon
so has part: feature:1409254-1409435:-1:exon
so has part: feature:1401848-1401963:-1:exon
so has part: feature:1395965-1396135:-1:exon
so has part: feature:1382221-1382433:-1:exon
so has part: feature:1380325-1380437:-1:exon
so has part: feature:1378727-1378853:-1:exon
so has part: feature:1376661-1376786:-1:exon
so has part: feature:1376097-1376213:-1:exon
so has part: feature:1374010-1374149:-1:exon
so has part: feature:1371012-1371183:-1:exon
so has part: feature:1369475-1369574:-1:exon
so has part: feature:1364603-1364691:-1:exon
so has part: feature:1363508-1363625:-1:exon
so has part: feature:1358885-1358981:-1:exon
so has part: feature:1358235-1358303:-1:exon
so has part: feature:1349389-1349577:-1:exon
so has part: feature:1348617-1348856:-1:exon
so has part: feature:1347307-1347451:-1:exon
so has part: feature:1342480-1342634:-1:exon
so has part: feature:1335264-1335483:-1:exon
so has part: feature:1331926-1332054:-1:exon
so has part: feature:1331170-1331280:-1:exon
so has part: feature:1327666-1327824:-1:exon
so has part: feature:1325794-1325865:-1:exon
so has part: feature:1317610-1317799:-1:exon
so has part: feature:1315897-1315988:-1:exon
so has part: feature:1310276-1310366:-1:exon
so has part: feature:1303741-1303930:-1:exon
so has part: feature:1302172-1302262:-1:exon
so has part: feature:1300069-1300222:-1:exon
so has part: feature:1291552-1291689:-1:exon
so has part: feature:1290345-1290562:-1:exon
so has part: feature:1283879-1283984:-1:exon
so has part: feature:1282911-1283008:-1:exon
so has part: feature:1281456-1281533:-1:exon
so has part: feature:1277848-1277974:-1:exon
so has part: feature:1275487-1275686:-1:exon
so has part: feature:1268446-1268713:-1:exon
so has part: feature:1261114-1261217:-1:exon
so has part: feature:1260130-1260199:-1:exon
so has part: feature:1259023-1259108:-1:exon

XP_034374512.1
type: Protein
SIO_000068: ncbiprotein

position:1259023:-1
position: 1259023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422690:-1
position: 1422690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1422660-1422690:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1422166-1422353:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1421091-1421268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1420258-1420347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1418597-1418687:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1416787-1416901:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1415830-1415980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1411371-1411536:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1409254-1409435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1401848-1401963:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395965-1396135:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1382221-1382433:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1380325-1380437:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1378727-1378853:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1376661-1376786:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1376097-1376213:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1374010-1374149:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1371012-1371183:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1369475-1369574:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1364603-1364691:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1363508-1363625:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1358885-1358981:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1358235-1358303:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1349389-1349577:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1348617-1348856:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1347307-1347451:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1342480-1342634:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1335264-1335483:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1331926-1332054:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1331170-1331280:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1327666-1327824:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1325794-1325865:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1317610-1317799:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1315897-1315988:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1310276-1310366:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1303741-1303930:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1302172-1302262:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1300069-1300222:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1291552-1291689:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1290345-1290562:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1283879-1283984:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1282911-1283008:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1281456-1281533:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1277848-1277974:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1275487-1275686:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1268446-1268713:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1261114-1261217:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1260130-1260199:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1259023-1259108:-1:exon

LOC117719878
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1479865..1480356)
location: region:1479865-1480356:-1
so has part: feature:1479865-1480356:-1:exon
subclass of: SO_0000010

117719878
type: Gene
SIO_000068: ncbigene

position:1479865:-1
position: 1479865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480356:-1
position: 1480356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479865-1480356:-1:exon

LOC117719878
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117719878
product: 60S ribosomal protein L27-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 36 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518270.1
SIO_010081: LOC117719878
subclass of: SO_0000673
so part of: LOC117719878
location: complement(1479865..1480356)
location: region:1479865-1480356:-1
so has part: feature:1479865-1480356:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1479865-1480356:-1:exon

LOC117719878
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117719878
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L27-like
translation: MGKFMKPGKVVLVLAGHYSGRKAIIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF
SIO_010081: LOC117719878
subclass of: SO_0000673
so part of: LOC117719878
location: complement(1479905..1480315)
location: region:1479905-1480315:-1
so has part: feature:1479905-1480315:-1:exon

XP_034374161.1
type: Protein
SIO_000068: ncbiprotein

position:1479905:-1
position: 1479905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480315:-1
position: 1480315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1479905-1480315:-1:exon

LOC117720051
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720051
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1485736..1486570
location: region:1485736-1486570:1
so has part: feature:1485736-1486570:1:exon

117720051
type: Gene
SIO_000068: ncbigene

position:1485736:1
position: 1485736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486570:1
position: 1486570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485736-1486570:1:exon

LOC117720051
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720051
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC117720051
subclass of: SO_0000673
so part of: LOC117720051
location: 1485736..1486570
location: region:1485736-1486570:1
so has part: feature:1485736-1486570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485736-1486570:1:exon

Socs6
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Socs6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1506408..1533540
location: region:1506408-1533540:1
so has part: feature:1506408-1533540:1:exon
subclass of: SO_0000010

117720006
type: Gene
SIO_000068: ncbigene

position:1506408:1
position: 1506408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1533540:1
position: 1533540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506408-1533540:1:exon

Socs6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Socs6
product: suppressor of cytokine signaling 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 2 long SRA reads, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034518478.1
SIO_010081: Socs6
subclass of: SO_0000673
so part of: Socs6
location: join(1506408..1506583,1512451..1512575,1531116..1533540)
location: region:1506408-1533540:1
so has part: feature:1506408-1506583:1:exon
so has part: feature:1512451-1512575:1:exon
so has part: feature:1531116-1533540:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1506408-1506583:1:exon

position:1506583:1
position: 1506583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1512451-1512575:1:exon

position:1512451:1
position: 1512451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1512575:1
position: 1512575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1531116-1533540:1:exon

position:1531116:1
position: 1531116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Socs6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Socs6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppressor of cytokine signaling 6
translation: MKKISLKTFRKSFNLSKSKDETEFMVVQPQSLAGDFVKDDSLFGSCYGKDMASCDIGSEDEKGKNRSKSESLMGTLKRRLSAKQKTKGKSGTAPTDEDTFSSASAPGGLKDVRAPRPIRSTSLRSHHYSPTPWPLRPTSSEETCIKMEMRVKALVHAASPGPVNGVRKELRDLQPRELRDLQPEPRPESRCSPSSPGDLSLQLEEHVPVVIGLMSQDYLQYTVPLDDGMCPLEGPRSCCLDTSSPMEVSAVPLPGATGAFSEDDSHVDQDLVVGPEILVDSSVNNLLIGTTGVMLQSPRGGHDDAPPLSPLLPPIQNNPIQRNFSGLSGPDLHMAESVRCHLNFDPNSAPGVARVYDSVQSSGPMVVTSLTEELKKLAKQGWYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEHSIRDSENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQKLPLPNKMKDYLQEKHY
SIO_010081: Socs6
subclass of: SO_0000673
so part of: Socs6
location: 1531245..1532846
location: region:1531245-1532846:1
so has part: feature:1531245-1532846:1:exon

XP_034374369.1
type: Protein
SIO_000068: ncbiprotein

position:1531245:1
position: 1531245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1532846:1
position: 1532846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1531245-1532846:1:exon

LOC117720052
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1664094..1671632)
location: region:1664094-1671632:-1
so has part: feature:1664094-1671632:-1:exon

117720052
type: Gene
SIO_000068: ncbigene

position:1664094:-1
position: 1664094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1671632:-1
position: 1671632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664094-1671632:-1:exon

LOC117720052
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720052
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC117720052
subclass of: SO_0000673
so part of: LOC117720052
location: complement(1664094..1664842)
location: region:1664094-1664842:-1
so has part: feature:1664094-1664842:-1:exon

position:1664842:-1
position: 1664842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664094-1664842:-1:exon

LOC117720052
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720052
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC117720052
subclass of: SO_0000673
so part of: LOC117720052
location: complement(1670692..1670786)
location: region:1670692-1670786:-1
so has part: feature:1670692-1670786:-1:exon

position:1670692:-1
position: 1670692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1670786:-1
position: 1670786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1670692-1670786:-1:exon

LOC117720052
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720052
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC117720052
subclass of: SO_0000673
so part of: LOC117720052
location: complement(1671568..1671632)
location: region:1671568-1671632:-1
so has part: feature:1671568-1671632:-1:exon

position:1671568:-1
position: 1671568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1671568-1671632:-1:exon

LOC117720054
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1910394..1911194
location: region:1910394-1911194:1
so has part: feature:1910394-1911194:1:exon

117720054
type: Gene
SIO_000068: ncbigene

position:1910394:1
position: 1910394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1911194:1
position: 1911194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1910394-1911194:1:exon

LOC117720054
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720054
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC117720054
subclass of: SO_0000673
so part of: LOC117720054
location: 1910394..1911194
location: region:1910394-1911194:1
so has part: feature:1910394-1911194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1910394-1911194:1:exon

LOC117720055
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2462890..2463379)
location: region:2462890-2463379:-1
so has part: feature:2462890-2463379:-1:exon

117720055
type: Gene
SIO_000068: ncbigene

position:2462890:-1
position: 2462890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463379:-1
position: 2463379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2462890-2463379:-1:exon

LOC117720055
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720055
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC117720055
subclass of: SO_0000673
so part of: LOC117720055
location: complement(2462890..2463379)
location: region:2462890-2463379:-1
so has part: feature:2462890-2463379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2462890-2463379:-1:exon

LOC117720056
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3031541..3033107)
location: region:3031541-3033107:-1
so has part: feature:3031541-3033107:-1:exon

117720056
type: Gene
SIO_000068: ncbigene

position:3031541:-1
position: 3031541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3033107:-1
position: 3033107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3031541-3033107:-1:exon

LOC117720056
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117720056
subclass of: SO_0000673
so part of: LOC117720056
location: complement(3031541..3033107)
location: region:3031541-3033107:-1
so has part: feature:3031541-3033107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3031541-3033107:-1:exon

LOC117720057
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3287982..3289183
location: region:3287982-3289183:1
so has part: feature:3287982-3289183:1:exon

117720057
type: Gene
SIO_000068: ncbigene

position:3287982:1
position: 3287982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3289183:1
position: 3289183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3287982-3289183:1:exon

LOC117720057
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720057
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 8% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117720057
subclass of: SO_0000673
so part of: LOC117720057
location: 3287982..3289183
location: region:3287982-3289183:1
so has part: feature:3287982-3289183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3287982-3289183:1:exon

LOC117720058
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3300022..3302135)
location: region:3300022-3302135:-1
so has part: feature:3300022-3302135:-1:exon

117720058
type: Gene
SIO_000068: ncbigene

position:3300022:-1
position: 3300022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3302135:-1
position: 3302135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3300022-3302135:-1:exon

LOC117720058
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720058
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC117720058
subclass of: SO_0000673
so part of: LOC117720058
location: complement(3300022..3300625)
location: region:3300022-3300625:-1
so has part: feature:3300022-3300625:-1:exon

position:3300625:-1
position: 3300625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3300022-3300625:-1:exon

LOC117720058
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720058
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC117720058
subclass of: SO_0000673
so part of: LOC117720058
location: complement(3301412..3302135)
location: region:3301412-3302135:-1
so has part: feature:3301412-3302135:-1:exon

position:3301412:-1
position: 3301412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3301412-3302135:-1:exon

LOC117720060
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3407708..3408145)
location: region:3407708-3408145:-1
so has part: feature:3407708-3408145:-1:exon

117720060
type: Gene
SIO_000068: ncbigene

position:3407708:-1
position: 3407708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3408145:-1
position: 3408145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3407708-3408145:-1:exon

LOC117720060
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720060
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins
pseudo: true
SIO_010081: LOC117720060
subclass of: SO_0000673
so part of: LOC117720060
location: complement(3407708..3408145)
location: region:3407708-3408145:-1
so has part: feature:3407708-3408145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3407708-3408145:-1:exon

Cbln2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Cbln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3467833..3475316)
location: region:3467833-3475316:-1
so has part: feature:3467833-3475316:-1:exon
subclass of: SO_0000010

117720122
type: Gene
SIO_000068: ncbigene

position:3467833:-1
position: 3467833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3475316:-1
position: 3475316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3467833-3475316:-1:exon

Cbln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cbln2
product: cerebellin 2 precursor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 long SRA reads, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034518582.1
SIO_010081: Cbln2
subclass of: SO_0000673
so part of: Cbln2
location: complement(join(3467833..3469513,3469719..3469838,3472655..3473175,3474912..3475316))
location: region:3467833-3475316:-1
so has part: feature:3474912-3475316:-1:exon
so has part: feature:3472655-3473175:-1:exon
so has part: feature:3469719-3469838:-1:exon
so has part: feature:3467833-3469513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3474912-3475316:-1:exon

position:3474912:-1
position: 3474912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3472655-3473175:-1:exon

position:3472655:-1
position: 3472655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473175:-1
position: 3473175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3469719-3469838:-1:exon

position:3469719:-1
position: 3469719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3469838:-1
position: 3469838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3467833-3469513:-1:exon

position:3469513:-1
position: 3469513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cbln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cbln2
product: cerebellin 2 precursor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034518583.1
SIO_010081: Cbln2
subclass of: SO_0000673
so part of: Cbln2
location: complement(join(3467833..3469513,3469719..3469838,3472655..3473175,3474370..3475263))
location: region:3467833-3475263:-1
so has part: feature:3474370-3475263:-1:exon
so has part: feature:3472655-3473175:-1:exon
so has part: feature:3469719-3469838:-1:exon
so has part: feature:3467833-3469513:-1:exon

position:3475263:-1
position: 3475263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3474370-3475263:-1:exon

position:3474370:-1
position: 3474370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3472655-3473175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3469719-3469838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3467833-3469513:-1:exon

Cbln2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cbln2
product: cerebellin 2 precursor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 long SRA read, 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034518584.1
SIO_010081: Cbln2
subclass of: SO_0000673
so part of: Cbln2
location: complement(join(3467833..3469513,3469719..3469838,3472655..3473175,3473803..3474008))
location: region:3467833-3474008:-1
so has part: feature:3473803-3474008:-1:exon
so has part: feature:3472655-3473175:-1:exon
so has part: feature:3469719-3469838:-1:exon
so has part: feature:3467833-3469513:-1:exon

position:3474008:-1
position: 3474008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3473803-3474008:-1:exon

position:3473803:-1
position: 3473803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3472655-3473175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3469719-3469838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3467833-3469513:-1:exon

Cbln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cbln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MPAPGQGPRGRLLSMPGRRGALRERADFGSSLGAALALLLLLLPACCPVTAQNDTEPIVLEGKCLVVCDSSPSGDGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: Cbln2
subclass of: SO_0000673
so part of: Cbln2
location: complement(join(3469316..3469513,3469719..3469838,3472655..3473011))
location: region:3469316-3473011:-1
so has part: feature:3472655-3473011:-1:exon
so has part: feature:3469719-3469838:-1:exon
so has part: feature:3469316-3469513:-1:exon

XP_034374473.1
type: Protein
SIO_000068: ncbiprotein

position:3469316:-1
position: 3469316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3473011:-1
position: 3473011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3472655-3473011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3469719-3469838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3469316-3469513:-1:exon

Cbln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cbln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MPAPGQGPRGRLLSMPGRRGALRERADFGSSLGAALALLLLLLPACCPVTAQNDTEPIVLEGKCLVVCDSSPSGDGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: Cbln2
subclass of: SO_0000673
so part of: Cbln2
location: complement(join(3469316..3469513,3469719..3469838,3472655..3473011))
location: region:3469316-3473011:-1
so has part: feature:3472655-3473011:-1:exon
so has part: feature:3469719-3469838:-1:exon
so has part: feature:3469316-3469513:-1:exon

XP_034374474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3472655-3473011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3469719-3469838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3469316-3469513:-1:exon

Cbln2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cbln2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cerebellin-2
translation: MPAPGQGPRGRLLSMPGRRGALRERADFGSSLGAALALLLLLLPACCPVTAQNDTEPIVLEGKCLVVCDSSPSGDGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL
SIO_010081: Cbln2
subclass of: SO_0000673
so part of: Cbln2
location: complement(join(3469316..3469513,3469719..3469838,3472655..3473011))
location: region:3469316-3473011:-1
so has part: feature:3472655-3473011:-1:exon
so has part: feature:3469719-3469838:-1:exon
so has part: feature:3469316-3469513:-1:exon

XP_034374475.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3472655-3473011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3469719-3469838:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3469316-3469513:-1:exon

Neto1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Neto1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3689883..3801132)
location: region:3689883-3801132:-1
so has part: feature:3689883-3801132:-1:exon
subclass of: SO_0000010

117720163
type: Gene
SIO_000068: ncbigene

position:3689883:-1
position: 3689883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3801132:-1
position: 3801132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3689883-3801132:-1:exon

Neto1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Neto1
product: neuropilin and tolloid like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034518632.1
SIO_010081: Neto1
subclass of: SO_0000673
so part of: Neto1
location: complement(join(3689883..3690140,3691637..3691711,3692608..3693166,3696353..3696466,3721194..3721422,3732824..3732951,3733068..3733109,3791474..3791722,3797615..3797752,3797994..3798047,3800116..3800413))
location: region:3689883-3800413:-1
so has part: feature:3800116-3800413:-1:exon
so has part: feature:3797994-3798047:-1:exon
so has part: feature:3797615-3797752:-1:exon
so has part: feature:3791474-3791722:-1:exon
so has part: feature:3733068-3733109:-1:exon
so has part: feature:3732824-3732951:-1:exon
so has part: feature:3721194-3721422:-1:exon
so has part: feature:3696353-3696466:-1:exon
so has part: feature:3692608-3693166:-1:exon
so has part: feature:3691637-3691711:-1:exon
so has part: feature:3689883-3690140:-1:exon

position:3800413:-1
position: 3800413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3800116-3800413:-1:exon

position:3800116:-1
position: 3800116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3797994-3798047:-1:exon

position:3797994:-1
position: 3797994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3798047:-1
position: 3798047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3797615-3797752:-1:exon

position:3797615:-1
position: 3797615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3797752:-1
position: 3797752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3791474-3791722:-1:exon

position:3791474:-1
position: 3791474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3791722:-1
position: 3791722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3733068-3733109:-1:exon

position:3733068:-1
position: 3733068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3733109:-1
position: 3733109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3732824-3732951:-1:exon

position:3732824:-1
position: 3732824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3732951:-1
position: 3732951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3721194-3721422:-1:exon

position:3721194:-1
position: 3721194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3721422:-1
position: 3721422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3696353-3696466:-1:exon

position:3696353:-1
position: 3696353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3696466:-1
position: 3696466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3692608-3693166:-1:exon

position:3692608:-1
position: 3692608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3693166:-1
position: 3693166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3691637-3691711:-1:exon

position:3691637:-1
position: 3691637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3691711:-1
position: 3691711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3689883-3690140:-1:exon

position:3690140:-1
position: 3690140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Neto1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Neto1
product: neuropilin and tolloid like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 18 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034518629.1
SIO_010081: Neto1
subclass of: SO_0000673
so part of: Neto1
location: complement(join(3690454..3690814,3691637..3691711,3692608..3693166,3696353..3696466,3721194..3721422,3732824..3732951,3733068..3733109,3791474..3791722,3797615..3797752,3797994..3798047,3800116..3801132))
location: region:3690454-3801132:-1
so has part: feature:3800116-3801132:-1:exon
so has part: feature:3797994-3798047:-1:exon
so has part: feature:3797615-3797752:-1:exon
so has part: feature:3791474-3791722:-1:exon
so has part: feature:3733068-3733109:-1:exon
so has part: feature:3732824-3732951:-1:exon
so has part: feature:3721194-3721422:-1:exon
so has part: feature:3696353-3696466:-1:exon
so has part: feature:3692608-3693166:-1:exon
so has part: feature:3691637-3691711:-1:exon
so has part: feature:3690454-3690814:-1:exon

position:3690454:-1
position: 3690454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3800116-3801132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3797994-3798047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3797615-3797752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3791474-3791722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3733068-3733109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3732824-3732951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3721194-3721422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696353-3696466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3692608-3693166:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3691637-3691711:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3690454-3690814:-1:exon

position:3690814:-1
position: 3690814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Neto1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Neto1
product: neuropilin and tolloid like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034518631.1
SIO_010081: Neto1
subclass of: SO_0000673
so part of: Neto1
location: complement(join(3690918..3690961,3691637..3691711,3692608..3693166,3696353..3696466,3721194..3721422,3732824..3732951,3733068..3733109,3791474..3791722,3797615..3797752,3797994..3798047,3800116..3800413))
location: region:3690918-3800413:-1
so has part: feature:3800116-3800413:-1:exon
so has part: feature:3797994-3798047:-1:exon
so has part: feature:3797615-3797752:-1:exon
so has part: feature:3791474-3791722:-1:exon
so has part: feature:3733068-3733109:-1:exon
so has part: feature:3732824-3732951:-1:exon
so has part: feature:3721194-3721422:-1:exon
so has part: feature:3696353-3696466:-1:exon
so has part: feature:3692608-3693166:-1:exon
so has part: feature:3691637-3691711:-1:exon
so has part: feature:3690918-3690961:-1:exon

position:3690918:-1
position: 3690918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3800116-3800413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3797994-3798047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3797615-3797752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3791474-3791722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3733068-3733109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3732824-3732951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3721194-3721422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696353-3696466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3692608-3693166:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3691637-3691711:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3690918-3690961:-1:exon

position:3690961:-1
position: 3690961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Neto1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Neto1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1
translation: MIYGRSLFHIIASLIILHSSGATKKGTEKQITPETQKSVQCGTWTKHAEGGVFTSPNYPSKYPPDRECVYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPACEFEMGGPEGIVESIQILKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKTSLLDQLTNTSGTVIGVTSCIVIILIIVSVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVAEDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASILAEIPTQPVKPLIPPVNRRNILVMKHNYSQDAADACDIDEIEEVPTTSHRLSRHEKSVQRFCLIGSLSKHESEYNTTRV
SIO_010081: Neto1
subclass of: SO_0000673
so part of: Neto1
location: complement(join(3691651..3691711,3692608..3693166,3696353..3696466,3721194..3721422,3732824..3732951,3733068..3733109,3791474..3791722,3797615..3797752,3797994..3798047,3800116..3800143))
location: region:3691651-3800143:-1
so has part: feature:3800116-3800143:-1:exon
so has part: feature:3797994-3798047:-1:exon
so has part: feature:3797615-3797752:-1:exon
so has part: feature:3791474-3791722:-1:exon
so has part: feature:3733068-3733109:-1:exon
so has part: feature:3732824-3732951:-1:exon
so has part: feature:3721194-3721422:-1:exon
so has part: feature:3696353-3696466:-1:exon
so has part: feature:3692608-3693166:-1:exon
so has part: feature:3691651-3691711:-1:exon

XP_034374520.1
type: Protein
SIO_000068: ncbiprotein

position:3691651:-1
position: 3691651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3800143:-1
position: 3800143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3800116-3800143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3797994-3798047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3797615-3797752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3791474-3791722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3733068-3733109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3732824-3732951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3721194-3721422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696353-3696466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3692608-3693166:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3691651-3691711:-1:exon

Neto1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Neto1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1
translation: MIYGRSLFHIIASLIILHSSGATKKGTEKQITPETQKSVQCGTWTKHAEGGVFTSPNYPSKYPPDRECVYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPACEFEMGGPEGIVESIQILKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKTSLLDQLTNTSGTVIGVTSCIVIILIIVSVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVAEDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASILAEIPTQPVKPLIPPVNRRNILVMKHNYSQDAADACDIDEIEEVPTTSHRLSRHEKSVQRFCLIGSLSKHESEYNTTRV
SIO_010081: Neto1
subclass of: SO_0000673
so part of: Neto1
location: complement(join(3691651..3691711,3692608..3693166,3696353..3696466,3721194..3721422,3732824..3732951,3733068..3733109,3791474..3791722,3797615..3797752,3797994..3798047,3800116..3800143))
location: region:3691651-3800143:-1
so has part: feature:3800116-3800143:-1:exon
so has part: feature:3797994-3798047:-1:exon
so has part: feature:3797615-3797752:-1:exon
so has part: feature:3791474-3791722:-1:exon
so has part: feature:3733068-3733109:-1:exon
so has part: feature:3732824-3732951:-1:exon
so has part: feature:3721194-3721422:-1:exon
so has part: feature:3696353-3696466:-1:exon
so has part: feature:3692608-3693166:-1:exon
so has part: feature:3691651-3691711:-1:exon

XP_034374522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3800116-3800143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3797994-3798047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3797615-3797752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3791474-3791722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3733068-3733109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3732824-3732951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3721194-3721422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696353-3696466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3692608-3693166:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3691651-3691711:-1:exon

Neto1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Neto1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropilin and tolloid-like protein 1
translation: MIYGRSLFHIIASLIILHSSGATKKGTEKQITPETQKSVQCGTWTKHAEGGVFTSPNYPSKYPPDRECVYIIEAAPRQCIELYFDEKYSIEPSWECKFDHIEVRDGPFGFSPIIGRFCGQQNPPVIKSSGRFLWIKFFADGELESMGFSARYNFTPDPDFKDLGVLKPLPACEFEMGGPEGIVESIQILKEGKASASEAVDCKWYIRAPPRSKIYLRFLDYEMQNSNECKRNFVAVYDGSSSVEDLKAKFCSTVANDVMLRTGLGVIRMWADEGSRNSRFQMLFTSFQEPPCEGNTFFCHSNMCINNTLVCNGLQNCVYPWDENHCKEKRKTSLLDQLTNTSGTVIGVTSCIVIILIIVSVIVQIKQPRKKYVQRKSDFDQTVFQEVFEPPHYELCTLRGTGATADFADVAEDFENYHKLRRSSSKCIHDHHCGSQLSSAKGSRSNLSTRDASILAEIPTQPVKPLIPPVNRRNILVMKHNYSQDAADACDIDEIEEVPTTSHRLSRHEKSVQRFCLIGSLSKHESEYNTTRV
SIO_010081: Neto1
subclass of: SO_0000673
so part of: Neto1
location: complement(join(3691651..3691711,3692608..3693166,3696353..3696466,3721194..3721422,3732824..3732951,3733068..3733109,3791474..3791722,3797615..3797752,3797994..3798047,3800116..3800143))
location: region:3691651-3800143:-1
so has part: feature:3800116-3800143:-1:exon
so has part: feature:3797994-3798047:-1:exon
so has part: feature:3797615-3797752:-1:exon
so has part: feature:3791474-3791722:-1:exon
so has part: feature:3733068-3733109:-1:exon
so has part: feature:3732824-3732951:-1:exon
so has part: feature:3721194-3721422:-1:exon
so has part: feature:3696353-3696466:-1:exon
so has part: feature:3692608-3693166:-1:exon
so has part: feature:3691651-3691711:-1:exon

XP_034374523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3800116-3800143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3797994-3798047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3797615-3797752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3791474-3791722:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3733068-3733109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3732824-3732951:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3721194-3721422:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3696353-3696466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3692608-3693166:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3691651-3691711:-1:exon

LOC117720263
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720263
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4528996..4529095
location: region:4528996-4529095:1
so has part: feature:4528996-4529095:1:exon

117720263
type: Gene
SIO_000068: ncbigene

position:4528996:1
position: 4528996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4529095:1
position: 4529095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4528996-4529095:1:exon

LOC117720263
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720263
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117720263
subclass of: SO_0000673
so part of: LOC117720263
location: 4528996..4529095
location: region:4528996-4529095:1
so has part: feature:4528996-4529095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4528996-4529095:1:exon

Fbxo15
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Fbxo15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4964475..5008664)
location: region:4964475-5008664:-1
so has part: feature:4964475-5008664:-1:exon
subclass of: SO_0000010

117719885
type: Gene
SIO_000068: ncbigene

position:4964475:-1
position: 4964475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5008664:-1
position: 5008664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4964475-5008664:-1:exon

Fbxo15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fbxo15
product: F-box protein 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034518284.1
SIO_010081: Fbxo15
subclass of: SO_0000673
so part of: Fbxo15
location: complement(join(4964475..4964836,4969817..4969941,4988883..4989025,4990351..4990433,4993330..4993456,4994371..4994568,4995135..4995377,4999075..4999179,5000105..5000215,5008230..5008664))
location: region:4964475-5008664:-1
so has part: feature:5008230-5008664:-1:exon
so has part: feature:5000105-5000215:-1:exon
so has part: feature:4999075-4999179:-1:exon
so has part: feature:4995135-4995377:-1:exon
so has part: feature:4994371-4994568:-1:exon
so has part: feature:4993330-4993456:-1:exon
so has part: feature:4990351-4990433:-1:exon
so has part: feature:4988883-4989025:-1:exon
so has part: feature:4969817-4969941:-1:exon
so has part: feature:4964475-4964836:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5008230-5008664:-1:exon

position:5008230:-1
position: 5008230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5000105-5000215:-1:exon

position:5000105:-1
position: 5000105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5000215:-1
position: 5000215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4999075-4999179:-1:exon

position:4999075:-1
position: 4999075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4999179:-1
position: 4999179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4995135-4995377:-1:exon

position:4995135:-1
position: 4995135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4995377:-1
position: 4995377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4994371-4994568:-1:exon

position:4994371:-1
position: 4994371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4994568:-1
position: 4994568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4993330-4993456:-1:exon

position:4993330:-1
position: 4993330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4993456:-1
position: 4993456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4990351-4990433:-1:exon

position:4990351:-1
position: 4990351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4990433:-1
position: 4990433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4988883-4989025:-1:exon

position:4988883:-1
position: 4988883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4989025:-1
position: 4989025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4969817-4969941:-1:exon

position:4969817:-1
position: 4969817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4969941:-1
position: 4969941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4964475-4964836:-1:exon

position:4964836:-1
position: 4964836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fbxo15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fbxo15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 15
translation: MTGRRERSRARDCPERCSCSKGGGGDRETQPTHARARSRFCARVRGSAAVFCPAARRKGSGVKFARGSSVMRQYPRRGQHSEKPFSISFMSLDRMPSEILLNIFSYLDVVTLLNIGCVNRRFYHLANDNLIWVKIYSAAFTSKRSHWKVTSVEETATCVSLLSVEDKEVGYWKKQYITKQISSVKAALTHIVKPVNPYTGLPVKTKEALRISGLGWAIILREKDGKEHIMKHADLSLNDTSVTVVWHGKYWPHLATLSTLDLYGVTPLFMDPDPNGPRWLSLIGKYDLSNLSTSTMVGCDRLVRIFCLNPGLLVGLWQKEDGLAFVMANLHFHQLVERSTLGSATLPYAPPPHSPFVDDSPEYGLQGYQLHIDMHGGGIFYLCSTFRNLFSRRGYIENGYVKFEVICLKNNREHLPLIGKVGLAWRTNVFDGFIESCSVVDVTLLDEHKKPFWCVSSPVCMKSAAYSSDGPNFLGHTYYVDYMDTEGGLHAELVWIEETEEYFIVSLAIYLSVAKINHWFGTKY
SIO_010081: Fbxo15
subclass of: SO_0000673
so part of: Fbxo15
location: complement(join(4964567..4964836,4969817..4969941,4988883..4989025,4990351..4990433,4993330..4993456,4994371..4994568,4995135..4995377,4999075..4999179,5000105..5000215,5008230..5008399))
location: region:4964567-5008399:-1
so has part: feature:5008230-5008399:-1:exon
so has part: feature:5000105-5000215:-1:exon
so has part: feature:4999075-4999179:-1:exon
so has part: feature:4995135-4995377:-1:exon
so has part: feature:4994371-4994568:-1:exon
so has part: feature:4993330-4993456:-1:exon
so has part: feature:4990351-4990433:-1:exon
so has part: feature:4988883-4989025:-1:exon
so has part: feature:4969817-4969941:-1:exon
so has part: feature:4964567-4964836:-1:exon

XP_034374175.1
type: Protein
SIO_000068: ncbiprotein

position:4964567:-1
position: 4964567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5008399:-1
position: 5008399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5008230-5008399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5000105-5000215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4999075-4999179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4995135-4995377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4994371-4994568:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4993330-4993456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4990351-4990433:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4988883-4989025:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4969817-4969941:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4964567-4964836:-1:exon

Timm21
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Timm21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5008714..5013252
location: region:5008714-5013252:1
so has part: feature:5008714-5013252:1:exon
subclass of: SO_0000010

117719553
type: Gene
SIO_000068: ncbigene

position:5008714:1
position: 5008714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5013252:1
position: 5013252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5008714-5013252:1:exon

Timm21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Timm21
product: translocase of inner mitochondrial membrane 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034517710.1
SIO_010081: Timm21
subclass of: SO_0000673
so part of: Timm21
location: join(5008714..5009358,5010975..5011037,5011130..5011227,5012512..5012585,5012669..5012774,5012861..5013252)
location: region:5008714-5013252:1
so has part: feature:5008714-5009358:1:exon
so has part: feature:5010975-5011037:1:exon
so has part: feature:5011130-5011227:1:exon
so has part: feature:5012512-5012585:1:exon
so has part: feature:5012669-5012774:1:exon
so has part: feature:5012861-5013252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5008714-5009358:1:exon

position:5009358:1
position: 5009358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5010975-5011037:1:exon

position:5010975:1
position: 5010975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5011037:1
position: 5011037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5011130-5011227:1:exon

position:5011130:1
position: 5011130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5011227:1
position: 5011227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5012512-5012585:1:exon

position:5012512:1
position: 5012512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5012585:1
position: 5012585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5012669-5012774:1:exon

position:5012669:1
position: 5012669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5012774:1
position: 5012774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5012861-5013252:1:exon

position:5012861:1
position: 5012861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Timm21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Timm21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim21
translation: MNMICAFLRVIQHAEKLHGSLGKQLLLPHFVLTKACLKTQPLKWGLREQKKTVQPRTVLGASQKTFWTQGPDPRKAKEDSSKDVSIRRNQKEETGISTSQKVKEAGRDVTYLIVVLFGVSITGGLLYTIFKELFSSSSPNIIYGKALGKCRSHPEVLGVFGEPVKGYGEMSRRGRRQHVSFVEYVNDGLKRIRVKFYIQGSEPGKQGTVHAEVEENPGSGKFEFRYIFVEVTPTRSIIVEDNRSQQS
SIO_010081: Timm21
subclass of: SO_0000673
so part of: Timm21
location: join(5009055..5009358,5010975..5011037,5011130..5011227,5012512..5012585,5012669..5012774,5012861..5012959)
location: region:5009055-5012959:1
so has part: feature:5009055-5009358:1:exon
so has part: feature:5010975-5011037:1:exon
so has part: feature:5011130-5011227:1:exon
so has part: feature:5012512-5012585:1:exon
so has part: feature:5012669-5012774:1:exon
so has part: feature:5012861-5012959:1:exon

XP_034373601.1
type: Protein
SIO_000068: ncbiprotein

position:5009055:1
position: 5009055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5012959:1
position: 5012959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5009055-5009358:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5010975-5011037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5011130-5011227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5012512-5012585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5012669-5012774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5012861-5012959:1:exon

LOC117720228
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720228
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5088320..5121078)
location: region:5088320-5121078:-1
so has part: feature:5088320-5121078:-1:exon
subclass of: SO_0000010

117720228
type: Gene
SIO_000068: ncbigene

position:5088320:-1
position: 5088320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5121078:-1
position: 5121078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5088320-5121078:-1:exon

LOC117720228
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117720228
product: cytochrome b5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 long SRA reads, 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518715.1
SIO_010081: LOC117720228
subclass of: SO_0000673
so part of: LOC117720228
location: complement(join(5088320..5088682,5090394..5090428,5095160..5095189,5096682..5096810,5120813..5121078))
location: region:5088320-5121078:-1
so has part: feature:5120813-5121078:-1:exon
so has part: feature:5096682-5096810:-1:exon
so has part: feature:5095160-5095189:-1:exon
so has part: feature:5090394-5090428:-1:exon
so has part: feature:5088320-5088682:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5120813-5121078:-1:exon

position:5120813:-1
position: 5120813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5096682-5096810:-1:exon

position:5096682:-1
position: 5096682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5096810:-1
position: 5096810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5095160-5095189:-1:exon

position:5095160:-1
position: 5095160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5095189:-1
position: 5095189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5090394-5090428:-1:exon

position:5090394:-1
position: 5090394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5090428:-1
position: 5090428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5088320-5088682:-1:exon

position:5088682:-1
position: 5088682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117720228
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117720228
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5
translation: MAGQSDKDVKYYTLEEIQKHKDSRSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTYIIGELHPDDRSKIAKPSDTLITTVESNSSWWTNWVIPAVTALTVALMYRLYMAED
SIO_010081: LOC117720228
subclass of: SO_0000673
so part of: LOC117720228
location: complement(join(5088601..5088682,5090394..5090428,5095160..5095189,5096682..5096810,5120813..5120941))
location: region:5088601-5120941:-1
so has part: feature:5120813-5120941:-1:exon
so has part: feature:5096682-5096810:-1:exon
so has part: feature:5095160-5095189:-1:exon
so has part: feature:5090394-5090428:-1:exon
so has part: feature:5088601-5088682:-1:exon

XP_034374606.1
type: Protein
SIO_000068: ncbiprotein

position:5088601:-1
position: 5088601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5120941:-1
position: 5120941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5120813-5120941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5096682-5096810:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5095160-5095189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5090394-5090428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5088601-5088682:-1:exon

C14H18orf63
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: C14H18orf63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5135077..5169448
location: region:5135077-5169448:1
so has part: feature:5135077-5169448:1:exon
subclass of: SO_0000010

117720062
type: Gene
SIO_000068: ncbigene

position:5135077:1
position: 5135077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5169448:1
position: 5169448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5135077-5169448:1:exon

C14H18orf63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C14H18orf63
product: chromosome 14 C18orf63 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_034518528.1
SIO_010081: C14H18orf63
subclass of: SO_0000673
so part of: C14H18orf63
location: join(5135077..5135210,5136270..5136348,5137791..5137847,5141599..5141710,5142262..5142303,5143624..5143700,5147671..5147780,5154571..5154667,5154765..5154850,5156415..5156598,5167461..5168471,5169365..5169448)
location: region:5135077-5169448:1
so has part: feature:5135077-5135210:1:exon
so has part: feature:5136270-5136348:1:exon
so has part: feature:5137791-5137847:1:exon
so has part: feature:5141599-5141710:1:exon
so has part: feature:5142262-5142303:1:exon
so has part: feature:5143624-5143700:1:exon
so has part: feature:5147671-5147780:1:exon
so has part: feature:5154571-5154667:1:exon
so has part: feature:5154765-5154850:1:exon
so has part: feature:5156415-5156598:1:exon
so has part: feature:5167461-5168471:1:exon
so has part: feature:5169365-5169448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5135077-5135210:1:exon

position:5135210:1
position: 5135210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5136270-5136348:1:exon

position:5136270:1
position: 5136270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5136348:1
position: 5136348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5137791-5137847:1:exon

position:5137791:1
position: 5137791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5137847:1
position: 5137847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5141599-5141710:1:exon

position:5141599:1
position: 5141599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5141710:1
position: 5141710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5142262-5142303:1:exon

position:5142262:1
position: 5142262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5142303:1
position: 5142303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5143624-5143700:1:exon

position:5143624:1
position: 5143624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5143700:1
position: 5143700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5147671-5147780:1:exon

position:5147671:1
position: 5147671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5147780:1
position: 5147780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5154571-5154667:1:exon

position:5154571:1
position: 5154571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5154667:1
position: 5154667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5154765-5154850:1:exon

position:5154765:1
position: 5154765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5154850:1
position: 5154850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5156415-5156598:1:exon

position:5156415:1
position: 5156415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5156598:1
position: 5156598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5167461-5168471:1:exon

position:5167461:1
position: 5167461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5168471:1
position: 5168471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5169365-5169448:1:exon

position:5169365:1
position: 5169365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C14H18orf63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C14H18orf63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C18orf63 homolog
translation: MSESKPQSLFFIILPDLHKLCAVQIILSSSVEELDIRSTQIKMCRQLLLLHEDILTAPVPGILNQISIVMSIPFFKSGRLNAYIEKYGAKMEAPQRVTPAILQNCLSYSLTAKLAPAWNRTGHLLVQGRDFLSNMGKQSAVVLDINVTETQVCLSIEVYTIRLPPPELQEFDISQHIIEDFHTNQNAIIERHSILSNWCYILPSMKMGQIINILHTAPPDCPFHSFEDFQRHWDDLYGYKLPEDCGDMKIYCSIHFKMMNKRTFTYPLSCIRSQPIQFFPRVDLDGVLKSFLSDLKSKLPHLCGYPIKMTNKPCYYTQELSRPQLQENKVKPSNLTTKKLFRASLTQATLVKPTRALNFIPQSRATEHKVQPSVSHQRSGLFSAGCHQPGSLQDRKPPWPLKAPGLHLEESELSRENTQVGSTNLCLQSNRAPAFIPVFQRKSEQVNKNISALSTLKRKQSGVIESTILAQETSVTQGGKPSLGTATRKRPNSSSIRVLAENLNQKGSKPLQEKGTKFYNRKKEQASSDVRQTVHLREARPLSTSAMTQMSSNSLAVMKNNVDIHTGGKDNLTSRFITQILGKSHESLKLKSQPHIFESDLETEDFQLQQQQLANQIKEANAAEHSLIESRASHSRRQKLCLESSRASTKRRSDAAHQRHKNQVSNTAKPKNSFNISEAEYSVEQRLSTR
SIO_010081: C14H18orf63
subclass of: SO_0000673
so part of: C14H18orf63
location: join(5135077..5135210,5136270..5136348,5137791..5137847,5141599..5141710,5142262..5142303,5143624..5143700,5147671..5147780,5154571..5154667,5154765..5154850,5156415..5156598,5167461..5168471,5169365..5169448)
location: region:5135077-5169448:1
so has part: feature:5135077-5135210:1:exon
so has part: feature:5136270-5136348:1:exon
so has part: feature:5137791-5137847:1:exon
so has part: feature:5141599-5141710:1:exon
so has part: feature:5142262-5142303:1:exon
so has part: feature:5143624-5143700:1:exon
so has part: feature:5147671-5147780:1:exon
so has part: feature:5154571-5154667:1:exon
so has part: feature:5154765-5154850:1:exon
so has part: feature:5156415-5156598:1:exon
so has part: feature:5167461-5168471:1:exon
so has part: feature:5169365-5169448:1:exon

XP_034374419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5135077-5135210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5136270-5136348:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5137791-5137847:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5141599-5141710:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5142262-5142303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5143624-5143700:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5147671-5147780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5154571-5154667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5154765-5154850:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5156415-5156598:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5167461-5168471:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5169365-5169448:1:exon

Dipk1c
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Dipk1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5224449..5250775)
location: region:5224449-5250775:-1
so has part: feature:5224449-5250775:-1:exon
subclass of: SO_0000010

117719546
type: Gene
SIO_000068: ncbigene

position:5224449:-1
position: 5224449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5250775:-1
position: 5250775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5224449-5250775:-1:exon

Dipk1c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dipk1c
product: divergent protein kinase domain 1C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034517669.1
SIO_010081: Dipk1c
subclass of: SO_0000673
so part of: Dipk1c
location: complement(join(5224449..5224459,5230664..5230919,5233743..5233907,5239389..5240048,5250587..5250775))
location: region:5224449-5250775:-1
so has part: feature:5250587-5250775:-1:exon
so has part: feature:5239389-5240048:-1:exon
so has part: feature:5233743-5233907:-1:exon
so has part: feature:5230664-5230919:-1:exon
so has part: feature:5224449-5224459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5250587-5250775:-1:exon

position:5250587:-1
position: 5250587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5239389-5240048:-1:exon

position:5239389:-1
position: 5239389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5240048:-1
position: 5240048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5233743-5233907:-1:exon

position:5233743:-1
position: 5233743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5233907:-1
position: 5233907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5230664-5230919:-1:exon

position:5230664:-1
position: 5230664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5230919:-1
position: 5230919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5224449-5224459:-1:exon

position:5224459:-1
position: 5224459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117720238
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720238
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 5227845..5227993
location: region:5227845-5227993:1
so has part: feature:5227845-5227993:1:exon

117720238
type: Gene
SIO_000068: ncbigene

position:5227845:1
position: 5227845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5227993:1
position: 5227993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5227845-5227993:1:exon

LOC117720238
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720238
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117720238
subclass of: SO_0000673
so part of: LOC117720238
location: 5227845..5227993
location: region:5227845-5227993:1
so has part: feature:5227845-5227993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5227845-5227993:1:exon

Dipk1c
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dipk1c
product: divergent protein kinase domain 1C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034517668.1
SIO_010081: Dipk1c
subclass of: SO_0000673
so part of: Dipk1c
location: complement(join(5229891..5230919,5233743..5233907,5239389..5240048,5250587..5250775))
location: region:5229891-5250775:-1
so has part: feature:5250587-5250775:-1:exon
so has part: feature:5239389-5240048:-1:exon
so has part: feature:5233743-5233907:-1:exon
so has part: feature:5229891-5230919:-1:exon

position:5229891:-1
position: 5229891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5250587-5250775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5239389-5240048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5233743-5233907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5229891-5230919:-1:exon

Dipk1c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dipk1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 1C
translation: MARAAGARGRAARCGLWRRGALLAFAAWTAGWVLAAALLLRAHPSVLSERCTDEKSRRILAALCQDYRGGWLTGALCEDLCVGGELLYQRCLYYERGKKVLQAQWRGRTVVLKSKREAFSSFPPLNLLEEEAGPGAPGIPEAELLLMVAGEVKNTLGLELPNNSIAPLWPARQGPGWRQQLASAWSLLQQEEYVYFSLLPDLSRHILPVLGSCGHFYAVEYLAAGSPHHKALFPLDDAGQAQAISHIALSFLDMVSHFDSDFSHRLHLCDVKPENFAIKRDFTVVAIDVDMAFFEPKMREILEQNCTGDEDCNFFDCFSKCDLRVNKCGARRVNTNLQVICDKIFRHWFSSTHRSPAISPQLQLQLQQAVQECAHHGGPSGNSWTASSSVFWKLRWLLQATLKELQEVEK
SIO_010081: Dipk1c
subclass of: SO_0000673
so part of: Dipk1c
location: complement(join(5230701..5230919,5233743..5233907,5239389..5240048,5250587..5250775))
location: region:5230701-5250775:-1
so has part: feature:5250587-5250775:-1:exon
so has part: feature:5239389-5240048:-1:exon
so has part: feature:5233743-5233907:-1:exon
so has part: feature:5230701-5230919:-1:exon

XP_034373559.1
type: Protein
SIO_000068: ncbiprotein

position:5230701:-1
position: 5230701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5250587-5250775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5239389-5240048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5233743-5233907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5230701-5230919:-1:exon

Dipk1c
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dipk1c
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 1C
translation: MARAAGARGRAARCGLWRRGALLAFAAWTAGWVLAAALLLRAHPSVLSERCTDEKSRRILAALCQDYRGGWLTGALCEDLCVGGELLYQRCLYYERGKKVLQAQWRGRTVVLKSKREAFSSFPPLNLLEEEAGPGAPGIPEAELLLMVAGEVKNTLGLELPNNSIAPLWPARQGPGWRQQLASAWSLLQQEEYVYFSLLPDLSRHILPVLGSCGHFYAVEYLAAGSPHHKALFPLDDAGQAQAISHIALSFLDMVSHFDSDFSHRLHLCDVKPENFAIKRDFTVVAIDVDMAFFEPKMREILEQNCTGDEDCNFFDCFSKCDLRVNKCGARRVNTNLQVICDKIFRHWFSSTHRSPAISPQLQLQLQQAVQECAHHGGPSGNSWTASSSVFWKLRWLLQATLKELQEVEK
SIO_010081: Dipk1c
subclass of: SO_0000673
so part of: Dipk1c
location: complement(join(5230701..5230919,5233743..5233907,5239389..5240048,5250587..5250775))
location: region:5230701-5250775:-1
so has part: feature:5250587-5250775:-1:exon
so has part: feature:5239389-5240048:-1:exon
so has part: feature:5233743-5233907:-1:exon
so has part: feature:5230701-5230919:-1:exon

XP_034373560.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5250587-5250775:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5239389-5240048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5233743-5233907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5230701-5230919:-1:exon

Cndp2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Cndp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5284566..5301982
location: region:5284566-5301982:1
so has part: feature:5284566-5301982:1:exon
subclass of: SO_0000010

117719866
type: Gene
SIO_000068: ncbigene

position:5284566:1
position: 5284566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5301982:1
position: 5301982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5284566-5301982:1:exon

Cndp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cndp2
product: carnosine dipeptidase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 1 long SRA read, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034518255.1
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5284566..5284664,5288110..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301982)
location: region:5284566-5301982:1
so has part: feature:5284566-5284664:1:exon
so has part: feature:5288110-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5284566-5284664:1:exon

position:5284664:1
position: 5284664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5288110-5288199:1:exon

position:5288110:1
position: 5288110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5288199:1
position: 5288199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5289181-5289324:1:exon

position:5289181:1
position: 5289181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5289324:1
position: 5289324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5290927-5291089:1:exon

position:5290927:1
position: 5290927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5291089:1
position: 5291089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5292417-5292505:1:exon

position:5292417:1
position: 5292417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5292505:1
position: 5292505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5294531-5294731:1:exon

position:5294531:1
position: 5294531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5294731:1
position: 5294731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5297394-5297478:1:exon

position:5297394:1
position: 5297394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5297478:1
position: 5297478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5298427-5298587:1:exon

position:5298427:1
position: 5298427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5298587:1
position: 5298587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5299200-5299364:1:exon

position:5299200:1
position: 5299200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5299364:1
position: 5299364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5300120-5300261:1:exon

position:5300120:1
position: 5300120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5300261:1
position: 5300261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5300472-5300619:1:exon

position:5300472:1
position: 5300472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5300619:1
position: 5300619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5301342-5301982:1:exon

position:5301342:1
position: 5301342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cndp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cndp2
product: carnosine dipeptidase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 3 long SRA reads, 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518256.1
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5284621..5284664,5285782..5285898,5288110..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301982)
location: region:5284621-5301982:1
so has part: feature:5284621-5284664:1:exon
so has part: feature:5285782-5285898:1:exon
so has part: feature:5288110-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301982:1:exon

position:5284621:1
position: 5284621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5284621-5284664:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5285782-5285898:1:exon

position:5285782:1
position: 5285782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5285898:1
position: 5285898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5288110-5288199:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5289181-5289324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5290927-5291089:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5292417-5292505:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5294531-5294731:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5297394-5297478:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5298427-5298587:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5299200-5299364:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5300120-5300261:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5300472-5300619:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5301342-5301982:1:exon

Cndp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cndp2
product: carnosine dipeptidase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034518254.1
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5284649..5284664,5288069..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301982)
location: region:5284649-5301982:1
so has part: feature:5284649-5284664:1:exon
so has part: feature:5288069-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301982:1:exon

position:5284649:1
position: 5284649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5284649-5284664:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5288069-5288199:1:exon

position:5288069:1
position: 5288069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5289181-5289324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5290927-5291089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5292417-5292505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5294531-5294731:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5297394-5297478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298427-5298587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5299200-5299364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5300120-5300261:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5300472-5300619:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5301342-5301982:1:exon

Cndp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cndp2
product: carnosine dipeptidase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 3 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518253.1
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5285670..5285898,5288069..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301982)
location: region:5285670-5301982:1
so has part: feature:5285670-5285898:1:exon
so has part: feature:5288069-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301982:1:exon

position:5285670:1
position: 5285670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5285670-5285898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5288069-5288199:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5289181-5289324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5290927-5291089:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5292417-5292505:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5294531-5294731:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5297394-5297478:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5298427-5298587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5299200-5299364:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5300120-5300261:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5300472-5300619:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5301342-5301982:1:exon

Cndp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cndp2
product: carnosine dipeptidase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 mRNAs, 2 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518251.1
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5287985..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301982)
location: region:5287985-5301982:1
so has part: feature:5287985-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301982:1:exon

position:5287985:1
position: 5287985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5287985-5288199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5289181-5289324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5290927-5291089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5292417-5292505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5294531-5294731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5297394-5297478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5298427-5298587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5299200-5299364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5300120-5300261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5300472-5300619:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5301342-5301982:1:exon

Cndp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cndp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSVLKTVFQYIEENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLISLMGCLIDKKGRILIPGINDAVAPVTDEECELYDHIDFDMEEFAKDVGAGTLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDMTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQLKN
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5288140..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301411)
location: region:5288140-5301411:1
so has part: feature:5288140-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301411:1:exon

XP_034374142.1
type: Protein
SIO_000068: ncbiprotein

position:5288140:1
position: 5288140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5301411:1
position: 5301411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5288140-5288199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5289181-5289324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5290927-5291089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5292417-5292505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5294531-5294731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5297394-5297478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5298427-5298587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5299200-5299364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5300120-5300261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5300472-5300619:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5301342-5301411:1:exon

Cndp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cndp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSVLKTVFQYIEENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLISLMGCLIDKKGRILIPGINDAVAPVTDEECELYDHIDFDMEEFAKDVGAGTLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDMTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQLKN
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5288140..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301411)
location: region:5288140-5301411:1
so has part: feature:5288140-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301411:1:exon

XP_034374144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5288140-5288199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5289181-5289324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5290927-5291089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5292417-5292505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5294531-5294731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5297394-5297478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5298427-5298587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5299200-5299364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5300120-5300261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5300472-5300619:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5301342-5301411:1:exon

Cndp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cndp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSVLKTVFQYIEENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLISLMGCLIDKKGRILIPGINDAVAPVTDEECELYDHIDFDMEEFAKDVGAGTLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDMTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQLKN
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5288140..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301411)
location: region:5288140-5301411:1
so has part: feature:5288140-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301411:1:exon

XP_034374145.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5288140-5288199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5289181-5289324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5290927-5291089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5292417-5292505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5294531-5294731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5297394-5297478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5298427-5298587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5299200-5299364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5300120-5300261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5300472-5300619:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5301342-5301411:1:exon

Cndp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cndp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSVLKTVFQYIEENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLISLMGCLIDKKGRILIPGINDAVAPVTDEECELYDHIDFDMEEFAKDVGAGTLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDMTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQLKN
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5288140..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301411)
location: region:5288140-5301411:1
so has part: feature:5288140-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301411:1:exon

XP_034374146.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5288140-5288199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5289181-5289324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5290927-5291089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5292417-5292505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5294531-5294731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5297394-5297478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5298427-5298587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5299200-5299364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5300120-5300261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5300472-5300619:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5301342-5301411:1:exon

Cndp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cndp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic non-specific dipeptidase
translation: MSVLKTVFQYIEENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLISLMGCLIDKKGRILIPGINDAVAPVTDEECELYDHIDFDMEEFAKDVGAGTLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGVEPDMTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEVSQLKN
SIO_010081: Cndp2
subclass of: SO_0000673
so part of: Cndp2
location: join(5288140..5288199,5289181..5289324,5290927..5291089,5292417..5292505,5294531..5294731,5297394..5297478,5298427..5298587,5299200..5299364,5300120..5300261,5300472..5300619,5301342..5301411)
location: region:5288140-5301411:1
so has part: feature:5288140-5288199:1:exon
so has part: feature:5289181-5289324:1:exon
so has part: feature:5290927-5291089:1:exon
so has part: feature:5292417-5292505:1:exon
so has part: feature:5294531-5294731:1:exon
so has part: feature:5297394-5297478:1:exon
so has part: feature:5298427-5298587:1:exon
so has part: feature:5299200-5299364:1:exon
so has part: feature:5300120-5300261:1:exon
so has part: feature:5300472-5300619:1:exon
so has part: feature:5301342-5301411:1:exon

XP_034374147.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5288140-5288199:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5289181-5289324:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5290927-5291089:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5292417-5292505:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5294531-5294731:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5297394-5297478:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5298427-5298587:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5299200-5299364:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5300120-5300261:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5300472-5300619:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5301342-5301411:1:exon

Cndp1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Cndp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5329411..5359489
location: region:5329411-5359489:1
so has part: feature:5329411-5359489:1:exon
subclass of: SO_0000010

117720154
type: Gene
SIO_000068: ncbigene

position:5329411:1
position: 5329411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5359489:1
position: 5359489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5329411-5359489:1:exon

Cndp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cndp1
product: carnosine dipeptidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518622.1
SIO_010081: Cndp1
subclass of: SO_0000673
so part of: Cndp1
location: join(5329411..5329512,5332174..5332323,5333700..5333862,5335973..5336061,5337876..5338076,5342150..5342234,5349380..5349540,5352409..5352573,5353848..5353989,5357566..5357713,5358698..5359489)
location: region:5329411-5359489:1
so has part: feature:5329411-5329512:1:exon
so has part: feature:5332174-5332323:1:exon
so has part: feature:5333700-5333862:1:exon
so has part: feature:5335973-5336061:1:exon
so has part: feature:5337876-5338076:1:exon
so has part: feature:5342150-5342234:1:exon
so has part: feature:5349380-5349540:1:exon
so has part: feature:5352409-5352573:1:exon
so has part: feature:5353848-5353989:1:exon
so has part: feature:5357566-5357713:1:exon
so has part: feature:5358698-5359489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5329411-5329512:1:exon

position:5329512:1
position: 5329512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5332174-5332323:1:exon

position:5332174:1
position: 5332174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5332323:1
position: 5332323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5333700-5333862:1:exon

position:5333700:1
position: 5333700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5333862:1
position: 5333862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5335973-5336061:1:exon

position:5335973:1
position: 5335973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5336061:1
position: 5336061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5337876-5338076:1:exon

position:5337876:1
position: 5337876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5338076:1
position: 5338076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5342150-5342234:1:exon

position:5342150:1
position: 5342150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5342234:1
position: 5342234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5349380-5349540:1:exon

position:5349380:1
position: 5349380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5349540:1
position: 5349540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5352409-5352573:1:exon

position:5352409:1
position: 5352409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5352573:1
position: 5352573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5353848-5353989:1:exon

position:5353848:1
position: 5353848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5353989:1
position: 5353989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5357566-5357713:1:exon

position:5357566:1
position: 5357566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5357713:1
position: 5357713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5358698-5359489:1:exon

position:5358698:1
position: 5358698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cndp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cndp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-Ala-His dipeptidase
translation: MFSSSPPHPGQLEKLFQYIDLHQDEFVQTLKEWVAIESDSVQPLPRLRQELFRMMALAADKLRNLGAGVDSVDLGSQQMPDGQSLPIPPIILAELGNDPKKPTVCFYGHLDVQPAQKDDGWLTDPYTLTEVDGKLYGRGATDNKGPVLAWINSVSTFRALQQDLPVNIKFILEGMEEVGSVALEELVRREKDHFFSSVDYIVISDNLWLSRRKPALTYGTRGNCYFMVEVKCRDQDFHSGTFGGVLNEPMADLVALLGSLVDSSGHILIPGIYDQMAPITEEERTMYKNIDLDLEEYQKNSQVEKFLFDTKEELLMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVLGKFSIRLVSPMTPSVVEKQVTQHLEAVFSKRNSFNKMAVSMVIGLHPWTANINDTQYLAAQRAIKTVFGVNPDMIQDGSTIPTAKIFQAITQKSVMMLPLGAVDDGEHSQNEKINRWNYIQGSKLFAAFFLELSKQHSGQQVPSSVF
SIO_010081: Cndp1
subclass of: SO_0000673
so part of: Cndp1
location: join(5329429..5329512,5332174..5332323,5333700..5333862,5335973..5336061,5337876..5338076,5342150..5342234,5349380..5349540,5352409..5352573,5353848..5353989,5357566..5357713,5358698..5358794)
location: region:5329429-5358794:1
so has part: feature:5329429-5329512:1:exon
so has part: feature:5332174-5332323:1:exon
so has part: feature:5333700-5333862:1:exon
so has part: feature:5335973-5336061:1:exon
so has part: feature:5337876-5338076:1:exon
so has part: feature:5342150-5342234:1:exon
so has part: feature:5349380-5349540:1:exon
so has part: feature:5352409-5352573:1:exon
so has part: feature:5353848-5353989:1:exon
so has part: feature:5357566-5357713:1:exon
so has part: feature:5358698-5358794:1:exon

XP_034374513.1
type: Protein
SIO_000068: ncbiprotein

position:5329429:1
position: 5329429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5358794:1
position: 5358794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5329429-5329512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5332174-5332323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5333700-5333862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5335973-5336061:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5337876-5338076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5342150-5342234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5349380-5349540:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5352409-5352573:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5353848-5353989:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5357566-5357713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5358698-5358794:1:exon

Znf407
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Znf407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5373616..5763095
location: region:5373616-5763095:1
so has part: feature:5373616-5763095:1:exon
subclass of: SO_0000010

117719939
type: Gene
SIO_000068: ncbigene

position:5373616:1
position: 5373616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5763095:1
position: 5763095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5373616-5763095:1:exon

Znf407
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf407
product: zinc finger protein 407
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518392.1
SIO_010081: Znf407
subclass of: SO_0000673
so part of: Znf407
location: join(5373616..5374377,5396516..5401203,5406622..5406736,5526939..5527013,5609469..5609635,5613173..5613256,5626180..5626300,5650131..5650309,5760691..5763095)
location: region:5373616-5763095:1
so has part: feature:5373616-5374377:1:exon
so has part: feature:5396516-5401203:1:exon
so has part: feature:5406622-5406736:1:exon
so has part: feature:5526939-5527013:1:exon
so has part: feature:5609469-5609635:1:exon
so has part: feature:5613173-5613256:1:exon
so has part: feature:5626180-5626300:1:exon
so has part: feature:5650131-5650309:1:exon
so has part: feature:5760691-5763095:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5373616-5374377:1:exon

position:5374377:1
position: 5374377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5396516-5401203:1:exon

position:5396516:1
position: 5396516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5401203:1
position: 5401203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5406622-5406736:1:exon

position:5406622:1
position: 5406622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5406736:1
position: 5406736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5526939-5527013:1:exon

position:5526939:1
position: 5526939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5527013:1
position: 5527013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5609469-5609635:1:exon

position:5609469:1
position: 5609469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5609635:1
position: 5609635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5613173-5613256:1:exon

position:5613173:1
position: 5613173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5613256:1
position: 5613256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5626180-5626300:1:exon

position:5626180:1
position: 5626180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5626300:1
position: 5626300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5650131-5650309:1:exon

position:5650131:1
position: 5650131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5650309:1
position: 5650309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5760691-5763095:1:exon

position:5760691:1
position: 5760691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Znf407
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 407
translation: MDSENKHENDEDESVKGAKDLRSVSSHDDSCGPVSDDIANASENFTSKRVFSESSNSDSITVEEDRNERASKRLRAEAVEPETREQGACGLGTAEVNVHLAELGKEAFPASFSEGGRALPNVFSSSSDFSTSNTLSLKADEVKKPAQEVVSLVPEKHTPSPPEGMSISCSFGSVETGLRCAVCGCSFPSCSALEKHVECHVEQGKECACCHCSHRAESSSSPHVHVRHTHGAQKVFSCDLCGFQCAEENLLNAHYLGKTHLRRQNLAARGGFVQILTKQSFPKKACVMGTKNVRTKPRASKPIARNGDSKGVQNPGSKFKDCREAPSEDSAGSSELLVEMVPSRKISSGKADVVEENVSFGVAQNPENHNKQLGGLVSSEGLFNKSESTKNALQTTHVSISITSRPRSERNLLMLGNSFRRRSGTFTLKGQAKKRFNLLGINKRGTNETQRMYMKHLRTQMRTNAQPVPEQIQMSRDVQSLCVTTSDNAQVMQDKTTSCLSGSTRLGSLPVKPADHQLSAQCTCTECGQIAANKTDFEIHVKKCHGREVHFHCQTCDFSSPLRRDLEEHLHSNQHQQMTPVLSCQCCSFISLNETNLRDHMKEKHDMGFFCTCCNLFLSEKDVEEHRATETHNSLVVQPKTASSLSSDPVLPLSTLESVNMADSREDSGKAAQEEPVESRASHGTEGRHSSKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFLCKACNLYSLSKEGMEKHIKRSKHLENAKKNNIGLSFEECIERVCIGANDKKEESSVSGCGRPEGHVGVRVQEHFEQSMLTPKELPQSGVSTKEDELGLATTPKRGRPKGSISRTCSHCGLLASSITNLTVHIRRKHSHQYSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIEANGKQSSDIIVGPEGGNLDACKKNTPLTVTIANEQPNKSAKLDRSALEKPVVDNGNAGEAEAGNVVHSVDGEVSSQLSDKKGQISPDTEDPLQHDDACSSDNKCLHCEFSAHSAASLELHVKRKHTKEFEFYCMACDYYAVTRREMTRHAATEKHKMKRQSYLSSSNVEAGSSEISKSITIPEEEHSQNSEEFQINPQQSSGTLQSRNPADCSILDDTTNLDMSKVLCTPDSVAVVTEQESNFSEDHSFCETLHLVKDKSVKPREIVSLNTSSNHSSPGCLQSENLASSAVDCETAKKSHDVLDDVGDTSTHCEDEGGSMDDSEGKILHKSPCPGDLDGGHSAESTSPVVMKIPREQLDLDVGGQNKVGCEQTSEDLKDVQANSILVNKEIVMNSQHEAEVILEEDAPTSNGTADSNDVYETIISIDDKGQTMYSFGKFDSSIIRIKTEDGELVEQPEEGLMVTAGRVSELPLKDCAQGLKKKKTEGSSFGESTRIRCDDCGFLADGLSGLNVHIAMKHPTKEKHFHCLLCGKSFYTESNLHQHLASAGHMRNEQASVEELPEGGATFKCVKCTEPFDSEQNLFLHIKGQHEELLREVNKYIVEDTEQINREREENQGNVCKYCGKMCRSSNSMAFLAHIRTHTGSKPFKCKICHFATAQLGDARNHVKRHLGMREYKCHVCGVAFVMKKHLNTHLLGKHGVGTPKERKFTCHLCDRSFTEKWALNNHMKLHTGEKPFKCTWPTCHYSFLTASAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGEKPFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCDYGTNVPVEFRNHLKEQHPDIENPDLAYLHAGIVSKSYECRLKGQGATFVETDSPFTASTLAEESPVKEKSLRSSKRQASSPEQVQQVIIIQGYDGEFALDASVEETAAATLQTLAMAGQVARVVHITEHGQVIATSQNGSHVGSVVPGPILPEQLTDGATQVVVMGGSMESHSVDEALSPGAAVIQQVTKQEVLSLSEAGVPPSDNSSALDALLCAVTELGEVESRAGHEEKGRPSHKDML…
SIO_010081: Znf407
subclass of: SO_0000673
so part of: Znf407
location: join(5396577..5401203,5406622..5406736,5526939..5527013,5609469..5609635,5613173..5613256,5626180..5626300,5650131..5650309,5760691..5762030)
location: region:5396577-5762030:1
so has part: feature:5396577-5401203:1:exon
so has part: feature:5406622-5406736:1:exon
so has part: feature:5526939-5527013:1:exon
so has part: feature:5609469-5609635:1:exon
so has part: feature:5613173-5613256:1:exon
so has part: feature:5626180-5626300:1:exon
so has part: feature:5650131-5650309:1:exon
so has part: feature:5760691-5762030:1:exon

XP_034374283.1
type: Protein
SIO_000068: ncbiprotein

position:5396577:1
position: 5396577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5762030:1
position: 5762030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5396577-5401203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5406622-5406736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5526939-5527013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5609469-5609635:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5613173-5613256:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5626180-5626300:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5650131-5650309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5760691-5762030:1:exon

Zadh2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Zadh2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5866540..5875975)
location: region:5866540-5875975:-1
so has part: feature:5866540-5875975:-1:exon
subclass of: SO_0000010

117719808
type: Gene
SIO_000068: ncbigene

position:5866540:-1
position: 5866540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5875975:-1
position: 5875975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5866540-5875975:-1:exon

Zadh2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Zadh2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 4 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518123.1
SIO_010081: Zadh2
subclass of: SO_0000673
so part of: Zadh2
location: complement(join(5866540..5869625,5875655..5875975))
location: region:5866540-5875975:-1
so has part: feature:5875655-5875975:-1:exon
so has part: feature:5866540-5869625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5875655-5875975:-1:exon

position:5875655:-1
position: 5875655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5866540-5869625:-1:exon

position:5869625:-1
position: 5869625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Zadh2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: Zadh2
product: zinc binding alcohol dehydrogenase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004608233.1
SIO_010081: Zadh2
so part of: Zadh2
location: complement(join(5866561..5866773,5868343..5869625,5875655..5875975))
location: region:5866561-5875975:-1
so has part: feature:5875655-5875975:-1:exon
so has part: feature:5868343-5869625:-1:exon
so has part: feature:5866561-5866773:-1:exon

position:5866561:-1
position: 5866561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5875655-5875975:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5868343-5869625:-1:exon

position:5868343:-1
position: 5868343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5866561-5866773:-1:exon

position:5866773:-1
position: 5866773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Zadh2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Zadh2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin reductase 3
translation: MLRLTAAGARAIVDMSYARHFLDFQGSAIPRTMQKLVVTRLSPNFHEAVTLRRDCPVPLPGDGDLLVRNRFVGINASDINYSAGHYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQPVAYVAPGSFAEYTVVPASIAIPVPSVKPEYLTMLVSGTTAYISLKELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKSAFLKSVGCDRPINYRTEPVETVLKQEYPEGVDIVYESVGGAMFDLAVDALATKGRLIVIGFISGYQNPTGLSPVKAGALPAKLLKKSASLRGFFLNHYFSKYQAAMEHLLELYTRGDLVCEVDRGHLAPDGRFVGLESIFQAIDYMYTGKNIGKLVVELPHPVSSKL
SIO_010081: Zadh2
subclass of: SO_0000673
so part of: Zadh2
location: complement(join(5868701..5869625,5875655..5875863))
location: region:5868701-5875863:-1
so has part: feature:5875655-5875863:-1:exon
so has part: feature:5868701-5869625:-1:exon

XP_034374014.1
type: Protein
SIO_000068: ncbiprotein

position:5868701:-1
position: 5868701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5875863:-1
position: 5875863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5875655-5875863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5868701-5869625:-1:exon

Tshz1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tshz1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5877506..5952264
location: region:5877506-5952264:1
so has part: feature:5877506-5952264:1:exon
subclass of: SO_0000010

117719778
type: Gene
SIO_000068: ncbigene

position:5877506:1
position: 5877506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5952264:1
position: 5952264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5877506-5952264:1:exon

Tshz1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tshz1
product: teashirt zinc finger homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 1 long SRA read, 14 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518078.1
SIO_010081: Tshz1
subclass of: SO_0000673
so part of: Tshz1
location: join(5877506..5878664,5947672..5952264)
location: region:5877506-5952264:1
so has part: feature:5877506-5878664:1:exon
so has part: feature:5947672-5952264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5877506-5878664:1:exon

position:5878664:1
position: 5878664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5947672-5952264:1:exon

position:5947672:1
position: 5947672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tshz1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tshz1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teashirt homolog 1
translation: MPRRKQQAPRRSAAYVPEEELKAAETDEEHVEDGGLSLDIQESEFVCNEETEIKEAQSYQNSPVSTATNQDAGYGSPFSEGSDQLAHFKSSSSREEKEEPQCPDSVSYPQDSLAQIKAVYANLFSESCWSSLALDLKKSSSTTSNNDASQKESSMPTPTPPTSTASTACTTATTAITSCSTSTSHSSATSNNSSSGYDWHQAALAKTLQQTSSYGLLPEPSLFSTVQLYRQNNKLYGSVFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNRDKDSEKTKRWSKPRKRSLMEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVPLKEPVPAITKLVPSTKKRALQDLASPCSPEPTGMATEVALSESAKDQKTANPYVTPNNRYGYQNGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTTSASKKGKQLVLDPVVEEKIQSIPLPPTTHTRLPASSIKKQPDSPAGSVASEEKKEPEKEKEKEKAPPAAGDAERKIKEETEDTTEKFEPTALYQYLREEDLDDSPKGGVDILKSLENTVSTAISKAQNGAPSWGGYPSIHAAYQLPGTVKPMQSAVQSVQIQPSYSSSVKSLSSTEHNALLHSPGSLTPPPHKSNVSAMEELVEKVTGKVSVKKEERPAEKEKTSPVKAISPVAKENKDLPKSEETGSKPQRKGSDSETGKAKRESTMDAHTPNGTEPLKAKVTNGCSNLGIITDHSPEPSFINPLSALQSIMNTHLGKVSKPVSPSLDPLAMLYKISNSMLDKPVYPTTPAKQADAIDRYYYENSDQPIDLTKSKNKPLVSGVADAVSSPLRESALMDISDMVKNLTGRLTPKSSTPSTVSEKSDADGSSFEEALDELSPVHKRKGRQSNWNPQHLLILQAQFASSLRETAEGKYIMSDLGPQERVHISKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDCASQFRTASTYISHLETHLGFSLKDLSKLPLSQIQEQQSVSKALSNKTLGPLGSSEEDLGSTFQCKLCNRTFASKHAVKLHLSKTHGKSPEDHLIYVTELEKQ
SIO_010081: Tshz1
subclass of: SO_0000673
so part of: Tshz1
location: join(5878625..5878664,5947672..5950883)
location: region:5878625-5950883:1
so has part: feature:5878625-5878664:1:exon
so has part: feature:5947672-5950883:1:exon

XP_034373969.1
type: Protein
SIO_000068: ncbiprotein

position:5878625:1
position: 5878625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5950883:1
position: 5950883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5878625-5878664:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5947672-5950883:1:exon

LOC117720282
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720282
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6593398..6593565
location: region:6593398-6593565:1
so has part: feature:6593398-6593565:1:exon
subclass of: SO_0000623

117720282
type: Gene
SIO_000068: ncbigene

position:6593398:1
position: 6593398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6593565:1
position: 6593565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6593398-6593565:1:exon

LOC117720282
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117720282
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004608297.1
SIO_010081: LOC117720282
subclass of: SO_0000673
so part of: LOC117720282
location: 6593398..6593565
location: region:6593398-6593565:1
so has part: feature:6593398-6593565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6593398-6593565:1:exon

Znf516
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Znf516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6908002..6997178)
location: region:6908002-6997178:-1
so has part: feature:6908002-6997178:-1:exon
subclass of: SO_0000010

117719677
type: Gene
SIO_000068: ncbigene

position:6908002:-1
position: 6908002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6997178:-1
position: 6997178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6908002-6997178:-1:exon

Znf516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf516
product: zinc finger protein 516, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034517853.1
SIO_010081: Znf516
subclass of: SO_0000673
so part of: Znf516
location: complement(join(6908002..6908862,6915807..6915874,6917091..6917195,6921692..6923146,6951092..6953017,6997113..6997178))
location: region:6908002-6997178:-1
so has part: feature:6997113-6997178:-1:exon
so has part: feature:6951092-6953017:-1:exon
so has part: feature:6921692-6923146:-1:exon
so has part: feature:6917091-6917195:-1:exon
so has part: feature:6915807-6915874:-1:exon
so has part: feature:6908002-6908862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6997113-6997178:-1:exon

position:6997113:-1
position: 6997113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6951092-6953017:-1:exon

position:6951092:-1
position: 6951092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6953017:-1
position: 6953017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6921692-6923146:-1:exon

position:6921692:-1
position: 6921692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6923146:-1
position: 6923146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6917091-6917195:-1:exon

position:6917091:-1
position: 6917091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6917195:-1
position: 6917195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6915807-6915874:-1:exon

position:6915807:-1
position: 6915807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6915874:-1
position: 6915874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6908002-6908862:-1:exon

position:6908862:-1
position: 6908862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Znf516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf516
product: zinc finger protein 516, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034517854.1
SIO_010081: Znf516
subclass of: SO_0000673
so part of: Znf516
location: complement(join(6908002..6908862,6915807..6915874,6917091..6917195,6921692..6923146,6951092..6953017,6996906..6996999))
location: region:6908002-6996999:-1
so has part: feature:6996906-6996999:-1:exon
so has part: feature:6951092-6953017:-1:exon
so has part: feature:6921692-6923146:-1:exon
so has part: feature:6917091-6917195:-1:exon
so has part: feature:6915807-6915874:-1:exon
so has part: feature:6908002-6908862:-1:exon

position:6996999:-1
position: 6996999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6996906-6996999:-1:exon

position:6996906:-1
position: 6996906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6951092-6953017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6921692-6923146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6917091-6917195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6915807-6915874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6908002-6908862:-1:exon

Znf516
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf516
product: zinc finger protein 516, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034517852.1
SIO_010081: Znf516
subclass of: SO_0000673
so part of: Znf516
location: complement(join(6908002..6908862,6915807..6915874,6917091..6917195,6921692..6923146,6951092..6953017,6993204..6993287))
location: region:6908002-6993287:-1
so has part: feature:6993204-6993287:-1:exon
so has part: feature:6951092-6953017:-1:exon
so has part: feature:6921692-6923146:-1:exon
so has part: feature:6917091-6917195:-1:exon
so has part: feature:6915807-6915874:-1:exon
so has part: feature:6908002-6908862:-1:exon

position:6993287:-1
position: 6993287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6993204-6993287:-1:exon

position:6993204:-1
position: 6993204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6951092-6953017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6921692-6923146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6917091-6917195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6915807-6915874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6908002-6908862:-1:exon

Znf516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516
translation: MDRSRETEMELRRGPSPPRASRSHEVDGDKAACHSCCICGKSFPFQSSLSQHMRKHTGEKPYKCPYCDHRASQKGNLKIHIRSHRTGTLIQGHEPEAGEAQLGEMRVSEGLDGCASPTKSTSACNRVLNGAVPMDGSKILLRSSRKEVEGAASAQEDTEATVPCSFCKSRFERKKDLELHVHQAHKPFKCRLCSYVTLREESLLSHIERDHITAQVPNGSEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPKSELDPIATINNVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRKVEASRIRAPAEEGDTEDPLNTKQFFLQCLNLTPYVAGDVSPSGQAGQRVAELDPVNSYQAWQLATRGKVAEPAEYLKYGTWDEALAGDVAFDKDKREYILVSQEKRKREQDAPSTQAPPRKRASVPGDPMLSGPIEPRPASRPNRRAAATTGQGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRDPEGDRAVRARCSSLSEGDSASQPSSPGSACATADSPGLAEEGVDDSGEEAVPEAASGGQPHLCCSSGEEAPTVLSNGDQSHKLGNDMPERDISEPKVGIATPSVSILENSSRETAKGPEQHKYSLDLKMPAFHSKQEVPSTTDRVDFPSSMEITSLQHPLDSQAGHSKDKLSDLHKEYCGVGKRASAPDLVPLDLSMKSSRREPSSKEACSLQEALVIHPCPYCNHKTYYPEVLWMHKRIWHRVSCSSVAPPWTQPSGHKSIRSNLVFLPRSGRTGPPPALGGKECQPLLVSRFTRTQVPGGVPGSKGSSSPLGVTTKAASMPKNKESHSGSPCALWASGPEGYRQTRAGHGQDPPSAAVQGPLAKPKPEASSRLAPSPGSGGLSRSATPTPSVITRVGAQPSANSKPVEKLGVPAVGTGFPPPNKHSAPDSLKAKFSPQPQGQPPSKGEGGSPLPPREPPVKVAQELRTLATCAAGSRGDAALQAPPGAPPTLHSTKQELAAEGQEKRLDILSVFKTYIPKDFTTLYQGWGVSNPGPEHRGTPRTQARQGDFVCVECGKSFQQPSQLRAHLRAHTVVFECDGPRDSEVHTASTDAPKQGRDHTTPGTVPAGPLRKGT
SIO_010081: Znf516
subclass of: SO_0000673
so part of: Znf516
location: complement(join(6908803..6908862,6915807..6915874,6917091..6917195,6921692..6923146,6951092..6952862))
location: region:6908803-6952862:-1
so has part: feature:6951092-6952862:-1:exon
so has part: feature:6921692-6923146:-1:exon
so has part: feature:6917091-6917195:-1:exon
so has part: feature:6915807-6915874:-1:exon
so has part: feature:6908803-6908862:-1:exon

XP_034373743.1
type: Protein
SIO_000068: ncbiprotein

position:6908803:-1
position: 6908803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6952862:-1
position: 6952862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6951092-6952862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6921692-6923146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6917091-6917195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6915807-6915874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6908803-6908862:-1:exon

Znf516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516
translation: MDRSRETEMELRRGPSPPRASRSHEVDGDKAACHSCCICGKSFPFQSSLSQHMRKHTGEKPYKCPYCDHRASQKGNLKIHIRSHRTGTLIQGHEPEAGEAQLGEMRVSEGLDGCASPTKSTSACNRVLNGAVPMDGSKILLRSSRKEVEGAASAQEDTEATVPCSFCKSRFERKKDLELHVHQAHKPFKCRLCSYVTLREESLLSHIERDHITAQVPNGSEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPKSELDPIATINNVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRKVEASRIRAPAEEGDTEDPLNTKQFFLQCLNLTPYVAGDVSPSGQAGQRVAELDPVNSYQAWQLATRGKVAEPAEYLKYGTWDEALAGDVAFDKDKREYILVSQEKRKREQDAPSTQAPPRKRASVPGDPMLSGPIEPRPASRPNRRAAATTGQGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRDPEGDRAVRARCSSLSEGDSASQPSSPGSACATADSPGLAEEGVDDSGEEAVPEAASGGQPHLCCSSGEEAPTVLSNGDQSHKLGNDMPERDISEPKVGIATPSVSILENSSRETAKGPEQHKYSLDLKMPAFHSKQEVPSTTDRVDFPSSMEITSLQHPLDSQAGHSKDKLSDLHKEYCGVGKRASAPDLVPLDLSMKSSRREPSSKEACSLQEALVIHPCPYCNHKTYYPEVLWMHKRIWHRVSCSSVAPPWTQPSGHKSIRSNLVFLPRSGRTGPPPALGGKECQPLLVSRFTRTQVPGGVPGSKGSSSPLGVTTKAASMPKNKESHSGSPCALWASGPEGYRQTRAGHGQDPPSAAVQGPLAKPKPEASSRLAPSPGSGGLSRSATPTPSVITRVGAQPSANSKPVEKLGVPAVGTGFPPPNKHSAPDSLKAKFSPQPQGQPPSKGEGGSPLPPREPPVKVAQELRTLATCAAGSRGDAALQAPPGAPPTLHSTKQELAAEGQEKRLDILSVFKTYIPKDFTTLYQGWGVSNPGPEHRGTPRTQARQGDFVCVECGKSFQQPSQLRAHLRAHTVVFECDGPRDSEVHTASTDAPKQGRDHTTPGTVPAGPLRKGT
SIO_010081: Znf516
subclass of: SO_0000673
so part of: Znf516
location: complement(join(6908803..6908862,6915807..6915874,6917091..6917195,6921692..6923146,6951092..6952862))
location: region:6908803-6952862:-1
so has part: feature:6951092-6952862:-1:exon
so has part: feature:6921692-6923146:-1:exon
so has part: feature:6917091-6917195:-1:exon
so has part: feature:6915807-6915874:-1:exon
so has part: feature:6908803-6908862:-1:exon

XP_034373744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6951092-6952862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6921692-6923146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6917091-6917195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6915807-6915874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6908803-6908862:-1:exon

Znf516
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 516
translation: MDRSRETEMELRRGPSPPRASRSHEVDGDKAACHSCCICGKSFPFQSSLSQHMRKHTGEKPYKCPYCDHRASQKGNLKIHIRSHRTGTLIQGHEPEAGEAQLGEMRVSEGLDGCASPTKSTSACNRVLNGAVPMDGSKILLRSSRKEVEGAASAQEDTEATVPCSFCKSRFERKKDLELHVHQAHKPFKCRLCSYVTLREESLLSHIERDHITAQVPNGSEACVENGKPELSPGEFPCEVCGQAFSQTWFLKAHMKKHRGSFDHGCHICGRRFKEPWFLKNHMKAHGPKAGSKNRPKSELDPIATINNVVQEEVIVAGLSLYEVCTKCGNLFTNLDSLNAHNAIHRKVEASRIRAPAEEGDTEDPLNTKQFFLQCLNLTPYVAGDVSPSGQAGQRVAELDPVNSYQAWQLATRGKVAEPAEYLKYGTWDEALAGDVAFDKDKREYILVSQEKRKREQDAPSTQAPPRKRASVPGDPMLSGPIEPRPASRPNRRAAATTGQGKSSECFECGKIFRTYHQMVLHSRVHRRARRDRDPEGDRAVRARCSSLSEGDSASQPSSPGSACATADSPGLAEEGVDDSGEEAVPEAASGGQPHLCCSSGEEAPTVLSNGDQSHKLGNDMPERDISEPKVGIATPSVSILENSSRETAKGPEQHKYSLDLKMPAFHSKQEVPSTTDRVDFPSSMEITSLQHPLDSQAGHSKDKLSDLHKEYCGVGKRASAPDLVPLDLSMKSSRREPSSKEACSLQEALVIHPCPYCNHKTYYPEVLWMHKRIWHRVSCSSVAPPWTQPSGHKSIRSNLVFLPRSGRTGPPPALGGKECQPLLVSRFTRTQVPGGVPGSKGSSSPLGVTTKAASMPKNKESHSGSPCALWASGPEGYRQTRAGHGQDPPSAAVQGPLAKPKPEASSRLAPSPGSGGLSRSATPTPSVITRVGAQPSANSKPVEKLGVPAVGTGFPPPNKHSAPDSLKAKFSPQPQGQPPSKGEGGSPLPPREPPVKVAQELRTLATCAAGSRGDAALQAPPGAPPTLHSTKQELAAEGQEKRLDILSVFKTYIPKDFTTLYQGWGVSNPGPEHRGTPRTQARQGDFVCVECGKSFQQPSQLRAHLRAHTVVFECDGPRDSEVHTASTDAPKQGRDHTTPGTVPAGPLRKGT
SIO_010081: Znf516
subclass of: SO_0000673
so part of: Znf516
location: complement(join(6908803..6908862,6915807..6915874,6917091..6917195,6921692..6923146,6951092..6952862))
location: region:6908803-6952862:-1
so has part: feature:6951092-6952862:-1:exon
so has part: feature:6921692-6923146:-1:exon
so has part: feature:6917091-6917195:-1:exon
so has part: feature:6915807-6915874:-1:exon
so has part: feature:6908803-6908862:-1:exon

XP_034373745.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6951092-6952862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6921692-6923146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6917091-6917195:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6915807-6915874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6908803-6908862:-1:exon

Znf236
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Znf236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7204719..7297385
location: region:7204719-7297385:1
so has part: feature:7204719-7297385:1:exon
subclass of: SO_0000010

117719682
type: Gene
SIO_000068: ncbigene

position:7204719:1
position: 7204719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7297385:1
position: 7297385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7204719-7297385:1:exon

Znf236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Znf236
product: zinc finger protein 236
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034517859.1
SIO_010081: Znf236
subclass of: SO_0000673
so part of: Znf236
location: join(7204719..7205929,7215673..7215815,7217001..7217165,7223173..7223351,7226260..7226384,7229222..7229394,7230590..7230733,7234375..7234578,7235393..7235621,7246441..7246713,7247889..7248092,7252153..7252294,7252866..7253126,7256277..7256533,7259647..7259748,7260216..7260367,7262204..7262307,7262760..7262911,7264603..7264815,7266456..7266738,7267740..7267843,7269347..7269712,7270338..7270483,7270576..7270816,7271280..7271459,7281749..7281936,7283487..7283618,7287790..7287987,7291196..7291325,7293555..7293731,7295074..7297385)
location: region:7204719-7297385:1
so has part: feature:7204719-7205929:1:exon
so has part: feature:7215673-7215815:1:exon
so has part: feature:7217001-7217165:1:exon
so has part: feature:7223173-7223351:1:exon
so has part: feature:7226260-7226384:1:exon
so has part: feature:7229222-7229394:1:exon
so has part: feature:7230590-7230733:1:exon
so has part: feature:7234375-7234578:1:exon
so has part: feature:7235393-7235621:1:exon
so has part: feature:7246441-7246713:1:exon
so has part: feature:7247889-7248092:1:exon
so has part: feature:7252153-7252294:1:exon
so has part: feature:7252866-7253126:1:exon
so has part: feature:7256277-7256533:1:exon
so has part: feature:7259647-7259748:1:exon
so has part: feature:7260216-7260367:1:exon
so has part: feature:7262204-7262307:1:exon
so has part: feature:7262760-7262911:1:exon
so has part: feature:7264603-7264815:1:exon
so has part: feature:7266456-7266738:1:exon
so has part: feature:7267740-7267843:1:exon
so has part: feature:7269347-7269712:1:exon
so has part: feature:7270338-7270483:1:exon
so has part: feature:7270576-7270816:1:exon
so has part: feature:7271280-7271459:1:exon
so has part: feature:7281749-7281936:1:exon
so has part: feature:7283487-7283618:1:exon
so has part: feature:7287790-7287987:1:exon
so has part: feature:7291196-7291325:1:exon
so has part: feature:7293555-7293731:1:exon
so has part: feature:7295074-7297385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7204719-7205929:1:exon

position:7205929:1
position: 7205929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7215673-7215815:1:exon

position:7215673:1
position: 7215673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7215815:1
position: 7215815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7217001-7217165:1:exon

position:7217001:1
position: 7217001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7217165:1
position: 7217165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7223173-7223351:1:exon

position:7223173:1
position: 7223173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7223351:1
position: 7223351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7226260-7226384:1:exon

position:7226260:1
position: 7226260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7226384:1
position: 7226384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7229222-7229394:1:exon

position:7229222:1
position: 7229222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7229394:1
position: 7229394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7230590-7230733:1:exon

position:7230590:1
position: 7230590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7230733:1
position: 7230733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7234375-7234578:1:exon

position:7234375:1
position: 7234375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7234578:1
position: 7234578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7235393-7235621:1:exon

position:7235393:1
position: 7235393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7235621:1
position: 7235621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7246441-7246713:1:exon

position:7246441:1
position: 7246441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7246713:1
position: 7246713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7247889-7248092:1:exon

position:7247889:1
position: 7247889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7248092:1
position: 7248092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7252153-7252294:1:exon

position:7252153:1
position: 7252153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7252294:1
position: 7252294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7252866-7253126:1:exon

position:7252866:1
position: 7252866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7253126:1
position: 7253126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7256277-7256533:1:exon

position:7256277:1
position: 7256277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7256533:1
position: 7256533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7259647-7259748:1:exon

position:7259647:1
position: 7259647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7259748:1
position: 7259748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7260216-7260367:1:exon

position:7260216:1
position: 7260216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7260367:1
position: 7260367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7262204-7262307:1:exon

position:7262204:1
position: 7262204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7262307:1
position: 7262307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7262760-7262911:1:exon

position:7262760:1
position: 7262760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7262911:1
position: 7262911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7264603-7264815:1:exon

position:7264603:1
position: 7264603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7264815:1
position: 7264815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7266456-7266738:1:exon

position:7266456:1
position: 7266456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7266738:1
position: 7266738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7267740-7267843:1:exon

position:7267740:1
position: 7267740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7267843:1
position: 7267843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7269347-7269712:1:exon

position:7269347:1
position: 7269347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7269712:1
position: 7269712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7270338-7270483:1:exon

position:7270338:1
position: 7270338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7270483:1
position: 7270483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7270576-7270816:1:exon

position:7270576:1
position: 7270576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7270816:1
position: 7270816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:7271280-7271459:1:exon

position:7271280:1
position: 7271280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7271459:1
position: 7271459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:7281749-7281936:1:exon

position:7281749:1
position: 7281749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7281936:1
position: 7281936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:7283487-7283618:1:exon

position:7283487:1
position: 7283487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7283618:1
position: 7283618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:7287790-7287987:1:exon

position:7287790:1
position: 7287790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7287987:1
position: 7287987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:7291196-7291325:1:exon

position:7291196:1
position: 7291196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7291325:1
position: 7291325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:7293555-7293731:1:exon

position:7293555:1
position: 7293555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7293731:1
position: 7293731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:7295074-7297385:1:exon

position:7295074:1
position: 7295074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Znf236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Znf236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 236
translation: MRITAPPPPLPAPNAPAAARGPWNPPRPARSERCCPRVRAPSPCEPGGLGPAAAAAARPPAGAARARPPSESASEGWAAATMPRGRPPKPRDGAARGDSDGILALNDDDIDDDCPIPNFHKCEICLLSFPKESQFQRHMREHEQNDKPHRCDQCPQTFNVEFNLTLHKCTHNAEDPVCPVCNKKFSRVASLKAHIMLHEKEENLICSECGDEFTLHSQLAIHMEEHRQELANNRVHTCKACKKEFETSPELKEHMKTHCKVRASGTRSYNRNIDRSSFTYSCPHCGKTFQKPSQLTRHIRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSEVKNGPTYNCTECSCIFKSLGSLNTHISKMHMGGPPNSTSSTETAHVITATIFQTLPLQQVEAQVSSVSSEQNSQAVTDVIQQLLELSEPGPVEAQQSPQSGRQLSVTVGINQDILQQALENSGLSSLPVAAPPSDCSHAQTSTVSTQSPHTSSVSAEQADPMDAEQEKGQESPEKMDKKEKKILKKKSPFLPGSIREENGVRWHVCPYCTKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHVASHFKHTELRKLRQQRKPSKGRVGKSGVPVPDIPLQEPILITDLGLIQPIPKNQFFQNYFNNNFGNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVLKAHVRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELAQQLQQHQEASSMDDDSTVDQQSIQVSAPMPVEIESAELQQTPETVATDPESLLELEPQHVAGTDGTALGQQLADQPLGADEDGFTASQAPLPGHMDQFEEQGTPQSSFESAGLPQGFTVTDTYSQQTSFPPVQQLQDSSTLESQALSTSFHQQNLLQVPSSDAINVATRLLPESSQEDLDLQTQRPQFLEDSEDQSRRSYRCDYCNKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSICNASFTTNGSLTRHMATHMSMKPYKCPFCEEGFRTAIHCRKHMKRHQAVSSAASAAAETEGGDTCVEEDEENSDRSASRKPRPEVITFTEEETAQLAKIQPQESATVSEKVLVQSAAEKDRISEMKDKQAELEAEPKHANCCTYCPKSFKKPSDLVRHVRIHTGEKPYKCDECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCELRFRTSGRRKTHMQFHYKSDPKKARKPVTRSSSESLQSVNLLNSSSADPSVFIMNNSVLAGQFDQNMLQQGLVGQAILPASVSAGGDLTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDASSINNITLQIDPSILQQTLQQGNLLTQPITGESGTASQNSALQTSDSTVPASVVIQPISGLSLQPTVTSANLTIGPLSEQDSVLTTSSSGTQDLTQVMTSQGLVSTSTGPHEITLTINNSSLSQVLAQAAGPTSSSSSGSPQEITLTISELNPSSGSLPSTAPMSPSAISAQNLVMSSSGVGTDASVTLTLADTQGMLSGGLDTVTLNITSQGQQFPALLTDPSLSGQGGAGSPQVILVSHTPQSSSAAGEEIAYQVTDVSAQLNPNSQPEKEGPLHQCLDCDRAFSSAAVLMHHSKEVHGKERIHGCRVCRKAFKRATHLKEHMLTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKHTGERPYRCDYCVMGFTQKSNMKLHMKRAHSFVGTLQAAAVVQEQDGDELRTLHLEEVVQEAAGEWQSLTNVF
SIO_010081: Znf236
subclass of: SO_0000673
so part of: Znf236
location: join(7205632..7205929,7215673..7215815,7217001..7217165,7223173..7223351,7226260..7226384,7229222..7229394,7230590..7230733,7234375..7234578,7235393..7235621,7246441..7246713,7247889..7248092,7252153..7252294,7252866..7253126,7256277..7256533,7259647..7259748,7260216..7260367,7262204..7262307,7262760..7262911,7264603..7264815,7266456..7266738,7267740..7267843,7269347..7269712,7270338..7270483,7270576..7270816,7271280..7271459,7281749..7281936,7283487..7283618,7287790..7287987,7291196..7291325,7293555..7293731,7295074..7295195)
location: region:7205632-7295195:1
so has part: feature:7205632-7205929:1:exon
so has part: feature:7215673-7215815:1:exon
so has part: feature:7217001-7217165:1:exon
so has part: feature:7223173-7223351:1:exon
so has part: feature:7226260-7226384:1:exon
so has part: feature:7229222-7229394:1:exon
so has part: feature:7230590-7230733:1:exon
so has part: feature:7234375-7234578:1:exon
so has part: feature:7235393-7235621:1:exon
so has part: feature:7246441-7246713:1:exon
so has part: feature:7247889-7248092:1:exon
so has part: feature:7252153-7252294:1:exon
so has part: feature:7252866-7253126:1:exon
so has part: feature:7256277-7256533:1:exon
so has part: feature:7259647-7259748:1:exon
so has part: feature:7260216-7260367:1:exon
so has part: feature:7262204-7262307:1:exon
so has part: feature:7262760-7262911:1:exon
so has part: feature:7264603-7264815:1:exon
so has part: feature:7266456-7266738:1:exon
so has part: feature:7267740-7267843:1:exon
so has part: feature:7269347-7269712:1:exon
so has part: feature:7270338-7270483:1:exon
so has part: feature:7270576-7270816:1:exon
so has part: feature:7271280-7271459:1:exon
so has part: feature:7281749-7281936:1:exon
so has part: feature:7283487-7283618:1:exon
so has part: feature:7287790-7287987:1:exon
so has part: feature:7291196-7291325:1:exon
so has part: feature:7293555-7293731:1:exon
so has part: feature:7295074-7295195:1:exon

XP_034373750.1
type: Protein
SIO_000068: ncbiprotein

position:7205632:1
position: 7205632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7295195:1
position: 7295195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7205632-7205929:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7215673-7215815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7217001-7217165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7223173-7223351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7226260-7226384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7229222-7229394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7230590-7230733:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7234375-7234578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7235393-7235621:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7246441-7246713:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7247889-7248092:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7252153-7252294:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7252866-7253126:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7256277-7256533:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7259647-7259748:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7260216-7260367:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7262204-7262307:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7262760-7262911:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7264603-7264815:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7266456-7266738:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7267740-7267843:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7269347-7269712:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7270338-7270483:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:7270576-7270816:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:7271280-7271459:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:7281749-7281936:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:7283487-7283618:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:7287790-7287987:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:7291196-7291325:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:7293555-7293731:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:7295074-7295195:1:exon

Mbp
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7306396..7420216)
location: region:7306396-7420216:-1
so has part: feature:7306396-7420216:-1:exon
subclass of: SO_0000010

117719582
type: Gene
SIO_000068: ncbigene

position:7306396:-1
position: 7306396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7420216:-1
position: 7420216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7306396-7420216:-1:exon

Mbp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mbp
product: myelin basic protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 mRNAs, 10 long SRA reads, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034517759.1
SIO_010081: Mbp
subclass of: SO_0000673
so part of: Mbp
location: complement(join(7306396..7307956,7316612..7316644,7317038..7317073,7319139..7319237,7337608..7338044,7374321..7374408,7394520..7394595,7419969..7420216))
location: region:7306396-7420216:-1
so has part: feature:7419969-7420216:-1:exon
so has part: feature:7394520-7394595:-1:exon
so has part: feature:7374321-7374408:-1:exon
so has part: feature:7337608-7338044:-1:exon
so has part: feature:7319139-7319237:-1:exon
so has part: feature:7317038-7317073:-1:exon
so has part: feature:7316612-7316644:-1:exon
so has part: feature:7306396-7307956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7419969-7420216:-1:exon

position:7419969:-1
position: 7419969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7394520-7394595:-1:exon

position:7394520:-1
position: 7394520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7394595:-1
position: 7394595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7374321-7374408:-1:exon

position:7374321:-1
position: 7374321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7374408:-1
position: 7374408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7337608-7338044:-1:exon

position:7337608:-1
position: 7337608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7338044:-1
position: 7338044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7319139-7319237:-1:exon

position:7319139:-1
position: 7319139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7319237:-1
position: 7319237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7317038-7317073:-1:exon

position:7317038:-1
position: 7317038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7317073:-1
position: 7317073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7316612-7316644:-1:exon

position:7316612:-1
position: 7316612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7316644:-1
position: 7316644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7306396-7307956:-1:exon

position:7307956:-1
position: 7307956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Mbp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mbp
product: myelin basic protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 69 mRNAs, 9 long SRA reads, 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034517758.1
SIO_010081: Mbp
subclass of: SO_0000673
so part of: Mbp
location: complement(join(7306396..7307956,7313021..7313143,7316612..7316644,7317038..7317073,7319139..7319237,7337608..7338044,7374321..7374408,7394520..7394595,7419969..7420216))
location: region:7306396-7420216:-1
so has part: feature:7419969-7420216:-1:exon
so has part: feature:7394520-7394595:-1:exon
so has part: feature:7374321-7374408:-1:exon
so has part: feature:7337608-7338044:-1:exon
so has part: feature:7319139-7319237:-1:exon
so has part: feature:7317038-7317073:-1:exon
so has part: feature:7316612-7316644:-1:exon
so has part: feature:7313021-7313143:-1:exon
so has part: feature:7306396-7307956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7419969-7420216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7394520-7394595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7374321-7374408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7337608-7338044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7319139-7319237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7317038-7317073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7316612-7316644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7313021-7313143:-1:exon

position:7313021:-1
position: 7313021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7313143:-1
position: 7313143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7306396-7307956:-1:exon

Mbp
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mbp
product: myelin basic protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 mRNAs, 7 long SRA reads, 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034517760.1
SIO_010081: Mbp
subclass of: SO_0000673
so part of: Mbp
location: complement(join(7306396..7307956,7313021..7313143,7316612..7316644,7317038..7317073,7319139..7319237,7330409..7330486,7337608..7338044,7374321..7374408,7394520..7394595,7419969..7420216))
location: region:7306396-7420216:-1
so has part: feature:7419969-7420216:-1:exon
so has part: feature:7394520-7394595:-1:exon
so has part: feature:7374321-7374408:-1:exon
so has part: feature:7337608-7338044:-1:exon
so has part: feature:7330409-7330486:-1:exon
so has part: feature:7319139-7319237:-1:exon
so has part: feature:7317038-7317073:-1:exon
so has part: feature:7316612-7316644:-1:exon
so has part: feature:7313021-7313143:-1:exon
so has part: feature:7306396-7307956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7419969-7420216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7394520-7394595:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7374321-7374408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7337608-7338044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7330409-7330486:-1:exon

position:7330409:-1
position: 7330409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7330486:-1
position: 7330486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7319139-7319237:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7317038-7317073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7316612-7316644:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7313021-7313143:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7306396-7307956:-1:exon

Mbp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X2
translation: MGNHSGKRELAAEKASKDGEIHRGEAEKKRSVAKLSQTASEDSDVFGEADAIQNNGTSAEDTAVTDSKHTADPKNNWQGAHPADPGNRPHLIRLFSRDAPGREDNTFKDRPSESDELQTIQEDPTAASEGLDVMASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFSGDRGAPKRGSGKDSHTRTTHYGSLPQKQHGQTQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGGRDSRSGSPMARR
SIO_010081: Mbp
subclass of: SO_0000673
so part of: Mbp
location: complement(join(7307912..7307956,7316612..7316644,7317038..7317073,7319139..7319237,7337608..7338044,7374321..7374408,7394520..7394570))
location: region:7307912-7394570:-1
so has part: feature:7394520-7394570:-1:exon
so has part: feature:7374321-7374408:-1:exon
so has part: feature:7337608-7338044:-1:exon
so has part: feature:7319139-7319237:-1:exon
so has part: feature:7317038-7317073:-1:exon
so has part: feature:7316612-7316644:-1:exon
so has part: feature:7307912-7307956:-1:exon

XP_034373650.1
type: Protein
SIO_000068: ncbiprotein

position:7307912:-1
position: 7307912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7394570:-1
position: 7394570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7394520-7394570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7374321-7374408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7337608-7338044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7319139-7319237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7317038-7317073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7316612-7316644:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7307912-7307956:-1:exon

Mbp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X1
translation: MGNHSGKRELAAEKASKDGEIHRGEAEKKRSVAKLSQTASEDSDVFGEADAIQNNGTSAEDTAVTDSKHTADPKNNWQGAHPADPGNRPHLIRLFSRDAPGREDNTFKDRPSESDELQTIQEDPTAASEGLDVMASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFSGDRGAPKRGSGKDSHTRTTHYGSLPQKQHGQTQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGFKGAYDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: Mbp
subclass of: SO_0000673
so part of: Mbp
location: complement(join(7307912..7307956,7313021..7313143,7316612..7316644,7317038..7317073,7319139..7319237,7337608..7338044,7374321..7374408,7394520..7394570))
location: region:7307912-7394570:-1
so has part: feature:7394520-7394570:-1:exon
so has part: feature:7374321-7374408:-1:exon
so has part: feature:7337608-7338044:-1:exon
so has part: feature:7319139-7319237:-1:exon
so has part: feature:7317038-7317073:-1:exon
so has part: feature:7316612-7316644:-1:exon
so has part: feature:7313021-7313143:-1:exon
so has part: feature:7307912-7307956:-1:exon

XP_034373649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7394520-7394570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7374321-7374408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7337608-7338044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7319139-7319237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7317038-7317073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7316612-7316644:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7313021-7313143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7307912-7307956:-1:exon

Mbp
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mbp
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myelin basic protein isoform X3
translation: MGNHSGKRELAAEKASKDGEIHRGEAEKKRSVAKLSQTASEDSDVFGEADAIQNNGTSAEDTAVTDSKHTADPKNNWQGAHPADPGNRPHLIRLFSRDAPGREDNTFKDRPSESDELQTIQEDPTAASEGLDVMASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFSGDRGAPKRGSGKVPWLKQSRSPLPPHARSRPGLCHLYKDSHTRTTHYGSLPQKQHGQTQDENPVVHFFKNIVTPRTPPPSQGKGRGLSLSRFSWGAEGQKPGFGYGGRASDYKSAHKGFKGAYDAQGTLSKIFKLGGRDSRSGSPMARR
SIO_010081: Mbp
subclass of: SO_0000673
so part of: Mbp
location: complement(join(7307912..7307956,7313021..7313143,7316612..7316644,7317038..7317073,7319139..7319237,7330409..7330486,7337608..7338044,7374321..7374408,7394520..7394570))
location: region:7307912-7394570:-1
so has part: feature:7394520-7394570:-1:exon
so has part: feature:7374321-7374408:-1:exon
so has part: feature:7337608-7338044:-1:exon
so has part: feature:7330409-7330486:-1:exon
so has part: feature:7319139-7319237:-1:exon
so has part: feature:7317038-7317073:-1:exon
so has part: feature:7316612-7316644:-1:exon
so has part: feature:7313021-7313143:-1:exon
so has part: feature:7307912-7307956:-1:exon

XP_034373651.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7394520-7394570:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7374321-7374408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7337608-7338044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7330409-7330486:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7319139-7319237:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7317038-7317073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7316612-7316644:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7313021-7313143:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7307912-7307956:-1:exon

Trnav-uac
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Trnav-uac
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 7366760..7366832
location: region:7366760-7366832:1
so has part: feature:7366760-7366832:1:exon
subclass of: SO_0000663

117720311
type: Gene
SIO_000068: ncbigene

position:7366760:1
position: 7366760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7366832:1
position: 7366832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7366760-7366832:1:exon

Trnav-uac
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 61156
gene: Trnav-uac
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon UAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:7366793..7366795,aa:Val,seq:tac)
SIO_010081: Trnav-uac
subclass of: SO_0000673
so part of: Trnav-uac
location: 7366760..7366832
location: region:7366760-7366832:1
so has part: feature:7366760-7366832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7366760-7366832:1:exon

Galr1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Galr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7490821..7505659
location: region:7490821-7505659:1
so has part: feature:7490821-7505659:1:exon
subclass of: SO_0000010

117720123
type: Gene
SIO_000068: ncbigene

position:7490821:1
position: 7490821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7505659:1
position: 7505659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7490821-7505659:1:exon

Galr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Galr1
product: galanin receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 5 Proteins
transcript id: XM_034518585.1
SIO_010081: Galr1
subclass of: SO_0000673
so part of: Galr1
location: join(7490821..7491795,7496229..7496294,7504847..7505659)
location: region:7490821-7505659:1
so has part: feature:7490821-7491795:1:exon
so has part: feature:7496229-7496294:1:exon
so has part: feature:7504847-7505659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7490821-7491795:1:exon

position:7491795:1
position: 7491795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7496229-7496294:1:exon

position:7496229:1
position: 7496229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7496294:1
position: 7496294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7504847-7505659:1:exon

position:7504847:1
position: 7504847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Galr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Galr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: galanin receptor type 1
translation: MELATMNLTEGNGSDPEPLAPESRPLFGIGVENFITLVVFGLIFAMGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGFIWALSIAMASPVAYHQRLFHRDSNQTFCWEQWPNQLHKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNMSKKSEASKKKTAQTVLVVVVVFGISWLPHHVVHLWAEFGAFPLTPASFFFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHVCNESPRSEAKENKSRIDTPPSTNCTHV
SIO_010081: Galr1
subclass of: SO_0000673
so part of: Galr1
location: join(7491133..7491795,7496229..7496294,7504847..7505164)
location: region:7491133-7505164:1
so has part: feature:7491133-7491795:1:exon
so has part: feature:7496229-7496294:1:exon
so has part: feature:7504847-7505164:1:exon

XP_034374476.1
type: Protein
SIO_000068: ncbiprotein

position:7491133:1
position: 7491133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7505164:1
position: 7505164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7491133-7491795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7496229-7496294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7504847-7505164:1:exon

LOC117719983
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719983
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7596342..7596895
location: region:7596342-7596895:1
so has part: feature:7596342-7596895:1:exon

117719983
type: Gene
SIO_000068: ncbigene

position:7596342:1
position: 7596342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7596895:1
position: 7596895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7596342-7596895:1:exon

LOC117719983
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117719983
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117719983
subclass of: SO_0000673
so part of: LOC117719983
location: 7596342..7596895
location: region:7596342-7596895:1
so has part: feature:7596342-7596895:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7596342-7596895:1:exon

LOC117720243
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720243
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(7828909..7829033)
location: region:7828909-7829033:-1
so has part: feature:7828909-7829033:-1:exon

117720243
type: Gene
SIO_000068: ncbigene

position:7828909:-1
position: 7828909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7829033:-1
position: 7829033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7828909-7829033:-1:exon

LOC117720243
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720243
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117720243
subclass of: SO_0000673
so part of: LOC117720243
location: complement(7828909..7829033)
location: region:7828909-7829033:-1
so has part: feature:7828909-7829033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7828909-7829033:-1:exon

LOC117719950
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719950
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8809581..8809980)
location: region:8809581-8809980:-1
so has part: feature:8809581-8809980:-1:exon

117719950
type: Gene
SIO_000068: ncbigene

position:8809581:-1
position: 8809581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8809980:-1
position: 8809980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8809581-8809980:-1:exon

LOC117719950
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117719950
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117719950
subclass of: SO_0000673
so part of: LOC117719950
location: complement(8809581..8809980)
location: region:8809581-8809980:-1
so has part: feature:8809581-8809980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8809581-8809980:-1:exon

Sall3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Sall3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8820301..8838360
location: region:8820301-8838360:1
so has part: feature:8820301-8838360:1:exon
subclass of: SO_0000010

117719949
type: Gene
SIO_000068: ncbigene

position:8820301:1
position: 8820301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8838360:1
position: 8838360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8820301-8838360:1:exon

Sall3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sall3
product: spalt like transcription factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034518404.1
SIO_010081: Sall3
subclass of: SO_0000673
so part of: Sall3
location: join(8820301..8820867,8832526..8835974,8837330..8838360)
location: region:8820301-8838360:1
so has part: feature:8820301-8820867:1:exon
so has part: feature:8832526-8835974:1:exon
so has part: feature:8837330-8838360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8820301-8820867:1:exon

position:8820867:1
position: 8820867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8832526-8835974:1:exon

position:8832526:1
position: 8832526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8835974:1
position: 8835974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8837330-8838360:1:exon

position:8837330:1
position: 8837330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sall3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sall3
product: spalt like transcription factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034518405.1
SIO_010081: Sall3
subclass of: SO_0000673
so part of: Sall3
location: join(8820301..8820867,8832526..8835417,8835634..8835974,8837330..8838360)
location: region:8820301-8838360:1
so has part: feature:8820301-8820867:1:exon
so has part: feature:8832526-8835417:1:exon
so has part: feature:8835634-8835974:1:exon
so has part: feature:8837330-8838360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8820301-8820867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8832526-8835417:1:exon

position:8835417:1
position: 8835417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8835634-8835974:1:exon

position:8835634:1
position: 8835634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8837330-8838360:1:exon

Sall3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sall3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 3 isoform X1
translation: MSRRKQAKPQHLKSDEELPPQDGASEHGVPGDGAEDADSGSESRSGSEETSVCEKCCAEFFKWTDFLQHKKTCTKNPLVLIVHDDEPAPPSEDFPEPSPASSPSDRTESEVAEEVAPTEGSEVKAAAKEAEPMDVEASADKGPPGPSVPPPPPALPPQPEPAAFSMPSTNVTLETLLSTKVAVAQFSQGARAGGTTGAGGSVGAVAIPMILEQLVALQQQQIHQLQLIEQIRSQVALMSRQPGPPLKSAASAPGTASVQLQGLTPHAALQLSAGPATASAGSGSTLPSAFDGPQHLSQPASGTSTPCSTSTGPTDSGAHPACSTGPAPGAVAAASSTVGNTVQPQNASTPPTLGPGPLLSSASNLPNPLLPQTSSSSVIFPNPLVSIAATANALDPLSALMKHRKGKPPNVSVFEPKASAEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEYLDNVPTCSGIPYGMSLPPEKPVTTWLDSKPVLPTVPTSVGLQLPPTVPGTHNYTDSPSITPSSRSPQRPSPASSECTSLSPGLNNTESGITVRPESPQPLLSGPSLTKAEPVSLPCTSTRTGDAPVVGGQVSGLPSSAATTVTDSACTSLGSPGLPAVSDQFKAQFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHFGVHRAKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPEGLQEAMDAELPFDEKNAETLSSFDDDVDENSMEEDSELKDAASDSSKPLLSYSGSCPPSPPSVISSIAALENQMKMIDSVMNCQQLASLKPVENGSGESDRLSNDSSSAVGDLESRSAGSPALSESSSSQALSPAHSNGESFRSKSPGLGHQEDPQEIPLKTERLDSPPPGPGNGGALDLTAGHPGRPLIKEEAPFSLLFLSRERGKCASTVCGVCGKPFACKSALEIHYRSHTKERPFVCTVCRRGCSTMGNLKQHLLTHKLKELPSQVFDPNFTLGPSHSTPSLASSPAPTMIKMEVNGHSKAIALGEGPALPAGVQVPTGPQTVMSPGLAPMLAPPPRRTPKQHNCQSCGKTFSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPMALLGGDALKFSEMFQKDLAARAMNVDPSFWNQYAAAITNGLAMKNNEISVIQNGGIPQLPVSLGGGAIPPLGAMASGVDKTRTGSSPPIVSLDKASSETGASRPFTRFIEDNKEIGIN
SIO_010081: Sall3
subclass of: SO_0000673
so part of: Sall3
location: join(8820786..8820867,8832526..8835974,8837330..8837761)
location: region:8820786-8837761:1
so has part: feature:8820786-8820867:1:exon
so has part: feature:8832526-8835974:1:exon
so has part: feature:8837330-8837761:1:exon

XP_034374295.1
type: Protein
SIO_000068: ncbiprotein

position:8820786:1
position: 8820786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8837761:1
position: 8837761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8820786-8820867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8832526-8835974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8837330-8837761:1:exon

Sall3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sall3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sal-like protein 3 isoform X2
translation: MSRRKQAKPQHLKSDEELPPQDGASEHGVPGDGAEDADSGSESRSGSEETSVCEKCCAEFFKWTDFLQHKKTCTKNPLVLIVHDDEPAPPSEDFPEPSPASSPSDRTESEVAEEVAPTEGSEVKAAAKEAEPMDVEASADKGPPGPSVPPPPPALPPQPEPAAFSMPSTNVTLETLLSTKVAVAQFSQGARAGGTTGAGGSVGAVAIPMILEQLVALQQQQIHQLQLIEQIRSQVALMSRQPGPPLKSAASAPGTASVQLQGLTPHAALQLSAGPATASAGSGSTLPSAFDGPQHLSQPASGTSTPCSTSTGPTDSGAHPACSTGPAPGAVAAASSTVGNTVQPQNASTPPTLGPGPLLSSASNLPNPLLPQTSSSSVIFPNPLVSIAATANALDPLSALMKHRKGKPPNVSVFEPKASAEDPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEYLDNVPTCSGIPYGMSLPPEKPVTTWLDSKPVLPTVPTSVGLQLPPTVPGTHNYTDSPSITPSSRSPQRPSPASSECTSLSPGLNNTESGITVRPESPQPLLSGPSLTKAEPVSLPCTSTRTGDAPVVGGQVSGLPSSAATTVTDSACTSLGSPGLPAVSDQFKAQFPFGGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRTHTGERPFKCKICGRAFTTKGNLKTHFGVHRAKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTPLPEGLQEAMDAELPFDEKNAETLSSFDDDVDENSMEEDSELKDAASDSSKPLLSYSGSCPPSPPSVISSIAALENQMKMIDSVMNCQQLASLKPVENGSGESDRLSNDSSSAVGDLESRSAGSPALSESSSSQALSPAHSNGESFRSKSPGLGHQEDPQEIPLKTERLDSPPPGPGNGGALDLTAGHPGRPLIKEEAPFSLLFLSRERGPSHSTPSLASSPAPTMIKMEVNGHSKAIALGEGPALPAGVQVPTGPQTVMSPGLAPMLAPPPRRTPKQHNCQSCGKTFSSASALQIHERTHTGEKPFGCTICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPMALLGGDALKFSEMFQKDLAARAMNVDPSFWNQYAAAITNGLAMKNNEISVIQNGGIPQLPVSLGGGAIPPLGAMASGVDKTRTGSSPPIVSLDKASSETGASRPFTRFIEDNKEIGIN
SIO_010081: Sall3
subclass of: SO_0000673
so part of: Sall3
location: join(8820786..8820867,8832526..8835417,8835634..8835974,8837330..8837761)
location: region:8820786-8837761:1
so has part: feature:8820786-8820867:1:exon
so has part: feature:8832526-8835417:1:exon
so has part: feature:8835634-8835974:1:exon
so has part: feature:8837330-8837761:1:exon

XP_034374296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8820786-8820867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8832526-8835417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8835634-8835974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8837330-8837761:1:exon

Atp9b
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Atp9b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8874606..9066721
location: region:8874606-9066721:1
so has part: feature:8874606-9066721:1:exon
subclass of: SO_0000010

117719743
type: Gene
SIO_000068: ncbigene

position:8874606:1
position: 8874606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9066721:1
position: 9066721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8874606-9066721:1:exon

Atp9b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Atp9b
product: ATPase phospholipid transporting 9B (putative), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 long SRA reads, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034517990.1
SIO_010081: Atp9b
subclass of: SO_0000673
so part of: Atp9b
location: join(8874606..8874838,8890478..8890651,8895643..8895793,8898395..8898508,8911648..8911756,8919756..8919814,8927970..8928021,8939257..8939351,8951369..8951449,8953524..8953599,8961633..8961709,8987042..8987202,9003590..9003732,9020698..9020810,9022635..9022883,9034228..9034389,9035029..9035121,9037089..9037172,9037830..9038000,9041736..9041834,9043562..9043651,9045812..9045956,9046176..9046240,9047033..9047188,9047366..9047430,9049926..9050034,9062171..9062228,9063144..9063347,9064815..9064847,9065555..9066721)
location: region:8874606-9066721:1
so has part: feature:8874606-8874838:1:exon
so has part: feature:8890478-8890651:1:exon
so has part: feature:8895643-8895793:1:exon
so has part: feature:8898395-8898508:1:exon
so has part: feature:8911648-8911756:1:exon
so has part: feature:8919756-8919814:1:exon
so has part: feature:8927970-8928021:1:exon
so has part: feature:8939257-8939351:1:exon
so has part: feature:8951369-8951449:1:exon
so has part: feature:8953524-8953599:1:exon
so has part: feature:8961633-8961709:1:exon
so has part: feature:8987042-8987202:1:exon
so has part: feature:9003590-9003732:1:exon
so has part: feature:9020698-9020810:1:exon
so has part: feature:9022635-9022883:1:exon
so has part: feature:9034228-9034389:1:exon
so has part: feature:9035029-9035121:1:exon
so has part: feature:9037089-9037172:1:exon
so has part: feature:9037830-9038000:1:exon
so has part: feature:9041736-9041834:1:exon
so has part: feature:9043562-9043651:1:exon
so has part: feature:9045812-9045956:1:exon
so has part: feature:9046176-9046240:1:exon
so has part: feature:9047033-9047188:1:exon
so has part: feature:9047366-9047430:1:exon
so has part: feature:9049926-9050034:1:exon
so has part: feature:9062171-9062228:1:exon
so has part: feature:9063144-9063347:1:exon
so has part: feature:9064815-9064847:1:exon
so has part: feature:9065555-9066721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8874606-8874838:1:exon

position:8874838:1
position: 8874838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8890478-8890651:1:exon

position:8890478:1
position: 8890478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8890651:1
position: 8890651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8895643-8895793:1:exon

position:8895643:1
position: 8895643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8895793:1
position: 8895793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8898395-8898508:1:exon

position:8898395:1
position: 8898395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8898508:1
position: 8898508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8911648-8911756:1:exon

position:8911648:1
position: 8911648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8911756:1
position: 8911756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8919756-8919814:1:exon

position:8919756:1
position: 8919756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8919814:1
position: 8919814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8927970-8928021:1:exon

position:8927970:1
position: 8927970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8928021:1
position: 8928021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8939257-8939351:1:exon

position:8939257:1
position: 8939257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8939351:1
position: 8939351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8951369-8951449:1:exon

position:8951369:1
position: 8951369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8951449:1
position: 8951449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8953524-8953599:1:exon

position:8953524:1
position: 8953524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8953599:1
position: 8953599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8961633-8961709:1:exon

position:8961633:1
position: 8961633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8961709:1
position: 8961709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8987042-8987202:1:exon

position:8987042:1
position: 8987042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8987202:1
position: 8987202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9003590-9003732:1:exon

position:9003590:1
position: 9003590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9003732:1
position: 9003732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9020698-9020810:1:exon

position:9020698:1
position: 9020698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9020810:1
position: 9020810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9022635-9022883:1:exon

position:9022635:1
position: 9022635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9022883:1
position: 9022883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9034228-9034389:1:exon

position:9034228:1
position: 9034228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9034389:1
position: 9034389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9035029-9035121:1:exon

position:9035029:1
position: 9035029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9035121:1
position: 9035121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9037089-9037172:1:exon

position:9037089:1
position: 9037089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9037172:1
position: 9037172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9037830-9038000:1:exon

position:9037830:1
position: 9037830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9038000:1
position: 9038000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9041736-9041834:1:exon

position:9041736:1
position: 9041736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9041834:1
position: 9041834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9043562-9043651:1:exon

position:9043562:1
position: 9043562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9043651:1
position: 9043651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9045812-9045956:1:exon

position:9045812:1
position: 9045812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9045956:1
position: 9045956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9046176-9046240:1:exon

position:9046176:1
position: 9046176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9046240:1
position: 9046240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9047033-9047188:1:exon

position:9047033:1
position: 9047033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9047188:1
position: 9047188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:9047366-9047430:1:exon

position:9047366:1
position: 9047366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9047430:1
position: 9047430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:9049926-9050034:1:exon

position:9049926:1
position: 9049926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9050034:1
position: 9050034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:9062171-9062228:1:exon

position:9062171:1
position: 9062171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9062228:1
position: 9062228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:9063144-9063347:1:exon

position:9063144:1
position: 9063144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9063347:1
position: 9063347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:9064815-9064847:1:exon

position:9064815:1
position: 9064815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9064847:1
position: 9064847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:9065555-9066721:1:exon

position:9065555:1
position: 9065555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Atp9b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Atp9b
product: ATPase phospholipid transporting 9B (putative), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034517991.1
SIO_010081: Atp9b
subclass of: SO_0000673
so part of: Atp9b
location: join(8874626..8874838,8890478..8890651,8895643..8895793,8898395..8898508,8911648..8911756,8919756..8919814,8927970..8928021,8939257..8939351,8951369..8951449,8953524..8953599,8961633..8961709,8987042..8987202,9003590..9003732,9020698..9020810,9022635..9022883,9034228..9034389,9035029..9035121,9037089..9037172,9037830..9038000,9041736..9041834,9043562..9043651,9045812..9045956,9046176..9046240,9047033..9047188,9047366..9047430,9049926..9050034,9062171..9062228,9063144..9063347,9065555..9066721)
location: region:8874626-9066721:1
so has part: feature:8874626-8874838:1:exon
so has part: feature:8890478-8890651:1:exon
so has part: feature:8895643-8895793:1:exon
so has part: feature:8898395-8898508:1:exon
so has part: feature:8911648-8911756:1:exon
so has part: feature:8919756-8919814:1:exon
so has part: feature:8927970-8928021:1:exon
so has part: feature:8939257-8939351:1:exon
so has part: feature:8951369-8951449:1:exon
so has part: feature:8953524-8953599:1:exon
so has part: feature:8961633-8961709:1:exon
so has part: feature:8987042-8987202:1:exon
so has part: feature:9003590-9003732:1:exon
so has part: feature:9020698-9020810:1:exon
so has part: feature:9022635-9022883:1:exon
so has part: feature:9034228-9034389:1:exon
so has part: feature:9035029-9035121:1:exon
so has part: feature:9037089-9037172:1:exon
so has part: feature:9037830-9038000:1:exon
so has part: feature:9041736-9041834:1:exon
so has part: feature:9043562-9043651:1:exon
so has part: feature:9045812-9045956:1:exon
so has part: feature:9046176-9046240:1:exon
so has part: feature:9047033-9047188:1:exon
so has part: feature:9047366-9047430:1:exon
so has part: feature:9049926-9050034:1:exon
so has part: feature:9062171-9062228:1:exon
so has part: feature:9063144-9063347:1:exon
so has part: feature:9065555-9066721:1:exon

position:8874626:1
position: 8874626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8874626-8874838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8890478-8890651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8895643-8895793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8898395-8898508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8911648-8911756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8919756-8919814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8927970-8928021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8939257-8939351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8951369-8951449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8953524-8953599:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8961633-8961709:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8987042-8987202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9003590-9003732:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9020698-9020810:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9022635-9022883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9034228-9034389:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9035029-9035121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9037089-9037172:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9037830-9038000:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9041736-9041834:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9043562-9043651:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9045812-9045956:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9046176-9046240:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9047033-9047188:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9047366-9047430:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9049926-9050034:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9062171-9062228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9063144-9063347:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9065555-9066721:1:exon

Atp9b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Atp9b
product: ATPase phospholipid transporting 9B (putative), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034517992.1
SIO_010081: Atp9b
subclass of: SO_0000673
so part of: Atp9b
location: join(8874626..8874838,8890478..8890651,8895643..8895793,8898395..8898508,8911648..8911756,8919756..8919814,8927970..8928021,8939257..8939351,8953524..8953599,8961633..8961709,8987042..8987202,9003590..9003732,9020698..9020810,9022635..9022883,9034228..9034389,9035029..9035121,9037089..9037172,9037830..9038000,9041736..9041834,9043562..9043651,9045812..9045956,9046176..9046240,9047033..9047188,9047366..9047430,9049926..9050034,9062171..9062228,9063144..9063347,9064815..9064847,9065555..9066721)
location: region:8874626-9066721:1
so has part: feature:8874626-8874838:1:exon
so has part: feature:8890478-8890651:1:exon
so has part: feature:8895643-8895793:1:exon
so has part: feature:8898395-8898508:1:exon
so has part: feature:8911648-8911756:1:exon
so has part: feature:8919756-8919814:1:exon
so has part: feature:8927970-8928021:1:exon
so has part: feature:8939257-8939351:1:exon
so has part: feature:8953524-8953599:1:exon
so has part: feature:8961633-8961709:1:exon
so has part: feature:8987042-8987202:1:exon
so has part: feature:9003590-9003732:1:exon
so has part: feature:9020698-9020810:1:exon
so has part: feature:9022635-9022883:1:exon
so has part: feature:9034228-9034389:1:exon
so has part: feature:9035029-9035121:1:exon
so has part: feature:9037089-9037172:1:exon
so has part: feature:9037830-9038000:1:exon
so has part: feature:9041736-9041834:1:exon
so has part: feature:9043562-9043651:1:exon
so has part: feature:9045812-9045956:1:exon
so has part: feature:9046176-9046240:1:exon
so has part: feature:9047033-9047188:1:exon
so has part: feature:9047366-9047430:1:exon
so has part: feature:9049926-9050034:1:exon
so has part: feature:9062171-9062228:1:exon
so has part: feature:9063144-9063347:1:exon
so has part: feature:9064815-9064847:1:exon
so has part: feature:9065555-9066721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8874626-8874838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8890478-8890651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8895643-8895793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8898395-8898508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8911648-8911756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8919756-8919814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8927970-8928021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8939257-8939351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8953524-8953599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8961633-8961709:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8987042-8987202:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9003590-9003732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9020698-9020810:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9022635-9022883:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9034228-9034389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9035029-9035121:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9037089-9037172:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9037830-9038000:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9041736-9041834:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9043562-9043651:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9045812-9045956:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9046176-9046240:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9047033-9047188:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9047366-9047430:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9049926-9050034:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9062171-9062228:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9063144-9063347:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9064815-9064847:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9065555-9066721:1:exon

Atp9b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Atp9b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase IIB isoform X1
translation: MADQIPLYPVRSAAVATASHRRAAYYSAAGPGPGADRRGRYQLEDESAHLDEMPLMMSEEGFENDESDYHTLPRARITRRKRGLEWFVCGGWKFLCTSCCDWLINVCQRKKELKARTVWLGCPEKCEEKHPRNSIKNQKYNVFTFIPGVLYEQFKFFLNLYFLVVSCSQFVPALKIGYLYTYWAPLGFVLAVTIAREAIDEFRRFQRDKEMNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQRLPALGDLFSISAYVYAQKPQLDIHSFEGTFTREDSDPPIHESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVVLSVVMVTLQGFAGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDENIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGTDTMDEIHSHILHSHSQIHSQPSGHNPSSAPPKRSQSSTPKVKKSVSSRIHEAVKAIALCHNVTPVYEARAGITGETEFAEADQDFSDENRTYQASSPDEVALVRWTESVGLTLVSRDLASMQLKTPTGQILTYCILQMFPFTSESKRMGIIVRDESTAEITFYMKGADVAMSTIVQYNDWLEEECGNMAREGLRTLVVAKRTLTEEQYQDFESRYSQAKLSIHDRTLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDIHIFRPVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLRYYEHELVELACQCPAVVCCRCSPTQKAHIVTLLRQHTRKRTCAIGDGGNDVSMIQAADCGIGIEGKEGKQASLAADFSITQFRHIGRLLMVHGRNSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATIYTMFPVFSLVLDQDVKPEMAILYPELYKDLTKGRSLSFKTFLIWVLISIYQGGILMYGALLLFEAEFVHVVAISFTALILTELLMVALTIRTWHWLMVVAEFLSLGCYVASLAFLNEYFGIGRVSFGAFLDVAFITTVTFLWKVSAITVVSCLPLYVLKYLKRKLSPPSYSKLSS
SIO_010081: Atp9b
subclass of: SO_0000673
so part of: Atp9b
location: join(8874720..8874838,8890478..8890651,8895643..8895793,8898395..8898508,8911648..8911756,8919756..8919814,8927970..8928021,8939257..8939351,8951369..8951449,8953524..8953599,8961633..8961709,8987042..8987202,9003590..9003732,9020698..9020810,9022635..9022883,9034228..9034389,9035029..9035121,9037089..9037172,9037830..9038000,9041736..9041834,9043562..9043651,9045812..9045956,9046176..9046240,9047033..9047188,9047366..9047430,9049926..9050034,9062171..9062228,9063144..9063347,9064815..9064847,9065555..9065691)
location: region:8874720-9065691:1
so has part: feature:8874720-8874838:1:exon
so has part: feature:8890478-8890651:1:exon
so has part: feature:8895643-8895793:1:exon
so has part: feature:8898395-8898508:1:exon
so has part: feature:8911648-8911756:1:exon
so has part: feature:8919756-8919814:1:exon
so has part: feature:8927970-8928021:1:exon
so has part: feature:8939257-8939351:1:exon
so has part: feature:8951369-8951449:1:exon
so has part: feature:8953524-8953599:1:exon
so has part: feature:8961633-8961709:1:exon
so has part: feature:8987042-8987202:1:exon
so has part: feature:9003590-9003732:1:exon
so has part: feature:9020698-9020810:1:exon
so has part: feature:9022635-9022883:1:exon
so has part: feature:9034228-9034389:1:exon
so has part: feature:9035029-9035121:1:exon
so has part: feature:9037089-9037172:1:exon
so has part: feature:9037830-9038000:1:exon
so has part: feature:9041736-9041834:1:exon
so has part: feature:9043562-9043651:1:exon
so has part: feature:9045812-9045956:1:exon
so has part: feature:9046176-9046240:1:exon
so has part: feature:9047033-9047188:1:exon
so has part: feature:9047366-9047430:1:exon
so has part: feature:9049926-9050034:1:exon
so has part: feature:9062171-9062228:1:exon
so has part: feature:9063144-9063347:1:exon
so has part: feature:9064815-9064847:1:exon
so has part: feature:9065555-9065691:1:exon

XP_034373881.1
type: Protein
SIO_000068: ncbiprotein

position:8874720:1
position: 8874720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9065691:1
position: 9065691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8874720-8874838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8890478-8890651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8895643-8895793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8898395-8898508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8911648-8911756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8919756-8919814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8927970-8928021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8939257-8939351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8951369-8951449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8953524-8953599:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8961633-8961709:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8987042-8987202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9003590-9003732:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9020698-9020810:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9022635-9022883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9034228-9034389:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9035029-9035121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9037089-9037172:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9037830-9038000:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9041736-9041834:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9043562-9043651:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9045812-9045956:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9046176-9046240:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9047033-9047188:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9047366-9047430:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9049926-9050034:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9062171-9062228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9063144-9063347:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9064815-9064847:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:9065555-9065691:1:exon

Atp9b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Atp9b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase IIB isoform X2
translation: MADQIPLYPVRSAAVATASHRRAAYYSAAGPGPGADRRGRYQLEDESAHLDEMPLMMSEEGFENDESDYHTLPRARITRRKRGLEWFVCGGWKFLCTSCCDWLINVCQRKKELKARTVWLGCPEKCEEKHPRNSIKNQKYNVFTFIPGVLYEQFKFFLNLYFLVVSCSQFVPALKIGYLYTYWAPLGFVLAVTIAREAIDEFRRFQRDKEMNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQRLPALGDLFSISAYVYAQKPQLDIHSFEGTFTREDSDPPIHESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVVLSVVMVTLQGFAGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDENIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGTDTMDEIHSHILHSHSQIHSQPSGHNPSSAPPKRSQSSTPKVKKSVSSRIHEAVKAIALCHNVTPVYEARAGITGETEFAEADQDFSDENRTYQASSPDEVALVRWTESVGLTLVSRDLASMQLKTPTGQILTYCILQMFPFTSESKRMGIIVRDESTAEITFYMKGADVAMSTIVQYNDWLEEECGNMAREGLRTLVVAKRTLTEEQYQDFESRYSQAKLSIHDRTLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDIHIFRPVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLRYYEHELVELACQCPAVVCCRCSPTQKAHIVTLLRQHTRKRTCAIGDGGNDVSMIQAADCGIGIEGKEGKQASLAADFSITQFRHIGRLLMVHGRNSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATIYTMFPVFSLVLDQDVKPEMAILYPELYKDLTKGRSLSFKTFLIWVLISIYQGGILMYGALLLFEAEFVHVVAISFTALILTELLMVALTIRTWHWLMVVAEFLSLGCYVASLAFLNEYFDVAFITTVTFLWKVSAITVVSCLPLYVLKYLKRKLSPPSYSKLSS
SIO_010081: Atp9b
subclass of: SO_0000673
so part of: Atp9b
location: join(8874720..8874838,8890478..8890651,8895643..8895793,8898395..8898508,8911648..8911756,8919756..8919814,8927970..8928021,8939257..8939351,8951369..8951449,8953524..8953599,8961633..8961709,8987042..8987202,9003590..9003732,9020698..9020810,9022635..9022883,9034228..9034389,9035029..9035121,9037089..9037172,9037830..9038000,9041736..9041834,9043562..9043651,9045812..9045956,9046176..9046240,9047033..9047188,9047366..9047430,9049926..9050034,9062171..9062228,9063144..9063347,9065555..9065691)
location: region:8874720-9065691:1
so has part: feature:8874720-8874838:1:exon
so has part: feature:8890478-8890651:1:exon
so has part: feature:8895643-8895793:1:exon
so has part: feature:8898395-8898508:1:exon
so has part: feature:8911648-8911756:1:exon
so has part: feature:8919756-8919814:1:exon
so has part: feature:8927970-8928021:1:exon
so has part: feature:8939257-8939351:1:exon
so has part: feature:8951369-8951449:1:exon
so has part: feature:8953524-8953599:1:exon
so has part: feature:8961633-8961709:1:exon
so has part: feature:8987042-8987202:1:exon
so has part: feature:9003590-9003732:1:exon
so has part: feature:9020698-9020810:1:exon
so has part: feature:9022635-9022883:1:exon
so has part: feature:9034228-9034389:1:exon
so has part: feature:9035029-9035121:1:exon
so has part: feature:9037089-9037172:1:exon
so has part: feature:9037830-9038000:1:exon
so has part: feature:9041736-9041834:1:exon
so has part: feature:9043562-9043651:1:exon
so has part: feature:9045812-9045956:1:exon
so has part: feature:9046176-9046240:1:exon
so has part: feature:9047033-9047188:1:exon
so has part: feature:9047366-9047430:1:exon
so has part: feature:9049926-9050034:1:exon
so has part: feature:9062171-9062228:1:exon
so has part: feature:9063144-9063347:1:exon
so has part: feature:9065555-9065691:1:exon

XP_034373882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8874720-8874838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8890478-8890651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8895643-8895793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8898395-8898508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8911648-8911756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8919756-8919814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8927970-8928021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8939257-8939351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8951369-8951449:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8953524-8953599:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8961633-8961709:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8987042-8987202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9003590-9003732:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9020698-9020810:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9022635-9022883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9034228-9034389:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9035029-9035121:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9037089-9037172:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9037830-9038000:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9041736-9041834:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9043562-9043651:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9045812-9045956:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9046176-9046240:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9047033-9047188:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9047366-9047430:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9049926-9050034:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9062171-9062228:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9063144-9063347:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9065555-9065691:1:exon

Atp9b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Atp9b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable phospholipid-transporting ATPase IIB isoform X3
translation: MADQIPLYPVRSAAVATASHRRAAYYSAAGPGPGADRRGRYQLEDESAHLDEMPLMMSEEGFENDESDYHTLPRARITRRKRGLEWFVCGGWKFLCTSCCDWLINVCQRKKELKARTVWLGCPEKCEEKHPRNSIKNQKYNVFTFIPGVLYEQFKFFLNLYFLVVSCSQFVPALKIGYLYTYWAPLGFVLAVTIAREAIDEFRRFQRDKEMNSQLYSKLTVRGKVQVKSSDIQVGDLIIVEKNQRIPSDMVFLRTSEKAGSCFIRTDQLDGETDWKLKVAVSCTQRLPALGEDSDPPIHESLSIENTLWASTVVASGTVIGVVIYTGKETRSVMNTSNPKNKVGLLDLELNQLTKALFLALVVLSVVMVTLQGFAGPWYRNLFRFLLLFSYIIPISLRVNLDMGKAAYGWMIMKDENIPGTVVRTSTIPEELGRLVYLLTDKTGTLTQNEMVFKRLHLGTVSYGTDTMDEIHSHILHSHSQIHSQPSGHNPSSAPPKRSQSSTPKVKKSVSSRIHEAVKAIALCHNVTPVYEARAGITGETEFAEADQDFSDENRTYQASSPDEVALVRWTESVGLTLVSRDLASMQLKTPTGQILTYCILQMFPFTSESKRMGIIVRDESTAEITFYMKGADVAMSTIVQYNDWLEEECGNMAREGLRTLVVAKRTLTEEQYQDFESRYSQAKLSIHDRTLKVAAVVESLEREMELLCLTGVEDQLQADVRPTLEMLRNAGIKIWMLTGDKLETATCIAKSSHLVSRTQDIHIFRPVTSRGEAHLELNAFRRKHDCALVISGDSLEVCLRYYEHELVELACQCPAVVCCRCSPTQKAHIVTLLRQHTRKRTCAIGDGGNDVSMIQAADCGIGIEGKEGKQASLAADFSITQFRHIGRLLMVHGRNSYKRSAALGQFVMHRGLIISTMQAVFSSVFYFASVPLYQGFLMVGYATIYTMFPVFSLVLDQDVKPEMAILYPELYKDLTKGRSLSFKTFLIWVLISIYQGGILMYGALLLFEAEFVHVVAISFTALILTELLMVALTIRTWHWLMVVAEFLSLGCYVASLAFLNEYFGIGRVSFGAFLDVAFITTVTFLWKVSAITVVSCLPLYVLKYLKRKLSPPSYSKLSS
SIO_010081: Atp9b
subclass of: SO_0000673
so part of: Atp9b
location: join(8874720..8874838,8890478..8890651,8895643..8895793,8898395..8898508,8911648..8911756,8919756..8919814,8927970..8928021,8939257..8939351,8953524..8953599,8961633..8961709,8987042..8987202,9003590..9003732,9020698..9020810,9022635..9022883,9034228..9034389,9035029..9035121,9037089..9037172,9037830..9038000,9041736..9041834,9043562..9043651,9045812..9045956,9046176..9046240,9047033..9047188,9047366..9047430,9049926..9050034,9062171..9062228,9063144..9063347,9064815..9064847,9065555..9065691)
location: region:8874720-9065691:1
so has part: feature:8874720-8874838:1:exon
so has part: feature:8890478-8890651:1:exon
so has part: feature:8895643-8895793:1:exon
so has part: feature:8898395-8898508:1:exon
so has part: feature:8911648-8911756:1:exon
so has part: feature:8919756-8919814:1:exon
so has part: feature:8927970-8928021:1:exon
so has part: feature:8939257-8939351:1:exon
so has part: feature:8953524-8953599:1:exon
so has part: feature:8961633-8961709:1:exon
so has part: feature:8987042-8987202:1:exon
so has part: feature:9003590-9003732:1:exon
so has part: feature:9020698-9020810:1:exon
so has part: feature:9022635-9022883:1:exon
so has part: feature:9034228-9034389:1:exon
so has part: feature:9035029-9035121:1:exon
so has part: feature:9037089-9037172:1:exon
so has part: feature:9037830-9038000:1:exon
so has part: feature:9041736-9041834:1:exon
so has part: feature:9043562-9043651:1:exon
so has part: feature:9045812-9045956:1:exon
so has part: feature:9046176-9046240:1:exon
so has part: feature:9047033-9047188:1:exon
so has part: feature:9047366-9047430:1:exon
so has part: feature:9049926-9050034:1:exon
so has part: feature:9062171-9062228:1:exon
so has part: feature:9063144-9063347:1:exon
so has part: feature:9064815-9064847:1:exon
so has part: feature:9065555-9065691:1:exon

XP_034373883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8874720-8874838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8890478-8890651:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8895643-8895793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8898395-8898508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8911648-8911756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8919756-8919814:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8927970-8928021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8939257-8939351:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8953524-8953599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8961633-8961709:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8987042-8987202:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9003590-9003732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9020698-9020810:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9022635-9022883:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9034228-9034389:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9035029-9035121:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9037089-9037172:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9037830-9038000:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9041736-9041834:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9043562-9043651:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9045812-9045956:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9046176-9046240:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9047033-9047188:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9047366-9047430:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9049926-9050034:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9062171-9062228:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9063144-9063347:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9064815-9064847:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9065555-9065691:1:exon

Nfatc1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Nfatc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9093019..9197711
location: region:9093019-9197711:1
so has part: feature:9093019-9197711:1:exon
subclass of: SO_0000010

117719854
type: Gene
SIO_000068: ncbigene

position:9093019:1
position: 9093019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9197711:1
position: 9197711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9093019-9197711:1:exon

Nfatc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nfatc1
product: nuclear factor of activated T cells 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034518233.1
SIO_010081: Nfatc1
subclass of: SO_0000673
so part of: Nfatc1
location: join(9093019..9093152,9102377..9103478,9118944..9119103,9136491..9136693,9138152..9138324,9140112..9140252,9150242..9150297,9154044..9154176,9167581..9168255,9195913..9197711)
location: region:9093019-9197711:1
so has part: feature:9093019-9093152:1:exon
so has part: feature:9102377-9103478:1:exon
so has part: feature:9118944-9119103:1:exon
so has part: feature:9136491-9136693:1:exon
so has part: feature:9138152-9138324:1:exon
so has part: feature:9140112-9140252:1:exon
so has part: feature:9150242-9150297:1:exon
so has part: feature:9154044-9154176:1:exon
so has part: feature:9167581-9168255:1:exon
so has part: feature:9195913-9197711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9093019-9093152:1:exon

position:9093152:1
position: 9093152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9102377-9103478:1:exon

position:9102377:1
position: 9102377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9103478:1
position: 9103478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9118944-9119103:1:exon

position:9118944:1
position: 9118944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9119103:1
position: 9119103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9136491-9136693:1:exon

position:9136491:1
position: 9136491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9136693:1
position: 9136693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9138152-9138324:1:exon

position:9138152:1
position: 9138152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9138324:1
position: 9138324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9140112-9140252:1:exon

position:9140112:1
position: 9140112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9140252:1
position: 9140252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9150242-9150297:1:exon

position:9150242:1
position: 9150242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9150297:1
position: 9150297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9154044-9154176:1:exon

position:9154044:1
position: 9154044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9154176:1
position: 9154176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9167581-9168255:1:exon

position:9167581:1
position: 9167581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9168255:1
position: 9168255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9195913-9197711:1:exon

position:9195913:1
position: 9195913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nfatc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nfatc1
product: nuclear factor of activated T cells 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 30 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034518234.1
SIO_010081: Nfatc1
subclass of: SO_0000673
so part of: Nfatc1
location: join(9093019..9093152,9102377..9103478,9118944..9119103,9136491..9136693,9138152..9138324,9140112..9140252,9150242..9150297,9154044..9154176,9167581..9167966,9195913..9197711)
location: region:9093019-9197711:1
so has part: feature:9093019-9093152:1:exon
so has part: feature:9102377-9103478:1:exon
so has part: feature:9118944-9119103:1:exon
so has part: feature:9136491-9136693:1:exon
so has part: feature:9138152-9138324:1:exon
so has part: feature:9140112-9140252:1:exon
so has part: feature:9150242-9150297:1:exon
so has part: feature:9154044-9154176:1:exon
so has part: feature:9167581-9167966:1:exon
so has part: feature:9195913-9197711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9093019-9093152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9102377-9103478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9118944-9119103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9136491-9136693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9138152-9138324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9140112-9140252:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9150242-9150297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9154044-9154176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9167581-9167966:1:exon

position:9167966:1
position: 9167966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9195913-9197711:1:exon

Nfatc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nfatc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
translation: MTGLEQDPEFDFDFLFEFDQSGGGAAAAEHYNYAPPSVTSTLPLPTAHPALPAACHDLQTSTSGISAVPSANHPSSYGGAVDSGPSGYFLSSGNTRPNGAPTLESPRIEITSYLGLHHGGSQFFHDVEVEDVLPSCKRSPSTATLHLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQSPCVSPKTTDPEEGFPRSLGACHLLGSPRHSPSTSPRASVTEESWLGARGSRPTSPCNKRKYSLNGRQPSCSPHHSPTPSPHGSPRVSVTEDTWLGNTTQYTSSAIVAAINALTTDSTLDLGDGVPVKSRKTALEHAPSVALKVEPAGEDLGTTPPTSDFPPEEFTFQHLRKGAFCEQYLSVPQASYQWAKPKSLSPTSYMSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPVVQLHGYLENEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSTDSYPVIGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCKPNSLVVEIPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANVPIIKTEPTDDFEPALTCGPMSQGLSPLPRPYYSQQLTMPPDPGSCLVAGFAPCSQRNTLMPTPPNASPKLHDLSSPAYTKGLTNPGHSGHLGLQPPASEAPTMQEVPRPMAIQPNSPEQPPSARLQPQVSPHLNSSCPLGRQQVLCPNSPPSPLPSAAHEPTCLQPSALPPDVGHRQQQLQKAQGNGSPAVLPEVREDSDHNLAPIPVVIKQEPEELDQLYLDDVNEIIRNDLSSTIPHS
SIO_010081: Nfatc1
subclass of: SO_0000673
so part of: Nfatc1
location: join(9093068..9093152,9102377..9103478,9118944..9119103,9136491..9136693,9138152..9138324,9140112..9140252,9150242..9150297,9154044..9154176,9167581..9168255,9195913..9195962)
location: region:9093068-9195962:1
so has part: feature:9093068-9093152:1:exon
so has part: feature:9102377-9103478:1:exon
so has part: feature:9118944-9119103:1:exon
so has part: feature:9136491-9136693:1:exon
so has part: feature:9138152-9138324:1:exon
so has part: feature:9140112-9140252:1:exon
so has part: feature:9150242-9150297:1:exon
so has part: feature:9154044-9154176:1:exon
so has part: feature:9167581-9168255:1:exon
so has part: feature:9195913-9195962:1:exon

XP_034374124.1
type: Protein
SIO_000068: ncbiprotein

position:9093068:1
position: 9093068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9195962:1
position: 9195962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9093068-9093152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9102377-9103478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9118944-9119103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9136491-9136693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9138152-9138324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9140112-9140252:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9150242-9150297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9154044-9154176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9167581-9168255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9195913-9195962:1:exon

Nfatc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nfatc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells, cytoplasmic 1 isoform X2
translation: MTGLEQDPEFDFDFLFEFDQSGGGAAAAEHYNYAPPSVTSTLPLPTAHPALPAACHDLQTSTSGISAVPSANHPSSYGGAVDSGPSGYFLSSGNTRPNGAPTLESPRIEITSYLGLHHGGSQFFHDVEVEDVLPSCKRSPSTATLHLPSLEAYRDPSCLSPASSLSSRSCNSEASSYESNYSYPYASPQTSPWQSPCVSPKTTDPEEGFPRSLGACHLLGSPRHSPSTSPRASVTEESWLGARGSRPTSPCNKRKYSLNGRQPSCSPHHSPTPSPHGSPRVSVTEDTWLGNTTQYTSSAIVAAINALTTDSTLDLGDGVPVKSRKTALEHAPSVALKVEPAGEDLGTTPPTSDFPPEEFTFQHLRKGAFCEQYLSVPQASYQWAKPKSLSPTSYMSPSLPALDWQLPSHSGPYELRIEVQPKSHHRAHYETEGSRGAVKASAGGHPVVQLHGYLENEPLTLQLFIGTADDRLLRPHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPLLPENNMRAIIDCAGILKLRNSDIELRKGETDIGRKNTRVRLVFRVHIPQPNGRTLSLQVASNPIECSQRSAQELPLVEKQSTDSYPVIGGKKMVLSGHNFLQDSKVIFVEKAPDGHHVWEMEAKTDRDLCKPNSLVVEIPPFRNQRITSPVQVSFYVCNGKRKRSQYQHFTYLPANVPIIKTEPTDDFEPALTCGPMSQGLSPLPRPYYSQQLTMPPDPGSCLVAGFAPCSQRNTLMPTPPNASPKLHDLSSPAYTKGLTNPGHSGHLGLQPPASEAPTMQEVPRPMAIQPNSPEQPPSARLQPQ
SIO_010081: Nfatc1
subclass of: SO_0000673
so part of: Nfatc1
location: join(9093068..9093152,9102377..9103478,9118944..9119103,9136491..9136693,9138152..9138324,9140112..9140252,9150242..9150297,9154044..9154176,9167581..9167966,9195913..9195915)
location: region:9093068-9195915:1
so has part: feature:9093068-9093152:1:exon
so has part: feature:9102377-9103478:1:exon
so has part: feature:9118944-9119103:1:exon
so has part: feature:9136491-9136693:1:exon
so has part: feature:9138152-9138324:1:exon
so has part: feature:9140112-9140252:1:exon
so has part: feature:9150242-9150297:1:exon
so has part: feature:9154044-9154176:1:exon
so has part: feature:9167581-9167966:1:exon
so has part: feature:9195913-9195915:1:exon

XP_034374125.1
type: Protein
SIO_000068: ncbiprotein

position:9195915:1
position: 9195915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9093068-9093152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9102377-9103478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9118944-9119103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9136491-9136693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9138152-9138324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9140112-9140252:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9150242-9150297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9154044-9154176:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9167581-9167966:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9195913-9195915:1:exon

Ctdp1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ctdp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9314609..9368710
location: region:9314609-9368710:1
so has part: feature:9314609-9368710:1:exon
subclass of: SO_0000010

117720008
type: Gene
SIO_000068: ncbigene

position:9314609:1
position: 9314609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9368710:1
position: 9368710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9314609-9368710:1:exon

Ctdp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ctdp1
product: CTD phosphatase subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 long SRA read, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518480.1
SIO_010081: Ctdp1
subclass of: SO_0000673
so part of: Ctdp1
location: join(9314609..9315069,9324168..9324251,9324885..9324978,9325375..9325503,9327951..9328101,9332414..9332504,9334315..9334481,9335574..9336617,9337505..9337646,9338999..9339208,9350933..9351095,9358848..9359035,9367927..9368710)
location: region:9314609-9368710:1
so has part: feature:9314609-9315069:1:exon
so has part: feature:9324168-9324251:1:exon
so has part: feature:9324885-9324978:1:exon
so has part: feature:9325375-9325503:1:exon
so has part: feature:9327951-9328101:1:exon
so has part: feature:9332414-9332504:1:exon
so has part: feature:9334315-9334481:1:exon
so has part: feature:9335574-9336617:1:exon
so has part: feature:9337505-9337646:1:exon
so has part: feature:9338999-9339208:1:exon
so has part: feature:9350933-9351095:1:exon
so has part: feature:9358848-9359035:1:exon
so has part: feature:9367927-9368710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9314609-9315069:1:exon

position:9315069:1
position: 9315069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9324168-9324251:1:exon

position:9324168:1
position: 9324168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9324251:1
position: 9324251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9324885-9324978:1:exon

position:9324885:1
position: 9324885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9324978:1
position: 9324978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9325375-9325503:1:exon

position:9325375:1
position: 9325375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9325503:1
position: 9325503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9327951-9328101:1:exon

position:9327951:1
position: 9327951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9328101:1
position: 9328101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9332414-9332504:1:exon

position:9332414:1
position: 9332414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9332504:1
position: 9332504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9334315-9334481:1:exon

position:9334315:1
position: 9334315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9334481:1
position: 9334481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9335574-9336617:1:exon

position:9335574:1
position: 9335574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9336617:1
position: 9336617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9337505-9337646:1:exon

position:9337505:1
position: 9337505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9337646:1
position: 9337646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9338999-9339208:1:exon

position:9338999:1
position: 9338999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9339208:1
position: 9339208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9350933-9351095:1:exon

position:9350933:1
position: 9350933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9351095:1
position: 9351095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9358848-9359035:1:exon

position:9358848:1
position: 9358848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9359035:1
position: 9359035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9367927-9368710:1:exon

position:9367927:1
position: 9367927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ctdp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ctdp1
product: CTD phosphatase subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 long SRA read, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034518481.1
SIO_010081: Ctdp1
subclass of: SO_0000673
so part of: Ctdp1
location: join(9314613..9315069,9324168..9324251,9324885..9324978,9325375..9325503,9327951..9328101,9332414..9332504,9334315..9334481,9335574..9336617,9337505..9337646,9338999..9339208,9358848..9359035,9367927..9368710)
location: region:9314613-9368710:1
so has part: feature:9314613-9315069:1:exon
so has part: feature:9324168-9324251:1:exon
so has part: feature:9324885-9324978:1:exon
so has part: feature:9325375-9325503:1:exon
so has part: feature:9327951-9328101:1:exon
so has part: feature:9332414-9332504:1:exon
so has part: feature:9334315-9334481:1:exon
so has part: feature:9335574-9336617:1:exon
so has part: feature:9337505-9337646:1:exon
so has part: feature:9338999-9339208:1:exon
so has part: feature:9358848-9359035:1:exon
so has part: feature:9367927-9368710:1:exon

position:9314613:1
position: 9314613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9314613-9315069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9324168-9324251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9324885-9324978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9325375-9325503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9327951-9328101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9332414-9332504:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9334315-9334481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9335574-9336617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9337505-9337646:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9338999-9339208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9358848-9359035:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9367927-9368710:1:exon

Ctdp1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: Ctdp1
product: CTD phosphatase subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004608252.1
SIO_010081: Ctdp1
so part of: Ctdp1
location: join(9314630..9315069,9324168..9324251,9324885..9324978,9325375..9325503,9327951..9328101,9332414..9332504,9334315..9334481,9335574..9336617,9337505..9337646,9338999..9339208,9342983..9343143,9350933..9351095,9358848..9359035,9367927..9368710)
location: region:9314630-9368710:1
so has part: feature:9314630-9315069:1:exon
so has part: feature:9324168-9324251:1:exon
so has part: feature:9324885-9324978:1:exon
so has part: feature:9325375-9325503:1:exon
so has part: feature:9327951-9328101:1:exon
so has part: feature:9332414-9332504:1:exon
so has part: feature:9334315-9334481:1:exon
so has part: feature:9335574-9336617:1:exon
so has part: feature:9337505-9337646:1:exon
so has part: feature:9338999-9339208:1:exon
so has part: feature:9342983-9343143:1:exon
so has part: feature:9350933-9351095:1:exon
so has part: feature:9358848-9359035:1:exon
so has part: feature:9367927-9368710:1:exon

position:9314630:1
position: 9314630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9314630-9315069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9324168-9324251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9324885-9324978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9325375-9325503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9327951-9328101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9332414-9332504:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9334315-9334481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9335574-9336617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9337505-9337646:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9338999-9339208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9342983-9343143:1:exon

position:9342983:1
position: 9342983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9343143:1
position: 9343143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9350933-9351095:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9358848-9359035:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9367927-9368710:1:exon

Ctdp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ctdp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
translation: MEVPPSASVPNECTPAVAGAEVRCPGPTPLRLLEWKVAAGATVRIGSVLAVCEAAVSAQPAGPAPTRAASGGCVRAARAERRLRSERAGVVRELCAQPGQVVAPGALLVRLEGCSHPVVMKGLCAECGQDLTQLQSQNGKQQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCPQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFPGTGDVNAPPGARESQTRKKVNHSSKGADVLEQALSVKDPEEGRPTPGAEQSNGLGKASRELNGGEAVPGALPSKTDEKETCSLTRASPASSSSGHKLTEAPELPVSCEWDSRTTPGVQPAQGDATQDLDFDLSSDSETSESSRSEGQKSCSASDGESEERRCRRKSPATQDRTKVPQHSGPQDTSGGRSAASPLGESSIHPHDKGPDLDTQEESERDSLCGLGNGSVDRKEAETESQNSEQSGVTAGESLDQSVGEEEEEDTDDDDHLIHLEEILVRVHTDYYTKYDRFLNKELEEAPDIRKIVPELKSKVLADVVVIFSGLHPTNFPVEKTREHYHATALGAKVLTQLVLSPDAPDRATHLIAARAGTEKVRQAQECKHLHVVSPDWLWSCLERWDKVEEQLFPLVDDDAQTHRGNSPAAFPDRHNVLPTALFHPTPIHSKAHPGPEVRIYDSNTGKLIRMGTQGSAAAPSSAPLIHGEPSSFRAVQPQQQQMFGEELPESQDGEQPGPARRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDDSDIERKKPEDQDNEQERAPKPRKPRAPGIRREQPVGLPSSGERSATAMRGPRGHKRKLNEEDAASESSGESSNDDEEGSSSEADEMAAALEAELNDLI
SIO_010081: Ctdp1
subclass of: SO_0000673
so part of: Ctdp1
location: join(9314756..9315069,9324168..9324251,9324885..9324978,9325375..9325503,9327951..9328101,9332414..9332504,9334315..9334481,9335574..9336617,9337505..9337646,9338999..9339208,9350933..9351095,9358848..9359035,9367927..9368068)
location: region:9314756-9368068:1
so has part: feature:9314756-9315069:1:exon
so has part: feature:9324168-9324251:1:exon
so has part: feature:9324885-9324978:1:exon
so has part: feature:9325375-9325503:1:exon
so has part: feature:9327951-9328101:1:exon
so has part: feature:9332414-9332504:1:exon
so has part: feature:9334315-9334481:1:exon
so has part: feature:9335574-9336617:1:exon
so has part: feature:9337505-9337646:1:exon
so has part: feature:9338999-9339208:1:exon
so has part: feature:9350933-9351095:1:exon
so has part: feature:9358848-9359035:1:exon
so has part: feature:9367927-9368068:1:exon

XP_034374371.1
type: Protein
SIO_000068: ncbiprotein

position:9314756:1
position: 9314756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9368068:1
position: 9368068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9314756-9315069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9324168-9324251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9324885-9324978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9325375-9325503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9327951-9328101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9332414-9332504:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9334315-9334481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9335574-9336617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9337505-9337646:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9338999-9339208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9350933-9351095:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9358848-9359035:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9367927-9368068:1:exon

Ctdp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ctdp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA polymerase II subunit A C-terminal domain phosphatase isoform X2
translation: MEVPPSASVPNECTPAVAGAEVRCPGPTPLRLLEWKVAAGATVRIGSVLAVCEAAVSAQPAGPAPTRAASGGCVRAARAERRLRSERAGVVRELCAQPGQVVAPGALLVRLEGCSHPVVMKGLCAECGQDLTQLQSQNGKQQVPLSTATVSMVHSVPELMVSSEQAEKLGREDQQRLHRNRKLVLMVDLDQTLIHTTEQHCPQMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLITVKKYVYFPGTGDVNAPPGARESQTRKKVNHSSKGADVLEQALSVKDPEEGRPTPGAEQSNGLGKASRELNGGEAVPGALPSKTDEKETCSLTRASPASSSSGHKLTEAPELPVSCEWDSRTTPGVQPAQGDATQDLDFDLSSDSETSESSRSEGQKSCSASDGESEERRCRRKSPATQDRTKVPQHSGPQDTSGGRSAASPLGESSIHPHDKGPDLDTQEESERDSLCGLGNGSVDRKEAETESQNSEQSGVTAGESLDQSVGEEEEEDTDDDDHLIHLEEILVRVHTDYYTKYDRFLNKELEEAPDIRKIVPELKSKVLADVVVIFSGLHPTNFPVEKTREHYHATALGAKVLTQLVLSPDAPDRATHLIAARAGTEKVRQAQECKHLHVVSPDWLWSCLERWDKVEEQLFPLVDDDAQTHRGNSPAAFPDRHNVLPTALFHPTPIHSKAHPGPEVRIYDSNTGKLIRMGTQGSAAAPSSAPLIHGEPSSFRSMTSLEKAVMTVTSRGRSQKTKTMNRREHRSPGSPGPQGSEESSL
SIO_010081: Ctdp1
subclass of: SO_0000673
so part of: Ctdp1
location: join(9314756..9315069,9324168..9324251,9324885..9324978,9325375..9325503,9327951..9328101,9332414..9332504,9334315..9334481,9335574..9336617,9337505..9337646,9338999..9339208,9358848..9358986)
location: region:9314756-9358986:1
so has part: feature:9314756-9315069:1:exon
so has part: feature:9324168-9324251:1:exon
so has part: feature:9324885-9324978:1:exon
so has part: feature:9325375-9325503:1:exon
so has part: feature:9327951-9328101:1:exon
so has part: feature:9332414-9332504:1:exon
so has part: feature:9334315-9334481:1:exon
so has part: feature:9335574-9336617:1:exon
so has part: feature:9337505-9337646:1:exon
so has part: feature:9338999-9339208:1:exon
so has part: feature:9358848-9358986:1:exon

XP_034374372.1
type: Protein
SIO_000068: ncbiprotein

position:9358986:1
position: 9358986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9314756-9315069:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9324168-9324251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9324885-9324978:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9325375-9325503:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9327951-9328101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9332414-9332504:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9334315-9334481:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9335574-9336617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9337505-9337646:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9338999-9339208:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9358848-9358986:1:exon

Kcng2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Kcng2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9410253..9478861
location: region:9410253-9478861:1
so has part: feature:9410253-9478861:1:exon
subclass of: SO_0000010

117719886
type: Gene
SIO_000068: ncbigene

position:9410253:1
position: 9410253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9478861:1
position: 9478861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9410253-9478861:1:exon

Kcng2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Kcng2
product: potassium voltage-gated channel modifier subfamily G member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 10 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034518285.1
SIO_010081: Kcng2
subclass of: SO_0000673
so part of: Kcng2
location: join(9410253..9410285,9449087..9449784,9477010..9478861)
location: region:9410253-9478861:1
so has part: feature:9410253-9410285:1:exon
so has part: feature:9449087-9449784:1:exon
so has part: feature:9477010-9478861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9410253-9410285:1:exon

position:9410285:1
position: 9410285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9449087-9449784:1:exon

position:9449087:1
position: 9449087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9449784:1
position: 9449784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9477010-9478861:1:exon

position:9477010:1
position: 9477010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Kcng2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Kcng2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily G member 2
translation: MARLPGHPEAPGAEPGSAGRGARGGRGARARHVIINVGGCRVRLAWAALARCPLARLERLRACRGHDELLRVCDDYDVSRDEFFFDRSPCAFRAIVALLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCCLRRLRRREEEAAEASAAPPARGPPSSPGRARGSGRLERGRRRLRDVVENPHSGLAGKLFAYVSVAFVAVTAVGLCLSTMPDVRAEEERGECSTKCRNLFVLETVCVAWFSFEFLLRSLQAESKCAFLRTPLAIIDILAILPFYVSLLAGLAAGPTGSKMLERAGLVLRLLRALRVLYVMRLARHSLGLRSLGLTVRRCAREFGLLLLFLCVAMALFAPLVHLAERELGAHRDFSSVPASYWWAVISMTTVGYGDMVPRSLPGQVVALSSILSGILLMAFPVTSIFHTFSRSYSELKEQQQRAASPEPALREDSTRDDSTRSASATEDSSQETAGAAGSSPGRVGP
SIO_010081: Kcng2
subclass of: SO_0000673
so part of: Kcng2
location: join(9449122..9449784,9477010..9477783)
location: region:9449122-9477783:1
so has part: feature:9449122-9449784:1:exon
so has part: feature:9477010-9477783:1:exon

XP_034374176.1
type: Protein
SIO_000068: ncbiprotein

position:9449122:1
position: 9449122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9477783:1
position: 9477783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9449122-9449784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9477010-9477783:1:exon

Slc66a2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slc66a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9480460..9517159)
location: region:9480460-9517159:-1
so has part: feature:9480460-9517159:-1:exon
subclass of: SO_0000010

117720137
type: Gene
SIO_000068: ncbigene

position:9480460:-1
position: 9480460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9517159:-1
position: 9517159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9480460-9517159:-1:exon

Slc66a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc66a2
product: solute carrier family 66 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518603.1
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9480460..9481587,9488492..9488708,9499920..9499973,9508732..9508865,9515255..9515591,9516936..9517157))
location: region:9480460-9517157:-1
so has part: feature:9516936-9517157:-1:exon
so has part: feature:9515255-9515591:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9499920-9499973:-1:exon
so has part: feature:9488492-9488708:-1:exon
so has part: feature:9480460-9481587:-1:exon

position:9517157:-1
position: 9517157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9516936-9517157:-1:exon

position:9516936:-1
position: 9516936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9515255-9515591:-1:exon

position:9515255:-1
position: 9515255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9515591:-1
position: 9515591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9508732-9508865:-1:exon

position:9508732:-1
position: 9508732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9508865:-1
position: 9508865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9499920-9499973:-1:exon

position:9499920:-1
position: 9499920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9499973:-1
position: 9499973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9488492-9488708:-1:exon

position:9488492:-1
position: 9488492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9488708:-1
position: 9488708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9480460-9481587:-1:exon

position:9481587:-1
position: 9481587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Slc66a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc66a2
product: solute carrier family 66 member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, 5 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034518605.1
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9480460..9481587,9488492..9488708,9508732..9508865,9515255..9515591,9516055..9516147))
location: region:9480460-9516147:-1
so has part: feature:9516055-9516147:-1:exon
so has part: feature:9515255-9515591:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9488492-9488708:-1:exon
so has part: feature:9480460-9481587:-1:exon

position:9516147:-1
position: 9516147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9516055-9516147:-1:exon

position:9516055:-1
position: 9516055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9515255-9515591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9508732-9508865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9488492-9488708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9480460-9481587:-1:exon

Slc66a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc66a2
product: solute carrier family 66 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034518602.1
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9480460..9481587,9488492..9488708,9499920..9499973,9508732..9508865,9515255..9515591,9516055..9516126))
location: region:9480460-9516126:-1
so has part: feature:9516055-9516126:-1:exon
so has part: feature:9515255-9515591:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9499920-9499973:-1:exon
so has part: feature:9488492-9488708:-1:exon
so has part: feature:9480460-9481587:-1:exon

position:9516126:-1
position: 9516126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9516055-9516126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9515255-9515591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9508732-9508865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9499920-9499973:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9488492-9488708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9480460-9481587:-1:exon

Slc66a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc66a2
product: solute carrier family 66 member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518604.1
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9480543..9481587,9488492..9488708,9508732..9508865,9515255..9515591,9516936..9517156))
location: region:9480543-9517156:-1
so has part: feature:9516936-9517156:-1:exon
so has part: feature:9515255-9515591:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9488492-9488708:-1:exon
so has part: feature:9480543-9481587:-1:exon

position:9480543:-1
position: 9480543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9517156:-1
position: 9517156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9516936-9517156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9515255-9515591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9508732-9508865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9488492-9488708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9480543-9481587:-1:exon

Slc66a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc66a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 66 member 2 isoform X2
translation: MEAEGLDWLLVPLHQLVSWVAAGAMVFGGVVPYIPQYRDIRRTQNADGFSTHVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNIKRRSFADFDPHHFWHWSSFADYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNYRHRSTEGMSLKMVLMWTSGDTFKTAYFLLNGAPLQFSVCGLLQVMVDLAILGQAYAFAHHPQKPAAHAVHPASAKAL
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9481380..9481587,9488492..9488708,9508732..9508865,9515255..9515457))
location: region:9481380-9515457:-1
so has part: feature:9515255-9515457:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9488492-9488708:-1:exon
so has part: feature:9481380-9481587:-1:exon

XP_034374495.1
type: Protein
SIO_000068: ncbiprotein

position:9481380:-1
position: 9481380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9515457:-1
position: 9515457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9515255-9515457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9508732-9508865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9488492-9488708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9481380-9481587:-1:exon

Slc66a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc66a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 66 member 2 isoform X2
translation: MEAEGLDWLLVPLHQLVSWVAAGAMVFGGVVPYIPQYRDIRRTQNADGFSTHVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNIKRRSFADFDPHHFWHWSSFADYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNYRHRSTEGMSLKMVLMWTSGDTFKTAYFLLNGAPLQFSVCGLLQVMVDLAILGQAYAFAHHPQKPAAHAVHPASAKAL
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9481380..9481587,9488492..9488708,9508732..9508865,9515255..9515457))
location: region:9481380-9515457:-1
so has part: feature:9515255-9515457:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9488492-9488708:-1:exon
so has part: feature:9481380-9481587:-1:exon

XP_034374496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9515255-9515457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9508732-9508865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9488492-9488708:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9481380-9481587:-1:exon

Slc66a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc66a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 66 member 2 isoform X1
translation: MEAEGLDWLLVPLHQLVSWVAAGAMVFGGVVPYIPQYRDIRRTQNADGFSTHVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNIKRRSFAATDSKDEELRVPPRRPYLDFDPHHFWHWSSFADYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNYRHRSTEGMSLKMVLMWTSGDTFKTAYFLLNGAPLQFSVCGLLQVMVDLAILGQAYAFAHHPQKPAAHAVHPASAKAL
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9481380..9481587,9488492..9488708,9499920..9499973,9508732..9508865,9515255..9515457))
location: region:9481380-9515457:-1
so has part: feature:9515255-9515457:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9499920-9499973:-1:exon
so has part: feature:9488492-9488708:-1:exon
so has part: feature:9481380-9481587:-1:exon

XP_034374493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9515255-9515457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9508732-9508865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9499920-9499973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9488492-9488708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9481380-9481587:-1:exon

Slc66a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc66a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 66 member 2 isoform X1
translation: MEAEGLDWLLVPLHQLVSWVAAGAMVFGGVVPYIPQYRDIRRTQNADGFSTHVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNIKRRSFAATDSKDEELRVPPRRPYLDFDPHHFWHWSSFADYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNYRHRSTEGMSLKMVLMWTSGDTFKTAYFLLNGAPLQFSVCGLLQVMVDLAILGQAYAFAHHPQKPAAHAVHPASAKAL
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9481380..9481587,9488492..9488708,9499920..9499973,9508732..9508865,9515255..9515457))
location: region:9481380-9515457:-1
so has part: feature:9515255-9515457:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9499920-9499973:-1:exon
so has part: feature:9488492-9488708:-1:exon
so has part: feature:9481380-9481587:-1:exon

XP_034374494.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9515255-9515457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9508732-9508865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9499920-9499973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9488492-9488708:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9481380-9481587:-1:exon

Slc66a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc66a2
product: solute carrier family 66 member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518606.1
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9499906..9499973,9508732..9508865,9515255..9515591,9516936..9517159))
location: region:9499906-9517159:-1
so has part: feature:9516936-9517159:-1:exon
so has part: feature:9515255-9515591:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9499906-9499973:-1:exon

position:9499906:-1
position: 9499906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9516936-9517159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9515255-9515591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9508732-9508865:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9499906-9499973:-1:exon

Slc66a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc66a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 66 member 2 isoform X3
translation: MEAEGLDWLLVPLHQLVSWVAAGAMVFGGVVPYIPQYRDIRRTQNADGFSTHVCLVLLVANILRILFWFGRHFESPLLWQSVVMILTMLLMLKLCTEVRVANELNIKRRSFAATDSKDEELRVPPRRPYLGMYY
SIO_010081: Slc66a2
subclass of: SO_0000673
so part of: Slc66a2
location: complement(join(9499906..9499973,9508732..9508865,9515255..9515457))
location: region:9499906-9515457:-1
so has part: feature:9515255-9515457:-1:exon
so has part: feature:9508732-9508865:-1:exon
so has part: feature:9499906-9499973:-1:exon

XP_034374497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9515255-9515457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9508732-9508865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9499906-9499973:-1:exon

Hsbp1l1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Hsbp1l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9532641..9538521
location: region:9532641-9538521:1
so has part: feature:9532641-9538521:1:exon
subclass of: SO_0000010

117719987
type: Gene
SIO_000068: ncbigene

position:9532641:1
position: 9532641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9538521:1
position: 9538521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9532641-9538521:1:exon

Hsbp1l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Hsbp1l1
product: heat shock factor binding protein 1 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034518455.1
SIO_010081: Hsbp1l1
subclass of: SO_0000673
so part of: Hsbp1l1
location: join(9532641..9532800,9534004..9534070,9535874..9535968,9538435..9538521)
location: region:9532641-9538521:1
so has part: feature:9532641-9532800:1:exon
so has part: feature:9534004-9534070:1:exon
so has part: feature:9535874-9535968:1:exon
so has part: feature:9538435-9538521:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9532641-9532800:1:exon

position:9532800:1
position: 9532800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9534004-9534070:1:exon

position:9534004:1
position: 9534004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9534070:1
position: 9534070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9535874-9535968:1:exon

position:9535874:1
position: 9535874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9535968:1
position: 9535968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9538435-9538521:1:exon

position:9538435:1
position: 9538435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Hsbp1l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Hsbp1l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock factor-binding protein 1-like protein 1
translation: MDARTPEVPCGDLLQNAAENLLQEVEEHFQALTATLNLRVEEMGSRIEDLQKNVDDLMAQAGIENSIKEPTT
SIO_010081: Hsbp1l1
subclass of: SO_0000673
so part of: Hsbp1l1
location: join(9532750..9532800,9534004..9534070,9535874..9535968,9538435..9538440)
location: region:9532750-9538440:1
so has part: feature:9532750-9532800:1:exon
so has part: feature:9534004-9534070:1:exon
so has part: feature:9535874-9535968:1:exon
so has part: feature:9538435-9538440:1:exon

XP_034374346.1
type: Protein
SIO_000068: ncbiprotein

position:9532750:1
position: 9532750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9538440:1
position: 9538440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9532750-9532800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9534004-9534070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9535874-9535968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9538435-9538440:1:exon

Txnl4a
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Txnl4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9547034..9567286)
location: region:9547034-9567286:-1
so has part: feature:9547034-9567286:-1:exon
subclass of: SO_0000010

117719901
type: Gene
SIO_000068: ncbigene

position:9547034:-1
position: 9547034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9567286:-1
position: 9567286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9547034-9567286:-1:exon

Txnl4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Txnl4a
product: thioredoxin like 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 1 long SRA read, 28 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518315.1
SIO_010081: Txnl4a
subclass of: SO_0000673
so part of: Txnl4a
location: complement(join(9547034..9547388,9554754..9554857,9566735..9566924,9567183..9567286))
location: region:9547034-9567286:-1
so has part: feature:9567183-9567286:-1:exon
so has part: feature:9566735-9566924:-1:exon
so has part: feature:9554754-9554857:-1:exon
so has part: feature:9547034-9547388:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9567183-9567286:-1:exon

position:9567183:-1
position: 9567183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9566735-9566924:-1:exon

position:9566735:-1
position: 9566735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9566924:-1
position: 9566924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9554754-9554857:-1:exon

position:9554754:-1
position: 9554754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9554857:-1
position: 9554857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9547034-9547388:-1:exon

position:9547388:-1
position: 9547388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Txnl4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Txnl4a
product: thioredoxin like 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518316.1
SIO_010081: Txnl4a
subclass of: SO_0000673
so part of: Txnl4a
location: complement(join(9547034..9547388,9554754..9554857,9563907..9563963))
location: region:9547034-9563963:-1
so has part: feature:9563907-9563963:-1:exon
so has part: feature:9554754-9554857:-1:exon
so has part: feature:9547034-9547388:-1:exon

position:9563963:-1
position: 9563963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9563907-9563963:-1:exon

position:9563907:-1
position: 9563907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9554754-9554857:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9547034-9547388:-1:exon

Txnl4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Txnl4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X1
translation: MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: Txnl4a
subclass of: SO_0000673
so part of: Txnl4a
location: complement(join(9547217..9547388,9554754..9554857,9566735..9566887))
location: region:9547217-9566887:-1
so has part: feature:9566735-9566887:-1:exon
so has part: feature:9554754-9554857:-1:exon
so has part: feature:9547217-9547388:-1:exon

XP_034374206.1
type: Protein
SIO_000068: ncbiprotein

position:9547217:-1
position: 9547217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9566887:-1
position: 9566887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9566735-9566887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9554754-9554857:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9547217-9547388:-1:exon

Txnl4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Txnl4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X2
translation: MYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRGARKGRGLVVSPKDYSTKYRY
SIO_010081: Txnl4a
subclass of: SO_0000673
so part of: Txnl4a
location: complement(join(9547217..9547388,9554754..9554797))
location: region:9547217-9554797:-1
so has part: feature:9554754-9554797:-1:exon
so has part: feature:9547217-9547388:-1:exon

XP_034374207.1
type: Protein
SIO_000068: ncbiprotein

position:9554797:-1
position: 9554797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9554754-9554797:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9547217-9547388:-1:exon

LOC117719900
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9560955..9567286)
location: region:9560955-9567286:-1
so has part: feature:9560955-9567286:-1:exon
subclass of: SO_0000010

117719900
type: Gene
SIO_000068: ncbigene

position:9560955:-1
position: 9560955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9560955-9567286:-1:exon

LOC117719900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117719900
product: N-alpha-acetyltransferase 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 4 long SRA reads, 21 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518314.1
SIO_010081: LOC117719900
subclass of: SO_0000673
so part of: LOC117719900
location: complement(join(9560955..9562368,9563907..9563975,9566735..9566924,9567183..9567286))
location: region:9560955-9567286:-1
so has part: feature:9567183-9567286:-1:exon
so has part: feature:9566735-9566924:-1:exon
so has part: feature:9563907-9563975:-1:exon
so has part: feature:9560955-9562368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9567183-9567286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9566735-9566924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9563907-9563975:-1:exon

position:9563975:-1
position: 9563975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9560955-9562368:-1:exon

position:9562368:-1
position: 9562368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Txnl4a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Txnl4a
product: thioredoxin like 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518317.1
SIO_010081: Txnl4a
subclass of: SO_0000673
so part of: Txnl4a
location: complement(join(9560955..9562368,9563907..9563975,9566735..9566918))
location: region:9560955-9566918:-1
so has part: feature:9566735-9566918:-1:exon
so has part: feature:9563907-9563975:-1:exon
so has part: feature:9560955-9562368:-1:exon

position:9566918:-1
position: 9566918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9566735-9566918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9563907-9563975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9560955-9562368:-1:exon

LOC117719900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117719900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-alpha-acetyltransferase 11-like
translation: MNIRRARPDDLMNMQHCNLLCLPENYQMKYYFYHGLSWPQLSYIAEDEDGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFSAKYVSLHVRKSNRAALHLYSNTLNFQVSEVEPKYYADGEDAYAMKRDLSQMADELRRQLVLKKGRYVVLGSKENQGGTLPGSEEAGQQENLAGGDSGSDSKDSTDVQDSLQALGSTS
SIO_010081: LOC117719900
subclass of: SO_0000673
so part of: LOC117719900
location: complement(9561626..9562288)
location: region:9561626-9562288:-1
so has part: feature:9561626-9562288:-1:exon

XP_034374205.1
type: Protein
SIO_000068: ncbiprotein

position:9561626:-1
position: 9561626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9562288:-1
position: 9562288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9561626-9562288:-1:exon

Txnl4a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Txnl4a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin-like protein 4A isoform X3
translation: MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKKWKIVGDLPHLV
SIO_010081: Txnl4a
subclass of: SO_0000673
so part of: Txnl4a
location: complement(join(9563937..9563975,9566735..9566887))
location: region:9563937-9566887:-1
so has part: feature:9566735-9566887:-1:exon
so has part: feature:9563937-9563975:-1:exon

XP_034374208.1
type: Protein
SIO_000068: ncbiprotein

position:9563937:-1
position: 9563937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9566735-9566887:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9563937-9563975:-1:exon

Rbfa
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Rbfa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9574551..9583990
location: region:9574551-9583990:1
so has part: feature:9574551-9583990:1:exon
subclass of: SO_0000010

117720185
type: Gene
SIO_000068: ncbigene

position:9574551:1
position: 9574551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9583990:1
position: 9583990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9574551-9583990:1:exon

Rbfa
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rbfa
product: ribosome binding factor A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518660.1
SIO_010081: Rbfa
subclass of: SO_0000673
so part of: Rbfa
location: join(9574551..9574838,9577079..9577298,9577811..9577923,9580649..9580733,9582836..9582903,9583240..9583990)
location: region:9574551-9583990:1
so has part: feature:9574551-9574838:1:exon
so has part: feature:9577079-9577298:1:exon
so has part: feature:9577811-9577923:1:exon
so has part: feature:9580649-9580733:1:exon
so has part: feature:9582836-9582903:1:exon
so has part: feature:9583240-9583990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9574551-9574838:1:exon

position:9574838:1
position: 9574838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9577079-9577298:1:exon

position:9577079:1
position: 9577079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9577298:1
position: 9577298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9577811-9577923:1:exon

position:9577811:1
position: 9577811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9577923:1
position: 9577923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9580649-9580733:1:exon

position:9580649:1
position: 9580649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9580733:1
position: 9580733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9582836-9582903:1:exon

position:9582836:1
position: 9582836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9582903:1
position: 9582903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9583240-9583990:1:exon

position:9583240:1
position: 9583240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rbfa
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rbfa
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ribosome-binding factor A, mitochondrial
translation: MWAGVAGLRGSCAGLQALRGSHRAALLPGRAPALHTSAASCGSKNLLKKFASKTRKKFWYESPSLGSHLTPKTSKYEFLTKNTLKKTRKEDSVRLRVLNGILYKSLTELLCTPEVSQEVYDLNVELSKVSVTSDFSACRVYWKTGVSAEQNRHTEAVLQRSAAYMRHLLISQQTLRNVPPIVFVQDKRDIVLAEVDRLLAVAGFGPPDERDDLDGLRNTDAQAPRDPTETTSQPHLCGIDHEALTKQVMEYKRRKERGLQCMTLVPPSEREQAPGPTRLYRKRKKARSRQHQDTSPRSFLLGEEDEDEDSSTEWECHAHEAEDEWEAEHRGDSGGDSVQQGLCGKREQR
SIO_010081: Rbfa
subclass of: SO_0000673
so part of: Rbfa
location: join(9574675..9574838,9577079..9577298,9577811..9577923,9580649..9580733,9582836..9582903,9583240..9583639)
location: region:9574675-9583639:1
so has part: feature:9574675-9574838:1:exon
so has part: feature:9577079-9577298:1:exon
so has part: feature:9577811-9577923:1:exon
so has part: feature:9580649-9580733:1:exon
so has part: feature:9582836-9582903:1:exon
so has part: feature:9583240-9583639:1:exon

XP_034374551.1
type: Protein
SIO_000068: ncbiprotein

position:9574675:1
position: 9574675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9583639:1
position: 9583639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9574675-9574838:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9577079-9577298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9577811-9577923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9580649-9580733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9582836-9582903:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9583240-9583639:1:exon

Adnp2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Adnp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9637442..9664517
location: region:9637442-9664517:1
so has part: feature:9637442-9664517:1:exon
subclass of: SO_0000010

117719861
type: Gene
SIO_000068: ncbigene

position:9637442:1
position: 9637442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9664517:1
position: 9664517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9637442-9664517:1:exon

Adnp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Adnp2
product: ADNP homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034518243.1
SIO_010081: Adnp2
subclass of: SO_0000673
so part of: Adnp2
location: join(9637442..9638125,9646231..9646318,9647320..9647440,9653719..9653808,9660689..9664517)
location: region:9637442-9664517:1
so has part: feature:9637442-9638125:1:exon
so has part: feature:9646231-9646318:1:exon
so has part: feature:9647320-9647440:1:exon
so has part: feature:9653719-9653808:1:exon
so has part: feature:9660689-9664517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9637442-9638125:1:exon

position:9638125:1
position: 9638125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9646231-9646318:1:exon

position:9646231:1
position: 9646231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9646318:1
position: 9646318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9647320-9647440:1:exon

position:9647320:1
position: 9647320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9647440:1
position: 9647440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9653719-9653808:1:exon

position:9653719:1
position: 9653719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9653808:1
position: 9653808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9660689-9664517:1:exon

position:9660689:1
position: 9660689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Adnp2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Adnp2
product: ADNP homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034518242.1
SIO_010081: Adnp2
subclass of: SO_0000673
so part of: Adnp2
location: join(9637442..9638125,9647320..9647440,9653719..9653808,9660689..9664517)
location: region:9637442-9664517:1
so has part: feature:9637442-9638125:1:exon
so has part: feature:9647320-9647440:1:exon
so has part: feature:9653719-9653808:1:exon
so has part: feature:9660689-9664517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9637442-9638125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9647320-9647440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9653719-9653808:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9660689-9664517:1:exon

Adnp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Adnp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activity-dependent neuroprotector homeobox protein 2 isoform X1
translation: MTSPPTQTLSRACPEVLRALDPGGPGEGAAAGPTPSRDWRPAGSRGQEGPVERAQGVPRHTLHPLAGLVGMQIRQRHFRRQLSAIFSFWRAGGGTGAGRGSRRVGGGRGGIATAAGRGAPRAPRKIGKMFQIPVQNLDNIRKVRKRVKGILVDIGLDSCKELLKDLKGFEPGEKYFYNTSWGDVSLWEPSGKKARYRTKPYCCSLCRYSTKVLTSLKNHVHRYHEDEADQELIIPCPNCPFASQPRVVGKHFRMFHAPARKVQSYTVNILGEAKTSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFNYLINSYFGLRTEETGEQPKASDPVSVDKILSFDKYYCKKCSAIASSQDALMYHILTSDAHRDLENKLRSVISEHIKRTGFLKQMHIAPKPVTHLALPANSSAPSIAAPPPCFQLALPQNSQSPGTVQSVTVAPGTSGSLTHSPPTTAQSHVALVSSSLPVCQSSLTLQQSAPPPVFLSHSVALNQPVSTSVLPLTQPVGPVNKSVGTSILPVNQAMCSVNQAVRPGVLPLTKPIGPMNRPMGPMNRPVGAGVLPVGPSVNPGVLQAASPGVISVGRAVPSGVIPAGQVTPAGVIPGHTATSGVLPTGQVVQSSVLPVGQTAPSRVLPPGQTVPLRVLPAGQVVPPGLLSPNQTVSSGVVPVNQGMNSGVLQLSQPVTPGVLPVGPPVRPGVLQLSPSVSTSILPVSQPVRAGTSQNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPSGGGLAAVGSPPQVPVQFLPSSSGTQMGSSLPSLPSPQVLVSPAPSVFVQATPPVGETNQALKQAKQWKTCPVCNELFPSNVYQVHMEVAHKQSEAQLCQVCNELFPANVYQVHMEVAHKQSESKSSEKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSQEELMHHLLMHGLGCLFCPCTFHDVRGLVEHSRTKHLGKKRLSMDYSNRGFQLDLDADGNLLFPHLDFITILPREKLGEREVYLAILAGIHSKSLVPVYVKVRPQPEVAPKLPNKQKLTCPFCFGTFMTADVYELHLKERHHVMPTVHTMLRSPAFKCIHCCGVYTGNMTLGAIAVHLLRCRSAPKDSSSDLQVQPGFIESSELLMVNGEVIPESTFPVKRKLPEGHLGMEDQRDDGEEPQLTLDIDASPGSEKGLSAVPLKRQKNESRTEGSGASDDSLQVLALDPRKYDGRSYEEKKQFLRDYFHKRPYPSRKEVELLSSLLWVWKIDVASFFGKRRYICMKAIKTHRPSVLLGFDMSELKNVKHRLNFECESQGL
SIO_010081: Adnp2
subclass of: SO_0000673
so part of: Adnp2
location: join(9637755..9638125,9647320..9647440,9653719..9653808,9660689..9664009)
location: region:9637755-9664009:1
so has part: feature:9637755-9638125:1:exon
so has part: feature:9647320-9647440:1:exon
so has part: feature:9653719-9653808:1:exon
so has part: feature:9660689-9664009:1:exon

XP_034374133.1
type: Protein
SIO_000068: ncbiprotein

position:9637755:1
position: 9637755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9664009:1
position: 9664009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9637755-9638125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9647320-9647440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9653719-9653808:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9660689-9664009:1:exon

Adnp2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Adnp2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activity-dependent neuroprotector homeobox protein 2 isoform X2
translation: MFQIPVQNLDNIRKVRKRVKGILVDIGLDSCKELLKDLKGFEPGEKYFYNTSWGDVSLWEPSGKKARYRTKPYCCSLCRYSTKVLTSLKNHVHRYHEDEADQELIIPCPNCPFASQPRVVGKHFRMFHAPARKVQSYTVNILGEAKTSRSDVISFTCLKCNFSNTLYYSMKKHVLVAHFNYLINSYFGLRTEETGEQPKASDPVSVDKILSFDKYYCKKCSAIASSQDALMYHILTSDAHRDLENKLRSVISEHIKRTGFLKQMHIAPKPVTHLALPANSSAPSIAAPPPCFQLALPQNSQSPGTVQSVTVAPGTSGSLTHSPPTTAQSHVALVSSSLPVCQSSLTLQQSAPPPVFLSHSVALNQPVSTSVLPLTQPVGPVNKSVGTSILPVNQAMCSVNQAVRPGVLPLTKPIGPMNRPMGPMNRPVGAGVLPVGPSVNPGVLQAASPGVISVGRAVPSGVIPAGQVTPAGVIPGHTATSGVLPTGQVVQSSVLPVGQTAPSRVLPPGQTVPLRVLPAGQVVPPGLLSPNQTVSSGVVPVNQGMNSGVLQLSQPVTPGVLPVGPPVRPGVLQLSPSVSTSILPVSQPVRAGTSQNTTFLTSGSILRQLIPTGKQVNGIPTYTLAPVSVTLPVPSGGGLAAVGSPPQVPVQFLPSSSGTQMGSSLPSLPSPQVLVSPAPSVFVQATPPVGETNQALKQAKQWKTCPVCNELFPSNVYQVHMEVAHKQSEAQLCQVCNELFPANVYQVHMEVAHKQSESKSSEKLEPEKLAACAPFLKWMREKTVRCLSCKCLVSQEELMHHLLMHGLGCLFCPCTFHDVRGLVEHSRTKHLGKKRLSMDYSNRGFQLDLDADGNLLFPHLDFITILPREKLGEREVYLAILAGIHSKSLVPVYVKVRPQPEVAPKLPNKQKLTCPFCFGTFMTADVYELHLKERHHVMPTVHTMLRSPAFKCIHCCGVYTGNMTLGAIAVHLLRCRSAPKDSSSDLQVQPGFIESSELLMVNGEVIPESTFPVKRKLPEGHLGMEDQRDDGEEPQLTLDIDASPGSEKGLSAVPLKRQKNESRTEGSGASDDSLQVLALDPRKYDGRSYEEKKQFLRDYFHKRPYPSRKEVELLSSLLWVWKIDVASFFGKRRYICMKAIKTHRPSVLLGFDMSELKNVKHRLNFECESQGL
SIO_010081: Adnp2
subclass of: SO_0000673
so part of: Adnp2
location: join(9647333..9647440,9653719..9653808,9660689..9664009)
location: region:9647333-9664009:1
so has part: feature:9647333-9647440:1:exon
so has part: feature:9653719-9653808:1:exon
so has part: feature:9660689-9664009:1:exon

XP_034374134.1
type: Protein
SIO_000068: ncbiprotein

position:9647333:1
position: 9647333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9647333-9647440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9653719-9653808:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9660689-9664009:1:exon

Pard6g
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Pard6g
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9673487..9742426)
location: region:9673487-9742426:-1
so has part: feature:9673487-9742426:-1:exon
subclass of: SO_0000010

117720011
type: Gene
SIO_000068: ncbigene

position:9673487:-1
position: 9673487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9742426:-1
position: 9742426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9673487-9742426:-1:exon

Pard6g
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: Pard6g
product: par-6 family cell polarity regulator gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004608253.1
SIO_010081: Pard6g
so part of: Pard6g
location: complement(join(9673487..9674158,9674694..9676249,9711597..9711819,9742219..9742426))
location: region:9673487-9742426:-1
so has part: feature:9742219-9742426:-1:exon
so has part: feature:9711597-9711819:-1:exon
so has part: feature:9674694-9676249:-1:exon
so has part: feature:9673487-9674158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9742219-9742426:-1:exon

position:9742219:-1
position: 9742219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9711597-9711819:-1:exon

position:9711597:-1
position: 9711597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9711819:-1
position: 9711819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9674694-9676249:-1:exon

position:9674694:-1
position: 9674694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9676249:-1
position: 9676249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9673487-9674158:-1:exon

position:9674158:-1
position: 9674158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pard6g
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pard6g
product: par-6 family cell polarity regulator gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518487.1
SIO_010081: Pard6g
subclass of: SO_0000673
so part of: Pard6g
location: complement(join(9673487..9676249,9711597..9711819,9742219..9742426))
location: region:9673487-9742426:-1
so has part: feature:9742219-9742426:-1:exon
so has part: feature:9711597-9711819:-1:exon
so has part: feature:9673487-9676249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9742219-9742426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9711597-9711819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9673487-9676249:-1:exon

Pard6g
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pard6g
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: partitioning defective 6 homolog gamma
translation: MNRSFHKSQTLRFYDCSAVEVKSKFGAEFRRFSLDRHKPGKFEDFYQLVVHTHHISNTDVTIGYADVHGDLLPINNDDNFCKAVSSANPLLRVFIQKREEADHYSFGAGTLSRKKKVLVTLRDEGLRRRTHLNISMPHDFRPVSSIIDVDILPETHRRVRLYRHGCEKPLGFYIRDGTSVRVTPHGLEKVPGIFISRMVPGGLAESTGLLAVNDEVLEVNGIEVAGKTLDQVTDMMIANSHNLIITVKPANQRNNVVRSSRTSGSSVQSTDSTTSHHSLPGAHALPNSEEMESDEEADIVIEGALEPQHIPKTQAVPPGSLSRANGTSLAHRLHRGDMSLHSSGRESNGSIHRFLSSLKPDPRHSLVLPQGGVEEHGPAITL
SIO_010081: Pard6g
subclass of: SO_0000673
so part of: Pard6g
location: complement(join(9675396..9676249,9711597..9711819,9742219..9742290))
location: region:9675396-9742290:-1
so has part: feature:9742219-9742290:-1:exon
so has part: feature:9711597-9711819:-1:exon
so has part: feature:9675396-9676249:-1:exon

XP_034374378.1
type: Protein
SIO_000068: ncbiprotein

position:9675396:-1
position: 9675396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9742290:-1
position: 9742290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9742219-9742290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9711597-9711819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9675396-9676249:-1:exon

LOC117719813
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719813
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9762729..9763634)
location: region:9762729-9763634:-1
so has part: feature:9762729-9763634:-1:exon

117719813
type: Gene
SIO_000068: ncbigene

position:9762729:-1
position: 9762729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9763634:-1
position: 9763634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9762729-9763634:-1:exon

LOC117719813
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: LOC117719813
product: 40S ribosomal protein S2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 87 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_004608235.1
SIO_010081: LOC117719813
so part of: LOC117719813
location: complement(9762729..9763634)
location: region:9762729-9763634:-1
so has part: feature:9762729-9763634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9762729-9763634:-1:exon

LOC117720164
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9769656..9771269)
location: region:9769656-9771269:-1
so has part: feature:9769656-9771269:-1:exon
subclass of: SO_0000010

117720164
type: Gene
SIO_000068: ncbigene

position:9769656:-1
position: 9769656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9771269:-1
position: 9771269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9769656-9771269:-1:exon

LOC117720164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117720164
product: SNW domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518633.1
SIO_010081: LOC117720164
subclass of: SO_0000673
so part of: LOC117720164
location: complement(9769656..9771269)
location: region:9769656-9771269:-1
so has part: feature:9769656-9771269:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9769656-9771269:-1:exon

LOC117720164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117720164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNW domain-containing protein 1-like
translation: MVLTSSLPEPTQLPQDQLGAEEKARSERSLQTSLRSSRMEPPGYGYRKDWIPRSLEDFGDGGAFPEIHVAQYPLGMGRKNKTSNALAIQLDHEGKIKYDAIARQGQSRDKVLYSKYTDLIPKEVRNADDPELQRPDEETIKETTEKTRAALHTGLSRKLGAATPVPAAGKLASPQHILYTPSQQGGAFSSGAKQRLIRMVEMQKDPTEPPRFRIHKKLPRGPPSPPAPVMHSPTQKKTVKEQQEWKIPPCIPRWKNPKGYAIPLDKRAAADGGGLQPVHINAKFAKLAAALHIAEQKARAGLQMRAQLQAKMAQKEKEKHEENLREMAQKAREGRAGMKSHVEKEAGEARERDEIRQDRRKERQQDRNLSRTAPGKRSKPPRNENRDISEAIALGVPKPPPSNEVQYDIRLFNQSKGMDSGFAGGEDGVYSVYHQPWRSGKDVAQSIYRPGQSVDKDLDSGYLEARIQTNRFVPDKVFSGSDLTQRGREGPVHFEEDPFGLDKFLAEAKQYPAGSKRSSESSHPEEHEHEGKKLRKE
SIO_010081: LOC117720164
subclass of: SO_0000673
so part of: LOC117720164
location: complement(9769656..9771269)
location: region:9769656-9771269:-1
so has part: feature:9769656-9771269:-1:exon

XP_034374524.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9769656-9771269:-1:exon

LOC117720169
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9773931..9775544)
location: region:9773931-9775544:-1
so has part: feature:9773931-9775544:-1:exon
subclass of: SO_0000010

117720169
type: Gene
SIO_000068: ncbigene

position:9773931:-1
position: 9773931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9775544:-1
position: 9775544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9773931-9775544:-1:exon

LOC117720169
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117720169
product: SNW domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_034518639.1
SIO_010081: LOC117720169
subclass of: SO_0000673
so part of: LOC117720169
location: complement(9773931..9775544)
location: region:9773931-9775544:-1
so has part: feature:9773931-9775544:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9773931-9775544:-1:exon

LOC117720169
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117720169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNW domain-containing protein 1-like
translation: MVLTSSLPEPTQLPQDQLGAEEKARSERSLQTSLRSSRMEPPRYGYRKDWIPRSLEDFGDGGAFPEIHVAQYPLGMGRKNKTSNALAIQLDHEGKIKYDAIARQGQSRDKVLYSKYTDLIPKEVRNADDPELQRPDEETIKETTEKTRAALHTGLSRKLGAATPVPAAGKLASPQHILYTPSQQGGAFSSGAKQRLIRMVEMQKDPTEPLRFRIHKKLPRGPPSPPAPVMHSPTQKKTVKEQQEWKIPPCIPRWKNPKGYAIPLDKREATDGGGLQPVHINAKFAKLAAALDIAKQKARAGLQMRAQLQAKMAQKEKEKHEENLREMAQKAREGRAGMKSHVEKEAGEARERDEIRQDRRKERQQDRNLSRTAPGKRSKPPRNENRDISEAIALGVPKPPPSNEVQYDIRLFNQSKGMDSGFAGGEDGVYSVYHQPWRSGKDVAQSIYRPGQSVDKDLDSGYLEARIQTNRFVPDKVFSGSDLTQRGREGPVHFEEDPFGLDKFLAEAKQYTAGSKRSSESSHPEEHEHEGKKLRKE
SIO_010081: LOC117720169
subclass of: SO_0000673
so part of: LOC117720169
location: complement(9773931..9775544)
location: region:9773931-9775544:-1
so has part: feature:9773931-9775544:-1:exon

XP_034374530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9773931-9775544:-1:exon

LOC117720144
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9783411..9785024)
location: region:9783411-9785024:-1
so has part: feature:9783411-9785024:-1:exon
subclass of: SO_0000010

117720144
type: Gene
SIO_000068: ncbigene

position:9783411:-1
position: 9783411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9785024:-1
position: 9785024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9783411-9785024:-1:exon

LOC117720144
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117720144
product: SNW domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518610.1
SIO_010081: LOC117720144
subclass of: SO_0000673
so part of: LOC117720144
location: complement(9783411..9785024)
location: region:9783411-9785024:-1
so has part: feature:9783411-9785024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9783411-9785024:-1:exon

LOC117720144
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117720144
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNW domain-containing protein 1-like
translation: MVLTSSLPEPTQLPQDQLGAEEKARSERSLQTSLRSSRMEPPGYGYRKDWIPRSLEDFGDGGAFPEIHVTQYPLGMGRKNKTSNALAIQLDHEGKIKYDAIARQGQSRDKVLYSKYTDLVPKEVRNADDPELQRPDEETIKETTEKTRAALHTGLSRKLGAATPVPAAGKLASPQHILYTPSQQGGAFSSGAKQRLIRMVEMQKDPTEPLRFRIHKKLPRGPPSPPAPVMHSPTQKKTVKEQQEWKIPPCIPRWKNPKGYAIPLDKRAAADGGGLQPVHINAKFAKLAAALHIAEQKARAGLQMRAQLQAKMAQKEKEKHEEKLREMAQKAREGRAGMKSHVEKEAGEARERDEIRQDRRKERQQDRNLSRTAPGKRSKPPRNENRDISEAIALGVPKPPPSNEVQYDIRLFNQSKGMDSGFAGGEDGVYSVYHQPWRSGKDVAQSIYRPGQSVDKDLDSGYLAARIQTNRFVPDKVFSGSDLTQRGREGPVHFEEDPFGLDKFLAEAKQYTAGSKRSSESSHPEEHEHEGKKLRKE
SIO_010081: LOC117720144
subclass of: SO_0000673
so part of: LOC117720144
location: complement(9783411..9785024)
location: region:9783411-9785024:-1
so has part: feature:9783411-9785024:-1:exon

XP_034374501.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9783411-9785024:-1:exon

LOC117720066
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9789989..9790903)
location: region:9789989-9790903:-1
so has part: feature:9789989-9790903:-1:exon

117720066
type: Gene
SIO_000068: ncbigene

position:9789989:-1
position: 9789989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9790903:-1
position: 9790903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9789989-9790903:-1:exon

LOC117720066
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720066
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117720066
subclass of: SO_0000673
so part of: LOC117720066
location: complement(9789989..9790573)
location: region:9789989-9790573:-1
so has part: feature:9789989-9790573:-1:exon

position:9790573:-1
position: 9790573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9789989-9790573:-1:exon

LOC117720066
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720066
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117720066
subclass of: SO_0000673
so part of: LOC117720066
location: complement(9790835..9790903)
location: region:9790835-9790903:-1
so has part: feature:9790835-9790903:-1:exon

position:9790835:-1
position: 9790835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9790835-9790903:-1:exon

LOC117719554
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9791591..9791839)
location: region:9791591-9791839:-1
so has part: feature:9791591-9791839:-1:exon
subclass of: SO_0000010

117719554
type: Gene
SIO_000068: ncbigene

position:9791591:-1
position: 9791591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9791839:-1
position: 9791839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9791591-9791839:-1:exon

LOC117719554
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117719554
product: transcription elongation factor 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_034517711.1
SIO_010081: LOC117719554
subclass of: SO_0000673
so part of: LOC117719554
location: complement(9791591..9791839)
location: region:9791591-9791839:-1
so has part: feature:9791591-9791839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9791591-9791839:-1:exon

LOC117719554
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117719554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor 1 homolog
translation: MGRRKPKWKPTQKKMTGTLETQFTCPFCNHQKSCDVKMDRARKIAVISCIVCLDEFHTPITHLSEPVDVYNDWIDACEAANQ
SIO_010081: LOC117719554
subclass of: SO_0000673
so part of: LOC117719554
location: complement(9791591..9791839)
location: region:9791591-9791839:-1
so has part: feature:9791591-9791839:-1:exon

XP_034373602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9791591-9791839:-1:exon

LOC117720162
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9819630..9821243)
location: region:9819630-9821243:-1
so has part: feature:9819630-9821243:-1:exon
subclass of: SO_0000010

117720162
type: Gene
SIO_000068: ncbigene

position:9819630:-1
position: 9819630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9821243:-1
position: 9821243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9819630-9821243:-1:exon

LOC117720162
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117720162
product: SNW domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518628.1
SIO_010081: LOC117720162
subclass of: SO_0000673
so part of: LOC117720162
location: complement(9819630..9821243)
location: region:9819630-9821243:-1
so has part: feature:9819630-9821243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9819630-9821243:-1:exon

LOC117720162
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117720162
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SNW domain-containing protein 1-like
translation: MVLTSSLPEPTQLPQDQLGAEEKARSERSLQTSLRSSRMEPPGYGYRKDWIPRSLEDFGDGGAFPEIHVAQYPLGMGRKNKTSNALAIQLDHEGKIKYDAIARQGQSRDKVLYSKYTDLIPKEVRNADDPELQRPDEETIKETTEKTRAALHTVLSRKLGAATPVPAAGKLASPQHILYTPSQQGGAFSSGAKQRLIRMVEMQKDPTEPPRFRIHKKLPRGPPSPPAPVMHSPTQKKTVKEQQEWKIPPCIPRWKNPKGYAIPLDKRAAADGGGLQPVHINAKFAKLAAALHIAEQKARAGLQMRAQLQAKMAQKEKEKHEENLREMAQKAREGRAGMKSHVEKEAGEARERDEIRQDRRKERQQDRNLSRTAPGKRSKPPRNENRDISEAIALGVPKPPPSNEVQYDIRLFNQSKGMDSGFAGGEDGVYSVYHQPWRSGKDVAQSIYRPGQSVDKDLDSGYLEARIQTNRFVPDKVFSGSDLTQRGREGPVHFEEDPFGLDKFLAEAKQYPAGSKRSSESSHPEEHEHEGKKLRKE
SIO_010081: LOC117720162
subclass of: SO_0000673
so part of: LOC117720162
location: complement(9819630..9821243)
location: region:9819630-9821243:-1
so has part: feature:9819630-9821243:-1:exon

XP_034374519.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9819630-9821243:-1:exon

LOC117720068
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720068
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9826187..9827103)
location: region:9826187-9827103:-1
so has part: feature:9826187-9827103:-1:exon

117720068
type: Gene
SIO_000068: ncbigene

position:9826187:-1
position: 9826187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9827103:-1
position: 9827103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9826187-9827103:-1:exon

LOC117720068
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720068
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117720068
subclass of: SO_0000673
so part of: LOC117720068
location: complement(9826187..9826771)
location: region:9826187-9826771:-1
so has part: feature:9826187-9826771:-1:exon

position:9826771:-1
position: 9826771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9826187-9826771:-1:exon

LOC117720068
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720068
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117720068
subclass of: SO_0000673
so part of: LOC117720068
location: complement(9827035..9827103)
location: region:9827035-9827103:-1
so has part: feature:9827035-9827103:-1:exon

position:9827035:-1
position: 9827035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9827035-9827103:-1:exon

LOC117719555
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9827800..9828051)
location: region:9827800-9828051:-1
so has part: feature:9827800-9828051:-1:exon
subclass of: SO_0000010

117719555
type: Gene
SIO_000068: ncbigene

position:9827800:-1
position: 9827800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9828051:-1
position: 9828051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9827800-9828051:-1:exon

LOC117719555
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117719555
product: transcription elongation factor 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_034517712.1
SIO_010081: LOC117719555
subclass of: SO_0000673
so part of: LOC117719555
location: complement(9827800..9828051)
location: region:9827800-9828051:-1
so has part: feature:9827800-9828051:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9827800-9828051:-1:exon

LOC117719555
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117719555
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor 1 homolog
translation: MGRRKPKWKPTQKKKMTGTLETQFTCPFCNHQKSCDVKMDRARKIAVISCIVCLDEFHTPITHLSEPVDVYNDWIDACEAANQ
SIO_010081: LOC117719555
subclass of: SO_0000673
so part of: LOC117719555
location: complement(9827800..9828051)
location: region:9827800-9828051:-1
so has part: feature:9827800-9828051:-1:exon

XP_034373603.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9827800-9828051:-1:exon

LOC117719556
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9868461..9868712
location: region:9868461-9868712:1
so has part: feature:9868461-9868712:1:exon
subclass of: SO_0000010

117719556
type: Gene
SIO_000068: ncbigene

position:9868461:1
position: 9868461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9868712:1
position: 9868712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9868461-9868712:1:exon

LOC117719556
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117719556
product: transcription elongation factor 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
transcript id: XM_034517713.1
SIO_010081: LOC117719556
subclass of: SO_0000673
so part of: LOC117719556
location: 9868461..9868712
location: region:9868461-9868712:1
so has part: feature:9868461-9868712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9868461-9868712:1:exon

LOC117719556
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117719556
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor 1 homolog
translation: MGRRKPKWKPTQKKKMTGTLETQFTCPFCNHQKSCDVKMDRARKIAVISCIACLDEFHTPITHLSEPVDVYNDWIDACEAANQ
SIO_010081: LOC117719556
subclass of: SO_0000673
so part of: LOC117719556
location: 9868461..9868712
location: region:9868461-9868712:1
so has part: feature:9868461-9868712:1:exon

XP_034373604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9868461-9868712:1:exon

LOC117719551
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9872229..9872469
location: region:9872229-9872469:1
so has part: feature:9872229-9872469:1:exon

117719551
type: Gene
SIO_000068: ncbigene

position:9872229:1
position: 9872229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9872469:1
position: 9872469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9872229-9872469:1:exon

LOC117719551
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117719551
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117719551
subclass of: SO_0000673
so part of: LOC117719551
location: 9872229..9872469
location: region:9872229-9872469:1
so has part: feature:9872229-9872469:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9872229-9872469:1:exon

LOC117720069
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9960527..9961534
location: region:9960527-9961534:1
so has part: feature:9960527-9961534:1:exon

117720069
type: Gene
SIO_000068: ncbigene

position:9960527:1
position: 9960527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9961534:1
position: 9961534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9960527-9961534:1:exon

LOC117720069
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720069
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117720069
subclass of: SO_0000673
so part of: LOC117720069
location: 9960527..9961534
location: region:9960527-9961534:1
so has part: feature:9960527-9961534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9960527-9961534:1:exon

LOC117720251
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720251
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 10249589..10249701
location: region:10249589-10249701:1
so has part: feature:10249589-10249701:1:exon

117720251
type: Gene
SIO_000068: ncbigene

position:10249589:1
position: 10249589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10249701:1
position: 10249701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10249589-10249701:1:exon

LOC117720251
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720251
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117720251
subclass of: SO_0000673
so part of: LOC117720251
location: 10249589..10249701
location: region:10249589-10249701:1
so has part: feature:10249589-10249701:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10249589-10249701:1:exon

LOC117720070
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10503074..10504727
location: region:10503074-10504727:1
so has part: feature:10503074-10504727:1:exon

117720070
type: Gene
SIO_000068: ncbigene

position:10503074:1
position: 10503074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10504727:1
position: 10504727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10503074-10504727:1:exon

LOC117720070
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720070
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC117720070
subclass of: SO_0000673
so part of: LOC117720070
location: 10503074..10503094
location: region:10503074-10503094:1
so has part: feature:10503074-10503094:1:exon

position:10503094:1
position: 10503094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10503074-10503094:1:exon

LOC117720070
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720070
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC117720070
subclass of: SO_0000673
so part of: LOC117720070
location: 10504139..10504727
location: region:10504139-10504727:1
so has part: feature:10504139-10504727:1:exon

position:10504139:1
position: 10504139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10504139-10504727:1:exon

LOC117720072
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10703054..10726773
location: region:10703054-10726773:1
so has part: feature:10703054-10726773:1:exon
subclass of: SO_0000010

117720072
type: Gene
SIO_000068: ncbigene

position:10703054:1
position: 10703054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10726773:1
position: 10726773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10703054-10726773:1:exon

LOC117720072
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117720072
product: SET-binding protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518536.1
SIO_010081: LOC117720072
subclass of: SO_0000673
so part of: LOC117720072
location: join(10703054..10703109,10724083..10724709,10726675..10726773)
location: region:10703054-10726773:1
so has part: feature:10703054-10703109:1:exon
so has part: feature:10724083-10724709:1:exon
so has part: feature:10726675-10726773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10703054-10703109:1:exon

position:10703109:1
position: 10703109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10724083-10724709:1:exon

position:10724083:1
position: 10724083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10724709:1
position: 10724709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10726675-10726773:1:exon

position:10726675:1
position: 10726675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117720072
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117720072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SET-binding protein-like
translation: MESREMLNNSRQRGSESEFLTGSSSRSPAAPGCSGEPLKGISVGGERMEPEEEDELGSGRDVDCNSNADSEKWVAGDGLEEQEFSIKEANFTEGSLKLKIQTTKRAKKPPKNLENYICPPEIKITIKQSGDQKVSRTGKNSKATKEEERSHSKKKLEGVEKKGAGFQHEEAFYDVTVMGELIKCFSS
SIO_010081: LOC117720072
subclass of: SO_0000673
so part of: LOC117720072
location: join(10724245..10724709,10726675..10726773)
location: region:10724245-10726773:1
so has part: feature:10724245-10724709:1:exon
so has part: feature:10726675-10726773:1:exon

XP_034374427.1
type: Protein
SIO_000068: ncbiprotein

position:10724245:1
position: 10724245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10724245-10724709:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10726675-10726773:1:exon

Setbp1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Setbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10884068..11051535
location: region:10884068-11051535:1
so has part: feature:10884068-11051535:1:exon
subclass of: SO_0000010

117720073
type: Gene
SIO_000068: ncbigene

position:10884068:1
position: 10884068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11051535:1
position: 11051535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10884068-11051535:1:exon

Setbp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Setbp1
product: SET binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518537.1
SIO_010081: Setbp1
subclass of: SO_0000673
so part of: Setbp1
location: join(10884068..10884097,10888380..10888433,10943881..10947328,11018828..11018998,11046317..11051535)
location: region:10884068-11051535:1
so has part: feature:10884068-10884097:1:exon
so has part: feature:10888380-10888433:1:exon
so has part: feature:10943881-10947328:1:exon
so has part: feature:11018828-11018998:1:exon
so has part: feature:11046317-11051535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10884068-10884097:1:exon

position:10884097:1
position: 10884097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10888380-10888433:1:exon

position:10888380:1
position: 10888380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10888433:1
position: 10888433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10943881-10947328:1:exon

position:10943881:1
position: 10943881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10947328:1
position: 10947328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11018828-11018998:1:exon

position:11018828:1
position: 11018828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11018998:1
position: 11018998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11046317-11051535:1:exon

position:11046317:1
position: 11046317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Setbp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Setbp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SET-binding protein
translation: MLTMVVIVVMLLSASDPAASDLKGFQTQAYERPQKHSTLQYDPGLSQGFTSDTLKPKHQQKSSSQSHMDWSSNSDSGPATQNCFISPESGRDTASTSKIPALEPVASFAKAQSKKGSTGGTWSQLSSSSKDLLLGSVVPSPSSHSSPATPSNSAECNGLQPLGDQDGGSTKELPEPPALSSKKKSSKKDTIIQTIPNSDLDWVKSAQKAFETTEGKREAYSADNAKEASPTRQSISSVSNPENDSSHVRITIPIKTPSLDPTNHKRKKRQSIKAVVEKIIPEKALTSGITMSSEVVNRILSNSEGSKKDPRVPKLGKMIENEPHSVGLETGGITEKTVPGGVSKQRKLPIVMTSPTRSEHAPSGKLPEIQHPKFAAKRRCSKAKPPAMLREAVLATAEKLMVEPPSAYPITPSSPLYTNTDSLTVITPVKKKRGRPKKQPLLTVETIHEGTSTSPVSPISREFPGTKKRKRRRNLAKLAQLVPGEDKPMSEMKFHKKVGKLGVLDKKTIKTINKMKTLKRKNILNQILSCSSSVALKAKAPPETSPGTPSIESKLGKQINVSKRGTIYIGKKRGRKPRTELPPPSEEPKTAIKHPRPVSSQPDVPPVPSSFQSPVASSPAAVHPLSTQLGGSNGNLSPASTETNFSELKTMPNLQPISALPTKTQKGIHSGTWKLSPPRLMANSPSHLCEIGSLKEITLSPVSESHSEETIPSDSGIGTDNNSTSDQAEKSSESRRRYSFDFCSLDNPEAIPSDTSTKNRHGHRQKHLIVDTFLAHESLKKPKHKRKRKSLQNRDDLQFLAELEELITKFQVFRISHRGYTFYHENPYPSIFRINFDHYYPVPYIQYDPLLYLRRTSDLKSKKKRGRPAKTNDTMTKVPFLQGFSYPIPSGSYYAPYGMPYTSLPMMNLGYYGQYPAPLYLSHTLGAASPFMRPTVPPPQFHTSSHVKMSGATKHKAKHGVHLQGTVGMGLGDIQPSLNPPKVGGATLSSNRLHKRKHKHKHKHKEDRILGTHDNLSGLFAGKATGFSSHLLSERLSSSDKELPLVSEKSKHKERQKHQHGEASHKVSKSNFEVDTLSTLSLSDAQHWTQAKDKGDLSGEPVESCAKRYSGGGGDSTRSESLDVFSEMNPSGDKWDSDVVGSKRRSFEGFGTYREKDIQAFKVNRKERGSYESSMSPGMPSPHLKVDQTAAHSKSEGSGSTMMARKKPTAVDSVAIPSAPVLSLLAASAATSDAASSSLKKRFKRREIEAIQCEVRKMCHYTKLLSTKKNLDHVNKILKAKRLQRQSKTGNNFVKKRRGRPRKQPSQFDEDSRDQMPVLEKCVDLPSKRGQKPSLSPLALEPASGQDAVMATIEAVIHMAREAPPLPPPPPPPLPPPPPPPPPPPPPLPKTARGGKRKHRPQPPAQPVQSPPQPLPQEEEVKAKRPRKSRASESDVLP
SIO_010081: Setbp1
subclass of: SO_0000673
so part of: Setbp1
location: join(10884068..10884097,10888380..10888433,10943881..10947328,11018828..11018998,11046317..11046930)
location: region:10884068-11046930:1
so has part: feature:10884068-10884097:1:exon
so has part: feature:10888380-10888433:1:exon
so has part: feature:10943881-10947328:1:exon
so has part: feature:11018828-11018998:1:exon
so has part: feature:11046317-11046930:1:exon

XP_034374428.1
type: Protein
SIO_000068: ncbiprotein

position:11046930:1
position: 11046930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10884068-10884097:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10888380-10888433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10943881-10947328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11018828-11018998:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11046317-11046930:1:exon

LOC117719575
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11103974..11104432
location: region:11103974-11104432:1
so has part: feature:11103974-11104432:1:exon

117719575
type: Gene
SIO_000068: ncbigene

position:11103974:1
position: 11103974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11104432:1
position: 11104432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11103974-11104432:1:exon

LOC117719575
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117719575
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117719575
subclass of: SO_0000673
so part of: LOC117719575
location: 11103974..11104432
location: region:11103974-11104432:1
so has part: feature:11103974-11104432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11103974-11104432:1:exon

LOC117720294
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720294
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(11142357..11142508)
location: region:11142357-11142508:-1
so has part: feature:11142357-11142508:-1:exon

117720294
type: Gene
SIO_000068: ncbigene

position:11142357:-1
position: 11142357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11142508:-1
position: 11142508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11142357-11142508:-1:exon

LOC117720294
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720294
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117720294
subclass of: SO_0000673
so part of: LOC117720294
location: complement(11142357..11142508)
location: region:11142357-11142508:-1
so has part: feature:11142357-11142508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11142357-11142508:-1:exon

Slc14a2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slc14a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11196051..11623173
location: region:11196051-11623173:1
so has part: feature:11196051-11623173:1:exon
subclass of: SO_0000010

117719803
type: Gene
SIO_000068: ncbigene

position:11196051:1
position: 11196051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11623173:1
position: 11623173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11196051-11623173:1:exon

Slc14a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc14a2
product: solute carrier family 14 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 58 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518114.1
SIO_010081: Slc14a2
subclass of: SO_0000673
so part of: Slc14a2
location: join(11196051..11196296,11206105..11206235,11445387..11445452,11558919..11559103,11560918..11561098,11562097..11562286,11571425..11571553,11575437..11575629,11581711..11581858,11582930..11583064,11583485..11583534,11584026..11584200,11604143..11604268,11607587..11607669,11608369..11608528,11609229..11609418,11610427..11610555,11611423..11611615,11613120..11613267,11613872..11614006,11618917..11618966,11622194..11623173)
location: region:11196051-11623173:1
so has part: feature:11196051-11196296:1:exon
so has part: feature:11206105-11206235:1:exon
so has part: feature:11445387-11445452:1:exon
so has part: feature:11558919-11559103:1:exon
so has part: feature:11560918-11561098:1:exon
so has part: feature:11562097-11562286:1:exon
so has part: feature:11571425-11571553:1:exon
so has part: feature:11575437-11575629:1:exon
so has part: feature:11581711-11581858:1:exon
so has part: feature:11582930-11583064:1:exon
so has part: feature:11583485-11583534:1:exon
so has part: feature:11584026-11584200:1:exon
so has part: feature:11604143-11604268:1:exon
so has part: feature:11607587-11607669:1:exon
so has part: feature:11608369-11608528:1:exon
so has part: feature:11609229-11609418:1:exon
so has part: feature:11610427-11610555:1:exon
so has part: feature:11611423-11611615:1:exon
so has part: feature:11613120-11613267:1:exon
so has part: feature:11613872-11614006:1:exon
so has part: feature:11618917-11618966:1:exon
so has part: feature:11622194-11623173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11196051-11196296:1:exon

position:11196296:1
position: 11196296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11206105-11206235:1:exon

position:11206105:1
position: 11206105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11206235:1
position: 11206235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11445387-11445452:1:exon

position:11445387:1
position: 11445387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11445452:1
position: 11445452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11558919-11559103:1:exon

position:11558919:1
position: 11558919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11559103:1
position: 11559103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11560918-11561098:1:exon

position:11560918:1
position: 11560918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11561098:1
position: 11561098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11562097-11562286:1:exon

position:11562097:1
position: 11562097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11562286:1
position: 11562286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11571425-11571553:1:exon

position:11571425:1
position: 11571425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11571553:1
position: 11571553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11575437-11575629:1:exon

position:11575437:1
position: 11575437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11575629:1
position: 11575629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11581711-11581858:1:exon

position:11581711:1
position: 11581711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11581858:1
position: 11581858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11582930-11583064:1:exon

position:11582930:1
position: 11582930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11583064:1
position: 11583064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11583485-11583534:1:exon

position:11583485:1
position: 11583485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11583534:1
position: 11583534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11584026-11584200:1:exon

position:11584026:1
position: 11584026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11584200:1
position: 11584200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11604143-11604268:1:exon

position:11604143:1
position: 11604143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11604268:1
position: 11604268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11607587-11607669:1:exon

position:11607587:1
position: 11607587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11607669:1
position: 11607669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11608369-11608528:1:exon

position:11608369:1
position: 11608369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11608528:1
position: 11608528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11609229-11609418:1:exon

position:11609229:1
position: 11609229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11609418:1
position: 11609418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11610427-11610555:1:exon

position:11610427:1
position: 11610427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11610555:1
position: 11610555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11611423-11611615:1:exon

position:11611423:1
position: 11611423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11611615:1
position: 11611615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11613120-11613267:1:exon

position:11613120:1
position: 11613120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11613267:1
position: 11613267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11613872-11614006:1:exon

position:11613872:1
position: 11613872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11614006:1
position: 11614006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11618917-11618966:1:exon

position:11618917:1
position: 11618917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11618966:1
position: 11618966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11622194-11623173:1:exon

position:11622194:1
position: 11622194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc14a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc14a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urea transporter 2 isoform X1
translation: MSDHPLKEMSDSNSSPLLPEPLSSRYKLYESELSSPTWPSSSQDTHPALPLLEMPEEKDLRSSDEDSHIVKIEKPNERNKRRESEVPRRASAGRGGFSLFQAVSYLTGDMKECKNWLKDKPLVLQFLDWVLRGAAQVMFVNNPLSGLIIFIGLLIQNPWWTIAGALGTVASTLAALALSQDRSAIASGLHGYNGMLVGLLMAVFSEKLDYYWWLLFPVTFTSMACPVVSSALSTIFAKWDLPVFTLPFNITLTLYLAATGHYNLFFPTTLVEPVSSAPNITWTEIKMPLLLQTIPVGVGQVYGCDNPWTGGVILVALFISSPLICLHAAIGSIVGLLAALTVATPFETIYMGLWSYNCVLSCVAIGGMFYALTWQTHLLSLVCALFCAYMGAALTNMMAVVGVPPGTWAFCLSTLTFLLLTSNNPGIYKLPLSKVTYPEANRIYFLTMRRSEEEKAPNGGSGEQSHRTGQWKAEEGSETVLPRRRSVFHIEWSSIRRRSKVFGKGEHQERQTKEPLPCPYRKPTVELFDLDTMEESSEIKVEANTTRTSWIQSSMVAGGKRFSKALSYITGEMKECGEGLKDKSPVFQFLDWVLRGMSQVMFVNNPLSGTLIVLGLFVQNPWWAILGCLGTIMSTLTALILSQDKSAIAAGLHGYNGVLVGLLMAVFSDKGNYYWWLLLPVIVMSMTCPILSSALNTIFSKWDLPVFTLPFNIAVTLYLAATGHHNLFFPTTLLQPATTTPNITWSEVQVPLLLRAIPVGIGQVYGCDNPWTGGIFLVALFISSPLICLHAAIGSTIGMLAALSIATPFDNIYFGLCGFNSTLACIAVGGMFYVITWQTHLLAIACALFAAYLGAALANMLSVFGLPPCTWPFCLSALTFLLLTTNNPGIYKLPLSKVTYPEANRIYFLSQEKNRRASTITKYQAYDVS
SIO_010081: Slc14a2
subclass of: SO_0000673
so part of: Slc14a2
location: join(11558930..11559103,11560918..11561098,11562097..11562286,11571425..11571553,11575437..11575629,11581711..11581858,11582930..11583064,11583485..11583534,11584026..11584200,11604143..11604268,11607587..11607669,11608369..11608528,11609229..11609418,11610427..11610555,11611423..11611615,11613120..11613267,11613872..11614006,11618917..11618966,11622194..11622394)
location: region:11558930-11622394:1
so has part: feature:11558930-11559103:1:exon
so has part: feature:11560918-11561098:1:exon
so has part: feature:11562097-11562286:1:exon
so has part: feature:11571425-11571553:1:exon
so has part: feature:11575437-11575629:1:exon
so has part: feature:11581711-11581858:1:exon
so has part: feature:11582930-11583064:1:exon
so has part: feature:11583485-11583534:1:exon
so has part: feature:11584026-11584200:1:exon
so has part: feature:11604143-11604268:1:exon
so has part: feature:11607587-11607669:1:exon
so has part: feature:11608369-11608528:1:exon
so has part: feature:11609229-11609418:1:exon
so has part: feature:11610427-11610555:1:exon
so has part: feature:11611423-11611615:1:exon
so has part: feature:11613120-11613267:1:exon
so has part: feature:11613872-11614006:1:exon
so has part: feature:11618917-11618966:1:exon
so has part: feature:11622194-11622394:1:exon

XP_034374005.1
type: Protein
SIO_000068: ncbiprotein

position:11558930:1
position: 11558930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11622394:1
position: 11622394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11558930-11559103:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11560918-11561098:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11562097-11562286:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11571425-11571553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11575437-11575629:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11581711-11581858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11582930-11583064:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11583485-11583534:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11584026-11584200:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11604143-11604268:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11607587-11607669:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11608369-11608528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11609229-11609418:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11610427-11610555:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11611423-11611615:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11613120-11613267:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11613872-11614006:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11618917-11618966:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11622194-11622394:1:exon

Slc14a2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc14a2
product: solute carrier family 14 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518115.1
SIO_010081: Slc14a2
subclass of: SO_0000673
so part of: Slc14a2
location: join(11561544..11561731,11562097..11562286,11571425..11571553,11575437..11575629,11581711..11581858,11582930..11583064,11583485..11583534,11584026..11584427)
location: region:11561544-11584427:1
so has part: feature:11561544-11561731:1:exon
so has part: feature:11562097-11562286:1:exon
so has part: feature:11571425-11571553:1:exon
so has part: feature:11575437-11575629:1:exon
so has part: feature:11581711-11581858:1:exon
so has part: feature:11582930-11583064:1:exon
so has part: feature:11583485-11583534:1:exon
so has part: feature:11584026-11584427:1:exon

position:11561544:1
position: 11561544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11584427:1
position: 11584427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11561544-11561731:1:exon

position:11561731:1
position: 11561731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11562097-11562286:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11571425-11571553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11575437-11575629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11581711-11581858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11582930-11583064:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11583485-11583534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11584026-11584427:1:exon

Slc14a2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc14a2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urea transporter 2 isoform X2
translation: MFVNNPLSGLIIFIGLLIQNPWWTIAGALGTVASTLAALALSQDRSAIASGLHGYNGMLVGLLMAVFSEKLDYYWWLLFPVTFTSMACPVVSSALSTIFAKWDLPVFTLPFNITLTLYLAATGHYNLFFPTTLVEPVSSAPNITWTEIKMPLLLQTIPVGVGQVYGCDNPWTGGVILVALFISSPLICLHAAIGSIVGLLAALTVATPFETIYMGLWSYNCVLSCVAIGGMFYALTWQTHLLSLVCALFCAYMGAALTNMMAVVGVPPGTWAFCLSTLTFLLLTSNNPGIYKLPLSKVTYPEANRIYFLTMRRSEEEKAPNGD
SIO_010081: Slc14a2
subclass of: SO_0000673
so part of: Slc14a2
location: join(11562153..11562286,11571425..11571553,11575437..11575629,11581711..11581858,11582930..11583064,11583485..11583534,11584026..11584208)
location: region:11562153-11584208:1
so has part: feature:11562153-11562286:1:exon
so has part: feature:11571425-11571553:1:exon
so has part: feature:11575437-11575629:1:exon
so has part: feature:11581711-11581858:1:exon
so has part: feature:11582930-11583064:1:exon
so has part: feature:11583485-11583534:1:exon
so has part: feature:11584026-11584208:1:exon

XP_034374006.1
type: Protein
SIO_000068: ncbiprotein

position:11562153:1
position: 11562153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11584208:1
position: 11584208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11562153-11562286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11571425-11571553:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11575437-11575629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11581711-11581858:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11582930-11583064:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11583485-11583534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11584026-11584208:1:exon

LOC117720166
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720166
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11644135..11668053
location: region:11644135-11668053:1
so has part: feature:11644135-11668053:1:exon
subclass of: SO_0000010

117720166
type: Gene
SIO_000068: ncbigene

position:11644135:1
position: 11644135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11668053:1
position: 11668053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11644135-11668053:1:exon

LOC117720166
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117720166
product: urea transporter 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 long SRA reads, 20 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034518635.1
SIO_010081: LOC117720166
subclass of: SO_0000673
so part of: LOC117720166
location: join(11644135..11644271,11650719..11650875,11651343..11651532,11653484..11653612,11655837..11656029,11657247..11657394,11657594..11657728,11663542..11663591,11665344..11668053)
location: region:11644135-11668053:1
so has part: feature:11644135-11644271:1:exon
so has part: feature:11650719-11650875:1:exon
so has part: feature:11651343-11651532:1:exon
so has part: feature:11653484-11653612:1:exon
so has part: feature:11655837-11656029:1:exon
so has part: feature:11657247-11657394:1:exon
so has part: feature:11657594-11657728:1:exon
so has part: feature:11663542-11663591:1:exon
so has part: feature:11665344-11668053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11644135-11644271:1:exon

position:11644271:1
position: 11644271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11650719-11650875:1:exon

position:11650719:1
position: 11650719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11650875:1
position: 11650875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11651343-11651532:1:exon

position:11651343:1
position: 11651343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11651532:1
position: 11651532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11653484-11653612:1:exon

position:11653484:1
position: 11653484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11653612:1
position: 11653612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11655837-11656029:1:exon

position:11655837:1
position: 11655837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11656029:1
position: 11656029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11657247-11657394:1:exon

position:11657247:1
position: 11657247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11657394:1
position: 11657394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11657594-11657728:1:exon

position:11657594:1
position: 11657594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11657728:1
position: 11657728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11663542-11663591:1:exon

position:11663542:1
position: 11663542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11663591:1
position: 11663591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11665344-11668053:1:exon

position:11665344:1
position: 11665344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117720166
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117720166
product: urea transporter 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 long SRA reads, 23 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034518634.1
SIO_010081: LOC117720166
subclass of: SO_0000673
so part of: LOC117720166
location: join(11646977..11647136,11650719..11650875,11651343..11651532,11653484..11653612,11655837..11656029,11657247..11657394,11657594..11657728,11663542..11663591,11665344..11668053)
location: region:11646977-11668053:1
so has part: feature:11646977-11647136:1:exon
so has part: feature:11650719-11650875:1:exon
so has part: feature:11651343-11651532:1:exon
so has part: feature:11653484-11653612:1:exon
so has part: feature:11655837-11656029:1:exon
so has part: feature:11657247-11657394:1:exon
so has part: feature:11657594-11657728:1:exon
so has part: feature:11663542-11663591:1:exon
so has part: feature:11665344-11668053:1:exon

position:11646977:1
position: 11646977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11646977-11647136:1:exon

position:11647136:1
position: 11647136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11650719-11650875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11651343-11651532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11653484-11653612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11655837-11656029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11657247-11657394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11657594-11657728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11663542-11663591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11665344-11668053:1:exon

LOC117720166
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117720166
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urea transporter 1 isoform X1
translation: MNGQSLIGGTDDAHHGPLWIDPFGSAPGGFRRLSLVLAHRWQEQEPEEEVAMEDSPTMVKIDRGENQMLSCQGRRRGLQVLGYVTGDMKEFANWLKDKPVVLQFMDWIFRGISQVVFVSNPISGILILVGLLVQNPWWALCGCVGTVVSTLTALLLSQDRSAIAAGLQGYNATLVGILMAVFSDKGDYFWWLLFPVSAMSMTCPVFSSALSSLLSKWDLPVFTLPFNMALSLYLSATGHYNTFFPSKLFTPISAVPNITWSELNALELLKSLPTGVGQIYGCDNPWTGGIFLCAILLSSPLMCLHAAIGSLLGVIAGLSLAAPFEDIYSGLWGFNSSLACIAIGGMFMALTWQTHLLALACALFTAYFGACMTNLMAVVHLPACTWSFCLATLLFLLLTTKNPNIYRMPLSKVTYSEENRIFYLQNKKRIVESPL
SIO_010081: LOC117720166
subclass of: SO_0000673
so part of: LOC117720166
location: join(11647005..11647136,11650719..11650875,11651343..11651532,11653484..11653612,11655837..11656029,11657247..11657394,11657594..11657728,11663542..11663591,11665344..11665517)
location: region:11647005-11665517:1
so has part: feature:11647005-11647136:1:exon
so has part: feature:11650719-11650875:1:exon
so has part: feature:11651343-11651532:1:exon
so has part: feature:11653484-11653612:1:exon
so has part: feature:11655837-11656029:1:exon
so has part: feature:11657247-11657394:1:exon
so has part: feature:11657594-11657728:1:exon
so has part: feature:11663542-11663591:1:exon
so has part: feature:11665344-11665517:1:exon

XP_034374525.1
type: Protein
SIO_000068: ncbiprotein

position:11647005:1
position: 11647005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11665517:1
position: 11665517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11647005-11647136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11650719-11650875:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11651343-11651532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11653484-11653612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11655837-11656029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11657247-11657394:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11657594-11657728:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11663542-11663591:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11665344-11665517:1:exon

LOC117720166
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117720166
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urea transporter 1 isoform X2
translation: MEDSPTMVKIDRGENQMLSCQGRRRGLQVLGYVTGDMKEFANWLKDKPVVLQFMDWIFRGISQVVFVSNPISGILILVGLLVQNPWWALCGCVGTVVSTLTALLLSQDRSAIAAGLQGYNATLVGILMAVFSDKGDYFWWLLFPVSAMSMTCPVFSSALSSLLSKWDLPVFTLPFNMALSLYLSATGHYNTFFPSKLFTPISAVPNITWSELNALELLKSLPTGVGQIYGCDNPWTGGIFLCAILLSSPLMCLHAAIGSLLGVIAGLSLAAPFEDIYSGLWGFNSSLACIAIGGMFMALTWQTHLLALACALFTAYFGACMTNLMAVVHLPACTWSFCLATLLFLLLTTKNPNIYRMPLSKVTYSEENRIFYLQNKKRIVESPL
SIO_010081: LOC117720166
subclass of: SO_0000673
so part of: LOC117720166
location: join(11650740..11650875,11651343..11651532,11653484..11653612,11655837..11656029,11657247..11657394,11657594..11657728,11663542..11663591,11665344..11665517)
location: region:11650740-11665517:1
so has part: feature:11650740-11650875:1:exon
so has part: feature:11651343-11651532:1:exon
so has part: feature:11653484-11653612:1:exon
so has part: feature:11655837-11656029:1:exon
so has part: feature:11657247-11657394:1:exon
so has part: feature:11657594-11657728:1:exon
so has part: feature:11663542-11663591:1:exon
so has part: feature:11665344-11665517:1:exon

XP_034374526.1
type: Protein
SIO_000068: ncbiprotein

position:11650740:1
position: 11650740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11650740-11650875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11651343-11651532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11653484-11653612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11655837-11656029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11657247-11657394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11657594-11657728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11663542-11663591:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11665344-11665517:1:exon

Siglec15
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Siglec15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11710347..11723983
location: region:11710347-11723983:1
so has part: feature:11710347-11723983:1:exon
subclass of: SO_0000010

117719516
type: Gene
SIO_000068: ncbigene

position:11710347:1
position: 11710347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11723983:1
position: 11723983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11710347-11723983:1:exon

Siglec15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Siglec15
product: sialic acid binding Ig like lectin 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_034517631.1
SIO_010081: Siglec15
subclass of: SO_0000673
so part of: Siglec15
location: join(11710347..11710398,11718299..11718358,11718787..11719170,11719824..11720195,11721195..11721225,11723857..11723983)
location: region:11710347-11723983:1
so has part: feature:11710347-11710398:1:exon
so has part: feature:11718299-11718358:1:exon
so has part: feature:11718787-11719170:1:exon
so has part: feature:11719824-11720195:1:exon
so has part: feature:11721195-11721225:1:exon
so has part: feature:11723857-11723983:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11710347-11710398:1:exon

position:11710398:1
position: 11710398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11718299-11718358:1:exon

position:11718299:1
position: 11718299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11718358:1
position: 11718358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11718787-11719170:1:exon

position:11718787:1
position: 11718787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11719170:1
position: 11719170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11719824-11720195:1:exon

position:11719824:1
position: 11719824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11720195:1
position: 11720195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11721195-11721225:1:exon

position:11721195:1
position: 11721195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11721225:1
position: 11721225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11723857-11723983:1:exon

position:11723857:1
position: 11723857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Siglec15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Siglec15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sialic acid-binding Ig-like lectin 15
translation: MEGSLQLLACLACVLQMGSLVKTRRDASGNMLNTEAHNAPTQRWSMQVPAEVIAEAGDAAVLPCTFTHPHRHYDGPLTAIWRAGEPYAGPQVFRCTAAPGSELCQTALSLHGRLRLLGNPRRNDLSLRIERLALADSGRYFCRVEFTGDAHDRYESRHGVRLRVTAAPRIVNISVLPGPAHAFRALCTAEGEPPPALAWSVPALGNSSAAVQAQGHGYQVTAELPALTRDGRYTCTAANSLGRAEASVYLFRFHGAPGASTLALLLGALGLKALLLLGILGARATRRRLDHLVAQDTPPRSQAQESNYENLSQMSPPGHQLPRVCCEELVSHHHPVIHHEK
SIO_010081: Siglec15
subclass of: SO_0000673
so part of: Siglec15
location: join(11710347..11710398,11718299..11718358,11718787..11719170,11719824..11720195,11721195..11721225,11723857..11723983)
location: region:11710347-11723983:1
so has part: feature:11710347-11710398:1:exon
so has part: feature:11718299-11718358:1:exon
so has part: feature:11718787-11719170:1:exon
so has part: feature:11719824-11720195:1:exon
so has part: feature:11721195-11721225:1:exon
so has part: feature:11723857-11723983:1:exon

XP_034373522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11710347-11710398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11718299-11718358:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11718787-11719170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11719824-11720195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11721195-11721225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11723857-11723983:1:exon

Epg5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Epg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11730164..11837434)
location: region:11730164-11837434:-1
so has part: feature:11730164-11837434:-1:exon
subclass of: SO_0000010

117720074
type: Gene
SIO_000068: ncbigene

position:11730164:-1
position: 11730164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11837434:-1
position: 11837434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11730164-11837434:-1:exon

Epg5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Epg5
product: ectopic P-granules autophagy protein 5 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518538.1
SIO_010081: Epg5
subclass of: SO_0000673
so part of: Epg5
location: complement(join(11730164..11732298,11735648..11735762,11735916..11736131,11736762..11736978,11738362..11738604,11744137..11744281,11744702..11744911,11745355..11745540,11747393..11747568,11749017..11749120,11750381..11750453,11751456..11751657,11752448..11752596,11753130..11753343,11754426..11754620,11762858..11763014,11764237..11764379,11775936..11776098,11777632..11777803,11781512..11781656,11783518..11783641,11785187..11785408,11786635..11786801,11788257..11788376,11789609..11789719,11790420..11790617,11790776..11790920,11792627..11792767,11795412..11795668,11796377..11796496,11798704..11798868,11802513..11802653,11805345..11805499,11807788..11807945,11809523..11809678,11810759..11810909,11811271..11811385,11813946..11814051,11815516..11815589,11816620..11816727,11817289..11817425,11823447..11823690,11825262..11826191,11828225..11828287,11837375..11837434))
location: region:11730164-11837434:-1
so has part: feature:11837375-11837434:-1:exon
so has part: feature:11828225-11828287:-1:exon
so has part: feature:11825262-11826191:-1:exon
so has part: feature:11823447-11823690:-1:exon
so has part: feature:11817289-11817425:-1:exon
so has part: feature:11816620-11816727:-1:exon
so has part: feature:11815516-11815589:-1:exon
so has part: feature:11813946-11814051:-1:exon
so has part: feature:11811271-11811385:-1:exon
so has part: feature:11810759-11810909:-1:exon
so has part: feature:11809523-11809678:-1:exon
so has part: feature:11807788-11807945:-1:exon
so has part: feature:11805345-11805499:-1:exon
so has part: feature:11802513-11802653:-1:exon
so has part: feature:11798704-11798868:-1:exon
so has part: feature:11796377-11796496:-1:exon
so has part: feature:11795412-11795668:-1:exon
so has part: feature:11792627-11792767:-1:exon
so has part: feature:11790776-11790920:-1:exon
so has part: feature:11790420-11790617:-1:exon
so has part: feature:11789609-11789719:-1:exon
so has part: feature:11788257-11788376:-1:exon
so has part: feature:11786635-11786801:-1:exon
so has part: feature:11785187-11785408:-1:exon
so has part: feature:11783518-11783641:-1:exon
so has part: feature:11781512-11781656:-1:exon
so has part: feature:11777632-11777803:-1:exon
so has part: feature:11775936-11776098:-1:exon
so has part: feature:11764237-11764379:-1:exon
so has part: feature:11762858-11763014:-1:exon
so has part: feature:11754426-11754620:-1:exon
so has part: feature:11753130-11753343:-1:exon
so has part: feature:11752448-11752596:-1:exon
so has part: feature:11751456-11751657:-1:exon
so has part: feature:11750381-11750453:-1:exon
so has part: feature:11749017-11749120:-1:exon
so has part: feature:11747393-11747568:-1:exon
so has part: feature:11745355-11745540:-1:exon
so has part: feature:11744702-11744911:-1:exon
so has part: feature:11744137-11744281:-1:exon
so has part: feature:11738362-11738604:-1:exon
so has part: feature:11736762-11736978:-1:exon
so has part: feature:11735916-11736131:-1:exon
so has part: feature:11735648-11735762:-1:exon
so has part: feature:11730164-11732298:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11837375-11837434:-1:exon

position:11837375:-1
position: 11837375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11828225-11828287:-1:exon

position:11828225:-1
position: 11828225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11828287:-1
position: 11828287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11825262-11826191:-1:exon

position:11825262:-1
position: 11825262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11826191:-1
position: 11826191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11823447-11823690:-1:exon

position:11823447:-1
position: 11823447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11823690:-1
position: 11823690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11817289-11817425:-1:exon

position:11817289:-1
position: 11817289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11817425:-1
position: 11817425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11816620-11816727:-1:exon

position:11816620:-1
position: 11816620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11816727:-1
position: 11816727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11815516-11815589:-1:exon

position:11815516:-1
position: 11815516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11815589:-1
position: 11815589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11813946-11814051:-1:exon

position:11813946:-1
position: 11813946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11814051:-1
position: 11814051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11811271-11811385:-1:exon

position:11811271:-1
position: 11811271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11811385:-1
position: 11811385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11810759-11810909:-1:exon

position:11810759:-1
position: 11810759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11810909:-1
position: 11810909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11809523-11809678:-1:exon

position:11809523:-1
position: 11809523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11809678:-1
position: 11809678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11807788-11807945:-1:exon

position:11807788:-1
position: 11807788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11807945:-1
position: 11807945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11805345-11805499:-1:exon

position:11805345:-1
position: 11805345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11805499:-1
position: 11805499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11802513-11802653:-1:exon

position:11802513:-1
position: 11802513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11802653:-1
position: 11802653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11798704-11798868:-1:exon

position:11798704:-1
position: 11798704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11798868:-1
position: 11798868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11796377-11796496:-1:exon

position:11796377:-1
position: 11796377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11796496:-1
position: 11796496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11795412-11795668:-1:exon

position:11795412:-1
position: 11795412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11795668:-1
position: 11795668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11792627-11792767:-1:exon

position:11792627:-1
position: 11792627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11792767:-1
position: 11792767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11790776-11790920:-1:exon

position:11790776:-1
position: 11790776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11790920:-1
position: 11790920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11790420-11790617:-1:exon

position:11790420:-1
position: 11790420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11790617:-1
position: 11790617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11789609-11789719:-1:exon

position:11789609:-1
position: 11789609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11789719:-1
position: 11789719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11788257-11788376:-1:exon

position:11788257:-1
position: 11788257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11788376:-1
position: 11788376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11786635-11786801:-1:exon

position:11786635:-1
position: 11786635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11786801:-1
position: 11786801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:11785187-11785408:-1:exon

position:11785187:-1
position: 11785187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11785408:-1
position: 11785408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:11783518-11783641:-1:exon

position:11783518:-1
position: 11783518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11783641:-1
position: 11783641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:11781512-11781656:-1:exon

position:11781512:-1
position: 11781512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11781656:-1
position: 11781656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:11777632-11777803:-1:exon

position:11777632:-1
position: 11777632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11777803:-1
position: 11777803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:11775936-11776098:-1:exon

position:11775936:-1
position: 11775936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11776098:-1
position: 11776098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:11764237-11764379:-1:exon

position:11764237:-1
position: 11764237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11764379:-1
position: 11764379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:11762858-11763014:-1:exon

position:11762858:-1
position: 11762858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11763014:-1
position: 11763014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:11754426-11754620:-1:exon

position:11754426:-1
position: 11754426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11754620:-1
position: 11754620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:11753130-11753343:-1:exon

position:11753130:-1
position: 11753130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11753343:-1
position: 11753343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:11752448-11752596:-1:exon

position:11752448:-1
position: 11752448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11752596:-1
position: 11752596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:11751456-11751657:-1:exon

position:11751456:-1
position: 11751456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11751657:-1
position: 11751657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:11750381-11750453:-1:exon

position:11750381:-1
position: 11750381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11750453:-1
position: 11750453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:11749017-11749120:-1:exon

position:11749017:-1
position: 11749017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11749120:-1
position: 11749120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:11747393-11747568:-1:exon

position:11747393:-1
position: 11747393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11747568:-1
position: 11747568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:11745355-11745540:-1:exon

position:11745355:-1
position: 11745355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11745540:-1
position: 11745540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:11744702-11744911:-1:exon

position:11744702:-1
position: 11744702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11744911:-1
position: 11744911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:11744137-11744281:-1:exon

position:11744137:-1
position: 11744137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11744281:-1
position: 11744281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:11738362-11738604:-1:exon

position:11738362:-1
position: 11738362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11738604:-1
position: 11738604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:11736762-11736978:-1:exon

position:11736762:-1
position: 11736762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11736978:-1
position: 11736978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:11735916-11736131:-1:exon

position:11735916:-1
position: 11735916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11736131:-1
position: 11736131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:11735648-11735762:-1:exon

position:11735648:-1
position: 11735648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11735762:-1
position: 11735762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:11730164-11732298:-1:exon

position:11732298:-1
position: 11732298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Epg5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Epg5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ectopic P granules protein 5 homolog
translation: MAEAVKPRRSKAKASRTKGKITVVNVQIKCAQNGQYQIRDREKKKYEALQTSDAVPLPETRREQEILFPASEFKDDLKVSADSQLHSDVCRWNESEMFDIPLTSLTIGDEGPRIQDTEDLKEKGEITAGDGDDEIELKVDPGDNVSTEGEPSKNLTEVEEHTVSQCGPPESTLQPDFPCTQQGMESSHVRESLTRKEDEEALGCSKVLQNVSWHSSYEAKEVSQPPRVKKLYPELPADIAEVPALVAVKPLLRSERLYPELPSQPELIPFTKEQLKLLEPGSWLENVESYVEEFDNIAHQDRHEFYELLLNYSRCRKQLLLAEAELLTLMSDCQNAKSRLWNFKDEQMAVQGICADQVKVYGHHHYQRVEMNENVLGELKKLFDAKSEHLHQTLTLHSYTSVLSRLQVESYIYTLLNSSAVLRSLAVYQAEQVSKLTESIPSDTCQLKECISVLFMFTRRVSEDTQFREDILLWLQRLVSVLQRVGCPGDHFFLLNHILRCPAGISKWAVPFVQIKVLNNPSGVFHFMQSLALLMSPVKNRAEFMCHMKPSEWKPSSSGPASGNWTLVDEGGEEDEDPETSWILLNEDDLVTLLSQFPFQELFQHLLGFKAKGDYLPETTRPQEMMKIFAFANSLVELLAMGLETFNRARYRQFVKRIGYLIRMTLGYVSDHWAQYVGHSTGMGLTLQPYSMEKLQIEFDELFLRAVLHVLKAKRLGIWLFMSEMPFGTLSVQMLWKLFYLMHQVESGNLQQLCASLQPAECKRQLQDPEHFASFEKCLSSINSSEEICLLTTFAQMARARRTNVDEDFIKIIVLEIYEVSYVTLSTREMFSKVGRELLGAIAAVHPEIISVLLDRVQETIDEVGMVSLYLFKELPLYLWRPSASEIAVIRDWLLSCNLTAVKNKLACVILEGLNWGFSEQGTLHLDQALHTEVALLVLEAYQKYLAQKPYAGLISESMKQVSYLASIVRYGETPETSFNQWAWNLILRLKLHKNDFGRQNFPVIPLRSTVPDMTESSMFHPLLKAVKSGLPIGCYLALAVTAVGHSIEKFCAEGIPLLGMLVQSRHLRAVVHVLDKILPVFYPCQYYLLKNEQFLSNLLLFLQLDSGVPQGVTQQVTQRVAQHLTGTIHGDNVKLLNSMIQAHICVSTQPDEVGPVAVLEFWVQALISQHLWYREQSVLFLMDHLCKTAFHLMQEDCVQKLLYQQHKNALGYHCDRSLLSSLVNWIVAGNITPSFVEGLSTPTQVWFAWTVLNMESIFEEDSQLRRVVERELVINEFSPDQALKKAQVHLKLPIVPSLQRLLIYRWAHQALVTPSDHPLLPLIWQKFFLLYLHRPGPQYGLPVDGCIGRRFFQSPSHITLLKDMKSRLTEVADFHYAASKALRVPAEGSEGTPEQQAGTPGFLTSPELHRELVRLFNVYILWLEDENFQKGDTYIPSLPKHYDVHRLAKVMQNQQDLWMEYVNMERVHHEFQETVALWTQAKLESHSGACSSSAQLDFTDPLLAKARVLSNLEKHEAPHPPLMLQPMRPPVPLISSAVLLTQKDTTQLMCTDLNLLQQQARTATLRESQQVALDGELLETMPKQYVNREEQTTLHLECRGSSGRKCQGAAVVTVQFEGMCKNEAVSQQIHVLQKEVRQFQAEAAQPPALIVVEAAVHAENLITALVNTYKLQPTPGVQKIGISLFFTVVDHVSDETQRHPPTRQFFTSCIEILGQVFISGTKSECRKLLQSILKNRRLCSLLSPFFTPNAAPAEFIQLYEKVVTCLREDNSDLIFMLLTKFDIQQWLNSTKPPLSDRTRLLESIHLALTAWGLEPEEDILMPFNLFCKHWTHLLLYQFPDQYSDVLRLLVQSSAEQLLSPECWKATLRALGCYDPSSQQGAASVESSVLHSASDVLLSDKQVMETVQWLSDFFYKLRLSKLDFKSFGLFSKWSPYMADVKMFLGYLVKRLTDLEIASLAQDPATSSKEVLRSLHSQIIRLFKPWILVLEDTESHQRHYP…
SIO_010081: Epg5
subclass of: SO_0000673
so part of: Epg5
location: complement(join(11732116..11732298,11735648..11735762,11735916..11736131,11736762..11736978,11738362..11738604,11744137..11744281,11744702..11744911,11745355..11745540,11747393..11747568,11749017..11749120,11750381..11750453,11751456..11751657,11752448..11752596,11753130..11753343,11754426..11754620,11762858..11763014,11764237..11764379,11775936..11776098,11777632..11777803,11781512..11781656,11783518..11783641,11785187..11785408,11786635..11786801,11788257..11788376,11789609..11789719,11790420..11790617,11790776..11790920,11792627..11792767,11795412..11795668,11796377..11796496,11798704..11798868,11802513..11802653,11805345..11805499,11807788..11807945,11809523..11809678,11810759..11810909,11811271..11811385,11813946..11814051,11815516..11815589,11816620..11816727,11817289..11817425,11823447..11823690,11825262..11826191,11828225..11828287,11837375..11837434))
location: region:11732116-11837434:-1
so has part: feature:11837375-11837434:-1:exon
so has part: feature:11828225-11828287:-1:exon
so has part: feature:11825262-11826191:-1:exon
so has part: feature:11823447-11823690:-1:exon
so has part: feature:11817289-11817425:-1:exon
so has part: feature:11816620-11816727:-1:exon
so has part: feature:11815516-11815589:-1:exon
so has part: feature:11813946-11814051:-1:exon
so has part: feature:11811271-11811385:-1:exon
so has part: feature:11810759-11810909:-1:exon
so has part: feature:11809523-11809678:-1:exon
so has part: feature:11807788-11807945:-1:exon
so has part: feature:11805345-11805499:-1:exon
so has part: feature:11802513-11802653:-1:exon
so has part: feature:11798704-11798868:-1:exon
so has part: feature:11796377-11796496:-1:exon
so has part: feature:11795412-11795668:-1:exon
so has part: feature:11792627-11792767:-1:exon
so has part: feature:11790776-11790920:-1:exon
so has part: feature:11790420-11790617:-1:exon
so has part: feature:11789609-11789719:-1:exon
so has part: feature:11788257-11788376:-1:exon
so has part: feature:11786635-11786801:-1:exon
so has part: feature:11785187-11785408:-1:exon
so has part: feature:11783518-11783641:-1:exon
so has part: feature:11781512-11781656:-1:exon
so has part: feature:11777632-11777803:-1:exon
so has part: feature:11775936-11776098:-1:exon
so has part: feature:11764237-11764379:-1:exon
so has part: feature:11762858-11763014:-1:exon
so has part: feature:11754426-11754620:-1:exon
so has part: feature:11753130-11753343:-1:exon
so has part: feature:11752448-11752596:-1:exon
so has part: feature:11751456-11751657:-1:exon
so has part: feature:11750381-11750453:-1:exon
so has part: feature:11749017-11749120:-1:exon
so has part: feature:11747393-11747568:-1:exon
so has part: feature:11745355-11745540:-1:exon
so has part: feature:11744702-11744911:-1:exon
so has part: feature:11744137-11744281:-1:exon
so has part: feature:11738362-11738604:-1:exon
so has part: feature:11736762-11736978:-1:exon
so has part: feature:11735916-11736131:-1:exon
so has part: feature:11735648-11735762:-1:exon
so has part: feature:11732116-11732298:-1:exon

XP_034374429.1
type: Protein
SIO_000068: ncbiprotein

position:11732116:-1
position: 11732116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11837375-11837434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11828225-11828287:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11825262-11826191:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11823447-11823690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11817289-11817425:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11816620-11816727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11815516-11815589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11813946-11814051:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11811271-11811385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11810759-11810909:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11809523-11809678:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11807788-11807945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11805345-11805499:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11802513-11802653:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11798704-11798868:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11796377-11796496:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11795412-11795668:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11792627-11792767:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11790776-11790920:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11790420-11790617:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11789609-11789719:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11788257-11788376:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11786635-11786801:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11785187-11785408:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:11783518-11783641:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:11781512-11781656:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:11777632-11777803:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:11775936-11776098:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:11764237-11764379:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:11762858-11763014:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:11754426-11754620:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:11753130-11753343:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:11752448-11752596:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:11751456-11751657:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:11750381-11750453:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:11749017-11749120:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:11747393-11747568:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:11745355-11745540:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:11744702-11744911:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:11744137-11744281:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:11738362-11738604:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:11736762-11736978:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:11735916-11736131:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:11735648-11735762:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:11732116-11732298:-1:exon

Pstpip2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Pstpip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11842317..11929538)
location: region:11842317-11929538:-1
so has part: feature:11842317-11929538:-1:exon
subclass of: SO_0000010

117719997
type: Gene
SIO_000068: ncbigene

position:11842317:-1
position: 11842317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11929538:-1
position: 11929538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11842317-11929538:-1:exon

Pstpip2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pstpip2
product: proline-serine-threonine phosphatase interacting protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034518468.1
SIO_010081: Pstpip2
subclass of: SO_0000673
so part of: Pstpip2
location: complement(join(11842317..11844235,11846544..11846604,11848244..11848278,11850157..11850238,11851140..11851236,11852058..11852156,11853688..11853767,11853927..11853972,11855179..11855277,11864799..11864861,11872536..11872642,11879213..11879247,11881332..11881409,11892703..11892803,11929338..11929538))
location: region:11842317-11929538:-1
so has part: feature:11929338-11929538:-1:exon
so has part: feature:11892703-11892803:-1:exon
so has part: feature:11881332-11881409:-1:exon
so has part: feature:11879213-11879247:-1:exon
so has part: feature:11872536-11872642:-1:exon
so has part: feature:11864799-11864861:-1:exon
so has part: feature:11855179-11855277:-1:exon
so has part: feature:11853927-11853972:-1:exon
so has part: feature:11853688-11853767:-1:exon
so has part: feature:11852058-11852156:-1:exon
so has part: feature:11851140-11851236:-1:exon
so has part: feature:11850157-11850238:-1:exon
so has part: feature:11848244-11848278:-1:exon
so has part: feature:11846544-11846604:-1:exon
so has part: feature:11842317-11844235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11929338-11929538:-1:exon

position:11929338:-1
position: 11929338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11892703-11892803:-1:exon

position:11892703:-1
position: 11892703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11892803:-1
position: 11892803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11881332-11881409:-1:exon

position:11881332:-1
position: 11881332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11881409:-1
position: 11881409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11879213-11879247:-1:exon

position:11879213:-1
position: 11879213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11879247:-1
position: 11879247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11872536-11872642:-1:exon

position:11872536:-1
position: 11872536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11872642:-1
position: 11872642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11864799-11864861:-1:exon

position:11864799:-1
position: 11864799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11864861:-1
position: 11864861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11855179-11855277:-1:exon

position:11855179:-1
position: 11855179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11855277:-1
position: 11855277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11853927-11853972:-1:exon

position:11853927:-1
position: 11853927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11853972:-1
position: 11853972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11853688-11853767:-1:exon

position:11853688:-1
position: 11853688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11853767:-1
position: 11853767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11852058-11852156:-1:exon

position:11852058:-1
position: 11852058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11852156:-1
position: 11852156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11851140-11851236:-1:exon

position:11851140:-1
position: 11851140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11851236:-1
position: 11851236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11850157-11850238:-1:exon

position:11850157:-1
position: 11850157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11850238:-1
position: 11850238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11848244-11848278:-1:exon

position:11848244:-1
position: 11848244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11848278:-1
position: 11848278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11846544-11846604:-1:exon

position:11846544:-1
position: 11846544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11846604:-1
position: 11846604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11842317-11844235:-1:exon

position:11844235:-1
position: 11844235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Pstpip2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pstpip2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-serine-threonine phosphatase-interacting protein 2
translation: MTGSLFKGNFWSTDILSTIGYDSIIQHLNNGRKNCKEFEEFLKERASIEEKYGKDLLSLARKKPCGQSEINTLKRALEVFKQQVDNVAQCHIQLAQTLREEARKMEEFRERQKLQRKKTETIMDAAHKQKNSQFKKAMDAKKNYEQKCRDKDEAEQAVHRSANVANQRQQEKLFVKLATSKTAVEDSDKAYMLHINMLEKVREDWQSEHIKACEVFEAQECERINFFRNALWLHVNQLSQQCVTNDEMYEQVRKSLETCSIEKDIQYFVNQRKTGQTPPAPIMYENFYSPQRNAAPPGKTTGPNPARRGPLPVPKRIPDEPDYSLVEDYSLLYQ
SIO_010081: Pstpip2
subclass of: SO_0000673
so part of: Pstpip2
location: complement(join(11846555..11846604,11848244..11848278,11850157..11850238,11851140..11851236,11852058..11852156,11853688..11853767,11853927..11853972,11855179..11855277,11864799..11864861,11872536..11872642,11879213..11879247,11881332..11881409,11892703..11892803,11929338..11929370))
location: region:11846555-11929370:-1
so has part: feature:11929338-11929370:-1:exon
so has part: feature:11892703-11892803:-1:exon
so has part: feature:11881332-11881409:-1:exon
so has part: feature:11879213-11879247:-1:exon
so has part: feature:11872536-11872642:-1:exon
so has part: feature:11864799-11864861:-1:exon
so has part: feature:11855179-11855277:-1:exon
so has part: feature:11853927-11853972:-1:exon
so has part: feature:11853688-11853767:-1:exon
so has part: feature:11852058-11852156:-1:exon
so has part: feature:11851140-11851236:-1:exon
so has part: feature:11850157-11850238:-1:exon
so has part: feature:11848244-11848278:-1:exon
so has part: feature:11846555-11846604:-1:exon

XP_034374359.1
type: Protein
SIO_000068: ncbiprotein

position:11846555:-1
position: 11846555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11929370:-1
position: 11929370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11929338-11929370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11892703-11892803:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11881332-11881409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11879213-11879247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11872536-11872642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11864799-11864861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11855179-11855277:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11853927-11853972:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11853688-11853767:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11852058-11852156:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11851140-11851236:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11850157-11850238:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11848244-11848278:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11846555-11846604:-1:exon

Atp5f1a
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Atp5f1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11938451..11947702)
location: region:11938451-11947702:-1
so has part: feature:11938451-11947702:-1:exon
subclass of: SO_0000010

117719996
type: Gene
SIO_000068: ncbigene

position:11938451:-1
position: 11938451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11947702:-1
position: 11947702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11938451-11947702:-1:exon

Atp5f1a
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Atp5f1a
product: ATP synthase F1 subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 mRNAs, 20 long SRA reads, 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518467.1
SIO_010081: Atp5f1a
subclass of: SO_0000673
so part of: Atp5f1a
location: complement(join(11938451..11939010,11939310..11939460,11939901..11940045,11940162..11940269,11940950..11941174,11941275..11941426,11941957..11942105,11942300..11942466,11942632..11942805,11943796..11943965,11945648..11945726,11947353..11947702))
location: region:11938451-11947702:-1
so has part: feature:11947353-11947702:-1:exon
so has part: feature:11945648-11945726:-1:exon
so has part: feature:11943796-11943965:-1:exon
so has part: feature:11942632-11942805:-1:exon
so has part: feature:11942300-11942466:-1:exon
so has part: feature:11941957-11942105:-1:exon
so has part: feature:11941275-11941426:-1:exon
so has part: feature:11940950-11941174:-1:exon
so has part: feature:11940162-11940269:-1:exon
so has part: feature:11939901-11940045:-1:exon
so has part: feature:11939310-11939460:-1:exon
so has part: feature:11938451-11939010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11947353-11947702:-1:exon

position:11947353:-1
position: 11947353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11945648-11945726:-1:exon

position:11945648:-1
position: 11945648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11945726:-1
position: 11945726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11943796-11943965:-1:exon

position:11943796:-1
position: 11943796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11943965:-1
position: 11943965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11942632-11942805:-1:exon

position:11942632:-1
position: 11942632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11942805:-1
position: 11942805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11942300-11942466:-1:exon

position:11942300:-1
position: 11942300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11942466:-1
position: 11942466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11941957-11942105:-1:exon

position:11941957:-1
position: 11941957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11942105:-1
position: 11942105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11941275-11941426:-1:exon

position:11941275:-1
position: 11941275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11941426:-1
position: 11941426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11940950-11941174:-1:exon

position:11940950:-1
position: 11940950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11941174:-1
position: 11941174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11940162-11940269:-1:exon

position:11940162:-1
position: 11940162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11940269:-1
position: 11940269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11939901-11940045:-1:exon

position:11939901:-1
position: 11939901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11940045:-1
position: 11940045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11939310-11939460:-1:exon

position:11939310:-1
position: 11939310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11939460:-1
position: 11939460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11938451-11939010:-1:exon

position:11939010:-1
position: 11939010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Atp5f1a
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Atp5f1a
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit alpha, mitochondrial
translation: MLSVRIAAAVARALPRRAGLVSKNALGSSFVGARNLHASNMQLQKTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIVVSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDSFGGGSLTALPVIETQAGDVSAYIPTNVISITDGQIFLETELFYKGIRPAINVGLSVSRVGSAAQTRAMKQVAGTMKLELAQYREVAAFAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKITKFESAFLSHVISQHQTLLGNIRADGKISEQSDAKLKEIVTNFLAGFEP
SIO_010081: Atp5f1a
subclass of: SO_0000673
so part of: Atp5f1a
location: complement(join(11938929..11939010,11939310..11939460,11939901..11940045,11940162..11940269,11940950..11941174,11941275..11941426,11941957..11942105,11942300..11942466,11942632..11942805,11943796..11943965,11945648..11945726,11947353..11947412))
location: region:11938929-11947412:-1
so has part: feature:11947353-11947412:-1:exon
so has part: feature:11945648-11945726:-1:exon
so has part: feature:11943796-11943965:-1:exon
so has part: feature:11942632-11942805:-1:exon
so has part: feature:11942300-11942466:-1:exon
so has part: feature:11941957-11942105:-1:exon
so has part: feature:11941275-11941426:-1:exon
so has part: feature:11940950-11941174:-1:exon
so has part: feature:11940162-11940269:-1:exon
so has part: feature:11939901-11940045:-1:exon
so has part: feature:11939310-11939460:-1:exon
so has part: feature:11938929-11939010:-1:exon

XP_034374358.1
type: Protein
SIO_000068: ncbiprotein

position:11938929:-1
position: 11938929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11947412:-1
position: 11947412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11947353-11947412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11945648-11945726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11943796-11943965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11942632-11942805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11942300-11942466:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11941957-11942105:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11941275-11941426:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11940950-11941174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11940162-11940269:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11939901-11940045:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11939310-11939460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11938929-11939010:-1:exon

Haus1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Haus1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11947632..11965489
location: region:11947632-11965489:1
so has part: feature:11947632-11965489:1:exon
subclass of: SO_0000010

117719999
type: Gene
SIO_000068: ncbigene

position:11947632:1
position: 11947632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11965489:1
position: 11965489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11947632-11965489:1:exon

Haus1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Haus1
product: HAUS augmin like complex subunit 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034518474.1
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11947632..11947717,11949430..11949493,11954018..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965489)
location: region:11947632-11965489:1
so has part: feature:11947632-11947717:1:exon
so has part: feature:11949430-11949493:1:exon
so has part: feature:11954018-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965489:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11947632-11947717:1:exon

position:11947717:1
position: 11947717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11949430-11949493:1:exon

position:11949430:1
position: 11949430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11949493:1
position: 11949493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11954018-11954192:1:exon

position:11954018:1
position: 11954018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11954192:1
position: 11954192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11957177-11957312:1:exon

position:11957177:1
position: 11957177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11957312:1
position: 11957312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11958354-11958488:1:exon

position:11958354:1
position: 11958354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11958488:1
position: 11958488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11959291-11959414:1:exon

position:11959291:1
position: 11959291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11959414:1
position: 11959414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11959766-11959831:1:exon

position:11959766:1
position: 11959766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11959831:1
position: 11959831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11962787-11962858:1:exon

position:11962787:1
position: 11962787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11962858:1
position: 11962858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11964258-11964305:1:exon

position:11964258:1
position: 11964258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11964305:1
position: 11964305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11965302-11965489:1:exon

position:11965302:1
position: 11965302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Haus1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Haus1
product: HAUS augmin like complex subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034518471.1
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11947715..11947784,11949430..11949493,11954018..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965489)
location: region:11947715-11965489:1
so has part: feature:11947715-11947784:1:exon
so has part: feature:11949430-11949493:1:exon
so has part: feature:11954018-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965489:1:exon

position:11947715:1
position: 11947715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11947715-11947784:1:exon

position:11947784:1
position: 11947784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11949430-11949493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11954018-11954192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11957177-11957312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11958354-11958488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11959291-11959414:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11959766-11959831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11962787-11962858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11964258-11964305:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11965302-11965489:1:exon

Haus1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Haus1
product: HAUS augmin like complex subunit 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034518472.1
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11947726..11947784,11954018..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965489)
location: region:11947726-11965489:1
so has part: feature:11947726-11947784:1:exon
so has part: feature:11954018-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965489:1:exon

position:11947726:1
position: 11947726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11947726-11947784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11954018-11954192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11957177-11957312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11958354-11958488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11959291-11959414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11959766-11959831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11962787-11962858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11964258-11964305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11965302-11965489:1:exon

Haus1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Haus1
product: HAUS augmin like complex subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034518470.1
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11947743..11947835,11949430..11949493,11954018..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965489)
location: region:11947743-11965489:1
so has part: feature:11947743-11947835:1:exon
so has part: feature:11949430-11949493:1:exon
so has part: feature:11954018-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965489:1:exon

position:11947743:1
position: 11947743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11947743-11947835:1:exon

position:11947835:1
position: 11947835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11949430-11949493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11954018-11954192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11957177-11957312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11958354-11958488:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11959291-11959414:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11959766-11959831:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11962787-11962858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11964258-11964305:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11965302-11965489:1:exon

Haus1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Haus1
product: HAUS augmin like complex subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 long SRA read, 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034518469.1
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11953282..11953374,11954018..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965489)
location: region:11953282-11965489:1
so has part: feature:11953282-11953374:1:exon
so has part: feature:11954018-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965489:1:exon

position:11953282:1
position: 11953282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11953282-11953374:1:exon

position:11953374:1
position: 11953374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11954018-11954192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11957177-11957312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11958354-11958488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11959291-11959414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11959766-11959831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11962787-11962858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11964258-11964305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11965302-11965489:1:exon

Haus1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Haus1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HAUS augmin-like complex subunit 1 isoform X1
translation: MAALEEKALQVAEWLKKIFGDHPIPQYEMNSRTTEILYHLSERNRVRDRDISLVIEDLKQKASEYESEAKRLEDFLMESVNFSPANLSNIGSRFLNALVDSAIALEIKDTSLASFIPAVNDLTSDLFRTKSKSEEIKLELGKLEKNLTATLVLEKCLREDLKKAELHLSAERAKVDSRLQNMDFLKTKAAEFRFGIRTAEEQLSARGMDASLSHRSLVALSEKLSELKQQTIPLKKKLESYLDLMPNPSLAQVKIEEAKRELDAIEAELTKKVDMMEL
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11953345..11953374,11954018..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965352)
location: region:11953345-11965352:1
so has part: feature:11953345-11953374:1:exon
so has part: feature:11954018-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965352:1:exon

XP_034374360.1
type: Protein
SIO_000068: ncbiprotein

position:11953345:1
position: 11953345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11965352:1
position: 11965352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11953345-11953374:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11954018-11954192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11957177-11957312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11958354-11958488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11959291-11959414:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11959766-11959831:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11962787-11962858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11964258-11964305:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11965302-11965352:1:exon

Haus1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Haus1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HAUS augmin-like complex subunit 1 isoform X2
translation: MNSRTTEILYHLSERNRVRDRDISLVIEDLKQKASEYESEAKRLEDFLMESVNFSPANLSNIGSRFLNALVDSAIALEIKDTSLASFIPAVNDLTSDLFRTKSKSEEIKLELGKLEKNLTATLVLEKCLREDLKKAELHLSAERAKVDSRLQNMDFLKTKAAEFRFGIRTAEEQLSARGMDASLSHRSLVALSEKLSELKQQTIPLKKKLESYLDLMPNPSLAQVKIEEAKRELDAIEAELTKKVDMMEL
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11954072..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965352)
location: region:11954072-11965352:1
so has part: feature:11954072-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965352:1:exon

XP_034374361.1
type: Protein
SIO_000068: ncbiprotein

position:11954072:1
position: 11954072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11954072-11954192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11957177-11957312:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11958354-11958488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11959291-11959414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11959766-11959831:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11962787-11962858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11964258-11964305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11965302-11965352:1:exon

Haus1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Haus1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HAUS augmin-like complex subunit 1 isoform X2
translation: MNSRTTEILYHLSERNRVRDRDISLVIEDLKQKASEYESEAKRLEDFLMESVNFSPANLSNIGSRFLNALVDSAIALEIKDTSLASFIPAVNDLTSDLFRTKSKSEEIKLELGKLEKNLTATLVLEKCLREDLKKAELHLSAERAKVDSRLQNMDFLKTKAAEFRFGIRTAEEQLSARGMDASLSHRSLVALSEKLSELKQQTIPLKKKLESYLDLMPNPSLAQVKIEEAKRELDAIEAELTKKVDMMEL
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11954072..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965352)
location: region:11954072-11965352:1
so has part: feature:11954072-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965352:1:exon

XP_034374362.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11954072-11954192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11957177-11957312:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11958354-11958488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11959291-11959414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11959766-11959831:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11962787-11962858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11964258-11964305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11965302-11965352:1:exon

Haus1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Haus1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HAUS augmin-like complex subunit 1 isoform X2
translation: MNSRTTEILYHLSERNRVRDRDISLVIEDLKQKASEYESEAKRLEDFLMESVNFSPANLSNIGSRFLNALVDSAIALEIKDTSLASFIPAVNDLTSDLFRTKSKSEEIKLELGKLEKNLTATLVLEKCLREDLKKAELHLSAERAKVDSRLQNMDFLKTKAAEFRFGIRTAEEQLSARGMDASLSHRSLVALSEKLSELKQQTIPLKKKLESYLDLMPNPSLAQVKIEEAKRELDAIEAELTKKVDMMEL
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11954072..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965352)
location: region:11954072-11965352:1
so has part: feature:11954072-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965352:1:exon

XP_034374363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11954072-11954192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11957177-11957312:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11958354-11958488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11959291-11959414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11959766-11959831:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11962787-11962858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11964258-11964305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11965302-11965352:1:exon

Haus1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Haus1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HAUS augmin-like complex subunit 1 isoform X2
translation: MNSRTTEILYHLSERNRVRDRDISLVIEDLKQKASEYESEAKRLEDFLMESVNFSPANLSNIGSRFLNALVDSAIALEIKDTSLASFIPAVNDLTSDLFRTKSKSEEIKLELGKLEKNLTATLVLEKCLREDLKKAELHLSAERAKVDSRLQNMDFLKTKAAEFRFGIRTAEEQLSARGMDASLSHRSLVALSEKLSELKQQTIPLKKKLESYLDLMPNPSLAQVKIEEAKRELDAIEAELTKKVDMMEL
SIO_010081: Haus1
subclass of: SO_0000673
so part of: Haus1
location: join(11954072..11954192,11957177..11957312,11958354..11958488,11959291..11959414,11959766..11959831,11962787..11962858,11964258..11964305,11965302..11965352)
location: region:11954072-11965352:1
so has part: feature:11954072-11954192:1:exon
so has part: feature:11957177-11957312:1:exon
so has part: feature:11958354-11958488:1:exon
so has part: feature:11959291-11959414:1:exon
so has part: feature:11959766-11959831:1:exon
so has part: feature:11962787-11962858:1:exon
so has part: feature:11964258-11964305:1:exon
so has part: feature:11965302-11965352:1:exon

XP_034374365.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11954072-11954192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11957177-11957312:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11958354-11958488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11959291-11959414:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11959766-11959831:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11962787-11962858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11964258-11964305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11965302-11965352:1:exon

C14H18orf25
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: C14H18orf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11996886..12078158
location: region:11996886-12078158:1
so has part: feature:11996886-12078158:1:exon
subclass of: SO_0000010

117719862
type: Gene
SIO_000068: ncbigene

position:11996886:1
position: 11996886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12078158:1
position: 12078158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11996886-12078158:1:exon

C14H18orf25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C14H18orf25
product: chromosome 14 C18orf25 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034518245.1
SIO_010081: C14H18orf25
subclass of: SO_0000673
so part of: C14H18orf25
location: join(11996886..11997066,12031615..12032399,12053578..12053745,12064920..12065046,12074322..12076276)
location: region:11996886-12076276:1
so has part: feature:11996886-11997066:1:exon
so has part: feature:12031615-12032399:1:exon
so has part: feature:12053578-12053745:1:exon
so has part: feature:12064920-12065046:1:exon
so has part: feature:12074322-12076276:1:exon

position:12076276:1
position: 12076276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11996886-11997066:1:exon

position:11997066:1
position: 11997066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12031615-12032399:1:exon

position:12031615:1
position: 12031615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12032399:1
position: 12032399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12053578-12053745:1:exon

position:12053578:1
position: 12053578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12053745:1
position: 12053745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12064920-12065046:1:exon

position:12064920:1
position: 12064920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12065046:1
position: 12065046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12074322-12076276:1:exon

position:12074322:1
position: 12074322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C14H18orf25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C14H18orf25
product: chromosome 14 C18orf25 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034518247.1
SIO_010081: C14H18orf25
subclass of: SO_0000673
so part of: C14H18orf25
location: join(11996922..11997066,12031615..12032399,12064920..12065046,12074322..12078158)
location: region:11996922-12078158:1
so has part: feature:11996922-11997066:1:exon
so has part: feature:12031615-12032399:1:exon
so has part: feature:12064920-12065046:1:exon
so has part: feature:12074322-12078158:1:exon

position:11996922:1
position: 11996922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11996922-11997066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12031615-12032399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12064920-12065046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12074322-12078158:1:exon

C14H18orf25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C14H18orf25
product: chromosome 14 C18orf25 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 2 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518246.1
SIO_010081: C14H18orf25
subclass of: SO_0000673
so part of: C14H18orf25
location: join(11997360..11997644,12031615..12032399,12064920..12065046,12074322..12078158)
location: region:11997360-12078158:1
so has part: feature:11997360-11997644:1:exon
so has part: feature:12031615-12032399:1:exon
so has part: feature:12064920-12065046:1:exon
so has part: feature:12074322-12078158:1:exon

position:11997360:1
position: 11997360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11997360-11997644:1:exon

position:11997644:1
position: 11997644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12031615-12032399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12064920-12065046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12074322-12078158:1:exon

C14H18orf25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C14H18orf25
product: chromosome 14 C18orf25 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034518244.1
SIO_010081: C14H18orf25
subclass of: SO_0000673
so part of: C14H18orf25
location: join(11997370..11997644,12031615..12032399,12053578..12053745,12064920..12065046,12074322..12078158)
location: region:11997370-12078158:1
so has part: feature:11997370-11997644:1:exon
so has part: feature:12031615-12032399:1:exon
so has part: feature:12053578-12053745:1:exon
so has part: feature:12064920-12065046:1:exon
so has part: feature:12074322-12078158:1:exon

position:11997370:1
position: 11997370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11997370-11997644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12031615-12032399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12053578-12053745:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12064920-12065046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12074322-12078158:1:exon

LOC117720244
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117720244
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(12022387..12022503)
location: region:12022387-12022503:-1
so has part: feature:12022387-12022503:-1:exon

117720244
type: Gene
SIO_000068: ncbigene

position:12022387:-1
position: 12022387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12022503:-1
position: 12022503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12022387-12022503:-1:exon

LOC117720244
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117720244
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117720244
subclass of: SO_0000673
so part of: LOC117720244
location: complement(12022387..12022503)
location: region:12022387-12022503:-1
so has part: feature:12022387-12022503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12022387-12022503:-1:exon

C14H18orf25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C14H18orf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C18orf25 homolog isoform X1
translation: MKMEGAVGKVEELIESAAPSKASEQETAKEEDGSVELESQVPKDGVADSTVLSSMPCLLMELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSVEENEPSQSETTVEGDTSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVTKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDTSSDPEVINVDNLLAAAVVQEHSNSVGGQNTGATWRTSELLEAGHMDPGFLGSDKTSVGSAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKHGSGAQCVGSRPTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL
SIO_010081: C14H18orf25
subclass of: SO_0000673
so part of: C14H18orf25
location: join(12031685..12032399,12053578..12053745,12064920..12065046,12074322..12074511)
location: region:12031685-12074511:1
so has part: feature:12031685-12032399:1:exon
so has part: feature:12053578-12053745:1:exon
so has part: feature:12064920-12065046:1:exon
so has part: feature:12074322-12074511:1:exon

XP_034374135.1
type: Protein
SIO_000068: ncbiprotein

position:12031685:1
position: 12031685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12074511:1
position: 12074511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12031685-12032399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12053578-12053745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12064920-12065046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12074322-12074511:1:exon

C14H18orf25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C14H18orf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C18orf25 homolog isoform X1
translation: MKMEGAVGKVEELIESAAPSKASEQETAKEEDGSVELESQVPKDGVADSTVLSSMPCLLMELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSVEENEPSQSETTVEGDTSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVTKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPDGPPVVAHYDMSDTSSDPEVINVDNLLAAAVVQEHSNSVGGQNTGATWRTSELLEAGHMDPGFLGSDKTSVGSAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKHGSGAQCVGSRPTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL
SIO_010081: C14H18orf25
subclass of: SO_0000673
so part of: C14H18orf25
location: join(12031685..12032399,12053578..12053745,12064920..12065046,12074322..12074511)
location: region:12031685-12074511:1
so has part: feature:12031685-12032399:1:exon
so has part: feature:12053578-12053745:1:exon
so has part: feature:12064920-12065046:1:exon
so has part: feature:12074322-12074511:1:exon

XP_034374136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12031685-12032399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12053578-12053745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12064920-12065046:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12074322-12074511:1:exon

C14H18orf25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C14H18orf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C18orf25 homolog isoform X2
translation: MKMEGAVGKVEELIESAAPSKASEQETAKEEDGSVELESQVPKDGVADSTVLSSMPCLLMELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSVEENEPSQSETTVEGDTSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVTKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPGHMDPGFLGSDKTSVGSAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKHGSGAQCVGSRPTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL
SIO_010081: C14H18orf25
subclass of: SO_0000673
so part of: C14H18orf25
location: join(12031685..12032399,12064920..12065046,12074322..12074511)
location: region:12031685-12074511:1
so has part: feature:12031685-12032399:1:exon
so has part: feature:12064920-12065046:1:exon
so has part: feature:12074322-12074511:1:exon

XP_034374137.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12031685-12032399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12064920-12065046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12074322-12074511:1:exon

C14H18orf25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C14H18orf25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C18orf25 homolog isoform X2
translation: MKMEGAVGKVEELIESAAPSKASEQETAKEEDGSVELESQVPKDGVADSTVLSSMPCLLMELRRDSSESQLASTESDKPTTGRVYESDSSNHCMLSPSSSGHLADSDTLSSVEENEPSQSETTVEGDTSGVSGATVGRKSRRSRSESETSTMAAKKNRQSSDKQNGRVTKVKGHRSQKHKERIRLLRQKREAAARKKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPGHMDPGFLGSDKTSVGSAPLNEEINIASSDSEVEIVGVQEHARCVHPRGGVIQSVSSWKHGSGAQCVGSRPTQSWTAVTPQQTWASPAEVVDLTLDEDSRRKYLL
SIO_010081: C14H18orf25
subclass of: SO_0000673
so part of: C14H18orf25
location: join(12031685..12032399,12064920..12065046,12074322..12074511)
location: region:12031685-12074511:1
so has part: feature:12031685-12032399:1:exon
so has part: feature:12064920-12065046:1:exon
so has part: feature:12074322-12074511:1:exon

XP_034374138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12031685-12032399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12064920-12065046:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12074322-12074511:1:exon

Rnf165
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Rnf165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12142995..12245985
location: region:12142995-12245985:1
so has part: feature:12142995-12245985:1:exon
subclass of: SO_0000010

117719864
type: Gene
SIO_000068: ncbigene

position:12142995:1
position: 12142995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12245985:1
position: 12245985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12142995-12245985:1:exon

Rnf165
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rnf165
product: ring finger protein 165, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034518248.1
SIO_010081: Rnf165
subclass of: SO_0000673
so part of: Rnf165
location: join(12142995..12143100,12220216..12220531,12226867..12226977,12234646..12234775,12236813..12236917,12237165..12237260,12241213..12241319,12241735..12245985)
location: region:12142995-12245985:1
so has part: feature:12142995-12143100:1:exon
so has part: feature:12220216-12220531:1:exon
so has part: feature:12226867-12226977:1:exon
so has part: feature:12234646-12234775:1:exon
so has part: feature:12236813-12236917:1:exon
so has part: feature:12237165-12237260:1:exon
so has part: feature:12241213-12241319:1:exon
so has part: feature:12241735-12245985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12142995-12143100:1:exon

position:12143100:1
position: 12143100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12220216-12220531:1:exon

position:12220216:1
position: 12220216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12220531:1
position: 12220531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12226867-12226977:1:exon

position:12226867:1
position: 12226867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12226977:1
position: 12226977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12234646-12234775:1:exon

position:12234646:1
position: 12234646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12234775:1
position: 12234775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12236813-12236917:1:exon

position:12236813:1
position: 12236813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12236917:1
position: 12236917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12237165-12237260:1:exon

position:12237165:1
position: 12237165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12237260:1
position: 12237260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12241213-12241319:1:exon

position:12241213:1
position: 12241213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12241319:1
position: 12241319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12241735-12245985:1:exon

position:12241735:1
position: 12241735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rnf165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rnf165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF165 isoform X1
translation: MVLVHVGYLVLPVFGSVRNRGAPFQRSQHPHATSCRHFHLGPPQPQQLAPDFPLAHPVQSQPGLSAHMAPAHQHSGTLHQSLTPLPTLQFQDVTGPSFLPQALHQQYLLQQQLLEAQHRRLVSHPRRGQDRVSVHPHRLHPGFDFGHQLQTPQPRYLAEGTDWDLSVDAGLSPAQFQVRPIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLGADS
SIO_010081: Rnf165
subclass of: SO_0000673
so part of: Rnf165
location: join(12143040..12143100,12220216..12220531,12226867..12226977,12234646..12234775,12236813..12236917,12237165..12237260,12241213..12241319,12241735..12241852)
location: region:12143040-12241852:1
so has part: feature:12143040-12143100:1:exon
so has part: feature:12220216-12220531:1:exon
so has part: feature:12226867-12226977:1:exon
so has part: feature:12234646-12234775:1:exon
so has part: feature:12236813-12236917:1:exon
so has part: feature:12237165-12237260:1:exon
so has part: feature:12241213-12241319:1:exon
so has part: feature:12241735-12241852:1:exon

XP_034374139.1
type: Protein
SIO_000068: ncbiprotein

position:12143040:1
position: 12143040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12241852:1
position: 12241852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12143040-12143100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12220216-12220531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12226867-12226977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12234646-12234775:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12236813-12236917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12237165-12237260:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12241213-12241319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12241735-12241852:1:exon

Rnf165
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rnf165
product: ring finger protein 165, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034518249.1
SIO_010081: Rnf165
subclass of: SO_0000673
so part of: Rnf165
location: join(12198492..12198531,12220216..12220531,12226867..12226977,12234646..12234775,12236813..12236917,12237165..12237260,12241213..12241319,12241735..12245985)
location: region:12198492-12245985:1
so has part: feature:12198492-12198531:1:exon
so has part: feature:12220216-12220531:1:exon
so has part: feature:12226867-12226977:1:exon
so has part: feature:12234646-12234775:1:exon
so has part: feature:12236813-12236917:1:exon
so has part: feature:12237165-12237260:1:exon
so has part: feature:12241213-12241319:1:exon
so has part: feature:12241735-12245985:1:exon

position:12198492:1
position: 12198492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12198492-12198531:1:exon

position:12198531:1
position: 12198531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12220216-12220531:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12226867-12226977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12234646-12234775:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12236813-12236917:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12237165-12237260:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12241213-12241319:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12241735-12245985:1:exon

LOC117719865
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117719865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12216522..12217253)
location: region:12216522-12217253:-1
so has part: feature:12216522-12217253:-1:exon
subclass of: SO_0000010

117719865
type: Gene
SIO_000068: ncbigene

position:12216522:-1
position: 12216522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12217253:-1
position: 12217253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12216522-12217253:-1:exon

LOC117719865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117719865
product: gem-associated protein 8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518250.1
SIO_010081: LOC117719865
subclass of: SO_0000673
so part of: LOC117719865
location: complement(12216522..12217253)
location: region:12216522-12217253:-1
so has part: feature:12216522-12217253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12216522-12217253:-1:exon

LOC117719865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117719865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gem-associated protein 8-like
translation: MASKWRATSSWYCHPVYARYWQHYHHAMLWMQSHQHVYRKLRDSYFTSPWFFPHGVLPWNSLAYEAWHPWNSQGQHMARQESPYTVSHLKSPGQPLHNSNRTQTSTRENEALYEEEELESDSDDEVECDLSNMEITEELRQYFAQTEKHREERRRQQQLDAERLNDYVNADHGLYLSHHRSVEPPSEKPWERRQAEMKRLYGNSAPKILAMEAAMQLSFDKHCDRKQPKYWPVIPLKF
SIO_010081: LOC117719865
subclass of: SO_0000673
so part of: LOC117719865
location: complement(12216522..12217238)
location: region:12216522-12217238:-1
so has part: feature:12216522-12217238:-1:exon

XP_034374141.1
type: Protein
SIO_000068: ncbiprotein

position:12217238:-1
position: 12217238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12216522-12217238:-1:exon

Rnf165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rnf165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF165 isoform X2
translation: MAPAHQHSGTLHQSLTPLPTLQFQDVTGPSFLPQALHQQYLLQQQLLEAQHRRLVSHPRRGQDRVSVHPHRLHPGFDFGHQLQTPQPRYLAEGTDWDLSVDAGLSPAQFQVRPIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLGADS
SIO_010081: Rnf165
subclass of: SO_0000673
so part of: Rnf165
location: join(12220356..12220531,12226867..12226977,12234646..12234775,12236813..12236917,12237165..12237260,12241213..12241319,12241735..12241852)
location: region:12220356-12241852:1
so has part: feature:12220356-12220531:1:exon
so has part: feature:12226867-12226977:1:exon
so has part: feature:12234646-12234775:1:exon
so has part: feature:12236813-12236917:1:exon
so has part: feature:12237165-12237260:1:exon
so has part: feature:12241213-12241319:1:exon
so has part: feature:12241735-12241852:1:exon

XP_034374140.1
type: Protein
SIO_000068: ncbiprotein

position:12220356:1
position: 12220356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12220356-12220531:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12226867-12226977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12234646-12234775:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12236813-12236917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12237165-12237260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12241213-12241319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12241735-12241852:1:exon

Loxhd1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Loxhd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12266014..12418091)
location: region:12266014-12418091:-1
so has part: feature:12266014-12418091:-1:exon
subclass of: SO_0000010

117719860
type: Gene
SIO_000068: ncbigene

position:12266014:-1
position: 12266014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12418091:-1
position: 12418091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12266014-12418091:-1:exon

Loxhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Loxhd1
product: lipoxygenase homology domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518241.1
SIO_010081: Loxhd1
subclass of: SO_0000673
so part of: Loxhd1
location: complement(join(12266014..12266881,12275970..12276128,12277159..12277291,12281181..12281351,12291592..12291777,12293507..12293681,12295145..12295262,12296959..12297086,12300005..12300190,12300970..12301178,12302967..12303102,12303208..12303417,12305725..12305879,12309684..12309846,12310805..12310921,12316030..12316211,12319421..12319585,12320693..12320821,12322836..12322940,12323857..12324023,12329349..12329482,12335026..12335186,12337522..12337714,12340973..12341169,12342845..12342921,12346957..12347117,12348286..12348440,12363764..12363899,12364647..12364733,12365704..12365864,12366339..12366474,12372648..12372898,12374386..12374509,12376134..12376282,12383894..12383992,12404093..12404277,12406196..12406276,12413607..12413721,12417962..12418091))
location: region:12266014-12418091:-1
so has part: feature:12417962-12418091:-1:exon
so has part: feature:12413607-12413721:-1:exon
so has part: feature:12406196-12406276:-1:exon
so has part: feature:12404093-12404277:-1:exon
so has part: feature:12383894-12383992:-1:exon
so has part: feature:12376134-12376282:-1:exon
so has part: feature:12374386-12374509:-1:exon
so has part: feature:12372648-12372898:-1:exon
so has part: feature:12366339-12366474:-1:exon
so has part: feature:12365704-12365864:-1:exon
so has part: feature:12364647-12364733:-1:exon
so has part: feature:12363764-12363899:-1:exon
so has part: feature:12348286-12348440:-1:exon
so has part: feature:12346957-12347117:-1:exon
so has part: feature:12342845-12342921:-1:exon
so has part: feature:12340973-12341169:-1:exon
so has part: feature:12337522-12337714:-1:exon
so has part: feature:12335026-12335186:-1:exon
so has part: feature:12329349-12329482:-1:exon
so has part: feature:12323857-12324023:-1:exon
so has part: feature:12322836-12322940:-1:exon
so has part: feature:12320693-12320821:-1:exon
so has part: feature:12319421-12319585:-1:exon
so has part: feature:12316030-12316211:-1:exon
so has part: feature:12310805-12310921:-1:exon
so has part: feature:12309684-12309846:-1:exon
so has part: feature:12305725-12305879:-1:exon
so has part: feature:12303208-12303417:-1:exon
so has part: feature:12302967-12303102:-1:exon
so has part: feature:12300970-12301178:-1:exon
so has part: feature:12300005-12300190:-1:exon
so has part: feature:12296959-12297086:-1:exon
so has part: feature:12295145-12295262:-1:exon
so has part: feature:12293507-12293681:-1:exon
so has part: feature:12291592-12291777:-1:exon
so has part: feature:12281181-12281351:-1:exon
so has part: feature:12277159-12277291:-1:exon
so has part: feature:12275970-12276128:-1:exon
so has part: feature:12266014-12266881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12417962-12418091:-1:exon

position:12417962:-1
position: 12417962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12413607-12413721:-1:exon

position:12413607:-1
position: 12413607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12413721:-1
position: 12413721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12406196-12406276:-1:exon

position:12406196:-1
position: 12406196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12406276:-1
position: 12406276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12404093-12404277:-1:exon

position:12404093:-1
position: 12404093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12404277:-1
position: 12404277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12383894-12383992:-1:exon

position:12383894:-1
position: 12383894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12383992:-1
position: 12383992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12376134-12376282:-1:exon

position:12376134:-1
position: 12376134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12376282:-1
position: 12376282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12374386-12374509:-1:exon

position:12374386:-1
position: 12374386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12374509:-1
position: 12374509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12372648-12372898:-1:exon

position:12372648:-1
position: 12372648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12372898:-1
position: 12372898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12366339-12366474:-1:exon

position:12366339:-1
position: 12366339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12366474:-1
position: 12366474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12365704-12365864:-1:exon

position:12365704:-1
position: 12365704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12365864:-1
position: 12365864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12364647-12364733:-1:exon

position:12364647:-1
position: 12364647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12364733:-1
position: 12364733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12363764-12363899:-1:exon

position:12363764:-1
position: 12363764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12363899:-1
position: 12363899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12348286-12348440:-1:exon

position:12348286:-1
position: 12348286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12348440:-1
position: 12348440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:12346957-12347117:-1:exon

position:12346957:-1
position: 12346957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12347117:-1
position: 12347117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:12342845-12342921:-1:exon

position:12342845:-1
position: 12342845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12342921:-1
position: 12342921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:12340973-12341169:-1:exon

position:12340973:-1
position: 12340973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12341169:-1
position: 12341169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:12337522-12337714:-1:exon

position:12337522:-1
position: 12337522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12337714:-1
position: 12337714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:12335026-12335186:-1:exon

position:12335026:-1
position: 12335026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12335186:-1
position: 12335186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:12329349-12329482:-1:exon

position:12329349:-1
position: 12329349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12329482:-1
position: 12329482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:12323857-12324023:-1:exon

position:12323857:-1
position: 12323857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12324023:-1
position: 12324023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:12322836-12322940:-1:exon

position:12322836:-1
position: 12322836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12322940:-1
position: 12322940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:12320693-12320821:-1:exon

position:12320693:-1
position: 12320693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12320821:-1
position: 12320821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:12319421-12319585:-1:exon

position:12319421:-1
position: 12319421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12319585:-1
position: 12319585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:12316030-12316211:-1:exon

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SIO_000628: feature:12310805-12310921:-1:exon

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SIO_000628: feature:12309684-12309846:-1:exon

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SIO_000628: feature:12305725-12305879:-1:exon

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SIO_000628: feature:12303208-12303417:-1:exon

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SIO_000300: 29
SIO_000628: feature:12302967-12303102:-1:exon

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SIO_000628: feature:12300970-12301178:-1:exon

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SIO_000300: 31
SIO_000628: feature:12300005-12300190:-1:exon

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SIO_000300: 32
SIO_000628: feature:12296959-12297086:-1:exon

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SIO_000300: 34
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SIO_000300: 35
SIO_000628: feature:12291592-12291777:-1:exon

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SIO_000300: 36
SIO_000628: feature:12281181-12281351:-1:exon

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SIO_000300: 37
SIO_000628: feature:12277159-12277291:-1:exon

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SIO_000300: 38
SIO_000628: feature:12275970-12276128:-1:exon

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SIO_000300: 39
SIO_000628: feature:12266014-12266881:-1:exon

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Loxhd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Loxhd1
product: lipoxygenase homology domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034518240.1
SIO_010081: Loxhd1
subclass of: SO_0000673
so part of: Loxhd1
location: complement(join(12266202..12266881,12275970..12276128,12277159..12277291,12281181..12281351,12291592..12291777,12293507..12293681,12295145..12295262,12296959..12297086,12300970..12301178,12302967..12303102,12303208..12303417,12305725..12305879,12309684..12309846,12310805..12310921,12316030..12316211,12319421..12319585,12320693..12320821,12322836..12322940,12323857..12324023,12329349..12329482,12331322..12331476,12331933..12332407,12335026..12335186,12337522..12337714,12340973..12341169,12342845..12342921,12346957..12347117,12348286..12348440,12363764..12363899,12364647..12364733,12365704..12365864,12366339..12366474,12372648..12372898,12374386..12374509,12376134..12376282,12383894..12383992,12404093..12404277,12406196..12406276,12413607..12413721,12417962..12418091))
location: region:12266202-12418091:-1
so has part: feature:12417962-12418091:-1:exon
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:12417962-12418091:-1:exon

urn:…
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urn:…
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SIO_000628: feature:12365704-12365864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12364647-12364733:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12363764-12363899:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12348286-12348440:-1:exon

urn:…
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SIO_000628: feature:12346957-12347117:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12342845-12342921:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12340973-12341169:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12337522-12337714:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12335026-12335186:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12331933-12332407:-1:exon