Arvicanthis niloticus isolate mArvNil1 chromosome 11, mArvNil1.pat.X, whole genome shotgun sequence.
type: Entry
definition: Arvicanthis niloticus isolate mArvNil1 chromosome 11, mArvNil1.pat.X, whole genome shotgun sequence.
sequence version: NC_047668.1
sequence date: 2020-05-16
sequence: sequence
division: CON
label: NC_047668.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA632612
dblink: SAMN12611849
keyword: WGS
keyword: RefSeq
source: Arvicanthis niloticus (African grass rat)
organism: Arvicanthis niloticus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022261.1.\nAssembly name: mArvNil1.pat.X\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/27. The original whole-genome shotgun project has the\naccession JAAOMG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JAN-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Freebayes v. 1.3.1;\n gEVAL manual curation v. 2020-01-16; VGP\n trio assembly pipeline v. 1.6\nAssembly Name :: mArvNil1.pat.X\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.95x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Arvicanthis niloticus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 80941235
topology: linear
so has quality: SO_0000987
location: 1..80941235
location: region:1-80941235:1
RO_0002162: 61156

NC_047668
type: RefSeq
SIO_000068: refseq

PRJNA632612
type: BioProject
SIO_000068: bioproject

SAMN12611849
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80941235:1
position: 80941235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-80941235:1:source
so part of: sequence
organism: Arvicanthis niloticus
mol type: genomic DNA
isolate: mArvNil1
specimen voucher: T564M
chromosome: 11
sex: male
tissue type: Spleen (genome), brain & testis (transcriptome)
dev stage: adult
country: USA: Santa Barbara
lat lon: 34.41938 N 119.69905 W
collection date: 06-Mar-2019
collected by: Huishi Toh

61156
type: Taxonomy
SIO_000068: taxonomy

Trim9
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 167585..288636
location: region:167585-288636:1
so has part: feature:167585-288636:1:exon
subclass of: SO_0000010

117717244
type: Gene
SIO_000068: ncbigene

position:167585:1
position: 167585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288636:1
position: 288636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167585-288636:1:exon

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 long SRA reads, 10 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034514564.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167585..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,268382..268685,271184..271346,273237..275174)
location: region:167585-275174:1
so has part: feature:167585-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-275174:1:exon

position:275174:1
position: 275174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167585-169007:1:exon

position:169007:1
position: 169007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

position:227146:1
position: 227146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227241:1
position: 227241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

position:229086:1
position: 229086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229208:1
position: 229208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

position:237892:1
position: 237892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238002:1
position: 238002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

position:239141:1
position: 239141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239294:1
position: 239294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

position:247263:1
position: 247263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247420:1
position: 247420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

position:251384:1
position: 251384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251522:1
position: 251522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268382-268685:1:exon

position:268382:1
position: 268382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268685:1
position: 268685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:271184-271346:1:exon

position:271184:1
position: 271184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271346:1
position: 271346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:273237-275174:1:exon

position:273237:1
position: 273237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034514560.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252335..252367,264511..264699,267118..267159,267559..267582,268382..268685,271184..271346,288438..288636)
location: region:167729-288636:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252335-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:288438-288636:1:exon

position:167729:1
position: 167729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252335-252367:1:exon

position:252335:1
position: 252335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252367:1
position: 252367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

position:264511:1
position: 264511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264699:1
position: 264699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

position:267118:1
position: 267118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267159:1
position: 267159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

position:267559:1
position: 267559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267582:1
position: 267582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288438-288636:1:exon

position:288438:1
position: 288438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 long SRA reads, 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034514556.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252335..252367,264511..264699,267118..267159,267559..267582,268382..268685,271184..271346,273237..275172)
location: region:167729-275172:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252335-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-275172:1:exon

position:275172:1
position: 275172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252335-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273237-275172:1:exon

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 long SRA read, 4 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034514561.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252335..252367,264511..264699,267118..267159,267559..267582,268382..268631,271184..271346,273237..275172)
location: region:167729-275172:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252335-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268631:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-275172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252335-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268631:1:exon

position:268631:1
position: 268631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273237-275172:1:exon

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 long SRA read, 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034514562.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252338..252367,264511..264699,267118..267159,267559..267582,268382..268631,271184..271346,273237..275172)
location: region:167729-275172:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252338-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268631:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-275172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252338-252367:1:exon

position:252338:1
position: 252338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268631:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273237-275172:1:exon

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 long SRA reads, 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034514565.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,268382..268631,271184..271346,273237..275172)
location: region:167729-275172:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:268382-268631:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-275172:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268382-268631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273237-275172:1:exon

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034514557.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252338..252367,264511..264699,267118..267159,267559..267582,268382..268685,271184..271346,273237..275166)
location: region:167729-275166:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252338-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-275166:1:exon

position:275166:1
position: 275166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252338-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273237-275166:1:exon

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034514558.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,264511..264699,267118..267159,267559..267582,268382..268685,271184..271346,273237..275166)
location: region:167729-275166:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-275166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273237-275166:1:exon

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034514563.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,267559..267582,268382..268685,271184..271346,273237..275166)
location: region:167729-275166:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-275166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273237-275166:1:exon

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514566.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252335..252367,253125..253465)
location: region:167729-253465:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252335-252367:1:exon
so has part: feature:253125-253465:1:exon

position:253465:1
position: 253465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252335-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253125-253465:1:exon

position:253125:1
position: 253125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Trim9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Trim9
product: tripartite motif containing 9, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514567.1
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(167729..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,253125..253465)
location: region:167729-253465:1
so has part: feature:167729-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:253125-253465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167729-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253125-253465:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X4
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEAAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENMEGLFFPAVSLNRNVQGHTWI
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252335..252367,264511..264699,267118..267159,267559..267582,268382..268685,271184..271346,288438..288455)
location: region:168186-288455:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252335-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:288438-288455:1:exon

XP_034370451.1
type: Protein
SIO_000068: ncbiprotein

position:168186:1
position: 168186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288455:1
position: 288455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252335-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:288438-288455:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X1
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEAAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENMEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252335..252367,264511..264699,267118..267159,267559..267582,268382..268685,271184..271346,273237..273299)
location: region:168186-273299:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252335-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-273299:1:exon

XP_034370447.1
type: Protein
SIO_000068: ncbiprotein

position:273299:1
position: 273299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252335-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273237-273299:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X5
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEAAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAITEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENMEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252335..252367,264511..264699,267118..267159,267559..267582,268382..268631,271184..271346,273237..273299)
location: region:168186-273299:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252335-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268631:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-273299:1:exon

XP_034370452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252335-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268631:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273237-273299:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X2
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENMEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252338..252367,264511..264699,267118..267159,267559..267582,268382..268685,271184..271346,273237..273299)
location: region:168186-273299:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252338-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-273299:1:exon

XP_034370448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252338-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273237-273299:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X6
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEAGAHETKPMKDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAITEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENMEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252338..252367,264511..264699,267118..267159,267559..267582,268382..268631,271184..271346,273237..273299)
location: region:168186-273299:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252338-252367:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268631:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-273299:1:exon

XP_034370453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252338-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:268382-268631:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:273237-273299:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X3
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEDTDSEEQTLPFPVPSERLPLRRMSPFSSTLNLQPSFPGRSYFDFRSSPHQLSLHSSLQSLNAPGCNFETQSASYSQLVDIKKLLAVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENMEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,264511..264699,267118..267159,267559..267582,268382..268685,271184..271346,273237..273299)
location: region:168186-273299:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:264511-264699:1:exon
so has part: feature:267118-267159:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-273299:1:exon

XP_034370449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264511-264699:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:267118-267159:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:273237-273299:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X7
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEVDIKKLLAVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENMEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,267559..267582,268382..268685,271184..271346,273237..273299)
location: region:168186-273299:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:267559-267582:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-273299:1:exon

XP_034370454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:267559-267582:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273237-273299:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X8
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENMEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,268382..268685,271184..271346,273237..273299)
location: region:168186-273299:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:268382-268685:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-273299:1:exon

XP_034370455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268382-268685:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273237-273299:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X9
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEVAWFAFDPGSAHSDIIFSNDNLTVTCSSYDDRVVLGKTGFSKGVHYWELTIDRYDNHPDPAFGVARIDVMKDMMLGKDDKAWAITEGGITKGATIGVLLDLNRKTLTFFVNNEQQGPIAFENMEGLFFPAVSLNRNVQVTLHTGLPVPDFYSSRASIA
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,268382..268631,271184..271346,273237..273299)
location: region:168186-273299:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:268382-268631:1:exon
so has part: feature:271184-271346:1:exon
so has part: feature:273237-273299:1:exon

XP_034370456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268382-268631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:271184-271346:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273237-273299:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X10
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEAAGAHETKPMKGR
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,252335..252367,253125..253132)
location: region:168186-253132:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:252335-252367:1:exon
so has part: feature:253125-253132:1:exon

XP_034370457.1
type: Protein
SIO_000068: ncbiprotein

position:253132:1
position: 253132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252335-252367:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253125-253132:1:exon

Trim9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Trim9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM9 isoform X11
translation: MEEMEEELKCPVCGSFYREPIILPCSHNLCQACARNILVQTPESESPQSRRASGSGVSDYDYLDLDKMSLYSEADSGYGSYGGFASAPTTPCQKSPNGVRVFPPAMPPPPTHLSPALAPVPRNSCITCPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMPVCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRTMVQQIQENSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLMEYCLEVIKENDPSGFLQISDALIRRVHLTEDQWGKGTLTPRMTTDFDLSLDNSPLLQSIHQLDFVQVKASSPVPATPILQLEECCTHNNSATLSWKQPPLSTVAADGYILELDDGSGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGR
SIO_010081: Trim9
subclass of: SO_0000673
so part of: Trim9
location: join(168186..169007,227146..227241,229086..229208,237892..238002,239141..239294,247263..247420,251384..251522,253125..253132)
location: region:168186-253132:1
so has part: feature:168186-169007:1:exon
so has part: feature:227146-227241:1:exon
so has part: feature:229086-229208:1:exon
so has part: feature:237892-238002:1:exon
so has part: feature:239141-239294:1:exon
so has part: feature:247263-247420:1:exon
so has part: feature:251384-251522:1:exon
so has part: feature:253125-253132:1:exon

XP_034370458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168186-169007:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227146-227241:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229086-229208:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:237892-238002:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239141-239294:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247263-247420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251384-251522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:253125-253132:1:exon

Pygl
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Pygl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 291589..325234
location: region:291589-325234:1
so has part: feature:291589-325234:1:exon
subclass of: SO_0000010

117717246
type: Gene
SIO_000068: ncbigene

position:291589:1
position: 291589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325234:1
position: 325234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291589-325234:1:exon

Pygl
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pygl
product: glycogen phosphorylase L
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 mRNAs, 2 long SRA reads, 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034514568.1
SIO_010081: Pygl
subclass of: SO_0000673
so part of: Pygl
location: join(291589..291925,295559..295660,298455..298533,301352..301455,306419..306550,309614..309725,310966..311048,314846..314989,315423..315515,316462..316608,316920..317083,317572..317686,318382..318483,318597..318744,318859..318917,319022..319163,320392..320599,321644..321778,322205..322271,324889..325234)
location: region:291589-325234:1
so has part: feature:291589-291925:1:exon
so has part: feature:295559-295660:1:exon
so has part: feature:298455-298533:1:exon
so has part: feature:301352-301455:1:exon
so has part: feature:306419-306550:1:exon
so has part: feature:309614-309725:1:exon
so has part: feature:310966-311048:1:exon
so has part: feature:314846-314989:1:exon
so has part: feature:315423-315515:1:exon
so has part: feature:316462-316608:1:exon
so has part: feature:316920-317083:1:exon
so has part: feature:317572-317686:1:exon
so has part: feature:318382-318483:1:exon
so has part: feature:318597-318744:1:exon
so has part: feature:318859-318917:1:exon
so has part: feature:319022-319163:1:exon
so has part: feature:320392-320599:1:exon
so has part: feature:321644-321778:1:exon
so has part: feature:322205-322271:1:exon
so has part: feature:324889-325234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291589-291925:1:exon

position:291925:1
position: 291925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295559-295660:1:exon

position:295559:1
position: 295559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295660:1
position: 295660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:298455-298533:1:exon

position:298455:1
position: 298455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298533:1
position: 298533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:301352-301455:1:exon

position:301352:1
position: 301352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301455:1
position: 301455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306419-306550:1:exon

position:306419:1
position: 306419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:306550:1
position: 306550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309614-309725:1:exon

position:309614:1
position: 309614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309725:1
position: 309725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:310966-311048:1:exon

position:310966:1
position: 310966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311048:1
position: 311048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:314846-314989:1:exon

position:314846:1
position: 314846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314989:1
position: 314989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:315423-315515:1:exon

position:315423:1
position: 315423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315515:1
position: 315515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:316462-316608:1:exon

position:316462:1
position: 316462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316608:1
position: 316608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:316920-317083:1:exon

position:316920:1
position: 316920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317083:1
position: 317083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:317572-317686:1:exon

position:317572:1
position: 317572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317686:1
position: 317686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:318382-318483:1:exon

position:318382:1
position: 318382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318483:1
position: 318483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:318597-318744:1:exon

position:318597:1
position: 318597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318744:1
position: 318744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:318859-318917:1:exon

position:318859:1
position: 318859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318917:1
position: 318917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:319022-319163:1:exon

position:319022:1
position: 319022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319163:1
position: 319163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:320392-320599:1:exon

position:320392:1
position: 320392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320599:1
position: 320599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:321644-321778:1:exon

position:321644:1
position: 321644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321778:1
position: 321778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:322205-322271:1:exon

position:322205:1
position: 322205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322271:1
position: 322271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:324889-325234:1:exon

position:324889:1
position: 324889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pygl
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pygl
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycogen phosphorylase, liver form
translation: MAKPLTDQEKRRQISIRGIVGVENVAELKKGFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYDKCPKRVYYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRHGNPWEKARPEFMLPVHFYGRVEHTQTGTKWVDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPNDFNLQDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDVIRRFKASKFGSKDGVGTVFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWEITKQTFAYTNHTVLPEALERWPVELVEKLLPRHLQIIYEINQKHLDRIVALFPKDVDRMRRMSLIEEEGGKRINMAHLCIVGCHAVNGVAKIHSDIVKTQVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLADLIAEKIGEDYVKDLSQLAKLHRFVGDDIFIREIAKVKQENKLKFSQFLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNCLHVITMYNRIKKDPKKFFVPRTVIIGGKAAPGYHMAKVIIKLITSVAEVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVDDVAALDKKGYEAKKYYEALPELKLVIDQIDNGFFSPNQPDLFKDIINMLFYHDRFKVFADYEAYVKCQEKVSQLYMNQKAWNTMVLKNIAASGKFSSDRTIKEYAKDIWNMEPSDLKISLSKESSNGVNTNGK
SIO_010081: Pygl
subclass of: SO_0000673
so part of: Pygl
location: join(291683..291925,295559..295660,298455..298533,301352..301455,306419..306550,309614..309725,310966..311048,314846..314989,315423..315515,316462..316608,316920..317083,317572..317686,318382..318483,318597..318744,318859..318917,319022..319163,320392..320599,321644..321778,322205..322271,324889..325062)
location: region:291683-325062:1
so has part: feature:291683-291925:1:exon
so has part: feature:295559-295660:1:exon
so has part: feature:298455-298533:1:exon
so has part: feature:301352-301455:1:exon
so has part: feature:306419-306550:1:exon
so has part: feature:309614-309725:1:exon
so has part: feature:310966-311048:1:exon
so has part: feature:314846-314989:1:exon
so has part: feature:315423-315515:1:exon
so has part: feature:316462-316608:1:exon
so has part: feature:316920-317083:1:exon
so has part: feature:317572-317686:1:exon
so has part: feature:318382-318483:1:exon
so has part: feature:318597-318744:1:exon
so has part: feature:318859-318917:1:exon
so has part: feature:319022-319163:1:exon
so has part: feature:320392-320599:1:exon
so has part: feature:321644-321778:1:exon
so has part: feature:322205-322271:1:exon
so has part: feature:324889-325062:1:exon

XP_034370459.1
type: Protein
SIO_000068: ncbiprotein

position:291683:1
position: 291683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325062:1
position: 325062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291683-291925:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295559-295660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:298455-298533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301352-301455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306419-306550:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309614-309725:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310966-311048:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314846-314989:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315423-315515:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:316462-316608:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:316920-317083:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317572-317686:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:318382-318483:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318597-318744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318859-318917:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:319022-319163:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:320392-320599:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:321644-321778:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:322205-322271:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:324889-325062:1:exon

Abhd12b
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Abhd12b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(326181..352815)
location: region:326181-352815:-1
so has part: feature:326181-352815:-1:exon
subclass of: SO_0000010

117717252
type: Gene
SIO_000068: ncbigene

position:326181:-1
position: 326181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352815:-1
position: 352815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326181-352815:-1:exon

Abhd12b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Abhd12b
product: abhydrolase domain containing 12B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_034514578.1
SIO_010081: Abhd12b
subclass of: SO_0000673
so part of: Abhd12b
location: complement(join(326181..326208,326320..326438,326945..327023,328391..328473,334631..334710,338076..338113,338537..338666,338780..338825,340618..340648,343001..343120,352721..352815))
location: region:326181-352815:-1
so has part: feature:352721-352815:-1:exon
so has part: feature:343001-343120:-1:exon
so has part: feature:340618-340648:-1:exon
so has part: feature:338780-338825:-1:exon
so has part: feature:338537-338666:-1:exon
so has part: feature:338076-338113:-1:exon
so has part: feature:334631-334710:-1:exon
so has part: feature:328391-328473:-1:exon
so has part: feature:326945-327023:-1:exon
so has part: feature:326320-326438:-1:exon
so has part: feature:326181-326208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352721-352815:-1:exon

position:352721:-1
position: 352721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343001-343120:-1:exon

position:343001:-1
position: 343001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343120:-1
position: 343120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:340618-340648:-1:exon

position:340618:-1
position: 340618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340648:-1
position: 340648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:338780-338825:-1:exon

position:338780:-1
position: 338780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338825:-1
position: 338825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:338537-338666:-1:exon

position:338537:-1
position: 338537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338666:-1
position: 338666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:338076-338113:-1:exon

position:338076:-1
position: 338076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338113:-1
position: 338113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:334631-334710:-1:exon

position:334631:-1
position: 334631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334710:-1
position: 334710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:328391-328473:-1:exon

position:328391:-1
position: 328391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328473:-1
position: 328473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:326945-327023:-1:exon

position:326945:-1
position: 326945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327023:-1
position: 327023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:326320-326438:-1:exon

position:326320:-1
position: 326320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326438:-1
position: 326438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:326181-326208:-1:exon

position:326208:-1
position: 326208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Abhd12b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Abhd12b
product: abhydrolase domain containing 12B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_034514577.1
SIO_010081: Abhd12b
subclass of: SO_0000673
so part of: Abhd12b
location: complement(join(326181..326208,326320..326438,326945..327023,328391..328473,334631..334710,338076..338113,338537..338666,338780..338825,340618..340648,343001..343120,344874..344976,346405..346532,352721..352815))
location: region:326181-352815:-1
so has part: feature:352721-352815:-1:exon
so has part: feature:346405-346532:-1:exon
so has part: feature:344874-344976:-1:exon
so has part: feature:343001-343120:-1:exon
so has part: feature:340618-340648:-1:exon
so has part: feature:338780-338825:-1:exon
so has part: feature:338537-338666:-1:exon
so has part: feature:338076-338113:-1:exon
so has part: feature:334631-334710:-1:exon
so has part: feature:328391-328473:-1:exon
so has part: feature:326945-327023:-1:exon
so has part: feature:326320-326438:-1:exon
so has part: feature:326181-326208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:352721-352815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346405-346532:-1:exon

position:346405:-1
position: 346405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346532:-1
position: 346532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344874-344976:-1:exon

position:344874:-1
position: 344874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344976:-1
position: 344976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:343001-343120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340618-340648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338780-338825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338537-338666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338076-338113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:334631-334710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:328391-328473:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:326945-327023:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:326320-326438:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:326181-326208:-1:exon

Abhd12b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Abhd12b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABHD12B isoform X2
translation: MEARDCDAALEPGPPACSCVASWWAMVLRNLRHTVPSCRGEEAKGKCRCWYEAALSDGNPIIIYLHGSAQHRATPVRIKLAQVLSDGGFHVLSVDYRGFGDSTGTPTEEGLTTDAICVYEWTKARSGRTPVCLWGHSLGTGVVTNAARALEAKGCPADAIILEAPFTNMWEATINYPLLKIYQKLPRCLKMLMDALKEDRIVFPNDENVKFLSSPLLILHGEDDRTVPLECGKQLYEIARSAYRNKDRVKMVVFPPGFHHNLLCESPMLIRSVRDFLSQQWA
SIO_010081: Abhd12b
subclass of: SO_0000673
so part of: Abhd12b
location: complement(join(326181..326208,326320..326438,326945..327023,328391..328473,334631..334710,338076..338113,338537..338666,338780..338825,340618..340648,343001..343120,352721..352815))
location: region:326181-352815:-1
so has part: feature:352721-352815:-1:exon
so has part: feature:343001-343120:-1:exon
so has part: feature:340618-340648:-1:exon
so has part: feature:338780-338825:-1:exon
so has part: feature:338537-338666:-1:exon
so has part: feature:338076-338113:-1:exon
so has part: feature:334631-334710:-1:exon
so has part: feature:328391-328473:-1:exon
so has part: feature:326945-327023:-1:exon
so has part: feature:326320-326438:-1:exon
so has part: feature:326181-326208:-1:exon

XP_034370469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352721-352815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343001-343120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340618-340648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:338780-338825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338537-338666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338076-338113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:334631-334710:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328391-328473:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:326945-327023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:326320-326438:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:326181-326208:-1:exon

Abhd12b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Abhd12b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABHD12B isoform X1
translation: MEARDCDAALEPGPPACSCVASWWAMVLRNLRLFPRSCSALQQKIAAEYRSFTSKSLKEHIFPPLMNMLIYFNFFKCPLLVDLKRPETKIAHTVNFFLRSEPGVLLGIWHTVPSCRGEEAKGKCRCWYEAALSDGNPIIIYLHGSAQHRATPVRIKLAQVLSDGGFHVLSVDYRGFGDSTGTPTEEGLTTDAICVYEWTKARSGRTPVCLWGHSLGTGVVTNAARALEAKGCPADAIILEAPFTNMWEATINYPLLKIYQKLPRCLKMLMDALKEDRIVFPNDENVKFLSSPLLILHGEDDRTVPLECGKQLYEIARSAYRNKDRVKMVVFPPGFHHNLLCESPMLIRSVRDFLSQQWA
SIO_010081: Abhd12b
subclass of: SO_0000673
so part of: Abhd12b
location: complement(join(326181..326208,326320..326438,326945..327023,328391..328473,334631..334710,338076..338113,338537..338666,338780..338825,340618..340648,343001..343120,344874..344976,346405..346532,352721..352815))
location: region:326181-352815:-1
so has part: feature:352721-352815:-1:exon
so has part: feature:346405-346532:-1:exon
so has part: feature:344874-344976:-1:exon
so has part: feature:343001-343120:-1:exon
so has part: feature:340618-340648:-1:exon
so has part: feature:338780-338825:-1:exon
so has part: feature:338537-338666:-1:exon
so has part: feature:338076-338113:-1:exon
so has part: feature:334631-334710:-1:exon
so has part: feature:328391-328473:-1:exon
so has part: feature:326945-327023:-1:exon
so has part: feature:326320-326438:-1:exon
so has part: feature:326181-326208:-1:exon

XP_034370468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:352721-352815:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346405-346532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344874-344976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343001-343120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340618-340648:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338780-338825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338537-338666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:338076-338113:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:334631-334710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:328391-328473:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:326945-327023:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:326320-326438:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:326181-326208:-1:exon

Nin
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Nin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 394571..494329
location: region:394571-494329:1
so has part: feature:394571-494329:1:exon
subclass of: SO_0000010

117716993
type: Gene
SIO_000068: ncbigene

position:394571:1
position: 394571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494329:1
position: 494329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394571-494329:1:exon

Nin
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nin
product: ninein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514173.1
SIO_010081: Nin
subclass of: SO_0000673
so part of: Nin
location: join(394571..394641,395020..395066,403361..403564,415991..416072,428178..428347,443452..443491,444788..444978,449200..449346,449946..450113,450571..450707,451084..451224,451495..451669,454529..454639,455020..455109,457718..457856,459171..459292,460922..461427,462293..464413,465621..465746,465846..465915,467815..468027,471229..471342,474616..474738,475411..475524,476292..476438,477790..477969,479234..479383,480767..480868,485142..485339,486896..487097)
location: region:394571-487097:1
so has part: feature:394571-394641:1:exon
so has part: feature:395020-395066:1:exon
so has part: feature:403361-403564:1:exon
so has part: feature:415991-416072:1:exon
so has part: feature:428178-428347:1:exon
so has part: feature:443452-443491:1:exon
so has part: feature:444788-444978:1:exon
so has part: feature:449200-449346:1:exon
so has part: feature:449946-450113:1:exon
so has part: feature:450571-450707:1:exon
so has part: feature:451084-451224:1:exon
so has part: feature:451495-451669:1:exon
so has part: feature:454529-454639:1:exon
so has part: feature:455020-455109:1:exon
so has part: feature:457718-457856:1:exon
so has part: feature:459171-459292:1:exon
so has part: feature:460922-461427:1:exon
so has part: feature:462293-464413:1:exon
so has part: feature:465621-465746:1:exon
so has part: feature:465846-465915:1:exon
so has part: feature:467815-468027:1:exon
so has part: feature:471229-471342:1:exon
so has part: feature:474616-474738:1:exon
so has part: feature:475411-475524:1:exon
so has part: feature:476292-476438:1:exon
so has part: feature:477790-477969:1:exon
so has part: feature:479234-479383:1:exon
so has part: feature:480767-480868:1:exon
so has part: feature:485142-485339:1:exon
so has part: feature:486896-487097:1:exon

position:487097:1
position: 487097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394571-394641:1:exon

position:394641:1
position: 394641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:395020-395066:1:exon

position:395020:1
position: 395020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395066:1
position: 395066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403361-403564:1:exon

position:403361:1
position: 403361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403564:1
position: 403564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:415991-416072:1:exon

position:415991:1
position: 415991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416072:1
position: 416072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:428178-428347:1:exon

position:428178:1
position: 428178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428347:1
position: 428347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:443452-443491:1:exon

position:443452:1
position: 443452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443491:1
position: 443491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:444788-444978:1:exon

position:444788:1
position: 444788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444978:1
position: 444978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:449200-449346:1:exon

position:449200:1
position: 449200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449346:1
position: 449346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:449946-450113:1:exon

position:449946:1
position: 449946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450113:1
position: 450113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:450571-450707:1:exon

position:450571:1
position: 450571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450707:1
position: 450707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:451084-451224:1:exon

position:451084:1
position: 451084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451224:1
position: 451224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:451495-451669:1:exon

position:451495:1
position: 451495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451669:1
position: 451669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:454529-454639:1:exon

position:454529:1
position: 454529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454639:1
position: 454639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:455020-455109:1:exon

position:455020:1
position: 455020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455109:1
position: 455109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:457718-457856:1:exon

position:457718:1
position: 457718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457856:1
position: 457856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:459171-459292:1:exon

position:459171:1
position: 459171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459292:1
position: 459292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:460922-461427:1:exon

position:460922:1
position: 460922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461427:1
position: 461427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:462293-464413:1:exon

position:462293:1
position: 462293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464413:1
position: 464413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:465621-465746:1:exon

position:465621:1
position: 465621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465746:1
position: 465746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:465846-465915:1:exon

position:465846:1
position: 465846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465915:1
position: 465915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:467815-468027:1:exon

position:467815:1
position: 467815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468027:1
position: 468027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:471229-471342:1:exon

position:471229:1
position: 471229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471342:1
position: 471342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:474616-474738:1:exon

position:474616:1
position: 474616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474738:1
position: 474738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:475411-475524:1:exon

position:475411:1
position: 475411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475524:1
position: 475524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:476292-476438:1:exon

position:476292:1
position: 476292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476438:1
position: 476438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:477790-477969:1:exon

position:477790:1
position: 477790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477969:1
position: 477969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:479234-479383:1:exon

position:479234:1
position: 479234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479383:1
position: 479383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:480767-480868:1:exon

position:480767:1
position: 480767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480868:1
position: 480868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:485142-485339:1:exon

position:485142:1
position: 485142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485339:1
position: 485339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:486896-487097:1:exon

position:486896:1
position: 486896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nin
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nin
product: ninein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514172.1
SIO_010081: Nin
subclass of: SO_0000673
so part of: Nin
location: join(395022..395066,403361..403564,415991..416072,428178..428347,443452..443491,444788..444978,449200..449346,449946..450113,450571..450707,451084..451224,451495..451669,454529..454639,455020..455109,457718..457856,459171..459292,460922..461427,462293..464413,465621..465746,465846..465915,467815..468027,471229..471342,474616..474738,475411..475524,476292..476438,477790..477969,479234..479383,480767..480868,485142..485339,488629..488742,491336..494329)
location: region:395022-494329:1
so has part: feature:395022-395066:1:exon
so has part: feature:403361-403564:1:exon
so has part: feature:415991-416072:1:exon
so has part: feature:428178-428347:1:exon
so has part: feature:443452-443491:1:exon
so has part: feature:444788-444978:1:exon
so has part: feature:449200-449346:1:exon
so has part: feature:449946-450113:1:exon
so has part: feature:450571-450707:1:exon
so has part: feature:451084-451224:1:exon
so has part: feature:451495-451669:1:exon
so has part: feature:454529-454639:1:exon
so has part: feature:455020-455109:1:exon
so has part: feature:457718-457856:1:exon
so has part: feature:459171-459292:1:exon
so has part: feature:460922-461427:1:exon
so has part: feature:462293-464413:1:exon
so has part: feature:465621-465746:1:exon
so has part: feature:465846-465915:1:exon
so has part: feature:467815-468027:1:exon
so has part: feature:471229-471342:1:exon
so has part: feature:474616-474738:1:exon
so has part: feature:475411-475524:1:exon
so has part: feature:476292-476438:1:exon
so has part: feature:477790-477969:1:exon
so has part: feature:479234-479383:1:exon
so has part: feature:480767-480868:1:exon
so has part: feature:485142-485339:1:exon
so has part: feature:488629-488742:1:exon
so has part: feature:491336-494329:1:exon

position:395022:1
position: 395022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395022-395066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403361-403564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:415991-416072:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428178-428347:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443452-443491:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444788-444978:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449200-449346:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449946-450113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:450571-450707:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451084-451224:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451495-451669:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454529-454639:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:455020-455109:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:457718-457856:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459171-459292:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:460922-461427:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:462293-464413:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:465621-465746:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:465846-465915:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:467815-468027:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:471229-471342:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:474616-474738:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:475411-475524:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:476292-476438:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:477790-477969:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:479234-479383:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:480767-480868:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:485142-485339:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:488629-488742:1:exon

position:488629:1
position: 488629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488742:1
position: 488742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:491336-494329:1:exon

position:491336:1
position: 491336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nin
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninein isoform X1
translation: MDEVEQDQHEARLKELFDSFDTLGTGSLGQEELTDLCHVLCLEDVGPVLQQTLLQDNLLGRVHFDQFKEALILILSRTLSSEEHFEESDCSPEAQPKYVRGGKRYGRRSLPEFQESGEEFTEVTVLEPLEEEARPSHIPDGDCSEHWKTQRSEEYEAEGQLRFWNPDDLNASHGGSCPPPDWIEEKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGAMLEEVFLSLDPDGTMSLEDFFYGLFKTGKSLTPSASTPYRQLKRHLSMQSFDESGRRTTTSSAMTSTIGFRVFSCLDNGMGQASVERILDAWQEEGIENSQEILKALDFSLDGNVNLTELTLALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYESLTNKLQRNLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNSLSEELEGHSGGIEPNQGPGSEECNPLNMSIEAELVIEQMKEQHHRDLCHLRLELEDKVRHYEKQLADTRVACEKEQVAMKQKYEQGVHTLEKQISDLRSEIADLQGQAAVLREAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRQEHERELKARLQQAEESFLQEREGLAQAAAWTEEKVRDLTRDLEQSYQEQLRSLMEKHALEKEELKKELSECHQRELQEGREKMETECNRRVSQIEAQFQADCEKVTEHCEQTLQTLEGRYRQELKDLLDQHLEEKSQWEFEKDELAQECTEAQEQLKEVLQREKATSLAMNQEQEMLEKTYKEHLNILNMEREKLLQDLKDLRNASESQHSLLSDQIIELKRSQERELREQGQVLCQTGVSEQLASQQLERLQVEHEQEKQEMMGKLAVLESAHRMNCERTDQEKAEMSAEIRRLRNTVKDMQQAASLLVLQGGCQAIAGEEAEGNGAMSLLQQGEQLLEENGDVLISLQRAHERAVKENAKMAMEISRLQQRLKKLEPGSVISSCLEEQTSEISGSSREQAEPIMKQGTTTKHFLSDLGDHEARDLGSTGTSSVQRQECKTEESEASLECFSELENSEDTRTGSCDLKSQIIQLQEQLTVLRADCERASERKQDLLFDISVLKKKLKMLERLPEASSRYKVLYEDAARENTCLQEELRLIETRYEESLDSNKELTAEVYRLQDEMKKMEEVMETFISLEKSYDEVKLENEELSALVLRLQGKMEKVLERATLQGDSYSLWGAPSENLEVTSDEKMFELHQTPEECTPKVMSMHHVIEECRQEAQCCEQGSTRLLARIKAHEIAWFRRTIQTHQEKPSVQNRVVLEGNDALLGLQDTHLQHEAMIAELEVEKQKLQELTRSLRERVTTLVKQKDTPSQGEKEEELKAMMHDLQITCSEMQQKVELLRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMLSQKDEPGTCTSEKWEQENASLKGELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDFQQKMSSILSYNEKLLKEKEVLSEELKSCADKLAESSLLEHRIATMKQEQEAWEEQSQSLKSQLAVSQEKVQNLEDILQNVNLQMAQIESDLQVTQQEKEALKQEVMTLHRQLQNAIDKDWASETAPHLSGFQSQQKGLSWDKLDHLMNEEPELLCQESKRLQTVVQNTQADLTHSWEKVCQLESNLLPTKHQKQLNQSCTVKPIEQEKLTLKRECEQSQKERPPTSRKVSQMNSLDRELETVHLENEGLKKKQVRLDEKLMEMQPLRSTVTHSPSSHWDLQLLQQQACPMVSREQFLQLQQQLLQAEK…
SIO_010081: Nin
subclass of: SO_0000673
so part of: Nin
location: join(403382..403564,415991..416072,428178..428347,443452..443491,444788..444978,449200..449346,449946..450113,450571..450707,451084..451224,451495..451669,454529..454639,455020..455109,457718..457856,459171..459292,460922..461427,462293..464413,465621..465746,465846..465915,467815..468027,471229..471342,474616..474738,475411..475524,476292..476438,477790..477969,479234..479383,480767..480868,485142..485339,488629..488742,491336..491545)
location: region:403382-491545:1
so has part: feature:403382-403564:1:exon
so has part: feature:415991-416072:1:exon
so has part: feature:428178-428347:1:exon
so has part: feature:443452-443491:1:exon
so has part: feature:444788-444978:1:exon
so has part: feature:449200-449346:1:exon
so has part: feature:449946-450113:1:exon
so has part: feature:450571-450707:1:exon
so has part: feature:451084-451224:1:exon
so has part: feature:451495-451669:1:exon
so has part: feature:454529-454639:1:exon
so has part: feature:455020-455109:1:exon
so has part: feature:457718-457856:1:exon
so has part: feature:459171-459292:1:exon
so has part: feature:460922-461427:1:exon
so has part: feature:462293-464413:1:exon
so has part: feature:465621-465746:1:exon
so has part: feature:465846-465915:1:exon
so has part: feature:467815-468027:1:exon
so has part: feature:471229-471342:1:exon
so has part: feature:474616-474738:1:exon
so has part: feature:475411-475524:1:exon
so has part: feature:476292-476438:1:exon
so has part: feature:477790-477969:1:exon
so has part: feature:479234-479383:1:exon
so has part: feature:480767-480868:1:exon
so has part: feature:485142-485339:1:exon
so has part: feature:488629-488742:1:exon
so has part: feature:491336-491545:1:exon

XP_034370063.1
type: Protein
SIO_000068: ncbiprotein

position:403382:1
position: 403382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491545:1
position: 491545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403382-403564:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415991-416072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428178-428347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443452-443491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444788-444978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449200-449346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449946-450113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450571-450707:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451084-451224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451495-451669:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:454529-454639:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455020-455109:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:457718-457856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459171-459292:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460922-461427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:462293-464413:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:465621-465746:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:465846-465915:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:467815-468027:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:471229-471342:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:474616-474738:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:475411-475524:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:476292-476438:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:477790-477969:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:479234-479383:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:480767-480868:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:485142-485339:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:488629-488742:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:491336-491545:1:exon

Nin
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nin
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninein isoform X2
translation: MDEVEQDQHEARLKELFDSFDTLGTGSLGQEELTDLCHVLCLEDVGPVLQQTLLQDNLLGRVHFDQFKEALILILSRTLSSEEHFEESDCSPEAQPKYVRGGKRYGRRSLPEFQESGEEFTEVTVLEPLEEEARPSHIPDGDCSEHWKTQRSEEYEAEGQLRFWNPDDLNASHGGSCPPPDWIEEKLQEVCEDLGITRDGHLNRKKLVSICEQYGLQNVDGAMLEEVFLSLDPDGTMSLEDFFYGLFKTGKSLTPSASTPYRQLKRHLSMQSFDESGRRTTTSSAMTSTIGFRVFSCLDNGMGQASVERILDAWQEEGIENSQEILKALDFSLDGNVNLTELTLALENELLVTKNGIHQAALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNLRKLDEEYKERIAALKNELRQEREQILQQVGKQRVELEQEIEKAKTEENYIRDRLALSLKENNRLENELLENAEKLAEYESLTNKLQRNLENVLAEKFGDLDPSSAEFFLQEERLAQMRNEYEQQCRLLQDQVDELQSELEEYQAQGRVLRLPLKNSLSEELEGHSGGIEPNQGPGSEECNPLNMSIEAELVIEQMKEQHHRDLCHLRLELEDKVRHYEKQLADTRVACEKEQVAMKQKYEQGVHTLEKQISDLRSEIADLQGQAAVLREAHHKASCRHEEEKKQLQMVFDEEKTQLQEELRQEHERELKARLQQAEESFLQEREGLAQAAAWTEEKVRDLTRDLEQSYQEQLRSLMEKHALEKEELKKELSECHQRELQEGREKMETECNRRVSQIEAQFQADCEKVTEHCEQTLQTLEGRYRQELKDLLDQHLEEKSQWEFEKDELAQECTEAQEQLKEVLQREKATSLAMNQEQEMLEKTYKEHLNILNMEREKLLQDLKDLRNASESQHSLLSDQIIELKRSQERELREQGQVLCQTGVSEQLASQQLERLQVEHEQEKQEMMGKLAVLESAHRMNCERTDQEKAEMSAEIRRLRNTVKDMQQAASLLVLQGGCQAIAGEEAEGNGAMSLLQQGEQLLEENGDVLISLQRAHERAVKENAKMAMEISRLQQRLKKLEPGSVISSCLEEQTSEISGSSREQAEPIMKQGTTTKHFLSDLGDHEARDLGSTGTSSVQRQECKTEESEASLECFSELENSEDTRTGSCDLKSQIIQLQEQLTVLRADCERASERKQDLLFDISVLKKKLKMLERLPEASSRYKVLYEDAARENTCLQEELRLIETRYEESLDSNKELTAEVYRLQDEMKKMEEVMETFISLEKSYDEVKLENEELSALVLRLQGKMEKVLERATLQGDSYSLWGAPSENLEVTSDEKMFELHQTPEECTPKVMSMHHVIEECRQEAQCCEQGSTRLLARIKAHEIAWFRRTIQTHQEKPSVQNRVVLEGNDALLGLQDTHLQHEAMIAELEVEKQKLQELTRSLRERVTTLVKQKDTPSQGEKEEELKAMMHDLQITCSEMQQKVELLRYESEKLQEENSILRNEITTLNEEDSISNLKLEELNGSQEELWQKIETIEQEKASIQKMVEKLKKQVSDLKLKNQQLDSENIELSQKNSQNKEELKTLNQRLAEMLSQKDEPGTCTSEKWEQENASLKGELDRYKVQTSTLVSSLEAELSEVKLQTHIVEQENLLLKDELERLKQLHRCPDLSDFQQKMSSILSYNEKLLKEKEVLSEELKSCADKLAESSLLEHRIATMKQEQEAWEEQSQSLKSQLAVSQEKVQNLEDILQNVNLQMAQIESDLQVTQQEKEALKQEVMTLHRQLQNAIDKDWASETAPHLSGFQSQQKGLSWDKLDHLMNEEPELLCQESKRLQTVVQNTQADLTHSWEKVCQLESNLLPTKHQKQLNQSCTVKPIEQEKLTLKRECEQSQKERPPTSRKVSQMNSLDRELETVHLENEGLKKKQVRLDEKLMEMQPLRSTVTHSPSSHWDLQLLQQQACPMVSREQFLQLQQQLLQAEK…
SIO_010081: Nin
subclass of: SO_0000673
so part of: Nin
location: join(403382..403564,415991..416072,428178..428347,443452..443491,444788..444978,449200..449346,449946..450113,450571..450707,451084..451224,451495..451669,454529..454639,455020..455109,457718..457856,459171..459292,460922..461427,462293..464413,465621..465746,465846..465915,467815..468027,471229..471342,474616..474738,475411..475524,476292..476438,477790..477969,479234..479383,480767..480868,485142..485339,486896..486958)
location: region:403382-486958:1
so has part: feature:403382-403564:1:exon
so has part: feature:415991-416072:1:exon
so has part: feature:428178-428347:1:exon
so has part: feature:443452-443491:1:exon
so has part: feature:444788-444978:1:exon
so has part: feature:449200-449346:1:exon
so has part: feature:449946-450113:1:exon
so has part: feature:450571-450707:1:exon
so has part: feature:451084-451224:1:exon
so has part: feature:451495-451669:1:exon
so has part: feature:454529-454639:1:exon
so has part: feature:455020-455109:1:exon
so has part: feature:457718-457856:1:exon
so has part: feature:459171-459292:1:exon
so has part: feature:460922-461427:1:exon
so has part: feature:462293-464413:1:exon
so has part: feature:465621-465746:1:exon
so has part: feature:465846-465915:1:exon
so has part: feature:467815-468027:1:exon
so has part: feature:471229-471342:1:exon
so has part: feature:474616-474738:1:exon
so has part: feature:475411-475524:1:exon
so has part: feature:476292-476438:1:exon
so has part: feature:477790-477969:1:exon
so has part: feature:479234-479383:1:exon
so has part: feature:480767-480868:1:exon
so has part: feature:485142-485339:1:exon
so has part: feature:486896-486958:1:exon

XP_034370064.1
type: Protein
SIO_000068: ncbiprotein

position:486958:1
position: 486958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403382-403564:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415991-416072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428178-428347:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:443452-443491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:444788-444978:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449200-449346:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449946-450113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:450571-450707:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451084-451224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451495-451669:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:454529-454639:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:455020-455109:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:457718-457856:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459171-459292:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:460922-461427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:462293-464413:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:465621-465746:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:465846-465915:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:467815-468027:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:471229-471342:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:474616-474738:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:475411-475524:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:476292-476438:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:477790-477969:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:479234-479383:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:480767-480868:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:485142-485339:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:486896-486958:1:exon

Sav1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Sav1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 518270..537030
location: region:518270-537030:1
so has part: feature:518270-537030:1:exon
subclass of: SO_0000010

117716900
type: Gene
SIO_000068: ncbigene

position:518270:1
position: 518270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537030:1
position: 537030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518270-537030:1:exon

Sav1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sav1
product: salvador family WW domain containing protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513999.1
SIO_010081: Sav1
subclass of: SO_0000673
so part of: Sav1
location: join(518270..518473,520186..520632,527068..527338,532900..533043,535843..537030)
location: region:518270-537030:1
so has part: feature:518270-518473:1:exon
so has part: feature:520186-520632:1:exon
so has part: feature:527068-527338:1:exon
so has part: feature:532900-533043:1:exon
so has part: feature:535843-537030:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518270-518473:1:exon

position:518473:1
position: 518473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520186-520632:1:exon

position:520186:1
position: 520186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520632:1
position: 520632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:527068-527338:1:exon

position:527068:1
position: 527068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527338:1
position: 527338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:532900-533043:1:exon

position:532900:1
position: 532900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533043:1
position: 533043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:535843-537030:1:exon

position:535843:1
position: 535843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sav1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sav1
product: salvador family WW domain containing protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034514000.1
SIO_010081: Sav1
subclass of: SO_0000673
so part of: Sav1
location: join(518370..518473,520252..520632,527068..527338,532900..533043,535843..537030)
location: region:518370-537030:1
so has part: feature:518370-518473:1:exon
so has part: feature:520252-520632:1:exon
so has part: feature:527068-527338:1:exon
so has part: feature:532900-533043:1:exon
so has part: feature:535843-537030:1:exon

position:518370:1
position: 518370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518370-518473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520252-520632:1:exon

position:520252:1
position: 520252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:527068-527338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532900-533043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535843-537030:1:exon

Sav1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sav1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein salvador homolog 1 isoform X1
translation: MLSRKKTKNEVSKPAEVQGKYVKKETSPLLRNLMPSFIRHGPTIPRRTDLCLPDSSASAFSASGDGVISRNQSFLRTPIQRTPHEVMRRESNRLSAPSSYLVRSLADVPREYGSSQSFLTEVNFAVENGDSGSRYFYSDNFFDSQRRRPLGDRAQEDYRYYEYNHDLFQRMPQNQGRHTSGIGRVTATSLGNLTNHGSEDLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLEREGLPPGWERVESSEFGTYYVDHTNKRAQYRHPCAPSVPRYDQPPPITYQPQQTERNQSLLVPANPYHTAEIPDWLQVYARAPVKYDHILKWELFQLADLDTYQGMLKLLFMKELEQIVKLYEAYRQALLTELENRKQRQQWYAQQHGKKFLS
SIO_010081: Sav1
subclass of: SO_0000673
so part of: Sav1
location: join(518380..518473,520186..520632,527068..527338,532900..533043,535843..536050)
location: region:518380-536050:1
so has part: feature:518380-518473:1:exon
so has part: feature:520186-520632:1:exon
so has part: feature:527068-527338:1:exon
so has part: feature:532900-533043:1:exon
so has part: feature:535843-536050:1:exon

XP_034369890.1
type: Protein
SIO_000068: ncbiprotein

position:518380:1
position: 518380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536050:1
position: 536050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518380-518473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520186-520632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527068-527338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532900-533043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535843-536050:1:exon

Sav1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sav1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein salvador homolog 1 isoform X2
translation: MLSRKKTKNEVSKPAEVQGKYVKKETSPLLRNSSASAFSASGDGVISRNQSFLRTPIQRTPHEVMRRESNRLSAPSSYLVRSLADVPREYGSSQSFLTEVNFAVENGDSGSRYFYSDNFFDSQRRRPLGDRAQEDYRYYEYNHDLFQRMPQNQGRHTSGIGRVTATSLGNLTNHGSEDLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLEREGLPPGWERVESSEFGTYYVDHTNKRAQYRHPCAPSVPRYDQPPPITYQPQQTERNQSLLVPANPYHTAEIPDWLQVYARAPVKYDHILKWELFQLADLDTYQGMLKLLFMKELEQIVKLYEAYRQALLTELENRKQRQQWYAQQHGKKFLS
SIO_010081: Sav1
subclass of: SO_0000673
so part of: Sav1
location: join(518380..518473,520252..520632,527068..527338,532900..533043,535843..536050)
location: region:518380-536050:1
so has part: feature:518380-518473:1:exon
so has part: feature:520252-520632:1:exon
so has part: feature:527068-527338:1:exon
so has part: feature:532900-533043:1:exon
so has part: feature:535843-536050:1:exon

XP_034369891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518380-518473:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520252-520632:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:527068-527338:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532900-533043:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:535843-536050:1:exon

LOC117716939
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(530260..532577)
location: region:530260-532577:-1
so has part: feature:530260-532577:-1:exon

117716939
type: Gene
SIO_000068: ncbigene

position:530260:-1
position: 530260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532577:-1
position: 532577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530260-532577:-1:exon

LOC117716939
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716939
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716939
subclass of: SO_0000673
so part of: LOC117716939
location: complement(530260..530795)
location: region:530260-530795:-1
so has part: feature:530260-530795:-1:exon

position:530795:-1
position: 530795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530260-530795:-1:exon

LOC117716939
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716939
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716939
subclass of: SO_0000673
so part of: LOC117716939
location: complement(531167..531838)
location: region:531167-531838:-1
so has part: feature:531167-531838:-1:exon

position:531167:-1
position: 531167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531838:-1
position: 531838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531167-531838:-1:exon

LOC117716939
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716939
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716939
subclass of: SO_0000673
so part of: LOC117716939
location: complement(531870..532160)
location: region:531870-532160:-1
so has part: feature:531870-532160:-1:exon

position:531870:-1
position: 531870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532160:-1
position: 532160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531870-532160:-1:exon

LOC117716939
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716939
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716939
subclass of: SO_0000673
so part of: LOC117716939
location: complement(532446..532577)
location: region:532446-532577:-1
so has part: feature:532446-532577:-1:exon

position:532446:-1
position: 532446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532446-532577:-1:exon

Atl1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Atl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(537568..614147)
location: region:537568-614147:-1
so has part: feature:537568-614147:-1:exon
subclass of: SO_0000010

117716902
type: Gene
SIO_000068: ncbigene

position:537568:-1
position: 537568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614147:-1
position: 614147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537568-614147:-1:exon

Atl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Atl1
product: atlastin GTPase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 long SRA reads, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514005.1
SIO_010081: Atl1
subclass of: SO_0000673
so part of: Atl1
location: complement(join(537568..538790,542472..542903,545832..545903,546374..546430,547334..547461,554002..554140,555254..555346,564136..564192,566240..566290,568609..568713,569165..569299,572520..572767,597371..597557,613673..614147))
location: region:537568-614147:-1
so has part: feature:613673-614147:-1:exon
so has part: feature:597371-597557:-1:exon
so has part: feature:572520-572767:-1:exon
so has part: feature:569165-569299:-1:exon
so has part: feature:568609-568713:-1:exon
so has part: feature:566240-566290:-1:exon
so has part: feature:564136-564192:-1:exon
so has part: feature:555254-555346:-1:exon
so has part: feature:554002-554140:-1:exon
so has part: feature:547334-547461:-1:exon
so has part: feature:546374-546430:-1:exon
so has part: feature:545832-545903:-1:exon
so has part: feature:542472-542903:-1:exon
so has part: feature:537568-538790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613673-614147:-1:exon

position:613673:-1
position: 613673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:597371-597557:-1:exon

position:597371:-1
position: 597371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597557:-1
position: 597557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:572520-572767:-1:exon

position:572520:-1
position: 572520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572767:-1
position: 572767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:569165-569299:-1:exon

position:569165:-1
position: 569165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569299:-1
position: 569299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:568609-568713:-1:exon

position:568609:-1
position: 568609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568713:-1
position: 568713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:566240-566290:-1:exon

position:566240:-1
position: 566240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:566290:-1
position: 566290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:564136-564192:-1:exon

position:564136:-1
position: 564136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564192:-1
position: 564192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:555254-555346:-1:exon

position:555254:-1
position: 555254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555346:-1
position: 555346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:554002-554140:-1:exon

position:554002:-1
position: 554002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554140:-1
position: 554140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:547334-547461:-1:exon

position:547334:-1
position: 547334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547461:-1
position: 547461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:546374-546430:-1:exon

position:546374:-1
position: 546374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546430:-1
position: 546430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:545832-545903:-1:exon

position:545832:-1
position: 545832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545903:-1
position: 545903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:542472-542903:-1:exon

position:542472:-1
position: 542472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542903:-1
position: 542903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:537568-538790:-1:exon

position:538790:-1
position: 538790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Atl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Atl1
product: atlastin GTPase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 mRNAs, 1 long SRA read, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034514004.1
SIO_010081: Atl1
subclass of: SO_0000673
so part of: Atl1
location: complement(join(537982..538790,541382..541396,542472..542903,545832..545903,546374..546430,547334..547461,554002..554140,555254..555346,564136..564192,566240..566290,568609..568713,569165..569299,572520..572767,597371..597557,613673..614147))
location: region:537982-614147:-1
so has part: feature:613673-614147:-1:exon
so has part: feature:597371-597557:-1:exon
so has part: feature:572520-572767:-1:exon
so has part: feature:569165-569299:-1:exon
so has part: feature:568609-568713:-1:exon
so has part: feature:566240-566290:-1:exon
so has part: feature:564136-564192:-1:exon
so has part: feature:555254-555346:-1:exon
so has part: feature:554002-554140:-1:exon
so has part: feature:547334-547461:-1:exon
so has part: feature:546374-546430:-1:exon
so has part: feature:545832-545903:-1:exon
so has part: feature:542472-542903:-1:exon
so has part: feature:541382-541396:-1:exon
so has part: feature:537982-538790:-1:exon

position:537982:-1
position: 537982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613673-614147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597371-597557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572520-572767:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:569165-569299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:568609-568713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:566240-566290:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564136-564192:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555254-555346:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:554002-554140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:547334-547461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:546374-546430:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:545832-545903:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:542472-542903:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:541382-541396:-1:exon

position:541382:-1
position: 541382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541396:-1
position: 541396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:537982-538790:-1:exon

Atl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Atl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin-1 isoform X2
translation: MAKSRRDRNSWGGFSEKSSEWSSEEEEPVRKAGPVQVLIVKDDHSFELDEAALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEVFLINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQAKHLQLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQALYKLYSAAATHRHLYHQAFPAPKSEPTEQLEKKKI
SIO_010081: Atl1
subclass of: SO_0000673
so part of: Atl1
location: complement(join(538680..538790,542472..542903,545832..545903,546374..546430,547334..547461,554002..554140,555254..555346,564136..564192,566240..566290,568609..568713,569165..569299,572520..572767,597371..597404))
location: region:538680-597404:-1
so has part: feature:597371-597404:-1:exon
so has part: feature:572520-572767:-1:exon
so has part: feature:569165-569299:-1:exon
so has part: feature:568609-568713:-1:exon
so has part: feature:566240-566290:-1:exon
so has part: feature:564136-564192:-1:exon
so has part: feature:555254-555346:-1:exon
so has part: feature:554002-554140:-1:exon
so has part: feature:547334-547461:-1:exon
so has part: feature:546374-546430:-1:exon
so has part: feature:545832-545903:-1:exon
so has part: feature:542472-542903:-1:exon
so has part: feature:538680-538790:-1:exon

XP_034369896.1
type: Protein
SIO_000068: ncbiprotein

position:538680:-1
position: 538680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597404:-1
position: 597404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:597371-597404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572520-572767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:569165-569299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568609-568713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566240-566290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:564136-564192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555254-555346:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554002-554140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547334-547461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546374-546430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545832-545903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:542472-542903:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:538680-538790:-1:exon

Atl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Atl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: atlastin-1 isoform X1
translation: MAKSRRDRNSWGGFSEKSSEWSSEEEEPVRKAGPVQVLIVKDDHSFELDEAALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEVFLINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQAKHLQLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPATLFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGSTNEALYKLYSAAATHRHLYHQAFPAPKSEPTEQLEKKKI
SIO_010081: Atl1
subclass of: SO_0000673
so part of: Atl1
location: complement(join(538680..538790,541382..541396,542472..542903,545832..545903,546374..546430,547334..547461,554002..554140,555254..555346,564136..564192,566240..566290,568609..568713,569165..569299,572520..572767,597371..597404))
location: region:538680-597404:-1
so has part: feature:597371-597404:-1:exon
so has part: feature:572520-572767:-1:exon
so has part: feature:569165-569299:-1:exon
so has part: feature:568609-568713:-1:exon
so has part: feature:566240-566290:-1:exon
so has part: feature:564136-564192:-1:exon
so has part: feature:555254-555346:-1:exon
so has part: feature:554002-554140:-1:exon
so has part: feature:547334-547461:-1:exon
so has part: feature:546374-546430:-1:exon
so has part: feature:545832-545903:-1:exon
so has part: feature:542472-542903:-1:exon
so has part: feature:541382-541396:-1:exon
so has part: feature:538680-538790:-1:exon

XP_034369895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:597371-597404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:572520-572767:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:569165-569299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:568609-568713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:566240-566290:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:564136-564192:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555254-555346:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:554002-554140:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:547334-547461:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:546374-546430:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:545832-545903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:542472-542903:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:541382-541396:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:538680-538790:-1:exon

Map4k5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Map4k5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 613866..706555
location: region:613866-706555:1
so has part: feature:613866-706555:1:exon
subclass of: SO_0000010

117716901
type: Gene
SIO_000068: ncbigene

position:613866:1
position: 613866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706555:1
position: 706555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613866-706555:1:exon

Map4k5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Map4k5
product: mitogen-activated protein kinase kinase kinase kinase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 3 long SRA reads, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514002.1
SIO_010081: Map4k5
subclass of: SO_0000673
so part of: Map4k5
location: join(613866..614371,632922..632979,652340..652430,652878..652942,655632..655687,657376..657423,657513..657555,658634..658706,662648..662779,664117..664179,665890..665971,666854..666970,671046..671124,675465..675523,676624..676691,679908..679950,680461..680614,681604..681701,682205..682246,683288..683372,684484..684563,684942..685002,688873..688875,689167..689281,689602..689660,691282..691385,691739..691916,696465..696533,697966..698058,700896..700966,703012..703067,704941..706555)
location: region:613866-706555:1
so has part: feature:613866-614371:1:exon
so has part: feature:632922-632979:1:exon
so has part: feature:652340-652430:1:exon
so has part: feature:652878-652942:1:exon
so has part: feature:655632-655687:1:exon
so has part: feature:657376-657423:1:exon
so has part: feature:657513-657555:1:exon
so has part: feature:658634-658706:1:exon
so has part: feature:662648-662779:1:exon
so has part: feature:664117-664179:1:exon
so has part: feature:665890-665971:1:exon
so has part: feature:666854-666970:1:exon
so has part: feature:671046-671124:1:exon
so has part: feature:675465-675523:1:exon
so has part: feature:676624-676691:1:exon
so has part: feature:679908-679950:1:exon
so has part: feature:680461-680614:1:exon
so has part: feature:681604-681701:1:exon
so has part: feature:682205-682246:1:exon
so has part: feature:683288-683372:1:exon
so has part: feature:684484-684563:1:exon
so has part: feature:684942-685002:1:exon
so has part: feature:688873-688875:1:exon
so has part: feature:689167-689281:1:exon
so has part: feature:689602-689660:1:exon
so has part: feature:691282-691385:1:exon
so has part: feature:691739-691916:1:exon
so has part: feature:696465-696533:1:exon
so has part: feature:697966-698058:1:exon
so has part: feature:700896-700966:1:exon
so has part: feature:703012-703067:1:exon
so has part: feature:704941-706555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:613866-614371:1:exon

position:614371:1
position: 614371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:632922-632979:1:exon

position:632922:1
position: 632922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632979:1
position: 632979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652340-652430:1:exon

position:652340:1
position: 652340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652430:1
position: 652430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:652878-652942:1:exon

position:652878:1
position: 652878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652942:1
position: 652942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:655632-655687:1:exon

position:655632:1
position: 655632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655687:1
position: 655687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:657376-657423:1:exon

position:657376:1
position: 657376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657423:1
position: 657423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:657513-657555:1:exon

position:657513:1
position: 657513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657555:1
position: 657555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:658634-658706:1:exon

position:658634:1
position: 658634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658706:1
position: 658706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:662648-662779:1:exon

position:662648:1
position: 662648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662779:1
position: 662779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:664117-664179:1:exon

position:664117:1
position: 664117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664179:1
position: 664179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:665890-665971:1:exon

position:665890:1
position: 665890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665971:1
position: 665971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:666854-666970:1:exon

position:666854:1
position: 666854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666970:1
position: 666970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:671046-671124:1:exon

position:671046:1
position: 671046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671124:1
position: 671124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:675465-675523:1:exon

position:675465:1
position: 675465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675523:1
position: 675523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:676624-676691:1:exon

position:676624:1
position: 676624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676691:1
position: 676691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:679908-679950:1:exon

position:679908:1
position: 679908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679950:1
position: 679950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:680461-680614:1:exon

position:680461:1
position: 680461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680614:1
position: 680614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:681604-681701:1:exon

position:681604:1
position: 681604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681701:1
position: 681701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:682205-682246:1:exon

position:682205:1
position: 682205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682246:1
position: 682246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:683288-683372:1:exon

position:683288:1
position: 683288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683372:1
position: 683372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:684484-684563:1:exon

position:684484:1
position: 684484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684563:1
position: 684563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:684942-685002:1:exon

position:684942:1
position: 684942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685002:1
position: 685002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:688873-688875:1:exon

position:688873:1
position: 688873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688875:1
position: 688875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:689167-689281:1:exon

position:689167:1
position: 689167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689281:1
position: 689281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:689602-689660:1:exon

position:689602:1
position: 689602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689660:1
position: 689660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:691282-691385:1:exon

position:691282:1
position: 691282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691385:1
position: 691385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:691739-691916:1:exon

position:691739:1
position: 691739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691916:1
position: 691916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:696465-696533:1:exon

position:696465:1
position: 696465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696533:1
position: 696533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:697966-698058:1:exon

position:697966:1
position: 697966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698058:1
position: 698058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:700896-700966:1:exon

position:700896:1
position: 700896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700966:1
position: 700966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:703012-703067:1:exon

position:703012:1
position: 703012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703067:1
position: 703067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:704941-706555:1:exon

position:704941:1
position: 704941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Map4k5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Map4k5
product: mitogen-activated protein kinase kinase kinase kinase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 4 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034514003.1
SIO_010081: Map4k5
subclass of: SO_0000673
so part of: Map4k5
location: join(613986..614371,632922..632979,652340..652430,652878..652942,655632..655687,657376..657423,657513..657555,658634..658706,662648..662779,664117..664179,665890..665971,666854..666970,671046..671124,675465..675523,676624..676691,679908..679950,680461..680614,681604..681701,682205..682246,683288..683372,684484..684563,684942..685002,689167..689281,689602..689660,691282..691385,691739..691916,696465..696533,697966..698058,700896..700966,703012..703067,704941..706555)
location: region:613986-706555:1
so has part: feature:613986-614371:1:exon
so has part: feature:632922-632979:1:exon
so has part: feature:652340-652430:1:exon
so has part: feature:652878-652942:1:exon
so has part: feature:655632-655687:1:exon
so has part: feature:657376-657423:1:exon
so has part: feature:657513-657555:1:exon
so has part: feature:658634-658706:1:exon
so has part: feature:662648-662779:1:exon
so has part: feature:664117-664179:1:exon
so has part: feature:665890-665971:1:exon
so has part: feature:666854-666970:1:exon
so has part: feature:671046-671124:1:exon
so has part: feature:675465-675523:1:exon
so has part: feature:676624-676691:1:exon
so has part: feature:679908-679950:1:exon
so has part: feature:680461-680614:1:exon
so has part: feature:681604-681701:1:exon
so has part: feature:682205-682246:1:exon
so has part: feature:683288-683372:1:exon
so has part: feature:684484-684563:1:exon
so has part: feature:684942-685002:1:exon
so has part: feature:689167-689281:1:exon
so has part: feature:689602-689660:1:exon
so has part: feature:691282-691385:1:exon
so has part: feature:691739-691916:1:exon
so has part: feature:696465-696533:1:exon
so has part: feature:697966-698058:1:exon
so has part: feature:700896-700966:1:exon
so has part: feature:703012-703067:1:exon
so has part: feature:704941-706555:1:exon

position:613986:1
position: 613986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613986-614371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632922-632979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652340-652430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652878-652942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655632-655687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:657376-657423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:657513-657555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658634-658706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:662648-662779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664117-664179:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665890-665971:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666854-666970:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671046-671124:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:675465-675523:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:676624-676691:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:679908-679950:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:680461-680614:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:681604-681701:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:682205-682246:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:683288-683372:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:684484-684563:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:684942-685002:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:689167-689281:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:689602-689660:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:691282-691385:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:691739-691916:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696465-696533:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697966-698058:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:700896-700966:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:703012-703067:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:704941-706555:1:exon

Map4k5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Map4k5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase kinase 5 isoform X1
translation: MEAPLRPAADILRRNPQHDYELVQRVGSGTYGDVYKARNVHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHTKGKMHRDIKGANILLTDHGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELGELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNPKKRPTAERLLTHTFVGQSGLSRALAVELLDKVNNPDNHAHYSEGDDDDFEPHAIIRHTIRSTNRNSRAERTASEINFDKLQFEPPLRKETEARDEMGLSSEPNFILHWNPFVDGANTGRSTSKRAIPPPLPPKPRINTYPEDSLPDEEKSSTVKRCPDPESRAPQVLRRQSSPSCVPVPETSSIGNGDGISKLISENTEGSAQAPQLPRKKDKRDFPKPTINGLPPTPKVLMGACFSKVFDGCPLKINCATSWIHPDTKDQYIIFGTEDGIYTLNLNELHEATMEQLFPRKCTWLYVINNTLMSLSEGKTFQLYSHNLIALFEQAKKPGLAAHIQTHRFPDRILPRKFALTTKIPDTKGCHKCCIVRNPYTGHKYLCGALQSGIVLLQWYEPMQKFMLIKHFDFPLPSPLNVFEMLVTPEQEYPMVCVAVSKGTESNQVVQFETINLNSASSWFTEIGAGSQQLDSIHVTQLERDTVLVCLDKFVKIVNLQGKLKSSKKLASELSFDFRIESVVCLQDSVLAFWKHGMQGKSFKSDEVTQEISDETRVFRLLGSDRVVVLESRPTENPTAHSNLYILAGHENSY
SIO_010081: Map4k5
subclass of: SO_0000673
so part of: Map4k5
location: join(614264..614371,632922..632979,652340..652430,652878..652942,655632..655687,657376..657423,657513..657555,658634..658706,662648..662779,664117..664179,665890..665971,666854..666970,671046..671124,675465..675523,676624..676691,679908..679950,680461..680614,681604..681701,682205..682246,683288..683372,684484..684563,684942..685002,688873..688875,689167..689281,689602..689660,691282..691385,691739..691916,696465..696533,697966..698058,700896..700966,703012..703067,704941..705028)
location: region:614264-705028:1
so has part: feature:614264-614371:1:exon
so has part: feature:632922-632979:1:exon
so has part: feature:652340-652430:1:exon
so has part: feature:652878-652942:1:exon
so has part: feature:655632-655687:1:exon
so has part: feature:657376-657423:1:exon
so has part: feature:657513-657555:1:exon
so has part: feature:658634-658706:1:exon
so has part: feature:662648-662779:1:exon
so has part: feature:664117-664179:1:exon
so has part: feature:665890-665971:1:exon
so has part: feature:666854-666970:1:exon
so has part: feature:671046-671124:1:exon
so has part: feature:675465-675523:1:exon
so has part: feature:676624-676691:1:exon
so has part: feature:679908-679950:1:exon
so has part: feature:680461-680614:1:exon
so has part: feature:681604-681701:1:exon
so has part: feature:682205-682246:1:exon
so has part: feature:683288-683372:1:exon
so has part: feature:684484-684563:1:exon
so has part: feature:684942-685002:1:exon
so has part: feature:688873-688875:1:exon
so has part: feature:689167-689281:1:exon
so has part: feature:689602-689660:1:exon
so has part: feature:691282-691385:1:exon
so has part: feature:691739-691916:1:exon
so has part: feature:696465-696533:1:exon
so has part: feature:697966-698058:1:exon
so has part: feature:700896-700966:1:exon
so has part: feature:703012-703067:1:exon
so has part: feature:704941-705028:1:exon

XP_034369893.1
type: Protein
SIO_000068: ncbiprotein

position:614264:1
position: 614264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705028:1
position: 705028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614264-614371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632922-632979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652340-652430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652878-652942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655632-655687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:657376-657423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:657513-657555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658634-658706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:662648-662779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664117-664179:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665890-665971:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666854-666970:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671046-671124:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:675465-675523:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:676624-676691:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:679908-679950:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:680461-680614:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:681604-681701:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:682205-682246:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:683288-683372:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:684484-684563:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:684942-685002:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:688873-688875:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:689167-689281:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:689602-689660:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:691282-691385:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:691739-691916:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:696465-696533:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:697966-698058:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:700896-700966:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:703012-703067:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:704941-705028:1:exon

Map4k5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Map4k5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase kinase 5 isoform X2
translation: MEAPLRPAADILRRNPQHDYELVQRVGSGTYGDVYKARNVHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHTKGKMHRDIKGANILLTDHGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELGELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKIALTKNPKKRPTAERLLTHTFVGQSGLSRALAVELLDKVNNPDNHAHYSEGDDDDFEPHAIIRHTIRSTNRNSRAERTASEINFDKLQFEPPLRKETEARDEMGLSSEPNFILHWNPFVDGANTGRSTSKRAIPPPLPPKPRINTYPEDSLPDEEKSSTVKRCPDPESRAPQVLRRQSSPSCVPVPETSSIGNGDGISKLISENTEGSAQAPQLPRKKDKRDFPKPTINGLPPTPKVLMGACFSKVFDGCPLKINCATSWIHPDTKDQYIIFGTEDGIYTLNLNELHEATMEQLFPRKCTWLYVINNTLMSLSGKTFQLYSHNLIALFEQAKKPGLAAHIQTHRFPDRILPRKFALTTKIPDTKGCHKCCIVRNPYTGHKYLCGALQSGIVLLQWYEPMQKFMLIKHFDFPLPSPLNVFEMLVTPEQEYPMVCVAVSKGTESNQVVQFETINLNSASSWFTEIGAGSQQLDSIHVTQLERDTVLVCLDKFVKIVNLQGKLKSSKKLASELSFDFRIESVVCLQDSVLAFWKHGMQGKSFKSDEVTQEISDETRVFRLLGSDRVVVLESRPTENPTAHSNLYILAGHENSY
SIO_010081: Map4k5
subclass of: SO_0000673
so part of: Map4k5
location: join(614264..614371,632922..632979,652340..652430,652878..652942,655632..655687,657376..657423,657513..657555,658634..658706,662648..662779,664117..664179,665890..665971,666854..666970,671046..671124,675465..675523,676624..676691,679908..679950,680461..680614,681604..681701,682205..682246,683288..683372,684484..684563,684942..685002,689167..689281,689602..689660,691282..691385,691739..691916,696465..696533,697966..698058,700896..700966,703012..703067,704941..705028)
location: region:614264-705028:1
so has part: feature:614264-614371:1:exon
so has part: feature:632922-632979:1:exon
so has part: feature:652340-652430:1:exon
so has part: feature:652878-652942:1:exon
so has part: feature:655632-655687:1:exon
so has part: feature:657376-657423:1:exon
so has part: feature:657513-657555:1:exon
so has part: feature:658634-658706:1:exon
so has part: feature:662648-662779:1:exon
so has part: feature:664117-664179:1:exon
so has part: feature:665890-665971:1:exon
so has part: feature:666854-666970:1:exon
so has part: feature:671046-671124:1:exon
so has part: feature:675465-675523:1:exon
so has part: feature:676624-676691:1:exon
so has part: feature:679908-679950:1:exon
so has part: feature:680461-680614:1:exon
so has part: feature:681604-681701:1:exon
so has part: feature:682205-682246:1:exon
so has part: feature:683288-683372:1:exon
so has part: feature:684484-684563:1:exon
so has part: feature:684942-685002:1:exon
so has part: feature:689167-689281:1:exon
so has part: feature:689602-689660:1:exon
so has part: feature:691282-691385:1:exon
so has part: feature:691739-691916:1:exon
so has part: feature:696465-696533:1:exon
so has part: feature:697966-698058:1:exon
so has part: feature:700896-700966:1:exon
so has part: feature:703012-703067:1:exon
so has part: feature:704941-705028:1:exon

XP_034369894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:614264-614371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632922-632979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652340-652430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652878-652942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:655632-655687:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:657376-657423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:657513-657555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658634-658706:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:662648-662779:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:664117-664179:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:665890-665971:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:666854-666970:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671046-671124:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:675465-675523:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:676624-676691:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:679908-679950:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:680461-680614:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:681604-681701:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:682205-682246:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:683288-683372:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:684484-684563:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:684942-685002:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:689167-689281:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:689602-689660:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:691282-691385:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:691739-691916:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:696465-696533:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:697966-698058:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:700896-700966:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:703012-703067:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:704941-705028:1:exon

Cdkl1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Cdkl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 719763..767163
location: region:719763-767163:1
so has part: feature:719763-767163:1:exon
subclass of: SO_0000010

117717080
type: Gene
SIO_000068: ncbigene

position:719763:1
position: 719763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767163:1
position: 767163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719763-767163:1:exon

Cdkl1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cdkl1
product: cyclin dependent kinase like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 long SRA read, 11 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034514304.1
SIO_010081: Cdkl1
subclass of: SO_0000673
so part of: Cdkl1
location: join(719763..720073,720719..720993,740795..740916,750721..750793,753546..753636,754231..754431,756560..756642,759234..759290,760982..761137,763472..767163)
location: region:719763-767163:1
so has part: feature:719763-720073:1:exon
so has part: feature:720719-720993:1:exon
so has part: feature:740795-740916:1:exon
so has part: feature:750721-750793:1:exon
so has part: feature:753546-753636:1:exon
so has part: feature:754231-754431:1:exon
so has part: feature:756560-756642:1:exon
so has part: feature:759234-759290:1:exon
so has part: feature:760982-761137:1:exon
so has part: feature:763472-767163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719763-720073:1:exon

position:720073:1
position: 720073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720719-720993:1:exon

position:720719:1
position: 720719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720993:1
position: 720993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:740795-740916:1:exon

position:740795:1
position: 740795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740916:1
position: 740916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:750721-750793:1:exon

position:750721:1
position: 750721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750793:1
position: 750793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:753546-753636:1:exon

position:753546:1
position: 753546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753636:1
position: 753636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:754231-754431:1:exon

position:754231:1
position: 754231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754431:1
position: 754431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:756560-756642:1:exon

position:756560:1
position: 756560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756642:1
position: 756642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:759234-759290:1:exon

position:759234:1
position: 759234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759290:1
position: 759290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:760982-761137:1:exon

position:760982:1
position: 760982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761137:1
position: 761137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:763472-767163:1:exon

position:763472:1
position: 763472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Cdkl1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cdkl1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase-like 1
translation: MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKRFLETEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEPLVKNITWQTLQAVNFCHNHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPGDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSMNQYFSGVKIPDPEDMETLELKFPNISYSALGFLKGCLHMDPAERLTCEQLLQHPYFDSIREVGELTRQHDKPVRKTLRQSRKHLTGLQYLPQLTSSSILPALDSKKYHCSTKKFNYHFPNI
SIO_010081: Cdkl1
subclass of: SO_0000673
so part of: Cdkl1
location: join(720826..720993,740795..740916,750721..750793,753546..753636,754231..754431,756560..756642,759234..759290,760982..761137,763472..763579)
location: region:720826-763579:1
so has part: feature:720826-720993:1:exon
so has part: feature:740795-740916:1:exon
so has part: feature:750721-750793:1:exon
so has part: feature:753546-753636:1:exon
so has part: feature:754231-754431:1:exon
so has part: feature:756560-756642:1:exon
so has part: feature:759234-759290:1:exon
so has part: feature:760982-761137:1:exon
so has part: feature:763472-763579:1:exon

XP_034370195.1
type: Protein
SIO_000068: ncbiprotein

position:720826:1
position: 720826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763579:1
position: 763579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720826-720993:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:740795-740916:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750721-750793:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753546-753636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:754231-754431:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:756560-756642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759234-759290:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:760982-761137:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:763472-763579:1:exon

Dmac2l
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Dmac2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(765730..782977)
location: region:765730-782977:-1
so has part: feature:765730-782977:-1:exon
subclass of: SO_0000010

117717081
type: Gene
SIO_000068: ncbigene

position:765730:-1
position: 765730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782977:-1
position: 782977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765730-782977:-1:exon

Dmac2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dmac2l
product: distal membrane arm assembly complex 2 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 6 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034514306.1
SIO_010081: Dmac2l
subclass of: SO_0000673
so part of: Dmac2l
location: complement(join(765730..766654,767872..768043,768585..768793,770684..770794,782353..782977))
location: region:765730-782977:-1
so has part: feature:782353-782977:-1:exon
so has part: feature:770684-770794:-1:exon
so has part: feature:768585-768793:-1:exon
so has part: feature:767872-768043:-1:exon
so has part: feature:765730-766654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:782353-782977:-1:exon

position:782353:-1
position: 782353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770684-770794:-1:exon

position:770684:-1
position: 770684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770794:-1
position: 770794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:768585-768793:-1:exon

position:768585:-1
position: 768585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768793:-1
position: 768793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:767872-768043:-1:exon

position:767872:-1
position: 767872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768043:-1
position: 768043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:765730-766654:-1:exon

position:766654:-1
position: 766654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dmac2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dmac2l
product: distal membrane arm assembly complex 2 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 long SRA reads, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514305.1
SIO_010081: Dmac2l
subclass of: SO_0000673
so part of: Dmac2l
location: complement(join(765730..766654,767872..768043,768585..768793,770684..770794,782907..782971))
location: region:765730-782971:-1
so has part: feature:782907-782971:-1:exon
so has part: feature:770684-770794:-1:exon
so has part: feature:768585-768793:-1:exon
so has part: feature:767872-768043:-1:exon
so has part: feature:765730-766654:-1:exon

position:782971:-1
position: 782971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782907-782971:-1:exon

position:782907:-1
position: 782907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770684-770794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768585-768793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:767872-768043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765730-766654:-1:exon

Dmac2l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dmac2l
product: distal membrane arm assembly complex 2 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034514307.1
SIO_010081: Dmac2l
subclass of: SO_0000673
so part of: Dmac2l
location: complement(join(765730..766654,767872..768043,768585..768793,770684..770794,782525..782678))
location: region:765730-782678:-1
so has part: feature:782525-782678:-1:exon
so has part: feature:770684-770794:-1:exon
so has part: feature:768585-768793:-1:exon
so has part: feature:767872-768043:-1:exon
so has part: feature:765730-766654:-1:exon

position:782678:-1
position: 782678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782525-782678:-1:exon

position:782525:-1
position: 782525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770684-770794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:768585-768793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:767872-768043:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765730-766654:-1:exon

Dmac2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dmac2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit s, mitochondrial
translation: MMMFGKISRQLFSLKKIPWSCDSRYFWEWLNTVFNKVDYERIKDVGPDRAASEWLLRCGAKVRYCGHQKWLQDYNKLPGGSVDRYKIQAIDATDSCIMDIGLEHMVGLEHVEKITLCKCHYIEDNSLQRLSQLENLRKSLLELEIIACGNVTDNGIIALRHFRNLRYLFLSDLPGIKDKEYLAQVFKTALPSLELKLNLK
SIO_010081: Dmac2l
subclass of: SO_0000673
so part of: Dmac2l
location: complement(join(766540..766654,767872..768043,768585..768793,770684..770790))
location: region:766540-770790:-1
so has part: feature:770684-770790:-1:exon
so has part: feature:768585-768793:-1:exon
so has part: feature:767872-768043:-1:exon
so has part: feature:766540-766654:-1:exon

XP_034370196.1
type: Protein
SIO_000068: ncbiprotein

position:766540:-1
position: 766540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770790:-1
position: 770790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770684-770790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768585-768793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767872-768043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:766540-766654:-1:exon

Dmac2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dmac2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit s, mitochondrial
translation: MMMFGKISRQLFSLKKIPWSCDSRYFWEWLNTVFNKVDYERIKDVGPDRAASEWLLRCGAKVRYCGHQKWLQDYNKLPGGSVDRYKIQAIDATDSCIMDIGLEHMVGLEHVEKITLCKCHYIEDNSLQRLSQLENLRKSLLELEIIACGNVTDNGIIALRHFRNLRYLFLSDLPGIKDKEYLAQVFKTALPSLELKLNLK
SIO_010081: Dmac2l
subclass of: SO_0000673
so part of: Dmac2l
location: complement(join(766540..766654,767872..768043,768585..768793,770684..770790))
location: region:766540-770790:-1
so has part: feature:770684-770790:-1:exon
so has part: feature:768585-768793:-1:exon
so has part: feature:767872-768043:-1:exon
so has part: feature:766540-766654:-1:exon

XP_034370197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:770684-770790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768585-768793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767872-768043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:766540-766654:-1:exon

Dmac2l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dmac2l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit s, mitochondrial
translation: MMMFGKISRQLFSLKKIPWSCDSRYFWEWLNTVFNKVDYERIKDVGPDRAASEWLLRCGAKVRYCGHQKWLQDYNKLPGGSVDRYKIQAIDATDSCIMDIGLEHMVGLEHVEKITLCKCHYIEDNSLQRLSQLENLRKSLLELEIIACGNVTDNGIIALRHFRNLRYLFLSDLPGIKDKEYLAQVFKTALPSLELKLNLK
SIO_010081: Dmac2l
subclass of: SO_0000673
so part of: Dmac2l
location: complement(join(766540..766654,767872..768043,768585..768793,770684..770790))
location: region:766540-770790:-1
so has part: feature:770684-770790:-1:exon
so has part: feature:768585-768793:-1:exon
so has part: feature:767872-768043:-1:exon
so has part: feature:766540-766654:-1:exon

XP_034370198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:770684-770790:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:768585-768793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:767872-768043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:766540-766654:-1:exon

L2hgdh
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: L2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 783053..814944
location: region:783053-814944:1
so has part: feature:783053-814944:1:exon
subclass of: SO_0000010

117717300
type: Gene
SIO_000068: ncbigene

position:783053:1
position: 783053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814944:1
position: 814944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783053-814944:1:exon

L2hgdh
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: L2hgdh
product: L-2-hydroxyglutarate dehydrogenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 3 long SRA reads, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034514640.1
SIO_010081: L2hgdh
subclass of: SO_0000673
so part of: L2hgdh
location: join(783053..783263,785672..785787,786513..786664,792724..792855,797162..797324,798517..798551,801696..801863,802642..802799,804272..804403,812848..814944)
location: region:783053-814944:1
so has part: feature:783053-783263:1:exon
so has part: feature:785672-785787:1:exon
so has part: feature:786513-786664:1:exon
so has part: feature:792724-792855:1:exon
so has part: feature:797162-797324:1:exon
so has part: feature:798517-798551:1:exon
so has part: feature:801696-801863:1:exon
so has part: feature:802642-802799:1:exon
so has part: feature:804272-804403:1:exon
so has part: feature:812848-814944:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:783053-783263:1:exon

position:783263:1
position: 783263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:785672-785787:1:exon

position:785672:1
position: 785672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785787:1
position: 785787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:786513-786664:1:exon

position:786513:1
position: 786513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786664:1
position: 786664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792724-792855:1:exon

position:792724:1
position: 792724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792855:1
position: 792855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:797162-797324:1:exon

position:797162:1
position: 797162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797324:1
position: 797324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:798517-798551:1:exon

position:798517:1
position: 798517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798551:1
position: 798551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:801696-801863:1:exon

position:801696:1
position: 801696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801863:1
position: 801863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:802642-802799:1:exon

position:802642:1
position: 802642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802799:1
position: 802799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:804272-804403:1:exon

position:804272:1
position: 804272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804403:1
position: 804403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:812848-814944:1:exon

position:812848:1
position: 812848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

L2hgdh
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: L2hgdh
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: L-2-hydroxyglutarate dehydrogenase, mitochondrial
translation: MWPTLRYVSGVCGPARCCVTGIFLRARGPASRVPGLLCGGGRSSSTSSFDIVIVGGGIVGLASARTLILKHPGLSIGVVEKEKDLALHQTGRNSGVIHSGIYYKPESLKAKLCVEGAALIYEYCDLKGIPYRQCGKLIVAVEQEEIPRLQALYERGLQNGVQGLRLIQQEDIKKKEPYCRGLMAIDCPYTGIVNYQQVALSFAQDFQEAGGSILKDFEVKDIEIVKENPSRSKDGMKYPIAVKNSKGKEIRCRYVVTCAGLYSDRISELSGCNPDPQIVPFRGDYLILKPEKGYLVKGNIYPVPDSRFPFLGVHFTPRLDGTIWLGPNAVLAFKREGYRPFDFDARDVMEVILKSGFIKLVFQNFSYGVNEIYKACFLSETVKHLQKFIPEITISDVLRGPAGVRAQALDRDGKLVDDFVFDGGTGEIGDRVLHVRNAPSPAATSSLAISRMIAEEVQQRFKL
SIO_010081: L2hgdh
subclass of: SO_0000673
so part of: L2hgdh
location: join(783124..783263,785672..785787,786513..786664,792724..792855,797162..797324,798517..798551,801696..801863,802642..802799,804272..804403,812848..813043)
location: region:783124-813043:1
so has part: feature:783124-783263:1:exon
so has part: feature:785672-785787:1:exon
so has part: feature:786513-786664:1:exon
so has part: feature:792724-792855:1:exon
so has part: feature:797162-797324:1:exon
so has part: feature:798517-798551:1:exon
so has part: feature:801696-801863:1:exon
so has part: feature:802642-802799:1:exon
so has part: feature:804272-804403:1:exon
so has part: feature:812848-813043:1:exon

XP_034370531.1
type: Protein
SIO_000068: ncbiprotein

position:783124:1
position: 783124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813043:1
position: 813043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783124-783263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785672-785787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:786513-786664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792724-792855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797162-797324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:798517-798551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801696-801863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802642-802799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:804272-804403:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:812848-813043:1:exon

Sos2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Sos2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 823110..920197
location: region:823110-920197:1
so has part: feature:823110-920197:1:exon
subclass of: SO_0000010

117716781
type: Gene
SIO_000068: ncbigene

position:823110:1
position: 823110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920197:1
position: 920197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823110-920197:1:exon

Sos2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sos2
product: SOS Ras/Rho guanine nucleotide exchange factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513818.1
SIO_010081: Sos2
subclass of: SO_0000673
so part of: Sos2
location: join(823110..823492,848292..848417,854026..854157,856009..856173,866451..866657,870017..870160,873518..873628,877809..877907,888820..888944,889489..890144,890642..890723,892015..892137,895089..895192,898205..898427,902484..902603,902754..902916,906490..906607,908831..909003,911481..911597,913417..913678,915377..915418,917231..917340,918305..920197)
location: region:823110-920197:1
so has part: feature:823110-823492:1:exon
so has part: feature:848292-848417:1:exon
so has part: feature:854026-854157:1:exon
so has part: feature:856009-856173:1:exon
so has part: feature:866451-866657:1:exon
so has part: feature:870017-870160:1:exon
so has part: feature:873518-873628:1:exon
so has part: feature:877809-877907:1:exon
so has part: feature:888820-888944:1:exon
so has part: feature:889489-890144:1:exon
so has part: feature:890642-890723:1:exon
so has part: feature:892015-892137:1:exon
so has part: feature:895089-895192:1:exon
so has part: feature:898205-898427:1:exon
so has part: feature:902484-902603:1:exon
so has part: feature:902754-902916:1:exon
so has part: feature:906490-906607:1:exon
so has part: feature:908831-909003:1:exon
so has part: feature:911481-911597:1:exon
so has part: feature:913417-913678:1:exon
so has part: feature:915377-915418:1:exon
so has part: feature:917231-917340:1:exon
so has part: feature:918305-920197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823110-823492:1:exon

position:823492:1
position: 823492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:848292-848417:1:exon

position:848292:1
position: 848292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848417:1
position: 848417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:854026-854157:1:exon

position:854026:1
position: 854026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854157:1
position: 854157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:856009-856173:1:exon

position:856009:1
position: 856009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856173:1
position: 856173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:866451-866657:1:exon

position:866451:1
position: 866451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866657:1
position: 866657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:870017-870160:1:exon

position:870017:1
position: 870017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870160:1
position: 870160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:873518-873628:1:exon

position:873518:1
position: 873518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873628:1
position: 873628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:877809-877907:1:exon

position:877809:1
position: 877809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877907:1
position: 877907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:888820-888944:1:exon

position:888820:1
position: 888820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888944:1
position: 888944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:889489-890144:1:exon

position:889489:1
position: 889489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890144:1
position: 890144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:890642-890723:1:exon

position:890642:1
position: 890642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890723:1
position: 890723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:892015-892137:1:exon

position:892015:1
position: 892015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892137:1
position: 892137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:895089-895192:1:exon

position:895089:1
position: 895089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895192:1
position: 895192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:898205-898427:1:exon

position:898205:1
position: 898205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898427:1
position: 898427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:902484-902603:1:exon

position:902484:1
position: 902484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902603:1
position: 902603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:902754-902916:1:exon

position:902754:1
position: 902754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902916:1
position: 902916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:906490-906607:1:exon

position:906490:1
position: 906490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906607:1
position: 906607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:908831-909003:1:exon

position:908831:1
position: 908831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909003:1
position: 909003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:911481-911597:1:exon

position:911481:1
position: 911481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911597:1
position: 911597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:913417-913678:1:exon

position:913417:1
position: 913417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913678:1
position: 913678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:915377-915418:1:exon

position:915377:1
position: 915377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915418:1
position: 915418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:917231-917340:1:exon

position:917231:1
position: 917231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917340:1
position: 917340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:918305-920197:1:exon

position:918305:1
position: 918305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sos2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sos2
product: SOS Ras/Rho guanine nucleotide exchange factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 long SRA reads, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513816.1
SIO_010081: Sos2
subclass of: SO_0000673
so part of: Sos2
location: join(823334..823492,848292..848417,854026..854157,856009..856173,866451..866657,870017..870160,873518..873628,877809..877907,888817..888944,889489..890144,890642..890723,892015..892137,895089..895192,898205..898427,902484..902603,902754..902916,906490..906607,908831..909003,911481..911597,913417..913678,915377..915418,917231..917340,918305..919091)
location: region:823334-919091:1
so has part: feature:823334-823492:1:exon
so has part: feature:848292-848417:1:exon
so has part: feature:854026-854157:1:exon
so has part: feature:856009-856173:1:exon
so has part: feature:866451-866657:1:exon
so has part: feature:870017-870160:1:exon
so has part: feature:873518-873628:1:exon
so has part: feature:877809-877907:1:exon
so has part: feature:888817-888944:1:exon
so has part: feature:889489-890144:1:exon
so has part: feature:890642-890723:1:exon
so has part: feature:892015-892137:1:exon
so has part: feature:895089-895192:1:exon
so has part: feature:898205-898427:1:exon
so has part: feature:902484-902603:1:exon
so has part: feature:902754-902916:1:exon
so has part: feature:906490-906607:1:exon
so has part: feature:908831-909003:1:exon
so has part: feature:911481-911597:1:exon
so has part: feature:913417-913678:1:exon
so has part: feature:915377-915418:1:exon
so has part: feature:917231-917340:1:exon
so has part: feature:918305-919091:1:exon

position:823334:1
position: 823334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919091:1
position: 919091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823334-823492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848292-848417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854026-854157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856009-856173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866451-866657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870017-870160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:873518-873628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877809-877907:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888817-888944:1:exon

position:888817:1
position: 888817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:889489-890144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890642-890723:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892015-892137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895089-895192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898205-898427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902484-902603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902754-902916:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906490-906607:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:908831-909003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:911481-911597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913417-913678:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:915377-915418:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917231-917340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:918305-919091:1:exon

Sos2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sos2
product: SOS Ras/Rho guanine nucleotide exchange factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513814.1
SIO_010081: Sos2
subclass of: SO_0000673
so part of: Sos2
location: join(823353..823492,848292..848417,854026..854157,856009..856173,866451..866657,870017..870160,873518..873628,877809..877907,888817..888944,889489..890144,890642..890723,892015..892137,895089..895192,898205..898427,902484..902603,902754..902964,906490..906607,908831..909003,911481..911597,913417..913678,915377..915418,917231..917340,918305..918976)
location: region:823353-918976:1
so has part: feature:823353-823492:1:exon
so has part: feature:848292-848417:1:exon
so has part: feature:854026-854157:1:exon
so has part: feature:856009-856173:1:exon
so has part: feature:866451-866657:1:exon
so has part: feature:870017-870160:1:exon
so has part: feature:873518-873628:1:exon
so has part: feature:877809-877907:1:exon
so has part: feature:888817-888944:1:exon
so has part: feature:889489-890144:1:exon
so has part: feature:890642-890723:1:exon
so has part: feature:892015-892137:1:exon
so has part: feature:895089-895192:1:exon
so has part: feature:898205-898427:1:exon
so has part: feature:902484-902603:1:exon
so has part: feature:902754-902964:1:exon
so has part: feature:906490-906607:1:exon
so has part: feature:908831-909003:1:exon
so has part: feature:911481-911597:1:exon
so has part: feature:913417-913678:1:exon
so has part: feature:915377-915418:1:exon
so has part: feature:917231-917340:1:exon
so has part: feature:918305-918976:1:exon

position:823353:1
position: 823353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918976:1
position: 918976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823353-823492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848292-848417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854026-854157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856009-856173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866451-866657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870017-870160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:873518-873628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877809-877907:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888817-888944:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889489-890144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890642-890723:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892015-892137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895089-895192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898205-898427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902484-902603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902754-902964:1:exon

position:902964:1
position: 902964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:906490-906607:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:908831-909003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:911481-911597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913417-913678:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:915377-915418:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917231-917340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:918305-918976:1:exon

Sos2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sos2
product: SOS Ras/Rho guanine nucleotide exchange factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513815.1
SIO_010081: Sos2
subclass of: SO_0000673
so part of: Sos2
location: join(823353..823492,848292..848417,854026..854157,856009..856173,866451..866657,870017..870160,873518..873628,877809..877907,888820..888944,889489..890144,890642..890723,892015..892137,895089..895192,898205..898427,902484..902603,902754..902964,906490..906607,908831..909003,911481..911597,913417..913678,915377..915418,917231..917340,918305..918976)
location: region:823353-918976:1
so has part: feature:823353-823492:1:exon
so has part: feature:848292-848417:1:exon
so has part: feature:854026-854157:1:exon
so has part: feature:856009-856173:1:exon
so has part: feature:866451-866657:1:exon
so has part: feature:870017-870160:1:exon
so has part: feature:873518-873628:1:exon
so has part: feature:877809-877907:1:exon
so has part: feature:888820-888944:1:exon
so has part: feature:889489-890144:1:exon
so has part: feature:890642-890723:1:exon
so has part: feature:892015-892137:1:exon
so has part: feature:895089-895192:1:exon
so has part: feature:898205-898427:1:exon
so has part: feature:902484-902603:1:exon
so has part: feature:902754-902964:1:exon
so has part: feature:906490-906607:1:exon
so has part: feature:908831-909003:1:exon
so has part: feature:911481-911597:1:exon
so has part: feature:913417-913678:1:exon
so has part: feature:915377-915418:1:exon
so has part: feature:917231-917340:1:exon
so has part: feature:918305-918976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823353-823492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848292-848417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854026-854157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856009-856173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866451-866657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870017-870160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:873518-873628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877809-877907:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888820-888944:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889489-890144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890642-890723:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892015-892137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895089-895192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898205-898427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902484-902603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902754-902964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906490-906607:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:908831-909003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:911481-911597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913417-913678:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:915377-915418:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917231-917340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:918305-918976:1:exon

Sos2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sos2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: son of sevenless homolog 2 isoform X1
translation: MQQTPQPYEFFSEENSPKWRGLLVPALRKVQEQVHPTLSANEESLYYIEELIFQLLNKLCMAQPRTVQDVEERVQKTFPHPIDKWAIADAQSAIEKRKRRNPLLLPVDKIHPSLKEVLGYKVDYHVSLYIVAVLEYISADILKLAGNYVFNIRHYEISQQDIKVSMCADKVLMDMFDQDDDIGLVSLCEDEPCSSGELNYYDLVRTEIAEERQYLRELNMIIKVFREAFLSDRKLFKPSEIEKIFSNISDIHELTVKLLGLIEDTVEMTDESSPHPLAGSCFEDLAEEQAFDPYETLSQDILAPEFNDYFSKLMARPAVALHFQSIADGFKEAVRYVLPRLMLVPVYHCWHYFELLKQLKARSEEQEDRECLNQAITALMNLQGSMDRIYKQHSPRRRPGDPVCLFYNRQLRSKHLAIKKMNEIQKNIDGWEGKDIGQCCNEFIMEGPLTRIGAKHERHIFLFDGLMISCKPNHSQTRLPGYSSAEYRLKEKFVMRKIQICDKEDACEYKHAFELVSKDENSVIFAAKSAEEKNNWMAALISLHYRSTLDRMLDSVLLKEENEQPLRLPSPDVYRFVVTDSEENIVFEDNLQSRSGIPIIKGGTVVKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLLIERFEIPEPEPTEADKQALEKGEQPISADLKRFRKEYVQPVQLRVLNVFRHWVEHHYYDFERDLELLERLESFISSVRGKAMKKWVESIAKIIKRKKQAQANGVSHNITFESSPPPIEWHISRAGQFETFDLMTLHPIEIARQLTLLESDLYRKVQPSELVGSVWTKEDKEINSPNLLKMIRHTTNLTLWFEKCIVEAENFEERVAVLSRIVEILQVFQDLNNFNGVLEIVSAVNSVSVYRLDHTFEVSVSSVSVYRLDHTFEALQERKRRILDDAVELSQDHFKKYLVKLKSINPPCVPFFGIYLTNILKTEEGNSDFLKRKGKDLINFSKRRKVAEITGEIQQYQNQPYCLRTEPEIRRFFENLNPMGILCEKEFTDYLFNKSLEIEPRNCKQPPRFPRKSTFSLKSPGIRPNAGRHGSTSGTLRGHPTPLEREPYKISFSRIAETEPESTVSAPTSPNTPSTPPVSASSDHSVFLDVDLNSSCGSNTIFAPVLLPQSKTFFSSCGSLHKLSEEPLIPPPLPPRKKFDHDAPNSKGAMKSDDDPPAIPPRQPPPPKVKPRVPVLMGTFDGPVPSPPPPPPRDPLPDTPPPVPLRPPEHFINCPFNLQPPPLGHPHRDPDWLRDVSTCPNSPSTPPTTPSPRIPRRCHLLSSSHNNLAHPPAPPVPPRQNSSPHLPKLPPKTYKRELSHPPLYRLPLLENAETPQ
SIO_010081: Sos2
subclass of: SO_0000673
so part of: Sos2
location: join(823406..823492,848292..848417,854026..854157,856009..856173,866451..866657,870017..870160,873518..873628,877809..877907,888817..888944,889489..890144,890642..890723,892015..892137,895089..895192,898205..898427,902484..902603,902754..902964,906490..906607,908831..909003,911481..911597,913417..913678,915377..915418,917231..917340,918305..918814)
location: region:823406-918814:1
so has part: feature:823406-823492:1:exon
so has part: feature:848292-848417:1:exon
so has part: feature:854026-854157:1:exon
so has part: feature:856009-856173:1:exon
so has part: feature:866451-866657:1:exon
so has part: feature:870017-870160:1:exon
so has part: feature:873518-873628:1:exon
so has part: feature:877809-877907:1:exon
so has part: feature:888817-888944:1:exon
so has part: feature:889489-890144:1:exon
so has part: feature:890642-890723:1:exon
so has part: feature:892015-892137:1:exon
so has part: feature:895089-895192:1:exon
so has part: feature:898205-898427:1:exon
so has part: feature:902484-902603:1:exon
so has part: feature:902754-902964:1:exon
so has part: feature:906490-906607:1:exon
so has part: feature:908831-909003:1:exon
so has part: feature:911481-911597:1:exon
so has part: feature:913417-913678:1:exon
so has part: feature:915377-915418:1:exon
so has part: feature:917231-917340:1:exon
so has part: feature:918305-918814:1:exon

XP_034369705.1
type: Protein
SIO_000068: ncbiprotein

position:823406:1
position: 823406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918814:1
position: 918814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823406-823492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848292-848417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854026-854157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856009-856173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866451-866657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870017-870160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:873518-873628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877809-877907:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888817-888944:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889489-890144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890642-890723:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892015-892137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895089-895192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898205-898427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902484-902603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902754-902964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906490-906607:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:908831-909003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:911481-911597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913417-913678:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:915377-915418:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917231-917340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:918305-918814:1:exon

Sos2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sos2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: son of sevenless homolog 2 isoform X3
translation: MQQTPQPYEFFSEENSPKWRGLLVPALRKVQEQVHPTLSANEESLYYIEELIFQLLNKLCMAQPRTVQDVEERVQKTFPHPIDKWAIADAQSAIEKRKRRNPLLLPVDKIHPSLKEVLGYKVDYHVSLYIVAVLEYISADILKLAGNYVFNIRHYEISQQDIKVSMCADKVLMDMFDQDDDIGLVSLCEDEPCSSGELNYYDLVRTEIAEERQYLRELNMIIKVFREAFLSDRKLFKPSEIEKIFSNISDIHELTVKLLGLIEDTVEMTDESSPHPLAGSCFEDLAEEQAFDPYETLSQDILAPEFNDYFSKLMARPAVALHFQSIADGFKEAVRYVLPRLMLVPVYHCWHYFELLKQLKARSEEQEDRECLNQAITALMNLQGSMDRIYKQHSPRRRPGDPVCLFYNRQLRSKHLAIKKMNEIQKNIDGWEGKDIGQCCNEFIMEGPLTRIGAKHERHIFLFDGLMISCKPNHSQTRLPGYSSAEYRLKEKFVMRKIQICDKEDACEYKHAFELVSKDENSVIFAAKSAEEKNNWMAALISLHYRSTLDRMLDSVLLKEENEQPLRLPSPDVYRFVVTDSEENIVFEDNLQSRSGIPIIKGGTVVKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLLIERFEIPEPEPTEADKQALEKGEQPISADLKRFRKEYVQPVQLRVLNVFRHWVEHHYYDFERDLELLERLESFISSVRGKAMKKWVESIAKIIKRKKQAQANGVSHNITFESSPPPIEWHISRAGQFETFDLMTLHPIEIARQLTLLESDLYRKVQPSELVGSVWTKEDKEINSPNLLKMIRHTTNLTLWFEKCIVEAENFEERVAVLSRIVEILQVFQDLNNFNGVLEIVSAVNSVSVYRLDHTFEALQERKRRILDDAVELSQDHFKKYLVKLKSINPPCVPFFGIYLTNILKTEEGNSDFLKRKGKDLINFSKRRKVAEITGEIQQYQNQPYCLRTEPEIRRFFENLNPMGILCEKEFTDYLFNKSLEIEPRNCKQPPRFPRKSTFSLKSPGIRPNAGRHGSTSGTLRGHPTPLEREPYKISFSRIAETEPESTVSAPTSPNTPSTPPVSASSDHSVFLDVDLNSSCGSNTIFAPVLLPQSKTFFSSCGSLHKLSEEPLIPPPLPPRKKFDHDAPNSKGAMKSDDDPPAIPPRQPPPPKVKPRVPVLMGTFDGPVPSPPPPPPRDPLPDTPPPVPLRPPEHFINCPFNLQPPPLGHPHRDPDWLRDVSTCPNSPSTPPTTPSPRIPRRCHLLSSSHNNLAHPPAPPVPPRQNSSPHLPKLPPKTYKRELSHPPLYRLPLLENAETPQ
SIO_010081: Sos2
subclass of: SO_0000673
so part of: Sos2
location: join(823406..823492,848292..848417,854026..854157,856009..856173,866451..866657,870017..870160,873518..873628,877809..877907,888817..888944,889489..890144,890642..890723,892015..892137,895089..895192,898205..898427,902484..902603,902754..902916,906490..906607,908831..909003,911481..911597,913417..913678,915377..915418,917231..917340,918305..918814)
location: region:823406-918814:1
so has part: feature:823406-823492:1:exon
so has part: feature:848292-848417:1:exon
so has part: feature:854026-854157:1:exon
so has part: feature:856009-856173:1:exon
so has part: feature:866451-866657:1:exon
so has part: feature:870017-870160:1:exon
so has part: feature:873518-873628:1:exon
so has part: feature:877809-877907:1:exon
so has part: feature:888817-888944:1:exon
so has part: feature:889489-890144:1:exon
so has part: feature:890642-890723:1:exon
so has part: feature:892015-892137:1:exon
so has part: feature:895089-895192:1:exon
so has part: feature:898205-898427:1:exon
so has part: feature:902484-902603:1:exon
so has part: feature:902754-902916:1:exon
so has part: feature:906490-906607:1:exon
so has part: feature:908831-909003:1:exon
so has part: feature:911481-911597:1:exon
so has part: feature:913417-913678:1:exon
so has part: feature:915377-915418:1:exon
so has part: feature:917231-917340:1:exon
so has part: feature:918305-918814:1:exon

XP_034369707.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:823406-823492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848292-848417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854026-854157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856009-856173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866451-866657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870017-870160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:873518-873628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877809-877907:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888817-888944:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889489-890144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890642-890723:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892015-892137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895089-895192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898205-898427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902484-902603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902754-902916:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906490-906607:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:908831-909003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:911481-911597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913417-913678:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:915377-915418:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917231-917340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:918305-918814:1:exon

Sos2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sos2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: son of sevenless homolog 2 isoform X2
translation: MQQTPQPYEFFSEENSPKWRGLLVPALRKVQEQVHPTLSANEESLYYIEELIFQLLNKLCMAQPRTVQDVEERVQKTFPHPIDKWAIADAQSAIEKRKRRNPLLLPVDKIHPSLKEVLGYKVDYHVSLYIVAVLEYISADILKLAGNYVFNIRHYEISQQDIKVSMCADKVLMDMFDQDDDIGLVSLCEDEPCSSGELNYYDLVRTEIAEERQYLRELNMIIKVFREAFLSDRKLFKPSEIEKIFSNISDIHELTVKLLGLIEDTVEMTDESSPHPLAGSCFEDLAEEQAFDPYETLSQDILAPEFNDYFSKLMARPAVALHFQSIADGFKEAVRYVLPRLMLVPVYHCWHYFELLKLKARSEEQEDRECLNQAITALMNLQGSMDRIYKQHSPRRRPGDPVCLFYNRQLRSKHLAIKKMNEIQKNIDGWEGKDIGQCCNEFIMEGPLTRIGAKHERHIFLFDGLMISCKPNHSQTRLPGYSSAEYRLKEKFVMRKIQICDKEDACEYKHAFELVSKDENSVIFAAKSAEEKNNWMAALISLHYRSTLDRMLDSVLLKEENEQPLRLPSPDVYRFVVTDSEENIVFEDNLQSRSGIPIIKGGTVVKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLLIERFEIPEPEPTEADKQALEKGEQPISADLKRFRKEYVQPVQLRVLNVFRHWVEHHYYDFERDLELLERLESFISSVRGKAMKKWVESIAKIIKRKKQAQANGVSHNITFESSPPPIEWHISRAGQFETFDLMTLHPIEIARQLTLLESDLYRKVQPSELVGSVWTKEDKEINSPNLLKMIRHTTNLTLWFEKCIVEAENFEERVAVLSRIVEILQVFQDLNNFNGVLEIVSAVNSVSVYRLDHTFEVSVSSVSVYRLDHTFEALQERKRRILDDAVELSQDHFKKYLVKLKSINPPCVPFFGIYLTNILKTEEGNSDFLKRKGKDLINFSKRRKVAEITGEIQQYQNQPYCLRTEPEIRRFFENLNPMGILCEKEFTDYLFNKSLEIEPRNCKQPPRFPRKSTFSLKSPGIRPNAGRHGSTSGTLRGHPTPLEREPYKISFSRIAETEPESTVSAPTSPNTPSTPPVSASSDHSVFLDVDLNSSCGSNTIFAPVLLPQSKTFFSSCGSLHKLSEEPLIPPPLPPRKKFDHDAPNSKGAMKSDDDPPAIPPRQPPPPKVKPRVPVLMGTFDGPVPSPPPPPPRDPLPDTPPPVPLRPPEHFINCPFNLQPPPLGHPHRDPDWLRDVSTCPNSPSTPPTTPSPRIPRRCHLLSSSHNNLAHPPAPPVPPRQNSSPHLPKLPPKTYKRELSHPPLYRLPLLENAETPQ
SIO_010081: Sos2
subclass of: SO_0000673
so part of: Sos2
location: join(823406..823492,848292..848417,854026..854157,856009..856173,866451..866657,870017..870160,873518..873628,877809..877907,888820..888944,889489..890144,890642..890723,892015..892137,895089..895192,898205..898427,902484..902603,902754..902964,906490..906607,908831..909003,911481..911597,913417..913678,915377..915418,917231..917340,918305..918814)
location: region:823406-918814:1
so has part: feature:823406-823492:1:exon
so has part: feature:848292-848417:1:exon
so has part: feature:854026-854157:1:exon
so has part: feature:856009-856173:1:exon
so has part: feature:866451-866657:1:exon
so has part: feature:870017-870160:1:exon
so has part: feature:873518-873628:1:exon
so has part: feature:877809-877907:1:exon
so has part: feature:888820-888944:1:exon
so has part: feature:889489-890144:1:exon
so has part: feature:890642-890723:1:exon
so has part: feature:892015-892137:1:exon
so has part: feature:895089-895192:1:exon
so has part: feature:898205-898427:1:exon
so has part: feature:902484-902603:1:exon
so has part: feature:902754-902964:1:exon
so has part: feature:906490-906607:1:exon
so has part: feature:908831-909003:1:exon
so has part: feature:911481-911597:1:exon
so has part: feature:913417-913678:1:exon
so has part: feature:915377-915418:1:exon
so has part: feature:917231-917340:1:exon
so has part: feature:918305-918814:1:exon

XP_034369706.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:823406-823492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848292-848417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854026-854157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856009-856173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866451-866657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870017-870160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:873518-873628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877809-877907:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888820-888944:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889489-890144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890642-890723:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892015-892137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895089-895192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898205-898427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902484-902603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902754-902964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906490-906607:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:908831-909003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:911481-911597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913417-913678:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:915377-915418:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917231-917340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:918305-918814:1:exon

Sos2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sos2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: son of sevenless homolog 2 isoform X4
translation: MQQTPQPYEFFSEENSPKWRGLLVPALRKVQEQVHPTLSANEESLYYIEELIFQLLNKLCMAQPRTVQDVEERVQKTFPHPIDKWAIADAQSAIEKRKRRNPLLLPVDKIHPSLKEVLGYKVDYHVSLYIVAVLEYISADILKLAGNYVFNIRHYEISQQDIKVSMCADKVLMDMFDQDDDIGLVSLCEDEPCSSGELNYYDLVRTEIAEERQYLRELNMIIKVFREAFLSDRKLFKPSEIEKIFSNISDIHELTVKLLGLIEDTVEMTDESSPHPLAGSCFEDLAEEQAFDPYETLSQDILAPEFNDYFSKLMARPAVALHFQSIADGFKEAVRYVLPRLMLVPVYHCWHYFELLKLKARSEEQEDRECLNQAITALMNLQGSMDRIYKQHSPRRRPGDPVCLFYNRQLRSKHLAIKKMNEIQKNIDGWEGKDIGQCCNEFIMEGPLTRIGAKHERHIFLFDGLMISCKPNHSQTRLPGYSSAEYRLKEKFVMRKIQICDKEDACEYKHAFELVSKDENSVIFAAKSAEEKNNWMAALISLHYRSTLDRMLDSVLLKEENEQPLRLPSPDVYRFVVTDSEENIVFEDNLQSRSGIPIIKGGTVVKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLLIERFEIPEPEPTEADKQALEKGEQPISADLKRFRKEYVQPVQLRVLNVFRHWVEHHYYDFERDLELLERLESFISSVRGKAMKKWVESIAKIIKRKKQAQANGVSHNITFESSPPPIEWHISRAGQFETFDLMTLHPIEIARQLTLLESDLYRKVQPSELVGSVWTKEDKEINSPNLLKMIRHTTNLTLWFEKCIVEAENFEERVAVLSRIVEILQVFQDLNNFNGVLEIVSAVNSVSVYRLDHTFEALQERKRRILDDAVELSQDHFKKYLVKLKSINPPCVPFFGIYLTNILKTEEGNSDFLKRKGKDLINFSKRRKVAEITGEIQQYQNQPYCLRTEPEIRRFFENLNPMGILCEKEFTDYLFNKSLEIEPRNCKQPPRFPRKSTFSLKSPGIRPNAGRHGSTSGTLRGHPTPLEREPYKISFSRIAETEPESTVSAPTSPNTPSTPPVSASSDHSVFLDVDLNSSCGSNTIFAPVLLPQSKTFFSSCGSLHKLSEEPLIPPPLPPRKKFDHDAPNSKGAMKSDDDPPAIPPRQPPPPKVKPRVPVLMGTFDGPVPSPPPPPPRDPLPDTPPPVPLRPPEHFINCPFNLQPPPLGHPHRDPDWLRDVSTCPNSPSTPPTTPSPRIPRRCHLLSSSHNNLAHPPAPPVPPRQNSSPHLPKLPPKTYKRELSHPPLYRLPLLENAETPQ
SIO_010081: Sos2
subclass of: SO_0000673
so part of: Sos2
location: join(823406..823492,848292..848417,854026..854157,856009..856173,866451..866657,870017..870160,873518..873628,877809..877907,888820..888944,889489..890144,890642..890723,892015..892137,895089..895192,898205..898427,902484..902603,902754..902916,906490..906607,908831..909003,911481..911597,913417..913678,915377..915418,917231..917340,918305..918814)
location: region:823406-918814:1
so has part: feature:823406-823492:1:exon
so has part: feature:848292-848417:1:exon
so has part: feature:854026-854157:1:exon
so has part: feature:856009-856173:1:exon
so has part: feature:866451-866657:1:exon
so has part: feature:870017-870160:1:exon
so has part: feature:873518-873628:1:exon
so has part: feature:877809-877907:1:exon
so has part: feature:888820-888944:1:exon
so has part: feature:889489-890144:1:exon
so has part: feature:890642-890723:1:exon
so has part: feature:892015-892137:1:exon
so has part: feature:895089-895192:1:exon
so has part: feature:898205-898427:1:exon
so has part: feature:902484-902603:1:exon
so has part: feature:902754-902916:1:exon
so has part: feature:906490-906607:1:exon
so has part: feature:908831-909003:1:exon
so has part: feature:911481-911597:1:exon
so has part: feature:913417-913678:1:exon
so has part: feature:915377-915418:1:exon
so has part: feature:917231-917340:1:exon
so has part: feature:918305-918814:1:exon

XP_034369709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:823406-823492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848292-848417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854026-854157:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856009-856173:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866451-866657:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870017-870160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:873518-873628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:877809-877907:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888820-888944:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889489-890144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:890642-890723:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892015-892137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:895089-895192:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898205-898427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902484-902603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:902754-902916:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906490-906607:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:908831-909003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:911481-911597:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:913417-913678:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:915377-915418:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:917231-917340:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:918305-918814:1:exon

LOC117717308
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717308
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 828462..829043
location: region:828462-829043:1
so has part: feature:828462-829043:1:exon

117717308
type: Gene
SIO_000068: ncbigene

position:828462:1
position: 828462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829043:1
position: 829043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828462-829043:1:exon

LOC117717308
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717308
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC117717308
subclass of: SO_0000673
so part of: LOC117717308
location: 828462..829043
location: region:828462-829043:1
so has part: feature:828462-829043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:828462-829043:1:exon

LOC117716783
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(920234..942883)
location: region:920234-942883:-1
so has part: feature:920234-942883:-1:exon
subclass of: SO_0000011

117716783
type: Gene
SIO_000068: ncbigene

position:920234:-1
position: 920234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942883:-1
position: 942883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920234-942883:-1:exon

LOC117716783
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: lncRNA
gene: LOC117716783
product: uncharacterized LOC117716783
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004607824.1
SIO_010081: LOC117716783
subclass of: SO_0000673
so part of: LOC117716783
location: complement(join(920234..920271,942845..942883))
location: region:920234-942883:-1
so has part: feature:942845-942883:-1:exon
so has part: feature:920234-920271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:942845-942883:-1:exon

position:942845:-1
position: 942845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:920234-920271:-1:exon

position:920271:-1
position: 920271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Vcpkmt
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Vcpkmt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 920810..931209
location: region:920810-931209:1
so has part: feature:920810-931209:1:exon
subclass of: SO_0000010

117716782
type: Gene
SIO_000068: ncbigene

position:920810:1
position: 920810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931209:1
position: 931209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920810-931209:1:exon

Vcpkmt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Vcpkmt
product: valosin containing protein lysine methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 long SRA read, 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034513819.1
SIO_010081: Vcpkmt
subclass of: SO_0000673
so part of: Vcpkmt
location: join(920810..921190,921281..921391,921559..921628,922836..922955,924377..924481,926917..931209)
location: region:920810-931209:1
so has part: feature:920810-921190:1:exon
so has part: feature:921281-921391:1:exon
so has part: feature:921559-921628:1:exon
so has part: feature:922836-922955:1:exon
so has part: feature:924377-924481:1:exon
so has part: feature:926917-931209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:920810-921190:1:exon

position:921190:1
position: 921190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:921281-921391:1:exon

position:921281:1
position: 921281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921391:1
position: 921391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:921559-921628:1:exon

position:921559:1
position: 921559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921628:1
position: 921628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:922836-922955:1:exon

position:922836:1
position: 922836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922955:1
position: 922955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:924377-924481:1:exon

position:924377:1
position: 924377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924481:1
position: 924481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:926917-931209:1:exon

position:926917:1
position: 926917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Vcpkmt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Vcpkmt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-lysine methyltransferase METTL21D isoform X1
translation: MRFGQSLCLWEVWGLRGRDVTTCRSLWRAGVEMAAAVEPGVEDPLWSFVRVLEKRDGTVLRLQQYGSGGVGCVVWDAAIVLSKYLETPGFSGDGAHALSRRSVLELGSGTGAVGLMAATLGADVIVTDLEELQDLLKMNINMNKHLVTGSVQAKVLKWGEDIEDLTSPDYILMADCIYYEASLEPLLKTLKDLSGSETCIICCYEQRTMGKNPEIEKKYFELLKLDFDFEEIPLDKHDEEYRSEDIHIVYIRKKKPKPPS
SIO_010081: Vcpkmt
subclass of: SO_0000673
so part of: Vcpkmt
location: join(920829..921190,921281..921391,921559..921628,922836..922955,924377..924481,926917..926931)
location: region:920829-926931:1
so has part: feature:920829-921190:1:exon
so has part: feature:921281-921391:1:exon
so has part: feature:921559-921628:1:exon
so has part: feature:922836-922955:1:exon
so has part: feature:924377-924481:1:exon
so has part: feature:926917-926931:1:exon

XP_034369710.1
type: Protein
SIO_000068: ncbiprotein

position:920829:1
position: 920829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926931:1
position: 926931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920829-921190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:921281-921391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921559-921628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:922836-922955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:924377-924481:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:926917-926931:1:exon

Vcpkmt
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Vcpkmt
product: valosin containing protein lysine methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034513820.1
SIO_010081: Vcpkmt
subclass of: SO_0000673
so part of: Vcpkmt
location: join(920880..921190,921281..921391,921559..921628,922836..922955,924377..924548,926917..931199)
location: region:920880-931199:1
so has part: feature:920880-921190:1:exon
so has part: feature:921281-921391:1:exon
so has part: feature:921559-921628:1:exon
so has part: feature:922836-922955:1:exon
so has part: feature:924377-924548:1:exon
so has part: feature:926917-931199:1:exon

position:920880:1
position: 920880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931199:1
position: 931199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920880-921190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:921281-921391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921559-921628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:922836-922955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:924377-924548:1:exon

position:924548:1
position: 924548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:926917-931199:1:exon

Vcpkmt
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Vcpkmt
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-lysine methyltransferase METTL21D isoform X2
translation: MAAAVEPGVEDPLWSFVRVLEKRDGTVLRLQQYGSGGVGCVVWDAAIVLSKYLETPGFSGDGAHALSRRSVLELGSGTGAVGLMAATLGADVIVTDLEELQDLLKMNINMNKHLVTGSVQAKVLKWGEDIEDLTSPDYILMADCIYYEASLEPLLKTLKDLSGSETCIICCYEQRTMGKNPEIEKKYFELLKLDFDFEEIPLDKHDEEYRSEDIHIVYIRKKKPVRAFTVLHI
SIO_010081: Vcpkmt
subclass of: SO_0000673
so part of: Vcpkmt
location: join(920925..921190,921281..921391,921559..921628,922836..922955,924377..924511)
location: region:920925-924511:1
so has part: feature:920925-921190:1:exon
so has part: feature:921281-921391:1:exon
so has part: feature:921559-921628:1:exon
so has part: feature:922836-922955:1:exon
so has part: feature:924377-924511:1:exon

XP_034369711.1
type: Protein
SIO_000068: ncbiprotein

position:920925:1
position: 920925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924511:1
position: 924511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920925-921190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:921281-921391:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921559-921628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:922836-922955:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:924377-924511:1:exon

LOC117717263
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717263
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 990810..992044
location: region:990810-992044:1
so has part: feature:990810-992044:1:exon

117717263
type: Gene
SIO_000068: ncbigene

position:990810:1
position: 990810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992044:1
position: 992044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990810-992044:1:exon

LOC117717263
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: LOC117717263
product: splicing factor 3B subunit 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 21% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_004607874.1
SIO_010081: LOC117717263
so part of: LOC117717263
location: 990810..992044
location: region:990810-992044:1
so has part: feature:990810-992044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:990810-992044:1:exon

LOC117717318
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1038630..1039507
location: region:1038630-1039507:1
so has part: feature:1038630-1039507:1:exon

117717318
type: Gene
SIO_000068: ncbigene

position:1038630:1
position: 1038630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039507:1
position: 1039507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038630-1039507:1:exon

LOC117717318
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717318
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 50% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717318
subclass of: SO_0000673
so part of: LOC117717318
location: 1038630..1039507
location: region:1038630-1039507:1
so has part: feature:1038630-1039507:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1038630-1039507:1:exon

Arf6
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Arf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1126930..1130776)
location: region:1126930-1130776:-1
so has part: feature:1126930-1130776:-1:exon
subclass of: SO_0000010

117716950
type: Gene
SIO_000068: ncbigene

position:1126930:-1
position: 1126930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130776:-1
position: 1130776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1126930-1130776:-1:exon

Arf6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Arf6
product: ADP ribosylation factor 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 mRNAs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514093.1
SIO_010081: Arf6
subclass of: SO_0000673
so part of: Arf6
location: complement(join(1126930..1130562,1130661..1130776))
location: region:1126930-1130776:-1
so has part: feature:1130661-1130776:-1:exon
so has part: feature:1126930-1130562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1130661-1130776:-1:exon

position:1130661:-1
position: 1130661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1126930-1130562:-1:exon

position:1130562:-1
position: 1130562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Arf6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Arf6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor 6
translation: MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS
SIO_010081: Arf6
subclass of: SO_0000673
so part of: Arf6
location: complement(1129597..1130124)
location: region:1129597-1130124:-1
so has part: feature:1129597-1130124:-1:exon

XP_034369984.1
type: Protein
SIO_000068: ncbiprotein

position:1129597:-1
position: 1129597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1130124:-1
position: 1130124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129597-1130124:-1:exon

Nemf
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Nemf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1147695..1202903
location: region:1147695-1202903:1
so has part: feature:1147695-1202903:1:exon
subclass of: SO_0000010

117716734
type: Gene
SIO_000068: ncbigene

position:1147695:1
position: 1147695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202903:1
position: 1202903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147695-1202903:1:exon

Nemf
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nemf
product: nuclear export mediator factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 12 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513756.1
SIO_010081: Nemf
subclass of: SO_0000673
so part of: Nemf
location: join(1147695..1147833,1148535..1148603,1148762..1148864,1149984..1150109,1152980..1153128,1154700..1154767,1157961..1158047,1160182..1160255,1161609..1161679,1161758..1161833,1162551..1162613,1171997..1172074,1172160..1172368,1172566..1172745,1174005..1174068,1175339..1175427,1180798..1180901,1181657..1181719,1185070..1185182,1189018..1189075,1189507..1189565,1189642..1189762,1191269..1191518,1193063..1193105,1193208..1193257,1196387..1196540,1197663..1197740,1198059..1198253,1200131..1200163,1201755..1201855,1201964..1202007,1202091..1202170,1202361..1202903)
location: region:1147695-1202903:1
so has part: feature:1147695-1147833:1:exon
so has part: feature:1148535-1148603:1:exon
so has part: feature:1148762-1148864:1:exon
so has part: feature:1149984-1150109:1:exon
so has part: feature:1152980-1153128:1:exon
so has part: feature:1154700-1154767:1:exon
so has part: feature:1157961-1158047:1:exon
so has part: feature:1160182-1160255:1:exon
so has part: feature:1161609-1161679:1:exon
so has part: feature:1161758-1161833:1:exon
so has part: feature:1162551-1162613:1:exon
so has part: feature:1171997-1172074:1:exon
so has part: feature:1172160-1172368:1:exon
so has part: feature:1172566-1172745:1:exon
so has part: feature:1174005-1174068:1:exon
so has part: feature:1175339-1175427:1:exon
so has part: feature:1180798-1180901:1:exon
so has part: feature:1181657-1181719:1:exon
so has part: feature:1185070-1185182:1:exon
so has part: feature:1189018-1189075:1:exon
so has part: feature:1189507-1189565:1:exon
so has part: feature:1189642-1189762:1:exon
so has part: feature:1191269-1191518:1:exon
so has part: feature:1193063-1193105:1:exon
so has part: feature:1193208-1193257:1:exon
so has part: feature:1196387-1196540:1:exon
so has part: feature:1197663-1197740:1:exon
so has part: feature:1198059-1198253:1:exon
so has part: feature:1200131-1200163:1:exon
so has part: feature:1201755-1201855:1:exon
so has part: feature:1201964-1202007:1:exon
so has part: feature:1202091-1202170:1:exon
so has part: feature:1202361-1202903:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147695-1147833:1:exon

position:1147833:1
position: 1147833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1148535-1148603:1:exon

position:1148535:1
position: 1148535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148603:1
position: 1148603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1148762-1148864:1:exon

position:1148762:1
position: 1148762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148864:1
position: 1148864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1149984-1150109:1:exon

position:1149984:1
position: 1149984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150109:1
position: 1150109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1152980-1153128:1:exon

position:1152980:1
position: 1152980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153128:1
position: 1153128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1154700-1154767:1:exon

position:1154700:1
position: 1154700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154767:1
position: 1154767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1157961-1158047:1:exon

position:1157961:1
position: 1157961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158047:1
position: 1158047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1160182-1160255:1:exon

position:1160182:1
position: 1160182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160255:1
position: 1160255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1161609-1161679:1:exon

position:1161609:1
position: 1161609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161679:1
position: 1161679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1161758-1161833:1:exon

position:1161758:1
position: 1161758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161833:1
position: 1161833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1162551-1162613:1:exon

position:1162551:1
position: 1162551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162613:1
position: 1162613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1171997-1172074:1:exon

position:1171997:1
position: 1171997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172074:1
position: 1172074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1172160-1172368:1:exon

position:1172160:1
position: 1172160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172368:1
position: 1172368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1172566-1172745:1:exon

position:1172566:1
position: 1172566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172745:1
position: 1172745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1174005-1174068:1:exon

position:1174005:1
position: 1174005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174068:1
position: 1174068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1175339-1175427:1:exon

position:1175339:1
position: 1175339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175427:1
position: 1175427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1180798-1180901:1:exon

position:1180798:1
position: 1180798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180901:1
position: 1180901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1181657-1181719:1:exon

position:1181657:1
position: 1181657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181719:1
position: 1181719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1185070-1185182:1:exon

position:1185070:1
position: 1185070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185182:1
position: 1185182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1189018-1189075:1:exon

position:1189018:1
position: 1189018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189075:1
position: 1189075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1189507-1189565:1:exon

position:1189507:1
position: 1189507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189565:1
position: 1189565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1189642-1189762:1:exon

position:1189642:1
position: 1189642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189762:1
position: 1189762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1191269-1191518:1:exon

position:1191269:1
position: 1191269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1191518:1
position: 1191518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1193063-1193105:1:exon

position:1193063:1
position: 1193063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193105:1
position: 1193105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1193208-1193257:1:exon

position:1193208:1
position: 1193208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193257:1
position: 1193257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1196387-1196540:1:exon

position:1196387:1
position: 1196387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196540:1
position: 1196540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1197663-1197740:1:exon

position:1197663:1
position: 1197663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197740:1
position: 1197740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1198059-1198253:1:exon

position:1198059:1
position: 1198059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198253:1
position: 1198253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1200131-1200163:1:exon

position:1200131:1
position: 1200131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1200163:1
position: 1200163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1201755-1201855:1:exon

position:1201755:1
position: 1201755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201855:1
position: 1201855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1201964-1202007:1:exon

position:1201964:1
position: 1201964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202007:1
position: 1202007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1202091-1202170:1:exon

position:1202091:1
position: 1202091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202170:1
position: 1202170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1202361-1202903:1:exon

position:1202361:1
position: 1202361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nemf
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nemf
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear export mediator factor NEMF
translation: MKSRFSTVDLRAVLAELNASLLGMRVNNVYDVDNKTYLIRLQKPDFKATLLLESGIRIHTTEFEWPKNMMPSSFAMKCRKHLKSRRLVSAQQLGMDRIVDFQFGSDEAAYHLIVELYDRGNIVLTDYEYLILNILRFRTDETDDVKFAVRERYPIDHARAAEPLLTLERLTDVIASAPRGELLKRVLNPLLPYGPALIEHCLIENGFSGNVKVDEKLESKDIEKILVCVQRAEDYLKKTSNFNGKGYIIQKREVKPSLDANKPAEDIFTYEEFHPFLFSQHLQCPYIEFESFDKAVDEFYSKIEGQKIDLKALQQEKQALKKLDNVRKDHENRLEALQQAQEIDKLKGELIEMNLQIVDRAIQVVRSALANQIDWTEIGVIVKEAQAQGDPVASAIKELKLQTNHVTMLLRNPYLLSEEEDGDASIESSDAEAPKGKKKKQKNKQLQKPQKNKPLLVDVDLSLSAYANAKKYYDHKRYAAKKTQRTVEAAEKAFKSAEKKTKQTLKEVQTVTSIQKARKVYWFEKFLWFISSENYLIIGGRDQQQNEIIVKRYLTPGDIYVHADLHGATSCVIKNPTGEPIPPRTLTEAGTMALCYSAAWDARVITSAWWVYHHQVSKTAPTGEYLTTGSFMIRGKKNFLPPSYLMMGFSFLFKVDESCVWRHRGERKVRVQDEDMETLTSCTSELMSEEMEQLEGGDSSEEETEELHGTPGEVELMTQVDQEDTAVHSGRDELSSDDGEAKAVRKDQEPVGEMKEEEEETFEYPDTTIDLSHLQSQRPLQKLAPREESLNSNDSKSQSRRHLSAKERREMKKKKLPCDSGDLEVMEEKDKEKESAVHTEAYQNTGKPVAAGQPMKRGQKSKMKKMKEKYKDQDDEDRELIMKLLASAGSNKEEKGKKGRKGKAKDEPVKKPPQKPRGGHRVLDVVKETPALQVLAHDLQDLAVDDPHDDKEEHDLDQQGNEENLFDSLTGQPHPEDVLMFAIPICAPYTIMTNYKYKVKLTPGVQKKGKAAKTALNSFMHSKEATAREKDLFRSVKDTDLSRNIPGKVKVSAPNLLHVKRK
SIO_010081: Nemf
subclass of: SO_0000673
so part of: Nemf
location: join(1147775..1147833,1148535..1148603,1148762..1148864,1149984..1150109,1152980..1153128,1154700..1154767,1157961..1158047,1160182..1160255,1161609..1161679,1161758..1161833,1162551..1162613,1171997..1172074,1172160..1172368,1172566..1172745,1174005..1174068,1175339..1175427,1180798..1180901,1181657..1181719,1185070..1185182,1189018..1189075,1189507..1189565,1189642..1189762,1191269..1191518,1193063..1193105,1193208..1193257,1196387..1196540,1197663..1197740,1198059..1198253,1200131..1200163,1201755..1201855,1201964..1202007,1202091..1202170,1202361..1202438)
location: region:1147775-1202438:1
so has part: feature:1147775-1147833:1:exon
so has part: feature:1148535-1148603:1:exon
so has part: feature:1148762-1148864:1:exon
so has part: feature:1149984-1150109:1:exon
so has part: feature:1152980-1153128:1:exon
so has part: feature:1154700-1154767:1:exon
so has part: feature:1157961-1158047:1:exon
so has part: feature:1160182-1160255:1:exon
so has part: feature:1161609-1161679:1:exon
so has part: feature:1161758-1161833:1:exon
so has part: feature:1162551-1162613:1:exon
so has part: feature:1171997-1172074:1:exon
so has part: feature:1172160-1172368:1:exon
so has part: feature:1172566-1172745:1:exon
so has part: feature:1174005-1174068:1:exon
so has part: feature:1175339-1175427:1:exon
so has part: feature:1180798-1180901:1:exon
so has part: feature:1181657-1181719:1:exon
so has part: feature:1185070-1185182:1:exon
so has part: feature:1189018-1189075:1:exon
so has part: feature:1189507-1189565:1:exon
so has part: feature:1189642-1189762:1:exon
so has part: feature:1191269-1191518:1:exon
so has part: feature:1193063-1193105:1:exon
so has part: feature:1193208-1193257:1:exon
so has part: feature:1196387-1196540:1:exon
so has part: feature:1197663-1197740:1:exon
so has part: feature:1198059-1198253:1:exon
so has part: feature:1200131-1200163:1:exon
so has part: feature:1201755-1201855:1:exon
so has part: feature:1201964-1202007:1:exon
so has part: feature:1202091-1202170:1:exon
so has part: feature:1202361-1202438:1:exon

XP_034369647.1
type: Protein
SIO_000068: ncbiprotein

position:1147775:1
position: 1147775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202438:1
position: 1202438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147775-1147833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1148535-1148603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1148762-1148864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1149984-1150109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152980-1153128:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1154700-1154767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1157961-1158047:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1160182-1160255:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1161609-1161679:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1161758-1161833:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1162551-1162613:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1171997-1172074:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1172160-1172368:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1172566-1172745:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1174005-1174068:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1175339-1175427:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1180798-1180901:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1181657-1181719:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1185070-1185182:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1189018-1189075:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1189507-1189565:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1189642-1189762:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1191269-1191518:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1193063-1193105:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1193208-1193257:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1196387-1196540:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1197663-1197740:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1198059-1198253:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1200131-1200163:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1201755-1201855:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1201964-1202007:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1202091-1202170:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1202361-1202438:1:exon

Klhdc2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Klhdc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1204010..1217917)
location: region:1204010-1217917:-1
so has part: feature:1204010-1217917:-1:exon
subclass of: SO_0000010

117716735
type: Gene
SIO_000068: ncbigene

position:1204010:-1
position: 1204010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217917:-1
position: 1217917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204010-1217917:-1:exon

Klhdc2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Klhdc2
product: kelch domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 6 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513757.1
SIO_010081: Klhdc2
subclass of: SO_0000673
so part of: Klhdc2
location: complement(join(1204010..1204319,1204433..1204485,1205431..1205518,1206648..1206720,1207062..1207171,1208289..1208347,1208421..1208501,1209730..1209813,1210218..1210299,1210577..1210692,1212407..1212524,1214741..1214820,1217456..1217917))
location: region:1204010-1217917:-1
so has part: feature:1217456-1217917:-1:exon
so has part: feature:1214741-1214820:-1:exon
so has part: feature:1212407-1212524:-1:exon
so has part: feature:1210577-1210692:-1:exon
so has part: feature:1210218-1210299:-1:exon
so has part: feature:1209730-1209813:-1:exon
so has part: feature:1208421-1208501:-1:exon
so has part: feature:1208289-1208347:-1:exon
so has part: feature:1207062-1207171:-1:exon
so has part: feature:1206648-1206720:-1:exon
so has part: feature:1205431-1205518:-1:exon
so has part: feature:1204433-1204485:-1:exon
so has part: feature:1204010-1204319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1217456-1217917:-1:exon

position:1217456:-1
position: 1217456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1214741-1214820:-1:exon

position:1214741:-1
position: 1214741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214820:-1
position: 1214820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1212407-1212524:-1:exon

position:1212407:-1
position: 1212407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212524:-1
position: 1212524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1210577-1210692:-1:exon

position:1210577:-1
position: 1210577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210692:-1
position: 1210692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1210218-1210299:-1:exon

position:1210218:-1
position: 1210218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210299:-1
position: 1210299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1209730-1209813:-1:exon

position:1209730:-1
position: 1209730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209813:-1
position: 1209813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1208421-1208501:-1:exon

position:1208421:-1
position: 1208421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208501:-1
position: 1208501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1208289-1208347:-1:exon

position:1208289:-1
position: 1208289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208347:-1
position: 1208347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1207062-1207171:-1:exon

position:1207062:-1
position: 1207062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207171:-1
position: 1207171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1206648-1206720:-1:exon

position:1206648:-1
position: 1206648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206720:-1
position: 1206720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1205431-1205518:-1:exon

position:1205431:-1
position: 1205431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205518:-1
position: 1205518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1204433-1204485:-1:exon

position:1204433:-1
position: 1204433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204485:-1
position: 1204485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1204010-1204319:-1:exon

position:1204319:-1
position: 1204319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Klhdc2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Klhdc2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch domain-containing protein 2
translation: MADGNEDARAEDLPGPAFENYEAMELACPAERSGHVAVSDGRHMFVWGGYKSNQVRGLYDFYLPREELWIYNMETGRWKKINTEGDVPPSMSGSCAVCVDRVLYLFGGHHSRGNTNKFYMLDSRSADRGLQWERIDCQGIPPSSKDKLGVWVYKNKLIFFGGYGYLPEDKVLGTFEFDETSFWNSSHPRGWNDHVHILDTETFAWSQPITTGKAPSPRAAHACATVGNKGFVFGGRYRDARMNDLHYLNLDTWEWNELIPQGVCPVGRSWHSLTPVSSDHLFLFGGFTTEKQPLSDAWTYCISKNEWIQFNHPYVEKPRLWHTACASDEGEVIVFGGCANNLLVHHRAAHSNEVLIFSVQPKSLVRLSLEAVICFKEMLANSWSCLPKHLLHSVNQRFGSNNTSGS
SIO_010081: Klhdc2
subclass of: SO_0000673
so part of: Klhdc2
location: complement(join(1204196..1204319,1204433..1204485,1205431..1205518,1206648..1206720,1207062..1207171,1208289..1208347,1208421..1208501,1209730..1209813,1210218..1210299,1210577..1210692,1212407..1212524,1214741..1214820,1217456..1217608))
location: region:1204196-1217608:-1
so has part: feature:1217456-1217608:-1:exon
so has part: feature:1214741-1214820:-1:exon
so has part: feature:1212407-1212524:-1:exon
so has part: feature:1210577-1210692:-1:exon
so has part: feature:1210218-1210299:-1:exon
so has part: feature:1209730-1209813:-1:exon
so has part: feature:1208421-1208501:-1:exon
so has part: feature:1208289-1208347:-1:exon
so has part: feature:1207062-1207171:-1:exon
so has part: feature:1206648-1206720:-1:exon
so has part: feature:1205431-1205518:-1:exon
so has part: feature:1204433-1204485:-1:exon
so has part: feature:1204196-1204319:-1:exon

XP_034369648.1
type: Protein
SIO_000068: ncbiprotein

position:1204196:-1
position: 1204196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217608:-1
position: 1217608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217456-1217608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1214741-1214820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1212407-1212524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1210577-1210692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1210218-1210299:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1209730-1209813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1208421-1208501:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1208289-1208347:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1207062-1207171:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1206648-1206720:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1205431-1205518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204433-1204485:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1204196-1204319:-1:exon

Klhdc1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Klhdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1229751..1267499)
location: region:1229751-1267499:-1
so has part: feature:1229751-1267499:-1:exon
subclass of: SO_0000010

117717350
type: Gene
SIO_000068: ncbigene

position:1229751:-1
position: 1229751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267499:-1
position: 1267499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229751-1267499:-1:exon

Klhdc1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Klhdc1
product: kelch domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 2 long SRA reads, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034514665.1
SIO_010081: Klhdc1
subclass of: SO_0000673
so part of: Klhdc1
location: complement(join(1229751..1231275,1239784..1239836,1242898..1242982,1247376..1247448,1249851..1249963,1250823..1250881,1251317..1251400,1253090..1253173,1255801..1255879,1257239..1257357,1257785..1257902,1258458..1258528,1267324..1267499))
location: region:1229751-1267499:-1
so has part: feature:1267324-1267499:-1:exon
so has part: feature:1258458-1258528:-1:exon
so has part: feature:1257785-1257902:-1:exon
so has part: feature:1257239-1257357:-1:exon
so has part: feature:1255801-1255879:-1:exon
so has part: feature:1253090-1253173:-1:exon
so has part: feature:1251317-1251400:-1:exon
so has part: feature:1250823-1250881:-1:exon
so has part: feature:1249851-1249963:-1:exon
so has part: feature:1247376-1247448:-1:exon
so has part: feature:1242898-1242982:-1:exon
so has part: feature:1239784-1239836:-1:exon
so has part: feature:1229751-1231275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1267324-1267499:-1:exon

position:1267324:-1
position: 1267324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1258458-1258528:-1:exon

position:1258458:-1
position: 1258458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1258528:-1
position: 1258528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1257785-1257902:-1:exon

position:1257785:-1
position: 1257785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257902:-1
position: 1257902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1257239-1257357:-1:exon

position:1257239:-1
position: 1257239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257357:-1
position: 1257357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1255801-1255879:-1:exon

position:1255801:-1
position: 1255801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255879:-1
position: 1255879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1253090-1253173:-1:exon

position:1253090:-1
position: 1253090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253173:-1
position: 1253173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1251317-1251400:-1:exon

position:1251317:-1
position: 1251317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251400:-1
position: 1251400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1250823-1250881:-1:exon

position:1250823:-1
position: 1250823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250881:-1
position: 1250881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1249851-1249963:-1:exon

position:1249851:-1
position: 1249851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249963:-1
position: 1249963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1247376-1247448:-1:exon

position:1247376:-1
position: 1247376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247448:-1
position: 1247448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1242898-1242982:-1:exon

position:1242898:-1
position: 1242898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242982:-1
position: 1242982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1239784-1239836:-1:exon

position:1239784:-1
position: 1239784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239836:-1
position: 1239836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1229751-1231275:-1:exon

position:1231275:-1
position: 1231275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Klhdc1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Klhdc1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch domain-containing protein 1
translation: MADSQAFCVAEERSGHCAVVDGHFLYVWGGYVSIEDNEVYLPNDEMWTYDVDSGLWKMHLMEGELPPSMSGSCGACINGRLYVFGGYDDKGYSNRLYFVNLRTRDGTYIWEKIIKFDGQPPTPRDKLSCWVYKDRLIYFGGYGYRRHSELQECFDVHDASWEEQIFWGWHNDVHVFDTKTRTWSQPEIKGGVPPQPRAAHSCAVLGNKGYVFGGRVLQTRMNDLHYLNLDTWVWSGRISVNGESPKHRSWHTLTAIADDKLFLFGGLSADNIPLSDGWIHNIITNCWKQLRHLPYTRPRLWHTACLGKENEIMVFGGSKDNLLFLDTGHCNDLLIFQTQPYSLLRSCLDCIGKNAIILKSQISLLPPKLLQQVLKKITFWTAANYRKEQRIRKEETENKQPRVSSC
SIO_010081: Klhdc1
subclass of: SO_0000673
so part of: Klhdc1
location: complement(join(1231089..1231275,1239784..1239836,1242898..1242982,1247376..1247448,1249851..1249963,1250823..1250881,1251317..1251400,1253090..1253173,1255801..1255879,1257239..1257357,1257785..1257902,1258458..1258528,1267324..1267419))
location: region:1231089-1267419:-1
so has part: feature:1267324-1267419:-1:exon
so has part: feature:1258458-1258528:-1:exon
so has part: feature:1257785-1257902:-1:exon
so has part: feature:1257239-1257357:-1:exon
so has part: feature:1255801-1255879:-1:exon
so has part: feature:1253090-1253173:-1:exon
so has part: feature:1251317-1251400:-1:exon
so has part: feature:1250823-1250881:-1:exon
so has part: feature:1249851-1249963:-1:exon
so has part: feature:1247376-1247448:-1:exon
so has part: feature:1242898-1242982:-1:exon
so has part: feature:1239784-1239836:-1:exon
so has part: feature:1231089-1231275:-1:exon

XP_034370556.1
type: Protein
SIO_000068: ncbiprotein

position:1231089:-1
position: 1231089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1267419:-1
position: 1267419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267324-1267419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1258458-1258528:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1257785-1257902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1257239-1257357:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1255801-1255879:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1253090-1253173:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1251317-1251400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1250823-1250881:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1249851-1249963:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1247376-1247448:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1242898-1242982:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1239784-1239836:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1231089-1231275:-1:exon

Pole2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Pole2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1278477..1303189
location: region:1278477-1303189:1
so has part: feature:1278477-1303189:1:exon
subclass of: SO_0000010

117716946
type: Gene
SIO_000068: ncbigene

position:1278477:1
position: 1278477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303189:1
position: 1303189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278477-1303189:1:exon

Pole2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pole2
product: DNA polymerase epsilon 2, accessory subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034514083.1
SIO_010081: Pole2
subclass of: SO_0000673
so part of: Pole2
location: join(1278477..1278563,1280350..1280450,1283223..1283298,1283926..1284003,1284389..1284482,1290960..1291034,1292601..1292684,1293254..1293310,1293867..1293915,1294472..1294544,1295813..1295985,1296328..1296417,1296744..1296798,1297861..1297920,1298006..1298083,1299506..1299614,1300748..1300924,1302041..1302108,1303082..1303189)
location: region:1278477-1303189:1
so has part: feature:1278477-1278563:1:exon
so has part: feature:1280350-1280450:1:exon
so has part: feature:1283223-1283298:1:exon
so has part: feature:1283926-1284003:1:exon
so has part: feature:1284389-1284482:1:exon
so has part: feature:1290960-1291034:1:exon
so has part: feature:1292601-1292684:1:exon
so has part: feature:1293254-1293310:1:exon
so has part: feature:1293867-1293915:1:exon
so has part: feature:1294472-1294544:1:exon
so has part: feature:1295813-1295985:1:exon
so has part: feature:1296328-1296417:1:exon
so has part: feature:1296744-1296798:1:exon
so has part: feature:1297861-1297920:1:exon
so has part: feature:1298006-1298083:1:exon
so has part: feature:1299506-1299614:1:exon
so has part: feature:1300748-1300924:1:exon
so has part: feature:1302041-1302108:1:exon
so has part: feature:1303082-1303189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1278477-1278563:1:exon

position:1278563:1
position: 1278563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1280350-1280450:1:exon

position:1280350:1
position: 1280350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280450:1
position: 1280450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283223-1283298:1:exon

position:1283223:1
position: 1283223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283298:1
position: 1283298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1283926-1284003:1:exon

position:1283926:1
position: 1283926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284003:1
position: 1284003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1284389-1284482:1:exon

position:1284389:1
position: 1284389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1284482:1
position: 1284482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1290960-1291034:1:exon

position:1290960:1
position: 1290960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291034:1
position: 1291034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1292601-1292684:1:exon

position:1292601:1
position: 1292601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292684:1
position: 1292684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1293254-1293310:1:exon

position:1293254:1
position: 1293254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293310:1
position: 1293310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1293867-1293915:1:exon

position:1293867:1
position: 1293867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293915:1
position: 1293915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1294472-1294544:1:exon

position:1294472:1
position: 1294472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294544:1
position: 1294544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1295813-1295985:1:exon

position:1295813:1
position: 1295813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295985:1
position: 1295985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1296328-1296417:1:exon

position:1296328:1
position: 1296328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296417:1
position: 1296417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1296744-1296798:1:exon

position:1296744:1
position: 1296744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296798:1
position: 1296798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1297861-1297920:1:exon

position:1297861:1
position: 1297861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297920:1
position: 1297920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1298006-1298083:1:exon

position:1298006:1
position: 1298006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298083:1
position: 1298083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1299506-1299614:1:exon

position:1299506:1
position: 1299506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299614:1
position: 1299614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1300748-1300924:1:exon

position:1300748:1
position: 1300748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300924:1
position: 1300924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1302041-1302108:1:exon

position:1302041:1
position: 1302041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302108:1
position: 1302108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1303082-1303189:1:exon

position:1303082:1
position: 1303082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Pole2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pole2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase epsilon subunit 2 isoform X1
translation: MAPERLRSRTVSAFKLRGLLLRSEATKYLTDALQSVTELELEESLEKIIDAVEKQPLSSNMIERSVVEAAVQECSQSVDETIEHIFNIIGAFDIPHFIYNSERKKFLPLSMTNHAAPTLFGTAKDKAELYRERYTILHQRTHRHELFTPPVIGSQPEESGSKFQLKTIETLLGSTSRVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEGWFEDQVFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTSAKLRQLEDENKDAMFVIVSDVWLDQVQVLEKLHIMFSGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKSLADIICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQYCTQEIIIFREDLVNKMCRNCVRFPSSSLDIPTHFVKTILSQGHLAPLPLYVCPVYWAYDYTLRVYPVPDLLVIADKYDPFTVTNTECLCINPGSFPRSGFAFKVFYPSGKTVEDSKLQGF
SIO_010081: Pole2
subclass of: SO_0000673
so part of: Pole2
location: join(1278496..1278563,1280350..1280450,1283223..1283298,1283926..1284003,1284389..1284482,1290960..1291034,1292601..1292684,1293254..1293310,1293867..1293915,1294472..1294544,1295813..1295985,1296328..1296417,1296744..1296798,1297861..1297920,1298006..1298083,1299506..1299614,1300748..1300924,1302041..1302108,1303082..1303100)
location: region:1278496-1303100:1
so has part: feature:1278496-1278563:1:exon
so has part: feature:1280350-1280450:1:exon
so has part: feature:1283223-1283298:1:exon
so has part: feature:1283926-1284003:1:exon
so has part: feature:1284389-1284482:1:exon
so has part: feature:1290960-1291034:1:exon
so has part: feature:1292601-1292684:1:exon
so has part: feature:1293254-1293310:1:exon
so has part: feature:1293867-1293915:1:exon
so has part: feature:1294472-1294544:1:exon
so has part: feature:1295813-1295985:1:exon
so has part: feature:1296328-1296417:1:exon
so has part: feature:1296744-1296798:1:exon
so has part: feature:1297861-1297920:1:exon
so has part: feature:1298006-1298083:1:exon
so has part: feature:1299506-1299614:1:exon
so has part: feature:1300748-1300924:1:exon
so has part: feature:1302041-1302108:1:exon
so has part: feature:1303082-1303100:1:exon

XP_034369974.1
type: Protein
SIO_000068: ncbiprotein

position:1278496:1
position: 1278496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303100:1
position: 1303100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278496-1278563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1280350-1280450:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283223-1283298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283926-1284003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284389-1284482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290960-1291034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1292601-1292684:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1293254-1293310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1293867-1293915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1294472-1294544:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1295813-1295985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1296328-1296417:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296744-1296798:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1297861-1297920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1298006-1298083:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1299506-1299614:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1300748-1300924:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1302041-1302108:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1303082-1303100:1:exon

Pole2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Pole2
product: DNA polymerase epsilon 2, accessory subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034514084.1
SIO_010081: Pole2
subclass of: SO_0000673
so part of: Pole2
location: join(1278552..1278563,1280355..1280450,1283223..1283298,1283926..1284003,1284389..1284482,1290960..1291034,1292601..1292684,1293254..1293310,1293867..1293915,1294472..1294544,1295813..1295985,1296328..1296417,1296744..1296798,1297861..1297920,1298006..1298083,1299506..1299614,1300748..1300924,1302041..1302108,1303082..1303189)
location: region:1278552-1303189:1
so has part: feature:1278552-1278563:1:exon
so has part: feature:1280355-1280450:1:exon
so has part: feature:1283223-1283298:1:exon
so has part: feature:1283926-1284003:1:exon
so has part: feature:1284389-1284482:1:exon
so has part: feature:1290960-1291034:1:exon
so has part: feature:1292601-1292684:1:exon
so has part: feature:1293254-1293310:1:exon
so has part: feature:1293867-1293915:1:exon
so has part: feature:1294472-1294544:1:exon
so has part: feature:1295813-1295985:1:exon
so has part: feature:1296328-1296417:1:exon
so has part: feature:1296744-1296798:1:exon
so has part: feature:1297861-1297920:1:exon
so has part: feature:1298006-1298083:1:exon
so has part: feature:1299506-1299614:1:exon
so has part: feature:1300748-1300924:1:exon
so has part: feature:1302041-1302108:1:exon
so has part: feature:1303082-1303189:1:exon

position:1278552:1
position: 1278552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1278552-1278563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1280355-1280450:1:exon

position:1280355:1
position: 1280355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283223-1283298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283926-1284003:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1284389-1284482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290960-1291034:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1292601-1292684:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1293254-1293310:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1293867-1293915:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1294472-1294544:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1295813-1295985:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1296328-1296417:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296744-1296798:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1297861-1297920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1298006-1298083:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1299506-1299614:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1300748-1300924:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1302041-1302108:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1303082-1303189:1:exon

Pole2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Pole2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase epsilon subunit 2 isoform X2
translation: MIERSVVEAAVQECSQSVDETIEHIFNIIGAFDIPHFIYNSERKKFLPLSMTNHAAPTLFGTAKDKAELYRERYTILHQRTHRHELFTPPVIGSQPEESGSKFQLKTIETLLGSTSRVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEGWFEDQVFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTSAKLRQLEDENKDAMFVIVSDVWLDQVQVLEKLHIMFSGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKSLADIICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQYCTQEIIIFREDLVNKMCRNCVRFPSSSLDIPTHFVKTILSQGHLAPLPLYVCPVYWAYDYTLRVYPVPDLLVIADKYDPFTVTNTECLCINPGSFPRSGFAFKVFYPSGKTVEDSKLQGF
SIO_010081: Pole2
subclass of: SO_0000673
so part of: Pole2
location: join(1283234..1283298,1283926..1284003,1284389..1284482,1290960..1291034,1292601..1292684,1293254..1293310,1293867..1293915,1294472..1294544,1295813..1295985,1296328..1296417,1296744..1296798,1297861..1297920,1298006..1298083,1299506..1299614,1300748..1300924,1302041..1302108,1303082..1303100)
location: region:1283234-1303100:1
so has part: feature:1283234-1283298:1:exon
so has part: feature:1283926-1284003:1:exon
so has part: feature:1284389-1284482:1:exon
so has part: feature:1290960-1291034:1:exon
so has part: feature:1292601-1292684:1:exon
so has part: feature:1293254-1293310:1:exon
so has part: feature:1293867-1293915:1:exon
so has part: feature:1294472-1294544:1:exon
so has part: feature:1295813-1295985:1:exon
so has part: feature:1296328-1296417:1:exon
so has part: feature:1296744-1296798:1:exon
so has part: feature:1297861-1297920:1:exon
so has part: feature:1298006-1298083:1:exon
so has part: feature:1299506-1299614:1:exon
so has part: feature:1300748-1300924:1:exon
so has part: feature:1302041-1302108:1:exon
so has part: feature:1303082-1303100:1:exon

XP_034369975.1
type: Protein
SIO_000068: ncbiprotein

position:1283234:1
position: 1283234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1283234-1283298:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283926-1284003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1284389-1284482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1290960-1291034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292601-1292684:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1293254-1293310:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1293867-1293915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294472-1294544:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295813-1295985:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1296328-1296417:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1296744-1296798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1297861-1297920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1298006-1298083:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1299506-1299614:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1300748-1300924:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1302041-1302108:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1303082-1303100:1:exon

Dnaaf2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Dnaaf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1307998..1316254
location: region:1307998-1316254:1
so has part: feature:1307998-1316254:1:exon
subclass of: SO_0000010

117716806
type: Gene
SIO_000068: ncbigene

position:1307998:1
position: 1307998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316254:1
position: 1316254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1307998-1316254:1:exon

Dnaaf2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dnaaf2
product: dynein axonemal assembly factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 long SRA reads, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513868.1
SIO_010081: Dnaaf2
subclass of: SO_0000673
so part of: Dnaaf2
location: join(1307998..1311035,1313127..1313270,1315696..1316254)
location: region:1307998-1316254:1
so has part: feature:1307998-1311035:1:exon
so has part: feature:1313127-1313270:1:exon
so has part: feature:1315696-1316254:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1307998-1311035:1:exon

position:1311035:1
position: 1311035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1313127-1313270:1:exon

position:1313127:1
position: 1313127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1313270:1
position: 1313270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1315696-1316254:1:exon

position:1315696:1
position: 1315696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Dnaaf2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dnaaf2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kintoun
translation: MAKGAASSALEDMDLSGEEVQRLTSAFQDPEFRRMFSEYAAEITDPENRRRYEEEITALERERGVEVRFVHPEPGHVLRTSLDGEHRCFVNVCSNSLVGSPSSRPGPGRGGTAAGSHWSLPYSLAPGRPYAGRNGARYTVYDVVFHPEALALAQSHERFREMLDATALEAVEQQFGVKLDRRNAKTLKIKYKGTPEAAVLRTPLPGGVPAQPEEEPPGFLPDPPYPYRYPPAAESTARSPASPAPEAVQRPEPTEPRCSVVQRHHVDLQDYRCSRDAAPSTVPHELVVTIELPLLRSAERAELEVKGKLLCLDSRNPDYRLRLSLPYPVDDGRGKAQYNKARRQLVVTLPVALAAARQDLPATPEELTDETGTDDIACTSAGEFASARVEAADRTGAEHGEESCVATPDPGAADAEGELVPEPEQDFGGDSVAPLVLGERTPPGARSFPYSALPGGGDAESPVERLGVRGDLSVQTSEQQEGTRHVTSCSPMGGPGTESLEPLCPPLQCNQDEDSLTLLIQVPGIQPQSLHGDLRPLSYELCFSTQDSGYSFTLQFAPENKLSTKEPEISISLNNAVIVLAKSPESHGHWREWYCGLNDDSLEERLFINEENVNEFLEEVLCSPLKQARTLAPPLIEVLQVTDDQIQIHAKSQECSDPDGLQGKEKGVKEGCPLSEKENTEQSTTCRADSDSSVAVEATKINTCVSALGLQHSCPDVPHVLSGKPLQPEAKMDPEFIRESSTTCLSEEKENIKEPVITKEKNIDGDHLSSLLNKTVIQNIPDFDTIKETNTQDGSVQVIRDHTTHCAFSFQNSMLYDLD
SIO_010081: Dnaaf2
subclass of: SO_0000673
so part of: Dnaaf2
location: join(1309227..1311035,1313127..1313270,1315696..1316202)
location: region:1309227-1316202:1
so has part: feature:1309227-1311035:1:exon
so has part: feature:1313127-1313270:1:exon
so has part: feature:1315696-1316202:1:exon

XP_034369759.1
type: Protein
SIO_000068: ncbiprotein

position:1309227:1
position: 1309227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316202:1
position: 1316202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1309227-1311035:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1313127-1313270:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315696-1316202:1:exon

Mgat2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mgat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1319724..1321813)
location: region:1319724-1321813:-1
so has part: feature:1319724-1321813:-1:exon
subclass of: SO_0000010

117716807
type: Gene
SIO_000068: ncbigene

position:1319724:-1
position: 1319724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321813:-1
position: 1321813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1319724-1321813:-1:exon

Mgat2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mgat2
product: alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 5 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513869.1
SIO_010081: Mgat2
subclass of: SO_0000673
so part of: Mgat2
location: complement(1319724..1321813)
location: region:1319724-1321813:-1
so has part: feature:1319724-1321813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1319724-1321813:-1:exon

Mgat2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mgat2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
translation: MRFRIYKRKVLILTLVVAACGFVLWSSNGRQRKNDALAPPLLNAEPLRGAGHLAASVGIRRVSNESAAPLVPAVPRPEVDNLTLRYRSLVYQLNFDQMLRNVDNDGTWSPGELVLVVQVHNRPEYLRLLIDSLRKAQGIHEILVIFSHDFWSAEINNLISRVDFCPVLQVFFPFSIQLYPSEFPGSDPRDCPRDLKKNAALKLGCINAEYPDSFGHYREAKFSQTKHHWWWKLHFVWERVKVLQDYTGLILFLEEDHYLAPDFYHVFKKMWKLKQQECPGCDVLSLGTYTTILSFYGIADKVDVKTWKSTEHNMGLALTREAYQKLIECTDTFCTYDDYNWDWTLQYLTLACLPKVWKVLVPQAPRIFHAGDCGMHHKKTCRPSTQSAQIESLLNNNKQYMFPETLVIGEKFPMAAFSPPRKNGGWGDIRDHELCKSYRRLQ
SIO_010081: Mgat2
subclass of: SO_0000673
so part of: Mgat2
location: complement(1319988..1321316)
location: region:1319988-1321316:-1
so has part: feature:1319988-1321316:-1:exon

XP_034369760.1
type: Protein
SIO_000068: ncbiprotein

position:1319988:-1
position: 1319988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321316:-1
position: 1321316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1319988-1321316:-1:exon

Rpl36al
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Rpl36al
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1321894..1323272
location: region:1321894-1323272:1
so has part: feature:1321894-1323272:1:exon
subclass of: SO_0000010

117716808
type: Gene
SIO_000068: ncbigene

position:1321894:1
position: 1321894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323272:1
position: 1323272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321894-1323272:1:exon

Rpl36al
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rpl36al
product: ribosomal protein L36a like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513870.1
SIO_010081: Rpl36al
subclass of: SO_0000673
so part of: Rpl36al
location: join(1321894..1321982,1322841..1323272)
location: region:1321894-1323272:1
so has part: feature:1321894-1321982:1:exon
so has part: feature:1322841-1323272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321894-1321982:1:exon

position:1321982:1
position: 1321982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1322841-1323272:1:exon

position:1322841:1
position: 1322841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rpl36al
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rpl36al
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L36a-like
translation: MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVDPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF
SIO_010081: Rpl36al
subclass of: SO_0000673
so part of: Rpl36al
location: 1322870..1323190
location: region:1322870-1323190:1
so has part: feature:1322870-1323190:1:exon

XP_034369761.1
type: Protein
SIO_000068: ncbiprotein

position:1322870:1
position: 1322870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323190:1
position: 1323190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1322870-1323190:1:exon

Lrr1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Lrr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1324681..1333079)
location: region:1324681-1333079:-1
so has part: feature:1324681-1333079:-1:exon
subclass of: SO_0000010

117717160
type: Gene
SIO_000068: ncbigene

position:1324681:-1
position: 1324681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333079:-1
position: 1333079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1324681-1333079:-1:exon

Lrr1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lrr1
product: leucine rich repeat protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514434.1
SIO_010081: Lrr1
subclass of: SO_0000673
so part of: Lrr1
location: complement(join(1324681..1325113,1327224..1327945,1329897..1329995,1332835..1333079))
location: region:1324681-1333079:-1
so has part: feature:1332835-1333079:-1:exon
so has part: feature:1329897-1329995:-1:exon
so has part: feature:1327224-1327945:-1:exon
so has part: feature:1324681-1325113:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1332835-1333079:-1:exon

position:1332835:-1
position: 1332835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1329897-1329995:-1:exon

position:1329897:-1
position: 1329897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329995:-1
position: 1329995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327224-1327945:-1:exon

position:1327224:-1
position: 1327224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327945:-1
position: 1327945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1324681-1325113:-1:exon

position:1325113:-1
position: 1325113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lrr1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lrr1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat protein 1
translation: MRLPCEVEVRSCHLPALGLKSRGKGVRAVVSLCQSPSGNELEPGARTEPGGRACLLVSTLKDKQGTRYQLRKNIEQLFTKFVDEGKATVRLKDPPVDICLNKANPGNLKSFLSAMRLAHRGCDVNTPLSTLKPVKASEFEKYKTKMVITSKNDYPLSKNFPYFLEQLQASYCRLTQVDIRMLYLKYLTKLDLSHNCIKALPATIGDLAHLQELNLNDNRLERFSVPLCKSTLQKSLQSLDLSKNKIKALPVQFCQFRGLTNLNLSDNELIHLPFKIGQLTNLRYLSAARNKLRNLPCEFKMLSLEYLDLFGNTFEKPEVLPIIKLQVPLTLVESCERAVLSYRIPYGPDIIPYHLCQDLDTAKTCVCGRFCLQSFIQGTTMMNLHSVANTVVLVDDMGRAEAPVISYFCSLTCFVNSSAMLN
SIO_010081: Lrr1
subclass of: SO_0000673
so part of: Lrr1
location: complement(join(1324873..1325113,1327224..1327945,1329897..1329995,1332835..1333041))
location: region:1324873-1333041:-1
so has part: feature:1332835-1333041:-1:exon
so has part: feature:1329897-1329995:-1:exon
so has part: feature:1327224-1327945:-1:exon
so has part: feature:1324873-1325113:-1:exon

XP_034370325.1
type: Protein
SIO_000068: ncbiprotein

position:1324873:-1
position: 1324873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333041:-1
position: 1333041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1332835-1333041:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1329897-1329995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1327224-1327945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1324873-1325113:-1:exon

Rps29
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Rps29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1342673..1344185
location: region:1342673-1344185:1
so has part: feature:1342673-1344185:1:exon
subclass of: SO_0000010

117717041
type: Gene
SIO_000068: ncbigene

position:1342673:1
position: 1342673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344185:1
position: 1344185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342673-1344185:1:exon

Rps29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rps29
product: ribosomal protein S29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514249.1
SIO_010081: Rps29
subclass of: SO_0000673
so part of: Rps29
location: join(1342673..1342861,1343079..1343178,1344086..1344185)
location: region:1342673-1344185:1
so has part: feature:1342673-1342861:1:exon
so has part: feature:1343079-1343178:1:exon
so has part: feature:1344086-1344185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1342673-1342861:1:exon

position:1342861:1
position: 1342861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1343079-1343178:1:exon

position:1343079:1
position: 1343079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343178:1
position: 1343178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1344086-1344185:1:exon

position:1344086:1
position: 1344086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rps29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rps29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S29
translation: MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD
SIO_010081: Rps29
subclass of: SO_0000673
so part of: Rps29
location: join(1342800..1342861,1343079..1343178,1344086..1344094)
location: region:1342800-1344094:1
so has part: feature:1342800-1342861:1:exon
so has part: feature:1343079-1343178:1:exon
so has part: feature:1344086-1344094:1:exon

XP_034370140.1
type: Protein
SIO_000068: ncbiprotein

position:1342800:1
position: 1342800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344094:1
position: 1344094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342800-1342861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1343079-1343178:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1344086-1344094:1:exon

LOC117717321
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717321
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1358143..1360518
location: region:1358143-1360518:1
so has part: feature:1358143-1360518:1:exon

117717321
type: Gene
SIO_000068: ncbigene

position:1358143:1
position: 1358143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360518:1
position: 1360518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1358143-1360518:1:exon

LOC117717321
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717321
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717321
subclass of: SO_0000673
so part of: LOC117717321
location: 1358143..1358293
location: region:1358143-1358293:1
so has part: feature:1358143-1358293:1:exon

position:1358293:1
position: 1358293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1358143-1358293:1:exon

LOC117717321
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717321
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717321
subclass of: SO_0000673
so part of: LOC117717321
location: 1359889..1360518
location: region:1359889-1360518:1
so has part: feature:1359889-1360518:1:exon

position:1359889:1
position: 1359889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359889-1360518:1:exon

LOC117717322
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1560460..1561028)
location: region:1560460-1561028:-1
so has part: feature:1560460-1561028:-1:exon

117717322
type: Gene
SIO_000068: ncbigene

position:1560460:-1
position: 1560460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561028:-1
position: 1561028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1560460-1561028:-1:exon

LOC117717322
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717322
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717322
subclass of: SO_0000673
so part of: LOC117717322
location: complement(1560460..1561028)
location: region:1560460-1561028:-1
so has part: feature:1560460-1561028:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1560460-1561028:-1:exon

LOC117717225
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1565516..1565986
location: region:1565516-1565986:1
so has part: feature:1565516-1565986:1:exon
subclass of: SO_0000010

117717225
type: Gene
SIO_000068: ncbigene

position:1565516:1
position: 1565516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565986:1
position: 1565986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565516-1565986:1:exon

LOC117717225
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117717225
product: 60S ribosomal protein L29-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514531.1
SIO_010081: LOC117717225
subclass of: SO_0000673
so part of: LOC117717225
location: 1565516..1565986
location: region:1565516-1565986:1
so has part: feature:1565516-1565986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1565516-1565986:1:exon

LOC117717225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117717225
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L29-like
translation: MAKSKNHTTYNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHRKKGLEKMQANSAKAVSARAEAIKALVKPQAIKPKMPKGPSCKLSHLAFIAHPKLGKRIRSCMAKGHRLCQPKPKVQTKAEAKAPAKAQAKAPAQAPKGAQAPVKAP
SIO_010081: LOC117717225
subclass of: SO_0000673
so part of: LOC117717225
location: 1565516..1565986
location: region:1565516-1565986:1
so has part: feature:1565516-1565986:1:exon

XP_034370422.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1565516-1565986:1:exon

LOC117717323
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717323
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1879027..1934563
location: region:1879027-1934563:1
so has part: feature:1879027-1934563:1:exon

117717323
type: Gene
SIO_000068: ncbigene

position:1879027:1
position: 1879027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1934563:1
position: 1934563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1879027-1934563:1:exon

LOC117717323
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717323
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117717323
subclass of: SO_0000673
so part of: LOC117717323
location: 1879027..1879129
location: region:1879027-1879129:1
so has part: feature:1879027-1879129:1:exon

position:1879129:1
position: 1879129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1879027-1879129:1:exon

LOC117717323
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717323
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117717323
subclass of: SO_0000673
so part of: LOC117717323
location: 1900339..1900448
location: region:1900339-1900448:1
so has part: feature:1900339-1900448:1:exon

position:1900339:1
position: 1900339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900448:1
position: 1900448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900339-1900448:1:exon

LOC117717323
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717323
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117717323
subclass of: SO_0000673
so part of: LOC117717323
location: 1932718..1934563
location: region:1932718-1934563:1
so has part: feature:1932718-1934563:1:exon

position:1932718:1
position: 1932718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1932718-1934563:1:exon

LOC117717324
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717324
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2464185..2482242
location: region:2464185-2482242:1
so has part: feature:2464185-2482242:1:exon

117717324
type: Gene
SIO_000068: ncbigene

position:2464185:1
position: 2464185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2482242:1
position: 2482242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2464185-2482242:1:exon

LOC117717324
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717324
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717324
subclass of: SO_0000673
so part of: LOC117717324
location: 2464185..2464244
location: region:2464185-2464244:1
so has part: feature:2464185-2464244:1:exon

position:2464244:1
position: 2464244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2464185-2464244:1:exon

LOC117717324
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717324
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717324
subclass of: SO_0000673
so part of: LOC117717324
location: 2477313..2477441
location: region:2477313-2477441:1
so has part: feature:2477313-2477441:1:exon

position:2477313:1
position: 2477313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2477441:1
position: 2477441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2477313-2477441:1:exon

LOC117717324
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717324
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717324
subclass of: SO_0000673
so part of: LOC117717324
location: 2481574..2481759
location: region:2481574-2481759:1
so has part: feature:2481574-2481759:1:exon

position:2481574:1
position: 2481574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2481759:1
position: 2481759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2481574-2481759:1:exon

LOC117717324
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717324
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717324
subclass of: SO_0000673
so part of: LOC117717324
location: 2481855..2482242
location: region:2481855-2482242:1
so has part: feature:2481855-2482242:1:exon

position:2481855:1
position: 2481855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2481855-2482242:1:exon

LOC117716987
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2967786..2969167
location: region:2967786-2969167:1
so has part: feature:2967786-2969167:1:exon
subclass of: SO_0000010

117716987
type: Gene
SIO_000068: ncbigene

position:2967786:1
position: 2967786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2969167:1
position: 2969167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967786-2969167:1:exon

LOC117716987
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716987
product: protein NipSnap homolog 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514167.1
SIO_010081: LOC117716987
subclass of: SO_0000673
so part of: LOC117716987
location: join(2967786..2968061,2968161..2969167)
location: region:2967786-2969167:1
so has part: feature:2967786-2968061:1:exon
so has part: feature:2968161-2969167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2967786-2968061:1:exon

position:2968061:1
position: 2968061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2968161-2969167:1:exon

position:2968161:1
position: 2968161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716987
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716987
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NipSnap homolog 1-like
translation: MAPRLCIISAAARRLLLKPGPRAGDLAVAGAVRFYSKDSEGSWFRSLLVHKVDPRKDAHSTLLSKKETSNLYKIQFHNVKPECLDTYNSLTEAVLPKLHLDEDYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKTNKEYLEFRKEWSKMLLSRRNQLLLEFSFWNEPQPRAGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENQEAVGGFFSQIGELYVIHHLWAYKDLQSREETRSAAWRKRGWDENVYYTVPLVRHMESRIMIPLKISPLQ
SIO_010081: LOC117716987
subclass of: SO_0000673
so part of: LOC117716987
location: join(2967786..2968061,2968161..2968739)
location: region:2967786-2968739:1
so has part: feature:2967786-2968061:1:exon
so has part: feature:2968161-2968739:1:exon

XP_034370058.1
type: Protein
SIO_000068: ncbiprotein

position:2968739:1
position: 2968739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2967786-2968061:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2968161-2968739:1:exon

Mdga2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mdga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3024147..3753747
location: region:3024147-3753747:1
so has part: feature:3024147-3753747:1:exon
subclass of: SO_0000010

117717098
type: Gene
SIO_000068: ncbigene

position:3024147:1
position: 3024147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3753747:1
position: 3753747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024147-3753747:1:exon

Mdga2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mdga2
product: MAM domain containing glycosylphosphatidylinositol anchor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034514333.1
SIO_010081: Mdga2
subclass of: SO_0000673
so part of: Mdga2
location: join(3024147..3024417,3362674..3362813,3429067..3429241,3492645..3492841,3501745..3501877,3526801..3527070,3567981..3568310,3593908..3594201,3655724..3655993,3672370..3672518,3713737..3713914,3716959..3716979,3721371..3721526,3721966..3722124,3739046..3739176,3751234..3751339,3753364..3753747)
location: region:3024147-3753747:1
so has part: feature:3024147-3024417:1:exon
so has part: feature:3362674-3362813:1:exon
so has part: feature:3429067-3429241:1:exon
so has part: feature:3492645-3492841:1:exon
so has part: feature:3501745-3501877:1:exon
so has part: feature:3526801-3527070:1:exon
so has part: feature:3567981-3568310:1:exon
so has part: feature:3593908-3594201:1:exon
so has part: feature:3655724-3655993:1:exon
so has part: feature:3672370-3672518:1:exon
so has part: feature:3713737-3713914:1:exon
so has part: feature:3716959-3716979:1:exon
so has part: feature:3721371-3721526:1:exon
so has part: feature:3721966-3722124:1:exon
so has part: feature:3739046-3739176:1:exon
so has part: feature:3751234-3751339:1:exon
so has part: feature:3753364-3753747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3024147-3024417:1:exon

position:3024417:1
position: 3024417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3362674-3362813:1:exon

position:3362674:1
position: 3362674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3362813:1
position: 3362813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3429067-3429241:1:exon

position:3429067:1
position: 3429067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3429241:1
position: 3429241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3492645-3492841:1:exon

position:3492645:1
position: 3492645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3492841:1
position: 3492841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3501745-3501877:1:exon

position:3501745:1
position: 3501745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3501877:1
position: 3501877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3526801-3527070:1:exon

position:3526801:1
position: 3526801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3527070:1
position: 3527070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3567981-3568310:1:exon

position:3567981:1
position: 3567981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3568310:1
position: 3568310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3593908-3594201:1:exon

position:3593908:1
position: 3593908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3594201:1
position: 3594201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3655724-3655993:1:exon

position:3655724:1
position: 3655724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3655993:1
position: 3655993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3672370-3672518:1:exon

position:3672370:1
position: 3672370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3672518:1
position: 3672518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3713737-3713914:1:exon

position:3713737:1
position: 3713737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3713914:1
position: 3713914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3716959-3716979:1:exon

position:3716959:1
position: 3716959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3716979:1
position: 3716979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3721371-3721526:1:exon

position:3721371:1
position: 3721371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3721526:1
position: 3721526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3721966-3722124:1:exon

position:3721966:1
position: 3721966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3722124:1
position: 3722124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3739046-3739176:1:exon

position:3739046:1
position: 3739046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3739176:1
position: 3739176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3751234-3751339:1:exon

position:3751234:1
position: 3751234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3751339:1
position: 3751339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3753364-3753747:1:exon

position:3753364:1
position: 3753364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mdga2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mdga2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAM domain-containing glycosylphosphatidylinositol anchor protein 2
translation: MDLVYGLVWLLTVLLEGISGQGVYAPPTVRIVHSGLACNIEEERYSERVYTIREGETLELTCLVTGHPRPQIRWTKTAGSASDRFQDSSVFNETLRITNIQRHQGGRYYCKAENGLGSPAIKSIRVDVYYLDDPVVTVHQSIGEAKEQFYYERTVFLRCVANSNPPVRYSWRRGQEVLLQGSDKGVEIYEPFFTQGETKILKLKNLRPQDYANYSCIASVRNVCNIPDKMVSFRLSNKTASPSIKLLVDDPIVVNPGEAITLVCVTTGGEPTPSLTWVRSFGTLPEKIVLNGGTLTIPAITSDDAGTYSCIANNNVGNPAKKSTNIIVRALKKGRFWITPDPYHKDDNIQIGREVKISCQVEAVPSEELTFSWFKNGRPLRSSERMVITQTDPDVSPGTTNLDIIDLKFTDFGTYTCVASLKGGGISDISIDVNISSSTVPPNLTVPQEKSPLVTREGDTIELQCQVTGKPKPIILWSRADKEVAMPDGTMQMESYDGTLRIVNVSREMSGMYRCQTSQYNGFNVKPREALVQLIVQYPPAVEPAFLEIRQGQDRSVTMSCRVLRAYPIRVLTYEWRLGNKLLRTGQFDSQEYTEYPLKSLSNENYGVYNCSIINEAGAGRCSFLVTGKAYAPEFYYDTYNPVWQNRHRVYSYSLQWTQMNPDAVDRIVAYRLGIRQAGQQRWWEQEIKINGNIQKGELITYNLTELIKPEAYEVRLTPLTKFGEGDSTIRVIKYTAPVNPHLREFHCGFEDGNICLFTQDDTDNFDWTKQSTATRNTKYTPNTGPNADRSGSKEGFYMYIETSRPRLEGEKARLLSPVFSIAPKNPYGPTNSAYCFSFFYHMYGQHIGVLNVYLRLKGQTTIENPLWSSSGNKGQRWNEAHVNIYPITSFQLIFEGIRGPGIEGDIAIDDVSIAEGECAKQDLPTKNSVDGAVGILVHIWLFPVIILISILSPRR
SIO_010081: Mdga2
subclass of: SO_0000673
so part of: Mdga2
location: join(3024345..3024417,3362674..3362813,3429067..3429241,3492645..3492841,3501745..3501877,3526801..3527070,3567981..3568310,3593908..3594201,3655724..3655993,3672370..3672518,3713737..3713914,3716959..3716979,3721371..3721526,3721966..3722124,3739046..3739176,3751234..3751339,3753364..3753452)
location: region:3024345-3753452:1
so has part: feature:3024345-3024417:1:exon
so has part: feature:3362674-3362813:1:exon
so has part: feature:3429067-3429241:1:exon
so has part: feature:3492645-3492841:1:exon
so has part: feature:3501745-3501877:1:exon
so has part: feature:3526801-3527070:1:exon
so has part: feature:3567981-3568310:1:exon
so has part: feature:3593908-3594201:1:exon
so has part: feature:3655724-3655993:1:exon
so has part: feature:3672370-3672518:1:exon
so has part: feature:3713737-3713914:1:exon
so has part: feature:3716959-3716979:1:exon
so has part: feature:3721371-3721526:1:exon
so has part: feature:3721966-3722124:1:exon
so has part: feature:3739046-3739176:1:exon
so has part: feature:3751234-3751339:1:exon
so has part: feature:3753364-3753452:1:exon

XP_034370224.1
type: Protein
SIO_000068: ncbiprotein

position:3024345:1
position: 3024345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3753452:1
position: 3753452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024345-3024417:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3362674-3362813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3429067-3429241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3492645-3492841:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3501745-3501877:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3526801-3527070:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3567981-3568310:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3593908-3594201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3655724-3655993:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3672370-3672518:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3713737-3713914:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3716959-3716979:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3721371-3721526:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3721966-3722124:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3739046-3739176:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3751234-3751339:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3753364-3753452:1:exon

LOC117717404
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717404
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3662756..3662887
location: region:3662756-3662887:1
so has part: feature:3662756-3662887:1:exon
subclass of: SO_0000578

117717404
type: Gene
SIO_000068: ncbigene

position:3662756:1
position: 3662756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3662887:1
position: 3662887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3662756-3662887:1:exon

LOC117717404
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117717404
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607898.1
SIO_010081: LOC117717404
subclass of: SO_0000673
so part of: LOC117717404
location: 3662756..3662887
location: region:3662756-3662887:1
so has part: feature:3662756-3662887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3662756-3662887:1:exon

LOC117717099
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717099
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3741676..3743324)
location: region:3741676-3743324:-1
so has part: feature:3741676-3743324:-1:exon

117717099
type: Gene
SIO_000068: ncbigene

position:3741676:-1
position: 3741676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3743324:-1
position: 3743324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3741676-3743324:-1:exon

LOC117717099
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717099
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC117717099
subclass of: SO_0000673
so part of: LOC117717099
location: complement(3741676..3742090)
location: region:3741676-3742090:-1
so has part: feature:3741676-3742090:-1:exon

position:3742090:-1
position: 3742090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3741676-3742090:-1:exon

LOC117717099
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717099
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC117717099
subclass of: SO_0000673
so part of: LOC117717099
location: complement(3742496..3743324)
location: region:3742496-3743324:-1
so has part: feature:3742496-3743324:-1:exon

position:3742496:-1
position: 3742496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3742496-3743324:-1:exon

LOC117717326
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717326
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3886938..3888603
location: region:3886938-3888603:1
so has part: feature:3886938-3888603:1:exon

117717326
type: Gene
SIO_000068: ncbigene

position:3886938:1
position: 3886938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3888603:1
position: 3888603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3886938-3888603:1:exon

LOC117717326
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717326
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117717326
subclass of: SO_0000673
so part of: LOC117717326
location: 3886938..3887150
location: region:3886938-3887150:1
so has part: feature:3886938-3887150:1:exon

position:3887150:1
position: 3887150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3886938-3887150:1:exon

LOC117717326
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717326
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117717326
subclass of: SO_0000673
so part of: LOC117717326
location: 3887263..3888603
location: region:3887263-3888603:1
so has part: feature:3887263-3888603:1:exon

position:3887263:1
position: 3887263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3887263-3888603:1:exon

Rpl10l
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Rpl10l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3940889..3941904
location: region:3940889-3941904:1
so has part: feature:3940889-3941904:1:exon
subclass of: SO_0000010

117717193
type: Gene
SIO_000068: ncbigene

position:3940889:1
position: 3940889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3941904:1
position: 3941904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3940889-3941904:1:exon

Rpl10l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rpl10l
product: ribosomal protein L10 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 18 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514488.1
SIO_010081: Rpl10l
subclass of: SO_0000673
so part of: Rpl10l
location: 3940889..3941904
location: region:3940889-3941904:1
so has part: feature:3940889-3941904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3940889-3941904:1:exon

Rpl10l
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Rpl10l
product: ribosomal protein L10 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514489.1
SIO_010081: Rpl10l
subclass of: SO_0000673
so part of: Rpl10l
location: join(3940927..3941035,3941117..3941571)
location: region:3940927-3941571:1
so has part: feature:3940927-3941035:1:exon
so has part: feature:3941117-3941571:1:exon

position:3940927:1
position: 3940927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3941571:1
position: 3941571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3940927-3941035:1:exon

position:3941035:1
position: 3941035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3941117-3941571:1:exon

position:3941117:1
position: 3941117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Rpl10l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rpl10l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L10-like isoform X1
translation: MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAAKRLIPDGCGVKYIPERGPLDKWRALHS
SIO_010081: Rpl10l
subclass of: SO_0000673
so part of: Rpl10l
location: 3940927..3941571
location: region:3940927-3941571:1
so has part: feature:3940927-3941571:1:exon

XP_034370379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3940927-3941571:1:exon

Rpl10l
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Rpl10l
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L10-like isoform X2
translation: MGRRPARCYRYCKNKPYPKSRFCRGVPDAKIRIFDLALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAAKRLIPDGCGVKYIPERGPLDKWRALHS
SIO_010081: Rpl10l
subclass of: SO_0000673
so part of: Rpl10l
location: join(3940927..3941035,3941117..3941571)
location: region:3940927-3941571:1
so has part: feature:3940927-3941035:1:exon
so has part: feature:3941117-3941571:1:exon

XP_034370380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3940927-3941035:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3941117-3941571:1:exon

LOC117716994
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4534008..4534984
location: region:4534008-4534984:1
so has part: feature:4534008-4534984:1:exon
subclass of: SO_0000010

117716994
type: Gene
SIO_000068: ncbigene

position:4534008:1
position: 4534008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4534984:1
position: 4534984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4534008-4534984:1:exon

LOC117716994
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716994
product: 40S ribosomal protein SA-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514174.1
SIO_010081: LOC117716994
subclass of: SO_0000673
so part of: LOC117716994
location: 4534008..4534984
location: region:4534008-4534984:1
so has part: feature:4534008-4534984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4534008-4534984:1:exon

LOC117716994
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein SA-like
translation: MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIVNLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPVAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLVRQVLRMRGTISREHPWEVMPDFYFYRDPEEIEKEEQDAAEKAVTKEEFQGEWTAPAPEFTAAQLEVAGWSEGVQVPSVPIQQFPTEDWSAQTATEDWSAAPTAQATEWVGATTEWS
SIO_010081: LOC117716994
subclass of: SO_0000673
so part of: LOC117716994
location: 4534055..4534942
location: region:4534055-4534942:1
so has part: feature:4534055-4534942:1:exon

XP_034370065.1
type: Protein
SIO_000068: ncbiprotein

position:4534055:1
position: 4534055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4534942:1
position: 4534942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4534055-4534942:1:exon

LOC117717399
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717399
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4563147..4563278
location: region:4563147-4563278:1
so has part: feature:4563147-4563278:1:exon
subclass of: SO_0000578

117717399
type: Gene
SIO_000068: ncbigene

position:4563147:1
position: 4563147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4563278:1
position: 4563278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4563147-4563278:1:exon

LOC117717399
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117717399
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607894.1
SIO_010081: LOC117717399
subclass of: SO_0000673
so part of: LOC117717399
location: 4563147..4563278
location: region:4563147-4563278:1
so has part: feature:4563147-4563278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4563147-4563278:1:exon

LOC117717456
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717456
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4598478..4598582)
location: region:4598478-4598582:-1
so has part: feature:4598478-4598582:-1:exon
subclass of: SO_0000623

117717456
type: Gene
SIO_000068: ncbigene

position:4598478:-1
position: 4598478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4598582:-1
position: 4598582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4598478-4598582:-1:exon

LOC117717456
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117717456
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607936.1
SIO_010081: LOC117717456
subclass of: SO_0000673
so part of: LOC117717456
location: complement(4598478..4598582)
location: region:4598478-4598582:-1
so has part: feature:4598478-4598582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4598478-4598582:-1:exon

LOC117717408
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717408
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4710445..4710576
location: region:4710445-4710576:1
so has part: feature:4710445-4710576:1:exon
subclass of: SO_0000578

117717408
type: Gene
SIO_000068: ncbigene

position:4710445:1
position: 4710445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4710576:1
position: 4710576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4710445-4710576:1:exon

LOC117717408
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117717408
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607901.1
SIO_010081: LOC117717408
subclass of: SO_0000673
so part of: LOC117717408
location: 4710445..4710576
location: region:4710445-4710576:1
so has part: feature:4710445-4710576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4710445-4710576:1:exon

LOC117717390
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717390
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(4797339..4797463)
location: region:4797339-4797463:-1
so has part: feature:4797339-4797463:-1:exon

117717390
type: Gene
SIO_000068: ncbigene

position:4797339:-1
position: 4797339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4797463:-1
position: 4797463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4797339-4797463:-1:exon

LOC117717390
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717390
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00554
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117717390
subclass of: SO_0000673
so part of: LOC117717390
location: complement(4797339..4797463)
location: region:4797339-4797463:-1
so has part: feature:4797339-4797463:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4797339-4797463:-1:exon

Mis18bp1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mis18bp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4930208..4967526
location: region:4930208-4967526:1
so has part: feature:4930208-4967526:1:exon
subclass of: SO_0000010

117717144
type: Gene
SIO_000068: ncbigene

position:4930208:1
position: 4930208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4967526:1
position: 4967526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4930208-4967526:1:exon

Mis18bp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mis18bp1
product: MIS18 binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514395.1
SIO_010081: Mis18bp1
subclass of: SO_0000673
so part of: Mis18bp1
location: join(4930208..4930721,4933373..4933827,4937502..4937575,4939175..4939305,4940061..4940148,4941362..4941510,4951493..4952294,4956731..4956903,4959255..4959415,4961392..4961540,4963429..4963528,4967205..4967259,4967432..4967526)
location: region:4930208-4967526:1
so has part: feature:4930208-4930721:1:exon
so has part: feature:4933373-4933827:1:exon
so has part: feature:4937502-4937575:1:exon
so has part: feature:4939175-4939305:1:exon
so has part: feature:4940061-4940148:1:exon
so has part: feature:4941362-4941510:1:exon
so has part: feature:4951493-4952294:1:exon
so has part: feature:4956731-4956903:1:exon
so has part: feature:4959255-4959415:1:exon
so has part: feature:4961392-4961540:1:exon
so has part: feature:4963429-4963528:1:exon
so has part: feature:4967205-4967259:1:exon
so has part: feature:4967432-4967526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4930208-4930721:1:exon

position:4930721:1
position: 4930721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4933373-4933827:1:exon

position:4933373:1
position: 4933373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4933827:1
position: 4933827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4937502-4937575:1:exon

position:4937502:1
position: 4937502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4937575:1
position: 4937575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4939175-4939305:1:exon

position:4939175:1
position: 4939175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4939305:1
position: 4939305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4940061-4940148:1:exon

position:4940061:1
position: 4940061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4940148:1
position: 4940148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4941362-4941510:1:exon

position:4941362:1
position: 4941362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4941510:1
position: 4941510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4951493-4952294:1:exon

position:4951493:1
position: 4951493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4952294:1
position: 4952294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4956731-4956903:1:exon

position:4956731:1
position: 4956731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4956903:1
position: 4956903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4959255-4959415:1:exon

position:4959255:1
position: 4959255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4959415:1
position: 4959415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4961392-4961540:1:exon

position:4961392:1
position: 4961392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4961540:1
position: 4961540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4963429-4963528:1:exon

position:4963429:1
position: 4963429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4963528:1
position: 4963528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4967205-4967259:1:exon

position:4967205:1
position: 4967205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4967259:1
position: 4967259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4967432-4967526:1:exon

position:4967432:1
position: 4967432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mis18bp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mis18bp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mis18-binding protein 1
translation: MFVTPLKHSGIHLSSGTLQKGNMPVAAVFIDSIPSGTLTPMKDLMKYQKSSLKLNGHKKNQLLEITTSNNKNVFQSTMLSEDALSNCSPDVSVIKPNMDMIYESPGKMFQRMKEKVQFDKQEQPSRSMLGSPKCEHNKVFPPNRGKKTQLQHTYICEEKEKSFQSNNSSLGGPPILNQEQKNVSASCISRKALTRAQFGRQILHSKGRPLETTVFKKNTYALEGIDSTYEKFENTDIRSICVPIKNHSQSTTSDNDVTTERTKEDITEENGEMMSRKTILQDPMKNISKVKRVSPRLNLIVSDRSQRKLTKLETVVSEVKQYQVVHLQEWMIKVINNNTAICVEGKLVDETDVYWHSNVIIERIKHNELRTLSGNIYVLKGLIDRVSMKEAGYPSIFTRKFMFGFPENWKEYIDNFLEQLRAEEKTKSKTRQKTTRSQDKQKSIKNDGEDKQTDVLQKANITYHLNGDSLERTEVLNVPIDPLNSLEQSTPDKERKHLPVSQKKAYVLITPLRTTKSIVQRCGEHSLSFEGITDFSKAKHQEESESDVHETPSPTCKSLETFEHRVGYEGNTKEDCDECDIITVKHIQLPCLKSKEMLTNNFKKKNKLPSKLQKTEKQIVSLYKQSSSHLSSEENEVEIKSKTRARNTRLNQERKNTSNITKDILLISESKGESDSYITPKRLRSSAKGSHNKSDVSKTFLIEVKASDTTNRQQVLDHLPDLVDDGEWTEQELQKLHRAFTSLPKYKPGFWSDVAMAVGSRTADECQKKYTEEPQGRGSQKHVSKKKQADFKVQNDEEDSTDDKKTIKITAREGTLKRKRQMRECLEHLPKDNHDDFFTATPLQKQRIRLPSFQFSQDDAALLCMDRNPASPPSVTATLTSTTPQCSHVSPSMLASVERNDCDKYVYHMQKNAKKYGKSKGGLVWGNIRKKTVETDLSSPIPTRKALFNKDLDENTDIPKFFIDDIESDEEEKDYYFSNSD
SIO_010081: Mis18bp1
subclass of: SO_0000673
so part of: Mis18bp1
location: join(4930208..4930721,4933373..4933827,4937502..4937575,4939175..4939305,4940061..4940148,4941362..4941510,4951493..4952294,4956731..4956903,4959255..4959415,4961392..4961540,4963429..4963528,4967205..4967259,4967432..4967526)
location: region:4930208-4967526:1
so has part: feature:4930208-4930721:1:exon
so has part: feature:4933373-4933827:1:exon
so has part: feature:4937502-4937575:1:exon
so has part: feature:4939175-4939305:1:exon
so has part: feature:4940061-4940148:1:exon
so has part: feature:4941362-4941510:1:exon
so has part: feature:4951493-4952294:1:exon
so has part: feature:4956731-4956903:1:exon
so has part: feature:4959255-4959415:1:exon
so has part: feature:4961392-4961540:1:exon
so has part: feature:4963429-4963528:1:exon
so has part: feature:4967205-4967259:1:exon
so has part: feature:4967432-4967526:1:exon

XP_034370286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4930208-4930721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4933373-4933827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4937502-4937575:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4939175-4939305:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4940061-4940148:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4941362-4941510:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4951493-4952294:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4956731-4956903:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4959255-4959415:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4961392-4961540:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4963429-4963528:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4967205-4967259:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4967432-4967526:1:exon

Fancm
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Fancm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4970710..5024198)
location: region:4970710-5024198:-1
so has part: feature:4970710-5024198:-1:exon
subclass of: SO_0000010

117717093
type: Gene
SIO_000068: ncbigene

position:4970710:-1
position: 4970710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5024198:-1
position: 5024198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4970710-5024198:-1:exon

Fancm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fancm
product: FA complementation group M, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514323.1
SIO_010081: Fancm
subclass of: SO_0000673
so part of: Fancm
location: complement(join(4970710..4971253,4974272..4974563,4976106..4976478,4979145..4979705,4980825..4980931,4983014..4983170,4984936..4985067,4986628..4986690,4986791..4986876,4994802..4996725,4997895..4998050,4998946..4999097,5001924..5002128,5006446..5006630,5007394..5007480,5008578..5008706,5009865..5009997,5012253..5012384,5014871..5015029,5019428..5019505,5022917..5023089,5023623..5024198))
location: region:4970710-5024198:-1
so has part: feature:5023623-5024198:-1:exon
so has part: feature:5022917-5023089:-1:exon
so has part: feature:5019428-5019505:-1:exon
so has part: feature:5014871-5015029:-1:exon
so has part: feature:5012253-5012384:-1:exon
so has part: feature:5009865-5009997:-1:exon
so has part: feature:5008578-5008706:-1:exon
so has part: feature:5007394-5007480:-1:exon
so has part: feature:5006446-5006630:-1:exon
so has part: feature:5001924-5002128:-1:exon
so has part: feature:4998946-4999097:-1:exon
so has part: feature:4997895-4998050:-1:exon
so has part: feature:4994802-4996725:-1:exon
so has part: feature:4986791-4986876:-1:exon
so has part: feature:4986628-4986690:-1:exon
so has part: feature:4984936-4985067:-1:exon
so has part: feature:4983014-4983170:-1:exon
so has part: feature:4980825-4980931:-1:exon
so has part: feature:4979145-4979705:-1:exon
so has part: feature:4976106-4976478:-1:exon
so has part: feature:4974272-4974563:-1:exon
so has part: feature:4970710-4971253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5023623-5024198:-1:exon

position:5023623:-1
position: 5023623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5022917-5023089:-1:exon

position:5022917:-1
position: 5022917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5023089:-1
position: 5023089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5019428-5019505:-1:exon

position:5019428:-1
position: 5019428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5019505:-1
position: 5019505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5014871-5015029:-1:exon

position:5014871:-1
position: 5014871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5015029:-1
position: 5015029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5012253-5012384:-1:exon

position:5012253:-1
position: 5012253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5012384:-1
position: 5012384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5009865-5009997:-1:exon

position:5009865:-1
position: 5009865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5009997:-1
position: 5009997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5008578-5008706:-1:exon

position:5008578:-1
position: 5008578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5008706:-1
position: 5008706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5007394-5007480:-1:exon

position:5007394:-1
position: 5007394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5007480:-1
position: 5007480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5006446-5006630:-1:exon

position:5006446:-1
position: 5006446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5006630:-1
position: 5006630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5001924-5002128:-1:exon

position:5001924:-1
position: 5001924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5002128:-1
position: 5002128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4998946-4999097:-1:exon

position:4998946:-1
position: 4998946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4999097:-1
position: 4999097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4997895-4998050:-1:exon

position:4997895:-1
position: 4997895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4998050:-1
position: 4998050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4994802-4996725:-1:exon

position:4994802:-1
position: 4994802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4996725:-1
position: 4996725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4986791-4986876:-1:exon

position:4986791:-1
position: 4986791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4986876:-1
position: 4986876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4986628-4986690:-1:exon

position:4986628:-1
position: 4986628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4986690:-1
position: 4986690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4984936-4985067:-1:exon

position:4984936:-1
position: 4984936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4985067:-1
position: 4985067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4983014-4983170:-1:exon

position:4983014:-1
position: 4983014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4983170:-1
position: 4983170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4980825-4980931:-1:exon

position:4980825:-1
position: 4980825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4980931:-1
position: 4980931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4979145-4979705:-1:exon

position:4979145:-1
position: 4979145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4979705:-1
position: 4979705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4976106-4976478:-1:exon

position:4976106:-1
position: 4976106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4976478:-1
position: 4976478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4974272-4974563:-1:exon

position:4974272:-1
position: 4974272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4974563:-1
position: 4974563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4970710-4971253:-1:exon

position:4971253:-1
position: 4971253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Fancm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fancm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group M protein isoform X2
translation: MSGRQRTLFQTWGPSLVRGAGAPGCGQPRSPAVAEALPEEDDDEVLLVAAYEAERQLDLGDGGFCAAAGALWIYPTNCPVRDYQLDISRTALFCNTLVCLPTGLGKTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHMAEMTGSTQAINRKEIWSSRRVLFLTPQVMVNDLTRGAVPAAHVKCLVVDEAHKALGNYAYCQVVRELVKHTNHFRILALTATPGSDVKAVQQVITNLRIGKIELRSEDSPDILPYSHERRVEKLVVPLGEELGAIQKTYIQILETFASSLIQRNVLMKRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLSGIMDGTKGMTRAKNELSRNEDFMKLYTHLQNVFAHTRDPAAASDALAFQKGNKEKKFVYSHPKLKKLEEVILEHFKSWNAKNTTEKKYHESRVMIFSSFRDSVEEIAEMLLQHQPVIRVMTFVGHASGKNTKGFTQKEQLQTYNQSQSNKKNIYKAISGSRQVLQLYQESPRMVPDKINPELHKMFITHSVYEPEKARSVQRKSFSSRGGTRASNSNKDGLLSEEEFNLWNRLYRLGDSDTVKGVTLPQSHFLSVQEDRATQEPTTGIHQLSLSEWSVWQDHPLPTHQVDHSDRCHHFISIMQMIEGMRHEENECSYELKIKPFLQMEDICSKYNAPRNRYNNVASVTSIAHKESSFRPRVDAGGSLSVIESEEERATTVKQTDSEWTKITSLRGKAFRAVGKGQTREQSGGDDADDADDDADDADTDFSDTDRHSPARAVSQVERPRGERMADVGRISILGAVTEDDSHPGTLLMECQITDKSLARYSLDSGYSSFSDEKSVSSNLFLPLEEELYTDRAAEQFYNCQPVTEEVLANVERFLSCSPPSLSGLSDVEYDISQCFELDNVSCSPYPEHEHSHKPGSPYPEREHSHKPAFLASHSAGNSQQNLELNSAKRINHPSEKYCLPGTTHNKISDQPSFSDSDSKSHNIENQNLTSNSYGQIQVNLENNLDDENSHEDSEAPVVFTDEDESLLLFEDDLKKVEDVTEDLNGAGLPPVSSVNQPLSVSDETLTGVVPPVSRFFISDELLLDDDSEPEDQVICDTKSWKCHEGVEDGHEELKTKEQTFDCSADLFSVTFDLGFCSSGSDDEISARASERSSALRAGNVPSRSSDKETKDASLTSGPLGGTISPIPTEEAQWSPWAQNEECASFHFAPSSPVKERVMSTPLSKSHTSSKTGAHMLKTLDSTREKAGGQGFKVTLNPRLDNLGFSVAETKSSDQLVVHQSPQHPEVEHLTSESEDDVFLRKTKKPKGNVLKSPEYQKNNEVDSPIHVVKKSRVLRSELSSSDDESENFHRPCPRLKHFKDRNRNTRKGSEAQKKRIQVKTLARRFLDDEAAVSGEDADCVSSDEGDDSENEQDSSLLDFVNDRTQLSQAINDSDMRAIYMKSVRSPLMGTKYKMVREKHTNRNIFSQIPEQDENYLEDSFCVDEEESCKSLSSEEEICVDFNLTKDSFTDEDRRYKTRYAVKRRQMNKRQNYTRSGKKLSRIILPEEESSEEENTASDREDSGAGGRAADEHTQQGQRWASGPSGSSVQPKILSNPAGNQSSGQRLQLLPNMKDAVPRALNLKAQSHNPIKSPSPPCPGAESGKERGNRPVQVKADEDEHSATSAAPCSTFLPHVAEVQTAPRHPQEGNRACILVDSREITTGLEIISSLRTVHGLRVEICPLNGCDYIVSNRMVVERKSQSEMSSNTGKNKFIEQIQRLQSMFQRICVIVEKDREKAGDTSKMFRRSKCYDSLLTALVGAGIRILFSSGQEETADLLKELSLVEQRKNVGIHIPALLSPSKREALQFYLSIPSVSYITALNMCHQFSSVKKMANSSPEEIFTCAQVTRQKAEEIYKYIHYIFDMQMLPNDLNQERQKSDT
SIO_010081: Fancm
subclass of: SO_0000673
so part of: Fancm
location: complement(join(4971115..4971253,4974272..4974563,4976106..4976478,4979145..4979705,4980825..4980931,4983014..4983170,4984936..4985067,4986628..4986690,4986791..4986876,4994802..4996725,4997895..4998050,4998946..4999097,5001924..5002128,5006446..5006630,5007394..5007480,5008578..5008706,5009865..5009997,5012253..5012384,5014871..5015029,5019428..5019505,5022917..5023089,5023623..5024097))
location: region:4971115-5024097:-1
so has part: feature:5023623-5024097:-1:exon
so has part: feature:5022917-5023089:-1:exon
so has part: feature:5019428-5019505:-1:exon
so has part: feature:5014871-5015029:-1:exon
so has part: feature:5012253-5012384:-1:exon
so has part: feature:5009865-5009997:-1:exon
so has part: feature:5008578-5008706:-1:exon
so has part: feature:5007394-5007480:-1:exon
so has part: feature:5006446-5006630:-1:exon
so has part: feature:5001924-5002128:-1:exon
so has part: feature:4998946-4999097:-1:exon
so has part: feature:4997895-4998050:-1:exon
so has part: feature:4994802-4996725:-1:exon
so has part: feature:4986791-4986876:-1:exon
so has part: feature:4986628-4986690:-1:exon
so has part: feature:4984936-4985067:-1:exon
so has part: feature:4983014-4983170:-1:exon
so has part: feature:4980825-4980931:-1:exon
so has part: feature:4979145-4979705:-1:exon
so has part: feature:4976106-4976478:-1:exon
so has part: feature:4974272-4974563:-1:exon
so has part: feature:4971115-4971253:-1:exon

XP_034370214.1
type: Protein
SIO_000068: ncbiprotein

position:4971115:-1
position: 4971115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5024097:-1
position: 5024097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5023623-5024097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5022917-5023089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5019428-5019505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5014871-5015029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5012253-5012384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5009865-5009997:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5008578-5008706:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5007394-5007480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5006446-5006630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5001924-5002128:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4998946-4999097:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4997895-4998050:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4994802-4996725:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4986791-4986876:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4986628-4986690:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4984936-4985067:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4983014-4983170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4980825-4980931:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4979145-4979705:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4976106-4976478:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4974272-4974563:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4971115-4971253:-1:exon

Fancm
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fancm
product: FA complementation group M, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514322.1
SIO_010081: Fancm
subclass of: SO_0000673
so part of: Fancm
location: complement(join(5001916..5002128,5003911..5004117,5006446..5006630,5007394..5007480,5008578..5008706,5009865..5009997,5012253..5012384,5014871..5015029,5019428..5019505,5022917..5023089,5023623..5024097))
location: region:5001916-5024097:-1
so has part: feature:5023623-5024097:-1:exon
so has part: feature:5022917-5023089:-1:exon
so has part: feature:5019428-5019505:-1:exon
so has part: feature:5014871-5015029:-1:exon
so has part: feature:5012253-5012384:-1:exon
so has part: feature:5009865-5009997:-1:exon
so has part: feature:5008578-5008706:-1:exon
so has part: feature:5007394-5007480:-1:exon
so has part: feature:5006446-5006630:-1:exon
so has part: feature:5003911-5004117:-1:exon
so has part: feature:5001916-5002128:-1:exon

position:5001916:-1
position: 5001916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5023623-5024097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5022917-5023089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5019428-5019505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5014871-5015029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5012253-5012384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5009865-5009997:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5008578-5008706:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5007394-5007480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5006446-5006630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5003911-5004117:-1:exon

position:5003911:-1
position: 5003911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5004117:-1
position: 5004117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5001916-5002128:-1:exon

Fancm
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fancm
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group M protein isoform X1
translation: MSGRQRTLFQTWGPSLVRGAGAPGCGQPRSPAVAEALPEEDDDEVLLVAAYEAERQLDLGDGGFCAAAGALWIYPTNCPVRDYQLDISRTALFCNTLVCLPTGLGKTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQMEACFHVMGIPQSHMAEMTGSTQAINRKEIWSSRRVLFLTPQVMVNDLTRGAVPAAHVKCLVVDEAHKALGNYAYCQVVRELVKHTNHFRILALTATPGSDVKAVQQVITNLRIGKIELRSEDSPDILPYSHERRVEKLVVPLGEELGAIQKTYIQILETFASSLIQRNVLMKRDIPNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYFFLSGIMDGTKGMTRAKNELSRNEDFMKLYTHLQNVFAHTRDPAAASDALAFQKGNKEKKFVYSHPKLKKLEEVILEHFKSWNAKNTTEKKYHESRVMIFSSFRDSVEEIAEMLLQHQPVIRVMTFVGHASGKNTKGFTQKEQLQVVRQFREGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQRMGRTGRRRQGRIVVILAEGREERTYNQSQSNKKNIYKAISGSRQVLQLYQESPRMVPDKINPELHKMFITHSVYEPEKARSVQRKSFSSRGGK
SIO_010081: Fancm
subclass of: SO_0000673
so part of: Fancm
location: complement(join(5001916..5002128,5003911..5004117,5006446..5006630,5007394..5007480,5008578..5008706,5009865..5009997,5012253..5012384,5014871..5015029,5019428..5019505,5022917..5023089,5023623..5024097))
location: region:5001916-5024097:-1
so has part: feature:5023623-5024097:-1:exon
so has part: feature:5022917-5023089:-1:exon
so has part: feature:5019428-5019505:-1:exon
so has part: feature:5014871-5015029:-1:exon
so has part: feature:5012253-5012384:-1:exon
so has part: feature:5009865-5009997:-1:exon
so has part: feature:5008578-5008706:-1:exon
so has part: feature:5007394-5007480:-1:exon
so has part: feature:5006446-5006630:-1:exon
so has part: feature:5003911-5004117:-1:exon
so has part: feature:5001916-5002128:-1:exon

XP_034370213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5023623-5024097:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5022917-5023089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5019428-5019505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5014871-5015029:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5012253-5012384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5009865-5009997:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5008578-5008706:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5007394-5007480:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5006446-5006630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5003911-5004117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5001916-5002128:-1:exon

Fkbp3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Fkbp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5026103..5037373
location: region:5026103-5037373:1
so has part: feature:5026103-5037373:1:exon
subclass of: SO_0000010

117717095
type: Gene
SIO_000068: ncbigene

position:5026103:1
position: 5026103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5037373:1
position: 5037373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5026103-5037373:1:exon

Fkbp3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fkbp3
product: FKBP prolyl isomerase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 1 long SRA read, 11 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514330.1
SIO_010081: Fkbp3
subclass of: SO_0000673
so part of: Fkbp3
location: join(5026103..5026319,5029897..5029998,5030953..5031060,5033137..5033272,5034168..5034235,5036053..5036150,5037063..5037373)
location: region:5026103-5037373:1
so has part: feature:5026103-5026319:1:exon
so has part: feature:5029897-5029998:1:exon
so has part: feature:5030953-5031060:1:exon
so has part: feature:5033137-5033272:1:exon
so has part: feature:5034168-5034235:1:exon
so has part: feature:5036053-5036150:1:exon
so has part: feature:5037063-5037373:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5026103-5026319:1:exon

position:5026319:1
position: 5026319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5029897-5029998:1:exon

position:5029897:1
position: 5029897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5029998:1
position: 5029998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5030953-5031060:1:exon

position:5030953:1
position: 5030953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5031060:1
position: 5031060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5033137-5033272:1:exon

position:5033137:1
position: 5033137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5033272:1
position: 5033272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5034168-5034235:1:exon

position:5034168:1
position: 5034168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5034235:1
position: 5034235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5036053-5036150:1:exon

position:5036053:1
position: 5036053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5036150:1
position: 5036150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5037063-5037373:1:exon

position:5037063:1
position: 5037063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fkbp3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fkbp3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP3
translation: MAAAVPQRAWTVEQLRSEQLPKKDIIKFLQDHGSDSFLAEHKLLGNIKNVAKTANKDHLVTAYNHLFESKRFKGTETISKVSEQVKNVKLNDDKPKESKSEETLDEGPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID
SIO_010081: Fkbp3
subclass of: SO_0000673
so part of: Fkbp3
location: join(5026212..5026319,5029897..5029998,5030953..5031060,5033137..5033272,5034168..5034235,5036053..5036150,5037063..5037117)
location: region:5026212-5037117:1
so has part: feature:5026212-5026319:1:exon
so has part: feature:5029897-5029998:1:exon
so has part: feature:5030953-5031060:1:exon
so has part: feature:5033137-5033272:1:exon
so has part: feature:5034168-5034235:1:exon
so has part: feature:5036053-5036150:1:exon
so has part: feature:5037063-5037117:1:exon

XP_034370221.1
type: Protein
SIO_000068: ncbiprotein

position:5026212:1
position: 5026212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5037117:1
position: 5037117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5026212-5026319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5029897-5029998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5030953-5031060:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5033137-5033272:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5034168-5034235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5036053-5036150:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5037063-5037117:1:exon

Prpf39
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Prpf39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5036387..5064297)
location: region:5036387-5064297:-1
so has part: feature:5036387-5064297:-1:exon
subclass of: SO_0000010

117717094
type: Gene
SIO_000068: ncbigene

position:5036387:-1
position: 5036387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5064297:-1
position: 5064297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5036387-5064297:-1:exon

Prpf39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Prpf39
product: pre-mRNA processing factor 39, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 long SRA reads, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034514325.1
SIO_010081: Prpf39
subclass of: SO_0000673
so part of: Prpf39
location: complement(join(5036387..5038366,5038525..5038639,5039546..5039620,5042021..5042205,5043586..5043854,5044381..5044507,5044826..5044990,5046009..5046116,5046641..5046806,5052522..5052689,5056904..5057022,5057151..5057485,5057673..5057798,5058245..5058591,5064160..5064297))
location: region:5036387-5064297:-1
so has part: feature:5064160-5064297:-1:exon
so has part: feature:5058245-5058591:-1:exon
so has part: feature:5057673-5057798:-1:exon
so has part: feature:5057151-5057485:-1:exon
so has part: feature:5056904-5057022:-1:exon
so has part: feature:5052522-5052689:-1:exon
so has part: feature:5046641-5046806:-1:exon
so has part: feature:5046009-5046116:-1:exon
so has part: feature:5044826-5044990:-1:exon
so has part: feature:5044381-5044507:-1:exon
so has part: feature:5043586-5043854:-1:exon
so has part: feature:5042021-5042205:-1:exon
so has part: feature:5039546-5039620:-1:exon
so has part: feature:5038525-5038639:-1:exon
so has part: feature:5036387-5038366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5064160-5064297:-1:exon

position:5064160:-1
position: 5064160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5058245-5058591:-1:exon

position:5058245:-1
position: 5058245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5058591:-1
position: 5058591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5057673-5057798:-1:exon

position:5057673:-1
position: 5057673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5057798:-1
position: 5057798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5057151-5057485:-1:exon

position:5057151:-1
position: 5057151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5057485:-1
position: 5057485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5056904-5057022:-1:exon

position:5056904:-1
position: 5056904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5057022:-1
position: 5057022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5052522-5052689:-1:exon

position:5052522:-1
position: 5052522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5052689:-1
position: 5052689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5046641-5046806:-1:exon

position:5046641:-1
position: 5046641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5046806:-1
position: 5046806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5046009-5046116:-1:exon

position:5046009:-1
position: 5046009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5046116:-1
position: 5046116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5044826-5044990:-1:exon

position:5044826:-1
position: 5044826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5044990:-1
position: 5044990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5044381-5044507:-1:exon

position:5044381:-1
position: 5044381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5044507:-1
position: 5044507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5043586-5043854:-1:exon

position:5043586:-1
position: 5043586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5043854:-1
position: 5043854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5042021-5042205:-1:exon

position:5042021:-1
position: 5042021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5042205:-1
position: 5042205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5039546-5039620:-1:exon

position:5039546:-1
position: 5039546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5039620:-1
position: 5039620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5038525-5038639:-1:exon

position:5038525:-1
position: 5038525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5038639:-1
position: 5038639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5036387-5038366:-1:exon

position:5038366:-1
position: 5038366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Prpf39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Prpf39
product: pre-mRNA processing factor 39, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 6 long SRA reads, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034514324.1
SIO_010081: Prpf39
subclass of: SO_0000673
so part of: Prpf39
location: complement(join(5036387..5038366,5038525..5038639,5039546..5039620,5042021..5042205,5043586..5043854,5044381..5044507,5044826..5044990,5046009..5046116,5046641..5046806,5052522..5052689,5056904..5057022,5057673..5057798,5058245..5058591,5064160..5064292))
location: region:5036387-5064292:-1
so has part: feature:5064160-5064292:-1:exon
so has part: feature:5058245-5058591:-1:exon
so has part: feature:5057673-5057798:-1:exon
so has part: feature:5056904-5057022:-1:exon
so has part: feature:5052522-5052689:-1:exon
so has part: feature:5046641-5046806:-1:exon
so has part: feature:5046009-5046116:-1:exon
so has part: feature:5044826-5044990:-1:exon
so has part: feature:5044381-5044507:-1:exon
so has part: feature:5043586-5043854:-1:exon
so has part: feature:5042021-5042205:-1:exon
so has part: feature:5039546-5039620:-1:exon
so has part: feature:5038525-5038639:-1:exon
so has part: feature:5036387-5038366:-1:exon

position:5064292:-1
position: 5064292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5064160-5064292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5058245-5058591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5057673-5057798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5056904-5057022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5052522-5052689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5046641-5046806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5046009-5046116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5044826-5044990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5044381-5044507:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5043586-5043854:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5042021-5042205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5039546-5039620:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5038525-5038639:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5036387-5038366:-1:exon

Prpf39
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: Prpf39
product: pre-mRNA processing factor 39, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 4 long SRA reads, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004607862.1
SIO_010081: Prpf39
so part of: Prpf39
location: complement(join(5036387..5038366,5038525..5038639,5039546..5039620,5042021..5042205,5043586..5043854,5044381..5044507,5044612..5044711,5044826..5044990,5046009..5046116,5046641..5046806,5052522..5052689,5056904..5057022,5057151..5057313,5057417..5057485,5057673..5057798,5058245..5058591,5064160..5064292))
location: region:5036387-5064292:-1
so has part: feature:5064160-5064292:-1:exon
so has part: feature:5058245-5058591:-1:exon
so has part: feature:5057673-5057798:-1:exon
so has part: feature:5057417-5057485:-1:exon
so has part: feature:5057151-5057313:-1:exon
so has part: feature:5056904-5057022:-1:exon
so has part: feature:5052522-5052689:-1:exon
so has part: feature:5046641-5046806:-1:exon
so has part: feature:5046009-5046116:-1:exon
so has part: feature:5044826-5044990:-1:exon
so has part: feature:5044612-5044711:-1:exon
so has part: feature:5044381-5044507:-1:exon
so has part: feature:5043586-5043854:-1:exon
so has part: feature:5042021-5042205:-1:exon
so has part: feature:5039546-5039620:-1:exon
so has part: feature:5038525-5038639:-1:exon
so has part: feature:5036387-5038366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5064160-5064292:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5058245-5058591:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5057673-5057798:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5057417-5057485:-1:exon

position:5057417:-1
position: 5057417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5057151-5057313:-1:exon

position:5057313:-1
position: 5057313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5056904-5057022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5052522-5052689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5046641-5046806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5046009-5046116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5044826-5044990:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5044612-5044711:-1:exon

position:5044612:-1
position: 5044612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5044711:-1
position: 5044711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5044381-5044507:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5043586-5043854:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5042021-5042205:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5039546-5039620:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5038525-5038639:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5036387-5038366:-1:exon

Prpf39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Prpf39
product: pre-mRNA processing factor 39, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514327.1
SIO_010081: Prpf39
subclass of: SO_0000673
so part of: Prpf39
location: complement(join(5037283..5038366,5038525..5038639,5039546..5039620,5042021..5042205,5043586..5043854,5044381..5044507,5044826..5044990,5046009..5046116,5046641..5046806,5052522..5052689,5056904..5057022,5057151..5057313,5057417..5057485,5057673..5057798))
location: region:5037283-5057798:-1
so has part: feature:5057673-5057798:-1:exon
so has part: feature:5057417-5057485:-1:exon
so has part: feature:5057151-5057313:-1:exon
so has part: feature:5056904-5057022:-1:exon
so has part: feature:5052522-5052689:-1:exon
so has part: feature:5046641-5046806:-1:exon
so has part: feature:5046009-5046116:-1:exon
so has part: feature:5044826-5044990:-1:exon
so has part: feature:5044381-5044507:-1:exon
so has part: feature:5043586-5043854:-1:exon
so has part: feature:5042021-5042205:-1:exon
so has part: feature:5039546-5039620:-1:exon
so has part: feature:5038525-5038639:-1:exon
so has part: feature:5037283-5038366:-1:exon

position:5037283:-1
position: 5037283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5057673-5057798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5057417-5057485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5057151-5057313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5056904-5057022:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5052522-5052689:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5046641-5046806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5046009-5046116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5044826-5044990:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5044381-5044507:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5043586-5043854:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5042021-5042205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5039546-5039620:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5038525-5038639:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5037283-5038366:-1:exon

Prpf39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Prpf39
product: pre-mRNA processing factor 39, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514326.1
SIO_010081: Prpf39
subclass of: SO_0000673
so part of: Prpf39
location: complement(join(5037283..5038366,5038525..5038639,5039546..5039620,5042021..5042205,5043586..5043854,5044381..5044507,5044826..5044990,5046009..5046116,5046641..5046806,5052522..5052689,5056904..5057022,5057151..5057665))
location: region:5037283-5057665:-1
so has part: feature:5057151-5057665:-1:exon
so has part: feature:5056904-5057022:-1:exon
so has part: feature:5052522-5052689:-1:exon
so has part: feature:5046641-5046806:-1:exon
so has part: feature:5046009-5046116:-1:exon
so has part: feature:5044826-5044990:-1:exon
so has part: feature:5044381-5044507:-1:exon
so has part: feature:5043586-5043854:-1:exon
so has part: feature:5042021-5042205:-1:exon
so has part: feature:5039546-5039620:-1:exon
so has part: feature:5038525-5038639:-1:exon
so has part: feature:5037283-5038366:-1:exon

position:5057665:-1
position: 5057665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5057151-5057665:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5056904-5057022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5052522-5052689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5046641-5046806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5046009-5046116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5044826-5044990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5044381-5044507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5043586-5043854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5042021-5042205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5039546-5039620:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5038525-5038639:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5037283-5038366:-1:exon

Prpf39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Prpf39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-processing factor 39 isoform X1
translation: MQNSHMDEYRNSDNGSTGNSSEVVVVEHPDFSTEIMNVTEMEQSPDASPSAHASTEENEMANAVDLPVTETEGNFPPEFEKFWKTVETNPQDFTGWVYLLQYVEQENHLMAARKAFDKFFIHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPETNSTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKPMAHMLWAAFEEQQGNINEARIILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAMEKDKENTKLYLNLLEMEYSCDLKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDSLKRKAENGSEEPEEKKAHTEDMSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQYYPPPPT
SIO_010081: Prpf39
subclass of: SO_0000673
so part of: Prpf39
location: complement(join(5038310..5038366,5038525..5038639,5039546..5039620,5042021..5042205,5043586..5043854,5044381..5044507,5044826..5044990,5046009..5046116,5046641..5046806,5052522..5052689,5056904..5057022,5057673..5057798,5058245..5058562))
location: region:5038310-5058562:-1
so has part: feature:5058245-5058562:-1:exon
so has part: feature:5057673-5057798:-1:exon
so has part: feature:5056904-5057022:-1:exon
so has part: feature:5052522-5052689:-1:exon
so has part: feature:5046641-5046806:-1:exon
so has part: feature:5046009-5046116:-1:exon
so has part: feature:5044826-5044990:-1:exon
so has part: feature:5044381-5044507:-1:exon
so has part: feature:5043586-5043854:-1:exon
so has part: feature:5042021-5042205:-1:exon
so has part: feature:5039546-5039620:-1:exon
so has part: feature:5038525-5038639:-1:exon
so has part: feature:5038310-5038366:-1:exon

XP_034370215.1
type: Protein
SIO_000068: ncbiprotein

position:5038310:-1
position: 5038310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5058562:-1
position: 5058562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5058245-5058562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5057673-5057798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5056904-5057022:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5052522-5052689:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5046641-5046806:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5046009-5046116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5044826-5044990:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5044381-5044507:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5043586-5043854:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5042021-5042205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5039546-5039620:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5038525-5038639:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5038310-5038366:-1:exon

Prpf39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Prpf39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-processing factor 39 isoform X2
translation: MQGLLRFEDQDSARGDQNIAMFYPTSTQMVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPETNSTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKPMAHMLWAAFEEQQGNINEARIILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAMEKDKENTKLYLNLLEMEYSCDLKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDSLKRKAENGSEEPEEKKAHTEDMSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQYYPPPPT
SIO_010081: Prpf39
subclass of: SO_0000673
so part of: Prpf39
location: complement(join(5038310..5038366,5038525..5038639,5039546..5039620,5042021..5042205,5043586..5043854,5044381..5044507,5044826..5044990,5046009..5046116,5046641..5046806,5052522..5052689,5056904..5057022,5057151..5057237))
location: region:5038310-5057237:-1
so has part: feature:5057151-5057237:-1:exon
so has part: feature:5056904-5057022:-1:exon
so has part: feature:5052522-5052689:-1:exon
so has part: feature:5046641-5046806:-1:exon
so has part: feature:5046009-5046116:-1:exon
so has part: feature:5044826-5044990:-1:exon
so has part: feature:5044381-5044507:-1:exon
so has part: feature:5043586-5043854:-1:exon
so has part: feature:5042021-5042205:-1:exon
so has part: feature:5039546-5039620:-1:exon
so has part: feature:5038525-5038639:-1:exon
so has part: feature:5038310-5038366:-1:exon

XP_034370216.1
type: Protein
SIO_000068: ncbiprotein

position:5057237:-1
position: 5057237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5057151-5057237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5056904-5057022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5052522-5052689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5046641-5046806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5046009-5046116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5044826-5044990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5044381-5044507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5043586-5043854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5042021-5042205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5039546-5039620:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5038525-5038639:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5038310-5038366:-1:exon

Prpf39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Prpf39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-processing factor 39 isoform X2
translation: MQGLLRFEDQDSARGDQNIAMFYPTSTQMVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPETNSTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKPMAHMLWAAFEEQQGNINEARIILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAMEKDKENTKLYLNLLEMEYSCDLKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDSLKRKAENGSEEPEEKKAHTEDMSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQYYPPPPT
SIO_010081: Prpf39
subclass of: SO_0000673
so part of: Prpf39
location: complement(join(5038310..5038366,5038525..5038639,5039546..5039620,5042021..5042205,5043586..5043854,5044381..5044507,5044826..5044990,5046009..5046116,5046641..5046806,5052522..5052689,5056904..5057022,5057151..5057237))
location: region:5038310-5057237:-1
so has part: feature:5057151-5057237:-1:exon
so has part: feature:5056904-5057022:-1:exon
so has part: feature:5052522-5052689:-1:exon
so has part: feature:5046641-5046806:-1:exon
so has part: feature:5046009-5046116:-1:exon
so has part: feature:5044826-5044990:-1:exon
so has part: feature:5044381-5044507:-1:exon
so has part: feature:5043586-5043854:-1:exon
so has part: feature:5042021-5042205:-1:exon
so has part: feature:5039546-5039620:-1:exon
so has part: feature:5038525-5038639:-1:exon
so has part: feature:5038310-5038366:-1:exon

XP_034370217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5057151-5057237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5056904-5057022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5052522-5052689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5046641-5046806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5046009-5046116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5044826-5044990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5044381-5044507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5043586-5043854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5042021-5042205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5039546-5039620:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5038525-5038639:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5038310-5038366:-1:exon

Prpf39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Prpf39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-processing factor 39 isoform X2
translation: MQGLLRFEDQDSARGDQNIAMFYPTSTQMVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPETNSTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAVYDRILGIPTQLYSHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKPMAHMLWAAFEEQQGNINEARIILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAIKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAMEKDKENTKLYLNLLEMEYSCDLKQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDSLKRKAENGSEEPEEKKAHTEDMSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQYYPPPPT
SIO_010081: Prpf39
subclass of: SO_0000673
so part of: Prpf39
location: complement(join(5038310..5038366,5038525..5038639,5039546..5039620,5042021..5042205,5043586..5043854,5044381..5044507,5044826..5044990,5046009..5046116,5046641..5046806,5052522..5052689,5056904..5057022,5057151..5057237))
location: region:5038310-5057237:-1
so has part: feature:5057151-5057237:-1:exon
so has part: feature:5056904-5057022:-1:exon
so has part: feature:5052522-5052689:-1:exon
so has part: feature:5046641-5046806:-1:exon
so has part: feature:5046009-5046116:-1:exon
so has part: feature:5044826-5044990:-1:exon
so has part: feature:5044381-5044507:-1:exon
so has part: feature:5043586-5043854:-1:exon
so has part: feature:5042021-5042205:-1:exon
so has part: feature:5039546-5039620:-1:exon
so has part: feature:5038525-5038639:-1:exon
so has part: feature:5038310-5038366:-1:exon

XP_034370218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5057151-5057237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5056904-5057022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5052522-5052689:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5046641-5046806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5046009-5046116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5044826-5044990:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5044381-5044507:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5043586-5043854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5042021-5042205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5039546-5039620:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5038525-5038639:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5038310-5038366:-1:exon

LOC117717431
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717431
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5043450..5043535)
location: region:5043450-5043535:-1
so has part: feature:5043450-5043535:-1:exon
subclass of: SO_0000578

117717431
type: Gene
SIO_000068: ncbigene

position:5043450:-1
position: 5043450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5043535:-1
position: 5043535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5043450-5043535:-1:exon

LOC117717431
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117717431
product: small nucleolar RNA SNORD127
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01186
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607918.1
SIO_010081: LOC117717431
subclass of: SO_0000673
so part of: LOC117717431
location: complement(5043450..5043535)
location: region:5043450-5043535:-1
so has part: feature:5043450-5043535:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5043450-5043535:-1:exon

Togaram1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Togaram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5070218..5134814)
location: region:5070218-5134814:-1
so has part: feature:5070218-5134814:-1:exon
subclass of: SO_0000010

117716826
type: Gene
SIO_000068: ncbigene

position:5070218:-1
position: 5070218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5134814:-1
position: 5134814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5070218-5134814:-1:exon

Togaram1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Togaram1
product: TOG array regulator of axonemal microtubules 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 5 long SRA reads, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513910.1
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5070218..5071361,5072546..5072632,5073596..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5132511..5134814))
location: region:5070218-5134814:-1
so has part: feature:5132511-5134814:-1:exon
so has part: feature:5122772-5122928:-1:exon
so has part: feature:5121762-5121896:-1:exon
so has part: feature:5119346-5119642:-1:exon
so has part: feature:5117623-5117885:-1:exon
so has part: feature:5116758-5116996:-1:exon
so has part: feature:5114002-5114099:-1:exon
so has part: feature:5108114-5108209:-1:exon
so has part: feature:5102610-5102785:-1:exon
so has part: feature:5099994-5100147:-1:exon
so has part: feature:5097173-5097326:-1:exon
so has part: feature:5093869-5093974:-1:exon
so has part: feature:5093188-5093423:-1:exon
so has part: feature:5090861-5091019:-1:exon
so has part: feature:5086196-5086322:-1:exon
so has part: feature:5084052-5084170:-1:exon
so has part: feature:5080831-5081020:-1:exon
so has part: feature:5073596-5073815:-1:exon
so has part: feature:5072546-5072632:-1:exon
so has part: feature:5070218-5071361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5132511-5134814:-1:exon

position:5132511:-1
position: 5132511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5122772-5122928:-1:exon

position:5122772:-1
position: 5122772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5122928:-1
position: 5122928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5121762-5121896:-1:exon

position:5121762:-1
position: 5121762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5121896:-1
position: 5121896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5119346-5119642:-1:exon

position:5119346:-1
position: 5119346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5119642:-1
position: 5119642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5117623-5117885:-1:exon

position:5117623:-1
position: 5117623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5117885:-1
position: 5117885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5116758-5116996:-1:exon

position:5116758:-1
position: 5116758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5116996:-1
position: 5116996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5114002-5114099:-1:exon

position:5114002:-1
position: 5114002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5114099:-1
position: 5114099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5108114-5108209:-1:exon

position:5108114:-1
position: 5108114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5108209:-1
position: 5108209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5102610-5102785:-1:exon

position:5102610:-1
position: 5102610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5102785:-1
position: 5102785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5099994-5100147:-1:exon

position:5099994:-1
position: 5099994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5100147:-1
position: 5100147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5097173-5097326:-1:exon

position:5097173:-1
position: 5097173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5097326:-1
position: 5097326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5093869-5093974:-1:exon

position:5093869:-1
position: 5093869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5093974:-1
position: 5093974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5093188-5093423:-1:exon

position:5093188:-1
position: 5093188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5093423:-1
position: 5093423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5090861-5091019:-1:exon

position:5090861:-1
position: 5090861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5091019:-1
position: 5091019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
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SIO_000300: 19
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position:5071361:-1
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Togaram1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Togaram1
product: TOG array regulator of axonemal microtubules 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 7 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034513907.1
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5070218..5071361,5072546..5072632,5073596..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5109497..5109646,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5132511..5134803))
location: region:5070218-5134803:-1
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position:5134803:-1
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reference: sequence
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urn:…
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SIO_000628: feature:5109497-5109646:-1:exon

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SIO_000300: 11
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SIO_000300: 13
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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 18
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urn:…
SIO_000300: 21
SIO_000628: feature:5070218-5071361:-1:exon

Togaram1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Togaram1
product: TOG array regulator of axonemal microtubules 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034513908.1
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5070218..5071361,5072546..5072632,5073596..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5130294..5130323,5132511..5134665))
location: region:5070218-5134665:-1
so has part: feature:5132511-5134665:-1:exon
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so has part: feature:5070218-5071361:-1:exon

position:5134665:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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position:5130294:-1
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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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SIO_000300: 9
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SIO_000300: 13
SIO_000628: feature:5093869-5093974:-1:exon

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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 18
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SIO_000300: 20
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urn:…
SIO_000300: 21
SIO_000628: feature:5070218-5071361:-1:exon

Togaram1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Togaram1
product: TOG array regulator of axonemal microtubules 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034513911.1
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5070218..5071361,5072546..5072632,5073600..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5109497..5109646,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5130294..5130323,5132511..5134665))
location: region:5070218-5134665:-1
so has part: feature:5132511-5134665:-1:exon
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urn:…
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urn:…
SIO_000300: 20
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position:5073600:-1
position: 5073600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5072546-5072632:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5070218-5071361:-1:exon

Togaram1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Togaram1
product: TOG array regulator of axonemal microtubules 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034513906.1
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5070218..5071361,5072546..5072632,5073596..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5109497..5109646,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5130294..5130323,5132511..5134665))
location: region:5070218-5134665:-1
so has part: feature:5132511-5134665:-1:exon
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urn:…
SIO_000300: 1
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SIO_000628: feature:5093188-5093423:-1:exon

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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:5070218-5071361:-1:exon

Togaram1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Togaram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOG array regulator of axonemal microtubules protein 1 isoform X4
translation: MAAAPSELLPLPPLATPGSYRLLSRCRPSAPGTDGRRSGGTMRGEKNYYCRGAAGDHGSCPATPSPLASTLLLPAEAVSTSWSGPGSGLSGGDEEETRLLQLLRTAPDPSEAFQALQAALPRRGGRLGFPRRKEALYRALGRVLVEGGSDEKRLCLQLLSDVLRGQGEAGQLEEAFSLALLPQLVVSLREDNPALRKDALQILHICLRRSSGQVLRTLIQGLESPDARLRASTALLLPVLLTPEDLLLGLDLTEVIISLARKLGDQEMEEESETAFSTLQQIGERLGQERFHSYISRLPSALRRHYNRRLESQYGSQVPYYLELEASGFSEDAAPCVVNLSSSNLKFGIIPQELHARLLDQEDYKNRTQAVEELKQLLGKFNPSSTPHSSLVGFISLLYNLLDDSNFKVVHGTLQVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKEVGPQQVLSLLLENLKHKHSRVREEVVNICICSLLTYPSEDFDLSKLSFDLAPALVDSKRRVRQAALEAFAVLASSLGSGKTNVLFKAVDTVELQDNGDGVMNAVQARLARKTLPRLTEQGFVEYAILMPTSAQGRSSHLAHGADTDWLMSGNRTQSAHCYCGDHTRDSMQLYGSYSPTICTRRVLSAGKGKNKLPWENEQPGVMGENQTSSSKDIKETEQFSAHDLIPSPKLKPSQGVPANDDLCFSKKRSSRNLFQSSRDFNSDSIPTCGAGNTANLQTNLSGKCGQLGLSQIGCKTGSVGSDLQFLGTANGHQDKVYAGLTFGSKTQQTFGSQSERTSSYSASNASPGPFILPSCPLSSPRTSPKHTSPLSVSPKKSQDNAISFSNSWPLKSFEGLSKPSPQKKLVNQKSSDPTGENFQEKTTPVQLTPALVRSPSSRRGLNGSKPVPPIPRGISLLPDKTDLSTVGHIKKQPDDIWKSEKDNLTIDISELNFRDKDLDQEEMQSSLRSLRNSAAKKRAKLSGSSSTSDVDSPDSAMKLELTIDSPSRSSSPNISSYSESGVYSQESLTSSLSTTPQGKRIMSDIFPTFGSKPCSTRLSSAKKISHATEQSSSTGFTRSSNLQQISSFDFTSTNTLSEDSVVVVGKGVFGNPNSVPTTCNQPVISSVENEDTFSVKPSIEPPSGVYGRAVQHNTPLYLDVENDKDTKVSIAKSTYDKMRQKRKEEKELFDAKDCERKETNPWERIKHPGTEKMTSENEPSPGIIPQYKERMSSVTHSPEIMDSLELRPFSKPEIALTEALRLLADEDWEKKMEGLNFVRCLAAFHSDLLNTKLHETIFAVVQEVKNLRSGVSRAAVVCLGDLFTYLKKSMDQELDTAVRALLHKAGESNTFIREDVDKALRAMVNNVTPARAVTSLINGGQSHLHIAVRRCTAQHLADVVECMEPERVSCGTKDMADRLLPAAAKFAQDSSQETRYYGRKMLFLMMGHPNFEKLLEKYIPSKDLPYIKESVKNLRQKGLGEIPLDTPSAKGRRSHTGSVGNTRSSSVSRDAFSSSEREVTEVREVPRKSAARNSLESAEYIKAITGLLNAKDFRDRINGIKQLLSDTENNQELVVGNIVKIFDAFKSRLHDSNSKVNLVALETMHKMIPLLRDNLSPIINMLIPAIVDNNLNSKNPGIYAAATNVVHALSQHVDNYLLLQPFCTKAQFLNGKAKQDMTEKLADIVMELYQRKPHATEQKVLVVLWHLLGNMTHSGSLPGAGGNIRTATAKLSKALFAQMGQSLLNQAASQPPHIKKSLEELLDVTVLSEL
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5071096..5071361,5072546..5072632,5073596..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5132511..5134562))
location: region:5071096-5134562:-1
so has part: feature:5132511-5134562:-1:exon
so has part: feature:5122772-5122928:-1:exon
so has part: feature:5121762-5121896:-1:exon
so has part: feature:5119346-5119642:-1:exon
so has part: feature:5117623-5117885:-1:exon
so has part: feature:5116758-5116996:-1:exon
so has part: feature:5114002-5114099:-1:exon
so has part: feature:5108114-5108209:-1:exon
so has part: feature:5102610-5102785:-1:exon
so has part: feature:5099994-5100147:-1:exon
so has part: feature:5097173-5097326:-1:exon
so has part: feature:5093869-5093974:-1:exon
so has part: feature:5093188-5093423:-1:exon
so has part: feature:5090861-5091019:-1:exon
so has part: feature:5086196-5086322:-1:exon
so has part: feature:5084052-5084170:-1:exon
so has part: feature:5080831-5081020:-1:exon
so has part: feature:5073596-5073815:-1:exon
so has part: feature:5072546-5072632:-1:exon
so has part: feature:5071096-5071361:-1:exon

XP_034369801.1
type: Protein
SIO_000068: ncbiprotein

position:5071096:-1
position: 5071096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5134562:-1
position: 5134562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5132511-5134562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5122772-5122928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5121762-5121896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5119346-5119642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5117623-5117885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5116758-5116996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5114002-5114099:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5108114-5108209:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5102610-5102785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5099994-5100147:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5097173-5097326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5093869-5093974:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5093188-5093423:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5090861-5091019:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5086196-5086322:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5084052-5084170:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5080831-5081020:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5073596-5073815:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5072546-5072632:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5071096-5071361:-1:exon

Togaram1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Togaram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOG array regulator of axonemal microtubules protein 1 isoform X2
translation: MAAAPSELLPLPPLATPGSYRLLSRCRPSAPGTDGRRSGGTMRGEKNYYCRGAAGDHGSCPATPSPLASTLLLPAEAVSTSWSGPGSGLSGGDEEETRLLQLLRTAPDPSEAFQALQAALPRRGGRLGFPRRKEALYRALGRVLVEGGSDEKRLCLQLLSDVLRGQGEAGQLEEAFSLALLPQLVVSLREDNPALRKDALQILHICLRRSSGQVLRTLIQGLESPDARLRASTALLLPVLLTPEDLLLGLDLTEVIISLARKLGDQEMEEESETAFSTLQQIGERLGQERFHSYISRLPSALRRHYNRRLESQYGSQVPYYLELEASGFSEDAAPCVVNLSSSNLKFGIIPQELHARLLDQEDYKNRTQAVEELKQLLGKFNPSSTPHSSLVGFISLLYNLLDDSNFKVVHGTLQVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKEVGPQQVLSLLLENLKHKHSRVREEVVNICICSLLTYPSEDFDLSKLSFDLAPALVDSKRRVRQAALEAFAVLASSLGSGKTNVLFKAVDTVELQDNGDGVMNAVQARLARKTLPRLTEQGFVEYAILMPTSAQGRSSHLAHGADTDWLMSGNRTQSAHCYCGDHTRDSMQLYGSYSPTICTRRVLSAGKGKNKLPWENEQPGVMGENQTSSSKDIKETEQFSAHDLIPSPKLKPSQGVPANDDLCFSKKRSSRNLFQSSRDFNSDSIPTCGAGNTANLQTNLSGKCGQLGLSQIGCKTGSVGSDLQFLGTANGHQDKVYAGLTFGSKTQQTFGSQSERTSSYSASNASPGPFILPSCPLSSPRTSPKHTSPLSVSPKKSQDNAISFSNSWPLKSFEGLSKPSPQKKLVNQKSSDPTGENFQEKTTPVQLTPALVRSPSSRRGLNGSKPVPPIPRGISLLPDKTDLSTVGHIKKQPDDIWKSEKDNLTIDISELNFRDKDLDQEEMQSSLRSLRNSAAKKRAKLSGSSSTSDVDSPDSAMKLELTIDSPSRSSSPNISSYSESGVYSQESLTSSLSTTPQGKRIMSDIFPTFGSKPCSTRLSSAKKISHATEQSSSTGITTSSVSIIGQRMNYGFGCGDFEDDRSHDISPSALKIQNKEHPRHKHIKGFTRSSNLQQISSFDFTSTNTLSEDSVVVVGKGVFGNPNSVPTTCNQPVISSVENEDTFSVKPSIEPPSGVYGRAVQHNTPLYLDVENDKDTKVSIAKSTYDKMRQKRKEEKELFDAKDCERKETNPWERIKHPGTEKMTSENEPSPGIIPQYKERMSSVTHSPEIMDSLELRPFSKPEIALTEALRLLADEDWEKKMEGLNFVRCLAAFHSDLLNTKLHETIFAVVQEVKNLRSGVSRAAVVCLGDLFTYLKKSMDQELDTAVRALLHKAGESNTFIREDVDKALRAMVNNVTPARAVTSLINGGQSHLHIAVRRCTAQHLADVVECMEPERVSCGTKDMADRLLPAAAKFAQDSSQETRYYGRKMLFLMMGHPNFEKLLEKYIPSKDLPYIKESVKNLRQKGLGEIPLDTPSAKGRRSHTGSVGNTRSSSVSRDAFSSSEREVTEVREVPRKSAARNSLESAEYIKAITGLLNAKDFRDRINGIKQLLSDTENNQELVVGNIVKIFDAFKSRLHDSNSKVNLVALETMHKMIPLLRDNLSPIINMLIPAIVDNNLNSKNPGIYAAATNVVHALSQHVDNYLLLQPFCTKAQFLNGKAKQDMTEKLADIVMELYQRKPHATEQKVLVVLWHLLGNMTHSGSLPGAGGNIRTATAKLSKALFAQMGQSLLNQAASQPPHIKKSLEELLDVTVLSEL
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5071096..5071361,5072546..5072632,5073596..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5109497..5109646,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5132511..5134562))
location: region:5071096-5134562:-1
so has part: feature:5132511-5134562:-1:exon
so has part: feature:5122772-5122928:-1:exon
so has part: feature:5121762-5121896:-1:exon
so has part: feature:5119346-5119642:-1:exon
so has part: feature:5117623-5117885:-1:exon
so has part: feature:5116758-5116996:-1:exon
so has part: feature:5114002-5114099:-1:exon
so has part: feature:5109497-5109646:-1:exon
so has part: feature:5108114-5108209:-1:exon
so has part: feature:5102610-5102785:-1:exon
so has part: feature:5099994-5100147:-1:exon
so has part: feature:5097173-5097326:-1:exon
so has part: feature:5093869-5093974:-1:exon
so has part: feature:5093188-5093423:-1:exon
so has part: feature:5090861-5091019:-1:exon
so has part: feature:5086196-5086322:-1:exon
so has part: feature:5084052-5084170:-1:exon
so has part: feature:5080831-5081020:-1:exon
so has part: feature:5073596-5073815:-1:exon
so has part: feature:5072546-5072632:-1:exon
so has part: feature:5071096-5071361:-1:exon

XP_034369798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5132511-5134562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5122772-5122928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5121762-5121896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5119346-5119642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5117623-5117885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5116758-5116996:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5114002-5114099:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5109497-5109646:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5108114-5108209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5102610-5102785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5099994-5100147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5097173-5097326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5093869-5093974:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5093188-5093423:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5090861-5091019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5086196-5086322:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5084052-5084170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5080831-5081020:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5073596-5073815:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5072546-5072632:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5071096-5071361:-1:exon

Togaram1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Togaram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOG array regulator of axonemal microtubules protein 1 isoform X3
translation: MAAAPSELLPLPPLATPGSYRLLSRCRPSAPGTDGRRSGGTMRGEKNYYCRGAAGDHGSCPATPSPLASTLLLPAEAVSTSWSGPGSGLSGGDEEETRLLQLLRTAPDPSEAFQALQAALPRRGGRLGFPRRKEALYRALGRVLVEGGSDEKRLCLQLLSDVLRGQGEAGQLEEAFSLALLPQLVVSLREDNPALRKDALQILHICLRRSSGQVLRTLIQGLESPDARLRASTALLLPVLLTPEDLLLGLDLTEVIISLARKLGDQEMEEESETAFSTLQQIGERLGQERFHSYISRLPSALRRHYNRRLESQYGSQVPYYLELEASGFSEDAAPCVVNLSSSNLKFGIIPQELHARLLDQEDYKNRTQAVEELKQLLGKFNPSSTPHSSLVGFISLLYNLLDDSNFKVVHGTLQVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKEVGPQQVLSLLLENLKHKHSRVREEVVNICICSLLTYPSEDFDLSKLSFDLAPALVDSKRRVRQAALEAFAVLASSLGSGKTNVLFKAVDTVELQDNGDGVMNAVQARLARKTLPRLTEQGFVEYAILMPTSAQGRSSHLAHGADTDWLMSGNRTQSAHCYCGDHTRDSMQLYGSYSPTICTRRVLSAGKGKNKLPWENEQPGVMGENQTSSSKDIKETEQIDPFSGQNKKFSAHDLIPSPKLKPSQGVPANDDLCFSKKRSSRNLFQSSRDFNSDSIPTCGAGNTANLQTNLSGKCGQLGLSQIGCKTGSVGSDLQFLGTANGHQDKVYAGLTFGSKTQQTFGSQSERTSSYSASNASPGPFILPSCPLSSPRTSPKHTSPLSVSPKKSQDNAISFSNSWPLKSFEGLSKPSPQKKLVNQKSSDPTGENFQEKTTPVQLTPALVRSPSSRRGLNGSKPVPPIPRGISLLPDKTDLSTVGHIKKQPDDIWKSEKDNLTIDISELNFRDKDLDQEEMQSSLRSLRNSAAKKRAKLSGSSSTSDVDSPDSAMKLELTIDSPSRSSSPNISSYSESGVYSQESLTSSLSTTPQGKRIMSDIFPTFGSKPCSTRLSSAKKISHATEQSSSTGFTRSSNLQQISSFDFTSTNTLSEDSVVVVGKGVFGNPNSVPTTCNQPVISSVENEDTFSVKPSIEPPSGVYGRAVQHNTPLYLDVENDKDTKVSIAKSTYDKMRQKRKEEKELFDAKDCERKETNPWERIKHPGTEKMTSENEPSPGIIPQYKERMSSVTHSPEIMDSLELRPFSKPEIALTEALRLLADEDWEKKMEGLNFVRCLAAFHSDLLNTKLHETIFAVVQEVKNLRSGVSRAAVVCLGDLFTYLKKSMDQELDTAVRALLHKAGESNTFIREDVDKALRAMVNNVTPARAVTSLINGGQSHLHIAVRRCTAQHLADVVECMEPERVSCGTKDMADRLLPAAAKFAQDSSQETRYYGRKMLFLMMGHPNFEKLLEKYIPSKDLPYIKESVKNLRQKGLGEIPLDTPSAKGRRSHTGSVGNTRSSSVSRDAFSSSEREVTEVREVPRKSAARNSLESAEYIKAITGLLNAKDFRDRINGIKQLLSDTENNQELVVGNIVKIFDAFKSRLHDSNSKVNLVALETMHKMIPLLRDNLSPIINMLIPAIVDNNLNSKNPGIYAAATNVVHALSQHVDNYLLLQPFCTKAQFLNGKAKQDMTEKLADIVMELYQRKPHATEQKVLVVLWHLLGNMTHSGSLPGAGGNIRTATAKLSKALFAQMGQSLLNQAASQPPHIKKSLEELLDVTVLSEL
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5071096..5071361,5072546..5072632,5073596..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5130294..5130323,5132511..5134562))
location: region:5071096-5134562:-1
so has part: feature:5132511-5134562:-1:exon
so has part: feature:5130294-5130323:-1:exon
so has part: feature:5122772-5122928:-1:exon
so has part: feature:5121762-5121896:-1:exon
so has part: feature:5119346-5119642:-1:exon
so has part: feature:5117623-5117885:-1:exon
so has part: feature:5116758-5116996:-1:exon
so has part: feature:5114002-5114099:-1:exon
so has part: feature:5108114-5108209:-1:exon
so has part: feature:5102610-5102785:-1:exon
so has part: feature:5099994-5100147:-1:exon
so has part: feature:5097173-5097326:-1:exon
so has part: feature:5093869-5093974:-1:exon
so has part: feature:5093188-5093423:-1:exon
so has part: feature:5090861-5091019:-1:exon
so has part: feature:5086196-5086322:-1:exon
so has part: feature:5084052-5084170:-1:exon
so has part: feature:5080831-5081020:-1:exon
so has part: feature:5073596-5073815:-1:exon
so has part: feature:5072546-5072632:-1:exon
so has part: feature:5071096-5071361:-1:exon

XP_034369799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5132511-5134562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5130294-5130323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5122772-5122928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5121762-5121896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5119346-5119642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5117623-5117885:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5116758-5116996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5114002-5114099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5108114-5108209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5102610-5102785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5099994-5100147:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5097173-5097326:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5093869-5093974:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5093188-5093423:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5090861-5091019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5086196-5086322:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5084052-5084170:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5080831-5081020:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5073596-5073815:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5072546-5072632:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5071096-5071361:-1:exon

Togaram1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Togaram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOG array regulator of axonemal microtubules protein 1 isoform X1
translation: MAAAPSELLPLPPLATPGSYRLLSRCRPSAPGTDGRRSGGTMRGEKNYYCRGAAGDHGSCPATPSPLASTLLLPAEAVSTSWSGPGSGLSGGDEEETRLLQLLRTAPDPSEAFQALQAALPRRGGRLGFPRRKEALYRALGRVLVEGGSDEKRLCLQLLSDVLRGQGEAGQLEEAFSLALLPQLVVSLREDNPALRKDALQILHICLRRSSGQVLRTLIQGLESPDARLRASTALLLPVLLTPEDLLLGLDLTEVIISLARKLGDQEMEEESETAFSTLQQIGERLGQERFHSYISRLPSALRRHYNRRLESQYGSQVPYYLELEASGFSEDAAPCVVNLSSSNLKFGIIPQELHARLLDQEDYKNRTQAVEELKQLLGKFNPSSTPHSSLVGFISLLYNLLDDSNFKVVHGTLQVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKEVGPQQVLSLLLENLKHKHSRVREEVVNICICSLLTYPSEDFDLSKLSFDLAPALVDSKRRVRQAALEAFAVLASSLGSGKTNVLFKAVDTVELQDNGDGVMNAVQARLARKTLPRLTEQGFVEYAILMPTSAQGRSSHLAHGADTDWLMSGNRTQSAHCYCGDHTRDSMQLYGSYSPTICTRRVLSAGKGKNKLPWENEQPGVMGENQTSSSKDIKETEQIDPFSGQNKKFSAHDLIPSPKLKPSQGVPANDDLCFSKKRSSRNLFQSSRDFNSDSIPTCGAGNTANLQTNLSGKCGQLGLSQIGCKTGSVGSDLQFLGTANGHQDKVYAGLTFGSKTQQTFGSQSERTSSYSASNASPGPFILPSCPLSSPRTSPKHTSPLSVSPKKSQDNAISFSNSWPLKSFEGLSKPSPQKKLVNQKSSDPTGENFQEKTTPVQLTPALVRSPSSRRGLNGSKPVPPIPRGISLLPDKTDLSTVGHIKKQPDDIWKSEKDNLTIDISELNFRDKDLDQEEMQSSLRSLRNSAAKKRAKLSGSSSTSDVDSPDSAMKLELTIDSPSRSSSPNISSYSESGVYSQESLTSSLSTTPQGKRIMSDIFPTFGSKPCSTRLSSAKKISHATEQSSSTGITTSSVSIIGQRMNYGFGCGDFEDDRSHDISPSALKIQNKEHPRHKHIKGFTRSSNLQQISSFDFTSTNTLSEDSVVVVGKGVFGNPNSVPTTCNQPVISSVENEDTFSVKPSIEPPSGVYGRAVQHNTPLYLDVENDKDTKVSIAKSTYDKMRQKRKEEKELFDAKDCERKETNPWERIKHPGTEKMTSENEPSPGIIPQYKERMSSVTHSPEIMDSLELRPFSKPEIALTEALRLLADEDWEKKMEGLNFVRCLAAFHSDLLNTKLHETIFAVVQEVKNLRSGVSRAAVVCLGDLFTYLKKSMDQELDTAVRALLHKAGESNTFIREDVDKALRAMVNNVTPARAVTSLINGGQSHLHIAVRRCTAQHLADVVECMEPERVSCGTKDMADRLLPAAAKFAQDSSQETRYYGRKMLFLMMGHPNFEKLLEKYIPSKDLPYIKESVKNLRQKGLGEIPLDTPSAKGRRSHTGSVGNTRSSSVSRDAFSSSEREVTEVREVPRKSAARNSLESAEYIKAITGLLNAKDFRDRINGIKQLLSDTENNQELVVGNIVKIFDAFKSRLHDSNSKVNLVALETMHKMIPLLRDNLSPIINMLIPAIVDNNLNSKNPGIYAAATNVVHALSQHVDNYLLLQPFCTKAQFLNGKAKQDMTEKLADIVMELYQRKPHATEQKVLVVLWHLLGNMTHSGSLPGAGGNIRTATAKLSKALFAQMGQSLLNQAASQPPHIKKSLEELLDVTVLSEL
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5071096..5071361,5072546..5072632,5073596..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5109497..5109646,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5130294..5130323,5132511..5134562))
location: region:5071096-5134562:-1
so has part: feature:5132511-5134562:-1:exon
so has part: feature:5130294-5130323:-1:exon
so has part: feature:5122772-5122928:-1:exon
so has part: feature:5121762-5121896:-1:exon
so has part: feature:5119346-5119642:-1:exon
so has part: feature:5117623-5117885:-1:exon
so has part: feature:5116758-5116996:-1:exon
so has part: feature:5114002-5114099:-1:exon
so has part: feature:5109497-5109646:-1:exon
so has part: feature:5108114-5108209:-1:exon
so has part: feature:5102610-5102785:-1:exon
so has part: feature:5099994-5100147:-1:exon
so has part: feature:5097173-5097326:-1:exon
so has part: feature:5093869-5093974:-1:exon
so has part: feature:5093188-5093423:-1:exon
so has part: feature:5090861-5091019:-1:exon
so has part: feature:5086196-5086322:-1:exon
so has part: feature:5084052-5084170:-1:exon
so has part: feature:5080831-5081020:-1:exon
so has part: feature:5073596-5073815:-1:exon
so has part: feature:5072546-5072632:-1:exon
so has part: feature:5071096-5071361:-1:exon

XP_034369797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5132511-5134562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5130294-5130323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5122772-5122928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5121762-5121896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5119346-5119642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5117623-5117885:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5116758-5116996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5114002-5114099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5109497-5109646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5108114-5108209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5102610-5102785:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5099994-5100147:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5097173-5097326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5093869-5093974:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5093188-5093423:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5090861-5091019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5086196-5086322:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5084052-5084170:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5080831-5081020:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5073596-5073815:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5072546-5072632:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5071096-5071361:-1:exon

Togaram1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Togaram1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TOG array regulator of axonemal microtubules protein 1 isoform X5
translation: MAAAPSELLPLPPLATPGSYRLLSRCRPSAPGTDGRRSGGTMRGEKNYYCRGAAGDHGSCPATPSPLASTLLLPAEAVSTSWSGPGSGLSGGDEEETRLLQLLRTAPDPSEAFQALQAALPRRGGRLGFPRRKEALYRALGRVLVEGGSDEKRLCLQLLSDVLRGQGEAGQLEEAFSLALLPQLVVSLREDNPALRKDALQILHICLRRSSGQVLRTLIQGLESPDARLRASTALLLPVLLTPEDLLLGLDLTEVIISLARKLGDQEMEEESETAFSTLQQIGERLGQERFHSYISRLPSALRRHYNRRLESQYGSQVPYYLELEASGFSEDAAPCVVNLSSSNLKFGIIPQELHARLLDQEDYKNRTQAVEELKQLLGKFNPSSTPHSSLVGFISLLYNLLDDSNFKVVHGTLQVLHLLVIRLGEQVQQFLGPVIAASVKVLADNKLVIKQEYMKIFLKLMKEVGPQQVLSLLLENLKHKHSRVREEVVNICICSLLTYPSEDFDLSKLSFDLAPALVDSKRRVRQAALEAFAVLASSLGSGKTNVLFKAVDTVELQDNGDGVMNAVQARLARKTLPRLTEQGFVEYAILMPTSAQGRSSHLAHGADTDWLMSGNRTQSAHCYCGDHTRDSMQLYGSYSPTICTRRVLSAGKGKNKLPWENEQPGVMGENQTSSSKDIKETEQIDPFSGQNKKFSAHDLIPSPKLKPSQGVPANDDLCFSKKRSSRNLFQSSRDFNSDSIPTCGAGNTANLQTNLSGKCGQLGLSQIGCKTGSVGSDLQFLGTANGHQDKVYAGLTFGSKTQQTFGSQSERTSSYSASNASPGPFILPSCPLSSPRTSPKHTSPLSVSPKKSQDNAISFSNSWPLKSFEGLSKPSPQKKLVNQKSSDPTGENFQEKTTPVQLTPALVRSPSSRRGLNGSKPVPPIPRGISLLPDKTDLSTVGHIKKQPDDIWKSEKDNLTIDISELNFRDKDLDQEEMQSSLRSLRNSAAKKRAKLSGSSSTSDVDSPDSAMKLELTIDSPSRSSSPNISSYSESGVYSQESLTSSLSTTPQGKRIMSDIFPTFGSKPCSTRLSSAKKISHATEQSSSTGITTSSVSIIGQRMNYGFGCGDFEDDRSHDISPSALKIQNKEHPRHKHIKGFTRSSNLQQISSFDFTSTNTLSEDSVVVVGKGVFGNPNSVPTTCNQPVISSVENEDTFSVKPSIEPPSGVYGRAVQHNTPLYLDVENDKDTKVSIAKSTYDKMRQKRKEEKELFDAKDCERKETNPWERIKHPGTEKMTSENEPSPGIIPQYKERMSSVTHSPEIMDSLELRPFSKPEIALTEALRLLADEDWEKKMEGLNFVRCLAAFHSDLLNTKLHETIFAVVQEVKNLRSGVSRAAVVCLGDLFTYLKKSMDQELDTAVRALLHKAGESNTFIREDVDKALRAMVNNVTPARAVTSLINGGQSHLHIAVRRCTAQHLADVVECMEPERVSCGTKDMADRLLPAAAKFAQDSSQETRYYGRKMLFLMMGHPNFEKLLEKYIPSKDLPYIKESVKNLRQKGLGEIPLDTPSAKGRRSHTGSVGNTRSSSVSRDAFSSSEREVTEVREVPRKSAARNSLESAEYIKAITGLLNAKDFRDRINGIKQLLSDTENNQELVVGNIVKIFDAFKSRLHDSNSKVNLVALETMHKMIPLLRDNLSPIINMLIPAIVDNNLNSKNPGIYAAATNVVHALSQHTITCFYSHFAQKLSF
SIO_010081: Togaram1
subclass of: SO_0000673
so part of: Togaram1
location: complement(join(5072585..5072632,5073600..5073815,5080831..5081020,5084052..5084170,5086196..5086322,5090861..5091019,5093188..5093423,5093869..5093974,5097173..5097326,5099994..5100147,5102610..5102785,5108114..5108209,5109497..5109646,5114002..5114099,5116758..5116996,5117623..5117885,5119346..5119642,5121762..5121896,5122772..5122928,5130294..5130323,5132511..5134562))
location: region:5072585-5134562:-1
so has part: feature:5132511-5134562:-1:exon
so has part: feature:5130294-5130323:-1:exon
so has part: feature:5122772-5122928:-1:exon
so has part: feature:5121762-5121896:-1:exon
so has part: feature:5119346-5119642:-1:exon
so has part: feature:5117623-5117885:-1:exon
so has part: feature:5116758-5116996:-1:exon
so has part: feature:5114002-5114099:-1:exon
so has part: feature:5109497-5109646:-1:exon
so has part: feature:5108114-5108209:-1:exon
so has part: feature:5102610-5102785:-1:exon
so has part: feature:5099994-5100147:-1:exon
so has part: feature:5097173-5097326:-1:exon
so has part: feature:5093869-5093974:-1:exon
so has part: feature:5093188-5093423:-1:exon
so has part: feature:5090861-5091019:-1:exon
so has part: feature:5086196-5086322:-1:exon
so has part: feature:5084052-5084170:-1:exon
so has part: feature:5080831-5081020:-1:exon
so has part: feature:5073600-5073815:-1:exon
so has part: feature:5072585-5072632:-1:exon

XP_034369802.1
type: Protein
SIO_000068: ncbiprotein

position:5072585:-1
position: 5072585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5132511-5134562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5130294-5130323:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5122772-5122928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5121762-5121896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5119346-5119642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5117623-5117885:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5116758-5116996:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5114002-5114099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5109497-5109646:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5108114-5108209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5102610-5102785:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5099994-5100147:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5097173-5097326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5093869-5093974:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5093188-5093423:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5090861-5091019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5086196-5086322:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5084052-5084170:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5080831-5081020:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5073600-5073815:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5072585-5072632:-1:exon

LOC117717310
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717310
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5074233..5075901
location: region:5074233-5075901:1
so has part: feature:5074233-5075901:1:exon
subclass of: SO_0000010

117717310
type: Gene
SIO_000068: ncbigene

position:5074233:1
position: 5074233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5075901:1
position: 5075901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5074233-5075901:1:exon

LOC117717310
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117717310
product: betaine--homocysteine S-methyltransferase 1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514653.1
SIO_010081: LOC117717310
subclass of: SO_0000673
so part of: LOC117717310
location: join(5074233..5074263,5074633..5075901)
location: region:5074233-5075901:1
so has part: feature:5074233-5074263:1:exon
so has part: feature:5074633-5075901:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5074233-5074263:1:exon

position:5074263:1
position: 5074263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5074633-5075901:1:exon

position:5074633:1
position: 5074633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117717310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117717310
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:5075734..5075736,aa:OTHER)
product: LOW QUALITY PROTEIN: betaine--homocysteine S-methyltransferase 1-like
translation: MECHLLPVNCTPSGPPLCSAPLTVLERWHRLPAKKGILERLNAGEVVIGDGGFVFSLEKRGYVKAGPWTKEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVAEKISGQKVNEAACDIARQVAEEGDALVAGGMSQTPSYLSCKSEMEVKKIFHQQLEVFIKKNVDFLIAEYFEHVEEAVWAVEALKTSVKPVAATMCIGPEGDYLHGVSPGECAVRLVKAGASIVGVNCHFDPSISLQTVKLMKEGLEAALLKAYLMSQPLAYHTPDCGKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYIGGCCGFEPYHIRAIAEELAPERGFLPPASEKHGSWGSGLDMHTKPWIRARARKEYWXNRRIASGRPYNPSMSKPDAWGVTKGTAELMQQKEATSEQQLRELFEKQKFKSAQ
SIO_010081: LOC117717310
subclass of: SO_0000673
so part of: LOC117717310
location: join(5074233..5074263,5074633..5075901)
location: region:5074233-5075901:1
so has part: feature:5074233-5074263:1:exon
so has part: feature:5074633-5075901:1:exon

XP_034370544.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5074233-5074263:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5074633-5075901:1:exon

Klhl28
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Klhl28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5135004..5159776
location: region:5135004-5159776:1
so has part: feature:5135004-5159776:1:exon
subclass of: SO_0000010

117717100
type: Gene
SIO_000068: ncbigene

position:5135004:1
position: 5135004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5159776:1
position: 5159776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5135004-5159776:1:exon

Klhl28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Klhl28
product: kelch like family member 28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 1 long SRA read, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034514334.1
SIO_010081: Klhl28
subclass of: SO_0000673
so part of: Klhl28
location: join(5135004..5135130,5142812..5143710,5150978..5151421,5152570..5152778,5159413..5159776)
location: region:5135004-5159776:1
so has part: feature:5135004-5135130:1:exon
so has part: feature:5142812-5143710:1:exon
so has part: feature:5150978-5151421:1:exon
so has part: feature:5152570-5152778:1:exon
so has part: feature:5159413-5159776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5135004-5135130:1:exon

position:5135130:1
position: 5135130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5142812-5143710:1:exon

position:5142812:1
position: 5142812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5143710:1
position: 5143710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5150978-5151421:1:exon

position:5150978:1
position: 5150978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5151421:1
position: 5151421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5152570-5152778:1:exon

position:5152570:1
position: 5152570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5152778:1
position: 5152778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5159413-5159776:1:exon

position:5159413:1
position: 5159413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Klhl28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Klhl28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 28
translation: MDHTAPTYMLANLTHLHSEQLLQGLNLLRQHHELCDIILRVGDVKIHAHKVVLASISPYFKAMFTGNLSEKENSEVEFQCIDEAALQAIVEYAYTGTVFISQDTVESLLPAANLLQIKLVLKECCAFLESQLDPGNCIGISRFAETYGCHDLYLAATKFICQNFESVCQTEEFFELTHADLDEIVSNDCLNVATEETVFYALESWIKYDVQERQKYLAQLLNSVRLPLLSVKFLTRLYEANHLIRDDRTCKHLLNEALKYHFMPEHRLSHQTVLMTRPRCAPKVLCAVGGKSGLFACLDSVEMYFPQNDSWIGLAPLNIPRYEFGICVLDQKVYVIGGIETSVRPGGPVRKHENSVECWNPDTNTWTSLERMSESRSTLGVVVLAGEVYALGGYDGQSYLQSVEKYIPKIRQWQPVAPMTSTRSCFAAAVLDGMIYAIGGYGPAHMNSVERYDPSKDSWETVASMADKRIHFGVGVMLGFIFVVGGHNGVSHLSSIERYDPHQNQWTVCRPMKEPRTGVGAAVIDNYLYVVGGHSGSSYLNTVQKYDPISDTWLDSAGMIYCRCNFGLTAL
SIO_010081: Klhl28
subclass of: SO_0000673
so part of: Klhl28
location: join(5142812..5143710,5150978..5151421,5152570..5152778,5159413..5159576)
location: region:5142812-5159576:1
so has part: feature:5142812-5143710:1:exon
so has part: feature:5150978-5151421:1:exon
so has part: feature:5152570-5152778:1:exon
so has part: feature:5159413-5159576:1:exon

XP_034370225.1
type: Protein
SIO_000068: ncbiprotein

position:5159576:1
position: 5159576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5142812-5143710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5150978-5151421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5152570-5152778:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5159413-5159576:1:exon

C11H14orf28
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: C11H14orf28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5182426..5189150)
location: region:5182426-5189150:-1
so has part: feature:5182426-5189150:-1:exon
subclass of: SO_0000010

117716752
type: Gene
SIO_000068: ncbigene

position:5182426:-1
position: 5182426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5189150:-1
position: 5189150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5182426-5189150:-1:exon

C11H14orf28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C11H14orf28
product: chromosome 11 C14orf28 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513778.1
SIO_010081: C11H14orf28
subclass of: SO_0000673
so part of: C11H14orf28
location: complement(join(5182426..5182859,5183397..5183531,5184622..5184711,5185708..5186232,5188870..5189150))
location: region:5182426-5189150:-1
so has part: feature:5188870-5189150:-1:exon
so has part: feature:5185708-5186232:-1:exon
so has part: feature:5184622-5184711:-1:exon
so has part: feature:5183397-5183531:-1:exon
so has part: feature:5182426-5182859:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5188870-5189150:-1:exon

position:5188870:-1
position: 5188870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5185708-5186232:-1:exon

position:5185708:-1
position: 5185708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5186232:-1
position: 5186232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5184622-5184711:-1:exon

position:5184622:-1
position: 5184622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5184711:-1
position: 5184711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5183397-5183531:-1:exon

position:5183397:-1
position: 5183397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5183531:-1
position: 5183531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5182426-5182859:-1:exon

position:5182859:-1
position: 5182859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C11H14orf28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C11H14orf28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C14orf28 homolog isoform X1
translation: MKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENENFPRELSLHFGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLVIDLFGNEHDNFTKNLENLMSTIQESYCSNRRCPTRVQEDQQRTISINPPQEIPHGNLIRLAVDELFCSKIELCEERGCGGLREFSQRIFCHGAPPFVVLNMQHWRPEDLAYVPYHLDLSDHKYLLEGATLFNKEEHHYSAAFQIDGHWMHYDGLRNVNLILLNKPPEFLLLSSLVYIRATEK
SIO_010081: C11H14orf28
subclass of: SO_0000673
so part of: C11H14orf28
location: complement(join(5182676..5182859,5183397..5183531,5184622..5184711,5185708..5186231))
location: region:5182676-5186231:-1
so has part: feature:5185708-5186231:-1:exon
so has part: feature:5184622-5184711:-1:exon
so has part: feature:5183397-5183531:-1:exon
so has part: feature:5182676-5182859:-1:exon

XP_034369669.1
type: Protein
SIO_000068: ncbiprotein

position:5182676:-1
position: 5182676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5186231:-1
position: 5186231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5185708-5186231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5184622-5184711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5183397-5183531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5182676-5182859:-1:exon

C11H14orf28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C11H14orf28
product: chromosome 11 C14orf28 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513779.1
SIO_010081: C11H14orf28
subclass of: SO_0000673
so part of: C11H14orf28
location: complement(join(5182750..5182859,5183176..5183248,5183397..5183531,5184622..5184711,5185708..5186232,5188870..5189145))
location: region:5182750-5189145:-1
so has part: feature:5188870-5189145:-1:exon
so has part: feature:5185708-5186232:-1:exon
so has part: feature:5184622-5184711:-1:exon
so has part: feature:5183397-5183531:-1:exon
so has part: feature:5183176-5183248:-1:exon
so has part: feature:5182750-5182859:-1:exon

position:5182750:-1
position: 5182750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5189145:-1
position: 5189145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5188870-5189145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5185708-5186232:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5184622-5184711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5183397-5183531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5183176-5183248:-1:exon

position:5183176:-1
position: 5183176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5183248:-1
position: 5183248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5182750-5182859:-1:exon

C11H14orf28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C11H14orf28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C14orf28 homolog isoform X2
translation: MKTLFEEIKASIKNNYNQDRSFWRPVLPWGGVFTIKAGRKAVSCTPLYVEIRLKNTCTIDGFLMLLYVILNENENFPRELSLHFGREFVDCFLYLMDTYSFTTVKLLWIWDKMEKQQYKSEVHKASLVIDLFGNEHDNFTKNLENLMSTIQESYCSNRRCPTRVQEDQQRTISINPPQEIPHGNLIRLAVDELFCSKIELCEERGCGGLREFSQRIFCHGAPPFVVLNMQHWRPEDLAYVPYHLDLSDHKNRRILVSVRPIHCTRNFWTRQSYAILAGRRHFI
SIO_010081: C11H14orf28
subclass of: SO_0000673
so part of: C11H14orf28
location: complement(join(5182830..5182859,5183176..5183248,5183397..5183531,5184622..5184711,5185708..5186231))
location: region:5182830-5186231:-1
so has part: feature:5185708-5186231:-1:exon
so has part: feature:5184622-5184711:-1:exon
so has part: feature:5183397-5183531:-1:exon
so has part: feature:5183176-5183248:-1:exon
so has part: feature:5182830-5182859:-1:exon

XP_034369670.1
type: Protein
SIO_000068: ncbiprotein

position:5182830:-1
position: 5182830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5185708-5186231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5184622-5184711:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5183397-5183531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5183176-5183248:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5182830-5182859:-1:exon

LOC117717215
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5270064..5271066)
location: region:5270064-5271066:-1
so has part: feature:5270064-5271066:-1:exon
subclass of: SO_0000010

117717215
type: Gene
SIO_000068: ncbigene

position:5270064:-1
position: 5270064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5271066:-1
position: 5271066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5270064-5271066:-1:exon

LOC117717215
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117717215
product: protein dpy-30 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514519.1
SIO_010081: LOC117717215
subclass of: SO_0000673
so part of: LOC117717215
location: complement(join(5270064..5270108,5270791..5271066))
location: region:5270064-5271066:-1
so has part: feature:5270791-5271066:-1:exon
so has part: feature:5270064-5270108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5270791-5271066:-1:exon

position:5270791:-1
position: 5270791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5270064-5270108:-1:exon

position:5270108:-1
position: 5270108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117717215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117717215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein dpy-30 homolog
translation: MESEQMLEGQTQVAENPHSEYGLTDSIERIVENEKINAEKSSIQKVDLQSLPTRAYLDQPVVPILLQDLAVLAKERPPNPIEFLASYLLKNKAQFED
SIO_010081: LOC117717215
subclass of: SO_0000673
so part of: LOC117717215
location: complement(join(5270091..5270108,5270791..5271066))
location: region:5270091-5271066:-1
so has part: feature:5270791-5271066:-1:exon
so has part: feature:5270091-5270108:-1:exon

XP_034370410.1
type: Protein
SIO_000068: ncbiprotein

position:5270091:-1
position: 5270091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5270791-5271066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5270091-5270108:-1:exon

LOC117717327
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717327
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5284883..5295020)
location: region:5284883-5295020:-1
so has part: feature:5284883-5295020:-1:exon

117717327
type: Gene
SIO_000068: ncbigene

position:5284883:-1
position: 5284883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5295020:-1
position: 5295020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5284883-5295020:-1:exon

LOC117717327
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717327
subclass of: SO_0000673
so part of: LOC117717327
location: complement(5284883..5286013)
location: region:5284883-5286013:-1
so has part: feature:5284883-5286013:-1:exon

position:5286013:-1
position: 5286013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5284883-5286013:-1:exon

LOC117717327
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717327
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717327
subclass of: SO_0000673
so part of: LOC117717327
location: complement(5294895..5295020)
location: region:5294895-5295020:-1
so has part: feature:5294895-5295020:-1:exon

position:5294895:-1
position: 5294895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5294895-5295020:-1:exon

LOC117717424
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717424
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5345248..5345372)
location: region:5345248-5345372:-1
so has part: feature:5345248-5345372:-1:exon

117717424
type: Gene
SIO_000068: ncbigene

position:5345248:-1
position: 5345248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5345372:-1
position: 5345372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5345248-5345372:-1:exon

LOC117717424
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717424
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117717424
subclass of: SO_0000673
so part of: LOC117717424
location: complement(5345248..5345372)
location: region:5345248-5345372:-1
so has part: feature:5345248-5345372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5345248-5345372:-1:exon

Fscb
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Fscb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5579365..5593209
location: region:5579365-5593209:1
so has part: feature:5579365-5593209:1:exon
subclass of: SO_0000010

117717273
type: Gene
SIO_000068: ncbigene

position:5579365:1
position: 5579365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5593209:1
position: 5593209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5579365-5593209:1:exon

Fscb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fscb
product: fibrous sheath CABYR binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
transcript id: XM_034514606.1
SIO_010081: Fscb
subclass of: SO_0000673
so part of: Fscb
location: join(5579365..5583004,5592866..5593209)
location: region:5579365-5593209:1
so has part: feature:5579365-5583004:1:exon
so has part: feature:5592866-5593209:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5579365-5583004:1:exon

position:5583004:1
position: 5583004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5592866-5593209:1:exon

position:5592866:1
position: 5592866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fscb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fscb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrous sheath CABYR-binding protein
translation: MEESNEPEQPISLGRQEYRRRRRPSQPMVDKSQQTEVTEKKKGMAAVQPPAPKATHSIGTIPERKDNYSGKEYESFRLSSQLQQTWVKRKPGQEMTDKSLQTDTSVEEKVEVIFIDKTLTLEESTAHVGETAPELPQSIPEVEVQTNRPTSHLIDRSQQTSCIGDWSLICAKEKVDKEQQTYFSELEITITSMPGSSLIKSKEETMPIAQEGSFVELNGSLEIEVLSTEKVPDVVMSFTEGEISGELQALPADEATDKAELVFTEETPIQAPPPAKETSAAETATTTAKEIVDIQALPADELSSMETPVEISPLLVQGALSDEPSDLQYPPKIEVAPSELPAEDLVPLSEEVLEEVQALAIDTVLEDTGRAESTTVEETTGEVQPPLSEETSKEVPSERIVIVIDKEFAIDEVYEEDQPPTFEEDSADKATAEVQPPPAEDASKEVAPSEVLPPPTEQGIVEDMTAEILSPPTEEGPVEVPLPPTEEGPVEVLLPPAEEGPEEVPPLVTEEEPAEVPPPPAEEAPAEVPPPPAEEGPAEVPPPPTEEGPAEVPPLLTEEGPAEVPPLLTEEGPAEVPPPPAEEGPAEVAPPPTEEGPEEVQPRAADEGLPEVQPPTAEEGPEEVQPPAAEEGLPEVQPPAAEEGPVEVLSPPAEEDLAEVPPTPVEEGPAEVQPPLTVEGPEKVLPPETEEAPTDLPPAATEEHPVEVQPPATAEGPAEVQPPLTEEGPAEVAPPAAEEGPAEVQPPAAVEGLAEVPPLPAEEAPAEVSPPPVEEAPAEFPPSPAEEAPAEVPPLLAEEVPVEVTPPPAQGIPEEVTPLATEETLAEVPPPPIEEGPAPAEISSPPAEKDPAEGLPPSTEENPVEVPTEVQLPHAKSPAEVLPLSGESPTEEASAEVQPPSLEKAPLESLSLEVVIPQAEEFPVDDLSIEVQPLPAEKDIAVGVPVEFQALPADEYSAKKDTVEIQPSSFEGAPIEENPVEAQLPAAKADTAVEASAVHPLSLAPTDETPADIQILQLEETLTEVAPVEGQPLPAEEVFPKVVSEEEATVAEVKPPLSEGAPAEEATVEAQLTSIEESPKRASVDIQPPSPETPVEQSPVVEQPLKTDVVPMQELPVEKMSAEDPLLPSEQTPADQDLLKEDQLSQFDKSQSHQGRGNLN
SIO_010081: Fscb
subclass of: SO_0000673
so part of: Fscb
location: join(5579567..5583004,5592866..5592910)
location: region:5579567-5592910:1
so has part: feature:5579567-5583004:1:exon
so has part: feature:5592866-5592910:1:exon

XP_034370497.1
type: Protein
SIO_000068: ncbiprotein

position:5579567:1
position: 5579567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5592910:1
position: 5592910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5579567-5583004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5592866-5592910:1:exon

LOC117717329
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5995509..5997688
location: region:5995509-5997688:1
so has part: feature:5995509-5997688:1:exon

117717329
type: Gene
SIO_000068: ncbigene

position:5995509:1
position: 5995509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5997688:1
position: 5997688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5995509-5997688:1:exon

LOC117717329
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717329
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717329
subclass of: SO_0000673
so part of: LOC117717329
location: 5995509..5995632
location: region:5995509-5995632:1
so has part: feature:5995509-5995632:1:exon

position:5995632:1
position: 5995632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5995509-5995632:1:exon

LOC117717329
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717329
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717329
subclass of: SO_0000673
so part of: LOC117717329
location: 5996141..5996233
location: region:5996141-5996233:1
so has part: feature:5996141-5996233:1:exon

position:5996141:1
position: 5996141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5996233:1
position: 5996233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5996141-5996233:1:exon

LOC117717329
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717329
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717329
subclass of: SO_0000673
so part of: LOC117717329
location: 5996844..5997284
location: region:5996844-5997284:1
so has part: feature:5996844-5997284:1:exon

position:5996844:1
position: 5996844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5997284:1
position: 5997284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5996844-5997284:1:exon

LOC117717329
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717329
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717329
subclass of: SO_0000673
so part of: LOC117717329
location: 5997402..5997688
location: region:5997402-5997688:1
so has part: feature:5997402-5997688:1:exon

position:5997402:1
position: 5997402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5997402-5997688:1:exon

LOC117717446
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717446
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6784975..6785081
location: region:6784975-6785081:1
so has part: feature:6784975-6785081:1:exon
subclass of: SO_0000623

117717446
type: Gene
SIO_000068: ncbigene

position:6784975:1
position: 6784975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6785081:1
position: 6785081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6784975-6785081:1:exon

LOC117717446
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117717446
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607927.1
SIO_010081: LOC117717446
subclass of: SO_0000673
so part of: LOC117717446
location: 6784975..6785081
location: region:6784975-6785081:1
so has part: feature:6784975-6785081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6784975-6785081:1:exon

LOC117717331
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717331
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6800656..6801208)
location: region:6800656-6801208:-1
so has part: feature:6800656-6801208:-1:exon

117717331
type: Gene
SIO_000068: ncbigene

position:6800656:-1
position: 6800656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6801208:-1
position: 6801208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6800656-6801208:-1:exon

LOC117717331
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717331
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117717331
subclass of: SO_0000673
so part of: LOC117717331
location: complement(6800656..6800797)
location: region:6800656-6800797:-1
so has part: feature:6800656-6800797:-1:exon

position:6800797:-1
position: 6800797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6800656-6800797:-1:exon

LOC117717331
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717331
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117717331
subclass of: SO_0000673
so part of: LOC117717331
location: complement(6800952..6801208)
location: region:6800952-6801208:-1
so has part: feature:6800952-6801208:-1:exon

position:6800952:-1
position: 6800952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6800952-6801208:-1:exon

LOC117717332
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717332
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6949469..7009167
location: region:6949469-7009167:1
so has part: feature:6949469-7009167:1:exon

117717332
type: Gene
SIO_000068: ncbigene

position:6949469:1
position: 6949469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7009167:1
position: 7009167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6949469-7009167:1:exon

LOC117717332
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717332
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117717332
subclass of: SO_0000673
so part of: LOC117717332
location: 6949469..6949622
location: region:6949469-6949622:1
so has part: feature:6949469-6949622:1:exon

position:6949622:1
position: 6949622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6949469-6949622:1:exon

LOC117717332
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717332
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117717332
subclass of: SO_0000673
so part of: LOC117717332
location: 7008608..7009167
location: region:7008608-7009167:1
so has part: feature:7008608-7009167:1:exon

position:7008608:1
position: 7008608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7008608-7009167:1:exon

LOC117717297
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717297
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7010194..7010732)
location: region:7010194-7010732:-1
so has part: feature:7010194-7010732:-1:exon
subclass of: SO_0000010

117717297
type: Gene
SIO_000068: ncbigene

position:7010194:-1
position: 7010194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7010732:-1
position: 7010732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7010194-7010732:-1:exon

LOC117717297
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117717297
product: uncharacterized LOC117717297
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein
transcript id: XM_034514634.1
SIO_010081: LOC117717297
subclass of: SO_0000673
so part of: LOC117717297
location: complement(7010194..7010732)
location: region:7010194-7010732:-1
so has part: feature:7010194-7010732:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7010194-7010732:-1:exon

LOC117717297
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117717297
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117717297
translation: MEDATEDPDESSSGTISDTHSTEESSESSNTGEERPRTQKQRLRHPAKGTAHGNLPNIMNTVQSVLEENSEVKKKGRKRTILVFYYRQNGKKKQNQEKKEEQAPERSQNSDSDSALPGTSQDPGPSALSLPKRVRKWFFQ
SIO_010081: LOC117717297
subclass of: SO_0000673
so part of: LOC117717297
location: complement(7010281..7010703)
location: region:7010281-7010703:-1
so has part: feature:7010281-7010703:-1:exon

XP_034370525.1
type: Protein
SIO_000068: ncbiprotein

position:7010281:-1
position: 7010281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7010703:-1
position: 7010703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7010281-7010703:-1:exon

LOC117717333
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717333
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7088928..7089410)
location: region:7088928-7089410:-1
so has part: feature:7088928-7089410:-1:exon

117717333
type: Gene
SIO_000068: ncbigene

position:7088928:-1
position: 7088928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7089410:-1
position: 7089410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7088928-7089410:-1:exon

LOC117717333
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717333
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117717333
subclass of: SO_0000673
so part of: LOC117717333
location: complement(7088928..7089410)
location: region:7088928-7089410:-1
so has part: feature:7088928-7089410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7088928-7089410:-1:exon

LOC117717334
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717334
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7605940..7606866
location: region:7605940-7606866:1
so has part: feature:7605940-7606866:1:exon

117717334
type: Gene
SIO_000068: ncbigene

position:7605940:1
position: 7605940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7606866:1
position: 7606866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7605940-7606866:1:exon

LOC117717334
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717334
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117717334
subclass of: SO_0000673
so part of: LOC117717334
location: 7605940..7606866
location: region:7605940-7606866:1
so has part: feature:7605940-7606866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7605940-7606866:1:exon

Lrfn5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Lrfn5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7637633..7917182)
location: region:7637633-7917182:-1
so has part: feature:7637633-7917182:-1:exon
subclass of: SO_0000010

117717304
type: Gene
SIO_000068: ncbigene

position:7637633:-1
position: 7637633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7917182:-1
position: 7917182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7637633-7917182:-1:exon

Lrfn5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lrfn5
product: leucine rich repeat and fibronectin type III domain containing 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 1 long SRA read, 19 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034514646.1
SIO_010081: Lrfn5
subclass of: SO_0000673
so part of: Lrfn5
location: complement(join(7637633..7638025,7641205..7641248,7647416..7648128,7650617..7652021,7787430..7787604,7915271..7917182))
location: region:7637633-7917182:-1
so has part: feature:7915271-7917182:-1:exon
so has part: feature:7787430-7787604:-1:exon
so has part: feature:7650617-7652021:-1:exon
so has part: feature:7647416-7648128:-1:exon
so has part: feature:7641205-7641248:-1:exon
so has part: feature:7637633-7638025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7915271-7917182:-1:exon

position:7915271:-1
position: 7915271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7787430-7787604:-1:exon

position:7787430:-1
position: 7787430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7787604:-1
position: 7787604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7650617-7652021:-1:exon

position:7650617:-1
position: 7650617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7652021:-1
position: 7652021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7647416-7648128:-1:exon

position:7647416:-1
position: 7647416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7648128:-1
position: 7648128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7641205-7641248:-1:exon

position:7641205:-1
position: 7641205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7641248:-1
position: 7641248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7637633-7638025:-1:exon

position:7638025:-1
position: 7638025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lrfn5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lrfn5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X2
translation: MEKFLFYLFLIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGNPLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIASNPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNATSSNGDTKMSQDKIVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLASGTMYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVASVLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQMQGCSVTLPQSMSKQAMGHEENAQCCKVASDNAIQSSETCSSQDSSTTTSALPPTWTSSAPVSQKQKRKTGTKPSAEPQSEAVTNVDSQNTNRNNSTALQLASCPPDSVTEGPTTQRAHTKPNALLTNVDQNVQETQRLESI
SIO_010081: Lrfn5
subclass of: SO_0000673
so part of: Lrfn5
location: complement(join(7638008..7638025,7641205..7641248,7647416..7648128,7650617..7652001))
location: region:7638008-7652001:-1
so has part: feature:7650617-7652001:-1:exon
so has part: feature:7647416-7648128:-1:exon
so has part: feature:7641205-7641248:-1:exon
so has part: feature:7638008-7638025:-1:exon

XP_034370537.1
type: Protein
SIO_000068: ncbiprotein

position:7638008:-1
position: 7638008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7652001:-1
position: 7652001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7650617-7652001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7647416-7648128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7641205-7641248:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7638008-7638025:-1:exon

Lrfn5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lrfn5
product: leucine rich repeat and fibronectin type III domain containing 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034514643.1
SIO_010081: Lrfn5
subclass of: SO_0000673
so part of: Lrfn5
location: complement(join(7646167..7648128,7650617..7652021,7787430..7787604,7915271..7916942))
location: region:7646167-7916942:-1
so has part: feature:7915271-7916942:-1:exon
so has part: feature:7787430-7787604:-1:exon
so has part: feature:7650617-7652021:-1:exon
so has part: feature:7646167-7648128:-1:exon

position:7646167:-1
position: 7646167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7916942:-1
position: 7916942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7915271-7916942:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7787430-7787604:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7650617-7652021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7646167-7648128:-1:exon

Lrfn5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lrfn5
product: leucine rich repeat and fibronectin type III domain containing 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034514645.1
SIO_010081: Lrfn5
subclass of: SO_0000673
so part of: Lrfn5
location: complement(join(7646167..7648128,7650617..7652021,7787430..7787604,7915271..7915472,7915884..7915904))
location: region:7646167-7915904:-1
so has part: feature:7915884-7915904:-1:exon
so has part: feature:7915271-7915472:-1:exon
so has part: feature:7787430-7787604:-1:exon
so has part: feature:7650617-7652021:-1:exon
so has part: feature:7646167-7648128:-1:exon

position:7915904:-1
position: 7915904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7915884-7915904:-1:exon

position:7915884:-1
position: 7915884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7915271-7915472:-1:exon

position:7915472:-1
position: 7915472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7787430-7787604:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7650617-7652021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7646167-7648128:-1:exon

Lrfn5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lrfn5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
translation: MEKFLFYLFLIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGNPLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIASNPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNATSSNGDTKMSQDKIVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLASGTMYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVASVLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQMQGCSVTLPQSMSKQAMGHEENAQCCKVASDNAIQSSETCSSQDSSTTTSALPPTWTSSAPVSQKQKRKTGTKPSAEPQSEAVTNVDSQNTNRNNSTALQLASCPPDSVTEGPTTQRAHTKPSKFLTVPAEGPKSRHRSSVSGGLKEYFHYGNSQKSWELSFKRSVSMNTMWSRHCISDICYGKVTI
SIO_010081: Lrfn5
subclass of: SO_0000673
so part of: Lrfn5
location: complement(join(7647219..7648128,7650617..7652001))
location: region:7647219-7652001:-1
so has part: feature:7650617-7652001:-1:exon
so has part: feature:7647219-7648128:-1:exon

XP_034370534.1
type: Protein
SIO_000068: ncbiprotein

position:7647219:-1
position: 7647219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7650617-7652001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7647219-7648128:-1:exon

Lrfn5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lrfn5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
translation: MEKFLFYLFLIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGNPLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIASNPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNATSSNGDTKMSQDKIVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLASGTMYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVASVLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQMQGCSVTLPQSMSKQAMGHEENAQCCKVASDNAIQSSETCSSQDSSTTTSALPPTWTSSAPVSQKQKRKTGTKPSAEPQSEAVTNVDSQNTNRNNSTALQLASCPPDSVTEGPTTQRAHTKPSKFLTVPAEGPKSRHRSSVSGGLKEYFHYGNSQKSWELSFKRSVSMNTMWSRHCISDICYGKVTI
SIO_010081: Lrfn5
subclass of: SO_0000673
so part of: Lrfn5
location: complement(join(7647219..7648128,7650617..7652001))
location: region:7647219-7652001:-1
so has part: feature:7650617-7652001:-1:exon
so has part: feature:7647219-7648128:-1:exon

XP_034370536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7650617-7652001:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7647219-7648128:-1:exon

LOC117717276
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8026026..8028473)
location: region:8026026-8028473:-1
so has part: feature:8026026-8028473:-1:exon

117717276
type: Gene
SIO_000068: ncbigene

position:8026026:-1
position: 8026026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8028473:-1
position: 8028473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8026026-8028473:-1:exon

LOC117717276
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717276
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717276
subclass of: SO_0000673
so part of: LOC117717276
location: complement(8026026..8027071)
location: region:8026026-8027071:-1
so has part: feature:8026026-8027071:-1:exon

position:8027071:-1
position: 8027071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8026026-8027071:-1:exon

LOC117717276
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717276
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717276
subclass of: SO_0000673
so part of: LOC117717276
location: complement(8027139..8028166)
location: region:8027139-8028166:-1
so has part: feature:8027139-8028166:-1:exon

position:8027139:-1
position: 8027139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8028166:-1
position: 8028166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8027139-8028166:-1:exon

LOC117717276
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717276
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717276
subclass of: SO_0000673
so part of: LOC117717276
location: complement(8028262..8028473)
location: region:8028262-8028473:-1
so has part: feature:8028262-8028473:-1:exon

position:8028262:-1
position: 8028262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8028262-8028473:-1:exon

LOC117717336
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8121585..8122823
location: region:8121585-8122823:1
so has part: feature:8121585-8122823:1:exon
subclass of: SO_0000010

117717336
type: Gene
SIO_000068: ncbigene

position:8121585:1
position: 8121585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8122823:1
position: 8122823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8121585-8122823:1:exon

LOC117717336
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117717336
product: serine/threonine-protein kinase Sgk1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034514662.1
SIO_010081: LOC117717336
subclass of: SO_0000673
so part of: LOC117717336
location: 8121585..8122823
location: region:8121585-8122823:1
so has part: feature:8121585-8122823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8121585-8122823:1:exon

LOC117717336
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117717336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Sgk1-like
translation: MKQRRMGLNDFIQKIASNTYACKQAEVQSILKMSQPPEPELMNTNPSPPPSPSQQINLGPSFNPHAKSSDFRFLKVIRKGSFGKVLLARHKAEEAFYVVKVLQKKAILKKEEKHIMSEWNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGRELFYHLQREHCFLEPRARFYAAEIASALGYLHSLNIVYRDLKLENILLELQGHIVLTDFGLCKENIEHNGTTSALSGTPEYLAPEVLHQQPYDRTVDWWCLGVVLYEMLYGLPQFYSWNTAEMYDNILNKPLQLKPNITNSARHLLESLLQKDLTKSLGAKDDFMEIKINIFFSLINWGDLINKKITPPFNANVSGSSDLRHFDPEFIEEPVPSSIGRSHDSILVTASVKEAAAEAFLGFSCAPSMDSFLSVLPGWF
SIO_010081: LOC117717336
subclass of: SO_0000673
so part of: LOC117717336
location: 8121588..8122823
location: region:8121588-8122823:1
so has part: feature:8121588-8122823:1:exon

XP_034370553.1
type: Protein
SIO_000068: ncbiprotein

position:8121588:1
position: 8121588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8121588-8122823:1:exon

LOC117717337
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8158211..8279533)
location: region:8158211-8279533:-1
so has part: feature:8158211-8279533:-1:exon

117717337
type: Gene
SIO_000068: ncbigene

position:8158211:-1
position: 8158211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8279533:-1
position: 8279533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8158211-8279533:-1:exon

LOC117717337
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717337
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717337
subclass of: SO_0000673
so part of: LOC117717337
location: complement(8158211..8158274)
location: region:8158211-8158274:-1
so has part: feature:8158211-8158274:-1:exon

position:8158274:-1
position: 8158274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8158211-8158274:-1:exon

LOC117717337
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717337
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717337
subclass of: SO_0000673
so part of: LOC117717337
location: complement(8158364..8158540)
location: region:8158364-8158540:-1
so has part: feature:8158364-8158540:-1:exon

position:8158364:-1
position: 8158364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8158540:-1
position: 8158540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8158364-8158540:-1:exon

LOC117717337
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717337
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717337
subclass of: SO_0000673
so part of: LOC117717337
location: complement(8158717..8159256)
location: region:8158717-8159256:-1
so has part: feature:8158717-8159256:-1:exon

position:8158717:-1
position: 8158717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8159256:-1
position: 8159256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8158717-8159256:-1:exon

LOC117717337
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717337
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717337
subclass of: SO_0000673
so part of: LOC117717337
location: complement(8259323..8259481)
location: region:8259323-8259481:-1
so has part: feature:8259323-8259481:-1:exon

position:8259323:-1
position: 8259323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8259481:-1
position: 8259481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8259323-8259481:-1:exon

LOC117717337
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717337
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717337
subclass of: SO_0000673
so part of: LOC117717337
location: complement(8269920..8270013)
location: region:8269920-8270013:-1
so has part: feature:8269920-8270013:-1:exon

position:8269920:-1
position: 8269920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8270013:-1
position: 8270013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8269920-8270013:-1:exon

LOC117717337
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717337
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717337
subclass of: SO_0000673
so part of: LOC117717337
location: complement(8274432..8274545)
location: region:8274432-8274545:-1
so has part: feature:8274432-8274545:-1:exon

position:8274432:-1
position: 8274432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8274545:-1
position: 8274545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8274432-8274545:-1:exon

LOC117717337
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717337
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 27% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717337
subclass of: SO_0000673
so part of: LOC117717337
location: complement(8279530..8279533)
location: region:8279530-8279533:-1
so has part: feature:8279530-8279533:-1:exon

position:8279530:-1
position: 8279530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8279530-8279533:-1:exon

LOC117717470
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717470
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8571410..8571516)
location: region:8571410-8571516:-1
so has part: feature:8571410-8571516:-1:exon
subclass of: SO_0000623

117717470
type: Gene
SIO_000068: ncbigene

position:8571410:-1
position: 8571410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8571516:-1
position: 8571516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8571410-8571516:-1:exon

LOC117717470
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117717470
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607945.1
SIO_010081: LOC117717470
subclass of: SO_0000673
so part of: LOC117717470
location: complement(8571410..8571516)
location: region:8571410-8571516:-1
so has part: feature:8571410-8571516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8571410-8571516:-1:exon

LOC117717338
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(8851528..8853083)
location: region:8851528-8853083:-1
so has part: feature:8851528-8853083:-1:exon

117717338
type: Gene
SIO_000068: ncbigene

position:8851528:-1
position: 8851528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8853083:-1
position: 8853083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8851528-8853083:-1:exon

LOC117717338
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717338
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC117717338
subclass of: SO_0000673
so part of: LOC117717338
location: complement(8851528..8853083)
location: region:8851528-8853083:-1
so has part: feature:8851528-8853083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8851528-8853083:-1:exon

LOC117717339
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117717339
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8853264..8900515
location: region:8853264-8900515:1
so has part: feature:8853264-8900515:1:exon

117717339
type: Gene
SIO_000068: ncbigene

position:8853264:1
position: 8853264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8900515:1
position: 8900515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8853264-8900515:1:exon

LOC117717339
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717339
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717339
subclass of: SO_0000673
so part of: LOC117717339
location: 8853264..8853349
location: region:8853264-8853349:1
so has part: feature:8853264-8853349:1:exon

position:8853349:1
position: 8853349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8853264-8853349:1:exon

LOC117717339
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717339
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717339
subclass of: SO_0000673
so part of: LOC117717339
location: 8862547..8863325
location: region:8862547-8863325:1
so has part: feature:8862547-8863325:1:exon

position:8862547:1
position: 8862547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8863325:1
position: 8863325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8862547-8863325:1:exon

LOC117717339
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117717339
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117717339
subclass of: SO_0000673
so part of: LOC117717339
location: 8900309..8900515
location: region:8900309-8900515:1
so has part: feature:8900309-8900515:1:exon

position:8900309:1
position: 8900309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8900309-8900515:1:exon

Fbxo33
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Fbxo33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9935985..9955005
location: region:9935985-9955005:1
so has part: feature:9935985-9955005:1:exon
subclass of: SO_0000010

117717105
type: Gene
SIO_000068: ncbigene

position:9935985:1
position: 9935985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9955005:1
position: 9955005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9935985-9955005:1:exon

Fbxo33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Fbxo33
product: F-box protein 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 9 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034514339.1
SIO_010081: Fbxo33
subclass of: SO_0000673
so part of: Fbxo33
location: join(9935985..9936943,9949399..9949509,9950558..9951243,9952970..9955005)
location: region:9935985-9955005:1
so has part: feature:9935985-9936943:1:exon
so has part: feature:9949399-9949509:1:exon
so has part: feature:9950558-9951243:1:exon
so has part: feature:9952970-9955005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9935985-9936943:1:exon

position:9936943:1
position: 9936943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9949399-9949509:1:exon

position:9949399:1
position: 9949399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9949509:1
position: 9949509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9950558-9951243:1:exon

position:9950558:1
position: 9950558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9951243:1
position: 9951243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9952970-9955005:1:exon

position:9952970:1
position: 9952970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Fbxo33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Fbxo33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 33
translation: MLLFLSVPQPRPPGARTRAGAARVVRWRRRQRQRLRRRQLRRLRGLLRGLRGRPGTGGRRRRSRMALCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGGPGDGGGSGGGTDAGTGGEESEALQLSSRWLEVLRIYLELVLCVLLSIRNNRNLQKFSLFGDISVVQQQGSLCSTYLSRVDPDGKKMKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNSIANTMEHLSLLDNNIPGNSTLITAVELERFVNLRSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHNASVMLKSLDNIPNDEHWKALSRKSSSLRVYLMVFDVKSEDMLKILKPSIPLERVHFDSYVTCVSGAIVDLISRQYDKFLTHFILMNDMIETSGFPDLSDNRNEDPLVLLAWRCTKLTLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELADQDVDPVHNLIEQVSLGLGQPWHAVLDIESLSVFTEPNRHFYREMQSFSEDV
SIO_010081: Fbxo33
subclass of: SO_0000673
so part of: Fbxo33
location: join(9936312..9936943,9949399..9949509,9950558..9951243,9952970..9953241)
location: region:9936312-9953241:1
so has part: feature:9936312-9936943:1:exon
so has part: feature:9949399-9949509:1:exon
so has part: feature:9950558-9951243:1:exon
so has part: feature:9952970-9953241:1:exon

XP_034370230.1
type: Protein
SIO_000068: ncbiprotein

position:9936312:1
position: 9936312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9953241:1
position: 9953241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9936312-9936943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9949399-9949509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9950558-9951243:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9952970-9953241:1:exon

Mia2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mia2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9969024..10071861)
location: region:9969024-10071861:-1
so has part: feature:9969024-10071861:-1:exon
subclass of: SO_0000010

117716832
type: Gene
SIO_000068: ncbigene

position:9969024:-1
position: 9969024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10071861:-1
position: 10071861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9969024-10071861:-1:exon

Mia2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mia2
product: MIA SH3 domain ER export factor 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513922.1
SIO_010081: Mia2
subclass of: SO_0000673
so part of: Mia2
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SIO_000300: 16
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SIO_000300: 19
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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 25
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Mia2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mia2
product: MIA SH3 domain ER export factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513919.1
SIO_010081: Mia2
subclass of: SO_0000673
so part of: Mia2
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SIO_000300: 3
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SIO_000300: 30
SIO_000628: feature:9969246-9969565:-1:exon

Mia2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mia2
product: MIA SH3 domain ER export factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513918.1
SIO_010081: Mia2
subclass of: SO_0000673
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Mia2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mia2
product: MIA SH3 domain ER export factor 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 long SRA read, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513928.1
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Mia2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mia2
product: MIA SH3 domain ER export factor 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513930.1
SIO_010081: Mia2
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Mia2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mia2
product: MIA SH3 domain ER export factor 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513924.1
SIO_010081: Mia2
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Mia2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mia2
product: MIA SH3 domain ER export factor 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513926.1
SIO_010081: Mia2
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