Arvicanthis niloticus isolate mArvNil1 chromosome 10, mArvNil1.pat.X, whole genome shotgun sequence.
type: Entry
definition: Arvicanthis niloticus isolate mArvNil1 chromosome 10, mArvNil1.pat.X, whole genome shotgun sequence.
sequence version: NC_047667.1
sequence date: 2020-05-16
sequence: sequence
division: CON
label: NC_047667.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA632612
dblink: SAMN12611849
keyword: WGS
keyword: RefSeq
source: Arvicanthis niloticus (African grass rat)
organism: Arvicanthis niloticus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Arvicanthis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022260.1.\nAssembly name: mArvNil1.pat.X\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/27. The original whole-genome shotgun project has the\naccession JAAOMG000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JAN-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Freebayes v. 1.3.1;\n gEVAL manual curation v. 2020-01-16; VGP\n trio assembly pipeline v. 1.6\nAssembly Name :: mArvNil1.pat.X\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 60.95x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Arvicanthis niloticus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 82689117
topology: linear
so has quality: SO_0000987
location: 1..82689117
location: region:1-82689117:1
RO_0002162: 61156

NC_047667
type: RefSeq
SIO_000068: refseq

PRJNA632612
type: BioProject
SIO_000068: bioproject

SAMN12611849
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82689117:1
position: 82689117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-82689117:1:source
so part of: sequence
organism: Arvicanthis niloticus
mol type: genomic DNA
isolate: mArvNil1
specimen voucher: T564M
chromosome: 10
sex: male
tissue type: Spleen (genome), brain & testis (transcriptome)
dev stage: adult
country: USA: Santa Barbara
lat lon: 34.41938 N 119.69905 W
collection date: 06-Mar-2019
collected by: Huishi Toh

61156
type: Taxonomy
SIO_000068: taxonomy

LOC117716394
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<112501..113301)
location: region:112501-113301:-1
so has part: feature:112501-113301:-1:exon
subclass of: SO_0000010

117716394
type: Gene
SIO_000068: ncbigene

position:112501:-1
position: 112501
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:113301:-1
position: 113301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112501-113301:-1:exon

LOC117716394
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716394
product: Y-box-binding protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513447.1
SIO_010081: LOC117716394
subclass of: SO_0000673
so part of: LOC117716394
location: complement(<112501..113301)
location: region:112501-113301:-1
so has part: feature:112501-113301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112501-113301:-1:exon

LOC117716394
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716394
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y-box-binding protein 3-like
translation: MPYNLPSLGPGDPSRPPAHVFPALEQPPPLRDPHWPPQERAGPATTATALTTANRHLVAQRELRGGMSKAGKATTEGTTLLQTVDDVPATPLVGSPSGDAAPGPAPASSAPMGSEDSEKKVLATKVLGTVKWFNARNGYRFINQNDTNEDVFVHQPAIKKNNPRKYLCSVGEEEIVEFDVVAGKGGPKATNVTGLDGVPVEESRYAADCHRYGRRRGPHHNAGEIRQMKDGVPEGTQLLVHRNPTYHPRFRRGPAHPHRSPYRSLQV
SIO_010081: LOC117716394
subclass of: SO_0000673
so part of: LOC117716394
location: complement(<112501..113301)
location: region:112501-113301:-1
so has part: feature:112501-113301:-1:exon

XP_034369338.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:112501-113301:-1:exon

LOC117716396
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(867918..873857)
location: region:867918-873857:-1
so has part: feature:867918-873857:-1:exon
subclass of: SO_0000010

117716396
type: Gene
SIO_000068: ncbigene

position:867918:-1
position: 867918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873857:-1
position: 873857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867918-873857:-1:exon

LOC117716396
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716396
product: Y-box-binding protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_034513448.1
SIO_010081: LOC117716396
subclass of: SO_0000673
so part of: LOC117716396
location: complement(join(867918..868015,873218..873857))
location: region:867918-873857:-1
so has part: feature:873218-873857:-1:exon
so has part: feature:867918-868015:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:873218-873857:-1:exon

position:873218:-1
position: 873218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:867918-868015:-1:exon

position:868015:-1
position: 868015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117716396
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y-box-binding protein 3-like
translation: MSKADEATTCGITLPQAADSTPKSPAASSTPQALAPAVPLAGEPRQRHRPGPSPASSAPVGNKDPEKKILATKVLGTVKWFNIRNGYGFINRNDTKEDVFIHQTAIKKNNPRKYLRSVGEGEIVEFDVVVGKGGPKTTNVTGPDGVPVEESCYAVRCRPPNNAGEIRQMKDRVPKKTQLLVHRNPTYLPRFCRRPAHPHTSPYSSLQVVEPATGGCPVVHFENDFPVEKYVVDILVVESKHMSLW
SIO_010081: LOC117716396
subclass of: SO_0000673
so part of: LOC117716396
location: complement(join(867918..868015,873218..873857))
location: region:867918-873857:-1
so has part: feature:873218-873857:-1:exon
so has part: feature:867918-868015:-1:exon

XP_034369339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:873218-873857:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:867918-868015:-1:exon

LOC117716397
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716397
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1032444..1046940)
location: region:1032444-1046940:-1
so has part: feature:1032444-1046940:-1:exon

117716397
type: Gene
SIO_000068: ncbigene

position:1032444:-1
position: 1032444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046940:-1
position: 1046940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032444-1046940:-1:exon

LOC117716397
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716397
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716397
subclass of: SO_0000673
so part of: LOC117716397
location: complement(1032444..1033559)
location: region:1032444-1033559:-1
so has part: feature:1032444-1033559:-1:exon

position:1033559:-1
position: 1033559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032444-1033559:-1:exon

LOC117716397
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716397
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716397
subclass of: SO_0000673
so part of: LOC117716397
location: complement(1034294..1034295)
location: region:1034294-1034295:-1
so has part: feature:1034294-1034295:-1:exon

position:1034294:-1
position: 1034294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034295:-1
position: 1034295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034294-1034295:-1:exon

LOC117716397
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716397
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716397
subclass of: SO_0000673
so part of: LOC117716397
location: complement(1034568..1034688)
location: region:1034568-1034688:-1
so has part: feature:1034568-1034688:-1:exon

position:1034568:-1
position: 1034568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034688:-1
position: 1034688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034568-1034688:-1:exon

LOC117716397
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716397
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716397
subclass of: SO_0000673
so part of: LOC117716397
location: complement(1046913..1046940)
location: region:1046913-1046940:-1
so has part: feature:1046913-1046940:-1:exon

position:1046913:-1
position: 1046913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046913-1046940:-1:exon

LOC117716660
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716660
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1485731..1485862)
location: region:1485731-1485862:-1
so has part: feature:1485731-1485862:-1:exon
subclass of: SO_0000578

117716660
type: Gene
SIO_000068: ncbigene

position:1485731:-1
position: 1485731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485862:-1
position: 1485862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485731-1485862:-1:exon

LOC117716660
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117716660
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607773.1
SIO_010081: LOC117716660
subclass of: SO_0000673
so part of: LOC117716660
location: complement(1485731..1485862)
location: region:1485731-1485862:-1
so has part: feature:1485731-1485862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1485731-1485862:-1:exon

LOC117716657
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716657
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(1899352..1899474)
location: region:1899352-1899474:-1
so has part: feature:1899352-1899474:-1:exon

117716657
type: Gene
SIO_000068: ncbigene

position:1899352:-1
position: 1899352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1899474:-1
position: 1899474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1899352-1899474:-1:exon

LOC117716657
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716657
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117716657
subclass of: SO_0000673
so part of: LOC117716657
location: complement(1899352..1899474)
location: region:1899352-1899474:-1
so has part: feature:1899352-1899474:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1899352-1899474:-1:exon

LOC117716204
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1931932..1932573)
location: region:1931932-1932573:-1
so has part: feature:1931932-1932573:-1:exon

117716204
type: Gene
SIO_000068: ncbigene

position:1931932:-1
position: 1931932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1932573:-1
position: 1932573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1931932-1932573:-1:exon

LOC117716204
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716204
subclass of: SO_0000673
so part of: LOC117716204
location: complement(1931932..1932573)
location: region:1931932-1932573:-1
so has part: feature:1931932-1932573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1931932-1932573:-1:exon

LOC117716398
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716398
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2091345..2101509
location: region:2091345-2101509:1
so has part: feature:2091345-2101509:1:exon

117716398
type: Gene
SIO_000068: ncbigene

position:2091345:1
position: 2091345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101509:1
position: 2101509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2091345-2101509:1:exon

LOC117716398
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716398
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716398
subclass of: SO_0000673
so part of: LOC117716398
location: 2091345..2091376
location: region:2091345-2091376:1
so has part: feature:2091345-2091376:1:exon

position:2091376:1
position: 2091376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2091345-2091376:1:exon

LOC117716398
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716398
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716398
subclass of: SO_0000673
so part of: LOC117716398
location: 2101071..2101509
location: region:2101071-2101509:1
so has part: feature:2101071-2101509:1:exon

position:2101071:1
position: 2101071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2101071-2101509:1:exon

LOC117716399
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716399
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2331328..2334325
location: region:2331328-2334325:1
so has part: feature:2331328-2334325:1:exon

117716399
type: Gene
SIO_000068: ncbigene

position:2331328:1
position: 2331328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334325:1
position: 2334325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2331328-2334325:1:exon

LOC117716399
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716399
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716399
subclass of: SO_0000673
so part of: LOC117716399
location: 2331328..2331387
location: region:2331328-2331387:1
so has part: feature:2331328-2331387:1:exon

position:2331387:1
position: 2331387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2331328-2331387:1:exon

LOC117716399
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716399
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716399
subclass of: SO_0000673
so part of: LOC117716399
location: 2333272..2334325
location: region:2333272-2334325:1
so has part: feature:2333272-2334325:1:exon

position:2333272:1
position: 2333272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2333272-2334325:1:exon

LOC117716290
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716290
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2799552..2801126
location: region:2799552-2801126:1
so has part: feature:2799552-2801126:1:exon

117716290
type: Gene
SIO_000068: ncbigene

position:2799552:1
position: 2799552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2801126:1
position: 2801126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2799552-2801126:1:exon

LOC117716290
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716290
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716290
subclass of: SO_0000673
so part of: LOC117716290
location: 2799552..2801126
location: region:2799552-2801126:1
so has part: feature:2799552-2801126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2799552-2801126:1:exon

LOC117716400
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2989251..2991725
location: region:2989251-2991725:1
so has part: feature:2989251-2991725:1:exon

117716400
type: Gene
SIO_000068: ncbigene

position:2989251:1
position: 2989251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2991725:1
position: 2991725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2989251-2991725:1:exon

LOC117716400
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC117716400
subclass of: SO_0000673
so part of: LOC117716400
location: 2989251..2989462
location: region:2989251-2989462:1
so has part: feature:2989251-2989462:1:exon

position:2989462:1
position: 2989462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2989251-2989462:1:exon

LOC117716400
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC117716400
subclass of: SO_0000673
so part of: LOC117716400
location: 2990402..2991182
location: region:2990402-2991182:1
so has part: feature:2990402-2991182:1:exon

position:2990402:1
position: 2990402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2991182:1
position: 2991182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2990402-2991182:1:exon

LOC117716400
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC117716400
subclass of: SO_0000673
so part of: LOC117716400
location: 2991354..2991725
location: region:2991354-2991725:1
so has part: feature:2991354-2991725:1:exon

position:2991354:1
position: 2991354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2991354-2991725:1:exon

LOC117716401
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716401
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3021006..3068122
location: region:3021006-3068122:1
so has part: feature:3021006-3068122:1:exon
subclass of: SO_0000010

117716401
type: Gene
SIO_000068: ncbigene

position:3021006:1
position: 3021006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3068122:1
position: 3068122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3021006-3068122:1:exon

LOC117716401
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716401
product: Y-box-binding protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513450.1
SIO_010081: LOC117716401
subclass of: SO_0000673
so part of: LOC117716401
location: join(3021006..3021629,3026767..3026828,3068008..3068122)
location: region:3021006-3068122:1
so has part: feature:3021006-3021629:1:exon
so has part: feature:3026767-3026828:1:exon
so has part: feature:3068008-3068122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3021006-3021629:1:exon

position:3021629:1
position: 3021629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3026767-3026828:1:exon

position:3026767:1
position: 3026767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3026828:1
position: 3026828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3068008-3068122:1:exon

position:3068008:1
position: 3068008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716401
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716401
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Y-box-binding protein 3-like
translation: MSEAAEATTCDTTLLQAADPAPKSPAASGTPQAPAPAAPLAGSPGRDTAPGPAPASSAPVGSEDSEKKVLTTKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGEGEIVEFDVVTGKGGPKATNVTGPDGVPVEESRYAVRLRPPHNAGEIRQMKDGVPKGTQLLVHQNPTYHLRFRRGPAHPRMSPYRSLQVFQVILQIVLSEVFDSYSQVGLAAVTTGRKDLVASGSGRAYHAAGCNPGGRPRRAGRAS
SIO_010081: LOC117716401
subclass of: SO_0000673
so part of: LOC117716401
location: join(3021006..3021629,3026767..3026828,3068008..3068122)
location: region:3021006-3068122:1
so has part: feature:3021006-3021629:1:exon
so has part: feature:3026767-3026828:1:exon
so has part: feature:3068008-3068122:1:exon

XP_034369341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3021006-3021629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3026767-3026828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3068008-3068122:1:exon

LOC117716402
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3502125..3507270)
location: region:3502125-3507270:-1
so has part: feature:3502125-3507270:-1:exon

117716402
type: Gene
SIO_000068: ncbigene

position:3502125:-1
position: 3502125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3507270:-1
position: 3507270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3502125-3507270:-1:exon

LOC117716402
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716402
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716402
subclass of: SO_0000673
so part of: LOC117716402
location: complement(3502125..3504479)
location: region:3502125-3504479:-1
so has part: feature:3502125-3504479:-1:exon

position:3504479:-1
position: 3504479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3502125-3504479:-1:exon

LOC117716402
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716402
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716402
subclass of: SO_0000673
so part of: LOC117716402
location: complement(3507247..3507270)
location: region:3507247-3507270:-1
so has part: feature:3507247-3507270:-1:exon

position:3507247:-1
position: 3507247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507247-3507270:-1:exon

LOC117716403
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3519446..3521447)
location: region:3519446-3521447:-1
so has part: feature:3519446-3521447:-1:exon

117716403
type: Gene
SIO_000068: ncbigene

position:3519446:-1
position: 3519446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3521447:-1
position: 3521447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3519446-3521447:-1:exon

LOC117716403
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716403
subclass of: SO_0000673
so part of: LOC117716403
location: complement(3519446..3519709)
location: region:3519446-3519709:-1
so has part: feature:3519446-3519709:-1:exon

position:3519709:-1
position: 3519709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3519446-3519709:-1:exon

LOC117716403
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716403
subclass of: SO_0000673
so part of: LOC117716403
location: complement(3519897..3520016)
location: region:3519897-3520016:-1
so has part: feature:3519897-3520016:-1:exon

position:3519897:-1
position: 3519897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3520016:-1
position: 3520016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3519897-3520016:-1:exon

LOC117716403
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716403
subclass of: SO_0000673
so part of: LOC117716403
location: complement(3521414..3521447)
location: region:3521414-3521447:-1
so has part: feature:3521414-3521447:-1:exon

position:3521414:-1
position: 3521414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3521414-3521447:-1:exon

LOC117716407
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716407
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4683685..4688399)
location: region:4683685-4688399:-1
so has part: feature:4683685-4688399:-1:exon
subclass of: SO_0000010

117716407
type: Gene
SIO_000068: ncbigene

position:4683685:-1
position: 4683685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4688399:-1
position: 4688399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4683685-4688399:-1:exon

LOC117716407
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716407
product: MLV-related proviral Env polyprotein-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_034513456.1
SIO_010081: LOC117716407
subclass of: SO_0000673
so part of: LOC117716407
location: complement(join(4683685..4683812,4685253..4687010,4687147..4687596,4687960..4688291,4688351..4688399))
location: region:4683685-4688399:-1
so has part: feature:4688351-4688399:-1:exon
so has part: feature:4687960-4688291:-1:exon
so has part: feature:4687147-4687596:-1:exon
so has part: feature:4685253-4687010:-1:exon
so has part: feature:4683685-4683812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4688351-4688399:-1:exon

position:4688351:-1
position: 4688351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4687960-4688291:-1:exon

position:4687960:-1
position: 4687960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4688291:-1
position: 4688291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4687147-4687596:-1:exon

position:4687147:-1
position: 4687147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4687596:-1
position: 4687596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4685253-4687010:-1:exon

position:4685253:-1
position: 4685253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4687010:-1
position: 4687010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4683685-4683812:-1:exon

position:4683812:-1
position: 4683812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117716407
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716407
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(4685994..4685996),aa:OTHER)
product: LOW QUALITY PROTEIN: MLV-related proviral Env polyprotein-like
translation: MRLLLLMYTVLSTDREEAIHRPKKVAITHCPGHQKVTDFVAKGNQMADIEAKKAAQGPMILAIKLRLKVPDPIKLPWAKPVPLSEEESLHYLSGLHQWAHLGPEKMMEIVARSQYKIPKLKKLAHKLSSAQVERMNRTIKEALTKLSIETDGSDWTALLPLALFWVRNMPGVLGLTPFEILYGSPPPIYETLESVACSDDGNIPPLPVLARLKAFETVKKEIWRALKNSYAPKEDLVPHQFEVGDAVLVRRHRTGNLEPDWKGLYLVLLTTPTAVKVNPNPHTPQQLIWQIEEPITGTVMNSTQQVAPLGTWWPALYFCLRQINLATRSFPPNLVRSYGFYSCPESDKDTHCGGPQVFFCGKWSCITSNDGNWKWATSSAGDRLTFSFANSGPGPHAIMGLYKDKPCSPTDLDYIKMQFTDKGKATDFSRWYNGVTWGIVFYKSGGGVGSRLLVHLKIESPPAQSIGPNSVLSEQKPPPPAAPVPPPRPTEGNILNSVLTPAISIPSTGQRLLNLIQGAFTILNGSQPTMTKSCWLCLSSGPPYYEGIAMTGTFNNTTSHSACIWNSKSRLTLTEVSGQGVCIGHPPEAYKHLCNQTLKSPKTSVNRFLVLEIDKXWACIYQFQVCSSGLTPCVSTATFDENKDYCVLAQLIPWVYYHPAGTLECEFEIHPRRFSREPVSLTLAVILGLGVATGVGTGAAALIQTPHYFHQLRTAIDIDLRALEQSVTKLEESLASLSEVVLQNRRGLDLLFLREGGLCDSLREECCFYVDHSGVIKDSMSKLRERLDQRQEGREAQQGWFESWFNKSPWLTTLLSSLAGPLVILLLLLTIVPYILNRLVTFVRERINAVQLFVLRHQYRTLGEFGKRQKCMQIRFIRQTECIKSDLRQFLTRILDEIIILQVV
SIO_010081: LOC117716407
subclass of: SO_0000673
so part of: LOC117716407
location: complement(join(4683685..4683812,4685253..4687010,4687147..4687596,4687960..4688291,4688351..4688399))
location: region:4683685-4688399:-1
so has part: feature:4688351-4688399:-1:exon
so has part: feature:4687960-4688291:-1:exon
so has part: feature:4687147-4687596:-1:exon
so has part: feature:4685253-4687010:-1:exon
so has part: feature:4683685-4683812:-1:exon

XP_034369347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4688351-4688399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4687960-4688291:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4687147-4687596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4685253-4687010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4683685-4683812:-1:exon

LOC117716408
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716408
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4688611..4692455)
location: region:4688611-4692455:-1
so has part: feature:4688611-4692455:-1:exon

117716408
type: Gene
SIO_000068: ncbigene

position:4688611:-1
position: 4688611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4692455:-1
position: 4692455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4688611-4692455:-1:exon

LOC117716408
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716408
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117716408
subclass of: SO_0000673
so part of: LOC117716408
location: complement(4688611..4690652)
location: region:4688611-4690652:-1
so has part: feature:4688611-4690652:-1:exon

position:4690652:-1
position: 4690652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4688611-4690652:-1:exon

LOC117716408
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716408
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117716408
subclass of: SO_0000673
so part of: LOC117716408
location: complement(4690684..4691304)
location: region:4690684-4691304:-1
so has part: feature:4690684-4691304:-1:exon

position:4690684:-1
position: 4690684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4691304:-1
position: 4691304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4690684-4691304:-1:exon

LOC117716408
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716408
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117716408
subclass of: SO_0000673
so part of: LOC117716408
location: complement(4691633..4692455)
location: region:4691633-4692455:-1
so has part: feature:4691633-4692455:-1:exon

position:4691633:-1
position: 4691633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4691633-4692455:-1:exon

LOC117716689
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716689
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4754509..4754599
location: region:4754509-4754599:1
so has part: feature:4754509-4754599:1:exon

117716689
type: Gene
SIO_000068: ncbigene

position:4754509:1
position: 4754509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4754599:1
position: 4754599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4754509-4754599:1:exon

LOC117716689
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716689
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117716689
subclass of: SO_0000673
so part of: LOC117716689
location: 4754509..4754599
location: region:4754509-4754599:1
so has part: feature:4754509-4754599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4754509-4754599:1:exon

LOC117716409
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5097403..5110596
location: region:5097403-5110596:1
so has part: feature:5097403-5110596:1:exon
subclass of: SO_0000010

117716409
type: Gene
SIO_000068: ncbigene

position:5097403:1
position: 5097403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5110596:1
position: 5110596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5097403-5110596:1:exon

LOC117716409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716409
product: 60S ribosomal protein L21-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513457.1
SIO_010081: LOC117716409
subclass of: SO_0000673
so part of: LOC117716409
location: join(5097403..5097448,5098616..5098625,5098717..5098732,5110177..5110596)
location: region:5097403-5110596:1
so has part: feature:5097403-5097448:1:exon
so has part: feature:5098616-5098625:1:exon
so has part: feature:5098717-5098732:1:exon
so has part: feature:5110177-5110596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5097403-5097448:1:exon

position:5097448:1
position: 5097448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5098616-5098625:1:exon

position:5098616:1
position: 5098616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5098625:1
position: 5098625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5098717-5098732:1:exon

position:5098717:1
position: 5098717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5098732:1
position: 5098732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5110177-5110596:1:exon

position:5110177:1
position: 5110177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L21-like
translation: MTQMALVKLSEPYKESSQGQGFRSVDIVDIKGMGTVQKGMPHKCYHSKTGRIYNVTQHAVGIIINKQVKGKILAKRINVRIEHIKHSKNRDSFLKWVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA
SIO_010081: LOC117716409
subclass of: SO_0000673
so part of: LOC117716409
location: join(5097403..5097448,5098616..5098625,5098717..5098732,5110177..5110551)
location: region:5097403-5110551:1
so has part: feature:5097403-5097448:1:exon
so has part: feature:5098616-5098625:1:exon
so has part: feature:5098717-5098732:1:exon
so has part: feature:5110177-5110551:1:exon

XP_034369348.1
type: Protein
SIO_000068: ncbiprotein

position:5110551:1
position: 5110551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5097403-5097448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5098616-5098625:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5098717-5098732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5110177-5110551:1:exon

LOC117716410
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716410
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5264694..5265399)
location: region:5264694-5265399:-1
so has part: feature:5264694-5265399:-1:exon
subclass of: SO_0000010

117716410
type: Gene
SIO_000068: ncbigene

position:5264694:-1
position: 5264694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5265399:-1
position: 5265399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5264694-5265399:-1:exon

LOC117716410
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716410
product: COMM domain-containing protein 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513459.1
SIO_010081: LOC117716410
subclass of: SO_0000673
so part of: LOC117716410
location: complement(join(5264694..5265137,5265258..5265399))
location: region:5264694-5265399:-1
so has part: feature:5265258-5265399:-1:exon
so has part: feature:5264694-5265137:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5265258-5265399:-1:exon

position:5265258:-1
position: 5265258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5264694-5265137:-1:exon

position:5265137:-1
position: 5265137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117716410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716410
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COMM domain-containing protein 10-like
translation: MAVSVVLILPESPSMKKAVQLINAIDTGRFPRLVSHILQKLHLKAESKKQELHLFLETISFVLEQAVYHNVKPAALQQQLETIHLTQDKAEAFASAWSAMGQETVEKFRQRILGPHKLETVGWQLNLQMAHSAQAKLQSPQALLQLEVSKEDSKNMEKVLMEFNPKELFDFYNKLETIQAQLDSLT
SIO_010081: LOC117716410
subclass of: SO_0000673
so part of: LOC117716410
location: complement(join(5264719..5265137,5265258..5265399))
location: region:5264719-5265399:-1
so has part: feature:5265258-5265399:-1:exon
so has part: feature:5264719-5265137:-1:exon

XP_034369350.1
type: Protein
SIO_000068: ncbiprotein

position:5264719:-1
position: 5264719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5265258-5265399:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5264719-5265137:-1:exon

LOC117716411
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5354299..5356109
location: region:5354299-5356109:1
so has part: feature:5354299-5356109:1:exon

117716411
type: Gene
SIO_000068: ncbigene

position:5354299:1
position: 5354299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5356109:1
position: 5356109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5354299-5356109:1:exon

LOC117716411
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716411
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117716411
subclass of: SO_0000673
so part of: LOC117716411
location: 5354299..5354639
location: region:5354299-5354639:1
so has part: feature:5354299-5354639:1:exon

position:5354639:1
position: 5354639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5354299-5354639:1:exon

LOC117716411
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716411
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC117716411
subclass of: SO_0000673
so part of: LOC117716411
location: 5354938..5356109
location: region:5354938-5356109:1
so has part: feature:5354938-5356109:1:exon

position:5354938:1
position: 5354938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5354938-5356109:1:exon

LOC117716412
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716412
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5420845..5424062
location: region:5420845-5424062:1
so has part: feature:5420845-5424062:1:exon

117716412
type: Gene
SIO_000068: ncbigene

position:5420845:1
position: 5420845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5424062:1
position: 5424062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5420845-5424062:1:exon

LOC117716412
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716412
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716412
subclass of: SO_0000673
so part of: LOC117716412
location: 5420845..5421334
location: region:5420845-5421334:1
so has part: feature:5420845-5421334:1:exon

position:5421334:1
position: 5421334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5420845-5421334:1:exon

LOC117716412
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716412
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 13% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716412
subclass of: SO_0000673
so part of: LOC117716412
location: 5423923..5424062
location: region:5423923-5424062:1
so has part: feature:5423923-5424062:1:exon

position:5423923:1
position: 5423923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5423923-5424062:1:exon

LOC117716416
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5457621..5462169
location: region:5457621-5462169:1
so has part: feature:5457621-5462169:1:exon

117716416
type: Gene
SIO_000068: ncbigene

position:5457621:1
position: 5457621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5462169:1
position: 5462169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5457621-5462169:1:exon

LOC117716416
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716416
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716416
subclass of: SO_0000673
so part of: LOC117716416
location: 5457621..5458806
location: region:5457621-5458806:1
so has part: feature:5457621-5458806:1:exon

position:5458806:1
position: 5458806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5457621-5458806:1:exon

LOC117716416
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716416
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716416
subclass of: SO_0000673
so part of: LOC117716416
location: 5459400..5459416
location: region:5459400-5459416:1
so has part: feature:5459400-5459416:1:exon

position:5459400:1
position: 5459400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5459416:1
position: 5459416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5459400-5459416:1:exon

LOC117716416
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716416
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716416
subclass of: SO_0000673
so part of: LOC117716416
location: 5461779..5462169
location: region:5461779-5462169:1
so has part: feature:5461779-5462169:1:exon

position:5461779:1
position: 5461779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5461779-5462169:1:exon

LOC117716146
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5619711..6451586
location: region:5619711-6451586:1
so has part: feature:5619711-6451586:1:exon
subclass of: SO_0000010

117716146
type: Gene
SIO_000068: ncbigene

position:5619711:1
position: 5619711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6451586:1
position: 6451586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5619711-6451586:1:exon

LOC117716146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716146
product: contactin-associated protein like 5-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513073.1
SIO_010081: LOC117716146
subclass of: SO_0000673
so part of: LOC117716146
location: join(5619711..5619880,5817127..5817231,5832857..5833050,5975499..5975646,6003550..6003753,6010414..6010598,6029449..6029589,6070296..6070560,6092535..6092684,6096515..6096686,6144121..6144227,6181126..6181245,6214253..6214453,6318782..6318938,6334754..6334881,6335053..6335223,6344930..6345148,6349320..6349559,6359477..6359704,6400377..6400507,6406365..6406449,6445107..6445325,6448871..6448942,6451326..6451586)
location: region:5619711-6451586:1
so has part: feature:5619711-5619880:1:exon
so has part: feature:5817127-5817231:1:exon
so has part: feature:5832857-5833050:1:exon
so has part: feature:5975499-5975646:1:exon
so has part: feature:6003550-6003753:1:exon
so has part: feature:6010414-6010598:1:exon
so has part: feature:6029449-6029589:1:exon
so has part: feature:6070296-6070560:1:exon
so has part: feature:6092535-6092684:1:exon
so has part: feature:6096515-6096686:1:exon
so has part: feature:6144121-6144227:1:exon
so has part: feature:6181126-6181245:1:exon
so has part: feature:6214253-6214453:1:exon
so has part: feature:6318782-6318938:1:exon
so has part: feature:6334754-6334881:1:exon
so has part: feature:6335053-6335223:1:exon
so has part: feature:6344930-6345148:1:exon
so has part: feature:6349320-6349559:1:exon
so has part: feature:6359477-6359704:1:exon
so has part: feature:6400377-6400507:1:exon
so has part: feature:6406365-6406449:1:exon
so has part: feature:6445107-6445325:1:exon
so has part: feature:6448871-6448942:1:exon
so has part: feature:6451326-6451586:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5619711-5619880:1:exon

position:5619880:1
position: 5619880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5817127-5817231:1:exon

position:5817127:1
position: 5817127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5817231:1
position: 5817231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5832857-5833050:1:exon

position:5832857:1
position: 5832857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5833050:1
position: 5833050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5975499-5975646:1:exon

position:5975499:1
position: 5975499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5975646:1
position: 5975646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6003550-6003753:1:exon

position:6003550:1
position: 6003550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6003753:1
position: 6003753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6010414-6010598:1:exon

position:6010414:1
position: 6010414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6010598:1
position: 6010598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6029449-6029589:1:exon

position:6029449:1
position: 6029449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6029589:1
position: 6029589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6070296-6070560:1:exon

position:6070296:1
position: 6070296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6070560:1
position: 6070560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6092535-6092684:1:exon

position:6092535:1
position: 6092535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6092684:1
position: 6092684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6096515-6096686:1:exon

position:6096515:1
position: 6096515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6096686:1
position: 6096686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6144121-6144227:1:exon

position:6144121:1
position: 6144121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6144227:1
position: 6144227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6181126-6181245:1:exon

position:6181126:1
position: 6181126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6181245:1
position: 6181245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6214253-6214453:1:exon

position:6214253:1
position: 6214253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6214453:1
position: 6214453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6318782-6318938:1:exon

position:6318782:1
position: 6318782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6318938:1
position: 6318938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6334754-6334881:1:exon

position:6334754:1
position: 6334754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6334881:1
position: 6334881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6335053-6335223:1:exon

position:6335053:1
position: 6335053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6335223:1
position: 6335223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6344930-6345148:1:exon

position:6344930:1
position: 6344930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6345148:1
position: 6345148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6349320-6349559:1:exon

position:6349320:1
position: 6349320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6349559:1
position: 6349559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6359477-6359704:1:exon

position:6359477:1
position: 6359477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6359704:1
position: 6359704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6400377-6400507:1:exon

position:6400377:1
position: 6400377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6400507:1
position: 6400507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6406365-6406449:1:exon

position:6406365:1
position: 6406365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6406449:1
position: 6406449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6445107-6445325:1:exon

position:6445107:1
position: 6445107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6445325:1
position: 6445325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6448871-6448942:1:exon

position:6448871:1
position: 6448871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6448942:1
position: 6448942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6451326-6451586:1:exon

position:6451326:1
position: 6451326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716146
product: contactin-associated protein like 5-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513074.1
SIO_010081: LOC117716146
subclass of: SO_0000673
so part of: LOC117716146
location: join(5619711..5619880,5817127..5817231,5832857..5833050,5975499..5975646,6003550..6003753,6010414..6010598,6029449..6029592,6070296..6070560,6092535..6092684,6096515..6096686,6144121..6144227,6181126..6181245,6214253..6214453,6318782..6318938,6334754..6334881,6335053..6335223,6344930..6345148,6349320..6349559,6359477..6359704,6400377..6400507,6406365..6406449,6445107..6445325,6448871..6448942,6451326..6451519)
location: region:5619711-6451519:1
so has part: feature:5619711-5619880:1:exon
so has part: feature:5817127-5817231:1:exon
so has part: feature:5832857-5833050:1:exon
so has part: feature:5975499-5975646:1:exon
so has part: feature:6003550-6003753:1:exon
so has part: feature:6010414-6010598:1:exon
so has part: feature:6029449-6029592:1:exon
so has part: feature:6070296-6070560:1:exon
so has part: feature:6092535-6092684:1:exon
so has part: feature:6096515-6096686:1:exon
so has part: feature:6144121-6144227:1:exon
so has part: feature:6181126-6181245:1:exon
so has part: feature:6214253-6214453:1:exon
so has part: feature:6318782-6318938:1:exon
so has part: feature:6334754-6334881:1:exon
so has part: feature:6335053-6335223:1:exon
so has part: feature:6344930-6345148:1:exon
so has part: feature:6349320-6349559:1:exon
so has part: feature:6359477-6359704:1:exon
so has part: feature:6400377-6400507:1:exon
so has part: feature:6406365-6406449:1:exon
so has part: feature:6445107-6445325:1:exon
so has part: feature:6448871-6448942:1:exon
so has part: feature:6451326-6451519:1:exon

position:6451519:1
position: 6451519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5619711-5619880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5817127-5817231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5832857-5833050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5975499-5975646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003550-6003753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6010414-6010598:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6029449-6029592:1:exon

position:6029592:1
position: 6029592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6070296-6070560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6092535-6092684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6096515-6096686:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6144121-6144227:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6181126-6181245:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6214253-6214453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6318782-6318938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6334754-6334881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6335053-6335223:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6344930-6345148:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6349320-6349559:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6359477-6359704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6400377-6400507:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6406365-6406449:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6445107-6445325:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6448871-6448942:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6451326-6451519:1:exon

LOC117716146
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716146
product: contactin-associated protein like 5-1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513075.1
SIO_010081: LOC117716146
subclass of: SO_0000673
so part of: LOC117716146
location: join(5619711..5619880,5817127..5817231,5832857..5833050,5975499..5975646,6003550..6003753,6010414..6010598,6029449..6029589,6070296..6070560,6092535..6092684,6096515..6096686,6144121..6144227,6181126..6181245,6214253..6214453,6318782..6318889,6332156..6332165,6334754..6334881,6335053..6335223,6344930..6345148,6349320..6349559,6359477..6359704,6400377..6400507,6406365..6406449,6445107..6445325,6448871..6448942,6451326..6451519)
location: region:5619711-6451519:1
so has part: feature:5619711-5619880:1:exon
so has part: feature:5817127-5817231:1:exon
so has part: feature:5832857-5833050:1:exon
so has part: feature:5975499-5975646:1:exon
so has part: feature:6003550-6003753:1:exon
so has part: feature:6010414-6010598:1:exon
so has part: feature:6029449-6029589:1:exon
so has part: feature:6070296-6070560:1:exon
so has part: feature:6092535-6092684:1:exon
so has part: feature:6096515-6096686:1:exon
so has part: feature:6144121-6144227:1:exon
so has part: feature:6181126-6181245:1:exon
so has part: feature:6214253-6214453:1:exon
so has part: feature:6318782-6318889:1:exon
so has part: feature:6332156-6332165:1:exon
so has part: feature:6334754-6334881:1:exon
so has part: feature:6335053-6335223:1:exon
so has part: feature:6344930-6345148:1:exon
so has part: feature:6349320-6349559:1:exon
so has part: feature:6359477-6359704:1:exon
so has part: feature:6400377-6400507:1:exon
so has part: feature:6406365-6406449:1:exon
so has part: feature:6445107-6445325:1:exon
so has part: feature:6448871-6448942:1:exon
so has part: feature:6451326-6451519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5619711-5619880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5817127-5817231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5832857-5833050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5975499-5975646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003550-6003753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6010414-6010598:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6029449-6029589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6070296-6070560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6092535-6092684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6096515-6096686:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6144121-6144227:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6181126-6181245:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6214253-6214453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6318782-6318889:1:exon

position:6318889:1
position: 6318889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6332156-6332165:1:exon

position:6332156:1
position: 6332156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6332165:1
position: 6332165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6334754-6334881:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6335053-6335223:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6344930-6345148:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6349320-6349559:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6359477-6359704:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6400377-6400507:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6406365-6406449:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6445107-6445325:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6448871-6448942:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6451326-6451519:1:exon

LOC117716146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein like 5-1 isoform X2
translation: MDSVPRLNSVLTLILSGLWHLGLTATNYNCDDPLANFLSPMAFSSSSDLTGSSSSAQLNWRMGTGGWSPADSNNQQWLQIDLGNRVEITAIATQGRYGSSDWVTSYRLMFSDTGHNWQQYNQEDSIWTFVGNTNADSVVHHKLLHPVRSRFVRFVPLEWNPNGKIGMRVGVYGCSYRSDVADFDGRSSLLYRFNQKTMSTLKDVISLKFKTMQGDGVLFHGEGQRGDHITLELQKGRLALYLNLDDSKARLGSTVPLVILGSLLDDQHWHSVLLERVGKQANFTVDMNTQHFRTKGETDALDIDYEFSFGGIPVPSKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYSVGNVTFSCSEPQIVPITFVNSRSSYLLLPGTPQIDGLSVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKLAGHGTKILTGSGLNDGLWHSVSINARRNRVTLTLDNDATFPAPDTSRIQIYSGKSYFFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHIDLCSIKDRCLPNYCEHGGHCAQTWTTFYCNCSDTGYTGATCHDSIYEQSCEVYRHRGHTAGFFYIDSDGSGPLGPLQVYCNITEDKIWMTVQHNNTELTRVQGSSPEKPYSMSLNYGGSMEQLEALIDGSEHCEQEVIYHCRRSRLLNTPDGTPFTWWIGRSDERHPYWGGSVPGVQQCGCGLEEKCLDNRHFCNCDADTDEWANDTGLFSFKDHLPVTQIIITDTNRSNSEAAWRIGPLRCYGDRHFWNAVSFSTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFLRLEMSSPSEVTFATDVGNGPIELLVQSPYPLNDNQWHYIQAETNLKETSLQVDNLPQSMREASEEGHFRLQLSSQLFVGGTSSRQKGFLGCIRSLHLNGHKIDLEERAKITSGVRPGCPGHCSSYGSNCHNGGKCVEKQSGYSCDCTNSPYEGPFCQKEISALFDSGTSVTYTFQEPYPVTKNTTSLSSSAIYTDTATHKETIMLSFMTAQAPTLLLYLNFSSQNFLAILLSRNGSLQVRYRLSKDESHVFSMSTENLANRRMHQVKITRDGPELSIQMDQQLFSYNFSPEVEFRTLRSLVLGKVTDTLDLDPEVAQANTMGFIGCLSSVQYNHIAPLKAALRHASIAPVTVQKTLTESSCGSMVDSDVNAVTTVYSSSDSFEKTDEREPLTNAVRSDSAVIGGVIAVVTFITLCVIGIMTRFLYQHKQSHRTNQMKKEYPENLDSSFRNEIDLQNTATECKQEYFI
SIO_010081: LOC117716146
subclass of: SO_0000673
so part of: LOC117716146
location: join(5619799..5619880,5817127..5817231,5832857..5833050,5975499..5975646,6003550..6003753,6010414..6010598,6029449..6029592,6070296..6070560,6092535..6092684,6096515..6096686,6144121..6144227,6181126..6181245,6214253..6214453,6318782..6318938,6334754..6334881,6335053..6335223,6344930..6345148,6349320..6349559,6359477..6359704,6400377..6400507,6406365..6406449,6445107..6445325,6448871..6448942,6451326..6451519)
location: region:5619799-6451519:1
so has part: feature:5619799-5619880:1:exon
so has part: feature:5817127-5817231:1:exon
so has part: feature:5832857-5833050:1:exon
so has part: feature:5975499-5975646:1:exon
so has part: feature:6003550-6003753:1:exon
so has part: feature:6010414-6010598:1:exon
so has part: feature:6029449-6029592:1:exon
so has part: feature:6070296-6070560:1:exon
so has part: feature:6092535-6092684:1:exon
so has part: feature:6096515-6096686:1:exon
so has part: feature:6144121-6144227:1:exon
so has part: feature:6181126-6181245:1:exon
so has part: feature:6214253-6214453:1:exon
so has part: feature:6318782-6318938:1:exon
so has part: feature:6334754-6334881:1:exon
so has part: feature:6335053-6335223:1:exon
so has part: feature:6344930-6345148:1:exon
so has part: feature:6349320-6349559:1:exon
so has part: feature:6359477-6359704:1:exon
so has part: feature:6400377-6400507:1:exon
so has part: feature:6406365-6406449:1:exon
so has part: feature:6445107-6445325:1:exon
so has part: feature:6448871-6448942:1:exon
so has part: feature:6451326-6451519:1:exon

XP_034368965.1
type: Protein
SIO_000068: ncbiprotein

position:5619799:1
position: 5619799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5619799-5619880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5817127-5817231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5832857-5833050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5975499-5975646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003550-6003753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6010414-6010598:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6029449-6029592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6070296-6070560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6092535-6092684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6096515-6096686:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6144121-6144227:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6181126-6181245:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6214253-6214453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6318782-6318938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6334754-6334881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6335053-6335223:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6344930-6345148:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6349320-6349559:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6359477-6359704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6400377-6400507:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6406365-6406449:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6445107-6445325:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6448871-6448942:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6451326-6451519:1:exon

LOC117716146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein like 5-1 isoform X1
translation: MDSVPRLNSVLTLILSGLWHLGLTATNYNCDDPLANFLSPMAFSSSSDLTGSSSSAQLNWRMGTGGWSPADSNNQQWLQIDLGNRVEITAIATQGRYGSSDWVTSYRLMFSDTGHNWQQYNQEDSIWTFVGNTNADSVVHHKLLHPVRSRFVRFVPLEWNPNGKIGMRVGVYGCSYRSDVADFDGRSSLLYRFNQKTMSTLKDVISLKFKTMQGDGVLFHGEGQRGDHITLELQKGRLALYLNLDDSKARLGSTVPLVILGSLLDDQHWHSVLLERVGKQANFTVDMNTQHFRTKGETDALDIDYEFSFGGIPVPSKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFVNSRSSYLLLPGTPQIDGLSVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKLAGHGTKILTGSGLNDGLWHSVSINARRNRVTLTLDNDATFPAPDTSRIQIYSGKSYFFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHIDLCSIKDRCLPNYCEHGGHCAQTWTTFYCNCSDTGYTGATCHDSIYEQSCEVYRHRGHTAGFFYIDSDGSGPLGPLQVYCNITEDKIWMTVQHNNTELTRVQGSSPEKPYSMSLNYGGSMEQLEALIDGSEHCEQEVIYHCRRSRLLNTPDGTPFTWWIGRSDERHPYWGGSVPGVQQCGCGLEEKCLDNRHFCNCDADTDEWANDTGLFSFKDHLPVTQIIITDTNRSNSEAAWRIGPLRCYGDRHFWNAVSFSTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFLRLEMSSPSEVTFATDVGNGPIELLVQSPYPLNDNQWHYIQAETNLKETSLQVDNLPQSMREASEEGHFRLQLSSQLFVGGTSSRQKGFLGCIRSLHLNGHKIDLEERAKITSGVRPGCPGHCSSYGSNCHNGGKCVEKQSGYSCDCTNSPYEGPFCQKEISALFDSGTSVTYTFQEPYPVTKNTTSLSSSAIYTDTATHKETIMLSFMTAQAPTLLLYLNFSSQNFLAILLSRNGSLQVRYRLSKDESHVFSMSTENLANRRMHQVKITRDGPELSIQMDQQLFSYNFSPEVEFRTLRSLVLGKVTDTLDLDPEVAQANTMGFIGCLSSVQYNHIAPLKAALRHASIAPVTVQKTLTESSCGSMVDSDVNAVTTVYSSSDSFEKTDEREPLTNAVRSDSAVIGGVIAVVTFITLCVIGIMTRFLYQHKQSHRTNQMKKEYPENLDSSFRNEIDLQNTATECKQEYFI
SIO_010081: LOC117716146
subclass of: SO_0000673
so part of: LOC117716146
location: join(5619799..5619880,5817127..5817231,5832857..5833050,5975499..5975646,6003550..6003753,6010414..6010598,6029449..6029589,6070296..6070560,6092535..6092684,6096515..6096686,6144121..6144227,6181126..6181245,6214253..6214453,6318782..6318938,6334754..6334881,6335053..6335223,6344930..6345148,6349320..6349559,6359477..6359704,6400377..6400507,6406365..6406449,6445107..6445325,6448871..6448942,6451326..6451519)
location: region:5619799-6451519:1
so has part: feature:5619799-5619880:1:exon
so has part: feature:5817127-5817231:1:exon
so has part: feature:5832857-5833050:1:exon
so has part: feature:5975499-5975646:1:exon
so has part: feature:6003550-6003753:1:exon
so has part: feature:6010414-6010598:1:exon
so has part: feature:6029449-6029589:1:exon
so has part: feature:6070296-6070560:1:exon
so has part: feature:6092535-6092684:1:exon
so has part: feature:6096515-6096686:1:exon
so has part: feature:6144121-6144227:1:exon
so has part: feature:6181126-6181245:1:exon
so has part: feature:6214253-6214453:1:exon
so has part: feature:6318782-6318938:1:exon
so has part: feature:6334754-6334881:1:exon
so has part: feature:6335053-6335223:1:exon
so has part: feature:6344930-6345148:1:exon
so has part: feature:6349320-6349559:1:exon
so has part: feature:6359477-6359704:1:exon
so has part: feature:6400377-6400507:1:exon
so has part: feature:6406365-6406449:1:exon
so has part: feature:6445107-6445325:1:exon
so has part: feature:6448871-6448942:1:exon
so has part: feature:6451326-6451519:1:exon

XP_034368964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5619799-5619880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5817127-5817231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5832857-5833050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5975499-5975646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003550-6003753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6010414-6010598:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6029449-6029589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6070296-6070560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6092535-6092684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6096515-6096686:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6144121-6144227:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6181126-6181245:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6214253-6214453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6318782-6318938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6334754-6334881:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6335053-6335223:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6344930-6345148:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6349320-6349559:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6359477-6359704:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6400377-6400507:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6406365-6406449:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6445107-6445325:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6448871-6448942:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6451326-6451519:1:exon

LOC117716146
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716146
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: contactin-associated protein like 5-1 isoform X3
translation: MDSVPRLNSVLTLILSGLWHLGLTATNYNCDDPLANFLSPMAFSSSSDLTGSSSSAQLNWRMGTGGWSPADSNNQQWLQIDLGNRVEITAIATQGRYGSSDWVTSYRLMFSDTGHNWQQYNQEDSIWTFVGNTNADSVVHHKLLHPVRSRFVRFVPLEWNPNGKIGMRVGVYGCSYRSDVADFDGRSSLLYRFNQKTMSTLKDVISLKFKTMQGDGVLFHGEGQRGDHITLELQKGRLALYLNLDDSKARLGSTVPLVILGSLLDDQHWHSVLLERVGKQANFTVDMNTQHFRTKGETDALDIDYEFSFGGIPVPSKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYSGNVTFSCSEPQIVPITFVNSRSSYLLLPGTPQIDGLSVSFQFRTWNEDGLLLSTELSEGSGTLLLILEGGTLRLLIKKLAGHGTKILTGSGLNDGLWHSVSINARRNRVTLTLDNDATFPAPDTSRIQIYSGKSYFFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHIDLCSIKDRCLPNYCEHGGHCAQTWTTFYCNCSDTGYTGATCHDSIYEQSCEVYRHRGHTAGFFYIDSDGSGPLGPLQVYCNITEDKIWMTVQHNNTELTRVQGSSPEKPYSMSLNYGGSMEQLEALIDGSEHCEQEVIYHCRRSRLLNTPDGTPFTWWIGRSDERHPYWGGSVPGVQQCGCGLEEKCIELANDTGLFSFKDHLPVTQIIITDTNRSNSEAAWRIGPLRCYGDRHFWNAVSFSTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFLRLEMSSPSEVTFATDVGNGPIELLVQSPYPLNDNQWHYIQAETNLKETSLQVDNLPQSMREASEEGHFRLQLSSQLFVGGTSSRQKGFLGCIRSLHLNGHKIDLEERAKITSGVRPGCPGHCSSYGSNCHNGGKCVEKQSGYSCDCTNSPYEGPFCQKEISALFDSGTSVTYTFQEPYPVTKNTTSLSSSAIYTDTATHKETIMLSFMTAQAPTLLLYLNFSSQNFLAILLSRNGSLQVRYRLSKDESHVFSMSTENLANRRMHQVKITRDGPELSIQMDQQLFSYNFSPEVEFRTLRSLVLGKVTDTLDLDPEVAQANTMGFIGCLSSVQYNHIAPLKAALRHASIAPVTVQKTLTESSCGSMVDSDVNAVTTVYSSSDSFEKTDEREPLTNAVRSDSAVIGGVIAVVTFITLCVIGIMTRFLYQHKQSHRTNQMKKEYPENLDSSFRNEIDLQNTATECKQEYFI
SIO_010081: LOC117716146
subclass of: SO_0000673
so part of: LOC117716146
location: join(5619799..5619880,5817127..5817231,5832857..5833050,5975499..5975646,6003550..6003753,6010414..6010598,6029449..6029589,6070296..6070560,6092535..6092684,6096515..6096686,6144121..6144227,6181126..6181245,6214253..6214453,6318782..6318889,6332156..6332165,6334754..6334881,6335053..6335223,6344930..6345148,6349320..6349559,6359477..6359704,6400377..6400507,6406365..6406449,6445107..6445325,6448871..6448942,6451326..6451519)
location: region:5619799-6451519:1
so has part: feature:5619799-5619880:1:exon
so has part: feature:5817127-5817231:1:exon
so has part: feature:5832857-5833050:1:exon
so has part: feature:5975499-5975646:1:exon
so has part: feature:6003550-6003753:1:exon
so has part: feature:6010414-6010598:1:exon
so has part: feature:6029449-6029589:1:exon
so has part: feature:6070296-6070560:1:exon
so has part: feature:6092535-6092684:1:exon
so has part: feature:6096515-6096686:1:exon
so has part: feature:6144121-6144227:1:exon
so has part: feature:6181126-6181245:1:exon
so has part: feature:6214253-6214453:1:exon
so has part: feature:6318782-6318889:1:exon
so has part: feature:6332156-6332165:1:exon
so has part: feature:6334754-6334881:1:exon
so has part: feature:6335053-6335223:1:exon
so has part: feature:6344930-6345148:1:exon
so has part: feature:6349320-6349559:1:exon
so has part: feature:6359477-6359704:1:exon
so has part: feature:6400377-6400507:1:exon
so has part: feature:6406365-6406449:1:exon
so has part: feature:6445107-6445325:1:exon
so has part: feature:6448871-6448942:1:exon
so has part: feature:6451326-6451519:1:exon

XP_034368966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5619799-5619880:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5817127-5817231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5832857-5833050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5975499-5975646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6003550-6003753:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6010414-6010598:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6029449-6029589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6070296-6070560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6092535-6092684:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6096515-6096686:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6144121-6144227:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6181126-6181245:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6214253-6214453:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6318782-6318889:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6332156-6332165:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6334754-6334881:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6335053-6335223:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6344930-6345148:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6349320-6349559:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6359477-6359704:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6400377-6400507:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6406365-6406449:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6445107-6445325:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6448871-6448942:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6451326-6451519:1:exon

LOC117716666
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716666
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5786709..5786786)
location: region:5786709-5786786:-1
so has part: feature:5786709-5786786:-1:exon

117716666
type: Gene
SIO_000068: ncbigene

position:5786709:-1
position: 5786709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5786786:-1
position: 5786786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5786709-5786786:-1:exon

LOC117716666
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716666
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117716666
subclass of: SO_0000673
so part of: LOC117716666
location: complement(5786709..5786786)
location: region:5786709-5786786:-1
so has part: feature:5786709-5786786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5786709-5786786:-1:exon

LOC117716669
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716669
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(6179157..6179252)
location: region:6179157-6179252:-1
so has part: feature:6179157-6179252:-1:exon

117716669
type: Gene
SIO_000068: ncbigene

position:6179157:-1
position: 6179157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6179252:-1
position: 6179252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6179157-6179252:-1:exon

LOC117716669
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716669
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117716669
subclass of: SO_0000673
so part of: LOC117716669
location: complement(6179157..6179252)
location: region:6179157-6179252:-1
so has part: feature:6179157-6179252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6179157-6179252:-1:exon

LOC117716101
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6291302..6295007
location: region:6291302-6295007:1
so has part: feature:6291302-6295007:1:exon

117716101
type: Gene
SIO_000068: ncbigene

position:6291302:1
position: 6291302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6295007:1
position: 6295007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6291302-6295007:1:exon

LOC117716101
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716101
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC117716101
subclass of: SO_0000673
so part of: LOC117716101
location: 6291302..6291557
location: region:6291302-6291557:1
so has part: feature:6291302-6291557:1:exon

position:6291557:1
position: 6291557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6291302-6291557:1:exon

LOC117716101
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716101
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
pseudo: true
SIO_010081: LOC117716101
subclass of: SO_0000673
so part of: LOC117716101
location: 6292561..6295007
location: region:6292561-6295007:1
so has part: feature:6292561-6295007:1:exon

position:6292561:1
position: 6292561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6292561-6295007:1:exon

LOC117716417
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716417
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6586867..6642194
location: region:6586867-6642194:1
so has part: feature:6586867-6642194:1:exon
subclass of: SO_0000010

117716417
type: Gene
SIO_000068: ncbigene

position:6586867:1
position: 6586867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6642194:1
position: 6642194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6586867-6642194:1:exon

LOC117716417
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716417
product: zinc finger protein 813-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034513465.1
SIO_010081: LOC117716417
subclass of: SO_0000673
so part of: LOC117716417
location: join(6586867..6586978,6611983..6612112,6641909..6642194)
location: region:6586867-6642194:1
so has part: feature:6586867-6586978:1:exon
so has part: feature:6611983-6612112:1:exon
so has part: feature:6641909-6642194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6586867-6586978:1:exon

position:6586978:1
position: 6586978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6611983-6612112:1:exon

position:6611983:1
position: 6611983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6612112:1
position: 6612112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6641909-6642194:1:exon

position:6641909:1
position: 6641909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716417
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716417
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 813-like
translation: MDVAIEFSKEEWECLDSAQKALYRDVMLENYSNLVFVGEKPYKCNECGKFFTKSSHLKVYHRVHTGKKLYKCSESGKSITKIHTGMKLYKCKECGKSFTQSLNLQVYYRIHNGEKTCKCNECGKHYKENSKLKVHQRMHTEEKPYKCKECSRSFTQYSKLQVHYRFPIEKKALQI
SIO_010081: LOC117716417
subclass of: SO_0000673
so part of: LOC117716417
location: join(6586867..6586978,6611983..6612112,6641909..6642194)
location: region:6586867-6642194:1
so has part: feature:6586867-6586978:1:exon
so has part: feature:6611983-6612112:1:exon
so has part: feature:6641909-6642194:1:exon

XP_034369356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6586867-6586978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6611983-6612112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6641909-6642194:1:exon

LOC117716418
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716418
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6840430..6841303
location: region:6840430-6841303:1
so has part: feature:6840430-6841303:1:exon

117716418
type: Gene
SIO_000068: ncbigene

position:6840430:1
position: 6840430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6841303:1
position: 6841303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6840430-6841303:1:exon

LOC117716418
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716418
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716418
subclass of: SO_0000673
so part of: LOC117716418
location: 6840430..6841303
location: region:6840430-6841303:1
so has part: feature:6840430-6841303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6840430-6841303:1:exon

LOC117716419
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716419
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7073378..7078428
location: region:7073378-7078428:1
so has part: feature:7073378-7078428:1:exon

117716419
type: Gene
SIO_000068: ncbigene

position:7073378:1
position: 7073378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7078428:1
position: 7078428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7073378-7078428:1:exon

LOC117716419
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716419
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716419
subclass of: SO_0000673
so part of: LOC117716419
location: 7073378..7073384
location: region:7073378-7073384:1
so has part: feature:7073378-7073384:1:exon

position:7073384:1
position: 7073384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7073378-7073384:1:exon

LOC117716419
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716419
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716419
subclass of: SO_0000673
so part of: LOC117716419
location: 7077451..7077553
location: region:7077451-7077553:1
so has part: feature:7077451-7077553:1:exon

position:7077451:1
position: 7077451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7077553:1
position: 7077553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7077451-7077553:1:exon

LOC117716419
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716419
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716419
subclass of: SO_0000673
so part of: LOC117716419
location: 7077772..7078428
location: region:7077772-7078428:1
so has part: feature:7077772-7078428:1:exon

position:7077772:1
position: 7077772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7077772-7078428:1:exon

LOC117716420
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7383040..7449118)
location: region:7383040-7449118:-1
so has part: feature:7383040-7449118:-1:exon

117716420
type: Gene
SIO_000068: ncbigene

position:7383040:-1
position: 7383040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7449118:-1
position: 7449118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7383040-7449118:-1:exon

LOC117716420
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716420
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117716420
subclass of: SO_0000673
so part of: LOC117716420
location: complement(7383040..7384026)
location: region:7383040-7384026:-1
so has part: feature:7383040-7384026:-1:exon

position:7384026:-1
position: 7384026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7383040-7384026:-1:exon

LOC117716420
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716420
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117716420
subclass of: SO_0000673
so part of: LOC117716420
location: complement(7435930..7437158)
location: region:7435930-7437158:-1
so has part: feature:7435930-7437158:-1:exon

position:7435930:-1
position: 7435930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7437158:-1
position: 7437158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7435930-7437158:-1:exon

LOC117716420
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716420
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC117716420
subclass of: SO_0000673
so part of: LOC117716420
location: complement(7448995..7449118)
location: region:7448995-7449118:-1
so has part: feature:7448995-7449118:-1:exon

position:7448995:-1
position: 7448995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7448995-7449118:-1:exon

LOC117716422
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7493231..7496026)
location: region:7493231-7496026:-1
so has part: feature:7493231-7496026:-1:exon
subclass of: SO_0000010

117716422
type: Gene
SIO_000068: ncbigene

position:7493231:-1
position: 7493231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7496026:-1
position: 7496026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7493231-7496026:-1:exon

LOC117716422
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716422
product: zinc finger protein 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_034513466.1
SIO_010081: LOC117716422
subclass of: SO_0000673
so part of: LOC117716422
location: complement(join(7493231..7493533,7493603..7493823,7496017..7496026))
location: region:7493231-7496026:-1
so has part: feature:7496017-7496026:-1:exon
so has part: feature:7493603-7493823:-1:exon
so has part: feature:7493231-7493533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7496017-7496026:-1:exon

position:7496017:-1
position: 7496017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7493603-7493823:-1:exon

position:7493603:-1
position: 7493603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7493823:-1
position: 7493823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7493231-7493533:-1:exon

position:7493533:-1
position: 7493533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117716422
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 2 homolog
translation: MDADQETSDTPPERTRSSNLKAHYRISTQETPYECNVCGKLFLQFSRLKVHHRIHTKDKPYKRNECGKSFSQSSELKSSGLKVHHRIHTGNKPYKCNECGKSFTQSSDLNVHHRIYTGDKAYKCSKCGKCFIQSSDLKAHHRIHTGDKPYKCNECGKSFTWSSSLKVHHRIHTGDKP
SIO_010081: LOC117716422
subclass of: SO_0000673
so part of: LOC117716422
location: complement(join(7493231..7493533,7493603..7493823,7496017..7496026))
location: region:7493231-7496026:-1
so has part: feature:7496017-7496026:-1:exon
so has part: feature:7493603-7493823:-1:exon
so has part: feature:7493231-7493533:-1:exon

XP_034369357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7496017-7496026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7493603-7493823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7493231-7493533:-1:exon

LOC117716424
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7517740..7518921)
location: region:7517740-7518921:-1
so has part: feature:7517740-7518921:-1:exon

117716424
type: Gene
SIO_000068: ncbigene

position:7517740:-1
position: 7517740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7518921:-1
position: 7518921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7517740-7518921:-1:exon

LOC117716424
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716424
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC117716424
subclass of: SO_0000673
so part of: LOC117716424
location: complement(7517740..7518921)
location: region:7517740-7518921:-1
so has part: feature:7517740-7518921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7517740-7518921:-1:exon

LOC117716426
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7602478..7629503)
location: region:7602478-7629503:-1
so has part: feature:7602478-7629503:-1:exon
subclass of: SO_0000010

117716426
type: Gene
SIO_000068: ncbigene

position:7602478:-1
position: 7602478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7629503:-1
position: 7629503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7602478-7629503:-1:exon

LOC117716426
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716426
product: zinc finger protein 726-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins
transcript id: XM_034513475.1
SIO_010081: LOC117716426
subclass of: SO_0000673
so part of: LOC117716426
location: complement(join(7602478..7604039,7628017..7628112,7628573..7628699,7629489..7629503))
location: region:7602478-7629503:-1
so has part: feature:7629489-7629503:-1:exon
so has part: feature:7628573-7628699:-1:exon
so has part: feature:7628017-7628112:-1:exon
so has part: feature:7602478-7604039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7629489-7629503:-1:exon

position:7629489:-1
position: 7629489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7628573-7628699:-1:exon

position:7628573:-1
position: 7628573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7628699:-1
position: 7628699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7628017-7628112:-1:exon

position:7628017:-1
position: 7628017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7628112:-1
position: 7628112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7602478-7604039:-1:exon

position:7604039:-1
position: 7604039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117716426
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 726-like
translation: MASSQGQLTFMDVAIKFSKEEWECLDSSQKALYRDVMLENYNNLVSVGVAVSKSEMITCLEANKEPWIVDRNETEGRAPGLSCDHTKNLFTKAFTQDYFSKEITQKFACIELSPLHRNKFWEYRDASEECDICDYGNHLFARKNCFILETDQEVPDTSPERTESSNLKAHYRISTQETPYKCNVCGKLFLQFSRLKVHHRIHTKDKPYKCNECGKSFNQSSKLKVHHRIHTGDNPYKCNECGKSFNQSSKLKVHHRIHIGDKPYKCSECGKCFIHSSSLKIHHRIHTGNKPYKCNECGKSFTQSSTFHVHHRIHTGDKPYKCYECGKSFNKSSNLKVHHRIHIGDKPYECSKCGKCFTQSSNLKAHYRIHTGDTPYKCNECGKCFTHSSCLKVHHRFHTGNKPYKCNECGKCFTHSSNLKAHHRIHTGDRPYKCYECGKSFKESSKLKVHHRIHTGDKPYKCYECGKCFTHSSNLKAHHRIHTGDRPYKCYECGKSFKESSKLKVHHRTHTGDKPYKCYECGKSFKESSKLKVHHRIHTGDKPYKCNECGKSFKESSKLKVHHRIHTGDKPYKCNECGKCFTQSSDLKVHHRIHTGNNP
SIO_010081: LOC117716426
subclass of: SO_0000673
so part of: LOC117716426
location: complement(join(7602478..7604039,7628017..7628112,7628573..7628699,7629489..7629503))
location: region:7602478-7629503:-1
so has part: feature:7629489-7629503:-1:exon
so has part: feature:7628573-7628699:-1:exon
so has part: feature:7628017-7628112:-1:exon
so has part: feature:7602478-7604039:-1:exon

XP_034369366.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7629489-7629503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7628573-7628699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7628017-7628112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7602478-7604039:-1:exon

LOC117716427
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7646972..7755646)
location: region:7646972-7755646:-1
so has part: feature:7646972-7755646:-1:exon

117716427
type: Gene
SIO_000068: ncbigene

position:7646972:-1
position: 7646972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7755646:-1
position: 7755646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7646972-7755646:-1:exon

LOC117716427
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC117716427
subclass of: SO_0000673
so part of: LOC117716427
location: complement(7646972..7646985)
location: region:7646972-7646985:-1
so has part: feature:7646972-7646985:-1:exon

position:7646985:-1
position: 7646985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7646972-7646985:-1:exon

LOC117716427
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC117716427
subclass of: SO_0000673
so part of: LOC117716427
location: complement(7647431..7647862)
location: region:7647431-7647862:-1
so has part: feature:7647431-7647862:-1:exon

position:7647431:-1
position: 7647431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7647862:-1
position: 7647862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7647431-7647862:-1:exon

LOC117716427
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC117716427
subclass of: SO_0000673
so part of: LOC117716427
location: complement(7672179..7672329)
location: region:7672179-7672329:-1
so has part: feature:7672179-7672329:-1:exon

position:7672179:-1
position: 7672179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7672329:-1
position: 7672329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7672179-7672329:-1:exon

LOC117716427
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC117716427
subclass of: SO_0000673
so part of: LOC117716427
location: complement(7672387..7672803)
location: region:7672387-7672803:-1
so has part: feature:7672387-7672803:-1:exon

position:7672387:-1
position: 7672387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7672803:-1
position: 7672803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7672387-7672803:-1:exon

LOC117716427
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC117716427
subclass of: SO_0000673
so part of: LOC117716427
location: complement(7691618..7693007)
location: region:7691618-7693007:-1
so has part: feature:7691618-7693007:-1:exon

position:7691618:-1
position: 7691618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7693007:-1
position: 7693007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7691618-7693007:-1:exon

LOC117716427
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
pseudo: true
SIO_010081: LOC117716427
subclass of: SO_0000673
so part of: LOC117716427
location: complement(7755043..7755646)
location: region:7755043-7755646:-1
so has part: feature:7755043-7755646:-1:exon

position:7755043:-1
position: 7755043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7755043-7755646:-1:exon

LOC117716429
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7816198..7833958
location: region:7816198-7833958:1
so has part: feature:7816198-7833958:1:exon
subclass of: SO_0000010

117716429
type: Gene
SIO_000068: ncbigene

position:7816198:1
position: 7816198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7833958:1
position: 7833958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7816198-7833958:1:exon

LOC117716429
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716429
product: zinc finger protein 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_034513476.1
SIO_010081: LOC117716429
subclass of: SO_0000673
so part of: LOC117716429
location: join(7816198..7816321,7832481..7833958)
location: region:7816198-7833958:1
so has part: feature:7816198-7816321:1:exon
so has part: feature:7832481-7833958:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7816198-7816321:1:exon

position:7816321:1
position: 7816321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7832481-7833958:1:exon

position:7832481:1
position: 7832481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716429
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 2 homolog
translation: MSPMVQPEGLKHICLCKPPDSHESQQQLPETRNQNPENKISSLSCDHTKNLFTKAFTQDYFLKEITQKFACIELSPLHRNKFWEYRDASEECDICDYGNHLFARKNGFIPETDQEVPDTSPERTESSNLKAHYRISTQETPYKCSECGKCFTQSSSLKVHHRIHTGNKPYKCNECGKSFTQSSTFHVHRRIHTGDKPYKCYECGKSFNKSSNLKVHHRIHIGDKPYKCSKCGKCFTQSSNLKAHYRIHTRDTPYKCNECGKCFTHSSCLKVHHRFHTGNKPYKCNECGKCFTDSSNLKAHHRIHTGDRPYKCYECGKSFKESSKLKVHHRIHTGDKPYKCYECGKSFQESSKLKVHHRIHTGDKPYKCNECGKCFTHSSCLKVHHKFHTGSKPYKCNECGKCFTHSSNLKAHHRIHTGDRPYKCYECGKSFKESSKLKVHHRIHTGDKPYKCYECGKSFKESSKLKVHHRIHTGDKPYKCNECGKCFKQSSHLHVHYRIHIGDKTYKCNECGKCFTQSSDLKVHHRIHTGNNP
SIO_010081: LOC117716429
subclass of: SO_0000673
so part of: LOC117716429
location: join(7816198..7816321,7832481..7833958)
location: region:7816198-7833958:1
so has part: feature:7816198-7816321:1:exon
so has part: feature:7832481-7833958:1:exon

XP_034369367.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7816198-7816321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7832481-7833958:1:exon

LOC117716432
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7935759..7936736
location: region:7935759-7936736:1
so has part: feature:7935759-7936736:1:exon
subclass of: SO_0000010

117716432
type: Gene
SIO_000068: ncbigene

position:7935759:1
position: 7935759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7936736:1
position: 7936736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7935759-7936736:1:exon

LOC117716432
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716432
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_034513481.1
SIO_010081: LOC117716432
subclass of: SO_0000673
so part of: LOC117716432
location: join(7935759..7936180,7936601..7936736)
location: region:7935759-7936736:1
so has part: feature:7935759-7936180:1:exon
so has part: feature:7936601-7936736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7935759-7936180:1:exon

position:7936180:1
position: 7936180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7936601-7936736:1:exon

position:7936601:1
position: 7936601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716432
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716432
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MEIICLQKKNCFIPETDQETSDTPPERTQSSNLKAHYRISTQETPYECNVCGILFLQFSRLKVHHRIHTKDNPYKCNKCGKSFTQSSTFHLHHRFHNGNKPYKCNECGKSFIQSSDLKVHQRIHIGDKPYKCSECGKCFIHCQILKFTTKFILETNITNIMNVEFIPFSNVQVHYRIHTRGSQSS
SIO_010081: LOC117716432
subclass of: SO_0000673
so part of: LOC117716432
location: join(7935759..7936180,7936601..7936736)
location: region:7935759-7936736:1
so has part: feature:7935759-7936180:1:exon
so has part: feature:7936601-7936736:1:exon

XP_034369372.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7935759-7936180:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7936601-7936736:1:exon

LOC117716478
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7961741..7962685
location: region:7961741-7962685:1
so has part: feature:7961741-7962685:1:exon

117716478
type: Gene
SIO_000068: ncbigene

position:7961741:1
position: 7961741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7962685:1
position: 7962685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7961741-7962685:1:exon

LOC117716478
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716478
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 55% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716478
subclass of: SO_0000673
so part of: LOC117716478
location: 7961741..7962685
location: region:7961741-7962685:1
so has part: feature:7961741-7962685:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7961741-7962685:1:exon

Tsn
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tsn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8027247..8040671)
location: region:8027247-8040671:-1
so has part: feature:8027247-8040671:-1:exon
subclass of: SO_0000010

117716284
type: Gene
SIO_000068: ncbigene

position:8027247:-1
position: 8027247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8040671:-1
position: 8040671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8027247-8040671:-1:exon

Tsn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tsn
product: translin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 mRNAs, 7 long SRA reads, 9 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513298.1
SIO_010081: Tsn
subclass of: SO_0000673
so part of: Tsn
location: complement(join(8027247..8029860,8032865..8032944,8033423..8033538,8037874..8037970,8038846..8038939,8040161..8040671))
location: region:8027247-8040671:-1
so has part: feature:8040161-8040671:-1:exon
so has part: feature:8038846-8038939:-1:exon
so has part: feature:8037874-8037970:-1:exon
so has part: feature:8033423-8033538:-1:exon
so has part: feature:8032865-8032944:-1:exon
so has part: feature:8027247-8029860:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8040161-8040671:-1:exon

position:8040161:-1
position: 8040161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8038846-8038939:-1:exon

position:8038846:-1
position: 8038846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8038939:-1
position: 8038939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8037874-8037970:-1:exon

position:8037874:-1
position: 8037874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8037970:-1
position: 8037970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8033423-8033538:-1:exon

position:8033423:-1
position: 8033423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8033538:-1
position: 8033538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8032865-8032944:-1:exon

position:8032865:-1
position: 8032865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8032944:-1
position: 8032944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8027247-8029860:-1:exon

position:8029860:-1
position: 8029860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tsn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tsn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin isoform X1
translation: MSVSEIFVELQGFLAAEQDIREEIRKVVQCLEQTAREILTLLQGVHQGTGFQDIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKDTAAACGEK
SIO_010081: Tsn
subclass of: SO_0000673
so part of: Tsn
location: complement(join(8029627..8029860,8032865..8032944,8033423..8033538,8037874..8037970,8038846..8038939,8040161..8040226))
location: region:8029627-8040226:-1
so has part: feature:8040161-8040226:-1:exon
so has part: feature:8038846-8038939:-1:exon
so has part: feature:8037874-8037970:-1:exon
so has part: feature:8033423-8033538:-1:exon
so has part: feature:8032865-8032944:-1:exon
so has part: feature:8029627-8029860:-1:exon

XP_034369189.1
type: Protein
SIO_000068: ncbiprotein

position:8029627:-1
position: 8029627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8040226:-1
position: 8040226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8040161-8040226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8038846-8038939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8037874-8037970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8033423-8033538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8032865-8032944:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8029627-8029860:-1:exon

Tsn
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tsn
product: translin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 1 Protein, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513299.1
SIO_010081: Tsn
subclass of: SO_0000673
so part of: Tsn
location: complement(join(8029787..8029860,8033423..8033538,8037874..8037970,8038846..8038939,8040161..8040392))
location: region:8029787-8040392:-1
so has part: feature:8040161-8040392:-1:exon
so has part: feature:8038846-8038939:-1:exon
so has part: feature:8037874-8037970:-1:exon
so has part: feature:8033423-8033538:-1:exon
so has part: feature:8029787-8029860:-1:exon

position:8029787:-1
position: 8029787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8040392:-1
position: 8040392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8040161-8040392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8038846-8038939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8037874-8037970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8033423-8033538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8029787-8029860:-1:exon

Tsn
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tsn
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translin isoform X2
translation: MSVSEIFVELQGFLAAEQDIREEIRKVVQCLEQTAREILTLLQGVHQGTGFQDIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEAVCQQCHCWRLLSAPSHLYFHQ
SIO_010081: Tsn
subclass of: SO_0000673
so part of: Tsn
location: complement(join(8029787..8029860,8033423..8033538,8037874..8037970,8038846..8038939,8040161..8040226))
location: region:8029787-8040226:-1
so has part: feature:8040161-8040226:-1:exon
so has part: feature:8038846-8038939:-1:exon
so has part: feature:8037874-8037970:-1:exon
so has part: feature:8033423-8033538:-1:exon
so has part: feature:8029787-8029860:-1:exon

XP_034369190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8040161-8040226:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8038846-8038939:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8037874-8037970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8033423-8033538:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8029787-8029860:-1:exon

Nifk
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Nifk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8054090..8066083
location: region:8054090-8066083:1
so has part: feature:8054090-8066083:1:exon
subclass of: SO_0000010

117716523
type: Gene
SIO_000068: ncbigene

position:8054090:1
position: 8054090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8066083:1
position: 8066083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8054090-8066083:1:exon

Nifk
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nifk
product: nucleolar protein interacting with the FHA domain of MKI67
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 long SRA reads, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513574.1
SIO_010081: Nifk
subclass of: SO_0000673
so part of: Nifk
location: join(8054090..8054253,8056057..8056194,8059976..8060084,8061641..8061855,8062867..8062935,8064819..8064956,8065232..8066083)
location: region:8054090-8066083:1
so has part: feature:8054090-8054253:1:exon
so has part: feature:8056057-8056194:1:exon
so has part: feature:8059976-8060084:1:exon
so has part: feature:8061641-8061855:1:exon
so has part: feature:8062867-8062935:1:exon
so has part: feature:8064819-8064956:1:exon
so has part: feature:8065232-8066083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8054090-8054253:1:exon

position:8054253:1
position: 8054253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8056057-8056194:1:exon

position:8056057:1
position: 8056057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8056194:1
position: 8056194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8059976-8060084:1:exon

position:8059976:1
position: 8059976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8060084:1
position: 8060084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8061641-8061855:1:exon

position:8061641:1
position: 8061641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8061855:1
position: 8061855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8062867-8062935:1:exon

position:8062867:1
position: 8062867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8062935:1
position: 8062935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8064819-8064956:1:exon

position:8064819:1
position: 8064819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8064956:1
position: 8064956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8065232-8066083:1:exon

position:8065232:1
position: 8065232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Nifk
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nifk
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MKI67 FHA domain-interacting nucleolar phosphoprotein
translation: MAELAGPAKPSLALNPDKDSQFAKALTQIQQRAKKQKKKEKVKSGVVYLGHLPSTLSESHIYDYFAQFGDISRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETMDNYLFGERLLSCKFMPREKVHKHLFFSQWNAPFHPPSFPAVQRYNQKRGHLQMLKMEYRFKKKEKLLRKKLAKKGINYSFPSLVLPNPKKGISDIADTPGDSGINQVLPDQKEEPSGVLRRKEKMMKGGISKNIPKKRKRSKRKKSSSVDSQDTTPVCTPTFLERRKSQVMEVGDDKDDEIIFKLPMSPVKEDSQKTPTPASSGRKRKSEQ
SIO_010081: Nifk
subclass of: SO_0000673
so part of: Nifk
location: join(8054149..8054253,8056057..8056194,8059976..8060084,8061641..8061855,8062867..8062935,8064819..8064956,8065232..8065411)
location: region:8054149-8065411:1
so has part: feature:8054149-8054253:1:exon
so has part: feature:8056057-8056194:1:exon
so has part: feature:8059976-8060084:1:exon
so has part: feature:8061641-8061855:1:exon
so has part: feature:8062867-8062935:1:exon
so has part: feature:8064819-8064956:1:exon
so has part: feature:8065232-8065411:1:exon

XP_034369465.1
type: Protein
SIO_000068: ncbiprotein

position:8054149:1
position: 8054149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8065411:1
position: 8065411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8054149-8054253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8056057-8056194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8059976-8060084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8061641-8061855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8062867-8062935:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8064819-8064956:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8065232-8065411:1:exon

Clasp1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Clasp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8136130..8359308
location: region:8136130-8359308:1
so has part: feature:8136130-8359308:1:exon
subclass of: SO_0000010

117716458
type: Gene
SIO_000068: ncbigene

position:8136130:1
position: 8136130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8359308:1
position: 8359308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8136130-8359308:1:exon

Clasp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clasp1
product: cytoplasmic linker associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 1 long SRA read, 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513499.1
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8136130..8136606,8164085..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8260073..8260120,8270293..8270400,8271817..8271843,8273685..8273852,8287701..8287804,8290305..8290328,8291572..8291816,8293958..8294021,8295789..8295857,8296572..8296574,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8359308)
location: region:8136130-8359308:1
so has part: feature:8136130-8136606:1:exon
so has part: feature:8164085-8164563:1:exon
so has part: feature:8203206-8203284:1:exon
so has part: feature:8204595-8204698:1:exon
so has part: feature:8205854-8205945:1:exon
so has part: feature:8207651-8207726:1:exon
so has part: feature:8211526-8211623:1:exon
so has part: feature:8217645-8217712:1:exon
so has part: feature:8244155-8244307:1:exon
so has part: feature:8246939-8247012:1:exon
so has part: feature:8248590-8248682:1:exon
so has part: feature:8250269-8250414:1:exon
so has part: feature:8251269-8251404:1:exon
so has part: feature:8252409-8252479:1:exon
so has part: feature:8253182-8253241:1:exon
so has part: feature:8254661-8254738:1:exon
so has part: feature:8256758-8256925:1:exon
so has part: feature:8257502-8257551:1:exon
so has part: feature:8258144-8258314:1:exon
so has part: feature:8260073-8260120:1:exon
so has part: feature:8270293-8270400:1:exon
so has part: feature:8271817-8271843:1:exon
so has part: feature:8273685-8273852:1:exon
so has part: feature:8287701-8287804:1:exon
so has part: feature:8290305-8290328:1:exon
so has part: feature:8291572-8291816:1:exon
so has part: feature:8293958-8294021:1:exon
so has part: feature:8295789-8295857:1:exon
so has part: feature:8296572-8296574:1:exon
so has part: feature:8296783-8296946:1:exon
so has part: feature:8301271-8301349:1:exon
so has part: feature:8302193-8302336:1:exon
so has part: feature:8312138-8312281:1:exon
so has part: feature:8313144-8313250:1:exon
so has part: feature:8323727-8323877:1:exon
so has part: feature:8332587-8332830:1:exon
so has part: feature:8334991-8335181:1:exon
so has part: feature:8337005-8337133:1:exon
so has part: feature:8350825-8351031:1:exon
so has part: feature:8352871-8352987:1:exon
so has part: feature:8356703-8359308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8136130-8136606:1:exon

position:8136606:1
position: 8136606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8164085-8164563:1:exon

position:8164085:1
position: 8164085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8164563:1
position: 8164563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8203206-8203284:1:exon

position:8203206:1
position: 8203206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8203284:1
position: 8203284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8204595-8204698:1:exon

position:8204595:1
position: 8204595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8204698:1
position: 8204698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8205854-8205945:1:exon

position:8205854:1
position: 8205854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8205945:1
position: 8205945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8207651-8207726:1:exon

position:8207651:1
position: 8207651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8207726:1
position: 8207726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8211526-8211623:1:exon

position:8211526:1
position: 8211526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8211623:1
position: 8211623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8217645-8217712:1:exon

position:8217645:1
position: 8217645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8217712:1
position: 8217712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8244155-8244307:1:exon

position:8244155:1
position: 8244155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8244307:1
position: 8244307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8246939-8247012:1:exon

position:8246939:1
position: 8246939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8247012:1
position: 8247012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8248590-8248682:1:exon

position:8248590:1
position: 8248590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8248682:1
position: 8248682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8250269-8250414:1:exon

position:8250269:1
position: 8250269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8250414:1
position: 8250414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8251269-8251404:1:exon

position:8251269:1
position: 8251269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8251404:1
position: 8251404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8252409-8252479:1:exon

position:8252409:1
position: 8252409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8252479:1
position: 8252479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8253182-8253241:1:exon

position:8253182:1
position: 8253182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8253241:1
position: 8253241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8254661-8254738:1:exon

position:8254661:1
position: 8254661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8254738:1
position: 8254738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8256758-8256925:1:exon

position:8256758:1
position: 8256758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8256925:1
position: 8256925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8257502-8257551:1:exon

position:8257502:1
position: 8257502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8257551:1
position: 8257551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:8258144-8258314:1:exon

position:8258144:1
position: 8258144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8258314:1
position: 8258314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:8260073-8260120:1:exon

position:8260073:1
position: 8260073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8260120:1
position: 8260120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:8270293-8270400:1:exon

position:8270293:1
position: 8270293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8270400:1
position: 8270400
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urn:…
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SIO_000628: feature:8271817-8271843:1:exon

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position:8271843:1
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urn:…
SIO_000300: 23
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position:8273852:1
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urn:…
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urn:…
SIO_000300: 25
SIO_000628: feature:8290305-8290328:1:exon

position:8290305:1
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position:8290328:1
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urn:…
SIO_000300: 26
SIO_000628: feature:8291572-8291816:1:exon

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urn:…
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urn:…
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urn:…
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SIO_000628: feature:8296572-8296574:1:exon

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urn:…
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urn:…
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urn:…
SIO_000300: 32
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urn:…
SIO_000300: 33
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urn:…
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urn:…
SIO_000300: 35
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urn:…
SIO_000300: 36
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urn:…
SIO_000300: 37
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position:8335181:1
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urn:…
SIO_000300: 38
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urn:…
SIO_000300: 39
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urn:…
SIO_000300: 40
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urn:…
SIO_000300: 41
SIO_000628: feature:8356703-8359308:1:exon

position:8356703:1
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reference: sequence
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Clasp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clasp1
product: cytoplasmic linker associated protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 8 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513503.1
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8136130..8136606,8164085..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8270293..8270400,8273685..8273852,8287701..8287804,8291572..8291816,8293958..8294021,8294092..8294094,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8359308)
location: region:8136130-8359308:1
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urn:…
SIO_000300: 1
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SIO_000628: feature:8252409-8252479:1:exon

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SIO_000628: feature:8257502-8257551:1:exon

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SIO_000628: feature:8258144-8258314:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8270293-8270400:1:exon

urn:…
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SIO_000628: feature:8273685-8273852:1:exon

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SIO_000300: 22
SIO_000628: feature:8287701-8287804:1:exon

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SIO_000300: 24
SIO_000628: feature:8293958-8294021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8294092-8294094:1:exon

position:8294092:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8294094:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:8296783-8296946:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8301271-8301349:1:exon

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SIO_000628: feature:8312138-8312281:1:exon

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SIO_000628: feature:8313144-8313250:1:exon

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SIO_000300: 31
SIO_000628: feature:8323727-8323877:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8332587-8332830:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8334991-8335181:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8337005-8337133:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8350825-8351031:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8352871-8352987:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8356703-8359308:1:exon

Clasp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clasp1
product: cytoplasmic linker associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 2 long SRA reads, 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513500.1
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8136130..8136606,8164085..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8270293..8270400,8273685..8273852,8287701..8287804,8291572..8291816,8293958..8294021,8295789..8295857,8296572..8296574,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8359308)
location: region:8136130-8359308:1
so has part: feature:8136130-8136606:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:8164085-8164563:1:exon

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urn:…
SIO_000300: 4
SIO_000628: feature:8204595-8204698:1:exon

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urn:…
SIO_000300: 35
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urn:…
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SIO_000628: feature:8350825-8351031:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8352871-8352987:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:8356703-8359308:1:exon

Clasp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clasp1
product: cytoplasmic linker associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 7 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513502.1
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8136130..8136606,8164085..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8260073..8260120,8270293..8270400,8273685..8273852,8287701..8287804,8291572..8291816,8293958..8294021,8294092..8294094,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8357557)
location: region:8136130-8357557:1
so has part: feature:8136130-8136606:1:exon
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so has part: feature:8207651-8207726:1:exon
so has part: feature:8211526-8211623:1:exon
so has part: feature:8217645-8217712:1:exon
so has part: feature:8244155-8244307:1:exon
so has part: feature:8246939-8247012:1:exon
so has part: feature:8248590-8248682:1:exon
so has part: feature:8250269-8250414:1:exon
so has part: feature:8251269-8251404:1:exon
so has part: feature:8252409-8252479:1:exon
so has part: feature:8253182-8253241:1:exon
so has part: feature:8254661-8254738:1:exon
so has part: feature:8256758-8256925:1:exon
so has part: feature:8257502-8257551:1:exon
so has part: feature:8258144-8258314:1:exon
so has part: feature:8260073-8260120:1:exon
so has part: feature:8270293-8270400:1:exon
so has part: feature:8273685-8273852:1:exon
so has part: feature:8287701-8287804:1:exon
so has part: feature:8291572-8291816:1:exon
so has part: feature:8293958-8294021:1:exon
so has part: feature:8294092-8294094:1:exon
so has part: feature:8296783-8296946:1:exon
so has part: feature:8301271-8301349:1:exon
so has part: feature:8302193-8302336:1:exon
so has part: feature:8312138-8312281:1:exon
so has part: feature:8313144-8313250:1:exon
so has part: feature:8323727-8323877:1:exon
so has part: feature:8332587-8332830:1:exon
so has part: feature:8334991-8335181:1:exon
so has part: feature:8337005-8337133:1:exon
so has part: feature:8350825-8351031:1:exon
so has part: feature:8352871-8352987:1:exon
so has part: feature:8356703-8357557:1:exon

position:8357557:1
position: 8357557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8136130-8136606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8164085-8164563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8203206-8203284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8204595-8204698:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8205854-8205945:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8207651-8207726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8211526-8211623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8217645-8217712:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8244155-8244307:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8246939-8247012:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8248590-8248682:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8250269-8250414:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8251269-8251404:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8252409-8252479:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8253182-8253241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8254661-8254738:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8256758-8256925:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8257502-8257551:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8258144-8258314:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8260073-8260120:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8270293-8270400:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8273685-8273852:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8287701-8287804:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8291572-8291816:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8293958-8294021:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8294092-8294094:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8296783-8296946:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8301271-8301349:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8302193-8302336:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8312138-8312281:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8313144-8313250:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8323727-8323877:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8332587-8332830:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8334991-8335181:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8337005-8337133:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8350825-8351031:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8352871-8352987:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:8356703-8357557:1:exon

Clasp1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Clasp1
product: cytoplasmic linker associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 9 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513501.1
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8136130..8136606,8164085..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8270293..8270400,8271817..8271843,8273685..8273852,8287701..8287804,8290305..8290328,8291572..8291816,8293958..8294021,8294092..8294094,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8356976)
location: region:8136130-8356976:1
so has part: feature:8136130-8136606:1:exon
so has part: feature:8164085-8164563:1:exon
so has part: feature:8203206-8203284:1:exon
so has part: feature:8204595-8204698:1:exon
so has part: feature:8205854-8205945:1:exon
so has part: feature:8207651-8207726:1:exon
so has part: feature:8211526-8211623:1:exon
so has part: feature:8217645-8217712:1:exon
so has part: feature:8244155-8244307:1:exon
so has part: feature:8246939-8247012:1:exon
so has part: feature:8248590-8248682:1:exon
so has part: feature:8250269-8250414:1:exon
so has part: feature:8251269-8251404:1:exon
so has part: feature:8252409-8252479:1:exon
so has part: feature:8253182-8253241:1:exon
so has part: feature:8254661-8254738:1:exon
so has part: feature:8256758-8256925:1:exon
so has part: feature:8257502-8257551:1:exon
so has part: feature:8258144-8258314:1:exon
so has part: feature:8270293-8270400:1:exon
so has part: feature:8271817-8271843:1:exon
so has part: feature:8273685-8273852:1:exon
so has part: feature:8287701-8287804:1:exon
so has part: feature:8290305-8290328:1:exon
so has part: feature:8291572-8291816:1:exon
so has part: feature:8293958-8294021:1:exon
so has part: feature:8294092-8294094:1:exon
so has part: feature:8296783-8296946:1:exon
so has part: feature:8301271-8301349:1:exon
so has part: feature:8302193-8302336:1:exon
so has part: feature:8312138-8312281:1:exon
so has part: feature:8313144-8313250:1:exon
so has part: feature:8323727-8323877:1:exon
so has part: feature:8332587-8332830:1:exon
so has part: feature:8334991-8335181:1:exon
so has part: feature:8337005-8337133:1:exon
so has part: feature:8350825-8351031:1:exon
so has part: feature:8352871-8352987:1:exon
so has part: feature:8356703-8356976:1:exon

position:8356976:1
position: 8356976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8136130-8136606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8164085-8164563:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8203206-8203284:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8204595-8204698:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8205854-8205945:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8207651-8207726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8211526-8211623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8217645-8217712:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8244155-8244307:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8246939-8247012:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8248590-8248682:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8250269-8250414:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8251269-8251404:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8252409-8252479:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8253182-8253241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8254661-8254738:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8256758-8256925:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8257502-8257551:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8258144-8258314:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8270293-8270400:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8271817-8271843:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8273685-8273852:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8287701-8287804:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8290305-8290328:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8291572-8291816:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8293958-8294021:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8294092-8294094:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8296783-8296946:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8301271-8301349:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8302193-8302336:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8312138-8312281:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8313144-8313250:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8323727-8323877:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8332587-8332830:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8334991-8335181:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8337005-8337133:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8350825-8351031:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:8352871-8352987:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:8356703-8356976:1:exon

Clasp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clasp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CLIP-associating protein 1 isoform X1
translation: MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSSSSKAPSSSRRNVSMGTTRRLMSSSLGSKSSAAREGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRGSTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGSTAFSSAAALPPGSYASLESRHMREDLEYVGLDAGRIRTRRQSSGSTTNVASTPSDSRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQSGRVPGAVNAMRVLSTSTDLEAAVADALLLGDARSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKIADSEAECEDKEGNLFPSEGSCPRVFSMFLETLVDFVIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTGVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGGSEVEGGRMALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8164369..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8260073..8260120,8270293..8270400,8271817..8271843,8273685..8273852,8287701..8287804,8290305..8290328,8291572..8291816,8293958..8294021,8295789..8295857,8296572..8296574,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8356789)
location: region:8164369-8356789:1
so has part: feature:8164369-8164563:1:exon
so has part: feature:8203206-8203284:1:exon
so has part: feature:8204595-8204698:1:exon
so has part: feature:8205854-8205945:1:exon
so has part: feature:8207651-8207726:1:exon
so has part: feature:8211526-8211623:1:exon
so has part: feature:8217645-8217712:1:exon
so has part: feature:8244155-8244307:1:exon
so has part: feature:8246939-8247012:1:exon
so has part: feature:8248590-8248682:1:exon
so has part: feature:8250269-8250414:1:exon
so has part: feature:8251269-8251404:1:exon
so has part: feature:8252409-8252479:1:exon
so has part: feature:8253182-8253241:1:exon
so has part: feature:8254661-8254738:1:exon
so has part: feature:8256758-8256925:1:exon
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so has part: feature:8260073-8260120:1:exon
so has part: feature:8270293-8270400:1:exon
so has part: feature:8271817-8271843:1:exon
so has part: feature:8273685-8273852:1:exon
so has part: feature:8287701-8287804:1:exon
so has part: feature:8290305-8290328:1:exon
so has part: feature:8291572-8291816:1:exon
so has part: feature:8293958-8294021:1:exon
so has part: feature:8295789-8295857:1:exon
so has part: feature:8296572-8296574:1:exon
so has part: feature:8296783-8296946:1:exon
so has part: feature:8301271-8301349:1:exon
so has part: feature:8302193-8302336:1:exon
so has part: feature:8312138-8312281:1:exon
so has part: feature:8313144-8313250:1:exon
so has part: feature:8323727-8323877:1:exon
so has part: feature:8332587-8332830:1:exon
so has part: feature:8334991-8335181:1:exon
so has part: feature:8337005-8337133:1:exon
so has part: feature:8350825-8351031:1:exon
so has part: feature:8352871-8352987:1:exon
so has part: feature:8356703-8356789:1:exon

XP_034369390.1
type: Protein
SIO_000068: ncbiprotein

position:8164369:1
position: 8164369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8356789:1
position: 8356789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8164369-8164563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8203206-8203284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8204595-8204698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8205854-8205945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8207651-8207726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8211526-8211623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8217645-8217712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8244155-8244307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8246939-8247012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8248590-8248682:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8250269-8250414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8251269-8251404:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8252409-8252479:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8253182-8253241:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8254661-8254738:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8256758-8256925:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8257502-8257551:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8258144-8258314:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8260073-8260120:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8270293-8270400:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8271817-8271843:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8273685-8273852:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8287701-8287804:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8290305-8290328:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8291572-8291816:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8293958-8294021:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8295789-8295857:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8296572-8296574:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8296783-8296946:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8301271-8301349:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8302193-8302336:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8312138-8312281:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8313144-8313250:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8323727-8323877:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8332587-8332830:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8334991-8335181:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8337005-8337133:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:8350825-8351031:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:8352871-8352987:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:8356703-8356789:1:exon

Clasp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clasp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CLIP-associating protein 1 isoform X4
translation: MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSSSSKAPSSSRRNVSMGTTRRLMSSSLGSKSSAAREGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRGSTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGSTAFSSAAALPPGSYASLESRHMREDLEYVGLDAGRIRTRRQSSGSTTNVASTPSDSRGRSRAKVVSQSQPGSRSSSPGKLLGSGYGGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQSGRVPGAVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTGVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGGSEVEGGRMALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8164369..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8260073..8260120,8270293..8270400,8273685..8273852,8287701..8287804,8291572..8291816,8293958..8294021,8294092..8294094,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8356789)
location: region:8164369-8356789:1
so has part: feature:8164369-8164563:1:exon
so has part: feature:8203206-8203284:1:exon
so has part: feature:8204595-8204698:1:exon
so has part: feature:8205854-8205945:1:exon
so has part: feature:8207651-8207726:1:exon
so has part: feature:8211526-8211623:1:exon
so has part: feature:8217645-8217712:1:exon
so has part: feature:8244155-8244307:1:exon
so has part: feature:8246939-8247012:1:exon
so has part: feature:8248590-8248682:1:exon
so has part: feature:8250269-8250414:1:exon
so has part: feature:8251269-8251404:1:exon
so has part: feature:8252409-8252479:1:exon
so has part: feature:8253182-8253241:1:exon
so has part: feature:8254661-8254738:1:exon
so has part: feature:8256758-8256925:1:exon
so has part: feature:8257502-8257551:1:exon
so has part: feature:8258144-8258314:1:exon
so has part: feature:8260073-8260120:1:exon
so has part: feature:8270293-8270400:1:exon
so has part: feature:8273685-8273852:1:exon
so has part: feature:8287701-8287804:1:exon
so has part: feature:8291572-8291816:1:exon
so has part: feature:8293958-8294021:1:exon
so has part: feature:8294092-8294094:1:exon
so has part: feature:8296783-8296946:1:exon
so has part: feature:8301271-8301349:1:exon
so has part: feature:8302193-8302336:1:exon
so has part: feature:8312138-8312281:1:exon
so has part: feature:8313144-8313250:1:exon
so has part: feature:8323727-8323877:1:exon
so has part: feature:8332587-8332830:1:exon
so has part: feature:8334991-8335181:1:exon
so has part: feature:8337005-8337133:1:exon
so has part: feature:8350825-8351031:1:exon
so has part: feature:8352871-8352987:1:exon
so has part: feature:8356703-8356789:1:exon

XP_034369393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8164369-8164563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8203206-8203284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8204595-8204698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8205854-8205945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8207651-8207726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8211526-8211623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8217645-8217712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8244155-8244307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8246939-8247012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8248590-8248682:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8250269-8250414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8251269-8251404:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8252409-8252479:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8253182-8253241:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8254661-8254738:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8256758-8256925:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8257502-8257551:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8258144-8258314:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8260073-8260120:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8270293-8270400:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8273685-8273852:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8287701-8287804:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8291572-8291816:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8293958-8294021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8294092-8294094:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8296783-8296946:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8301271-8301349:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8302193-8302336:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8312138-8312281:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8313144-8313250:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8323727-8323877:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8332587-8332830:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8334991-8335181:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8337005-8337133:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8350825-8351031:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8352871-8352987:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8356703-8356789:1:exon

Clasp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clasp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CLIP-associating protein 1 isoform X3
translation: MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSSSSKAPSSSRRNVSMGTTRRLMSSSLGSKSSAAREGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRGSTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGSTAFSSAAALPPGSYASLGRIRTRRQSSGSTTNVASTPSDSRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYGGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQSGRVPGAVNAMRVLSTSTDLEAAVADALLLGDARSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTGVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGGSEVEGGRMALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8164369..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8270293..8270400,8271817..8271843,8273685..8273852,8287701..8287804,8290305..8290328,8291572..8291816,8293958..8294021,8294092..8294094,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8356789)
location: region:8164369-8356789:1
so has part: feature:8164369-8164563:1:exon
so has part: feature:8203206-8203284:1:exon
so has part: feature:8204595-8204698:1:exon
so has part: feature:8205854-8205945:1:exon
so has part: feature:8207651-8207726:1:exon
so has part: feature:8211526-8211623:1:exon
so has part: feature:8217645-8217712:1:exon
so has part: feature:8244155-8244307:1:exon
so has part: feature:8246939-8247012:1:exon
so has part: feature:8248590-8248682:1:exon
so has part: feature:8250269-8250414:1:exon
so has part: feature:8251269-8251404:1:exon
so has part: feature:8252409-8252479:1:exon
so has part: feature:8253182-8253241:1:exon
so has part: feature:8254661-8254738:1:exon
so has part: feature:8256758-8256925:1:exon
so has part: feature:8257502-8257551:1:exon
so has part: feature:8258144-8258314:1:exon
so has part: feature:8270293-8270400:1:exon
so has part: feature:8271817-8271843:1:exon
so has part: feature:8273685-8273852:1:exon
so has part: feature:8287701-8287804:1:exon
so has part: feature:8290305-8290328:1:exon
so has part: feature:8291572-8291816:1:exon
so has part: feature:8293958-8294021:1:exon
so has part: feature:8294092-8294094:1:exon
so has part: feature:8296783-8296946:1:exon
so has part: feature:8301271-8301349:1:exon
so has part: feature:8302193-8302336:1:exon
so has part: feature:8312138-8312281:1:exon
so has part: feature:8313144-8313250:1:exon
so has part: feature:8323727-8323877:1:exon
so has part: feature:8332587-8332830:1:exon
so has part: feature:8334991-8335181:1:exon
so has part: feature:8337005-8337133:1:exon
so has part: feature:8350825-8351031:1:exon
so has part: feature:8352871-8352987:1:exon
so has part: feature:8356703-8356789:1:exon

XP_034369392.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8164369-8164563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8203206-8203284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8204595-8204698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8205854-8205945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8207651-8207726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8211526-8211623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8217645-8217712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8244155-8244307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8246939-8247012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8248590-8248682:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8250269-8250414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8251269-8251404:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8252409-8252479:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8253182-8253241:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8254661-8254738:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8256758-8256925:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8257502-8257551:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8258144-8258314:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8270293-8270400:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8271817-8271843:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8273685-8273852:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8287701-8287804:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8290305-8290328:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8291572-8291816:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8293958-8294021:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8294092-8294094:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8296783-8296946:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8301271-8301349:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8302193-8302336:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8312138-8312281:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8313144-8313250:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8323727-8323877:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8332587-8332830:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8334991-8335181:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8337005-8337133:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8350825-8351031:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8352871-8352987:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:8356703-8356789:1:exon

Clasp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clasp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CLIP-associating protein 1 isoform X5
translation: MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSSSSKAPSSSRRNVSMGTTRRLMSSSLGSKSSAAREGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRGSTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGSTAFSSAAALPPGSYASLGRIRTRRQSSGSTTNVASTPSDSRGRSRAKVVSQSQPGSRSSSPGKLLGSGYGGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQSGRVPGAVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTGVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGGSEVEGGRMALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8164369..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8270293..8270400,8273685..8273852,8287701..8287804,8291572..8291816,8293958..8294021,8294092..8294094,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8356789)
location: region:8164369-8356789:1
so has part: feature:8164369-8164563:1:exon
so has part: feature:8203206-8203284:1:exon
so has part: feature:8204595-8204698:1:exon
so has part: feature:8205854-8205945:1:exon
so has part: feature:8207651-8207726:1:exon
so has part: feature:8211526-8211623:1:exon
so has part: feature:8217645-8217712:1:exon
so has part: feature:8244155-8244307:1:exon
so has part: feature:8246939-8247012:1:exon
so has part: feature:8248590-8248682:1:exon
so has part: feature:8250269-8250414:1:exon
so has part: feature:8251269-8251404:1:exon
so has part: feature:8252409-8252479:1:exon
so has part: feature:8253182-8253241:1:exon
so has part: feature:8254661-8254738:1:exon
so has part: feature:8256758-8256925:1:exon
so has part: feature:8257502-8257551:1:exon
so has part: feature:8258144-8258314:1:exon
so has part: feature:8270293-8270400:1:exon
so has part: feature:8273685-8273852:1:exon
so has part: feature:8287701-8287804:1:exon
so has part: feature:8291572-8291816:1:exon
so has part: feature:8293958-8294021:1:exon
so has part: feature:8294092-8294094:1:exon
so has part: feature:8296783-8296946:1:exon
so has part: feature:8301271-8301349:1:exon
so has part: feature:8302193-8302336:1:exon
so has part: feature:8312138-8312281:1:exon
so has part: feature:8313144-8313250:1:exon
so has part: feature:8323727-8323877:1:exon
so has part: feature:8332587-8332830:1:exon
so has part: feature:8334991-8335181:1:exon
so has part: feature:8337005-8337133:1:exon
so has part: feature:8350825-8351031:1:exon
so has part: feature:8352871-8352987:1:exon
so has part: feature:8356703-8356789:1:exon

XP_034369394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8164369-8164563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8203206-8203284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8204595-8204698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8205854-8205945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8207651-8207726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8211526-8211623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8217645-8217712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8244155-8244307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8246939-8247012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8248590-8248682:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8250269-8250414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8251269-8251404:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8252409-8252479:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8253182-8253241:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8254661-8254738:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8256758-8256925:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8257502-8257551:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8258144-8258314:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8270293-8270400:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8273685-8273852:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8287701-8287804:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8291572-8291816:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8293958-8294021:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8294092-8294094:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8296783-8296946:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8301271-8301349:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8302193-8302336:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8312138-8312281:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8313144-8313250:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8323727-8323877:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8332587-8332830:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8334991-8335181:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8337005-8337133:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8350825-8351031:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8352871-8352987:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8356703-8356789:1:exon

Clasp1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Clasp1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CLIP-associating protein 1 isoform X2
translation: MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVNSSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMDQAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPNSQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKNFDDEDSVDGNRPSSASSSSSKAPSSSRRNVSMGTTRRLMSSSLGSKSSAAREGAGAVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRGSTVSTKSVSTTGSLQRSRSDIDVNAAASAKSKVSSSSGSTAFSSAAALPPGSYASLGRIRTRRQSSGSTTNVASTPSDSRGRSRAKVVSQSQPGSRSSSPGKLLGSGYGGLAGGSSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLDRFGLGQSGRVPGAVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKIADSEAECEDKEGNLFPSEGSCPRVFSMFLETLVDFVIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTGVGSPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDIVSRDGGAASPATEGRGGSEVEGGRMALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
SIO_010081: Clasp1
subclass of: SO_0000673
so part of: Clasp1
location: join(8164369..8164563,8203206..8203284,8204595..8204698,8205854..8205945,8207651..8207726,8211526..8211623,8217645..8217712,8244155..8244307,8246939..8247012,8248590..8248682,8250269..8250414,8251269..8251404,8252409..8252479,8253182..8253241,8254661..8254738,8256758..8256925,8257502..8257551,8258144..8258314,8270293..8270400,8273685..8273852,8287701..8287804,8291572..8291816,8293958..8294021,8295789..8295857,8296572..8296574,8296783..8296946,8301271..8301349,8302193..8302336,8312138..8312281,8313144..8313250,8323727..8323877,8332587..8332830,8334991..8335181,8337005..8337133,8350825..8351031,8352871..8352987,8356703..8356789)
location: region:8164369-8356789:1
so has part: feature:8164369-8164563:1:exon
so has part: feature:8203206-8203284:1:exon
so has part: feature:8204595-8204698:1:exon
so has part: feature:8205854-8205945:1:exon
so has part: feature:8207651-8207726:1:exon
so has part: feature:8211526-8211623:1:exon
so has part: feature:8217645-8217712:1:exon
so has part: feature:8244155-8244307:1:exon
so has part: feature:8246939-8247012:1:exon
so has part: feature:8248590-8248682:1:exon
so has part: feature:8250269-8250414:1:exon
so has part: feature:8251269-8251404:1:exon
so has part: feature:8252409-8252479:1:exon
so has part: feature:8253182-8253241:1:exon
so has part: feature:8254661-8254738:1:exon
so has part: feature:8256758-8256925:1:exon
so has part: feature:8257502-8257551:1:exon
so has part: feature:8258144-8258314:1:exon
so has part: feature:8270293-8270400:1:exon
so has part: feature:8273685-8273852:1:exon
so has part: feature:8287701-8287804:1:exon
so has part: feature:8291572-8291816:1:exon
so has part: feature:8293958-8294021:1:exon
so has part: feature:8295789-8295857:1:exon
so has part: feature:8296572-8296574:1:exon
so has part: feature:8296783-8296946:1:exon
so has part: feature:8301271-8301349:1:exon
so has part: feature:8302193-8302336:1:exon
so has part: feature:8312138-8312281:1:exon
so has part: feature:8313144-8313250:1:exon
so has part: feature:8323727-8323877:1:exon
so has part: feature:8332587-8332830:1:exon
so has part: feature:8334991-8335181:1:exon
so has part: feature:8337005-8337133:1:exon
so has part: feature:8350825-8351031:1:exon
so has part: feature:8352871-8352987:1:exon
so has part: feature:8356703-8356789:1:exon

XP_034369391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8164369-8164563:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8203206-8203284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8204595-8204698:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8205854-8205945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8207651-8207726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8211526-8211623:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8217645-8217712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8244155-8244307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8246939-8247012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8248590-8248682:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8250269-8250414:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8251269-8251404:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8252409-8252479:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8253182-8253241:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8254661-8254738:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8256758-8256925:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8257502-8257551:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8258144-8258314:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8270293-8270400:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:8273685-8273852:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:8287701-8287804:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:8291572-8291816:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:8293958-8294021:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:8295789-8295857:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:8296572-8296574:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:8296783-8296946:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:8301271-8301349:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:8302193-8302336:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:8312138-8312281:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:8313144-8313250:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:8323727-8323877:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:8332587-8332830:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:8334991-8335181:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:8337005-8337133:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:8350825-8351031:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:8352871-8352987:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:8356703-8356789:1:exon

LOC117716658
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716658
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8196678..8196808)
location: region:8196678-8196808:-1
so has part: feature:8196678-8196808:-1:exon
subclass of: SO_0000578

117716658
type: Gene
SIO_000068: ncbigene

position:8196678:-1
position: 8196678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8196808:-1
position: 8196808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8196678-8196808:-1:exon

LOC117716658
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117716658
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607772.1
SIO_010081: LOC117716658
subclass of: SO_0000673
so part of: LOC117716658
location: complement(8196678..8196808)
location: region:8196678-8196808:-1
so has part: feature:8196678-8196808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8196678-8196808:-1:exon

LOC117716678
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716678
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8202522..8202646)
location: region:8202522-8202646:-1
so has part: feature:8202522-8202646:-1:exon
subclass of: SO_0000623

117716678
type: Gene
SIO_000068: ncbigene

position:8202522:-1
position: 8202522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8202646:-1
position: 8202646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8202522-8202646:-1:exon

LOC117716678
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117716678
product: U4atac minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00618
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607784.1
SIO_010081: LOC117716678
subclass of: SO_0000673
so part of: LOC117716678
location: complement(8202522..8202646)
location: region:8202522-8202646:-1
so has part: feature:8202522-8202646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8202522-8202646:-1:exon

Tfcp2l1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tfcp2l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8378846..8428492
location: region:8378846-8428492:1
so has part: feature:8378846-8428492:1:exon
subclass of: SO_0000010

117716351
type: Gene
SIO_000068: ncbigene

position:8378846:1
position: 8378846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8428492:1
position: 8428492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8378846-8428492:1:exon

Tfcp2l1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tfcp2l1
product: transcription factor CP2 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513409.1
SIO_010081: Tfcp2l1
subclass of: SO_0000673
so part of: Tfcp2l1
location: join(8378846..8378907,8383215..8383366,8405327..8405403,8405893..8405998,8406695..8406801,8408256..8408408,8411233..8411343,8414478..8414569,8417131..8417179,8417262..8417355,8418387..8418477,8420584..8420687,8421283..8421425,8426749..8426800,8428446..8428492)
location: region:8378846-8428492:1
so has part: feature:8378846-8378907:1:exon
so has part: feature:8383215-8383366:1:exon
so has part: feature:8405327-8405403:1:exon
so has part: feature:8405893-8405998:1:exon
so has part: feature:8406695-8406801:1:exon
so has part: feature:8408256-8408408:1:exon
so has part: feature:8411233-8411343:1:exon
so has part: feature:8414478-8414569:1:exon
so has part: feature:8417131-8417179:1:exon
so has part: feature:8417262-8417355:1:exon
so has part: feature:8418387-8418477:1:exon
so has part: feature:8420584-8420687:1:exon
so has part: feature:8421283-8421425:1:exon
so has part: feature:8426749-8426800:1:exon
so has part: feature:8428446-8428492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8378846-8378907:1:exon

position:8378907:1
position: 8378907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8383215-8383366:1:exon

position:8383215:1
position: 8383215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8383366:1
position: 8383366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8405327-8405403:1:exon

position:8405327:1
position: 8405327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8405403:1
position: 8405403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8405893-8405998:1:exon

position:8405893:1
position: 8405893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8405998:1
position: 8405998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8406695-8406801:1:exon

position:8406695:1
position: 8406695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8406801:1
position: 8406801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8408256-8408408:1:exon

position:8408256:1
position: 8408256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8408408:1
position: 8408408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8411233-8411343:1:exon

position:8411233:1
position: 8411233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8411343:1
position: 8411343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8414478-8414569:1:exon

position:8414478:1
position: 8414478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8414569:1
position: 8414569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8417131-8417179:1:exon

position:8417131:1
position: 8417131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8417179:1
position: 8417179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8417262-8417355:1:exon

position:8417262:1
position: 8417262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8417355:1
position: 8417355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8418387-8418477:1:exon

position:8418387:1
position: 8418387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8418477:1
position: 8418477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8420584-8420687:1:exon

position:8420584:1
position: 8420584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8420687:1
position: 8420687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8421283-8421425:1:exon

position:8421283:1
position: 8421283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8421425:1
position: 8421425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8426749-8426800:1:exon

position:8426749:1
position: 8426749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8426800:1
position: 8426800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8428446-8428492:1:exon

position:8428446:1
position: 8428446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Tfcp2l1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tfcp2l1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor CP2-like protein 1
translation: MLFWHTQPEHYNQHNSGSYLRDVLALPIFKQEEPQLSPENGTRLPPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEYQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPAKRASAFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQEKEKYQPSYETTILTECSPWPDVPYQANSTPSPSYNGSPNSFGLREGNSSPSHPVEPLPLGSDHLLPSASIQDAQQWLHRNRFSQFCWLFASFSGADLLKMSRDDLVQVCGPADGIRLFNAIKGRNVRPKMTIYVCQELEQNQLPLPQKQDDNGDNSLCVYHAIFLEELTTLELTEKIASLFSIPPQHIHRVYRQGPAGIHVVVSNEMVQNFQDESCFILSTLKAESNDGYHIILKCGL
SIO_010081: Tfcp2l1
subclass of: SO_0000673
so part of: Tfcp2l1
location: join(8378846..8378907,8383215..8383366,8405327..8405403,8405893..8405998,8406695..8406801,8408256..8408408,8411233..8411343,8414478..8414569,8417131..8417179,8417262..8417355,8418387..8418477,8420584..8420687,8421283..8421425,8426749..8426800,8428446..8428492)
location: region:8378846-8428492:1
so has part: feature:8378846-8378907:1:exon
so has part: feature:8383215-8383366:1:exon
so has part: feature:8405327-8405403:1:exon
so has part: feature:8405893-8405998:1:exon
so has part: feature:8406695-8406801:1:exon
so has part: feature:8408256-8408408:1:exon
so has part: feature:8411233-8411343:1:exon
so has part: feature:8414478-8414569:1:exon
so has part: feature:8417131-8417179:1:exon
so has part: feature:8417262-8417355:1:exon
so has part: feature:8418387-8418477:1:exon
so has part: feature:8420584-8420687:1:exon
so has part: feature:8421283-8421425:1:exon
so has part: feature:8426749-8426800:1:exon
so has part: feature:8428446-8428492:1:exon

XP_034369300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8378846-8378907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8383215-8383366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8405327-8405403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8405893-8405998:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8406695-8406801:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8408256-8408408:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8411233-8411343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8414478-8414569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8417131-8417179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8417262-8417355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8418387-8418477:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8420584-8420687:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8421283-8421425:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8426749-8426800:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8428446-8428492:1:exon

LOC117716679
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716679
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 8432693..8432821
location: region:8432693-8432821:1
so has part: feature:8432693-8432821:1:exon

117716679
type: Gene
SIO_000068: ncbigene

position:8432693:1
position: 8432693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8432821:1
position: 8432821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8432693-8432821:1:exon

LOC117716679
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716679
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117716679
subclass of: SO_0000673
so part of: LOC117716679
location: 8432693..8432821
location: region:8432693-8432821:1
so has part: feature:8432693-8432821:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8432693-8432821:1:exon

LOC117716433
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8560129..8560840
location: region:8560129-8560840:1
so has part: feature:8560129-8560840:1:exon

117716433
type: Gene
SIO_000068: ncbigene

position:8560129:1
position: 8560129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8560840:1
position: 8560840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8560129-8560840:1:exon

LOC117716433
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716433
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC117716433
subclass of: SO_0000673
so part of: LOC117716433
location: 8560129..8560840
location: region:8560129-8560840:1
so has part: feature:8560129-8560840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8560129-8560840:1:exon

Gli2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Gli2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8586372..8641470)
location: region:8586372-8641470:-1
so has part: feature:8586372-8641470:-1:exon
subclass of: SO_0000010

117716542
type: Gene
SIO_000068: ncbigene

position:8586372:-1
position: 8586372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8641470:-1
position: 8641470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8586372-8641470:-1:exon

Gli2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Gli2
product: GLI family zinc finger 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513602.1
SIO_010081: Gli2
subclass of: SO_0000673
so part of: Gli2
location: complement(join(8586372..8590321,8591435..8591771,8593611..8593892,8595914..8596078,8597532..8597681,8600049..8600183,8604836..8604958,8605993..8606209,8607012..8607213,8617816..8618001,8618814..8619016,8641368..8641470))
location: region:8586372-8641470:-1
so has part: feature:8641368-8641470:-1:exon
so has part: feature:8618814-8619016:-1:exon
so has part: feature:8617816-8618001:-1:exon
so has part: feature:8607012-8607213:-1:exon
so has part: feature:8605993-8606209:-1:exon
so has part: feature:8604836-8604958:-1:exon
so has part: feature:8600049-8600183:-1:exon
so has part: feature:8597532-8597681:-1:exon
so has part: feature:8595914-8596078:-1:exon
so has part: feature:8593611-8593892:-1:exon
so has part: feature:8591435-8591771:-1:exon
so has part: feature:8586372-8590321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8641368-8641470:-1:exon

position:8641368:-1
position: 8641368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8618814-8619016:-1:exon

position:8618814:-1
position: 8618814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8619016:-1
position: 8619016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8617816-8618001:-1:exon

position:8617816:-1
position: 8617816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8618001:-1
position: 8618001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8607012-8607213:-1:exon

position:8607012:-1
position: 8607012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8607213:-1
position: 8607213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8605993-8606209:-1:exon

position:8605993:-1
position: 8605993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8606209:-1
position: 8606209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8604836-8604958:-1:exon

position:8604836:-1
position: 8604836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8604958:-1
position: 8604958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8600049-8600183:-1:exon

position:8600049:-1
position: 8600049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8600183:-1
position: 8600183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8597532-8597681:-1:exon

position:8597532:-1
position: 8597532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8597681:-1
position: 8597681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8595914-8596078:-1:exon

position:8595914:-1
position: 8595914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8596078:-1
position: 8596078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8593611-8593892:-1:exon

position:8593611:-1
position: 8593611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8593892:-1
position: 8593892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8591435-8591771:-1:exon

position:8591435:-1
position: 8591435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8591771:-1
position: 8591771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8586372-8590321:-1:exon

position:8590321:-1
position: 8590321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Gli2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Gli2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein GLI2
translation: MRHQEGRCHYDPHSVHGVHGPPTLSGSPVISDISLIRLSPHPAGPGESPFSTHHPYVNPHMEHYLRSVHSSPTLSMISAARGLSPADVAHEHLKERGLFSLAAPGTNPSDYYHQMTLMASHPTPYGDLLMQSGGAPSAPHLHDYLNPVDASRFSSPRVTPRLSRKRALSISPLSDASLDLQRMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGALSPAFTFPHPINPVAYQQILSQQRGLGSAFGHTPPLIQPSPTFLAQQPMALSPISTMPTQLSSSGSNCLNDANQNKQNSESAVSSTVNPITIHKRSKVKTEAEGLRPASPLGLTQEQLADLKEDLDRDDCKQEAEVVIYETNCHWADCTKEYDTQEQLVHHINNEHIHGEKKEFVCRWQACTREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHVRAPLLKENGDNEASAEPGGRGPEESVEASSTSHTVEDCLHTKAIKRESSGLCQSSPGAQSSCSSEPSPLGSAPNNDSGVEMPGTGPGSLGDLTALDDPSPGADTSALAAPSTGGLQLRKHLTTMHRFEQLKREKLKSLKDSCSWAGPAPHTRNTKLPPLPANGSVLENFNNTGSGGPAGLLPSQRLPELTEVTMLSQLQERRDSSTSTMSSAYTVSRRSSGISPYFSSRRSSEASPLGGVRQHNASSADSYDPISTDASRRSSEASQCSGPGLLNLTPAQQYSLRAKYAAATGGPPPTPLPGLDRVSLRTRLALLDAPERALPGTCPHPLGPRRGSDGPTYSHGHGHGYVGAAPAFPHEGPNSSTRRASDPVRRPDPLILPRVQRFHSTHNMNPGSLPSCTDRRGLHVQSHPGVDGNLTRGAYSPRPPSINENVVMEAMAAGVDGTGLESDLGLVEDELVLPDDVVQYIKAHTGGTLDNSTRHVYPTEGTGFPENCKLPSPGLQGHRRVAAADSNVGPSGLGGCQLSYSPSSTLNKSNMPVQWNEVSSGTVDALPTQVKPPPFPQSNLAVVQQKPAFGQYPGYSPQSLQSSSGGLDSTQPHLQLRGAPSTSRGNYTQQPQQPTASGQCLGVAAAISPQASYSQAHPQLSPNIVNGSLNQFSPSCSNMAAKPSHLGLSPQMEVVPNATIMSGHQRELGIPNSSLAAVSQPHPVLSYPQQDSYQQGSNLLSSHQPSFMESQQNTGFGLMQPRPPLEPNTASRHRGARSGQQQLYARTVGQTMVTSANQETAEAMPKGTAGPMVSLAPQPSQDTGRSQDQNTLYYYGQIHMYEQNGGCPAMQPQPPQPRACSDNIQPEPLPSPGVNQVSSTVDSQLLEPPQIDFDAIMDDGDHSSLFSGALSPTLLHNLSQNSSRLTTPRNSLTLPSIPSGISNMAVGDMSSMLTSLAEENKFLNMMT
SIO_010081: Gli2
subclass of: SO_0000673
so part of: Gli2
location: complement(join(8587941..8590321,8591435..8591771,8593611..8593892,8595914..8596078,8597532..8597681,8600049..8600183,8604836..8604958,8605993..8606209,8607012..8607213,8617816..8618001,8618814..8619016,8641368..8641426))
location: region:8587941-8641426:-1
so has part: feature:8641368-8641426:-1:exon
so has part: feature:8618814-8619016:-1:exon
so has part: feature:8617816-8618001:-1:exon
so has part: feature:8607012-8607213:-1:exon
so has part: feature:8605993-8606209:-1:exon
so has part: feature:8604836-8604958:-1:exon
so has part: feature:8600049-8600183:-1:exon
so has part: feature:8597532-8597681:-1:exon
so has part: feature:8595914-8596078:-1:exon
so has part: feature:8593611-8593892:-1:exon
so has part: feature:8591435-8591771:-1:exon
so has part: feature:8587941-8590321:-1:exon

XP_034369493.1
type: Protein
SIO_000068: ncbiprotein

position:8587941:-1
position: 8587941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8641426:-1
position: 8641426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8641368-8641426:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8618814-8619016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8617816-8618001:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8607012-8607213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8605993-8606209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8604836-8604958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8600049-8600183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8597532-8597681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8595914-8596078:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8593611-8593892:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8591435-8591771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8587941-8590321:-1:exon

Inhbb
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Inhbb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9171993..9178953)
location: region:9171993-9178953:-1
so has part: feature:9171993-9178953:-1:exon
subclass of: SO_0000010

117716573
type: Gene
SIO_000068: ncbigene

position:9171993:-1
position: 9171993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9178953:-1
position: 9178953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9171993-9178953:-1:exon

Inhbb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Inhbb
product: inhibin subunit beta B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034513645.1
SIO_010081: Inhbb
subclass of: SO_0000673
so part of: Inhbb
location: complement(join(9171993..9174647,9177341..9178953))
location: region:9171993-9178953:-1
so has part: feature:9177341-9178953:-1:exon
so has part: feature:9171993-9174647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9177341-9178953:-1:exon

position:9177341:-1
position: 9177341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9171993-9174647:-1:exon

position:9174647:-1
position: 9174647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Inhbb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Inhbb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibin beta B chain
translation: MDGLPGRALGAACLLLLAAGWLGPEAWGSPTPPPSPAAPPPPPPPGAPGGSQDTCTSCGGGGGGFRRPEELGRVDGDFLEAVKRHILNRLQLRGRPNITHAVPKAAMVTALRKLHAGKVREDGRVEIPHLDGHASPGADGQERVSEIISFAETDGLASSRVRLYFFVSNEGNQNLFVVQASLWLYLKLLPYVLEKGSRRKVRVKVYFQEQGHGDRWNVVEKKVDLKRSGWHTFPITEAIQALFERGERRLNLDVQCDSCQELAVVPVFVDPGEESHRPFVVVQARLGDSRHRIRKRGLECDGRTSLCCRQQFFIDFRLIGWNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASSFHTAVVNQYRMRGLNPGPVNSCCIPTKLSSMSMLYFDDEYNIVKRDVPNMIVEECGCA
SIO_010081: Inhbb
subclass of: SO_0000673
so part of: Inhbb
location: complement(join(9173872..9174647,9177341..9177800))
location: region:9173872-9177800:-1
so has part: feature:9177341-9177800:-1:exon
so has part: feature:9173872-9174647:-1:exon

XP_034369536.1
type: Protein
SIO_000068: ncbiprotein

position:9173872:-1
position: 9173872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9177800:-1
position: 9177800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9177341-9177800:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9173872-9174647:-1:exon

Ralb
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ralb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9227465..9266228)
location: region:9227465-9266228:-1
so has part: feature:9227465-9266228:-1:exon
subclass of: SO_0000010

117716566
type: Gene
SIO_000068: ncbigene

position:9227465:-1
position: 9227465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9266228:-1
position: 9266228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9227465-9266228:-1:exon

Ralb
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ralb
product: RAS like proto-oncogene B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 long SRA reads, 14 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513634.1
SIO_010081: Ralb
subclass of: SO_0000673
so part of: Ralb
location: complement(join(9227465..9229080,9231712..9231889,9234862..9235070,9241800..9241962,9266020..9266228))
location: region:9227465-9266228:-1
so has part: feature:9266020-9266228:-1:exon
so has part: feature:9241800-9241962:-1:exon
so has part: feature:9234862-9235070:-1:exon
so has part: feature:9231712-9231889:-1:exon
so has part: feature:9227465-9229080:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9266020-9266228:-1:exon

position:9266020:-1
position: 9266020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9241800-9241962:-1:exon

position:9241800:-1
position: 9241800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9241962:-1
position: 9241962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9234862-9235070:-1:exon

position:9234862:-1
position: 9234862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9235070:-1
position: 9235070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9231712-9231889:-1:exon

position:9231712:-1
position: 9231712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9231889:-1
position: 9231889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9227465-9229080:-1:exon

position:9229080:-1
position: 9229080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ralb
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ralb
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Ral-B
translation: MAANKGRSQGSLVLHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEERRQVPVDEARGKAEEWGVQYVETSAKTRVNVDKVFFDLMREIRAKKMSENKDKNGRKSSKSKKSFKDRCCLL
SIO_010081: Ralb
subclass of: SO_0000673
so part of: Ralb
location: complement(join(9228961..9229080,9231712..9231889,9234862..9235070,9241800..9241913))
location: region:9228961-9241913:-1
so has part: feature:9241800-9241913:-1:exon
so has part: feature:9234862-9235070:-1:exon
so has part: feature:9231712-9231889:-1:exon
so has part: feature:9228961-9229080:-1:exon

XP_034369525.1
type: Protein
SIO_000068: ncbiprotein

position:9228961:-1
position: 9228961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9241913:-1
position: 9241913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9241800-9241913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9234862-9235070:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9231712-9231889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9228961-9229080:-1:exon

Tmem185b
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tmem185b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9288980..9291360
location: region:9288980-9291360:1
so has part: feature:9288980-9291360:1:exon
subclass of: SO_0000010

117716561
type: Gene
SIO_000068: ncbigene

position:9288980:1
position: 9288980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9291360:1
position: 9291360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9288980-9291360:1:exon

Tmem185b
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tmem185b
product: transmembrane protein 185B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 2 long SRA reads, 8 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513624.1
SIO_010081: Tmem185b
subclass of: SO_0000673
so part of: Tmem185b
location: 9288980..9291360
location: region:9288980-9291360:1
so has part: feature:9288980-9291360:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9288980-9291360:1:exon

Tmem185b
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tmem185b
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 185B
translation: MNPRGLFQDFNPSKFLIYACLLLFSVLLPLRLDGVIQWSYWAVFAPIWLWKLLVIVGASVGAGVWARNPRYRTEGEACVEFKAMLIAVGIHLLLLMFEILVCDRVERGTHFWLLVFMPLFFVSPVSVAACVWGFRHDRSLELEILCSVNILQFIFIALRLDRIIHWPWLVVFVPLWILMSFLCLVVLYYIVWSLLFLRSLDVVAEQRRTHVTMAISWITIVVPLLTFEVLLVHRLDDHNMFSYVSIFIPLWLSLLTLMATTFRRKGGNHWWFGIRRDFCQFLLEVFPFLREYGNISYDLHHEDSEDTEDVSMSEAPKIAPMFGKKARVVITQSPGKYIPPPPKLNIDMPD
SIO_010081: Tmem185b
subclass of: SO_0000673
so part of: Tmem185b
location: 9289628..9290680
location: region:9289628-9290680:1
so has part: feature:9289628-9290680:1:exon

XP_034369515.1
type: Protein
SIO_000068: ncbiprotein

position:9289628:1
position: 9289628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9290680:1
position: 9290680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9289628-9290680:1:exon

LOC117716698
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716698
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 9292732..9292838
location: region:9292732-9292838:1
so has part: feature:9292732-9292838:1:exon
subclass of: SO_0000623

117716698
type: Gene
SIO_000068: ncbigene

position:9292732:1
position: 9292732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9292838:1
position: 9292838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9292732-9292838:1:exon

LOC117716698
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117716698
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607796.1
SIO_010081: LOC117716698
subclass of: SO_0000673
so part of: LOC117716698
location: 9292732..9292838
location: region:9292732-9292838:1
so has part: feature:9292732-9292838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9292732-9292838:1:exon

Epb41l5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Epb41l5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9312989..9422119)
location: region:9312989-9422119:-1
so has part: feature:9312989-9422119:-1:exon
subclass of: SO_0000010

117716157
type: Gene
SIO_000068: ncbigene

position:9312989:-1
position: 9312989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9422119:-1
position: 9422119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9312989-9422119:-1:exon

Epb41l5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Epb41l5
product: erythrocyte membrane protein band 4.1 like 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 long SRA reads, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034513096.1
SIO_010081: Epb41l5
subclass of: SO_0000673
so part of: Epb41l5
location: complement(join(9312989..9316887,9317625..9317764,9318268..9318309,9321959..9322033,9324709..9324799,9336181..9336245,9341003..9341131,9344002..9344099,9348574..9348737,9370806..9370921,9372845..9372884,9378042..9378069,9380292..9380398,9381439..9381608,9386080..9386149,9387157..9387245,9388179..9388266,9388368..9388488,9391465..9391517,9391957..9392001,9393438..9393516,9395596..9395638,9407122..9407226,9416027..9416208,9421957..9422119))
location: region:9312989-9422119:-1
so has part: feature:9421957-9422119:-1:exon
so has part: feature:9416027-9416208:-1:exon
so has part: feature:9407122-9407226:-1:exon
so has part: feature:9395596-9395638:-1:exon
so has part: feature:9393438-9393516:-1:exon
so has part: feature:9391957-9392001:-1:exon
so has part: feature:9391465-9391517:-1:exon
so has part: feature:9388368-9388488:-1:exon
so has part: feature:9388179-9388266:-1:exon
so has part: feature:9387157-9387245:-1:exon
so has part: feature:9386080-9386149:-1:exon
so has part: feature:9381439-9381608:-1:exon
so has part: feature:9380292-9380398:-1:exon
so has part: feature:9378042-9378069:-1:exon
so has part: feature:9372845-9372884:-1:exon
so has part: feature:9370806-9370921:-1:exon
so has part: feature:9348574-9348737:-1:exon
so has part: feature:9344002-9344099:-1:exon
so has part: feature:9341003-9341131:-1:exon
so has part: feature:9336181-9336245:-1:exon
so has part: feature:9324709-9324799:-1:exon
so has part: feature:9321959-9322033:-1:exon
so has part: feature:9318268-9318309:-1:exon
so has part: feature:9317625-9317764:-1:exon
so has part: feature:9312989-9316887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9421957-9422119:-1:exon

position:9421957:-1
position: 9421957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9416027-9416208:-1:exon

position:9416027:-1
position: 9416027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9416208:-1
position: 9416208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9407122-9407226:-1:exon

position:9407122:-1
position: 9407122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9407226:-1
position: 9407226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9395596-9395638:-1:exon

position:9395596:-1
position: 9395596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9395638:-1
position: 9395638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9393438-9393516:-1:exon

position:9393438:-1
position: 9393438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9393516:-1
position: 9393516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9391957-9392001:-1:exon

position:9391957:-1
position: 9391957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9392001:-1
position: 9392001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9391465-9391517:-1:exon

position:9391465:-1
position: 9391465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9391517:-1
position: 9391517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9388368-9388488:-1:exon

position:9388368:-1
position: 9388368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9388488:-1
position: 9388488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9388179-9388266:-1:exon

position:9388179:-1
position: 9388179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9388266:-1
position: 9388266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9387157-9387245:-1:exon

position:9387157:-1
position: 9387157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9387245:-1
position: 9387245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9386080-9386149:-1:exon

position:9386080:-1
position: 9386080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9386149:-1
position: 9386149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9381439-9381608:-1:exon

position:9381439:-1
position: 9381439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9381608:-1
position: 9381608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9380292-9380398:-1:exon

position:9380292:-1
position: 9380292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9380398:-1
position: 9380398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9378042-9378069:-1:exon

position:9378042:-1
position: 9378042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9378069:-1
position: 9378069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9372845-9372884:-1:exon

position:9372845:-1
position: 9372845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9372884:-1
position: 9372884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9370806-9370921:-1:exon

position:9370806:-1
position: 9370806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9370921:-1
position: 9370921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9348574-9348737:-1:exon

position:9348574:-1
position: 9348574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9348737:-1
position: 9348737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9344002-9344099:-1:exon

position:9344002:-1
position: 9344002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9344099:-1
position: 9344099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9341003-9341131:-1:exon

position:9341003:-1
position: 9341003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9341131:-1
position: 9341131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9336181-9336245:-1:exon

position:9336181:-1
position: 9336181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9336245:-1
position: 9336245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9324709-9324799:-1:exon

position:9324709:-1
position: 9324709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9324799:-1
position: 9324799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9321959-9322033:-1:exon

position:9321959:-1
position: 9321959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9322033:-1
position: 9322033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9318268-9318309:-1:exon

position:9318268:-1
position: 9318268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9318309:-1
position: 9318309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9317625-9317764:-1:exon

position:9317625:-1
position: 9317625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9317764:-1
position: 9317764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:9312989-9316887:-1:exon

position:9316887:-1
position: 9316887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Epb41l5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Epb41l5
product: erythrocyte membrane protein band 4.1 like 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 long SRA read, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513098.1
SIO_010081: Epb41l5
subclass of: SO_0000673
so part of: Epb41l5
location: complement(join(9312989..9316887,9317625..9317761,9318268..9318309,9321959..9322033,9324709..9324799,9336181..9336245,9341003..9341131,9344002..9344099,9348574..9348737,9370806..9370921,9372845..9372884,9378042..9378069,9380292..9380398,9381439..9381608,9386080..9386149,9387157..9387245,9388179..9388266,9388368..9388488,9391465..9391517,9391957..9392001,9393438..9393516,9395596..9395638,9407122..9407226,9416027..9416208,9421957..9422014))
location: region:9312989-9422014:-1
so has part: feature:9421957-9422014:-1:exon
so has part: feature:9416027-9416208:-1:exon
so has part: feature:9407122-9407226:-1:exon
so has part: feature:9395596-9395638:-1:exon
so has part: feature:9393438-9393516:-1:exon
so has part: feature:9391957-9392001:-1:exon
so has part: feature:9391465-9391517:-1:exon
so has part: feature:9388368-9388488:-1:exon
so has part: feature:9388179-9388266:-1:exon
so has part: feature:9387157-9387245:-1:exon
so has part: feature:9386080-9386149:-1:exon
so has part: feature:9381439-9381608:-1:exon
so has part: feature:9380292-9380398:-1:exon
so has part: feature:9378042-9378069:-1:exon
so has part: feature:9372845-9372884:-1:exon
so has part: feature:9370806-9370921:-1:exon
so has part: feature:9348574-9348737:-1:exon
so has part: feature:9344002-9344099:-1:exon
so has part: feature:9341003-9341131:-1:exon
so has part: feature:9336181-9336245:-1:exon
so has part: feature:9324709-9324799:-1:exon
so has part: feature:9321959-9322033:-1:exon
so has part: feature:9318268-9318309:-1:exon
so has part: feature:9317625-9317761:-1:exon
so has part: feature:9312989-9316887:-1:exon

position:9422014:-1
position: 9422014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421957-9422014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9416027-9416208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9407122-9407226:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9395596-9395638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9393438-9393516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9391957-9392001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9391465-9391517:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9388368-9388488:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9388179-9388266:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9387157-9387245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9386080-9386149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9381439-9381608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9380292-9380398:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9378042-9378069:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9372845-9372884:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9370806-9370921:-1:exon

urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:9344002-9344099:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9341003-9341131:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9336181-9336245:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9324709-9324799:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9321959-9322033:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9318268-9318309:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9317625-9317761:-1:exon

position:9317761:-1
position: 9317761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:9312989-9316887:-1:exon

Epb41l5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Epb41l5
product: erythrocyte membrane protein band 4.1 like 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034513097.1
SIO_010081: Epb41l5
subclass of: SO_0000673
so part of: Epb41l5
location: complement(join(9312989..9316887,9317625..9317764,9318268..9318309,9321959..9322033,9324709..9324799,9336181..9336245,9341003..9341131,9344002..9344099,9348574..9348737,9370806..9370921,9372845..9372884,9378042..9378069,9380292..9380398,9381439..9381608,9386080..9386149,9387157..9387245,9388179..9388266,9388368..9388488,9391465..9391517,9391957..9392001,9393438..9393516,9395596..9395638,9407122..9407226,9416027..9416208,9421595..9421642))
location: region:9312989-9421642:-1
so has part: feature:9421595-9421642:-1:exon
so has part: feature:9416027-9416208:-1:exon
so has part: feature:9407122-9407226:-1:exon
so has part: feature:9395596-9395638:-1:exon
so has part: feature:9393438-9393516:-1:exon
so has part: feature:9391957-9392001:-1:exon
so has part: feature:9391465-9391517:-1:exon
so has part: feature:9388368-9388488:-1:exon
so has part: feature:9388179-9388266:-1:exon
so has part: feature:9387157-9387245:-1:exon
so has part: feature:9386080-9386149:-1:exon
so has part: feature:9381439-9381608:-1:exon
so has part: feature:9380292-9380398:-1:exon
so has part: feature:9378042-9378069:-1:exon
so has part: feature:9372845-9372884:-1:exon
so has part: feature:9370806-9370921:-1:exon
so has part: feature:9348574-9348737:-1:exon
so has part: feature:9344002-9344099:-1:exon
so has part: feature:9341003-9341131:-1:exon
so has part: feature:9336181-9336245:-1:exon
so has part: feature:9324709-9324799:-1:exon
so has part: feature:9321959-9322033:-1:exon
so has part: feature:9318268-9318309:-1:exon
so has part: feature:9317625-9317764:-1:exon
so has part: feature:9312989-9316887:-1:exon

position:9421642:-1
position: 9421642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421595-9421642:-1:exon

position:9421595:-1
position: 9421595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9416027-9416208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9407122-9407226:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9395596-9395638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9393438-9393516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9391957-9392001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9391465-9391517:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9388368-9388488:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9388179-9388266:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9387157-9387245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9386080-9386149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9381439-9381608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9380292-9380398:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9378042-9378069:-1:exon

urn:…
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SIO_000628: feature:9372845-9372884:-1:exon

urn:…
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SIO_000628: feature:9370806-9370921:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9348574-9348737:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9344002-9344099:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9341003-9341131:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9336181-9336245:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9324709-9324799:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9321959-9322033:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9318268-9318309:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9317625-9317764:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9312989-9316887:-1:exon

Epb41l5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Epb41l5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 5 isoform X2
translation: MLSFLRRTLGRRSMRKHAEKERLREAQRAATHIPAAGDAKSIITCRVSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLDGTKSIKKQVKIGSPYCLHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLECPFDTAVQLAAYNLQAELGDYDLAEHSPELVSEFRFVPIQTEEMELAIFEKWKEYRGQTPAQAETNYLNKAKWLEMYGVDMHVVKARDGNDYSLGLTPTGVLVFEGETKIGLFFWPKITRLDFKKNKLTLVVVEDDDQGKEQEHTFVFRLDHPKACKHLWKCAVEHHAFFRLRGPVQKGSHRSGFIRLGSRFRYSGKTEYQTTKTNKARRSTSFERRPSKRYSRRTLQMKASTTKPEALGVHNASAQNSDSEQAWGVRSPVPATSSSSSGPVLVEIESLPQNSAADQHNRKCLPLSSDLLSSPDLLETTIGDVTRTSETSEPFPAPDDINVATRSQELEELKVECETLKDDTEKLKQLETEQSILPSLRPAIDINVHSQEEVVKLTEKCLNNAIESPGGNAVRVPPDFKSNILKAQVEAVHKATREDSLLTHKNATVQDAATNSTVFSENDVPVCKDSLTPVHATAADSDSVLKDATDELDALLLSLTENLMDHTVTPQASSSSMITPRWIIPSATISTISNGLAGYGAALAGRDGCGQKDGFSLISAPAPFLVDAVTSSVPPLPEDSALKQKCLLTTEL
SIO_010081: Epb41l5
subclass of: SO_0000673
so part of: Epb41l5
location: complement(join(9316821..9316887,9317625..9317761,9318268..9318309,9321959..9322033,9324709..9324799,9336181..9336245,9341003..9341131,9344002..9344099,9348574..9348737,9370806..9370921,9372845..9372884,9378042..9378069,9380292..9380398,9381439..9381608,9386080..9386149,9387157..9387245,9388179..9388266,9388368..9388488,9391465..9391517,9391957..9392001,9393438..9393516,9395596..9395638,9407122..9407226,9416027..9416206))
location: region:9316821-9416206:-1
so has part: feature:9416027-9416206:-1:exon
so has part: feature:9407122-9407226:-1:exon
so has part: feature:9395596-9395638:-1:exon
so has part: feature:9393438-9393516:-1:exon
so has part: feature:9391957-9392001:-1:exon
so has part: feature:9391465-9391517:-1:exon
so has part: feature:9388368-9388488:-1:exon
so has part: feature:9388179-9388266:-1:exon
so has part: feature:9387157-9387245:-1:exon
so has part: feature:9386080-9386149:-1:exon
so has part: feature:9381439-9381608:-1:exon
so has part: feature:9380292-9380398:-1:exon
so has part: feature:9378042-9378069:-1:exon
so has part: feature:9372845-9372884:-1:exon
so has part: feature:9370806-9370921:-1:exon
so has part: feature:9348574-9348737:-1:exon
so has part: feature:9344002-9344099:-1:exon
so has part: feature:9341003-9341131:-1:exon
so has part: feature:9336181-9336245:-1:exon
so has part: feature:9324709-9324799:-1:exon
so has part: feature:9321959-9322033:-1:exon
so has part: feature:9318268-9318309:-1:exon
so has part: feature:9317625-9317761:-1:exon
so has part: feature:9316821-9316887:-1:exon

XP_034368989.1
type: Protein
SIO_000068: ncbiprotein

position:9316821:-1
position: 9316821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9416206:-1
position: 9416206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9416027-9416206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9407122-9407226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9395596-9395638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9393438-9393516:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9391957-9392001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9391465-9391517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9388368-9388488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9388179-9388266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9387157-9387245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9386080-9386149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9381439-9381608:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9380292-9380398:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9378042-9378069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9372845-9372884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9370806-9370921:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9348574-9348737:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9344002-9344099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9341003-9341131:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9336181-9336245:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9324709-9324799:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9321959-9322033:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9318268-9318309:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9317625-9317761:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9316821-9316887:-1:exon

Epb41l5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Epb41l5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 5 isoform X1
translation: MLSFLRRTLGRRSMRKHAEKERLREAQRAATHIPAAGDAKSIITCRVSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLDGTKSIKKQVKIGSPYCLHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLECPFDTAVQLAAYNLQAELGDYDLAEHSPELVSEFRFVPIQTEEMELAIFEKWKEYRGQTPAQAETNYLNKAKWLEMYGVDMHVVKARDGNDYSLGLTPTGVLVFEGETKIGLFFWPKITRLDFKKNKLTLVVVEDDDQGKEQEHTFVFRLDHPKACKHLWKCAVEHHAFFRLRGPVQKGSHRSGFIRLGSRFRYSGKTEYQTTKTNKARRSTSFERRPSKRYSRRTLQMKASTTKPEALGVHNASAQNSDSEQAWGVRSPVPATSSSSSGPVLVEIESLPQNSAADQHNRKCLPLSSDLLSSPDLLETTIGDVTRTSETSEPFPAPDDINVATRSQELEELKVECETLKDDTEKLKQLETEQSILPSLRPAIDINVHSQEEVVKLTEKCLNNAIESPGGNAVRVPPDFKSNILKAQVEAVHKATREDSLLTHKNATVQDAATNSTVFSENDVPVCKDSLTPVHATAADSDSVLKDATDELDALLLSLTENLMDHTVTPQASSSSMITPRWIIPQSATISTISNGLAGYGAALAGRDGCGQKDGFSLISAPAPFLVDAVTSSVPPLPEDSALKQKCLLTTEL
SIO_010081: Epb41l5
subclass of: SO_0000673
so part of: Epb41l5
location: complement(join(9316821..9316887,9317625..9317764,9318268..9318309,9321959..9322033,9324709..9324799,9336181..9336245,9341003..9341131,9344002..9344099,9348574..9348737,9370806..9370921,9372845..9372884,9378042..9378069,9380292..9380398,9381439..9381608,9386080..9386149,9387157..9387245,9388179..9388266,9388368..9388488,9391465..9391517,9391957..9392001,9393438..9393516,9395596..9395638,9407122..9407226,9416027..9416206))
location: region:9316821-9416206:-1
so has part: feature:9416027-9416206:-1:exon
so has part: feature:9407122-9407226:-1:exon
so has part: feature:9395596-9395638:-1:exon
so has part: feature:9393438-9393516:-1:exon
so has part: feature:9391957-9392001:-1:exon
so has part: feature:9391465-9391517:-1:exon
so has part: feature:9388368-9388488:-1:exon
so has part: feature:9388179-9388266:-1:exon
so has part: feature:9387157-9387245:-1:exon
so has part: feature:9386080-9386149:-1:exon
so has part: feature:9381439-9381608:-1:exon
so has part: feature:9380292-9380398:-1:exon
so has part: feature:9378042-9378069:-1:exon
so has part: feature:9372845-9372884:-1:exon
so has part: feature:9370806-9370921:-1:exon
so has part: feature:9348574-9348737:-1:exon
so has part: feature:9344002-9344099:-1:exon
so has part: feature:9341003-9341131:-1:exon
so has part: feature:9336181-9336245:-1:exon
so has part: feature:9324709-9324799:-1:exon
so has part: feature:9321959-9322033:-1:exon
so has part: feature:9318268-9318309:-1:exon
so has part: feature:9317625-9317764:-1:exon
so has part: feature:9316821-9316887:-1:exon

XP_034368987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9416027-9416206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9407122-9407226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9395596-9395638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9393438-9393516:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9391957-9392001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9391465-9391517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9388368-9388488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9388179-9388266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9387157-9387245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9386080-9386149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9381439-9381608:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9380292-9380398:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9378042-9378069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9372845-9372884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9370806-9370921:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9348574-9348737:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9344002-9344099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9341003-9341131:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9336181-9336245:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9324709-9324799:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9321959-9322033:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9318268-9318309:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9317625-9317764:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9316821-9316887:-1:exon

Epb41l5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Epb41l5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 5 isoform X1
translation: MLSFLRRTLGRRSMRKHAEKERLREAQRAATHIPAAGDAKSIITCRVSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLDGTKSIKKQVKIGSPYCLHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLECPFDTAVQLAAYNLQAELGDYDLAEHSPELVSEFRFVPIQTEEMELAIFEKWKEYRGQTPAQAETNYLNKAKWLEMYGVDMHVVKARDGNDYSLGLTPTGVLVFEGETKIGLFFWPKITRLDFKKNKLTLVVVEDDDQGKEQEHTFVFRLDHPKACKHLWKCAVEHHAFFRLRGPVQKGSHRSGFIRLGSRFRYSGKTEYQTTKTNKARRSTSFERRPSKRYSRRTLQMKASTTKPEALGVHNASAQNSDSEQAWGVRSPVPATSSSSSGPVLVEIESLPQNSAADQHNRKCLPLSSDLLSSPDLLETTIGDVTRTSETSEPFPAPDDINVATRSQELEELKVECETLKDDTEKLKQLETEQSILPSLRPAIDINVHSQEEVVKLTEKCLNNAIESPGGNAVRVPPDFKSNILKAQVEAVHKATREDSLLTHKNATVQDAATNSTVFSENDVPVCKDSLTPVHATAADSDSVLKDATDELDALLLSLTENLMDHTVTPQASSSSMITPRWIIPQSATISTISNGLAGYGAALAGRDGCGQKDGFSLISAPAPFLVDAVTSSVPPLPEDSALKQKCLLTTEL
SIO_010081: Epb41l5
subclass of: SO_0000673
so part of: Epb41l5
location: complement(join(9316821..9316887,9317625..9317764,9318268..9318309,9321959..9322033,9324709..9324799,9336181..9336245,9341003..9341131,9344002..9344099,9348574..9348737,9370806..9370921,9372845..9372884,9378042..9378069,9380292..9380398,9381439..9381608,9386080..9386149,9387157..9387245,9388179..9388266,9388368..9388488,9391465..9391517,9391957..9392001,9393438..9393516,9395596..9395638,9407122..9407226,9416027..9416206))
location: region:9316821-9416206:-1
so has part: feature:9416027-9416206:-1:exon
so has part: feature:9407122-9407226:-1:exon
so has part: feature:9395596-9395638:-1:exon
so has part: feature:9393438-9393516:-1:exon
so has part: feature:9391957-9392001:-1:exon
so has part: feature:9391465-9391517:-1:exon
so has part: feature:9388368-9388488:-1:exon
so has part: feature:9388179-9388266:-1:exon
so has part: feature:9387157-9387245:-1:exon
so has part: feature:9386080-9386149:-1:exon
so has part: feature:9381439-9381608:-1:exon
so has part: feature:9380292-9380398:-1:exon
so has part: feature:9378042-9378069:-1:exon
so has part: feature:9372845-9372884:-1:exon
so has part: feature:9370806-9370921:-1:exon
so has part: feature:9348574-9348737:-1:exon
so has part: feature:9344002-9344099:-1:exon
so has part: feature:9341003-9341131:-1:exon
so has part: feature:9336181-9336245:-1:exon
so has part: feature:9324709-9324799:-1:exon
so has part: feature:9321959-9322033:-1:exon
so has part: feature:9318268-9318309:-1:exon
so has part: feature:9317625-9317764:-1:exon
so has part: feature:9316821-9316887:-1:exon

XP_034368988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9416027-9416206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9407122-9407226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9395596-9395638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9393438-9393516:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9391957-9392001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9391465-9391517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9388368-9388488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9388179-9388266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9387157-9387245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9386080-9386149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9381439-9381608:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9380292-9380398:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9378042-9378069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9372845-9372884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9370806-9370921:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9348574-9348737:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9344002-9344099:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9341003-9341131:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9336181-9336245:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9324709-9324799:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9321959-9322033:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9318268-9318309:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9317625-9317764:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9316821-9316887:-1:exon

Epb41l5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Epb41l5
product: erythrocyte membrane protein band 4.1 like 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034513099.1
SIO_010081: Epb41l5
subclass of: SO_0000673
so part of: Epb41l5
location: complement(join(9366933..9367661,9370806..9370921,9372845..9372884,9378042..9378069,9380292..9380398,9381439..9381608,9386080..9386149,9387157..9387245,9388179..9388266,9388368..9388488,9391465..9391517,9391957..9392001,9393438..9393516,9395596..9395638,9407122..9407226,9416027..9416208,9421957..9422014))
location: region:9366933-9422014:-1
so has part: feature:9421957-9422014:-1:exon
so has part: feature:9416027-9416208:-1:exon
so has part: feature:9407122-9407226:-1:exon
so has part: feature:9395596-9395638:-1:exon
so has part: feature:9393438-9393516:-1:exon
so has part: feature:9391957-9392001:-1:exon
so has part: feature:9391465-9391517:-1:exon
so has part: feature:9388368-9388488:-1:exon
so has part: feature:9388179-9388266:-1:exon
so has part: feature:9387157-9387245:-1:exon
so has part: feature:9386080-9386149:-1:exon
so has part: feature:9381439-9381608:-1:exon
so has part: feature:9380292-9380398:-1:exon
so has part: feature:9378042-9378069:-1:exon
so has part: feature:9372845-9372884:-1:exon
so has part: feature:9370806-9370921:-1:exon
so has part: feature:9366933-9367661:-1:exon

position:9366933:-1
position: 9366933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9421957-9422014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9416027-9416208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9407122-9407226:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9395596-9395638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9393438-9393516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9391957-9392001:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9391465-9391517:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9388368-9388488:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9388179-9388266:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9387157-9387245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9386080-9386149:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9381439-9381608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9380292-9380398:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9378042-9378069:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9372845-9372884:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9370806-9370921:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9366933-9367661:-1:exon

position:9367661:-1
position: 9367661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Epb41l5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Epb41l5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 5 isoform X3
translation: MLSFLRRTLGRRSMRKHAEKERLREAQRAATHIPAAGDAKSIITCRVSLLDGTDVSVDLPKKAKGQELFDQIMYHLDLIESDYFGLRFMDSAQVAHWLDGTKSIKKQVKIGSPYCLHLRVKFYSSEPNNLREELTRYLFVLQLKQDILSGKLECPFDTAVQLAAYNLQAELGDYDLAEHSPELVSEFRFVPIQTEEMELAIFEKWKEYRGQTPAQAETNYLNKAKWLEMYGVDMHVVKARDGNDYSLGLTPTGVLVFEGETKIGLFFWPKITRLDFKKNKLTLVVVEDDDQGKEQEHTFVFRLDHPKACKHLWKCAVEHHAFFRLRGPVQKGSHRSGFIRLGSRFRYSGKTEYQTTKTNKARRSTSFERRPSKRYSRRTLQMKASTTKPEALGVHNASAQNSDSEQAWGVRSPVPATSSSSSGPVLVEIESLPQNSAADQHNRKWLSATSDRCQRGGNQWNPRALPPPQTAYRNYTDFVHEHNVKNAGAHHDARLSGRAAMTEI
SIO_010081: Epb41l5
subclass of: SO_0000673
so part of: Epb41l5
location: complement(join(9367481..9367661,9370806..9370921,9372845..9372884,9378042..9378069,9380292..9380398,9381439..9381608,9386080..9386149,9387157..9387245,9388179..9388266,9388368..9388488,9391465..9391517,9391957..9392001,9393438..9393516,9395596..9395638,9407122..9407226,9416027..9416206))
location: region:9367481-9416206:-1
so has part: feature:9416027-9416206:-1:exon
so has part: feature:9407122-9407226:-1:exon
so has part: feature:9395596-9395638:-1:exon
so has part: feature:9393438-9393516:-1:exon
so has part: feature:9391957-9392001:-1:exon
so has part: feature:9391465-9391517:-1:exon
so has part: feature:9388368-9388488:-1:exon
so has part: feature:9388179-9388266:-1:exon
so has part: feature:9387157-9387245:-1:exon
so has part: feature:9386080-9386149:-1:exon
so has part: feature:9381439-9381608:-1:exon
so has part: feature:9380292-9380398:-1:exon
so has part: feature:9378042-9378069:-1:exon
so has part: feature:9372845-9372884:-1:exon
so has part: feature:9370806-9370921:-1:exon
so has part: feature:9367481-9367661:-1:exon

XP_034368990.1
type: Protein
SIO_000068: ncbiprotein

position:9367481:-1
position: 9367481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9416027-9416206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9407122-9407226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9395596-9395638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9393438-9393516:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9391957-9392001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9391465-9391517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9388368-9388488:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9388179-9388266:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9387157-9387245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9386080-9386149:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9381439-9381608:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9380292-9380398:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9378042-9378069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9372845-9372884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9370806-9370921:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9367481-9367661:-1:exon

LOC117716435
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9420699..9422328
location: region:9420699-9422328:1
so has part: feature:9420699-9422328:1:exon
subclass of: SO_0000010

117716435
type: Gene
SIO_000068: ncbigene

position:9420699:1
position: 9420699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9422328:1
position: 9422328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9420699-9422328:1:exon

LOC117716435
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716435
product: uncharacterized LOC117716435
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 26% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513484.1
SIO_010081: LOC117716435
subclass of: SO_0000673
so part of: LOC117716435
location: join(9420699..9420702,9421738..9422328)
location: region:9420699-9422328:1
so has part: feature:9420699-9420702:1:exon
so has part: feature:9421738-9422328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9420699-9420702:1:exon

position:9420702:1
position: 9420702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9421738-9422328:1:exon

position:9421738:1
position: 9421738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117716435
translation: MKFLPRLAGPRQRARPSAATARYRPKLSAQPHWPSPPLPSQPAASPGEPGRPPGTVESLRSWSRANWRPGAKLLPVLGGEHPEATETTLTGARDPRREKPSRLEEKMGLQRRGEMAAQGVSPPCANPRRTPAARGHAP
SIO_010081: LOC117716435
subclass of: SO_0000673
so part of: LOC117716435
location: join(9420699..9420702,9421738..9422150)
location: region:9420699-9422150:1
so has part: feature:9420699-9420702:1:exon
so has part: feature:9421738-9422150:1:exon

XP_034369375.1
type: Protein
SIO_000068: ncbiprotein

position:9422150:1
position: 9422150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9420699-9420702:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9421738-9422150:1:exon

Ptpn4
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ptpn4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9426128..9590824)
location: region:9426128-9590824:-1
so has part: feature:9426128-9590824:-1:exon
subclass of: SO_0000010

117716156
type: Gene
SIO_000068: ncbigene

position:9426128:-1
position: 9426128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9590824:-1
position: 9590824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9426128-9590824:-1:exon

Ptpn4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ptpn4
product: protein tyrosine phosphatase non-receptor type 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 8 long SRA reads, 17 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034513093.1
SIO_010081: Ptpn4
subclass of: SO_0000673
so part of: Ptpn4
location: complement(join(9426128..9433147,9445878..9446013,9452978..9453126,9456367..9456495,9458960..9459106,9461475..9461536,9461692..9461782,9463244..9463410,9465778..9465934,9468532..9468588,9468676..9468759,9470153..9470312,9479684..9479842,9481291..9481416,9487092..9487160,9496526..9496698,9500632..9500695,9516151..9516239,9520495..9520582,9529016..9529136,9529410..9529462,9529863..9529907,9534827..9534905,9535003..9535045,9545403..9545510,9561124..9561278,9590313..9590824))
location: region:9426128-9590824:-1
so has part: feature:9590313-9590824:-1:exon
so has part: feature:9561124-9561278:-1:exon
so has part: feature:9545403-9545510:-1:exon
so has part: feature:9535003-9535045:-1:exon
so has part: feature:9534827-9534905:-1:exon
so has part: feature:9529863-9529907:-1:exon
so has part: feature:9529410-9529462:-1:exon
so has part: feature:9529016-9529136:-1:exon
so has part: feature:9520495-9520582:-1:exon
so has part: feature:9516151-9516239:-1:exon
so has part: feature:9500632-9500695:-1:exon
so has part: feature:9496526-9496698:-1:exon
so has part: feature:9487092-9487160:-1:exon
so has part: feature:9481291-9481416:-1:exon
so has part: feature:9479684-9479842:-1:exon
so has part: feature:9470153-9470312:-1:exon
so has part: feature:9468676-9468759:-1:exon
so has part: feature:9468532-9468588:-1:exon
so has part: feature:9465778-9465934:-1:exon
so has part: feature:9463244-9463410:-1:exon
so has part: feature:9461692-9461782:-1:exon
so has part: feature:9461475-9461536:-1:exon
so has part: feature:9458960-9459106:-1:exon
so has part: feature:9456367-9456495:-1:exon
so has part: feature:9452978-9453126:-1:exon
so has part: feature:9445878-9446013:-1:exon
so has part: feature:9426128-9433147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9590313-9590824:-1:exon

position:9590313:-1
position: 9590313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9561124-9561278:-1:exon

position:9561124:-1
position: 9561124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9561278:-1
position: 9561278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9545403-9545510:-1:exon

position:9545403:-1
position: 9545403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9545510:-1
position: 9545510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9535003-9535045:-1:exon

position:9535003:-1
position: 9535003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9535045:-1
position: 9535045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9534827-9534905:-1:exon

position:9534827:-1
position: 9534827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9534905:-1
position: 9534905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9529863-9529907:-1:exon

position:9529863:-1
position: 9529863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9529907:-1
position: 9529907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9529410-9529462:-1:exon

position:9529410:-1
position: 9529410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9529462:-1
position: 9529462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9529016-9529136:-1:exon

position:9529016:-1
position: 9529016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9529136:-1
position: 9529136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9520495-9520582:-1:exon

position:9520495:-1
position: 9520495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9520582:-1
position: 9520582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9516151-9516239:-1:exon

position:9516151:-1
position: 9516151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9516239:-1
position: 9516239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9500632-9500695:-1:exon

position:9500632:-1
position: 9500632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9500695:-1
position: 9500695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9496526-9496698:-1:exon

position:9496526:-1
position: 9496526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9496698:-1
position: 9496698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9487092-9487160:-1:exon

position:9487092:-1
position: 9487092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9487160:-1
position: 9487160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9481291-9481416:-1:exon

position:9481291:-1
position: 9481291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9481416:-1
position: 9481416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9479684-9479842:-1:exon

position:9479684:-1
position: 9479684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9479842:-1
position: 9479842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9470153-9470312:-1:exon

position:9470153:-1
position: 9470153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9470312:-1
position: 9470312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9468676-9468759:-1:exon

position:9468676:-1
position: 9468676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9468759:-1
position: 9468759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9468532-9468588:-1:exon

position:9468532:-1
position: 9468532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9468588:-1
position: 9468588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9465778-9465934:-1:exon

position:9465778:-1
position: 9465778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9465934:-1
position: 9465934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9463244-9463410:-1:exon

position:9463244:-1
position: 9463244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9463410:-1
position: 9463410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9461692-9461782:-1:exon

position:9461692:-1
position: 9461692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9461782:-1
position: 9461782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9461475-9461536:-1:exon

position:9461475:-1
position: 9461475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9461536:-1
position: 9461536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9458960-9459106:-1:exon

position:9458960:-1
position: 9458960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9459106:-1
position: 9459106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9456367-9456495:-1:exon

position:9456367:-1
position: 9456367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9456495:-1
position: 9456495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:9452978-9453126:-1:exon

position:9452978:-1
position: 9452978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9453126:-1
position: 9453126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:9445878-9446013:-1:exon

position:9445878:-1
position: 9445878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9446013:-1
position: 9446013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:9426128-9433147:-1:exon

position:9433147:-1
position: 9433147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ptpn4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ptpn4
product: protein tyrosine phosphatase non-receptor type 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 7 long SRA reads, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034513095.1
SIO_010081: Ptpn4
subclass of: SO_0000673
so part of: Ptpn4
location: complement(join(9426128..9433147,9445878..9446013,9452978..9453126,9456367..9456495,9458960..9459106,9461475..9461536,9461692..9461782,9463244..9463410,9465778..9465934,9468532..9468588,9468676..9468759,9470153..9470312,9479684..9479842,9481291..9481416,9487092..9487160,9496526..9496698,9500632..9500695,9516151..9516239,9520495..9520582,9529016..9529136,9529410..9529462,9529863..9529907,9534827..9534905,9535003..9535045,9545403..9545510,9561124..9561283,9590313..9590413))
location: region:9426128-9590413:-1
so has part: feature:9590313-9590413:-1:exon
so has part: feature:9561124-9561283:-1:exon
so has part: feature:9545403-9545510:-1:exon
so has part: feature:9535003-9535045:-1:exon
so has part: feature:9534827-9534905:-1:exon
so has part: feature:9529863-9529907:-1:exon
so has part: feature:9529410-9529462:-1:exon
so has part: feature:9529016-9529136:-1:exon
so has part: feature:9520495-9520582:-1:exon
so has part: feature:9516151-9516239:-1:exon
so has part: feature:9500632-9500695:-1:exon
so has part: feature:9496526-9496698:-1:exon
so has part: feature:9487092-9487160:-1:exon
so has part: feature:9481291-9481416:-1:exon
so has part: feature:9479684-9479842:-1:exon
so has part: feature:9470153-9470312:-1:exon
so has part: feature:9468676-9468759:-1:exon
so has part: feature:9468532-9468588:-1:exon
so has part: feature:9465778-9465934:-1:exon
so has part: feature:9463244-9463410:-1:exon
so has part: feature:9461692-9461782:-1:exon
so has part: feature:9461475-9461536:-1:exon
so has part: feature:9458960-9459106:-1:exon
so has part: feature:9456367-9456495:-1:exon
so has part: feature:9452978-9453126:-1:exon
so has part: feature:9445878-9446013:-1:exon
so has part: feature:9426128-9433147:-1:exon

position:9590413:-1
position: 9590413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9590313-9590413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9561124-9561283:-1:exon

position:9561283:-1
position: 9561283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9545403-9545510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9535003-9535045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9534827-9534905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9529863-9529907:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9529410-9529462:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9529016-9529136:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9520495-9520582:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9516151-9516239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9500632-9500695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9496526-9496698:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9487092-9487160:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9481291-9481416:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9479684-9479842:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9470153-9470312:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9468676-9468759:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9468532-9468588:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9465778-9465934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9463244-9463410:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9461692-9461782:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9461475-9461536:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9458960-9459106:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9456367-9456495:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9452978-9453126:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9445878-9446013:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9426128-9433147:-1:exon

Ptpn4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ptpn4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 4
translation: MTARFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFRVNKHDQGQVLLDIVFKHLDLTERDYFGLQLADDSTDNPRWLDPNKPIRKQLKRGSPYNLNFRVKFFVSDPNKLQEEYTRYQYFLQIKQDILTGRLSCPCNTAALLASFAVQSELGDYNQSENLAGYLSDYSFIPNQPQDFEKEIAKLHQQHIGLSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEILIGVMSGGILIYKNRVRMNTFLWLKIVKISFKCKQFFIQLRKELHESRETLLGFNMVNYRACKTLWKACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKFRYCGRTEVQSVQYGKEKANKDRVFARSPSKPLARKLMDWEVASRNSLSDDRLETQSLPSRSPPGTPNHRNSSFTQEGTRVRPSSVGHLVDHVVHTSPSEDFVSQRSPSSTQANSIVLESSPSQESPEDGQPPALPPKQSKKHSWNQIHFSQSQQDLASHTNESFDVPSSPEKSTPNGGIPHDNLVLIKMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCEKHSGELVLLVRPNAVYDVVEEKLESEPDFQYIPEKAPLDGVHHDDHSLRESMIELAEGLITGIVLAQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVLLKGNEDYINANYINMEIPSSSIINQYIACQGPLPHTCKDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPSGSSSYGCYQVTCHSEEGNPAYIFRKMTLFNQEKNESRQLTQIQYTAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPIIVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEEGFVKPLTTSSNK
SIO_010081: Ptpn4
subclass of: SO_0000673
so part of: Ptpn4
location: complement(join(9433061..9433147,9445878..9446013,9452978..9453126,9456367..9456495,9458960..9459106,9461475..9461536,9461692..9461782,9463244..9463410,9465778..9465934,9468532..9468588,9468676..9468759,9470153..9470312,9479684..9479842,9481291..9481416,9487092..9487160,9496526..9496698,9500632..9500695,9516151..9516239,9520495..9520582,9529016..9529136,9529410..9529462,9529863..9529907,9534827..9534905,9535003..9535045,9545403..9545510,9561124..9561261))
location: region:9433061-9561261:-1
so has part: feature:9561124-9561261:-1:exon
so has part: feature:9545403-9545510:-1:exon
so has part: feature:9535003-9535045:-1:exon
so has part: feature:9534827-9534905:-1:exon
so has part: feature:9529863-9529907:-1:exon
so has part: feature:9529410-9529462:-1:exon
so has part: feature:9529016-9529136:-1:exon
so has part: feature:9520495-9520582:-1:exon
so has part: feature:9516151-9516239:-1:exon
so has part: feature:9500632-9500695:-1:exon
so has part: feature:9496526-9496698:-1:exon
so has part: feature:9487092-9487160:-1:exon
so has part: feature:9481291-9481416:-1:exon
so has part: feature:9479684-9479842:-1:exon
so has part: feature:9470153-9470312:-1:exon
so has part: feature:9468676-9468759:-1:exon
so has part: feature:9468532-9468588:-1:exon
so has part: feature:9465778-9465934:-1:exon
so has part: feature:9463244-9463410:-1:exon
so has part: feature:9461692-9461782:-1:exon
so has part: feature:9461475-9461536:-1:exon
so has part: feature:9458960-9459106:-1:exon
so has part: feature:9456367-9456495:-1:exon
so has part: feature:9452978-9453126:-1:exon
so has part: feature:9445878-9446013:-1:exon
so has part: feature:9433061-9433147:-1:exon

XP_034368984.1
type: Protein
SIO_000068: ncbiprotein

position:9433061:-1
position: 9433061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9561261:-1
position: 9561261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9561124-9561261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9545403-9545510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9535003-9535045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9534827-9534905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9529863-9529907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9529410-9529462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9529016-9529136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9520495-9520582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9516151-9516239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9500632-9500695:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9496526-9496698:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9487092-9487160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9481291-9481416:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9479684-9479842:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9470153-9470312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9468676-9468759:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9468532-9468588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9465778-9465934:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9463244-9463410:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9461692-9461782:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9461475-9461536:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9458960-9459106:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9456367-9456495:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9452978-9453126:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9445878-9446013:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9433061-9433147:-1:exon

Ptpn4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ptpn4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 4
translation: MTARFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFRVNKHDQGQVLLDIVFKHLDLTERDYFGLQLADDSTDNPRWLDPNKPIRKQLKRGSPYNLNFRVKFFVSDPNKLQEEYTRYQYFLQIKQDILTGRLSCPCNTAALLASFAVQSELGDYNQSENLAGYLSDYSFIPNQPQDFEKEIAKLHQQHIGLSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEILIGVMSGGILIYKNRVRMNTFLWLKIVKISFKCKQFFIQLRKELHESRETLLGFNMVNYRACKTLWKACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKFRYCGRTEVQSVQYGKEKANKDRVFARSPSKPLARKLMDWEVASRNSLSDDRLETQSLPSRSPPGTPNHRNSSFTQEGTRVRPSSVGHLVDHVVHTSPSEDFVSQRSPSSTQANSIVLESSPSQESPEDGQPPALPPKQSKKHSWNQIHFSQSQQDLASHTNESFDVPSSPEKSTPNGGIPHDNLVLIKMKPDENGRFGFNVKGGYDQKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCEKHSGELVLLVRPNAVYDVVEEKLESEPDFQYIPEKAPLDGVHHDDHSLRESMIELAEGLITGIVLAQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVLLKGNEDYINANYINMEIPSSSIINQYIACQGPLPHTCKDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPEPSGSSSYGCYQVTCHSEEGNPAYIFRKMTLFNQEKNESRQLTQIQYTAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPIIVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFVCEAILKVYEEGFVKPLTTSSNK
SIO_010081: Ptpn4
subclass of: SO_0000673
so part of: Ptpn4
location: complement(join(9433061..9433147,9445878..9446013,9452978..9453126,9456367..9456495,9458960..9459106,9461475..9461536,9461692..9461782,9463244..9463410,9465778..9465934,9468532..9468588,9468676..9468759,9470153..9470312,9479684..9479842,9481291..9481416,9487092..9487160,9496526..9496698,9500632..9500695,9516151..9516239,9520495..9520582,9529016..9529136,9529410..9529462,9529863..9529907,9534827..9534905,9535003..9535045,9545403..9545510,9561124..9561261))
location: region:9433061-9561261:-1
so has part: feature:9561124-9561261:-1:exon
so has part: feature:9545403-9545510:-1:exon
so has part: feature:9535003-9535045:-1:exon
so has part: feature:9534827-9534905:-1:exon
so has part: feature:9529863-9529907:-1:exon
so has part: feature:9529410-9529462:-1:exon
so has part: feature:9529016-9529136:-1:exon
so has part: feature:9520495-9520582:-1:exon
so has part: feature:9516151-9516239:-1:exon
so has part: feature:9500632-9500695:-1:exon
so has part: feature:9496526-9496698:-1:exon
so has part: feature:9487092-9487160:-1:exon
so has part: feature:9481291-9481416:-1:exon
so has part: feature:9479684-9479842:-1:exon
so has part: feature:9470153-9470312:-1:exon
so has part: feature:9468676-9468759:-1:exon
so has part: feature:9468532-9468588:-1:exon
so has part: feature:9465778-9465934:-1:exon
so has part: feature:9463244-9463410:-1:exon
so has part: feature:9461692-9461782:-1:exon
so has part: feature:9461475-9461536:-1:exon
so has part: feature:9458960-9459106:-1:exon
so has part: feature:9456367-9456495:-1:exon
so has part: feature:9452978-9453126:-1:exon
so has part: feature:9445878-9446013:-1:exon
so has part: feature:9433061-9433147:-1:exon

XP_034368986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9561124-9561261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9545403-9545510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9535003-9535045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9534827-9534905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9529863-9529907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9529410-9529462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9529016-9529136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9520495-9520582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9516151-9516239:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9500632-9500695:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9496526-9496698:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9487092-9487160:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9481291-9481416:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9479684-9479842:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9470153-9470312:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9468676-9468759:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9468532-9468588:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9465778-9465934:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9463244-9463410:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9461692-9461782:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9461475-9461536:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9458960-9459106:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9456367-9456495:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9452978-9453126:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9445878-9446013:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9433061-9433147:-1:exon

LOC117716159
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9569545..9570449
location: region:9569545-9570449:1
so has part: feature:9569545-9570449:1:exon

117716159
type: Gene
SIO_000068: ncbigene

position:9569545:1
position: 9569545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9570449:1
position: 9570449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9569545-9570449:1:exon

LOC117716159
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716159
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC117716159
subclass of: SO_0000673
so part of: LOC117716159
location: 9569545..9570449
location: region:9569545-9570449:1
so has part: feature:9569545-9570449:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9569545-9570449:1:exon

LOC117716436
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716436
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9630420..9642105
location: region:9630420-9642105:1
so has part: feature:9630420-9642105:1:exon

117716436
type: Gene
SIO_000068: ncbigene

position:9630420:1
position: 9630420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9642105:1
position: 9642105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9630420-9642105:1:exon

LOC117716436
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716436
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716436
subclass of: SO_0000673
so part of: LOC117716436
location: 9630420..9630512
location: region:9630420-9630512:1
so has part: feature:9630420-9630512:1:exon

position:9630512:1
position: 9630512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9630420-9630512:1:exon

LOC117716436
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716436
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716436
subclass of: SO_0000673
so part of: LOC117716436
location: 9639946..9640023
location: region:9639946-9640023:1
so has part: feature:9639946-9640023:1:exon

position:9639946:1
position: 9639946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9640023:1
position: 9640023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9639946-9640023:1:exon

LOC117716436
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716436
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716436
subclass of: SO_0000673
so part of: LOC117716436
location: 9641527..9641842
location: region:9641527-9641842:1
so has part: feature:9641527-9641842:1:exon

position:9641527:1
position: 9641527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9641842:1
position: 9641842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9641527-9641842:1:exon

LOC117716436
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716436
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC117716436
subclass of: SO_0000673
so part of: LOC117716436
location: 9641881..9642105
location: region:9641881-9642105:1
so has part: feature:9641881-9642105:1:exon

position:9641881:1
position: 9641881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9641881-9642105:1:exon

Tmem177
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tmem177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9657810..9661529)
location: region:9657810-9661529:-1
so has part: feature:9657810-9661529:-1:exon
subclass of: SO_0000010

117715961
type: Gene
SIO_000068: ncbigene

position:9657810:-1
position: 9657810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9661529:-1
position: 9661529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9657810-9661529:-1:exon

Tmem177
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tmem177
product: transmembrane protein 177
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 long SRA read, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034512741.1
SIO_010081: Tmem177
subclass of: SO_0000673
so part of: Tmem177
location: complement(join(9657810..9659252,9661485..9661529))
location: region:9657810-9661529:-1
so has part: feature:9661485-9661529:-1:exon
so has part: feature:9657810-9659252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9661485-9661529:-1:exon

position:9661485:-1
position: 9661485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9657810-9659252:-1:exon

position:9659252:-1
position: 9659252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem177
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tmem177
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 177
translation: MAGPLWRAAAFIQRHRTGLLVGSCAGLFGVQISFHLFSDPIVQWLYQYWPHGQPAPLCPQLWSLFQEVLKDIGIPSGHCYKPFTAFTFQPVSAGFPRLPAGAVVGIPAIFLGGPVTNIEHTVIIHGQRVDWQSPAGTRLRDALTLSHDAQKFALAKEVVYLESGVAALQTLPAPACLAGTWAISVGAKHALGLYGGPMSLRAAFNLVAVVVGYVAYTFSKDSLTVALESWLDRRTASLSAAYVQGGVEFYEKILSGNLALRSLLGRQGEKLYTPSGNIVPRHWFRINHLPYTTRRDSLQQMWRATVSPGQS
SIO_010081: Tmem177
subclass of: SO_0000673
so part of: Tmem177
location: complement(9658110..9659045)
location: region:9658110-9659045:-1
so has part: feature:9658110-9659045:-1:exon

XP_034368632.1
type: Protein
SIO_000068: ncbiprotein

position:9658110:-1
position: 9658110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9659045:-1
position: 9659045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9658110-9659045:-1:exon

Cfap221
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Cfap221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9671804..9752794)
location: region:9671804-9752794:-1
so has part: feature:9671804-9752794:-1:exon
subclass of: SO_0000010

117716354
type: Gene
SIO_000068: ncbigene

position:9671804:-1
position: 9671804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9752794:-1
position: 9752794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9671804-9752794:-1:exon

Cfap221
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Cfap221
product: cilia and flagella associated protein 221
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513415.1
SIO_010081: Cfap221
subclass of: SO_0000673
so part of: Cfap221
location: complement(join(9671804..9672096,9673852..9673947,9678878..9678970,9683539..9683630,9685901..9686059,9687078..9687209,9687511..9687618,9688955..9689035,9691474..9691601,9695162..9695267,9697736..9697834,9704210..9704299,9705495..9705582,9707125..9707233,9707426..9707537,9707614..9707731,9709086..9709245,9715966..9716069,9737066..9737166,9739510..9739608,9739796..9739882,9744455..9744555,9750701..9750886,9752741..9752794))
location: region:9671804-9752794:-1
so has part: feature:9752741-9752794:-1:exon
so has part: feature:9750701-9750886:-1:exon
so has part: feature:9744455-9744555:-1:exon
so has part: feature:9739796-9739882:-1:exon
so has part: feature:9739510-9739608:-1:exon
so has part: feature:9737066-9737166:-1:exon
so has part: feature:9715966-9716069:-1:exon
so has part: feature:9709086-9709245:-1:exon
so has part: feature:9707614-9707731:-1:exon
so has part: feature:9707426-9707537:-1:exon
so has part: feature:9707125-9707233:-1:exon
so has part: feature:9705495-9705582:-1:exon
so has part: feature:9704210-9704299:-1:exon
so has part: feature:9697736-9697834:-1:exon
so has part: feature:9695162-9695267:-1:exon
so has part: feature:9691474-9691601:-1:exon
so has part: feature:9688955-9689035:-1:exon
so has part: feature:9687511-9687618:-1:exon
so has part: feature:9687078-9687209:-1:exon
so has part: feature:9685901-9686059:-1:exon
so has part: feature:9683539-9683630:-1:exon
so has part: feature:9678878-9678970:-1:exon
so has part: feature:9673852-9673947:-1:exon
so has part: feature:9671804-9672096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9752741-9752794:-1:exon

position:9752741:-1
position: 9752741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9750701-9750886:-1:exon

position:9750701:-1
position: 9750701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9750886:-1
position: 9750886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9744455-9744555:-1:exon

position:9744455:-1
position: 9744455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9744555:-1
position: 9744555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9739796-9739882:-1:exon

position:9739796:-1
position: 9739796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9739882:-1
position: 9739882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9739510-9739608:-1:exon

position:9739510:-1
position: 9739510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9739608:-1
position: 9739608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9737066-9737166:-1:exon

position:9737066:-1
position: 9737066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9737166:-1
position: 9737166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9715966-9716069:-1:exon

position:9715966:-1
position: 9715966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9716069:-1
position: 9716069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9709086-9709245:-1:exon

position:9709086:-1
position: 9709086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9709245:-1
position: 9709245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9707614-9707731:-1:exon

position:9707614:-1
position: 9707614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9707731:-1
position: 9707731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9707426-9707537:-1:exon

position:9707426:-1
position: 9707426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9707537:-1
position: 9707537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9707125-9707233:-1:exon

position:9707125:-1
position: 9707125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9707233:-1
position: 9707233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9705495-9705582:-1:exon

position:9705495:-1
position: 9705495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9705582:-1
position: 9705582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9704210-9704299:-1:exon

position:9704210:-1
position: 9704210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9704299:-1
position: 9704299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9697736-9697834:-1:exon

position:9697736:-1
position: 9697736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9697834:-1
position: 9697834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9695162-9695267:-1:exon

position:9695162:-1
position: 9695162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9695267:-1
position: 9695267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9691474-9691601:-1:exon

position:9691474:-1
position: 9691474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9691601:-1
position: 9691601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9688955-9689035:-1:exon

position:9688955:-1
position: 9688955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9689035:-1
position: 9689035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9687511-9687618:-1:exon

position:9687511:-1
position: 9687511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9687618:-1
position: 9687618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9687078-9687209:-1:exon

position:9687078:-1
position: 9687078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9687209:-1
position: 9687209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9685901-9686059:-1:exon

position:9685901:-1
position: 9685901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9686059:-1
position: 9686059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9683539-9683630:-1:exon

position:9683539:-1
position: 9683539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9683630:-1
position: 9683630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:9678878-9678970:-1:exon

position:9678878:-1
position: 9678878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9678970:-1
position: 9678970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:9673852-9673947:-1:exon

position:9673852:-1
position: 9673852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9673947:-1
position: 9673947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:9671804-9672096:-1:exon

position:9672096:-1
position: 9672096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Cfap221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Cfap221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 221
translation: MAAVKSPMQELKHAKEPFDKMSPLLLKSLVEEPKKRTEVPNHLLESKVYAKLLNNKVIQARPGIVHFGGYEIEKEHQQILNIANISDEDTHLHILPPQTKYFQINFEKKEHRLIPGLSLKVTIKFSPDEWRYYYDCIRIHCKGDDTLLVPIHAYPVLNDLDFPTFINLSDVFLGESKSYVIPLQCSCPVDFEFHITLLRSHQAFTIEPKSGIIPANGKARVVVKFKPIQYGMAQIKIQLWISQFNSQPYECVFTGTCYPNMALPLEEFERLNTRSKKVNVPLEKTTYVQFYPTPAKAKPQKLKEIDYQDLRFPADLSNPFAVATVLNQEPGKLKIKELKQVLDQGDEISKTRQMKEAIFEQKVRQDIMTEIENHLKWQVHLGKDHTSSRFRRELNEERHKAREKYKQNRGDPVIGEELQRLQTERSKKRIVRDLEEKTQEFHPNFDPLINNMWLSRHRAQRRFQQAARKVMLERRLLIMLGNIREMDKEGIMRKLVQVKRTLIQGENPYRSLRARMSQDDNLWRYSLQSEEVLHFAFPTDLQSYNELALDGLGLVPIKSSEVLIKHKYPYFTLKVPQLYKIKGYRPFSVNKSSTNYRLQKLARPLKHGAEDEVTTIITLPKKNTVQLSAKPSILSMKPPEGLAMSVEYDPLYIFNPSPGLFAVKHPLTYAETLIEYHLCSHPKYKYTQESHMGSSIPLTQKQFLHHTDIIPGVMNWKKFQPLVFSSMSDASKAEATQRSDWYSPMMLPIDVPAPLEDLPEEDRLETTERDLCDQSIEVMLTPEMIQVEFPILTHRDSKKEKDFKDSSQVPEKGGERLQEEMKNLRSKALNTYLILE
SIO_010081: Cfap221
subclass of: SO_0000673
so part of: Cfap221
location: complement(join(9671988..9672096,9673852..9673947,9678878..9678970,9683539..9683630,9685901..9686059,9687078..9687209,9687511..9687618,9688955..9689035,9691474..9691601,9695162..9695267,9697736..9697834,9704210..9704299,9705495..9705582,9707125..9707233,9707426..9707537,9707614..9707731,9709086..9709245,9715966..9716069,9737066..9737166,9739510..9739608,9739796..9739882,9744455..9744555,9750701..9750839))
location: region:9671988-9750839:-1
so has part: feature:9750701-9750839:-1:exon
so has part: feature:9744455-9744555:-1:exon
so has part: feature:9739796-9739882:-1:exon
so has part: feature:9739510-9739608:-1:exon
so has part: feature:9737066-9737166:-1:exon
so has part: feature:9715966-9716069:-1:exon
so has part: feature:9709086-9709245:-1:exon
so has part: feature:9707614-9707731:-1:exon
so has part: feature:9707426-9707537:-1:exon
so has part: feature:9707125-9707233:-1:exon
so has part: feature:9705495-9705582:-1:exon
so has part: feature:9704210-9704299:-1:exon
so has part: feature:9697736-9697834:-1:exon
so has part: feature:9695162-9695267:-1:exon
so has part: feature:9691474-9691601:-1:exon
so has part: feature:9688955-9689035:-1:exon
so has part: feature:9687511-9687618:-1:exon
so has part: feature:9687078-9687209:-1:exon
so has part: feature:9685901-9686059:-1:exon
so has part: feature:9683539-9683630:-1:exon
so has part: feature:9678878-9678970:-1:exon
so has part: feature:9673852-9673947:-1:exon
so has part: feature:9671988-9672096:-1:exon

XP_034369306.1
type: Protein
SIO_000068: ncbiprotein

position:9671988:-1
position: 9671988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9750839:-1
position: 9750839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9750701-9750839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9744455-9744555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9739796-9739882:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9739510-9739608:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9737066-9737166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9715966-9716069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9709086-9709245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9707614-9707731:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9707426-9707537:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9707125-9707233:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9705495-9705582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9704210-9704299:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9697736-9697834:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9695162-9695267:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9691474-9691601:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9688955-9689035:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9687511-9687618:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9687078-9687209:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9685901-9686059:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9683539-9683630:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9678878-9678970:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9673852-9673947:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9671988-9672096:-1:exon

Sctr
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Sctr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9762352..9816481
location: region:9762352-9816481:1
so has part: feature:9762352-9816481:1:exon
subclass of: SO_0000010

117716236
type: Gene
SIO_000068: ncbigene

position:9762352:1
position: 9762352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9816481:1
position: 9816481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9762352-9816481:1:exon

Sctr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sctr
product: secretin receptor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034513214.1
SIO_010081: Sctr
subclass of: SO_0000673
so part of: Sctr
location: join(9762352..9762698,9775891..9776005,9776197..9776241,9785265..9785372,9790186..9790289,9797140..9797237,9798259..9798391,9798771..9798924,9806124..9806184,9806782..9806851,9807862..9807953,9808839..9808965,9814857..9814898,9816061..9816481)
location: region:9762352-9816481:1
so has part: feature:9762352-9762698:1:exon
so has part: feature:9775891-9776005:1:exon
so has part: feature:9776197-9776241:1:exon
so has part: feature:9785265-9785372:1:exon
so has part: feature:9790186-9790289:1:exon
so has part: feature:9797140-9797237:1:exon
so has part: feature:9798259-9798391:1:exon
so has part: feature:9798771-9798924:1:exon
so has part: feature:9806124-9806184:1:exon
so has part: feature:9806782-9806851:1:exon
so has part: feature:9807862-9807953:1:exon
so has part: feature:9808839-9808965:1:exon
so has part: feature:9814857-9814898:1:exon
so has part: feature:9816061-9816481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9762352-9762698:1:exon

position:9762698:1
position: 9762698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9775891-9776005:1:exon

position:9775891:1
position: 9775891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9776005:1
position: 9776005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9776197-9776241:1:exon

position:9776197:1
position: 9776197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9776241:1
position: 9776241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9785265-9785372:1:exon

position:9785265:1
position: 9785265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9785372:1
position: 9785372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9790186-9790289:1:exon

position:9790186:1
position: 9790186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9790289:1
position: 9790289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9797140-9797237:1:exon

position:9797140:1
position: 9797140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9797237:1
position: 9797237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9798259-9798391:1:exon

position:9798259:1
position: 9798259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9798391:1
position: 9798391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9798771-9798924:1:exon

position:9798771:1
position: 9798771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9798924:1
position: 9798924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9806124-9806184:1:exon

position:9806124:1
position: 9806124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9806184:1
position: 9806184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9806782-9806851:1:exon

position:9806782:1
position: 9806782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9806851:1
position: 9806851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9807862-9807953:1:exon

position:9807862:1
position: 9807862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9807953:1
position: 9807953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9808839-9808965:1:exon

position:9808839:1
position: 9808839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9808965:1
position: 9808965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9814857-9814898:1:exon

position:9814857:1
position: 9814857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9814898:1
position: 9814898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9816061-9816481:1:exon

position:9816061:1
position: 9816061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sctr
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Sctr
product: secretin receptor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513215.1
SIO_010081: Sctr
subclass of: SO_0000673
so part of: Sctr
location: join(9762437..9762698,9775891..9776005,9776197..9776241,9785265..9785372,9790186..9790289,9797140..9797237,9798259..9798391,9798771..9798924,9806124..9806184,9806782..9806851,9807862..9807953,9808839..9808965,9814857..9814898,9816067..9816471)
location: region:9762437-9816471:1
so has part: feature:9762437-9762698:1:exon
so has part: feature:9775891-9776005:1:exon
so has part: feature:9776197-9776241:1:exon
so has part: feature:9785265-9785372:1:exon
so has part: feature:9790186-9790289:1:exon
so has part: feature:9797140-9797237:1:exon
so has part: feature:9798259-9798391:1:exon
so has part: feature:9798771-9798924:1:exon
so has part: feature:9806124-9806184:1:exon
so has part: feature:9806782-9806851:1:exon
so has part: feature:9807862-9807953:1:exon
so has part: feature:9808839-9808965:1:exon
so has part: feature:9814857-9814898:1:exon
so has part: feature:9816067-9816471:1:exon

position:9762437:1
position: 9762437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9816471:1
position: 9816471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9762437-9762698:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9775891-9776005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9776197-9776241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9785265-9785372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9790186-9790289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9797140-9797237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9798259-9798391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9798771-9798924:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9806124-9806184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9806782-9806851:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9807862-9807953:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9808839-9808965:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9814857-9814898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9816067-9816471:1:exon

position:9816067:1
position: 9816067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Sctr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sctr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretin receptor isoform X1
translation: MSPRLSLLLRLLLLTGVAHTVGALPRLCDVRRVLLQEQAQCLQELSREKAALGPEPVSASVFSPSASSHTLYQGCEGLWDNMSCWPSSAPAQTVEVQCPKFLQMLSSRNGSLFRNCTQDGWSETFPRPDLACGVNMNGSFNERRHAYLLKLKVMYTVGYSSSLAMLLVALSILCSFRRLHCTRNYIHMHLFVSFILRALSNFIKDAVLFPSDDVIYCDAHRVGCKLVMIFFQYCIMANYAWLLVEGLYLHMILAISFFSQRKCLQAFVLLGWGSPGIFVASWAITRHFLENTGCWDINSNASIWWVIRGPVILSILINFIFFINILRILMRKLRTQETRGNETNHYKRLAKSTLLLIPLFGIHYIVFAFSPEDAMEVQLFFELALGSFQGLVVAVLYCFLNGEVQLEIQKKWRQWHLQEFLLRPVAFTNSFSNATNGPTHSTKAGTSEQSRNIPGSSVI
SIO_010081: Sctr
subclass of: SO_0000673
so part of: Sctr
location: join(9762639..9762698,9775891..9776005,9776197..9776241,9785265..9785372,9790186..9790289,9797140..9797237,9798259..9798391,9798771..9798924,9806124..9806184,9806782..9806851,9807862..9807953,9808839..9808965,9814857..9814898,9816061..9816231)
location: region:9762639-9816231:1
so has part: feature:9762639-9762698:1:exon
so has part: feature:9775891-9776005:1:exon
so has part: feature:9776197-9776241:1:exon
so has part: feature:9785265-9785372:1:exon
so has part: feature:9790186-9790289:1:exon
so has part: feature:9797140-9797237:1:exon
so has part: feature:9798259-9798391:1:exon
so has part: feature:9798771-9798924:1:exon
so has part: feature:9806124-9806184:1:exon
so has part: feature:9806782-9806851:1:exon
so has part: feature:9807862-9807953:1:exon
so has part: feature:9808839-9808965:1:exon
so has part: feature:9814857-9814898:1:exon
so has part: feature:9816061-9816231:1:exon

XP_034369105.1
type: Protein
SIO_000068: ncbiprotein

position:9762639:1
position: 9762639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9816231:1
position: 9816231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9762639-9762698:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9775891-9776005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9776197-9776241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9785265-9785372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9790186-9790289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9797140-9797237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9798259-9798391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9798771-9798924:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9806124-9806184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9806782-9806851:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9807862-9807953:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9808839-9808965:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9814857-9814898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9816061-9816231:1:exon

Sctr
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Sctr
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretin receptor isoform X2
translation: MSPRLSLLLRLLLLTGVAHTVGALPRLCDVRRVLLQEQAQCLQELSREKAALGPEPVSASVFSPSASSHTLYQGCEGLWDNMSCWPSSAPAQTVEVQCPKFLQMLSSRNGSLFRNCTQDGWSETFPRPDLACGVNMNGSFNERRHAYLLKLKVMYTVGYSSSLAMLLVALSILCSFRRLHCTRNYIHMHLFVSFILRALSNFIKDAVLFPSDDVIYCDAHRVGCKLVMIFFQYCIMANYAWLLVEGLYLHMILAISFFSQRKCLQAFVLLGWGSPGIFVASWAITRHFLENTGCWDINSNASIWWVIRGPVILSILINFIFFINILRILMRKLRTQETRGNETNHYKRLAKSTLLLIPLFGIHYIVFAFSPEDAMEVQLFFELALGSFQGLVVAVLYCFLNGELEIQKKWRQWHLQEFLLRPVAFTNSFSNATNGPTHSTKAGTSEQSRNIPGSSVI
SIO_010081: Sctr
subclass of: SO_0000673
so part of: Sctr
location: join(9762639..9762698,9775891..9776005,9776197..9776241,9785265..9785372,9790186..9790289,9797140..9797237,9798259..9798391,9798771..9798924,9806124..9806184,9806782..9806851,9807862..9807953,9808839..9808965,9814857..9814898,9816067..9816231)
location: region:9762639-9816231:1
so has part: feature:9762639-9762698:1:exon
so has part: feature:9775891-9776005:1:exon
so has part: feature:9776197-9776241:1:exon
so has part: feature:9785265-9785372:1:exon
so has part: feature:9790186-9790289:1:exon
so has part: feature:9797140-9797237:1:exon
so has part: feature:9798259-9798391:1:exon
so has part: feature:9798771-9798924:1:exon
so has part: feature:9806124-9806184:1:exon
so has part: feature:9806782-9806851:1:exon
so has part: feature:9807862-9807953:1:exon
so has part: feature:9808839-9808965:1:exon
so has part: feature:9814857-9814898:1:exon
so has part: feature:9816067-9816231:1:exon

XP_034369106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9762639-9762698:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9775891-9776005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9776197-9776241:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9785265-9785372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9790186-9790289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9797140-9797237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9798259-9798391:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9798771-9798924:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9806124-9806184:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9806782-9806851:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9807862-9807953:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9808839-9808965:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9814857-9814898:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9816067-9816231:1:exon

Tmem37
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tmem37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9820499..9826676)
location: region:9820499-9826676:-1
so has part: feature:9820499-9826676:-1:exon
subclass of: SO_0000010

117716296
type: Gene
SIO_000068: ncbigene

position:9820499:-1
position: 9820499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9826676:-1
position: 9826676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9820499-9826676:-1:exon

Tmem37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tmem37
product: transmembrane protein 37
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513312.1
SIO_010081: Tmem37
subclass of: SO_0000673
so part of: Tmem37
location: complement(join(9820499..9821310,9826593..9826676))
location: region:9820499-9826676:-1
so has part: feature:9826593-9826676:-1:exon
so has part: feature:9820499-9821310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9826593-9826676:-1:exon

position:9826593:-1
position: 9826593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9820499-9821310:-1:exon

position:9821310:-1
position: 9821310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tmem37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-like subunit
translation: MTAIGAQAHKLLGPKRPHRAFFESFIRTLIIVCTALAVVLSSVSICDGHWLLEETRLFGLWYFCTVSNHSEPHCLRDLSQAHVPGLAVGMGLARSVAAMAVVAAIFGLELLIVSQVCEDVRSRRKWAIGSYLLLVAFILSSGGLLTFIILLKNQITLLGFTLMFWCEFTASFLFFLNATSGLHINSLTRPWDPPAGTLAYRKQGHDGTSLI
SIO_010081: Tmem37
subclass of: SO_0000673
so part of: Tmem37
location: complement(join(9820696..9821310,9826593..9826613))
location: region:9820696-9826613:-1
so has part: feature:9826593-9826613:-1:exon
so has part: feature:9820696-9821310:-1:exon

XP_034369203.1
type: Protein
SIO_000068: ncbiprotein

position:9820696:-1
position: 9820696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9826613:-1
position: 9826613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9826593-9826613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9820696-9821310:-1:exon

Dbi
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Dbi
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9866783..9874698)
location: region:9866783-9874698:-1
so has part: feature:9866783-9874698:-1:exon
subclass of: SO_0000010

117715955
type: Gene
SIO_000068: ncbigene

position:9866783:-1
position: 9866783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9874698:-1
position: 9874698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9866783-9874698:-1:exon

Dbi
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dbi
product: diazepam binding inhibitor, acyl-CoA binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 1 long SRA read, 11 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034512730.1
SIO_010081: Dbi
subclass of: SO_0000673
so part of: Dbi
location: complement(join(9866783..9867024,9869893..9869955,9873459..9873576,9874547..9874698))
location: region:9866783-9874698:-1
so has part: feature:9874547-9874698:-1:exon
so has part: feature:9873459-9873576:-1:exon
so has part: feature:9869893-9869955:-1:exon
so has part: feature:9866783-9867024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9874547-9874698:-1:exon

position:9874547:-1
position: 9874547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9873459-9873576:-1:exon

position:9873459:-1
position: 9873459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9873576:-1
position: 9873576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9869893-9869955:-1:exon

position:9869893:-1
position: 9869893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9869955:-1
position: 9869955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9866783-9867024:-1:exon

position:9867024:-1
position: 9867024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dbi
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dbi
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA-binding protein
translation: MSQAEFDKAAEEVKRLKTQPTDEEMLFVYSHFKQATVGDVNTDRPGLLDLKGKAKWDAWNKLKGTSKENAMKAYVEKVEELKKKYGI
SIO_010081: Dbi
subclass of: SO_0000673
so part of: Dbi
location: complement(join(9866951..9867024,9869893..9869955,9873459..9873576,9874547..9874555))
location: region:9866951-9874555:-1
so has part: feature:9874547-9874555:-1:exon
so has part: feature:9873459-9873576:-1:exon
so has part: feature:9869893-9869955:-1:exon
so has part: feature:9866951-9867024:-1:exon

XP_034368621.1
type: Protein
SIO_000068: ncbiprotein

position:9866951:-1
position: 9866951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9874555:-1
position: 9874555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9874547-9874555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9873459-9873576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9869893-9869955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9866951-9867024:-1:exon

C10H2orf76
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: C10H2orf76
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9874790..9938768
location: region:9874790-9938768:1
so has part: feature:9874790-9938768:1:exon
subclass of: SO_0000010

117716353
type: Gene
SIO_000068: ncbigene

position:9874790:1
position: 9874790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9938768:1
position: 9938768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9874790-9938768:1:exon

C10H2orf76
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C10H2orf76
product: chromosome 10 C2orf76 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513412.1
SIO_010081: C10H2orf76
subclass of: SO_0000673
so part of: C10H2orf76
location: join(9874790..9874820,9899755..9899898,9913661..9913711,9920340..9920377,9925446..9925527,9938620..9938768)
location: region:9874790-9938768:1
so has part: feature:9874790-9874820:1:exon
so has part: feature:9899755-9899898:1:exon
so has part: feature:9913661-9913711:1:exon
so has part: feature:9920340-9920377:1:exon
so has part: feature:9925446-9925527:1:exon
so has part: feature:9938620-9938768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9874790-9874820:1:exon

position:9874820:1
position: 9874820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9899755-9899898:1:exon

position:9899755:1
position: 9899755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9899898:1
position: 9899898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9913661-9913711:1:exon

position:9913661:1
position: 9913661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9913711:1
position: 9913711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9920340-9920377:1:exon

position:9920340:1
position: 9920340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9920377:1
position: 9920377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9925446-9925527:1:exon

position:9925446:1
position: 9925446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9925527:1
position: 9925527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9938620-9938768:1:exon

position:9938620:1
position: 9938620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C10H2orf76
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C10H2orf76
product: chromosome 10 C2orf76 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034513413.1
SIO_010081: C10H2orf76
subclass of: SO_0000673
so part of: C10H2orf76
location: join(9874790..9874820,9899755..9899898,9913661..9913711,9920340..9920377,9938620..9938767)
location: region:9874790-9938767:1
so has part: feature:9874790-9874820:1:exon
so has part: feature:9899755-9899898:1:exon
so has part: feature:9913661-9913711:1:exon
so has part: feature:9920340-9920377:1:exon
so has part: feature:9938620-9938767:1:exon

position:9938767:1
position: 9938767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9874790-9874820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9899755-9899898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9913661-9913711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9920340-9920377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9938620-9938767:1:exon

C10H2orf76
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C10H2orf76
product: chromosome 10 C2orf76 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513414.1
SIO_010081: C10H2orf76
subclass of: SO_0000673
so part of: C10H2orf76
location: join(9874790..9874820,9899755..9899898,9920340..9920377,9925446..9925527,9938620..9938760)
location: region:9874790-9938760:1
so has part: feature:9874790-9874820:1:exon
so has part: feature:9899755-9899898:1:exon
so has part: feature:9920340-9920377:1:exon
so has part: feature:9925446-9925527:1:exon
so has part: feature:9938620-9938760:1:exon

position:9938760:1
position: 9938760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9874790-9874820:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9899755-9899898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9920340-9920377:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9925446-9925527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9938620-9938760:1:exon

C10H2orf76
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C10H2orf76
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0538 protein C2orf76 homolog isoform X2
translation: MAAEEATVTVRLIRSFEHRNFRPVVYHGVNLHQTVKEFIVFLKQDVPLRTSLPPPLRNYKYDTLKILHQAHKAKPVKLKLHSSVEKIIQDTKLIPSRPGESVWLHLCIPLFH
SIO_010081: C10H2orf76
subclass of: SO_0000673
so part of: C10H2orf76
location: join(9899766..9899898,9913661..9913711,9920340..9920377,9938620..9938736)
location: region:9899766-9938736:1
so has part: feature:9899766-9899898:1:exon
so has part: feature:9913661-9913711:1:exon
so has part: feature:9920340-9920377:1:exon
so has part: feature:9938620-9938736:1:exon

XP_034369304.1
type: Protein
SIO_000068: ncbiprotein

position:9899766:1
position: 9899766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9938736:1
position: 9938736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9899766-9899898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9913661-9913711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9920340-9920377:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9938620-9938736:1:exon

C10H2orf76
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C10H2orf76
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0538 protein C2orf76 homolog isoform X1
translation: MAAEEATVTVRLIRSFEHRNFRPVVYHGVNLHQTVKEFIVFLKQDVPLRTSLPPPLRNYKYDTLKILHQAHKAKTNELVLGLEDDDTLLLKEDRTLKDSGIASETEIAFFCGEDYTRYKANPISSW
SIO_010081: C10H2orf76
subclass of: SO_0000673
so part of: C10H2orf76
location: join(9899766..9899898,9913661..9913711,9920340..9920377,9925446..9925527,9938620..9938696)
location: region:9899766-9938696:1
so has part: feature:9899766-9899898:1:exon
so has part: feature:9913661-9913711:1:exon
so has part: feature:9920340-9920377:1:exon
so has part: feature:9925446-9925527:1:exon
so has part: feature:9938620-9938696:1:exon

XP_034369303.1
type: Protein
SIO_000068: ncbiprotein

position:9938696:1
position: 9938696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9899766-9899898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9913661-9913711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9920340-9920377:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9925446-9925527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9938620-9938696:1:exon

C10H2orf76
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C10H2orf76
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0538 protein C2orf76 homolog isoform X3
translation: MAAEEATVTVRLIRSFEHRNFRPVVYHGVNLHQTVKEFIVFLKQDTLKILHQAHKAKTNELVLGLEDDDTLLLKEDRTLKDSGIASETEIAFFCGEDYTRYKANPISSW
SIO_010081: C10H2orf76
subclass of: SO_0000673
so part of: C10H2orf76
location: join(9899766..9899898,9920340..9920377,9925446..9925527,9938620..9938696)
location: region:9899766-9938696:1
so has part: feature:9899766-9899898:1:exon
so has part: feature:9920340-9920377:1:exon
so has part: feature:9925446-9925527:1:exon
so has part: feature:9938620-9938696:1:exon

XP_034369305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9899766-9899898:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9920340-9920377:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9925446-9925527:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9938620-9938696:1:exon

Steap3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Steap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9977176..10020870)
location: region:9977176-10020870:-1
so has part: feature:9977176-10020870:-1:exon
subclass of: SO_0000010

117716352
type: Gene
SIO_000068: ncbigene

position:9977176:-1
position: 9977176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10020870:-1
position: 10020870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9977176-10020870:-1:exon

Steap3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Steap3
product: STEAP3 metalloreductase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513411.1
SIO_010081: Steap3
subclass of: SO_0000673
so part of: Steap3
location: complement(join(9977176..9978729,9984746..9984910,9994244..9994771,9996557..9997056,10020807..10020870))
location: region:9977176-10020870:-1
so has part: feature:10020807-10020870:-1:exon
so has part: feature:9996557-9997056:-1:exon
so has part: feature:9994244-9994771:-1:exon
so has part: feature:9984746-9984910:-1:exon
so has part: feature:9977176-9978729:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10020807-10020870:-1:exon

position:10020807:-1
position: 10020807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9996557-9997056:-1:exon

position:9996557:-1
position: 9996557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9997056:-1
position: 9997056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9994244-9994771:-1:exon

position:9994244:-1
position: 9994244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9994771:-1
position: 9994771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9984746-9984910:-1:exon

position:9984746:-1
position: 9984746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9984910:-1
position: 9984910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9977176-9978729:-1:exon

position:9978729:-1
position: 9978729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Steap3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Steap3
product: STEAP3 metalloreductase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 12 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513410.1
SIO_010081: Steap3
subclass of: SO_0000673
so part of: Steap3
location: complement(join(9977176..9978729,9984746..9984910,9994244..9994771,9996557..9997056,10014624..10014736))
location: region:9977176-10014736:-1
so has part: feature:10014624-10014736:-1:exon
so has part: feature:9996557-9997056:-1:exon
so has part: feature:9994244-9994771:-1:exon
so has part: feature:9984746-9984910:-1:exon
so has part: feature:9977176-9978729:-1:exon

position:10014736:-1
position: 10014736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10014624-10014736:-1:exon

position:10014624:-1
position: 10014624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9996557-9997056:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9994244-9994771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9984746-9984910:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9977176-9978729:-1:exon

Steap3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Steap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metalloreductase STEAP3 isoform X1
translation: MAQSPVAGTTMSGEMDKPLISHRLVDSDGSLAEVPKEAPKVGILGSGDFARSLATRLVGSGFSVVVGSRNPKRTAGLFPSLAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLADQLAGKILVDVSNPTEKEHLQQRQSNAEYLASLFPASTVVKAFNVISAWALQAGPRDGNRQVLICGDQLEAKRTISEMARAMGFTPLDMGSLASAREVEAIPLRLLPSWKVPTLLALGLFVCFYAYNFIRDVLQPYIRKDENKFYKMPLSVVNTTLPCVAYVMLSLVYLPGVLAAALQLRRGTKYQRFPDWLDHWLQHRKQIGLLSFFFAMLHALYSFCLPLRRSHRYDLVNLAVKQVLANKSRLWVEEEVWRMEIYLSLGVLALGMLSLLAVTSLPSIANSLNWKEFSFVQSTLGFVALTLSTMHTLTYGWTRAFEESHYKFYLPPTFTLTLLLPCVIILAKGLFLLPCLSRRLTKIRRGWEKDGAVKFMLPADHTQGEKTSHV
SIO_010081: Steap3
subclass of: SO_0000673
so part of: Steap3
location: complement(join(9978448..9978729,9984746..9984910,9994244..9994771,9996557..9997056,10014624..10014645))
location: region:9978448-10014645:-1
so has part: feature:10014624-10014645:-1:exon
so has part: feature:9996557-9997056:-1:exon
so has part: feature:9994244-9994771:-1:exon
so has part: feature:9984746-9984910:-1:exon
so has part: feature:9978448-9978729:-1:exon

XP_034369301.1
type: Protein
SIO_000068: ncbiprotein

position:9978448:-1
position: 9978448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10014645:-1
position: 10014645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10014624-10014645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9996557-9997056:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9994244-9994771:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9984746-9984910:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9978448-9978729:-1:exon

Steap3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Steap3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metalloreductase STEAP3 isoform X2
translation: MSGEMDKPLISHRLVDSDGSLAEVPKEAPKVGILGSGDFARSLATRLVGSGFSVVVGSRNPKRTAGLFPSLAQVTFQEEAVSSPEVIFVAVFREHYSSLCSLADQLAGKILVDVSNPTEKEHLQQRQSNAEYLASLFPASTVVKAFNVISAWALQAGPRDGNRQVLICGDQLEAKRTISEMARAMGFTPLDMGSLASAREVEAIPLRLLPSWKVPTLLALGLFVCFYAYNFIRDVLQPYIRKDENKFYKMPLSVVNTTLPCVAYVMLSLVYLPGVLAAALQLRRGTKYQRFPDWLDHWLQHRKQIGLLSFFFAMLHALYSFCLPLRRSHRYDLVNLAVKQVLANKSRLWVEEEVWRMEIYLSLGVLALGMLSLLAVTSLPSIANSLNWKEFSFVQSTLGFVALTLSTMHTLTYGWTRAFEESHYKFYLPPTFTLTLLLPCVIILAKGLFLLPCLSRRLTKIRRGWEKDGAVKFMLPADHTQGEKTSHV
SIO_010081: Steap3
subclass of: SO_0000673
so part of: Steap3
location: complement(join(9978448..9978729,9984746..9984910,9994244..9994771,9996557..9997048))
location: region:9978448-9997048:-1
so has part: feature:9996557-9997048:-1:exon
so has part: feature:9994244-9994771:-1:exon
so has part: feature:9984746-9984910:-1:exon
so has part: feature:9978448-9978729:-1:exon

XP_034369302.1
type: Protein
SIO_000068: ncbiprotein

position:9997048:-1
position: 9997048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9996557-9997048:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9994244-9994771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9984746-9984910:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9978448-9978729:-1:exon

C1ql2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: C1ql2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10093815..10096542
location: region:10093815-10096542:1
so has part: feature:10093815-10096542:1:exon
subclass of: SO_0000010

117715963
type: Gene
SIO_000068: ncbigene

position:10093815:1
position: 10093815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10096542:1
position: 10096542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10093815-10096542:1:exon

C1ql2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: C1ql2
product: complement C1q like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034512743.1
SIO_010081: C1ql2
subclass of: SO_0000673
so part of: C1ql2
location: join(10093815..10095161,10095762..10096542)
location: region:10093815-10096542:1
so has part: feature:10093815-10095161:1:exon
so has part: feature:10095762-10096542:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10093815-10095161:1:exon

position:10095161:1
position: 10095161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10095762-10096542:1:exon

position:10095762:1
position: 10095762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1ql2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: C1ql2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q-like protein 2
translation: MALGLLIAVPLLLQAAPPGAAHYEMLGTCRMICDPYSVAPAGGPAGAKAPPPGPSTAALEVMQDLSANPPPPFIQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTTSAAGGVGVVGGGTGGGGDTEGEVTSALSAAFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGNHYDPTTGKFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHLDSGDEVYVKLDGGKAHGGNNNKYSTFSGFLLYPD
SIO_010081: C1ql2
subclass of: SO_0000673
so part of: C1ql2
location: join(10094478..10095161,10095762..10095941)
location: region:10094478-10095941:1
so has part: feature:10094478-10095161:1:exon
so has part: feature:10095762-10095941:1:exon

XP_034368634.1
type: Protein
SIO_000068: ncbiprotein

position:10094478:1
position: 10094478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10095941:1
position: 10095941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10094478-10095161:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10095762-10095941:1:exon

Marco
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Marco
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10234940..10269392)
location: region:10234940-10269392:-1
so has part: feature:10234940-10269392:-1:exon
subclass of: SO_0000010

117716439
type: Gene
SIO_000068: ncbigene

position:10234940:-1
position: 10234940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10269392:-1
position: 10269392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10234940-10269392:-1:exon

Marco
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Marco
product: macrophage receptor with collagenous structure
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 4 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513486.1
SIO_010081: Marco
subclass of: SO_0000673
so part of: Marco
location: complement(join(10234940..10235190,10236918..10237094,10237723..10237767,10238200..10238298,10239927..10239971,10246025..10246087,10246174..10246272,10246976..10247011,10247700..10247798,10249935..10250042,10250330..10250374,10252603..10252647,10253758..10253856,10255346..10255381,10255781..10256002,10256445..10256546,10269037..10269392))
location: region:10234940-10269392:-1
so has part: feature:10269037-10269392:-1:exon
so has part: feature:10256445-10256546:-1:exon
so has part: feature:10255781-10256002:-1:exon
so has part: feature:10255346-10255381:-1:exon
so has part: feature:10253758-10253856:-1:exon
so has part: feature:10252603-10252647:-1:exon
so has part: feature:10250330-10250374:-1:exon
so has part: feature:10249935-10250042:-1:exon
so has part: feature:10247700-10247798:-1:exon
so has part: feature:10246976-10247011:-1:exon
so has part: feature:10246174-10246272:-1:exon
so has part: feature:10246025-10246087:-1:exon
so has part: feature:10239927-10239971:-1:exon
so has part: feature:10238200-10238298:-1:exon
so has part: feature:10237723-10237767:-1:exon
so has part: feature:10236918-10237094:-1:exon
so has part: feature:10234940-10235190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10269037-10269392:-1:exon

position:10269037:-1
position: 10269037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10256445-10256546:-1:exon

position:10256445:-1
position: 10256445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10256546:-1
position: 10256546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10255781-10256002:-1:exon

position:10255781:-1
position: 10255781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10256002:-1
position: 10256002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10255346-10255381:-1:exon

position:10255346:-1
position: 10255346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10255381:-1
position: 10255381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10253758-10253856:-1:exon

position:10253758:-1
position: 10253758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10253856:-1
position: 10253856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10252603-10252647:-1:exon

position:10252603:-1
position: 10252603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10252647:-1
position: 10252647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10250330-10250374:-1:exon

position:10250330:-1
position: 10250330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10250374:-1
position: 10250374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10249935-10250042:-1:exon

position:10249935:-1
position: 10249935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10250042:-1
position: 10250042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10247700-10247798:-1:exon

position:10247700:-1
position: 10247700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10247798:-1
position: 10247798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10246976-10247011:-1:exon

position:10246976:-1
position: 10246976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10247011:-1
position: 10247011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10246174-10246272:-1:exon

position:10246174:-1
position: 10246174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10246272:-1
position: 10246272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10246025-10246087:-1:exon

position:10246025:-1
position: 10246025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10246087:-1
position: 10246087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10239927-10239971:-1:exon

position:10239927:-1
position: 10239927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10239971:-1
position: 10239971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10238200-10238298:-1:exon

position:10238200:-1
position: 10238200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10238298:-1
position: 10238298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10237723-10237767:-1:exon

position:10237723:-1
position: 10237723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10237767:-1
position: 10237767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10236918-10237094:-1:exon

position:10236918:-1
position: 10236918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10237094:-1
position: 10237094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:10234940-10235190:-1:exon

position:10235190:-1
position: 10235190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Marco
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Marco
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: macrophage receptor MARCO
translation: MGSKETFKEEAFLGSPEDGDNFDQAMFPVMETFEINDPVPKKRNGGTFCMAIMAIHLILLTAGTALLMIQVLNLQEQFHVLEMCCGNGTLAAEDRPRFLLQWASPKTHLVPGAQGLQALQAQLSWVHTSQEQLRQQVNNLTQNPELFQIKGERGSPGPKGDPGAPGSPGLPGPPAEKGEKGSAGRDGTPGVQGPQGPPGSKGEAGLQGFTGAPGKQGAAGAPGPQGEKGSKGDKGLTGPKGEHGTKGDKGDLGLPGSKGDMGMKGDMGVMGSPGAQGPKGDAGKPGLPGLAGSPGAKGDQGKPGVQGVPGPLGAPGPSGARGEPGLTGPPGPTGPPGIAGNPGVAGIKGSKGDTGIQGQKGTKGESGVPGLVGRKGDTGSRGLPGPKGEPGQAGLKGDPGMKGSSGQQGQKGEKGEKGWSGQVVRIVGGTSRGRAEVYYNNIWGTICDDGWDNNDATVFCRMLGFSSGKGLSSYGGGSGNIWLDDVDCRGTEQSLWDCRKSSWGSHNCGHSEDAGVECR
SIO_010081: Marco
subclass of: SO_0000673
so part of: Marco
location: complement(join(10235060..10235190,10236918..10237094,10237723..10237767,10238200..10238298,10239927..10239971,10246025..10246087,10246174..10246272,10246976..10247011,10247700..10247798,10249935..10250042,10250330..10250374,10252603..10252647,10253758..10253856,10255346..10255381,10255781..10256002,10256445..10256546,10269037..10269145))
location: region:10235060-10269145:-1
so has part: feature:10269037-10269145:-1:exon
so has part: feature:10256445-10256546:-1:exon
so has part: feature:10255781-10256002:-1:exon
so has part: feature:10255346-10255381:-1:exon
so has part: feature:10253758-10253856:-1:exon
so has part: feature:10252603-10252647:-1:exon
so has part: feature:10250330-10250374:-1:exon
so has part: feature:10249935-10250042:-1:exon
so has part: feature:10247700-10247798:-1:exon
so has part: feature:10246976-10247011:-1:exon
so has part: feature:10246174-10246272:-1:exon
so has part: feature:10246025-10246087:-1:exon
so has part: feature:10239927-10239971:-1:exon
so has part: feature:10238200-10238298:-1:exon
so has part: feature:10237723-10237767:-1:exon
so has part: feature:10236918-10237094:-1:exon
so has part: feature:10235060-10235190:-1:exon

XP_034369377.1
type: Protein
SIO_000068: ncbiprotein

position:10235060:-1
position: 10235060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10269145:-1
position: 10269145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10269037-10269145:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10256445-10256546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10255781-10256002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10255346-10255381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10253758-10253856:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10252603-10252647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10250330-10250374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10249935-10250042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10247700-10247798:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10246976-10247011:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10246174-10246272:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10246025-10246087:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10239927-10239971:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10238200-10238298:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10237723-10237767:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10236918-10237094:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10235060-10235190:-1:exon

En1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: En1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10358471..10364043
location: region:10358471-10364043:1
so has part: feature:10358471-10364043:1:exon
subclass of: SO_0000010

117715984
type: Gene
SIO_000068: ncbigene

position:10358471:1
position: 10358471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10364043:1
position: 10364043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10358471-10364043:1:exon

En1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: En1
product: engrailed homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034512805.1
SIO_010081: En1
subclass of: SO_0000673
so part of: En1
location: join(10358471..10360010,10362937..10364043)
location: region:10358471-10364043:1
so has part: feature:10358471-10360010:1:exon
so has part: feature:10362937-10364043:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10358471-10360010:1:exon

position:10360010:1
position: 10360010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10362937-10364043:1:exon

position:10362937:1
position: 10362937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

En1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: En1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein engrailed-1
translation: MEEQQPEPKSQRDSGLGAVAAAAAVVAAAAPGGLSLSLSPGASGSSGSDGDSVPVSPQPAPPSPPAAPCLPPLAHHPHLPPHPPPPPPPPPPPPPQHLVAPAHQPQPAAQLHRTTNFFIDNILRPDFGCKKEQPLPQLLVASAAAGGGAAGGGGSRVERDRGQTGAGRDPVHSLGTRASGPASLLCAPDANCGPPDGSQPATAVGAGASKAGNPAAAAAAAAAAAAAAVAAAAAAAASKPSDSGGGSGGSAGSPGAQGAKFPEHNPAILLMGSANGGPVVKTDSQQPLVWPAWVYCTRYSDRPSSGPRTRKLKKKKNEKEDKRPRTAFTAEQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKRAKIKKATGIKNGLALHLMAQGLYNHSTTTVQDKDESE
SIO_010081: En1
subclass of: SO_0000673
so part of: En1
location: join(10359095..10360010,10362937..10363253)
location: region:10359095-10363253:1
so has part: feature:10359095-10360010:1:exon
so has part: feature:10362937-10363253:1:exon

XP_034368696.1
type: Protein
SIO_000068: ncbiprotein

position:10359095:1
position: 10359095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10363253:1
position: 10363253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10359095-10360010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10362937-10363253:1:exon

LOC117716632
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716632
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10840284..10872550
location: region:10840284-10872550:1
so has part: feature:10840284-10872550:1:exon
subclass of: SO_0000011

117716632
type: Gene
SIO_000068: ncbigene

position:10840284:1
position: 10840284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10872550:1
position: 10872550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10840284-10872550:1:exon

LOC117716632
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: lncRNA
gene: LOC117716632
product: uncharacterized LOC117716632
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA
transcript id: XR_004607755.1
SIO_010081: LOC117716632
subclass of: SO_0000673
so part of: LOC117716632
location: join(10840284..10840436,10851897..10851945,10871443..10872550)
location: region:10840284-10872550:1
so has part: feature:10840284-10840436:1:exon
so has part: feature:10851897-10851945:1:exon
so has part: feature:10871443-10872550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10840284-10840436:1:exon

position:10840436:1
position: 10840436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10851897-10851945:1:exon

position:10851897:1
position: 10851897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10851945:1
position: 10851945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10871443-10872550:1:exon

position:10871443:1
position: 10871443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716062
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10965196..10968150
location: region:10965196-10968150:1
so has part: feature:10965196-10968150:1:exon
subclass of: SO_0000011

117716062
type: Gene
SIO_000068: ncbigene

position:10965196:1
position: 10965196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10968150:1
position: 10968150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10965196-10968150:1:exon

LOC117716062
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: lncRNA
gene: LOC117716062
product: uncharacterized LOC117716062
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA
transcript id: XR_004607724.1
SIO_010081: LOC117716062
subclass of: SO_0000673
so part of: LOC117716062
location: join(10965196..10965248,10967750..10968150)
location: region:10965196-10968150:1
so has part: feature:10965196-10965248:1:exon
so has part: feature:10967750-10968150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10965196-10965248:1:exon

position:10965248:1
position: 10965248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10967750-10968150:1:exon

position:10967750:1
position: 10967750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Insig2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Insig2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11040332..11064031)
location: region:11040332-11064031:-1
so has part: feature:11040332-11064031:-1:exon
subclass of: SO_0000010

117716267
type: Gene
SIO_000068: ncbigene

position:11040332:-1
position: 11040332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11064031:-1
position: 11064031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11040332-11064031:-1:exon

Insig2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Insig2
product: insulin induced gene 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 6 long SRA reads, 20 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513276.1
SIO_010081: Insig2
subclass of: SO_0000673
so part of: Insig2
location: complement(join(11040332..11042013,11042973..11043072,11043248..11043414,11047176..11047300,11055032..11055410,11063672..11064031))
location: region:11040332-11064031:-1
so has part: feature:11063672-11064031:-1:exon
so has part: feature:11055032-11055410:-1:exon
so has part: feature:11047176-11047300:-1:exon
so has part: feature:11043248-11043414:-1:exon
so has part: feature:11042973-11043072:-1:exon
so has part: feature:11040332-11042013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11063672-11064031:-1:exon

position:11063672:-1
position: 11063672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11055032-11055410:-1:exon

position:11055032:-1
position: 11055032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11055410:-1
position: 11055410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11047176-11047300:-1:exon

position:11047176:-1
position: 11047176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11047300:-1
position: 11047300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11043248-11043414:-1:exon

position:11043248:-1
position: 11043248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11043414:-1
position: 11043414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11042973-11043072:-1:exon

position:11042973:-1
position: 11042973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11043072:-1
position: 11043072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11040332-11042013:-1:exon

position:11042013:-1
position: 11042013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Insig2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Insig2
product: insulin induced gene 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034513275.1
SIO_010081: Insig2
subclass of: SO_0000673
so part of: Insig2
location: complement(join(11040332..11042013,11042973..11043072,11043248..11043426,11047176..11047300,11055032..11055410,11063672..11063953))
location: region:11040332-11063953:-1
so has part: feature:11063672-11063953:-1:exon
so has part: feature:11055032-11055410:-1:exon
so has part: feature:11047176-11047300:-1:exon
so has part: feature:11043248-11043426:-1:exon
so has part: feature:11042973-11043072:-1:exon
so has part: feature:11040332-11042013:-1:exon

position:11063953:-1
position: 11063953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11063672-11063953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11055032-11055410:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11047176-11047300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11043248-11043426:-1:exon

position:11043426:-1
position: 11043426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11042973-11043072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11040332-11042013:-1:exon

Insig2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Insig2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-induced gene 2 protein isoform X2
translation: MAEGETESPRPKKCGPYISSVTSQNVNVVIRGVVLFFIGVFLALVLNLLQIQRNVTLFPPDVITSIFSSAWWVPPCCGTASAVIGLLYPCIDRHLGEPHKFKREWSSVMRCVAVFVGINHASAKVDFDNNFQFSLTLAALSVGLWWTFDRSRSGFGLGVGIAFLATIVTQLLVYNGVYQYTSPDFLYVRSWLPCIFFAGGITMGNIGRQLAMYECKVIAEKSHQE
SIO_010081: Insig2
subclass of: SO_0000673
so part of: Insig2
location: complement(join(11041972..11042013,11042973..11043072,11043248..11043414,11047176..11047300,11055032..11055275))
location: region:11041972-11055275:-1
so has part: feature:11055032-11055275:-1:exon
so has part: feature:11047176-11047300:-1:exon
so has part: feature:11043248-11043414:-1:exon
so has part: feature:11042973-11043072:-1:exon
so has part: feature:11041972-11042013:-1:exon

XP_034369167.1
type: Protein
SIO_000068: ncbiprotein

position:11041972:-1
position: 11041972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11055275:-1
position: 11055275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11055032-11055275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11047176-11047300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11043248-11043414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11042973-11043072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11041972-11042013:-1:exon

Insig2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Insig2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-induced gene 2 protein isoform X1
translation: MAEGETESPRPKKCGPYISSVTSQNVNVVIRGVVLFFIGVFLALVLNLLQIQRNVTLFPPDVITSIFSSAWWVPPCCGTASAVIGLLYPCIDRHLGEPHKFKREWSSVMRCVAVFVGINHASAHWSQKVDFDNNFQFSLTLAALSVGLWWTFDRSRSGFGLGVGIAFLATIVTQLLVYNGVYQYTSPDFLYVRSWLPCIFFAGGITMGNIGRQLAMYECKVIAEKSHQE
SIO_010081: Insig2
subclass of: SO_0000673
so part of: Insig2
location: complement(join(11041972..11042013,11042973..11043072,11043248..11043426,11047176..11047300,11055032..11055275))
location: region:11041972-11055275:-1
so has part: feature:11055032-11055275:-1:exon
so has part: feature:11047176-11047300:-1:exon
so has part: feature:11043248-11043426:-1:exon
so has part: feature:11042973-11043072:-1:exon
so has part: feature:11041972-11042013:-1:exon

XP_034369166.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11055032-11055275:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11047176-11047300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11043248-11043426:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11042973-11043072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11041972-11042013:-1:exon

Ccdc93
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ccdc93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11170334..11246378
location: region:11170334-11246378:1
so has part: feature:11170334-11246378:1:exon
subclass of: SO_0000010

117716164
type: Gene
SIO_000068: ncbigene

position:11170334:1
position: 11170334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11246378:1
position: 11246378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11170334-11246378:1:exon

Ccdc93
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ccdc93
product: coiled-coil domain containing 93
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 2 long SRA reads, 14 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513104.1
SIO_010081: Ccdc93
subclass of: SO_0000673
so part of: Ccdc93
location: join(11170334..11170542,11173664..11173777,11176897..11176991,11180656..11180767,11184371..11184469,11186476..11186532,11193647..11193747,11198285..11198321,11198718..11198810,11199057..11199107,11199948..11200034,11214198..11214314,11216782..11216844,11220994..11221067,11222163..11222244,11222796..11222861,11223513..11223566,11225196..11225258,11230477..11230585,11232073..11232155,11233610..11233647,11235881..11235965,11237639..11237752,11240131..11246378)
location: region:11170334-11246378:1
so has part: feature:11170334-11170542:1:exon
so has part: feature:11173664-11173777:1:exon
so has part: feature:11176897-11176991:1:exon
so has part: feature:11180656-11180767:1:exon
so has part: feature:11184371-11184469:1:exon
so has part: feature:11186476-11186532:1:exon
so has part: feature:11193647-11193747:1:exon
so has part: feature:11198285-11198321:1:exon
so has part: feature:11198718-11198810:1:exon
so has part: feature:11199057-11199107:1:exon
so has part: feature:11199948-11200034:1:exon
so has part: feature:11214198-11214314:1:exon
so has part: feature:11216782-11216844:1:exon
so has part: feature:11220994-11221067:1:exon
so has part: feature:11222163-11222244:1:exon
so has part: feature:11222796-11222861:1:exon
so has part: feature:11223513-11223566:1:exon
so has part: feature:11225196-11225258:1:exon
so has part: feature:11230477-11230585:1:exon
so has part: feature:11232073-11232155:1:exon
so has part: feature:11233610-11233647:1:exon
so has part: feature:11235881-11235965:1:exon
so has part: feature:11237639-11237752:1:exon
so has part: feature:11240131-11246378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11170334-11170542:1:exon

position:11170542:1
position: 11170542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11173664-11173777:1:exon

position:11173664:1
position: 11173664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11173777:1
position: 11173777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11176897-11176991:1:exon

position:11176897:1
position: 11176897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11176991:1
position: 11176991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11180656-11180767:1:exon

position:11180656:1
position: 11180656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11180767:1
position: 11180767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11184371-11184469:1:exon

position:11184371:1
position: 11184371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11184469:1
position: 11184469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11186476-11186532:1:exon

position:11186476:1
position: 11186476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11186532:1
position: 11186532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11193647-11193747:1:exon

position:11193647:1
position: 11193647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11193747:1
position: 11193747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11198285-11198321:1:exon

position:11198285:1
position: 11198285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11198321:1
position: 11198321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11198718-11198810:1:exon

position:11198718:1
position: 11198718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11198810:1
position: 11198810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11199057-11199107:1:exon

position:11199057:1
position: 11199057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11199107:1
position: 11199107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11199948-11200034:1:exon

position:11199948:1
position: 11199948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11200034:1
position: 11200034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11214198-11214314:1:exon

position:11214198:1
position: 11214198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11214314:1
position: 11214314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11216782-11216844:1:exon

position:11216782:1
position: 11216782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11216844:1
position: 11216844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:11220994-11221067:1:exon

position:11220994:1
position: 11220994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11221067:1
position: 11221067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:11222163-11222244:1:exon

position:11222163:1
position: 11222163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11222244:1
position: 11222244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:11222796-11222861:1:exon

position:11222796:1
position: 11222796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11222861:1
position: 11222861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:11223513-11223566:1:exon

position:11223513:1
position: 11223513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11223566:1
position: 11223566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:11225196-11225258:1:exon

position:11225196:1
position: 11225196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11225258:1
position: 11225258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:11230477-11230585:1:exon

position:11230477:1
position: 11230477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11230585:1
position: 11230585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:11232073-11232155:1:exon

position:11232073:1
position: 11232073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11232155:1
position: 11232155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:11233610-11233647:1:exon

position:11233610:1
position: 11233610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11233647:1
position: 11233647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:11235881-11235965:1:exon

position:11235881:1
position: 11235881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11235965:1
position: 11235965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:11237639-11237752:1:exon

position:11237639:1
position: 11237639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11237752:1
position: 11237752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:11240131-11246378:1:exon

position:11240131:1
position: 11240131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ccdc93
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ccdc93
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 93
translation: MGLPKGPEGQGLPEVETREDEEQNVKLTEILELLVAAGYFRARIKGLSPFDKVVGGMTWCITTCSFDVDVDLLFQENSTIGQKIALSEKIVSVLPRMKCPHQLEPHQIQGMDFIHIFPVVQWLVKRAIETKEEMGDYIRSYSISQFQKTYSLPEDDDFIKRKDKAIKMVVDLSDVYKPRRKYRRQQGAEELLDEESRVHSTLLEYGRRYGFSRQSKTEKAEDKKTALAAGLSAAEKPDAHEEDELQAAEEQRIQSLMTKMTAMANEESRLTASSVGQIVGLCSAEIKQIVSEYAGKQSELSSEESPEKLGTSQLHQRKVISLNKQILQKTKHLEELQANHSSLQAKYSDRKKTLTELKNHGEKLDKEQAALEKVEAKADPSILQNLRALVAMNESLKSQEQEFKAHCREEMARLQQDIEALKAERAPGEKTISSGEPQGALTSTMTHNEDLDRRYNMEKEKLYKIRLLQARRNREIAILHRKIDEVPSRAELIQYQKRFIELYRQISAVHKETKQFFTLYNTLDDKKVYLEKEISLLNSIHENFSQAMASPAARDQFLRQMEQIVEGIKQSRMKMEKKKQENKMRRDQLNDQYLELLEKQRLYFKTVKEFKEEGRKNELLLSKIKAKAS
SIO_010081: Ccdc93
subclass of: SO_0000673
so part of: Ccdc93
location: join(11170501..11170542,11173664..11173777,11176897..11176991,11180656..11180767,11184371..11184469,11186476..11186532,11193647..11193747,11198285..11198321,11198718..11198810,11199057..11199107,11199948..11200034,11214198..11214314,11216782..11216844,11220994..11221067,11222163..11222244,11222796..11222861,11223513..11223566,11225196..11225258,11230477..11230585,11232073..11232155,11233610..11233647,11235881..11235965,11237639..11237752,11240131..11240184)
location: region:11170501-11240184:1
so has part: feature:11170501-11170542:1:exon
so has part: feature:11173664-11173777:1:exon
so has part: feature:11176897-11176991:1:exon
so has part: feature:11180656-11180767:1:exon
so has part: feature:11184371-11184469:1:exon
so has part: feature:11186476-11186532:1:exon
so has part: feature:11193647-11193747:1:exon
so has part: feature:11198285-11198321:1:exon
so has part: feature:11198718-11198810:1:exon
so has part: feature:11199057-11199107:1:exon
so has part: feature:11199948-11200034:1:exon
so has part: feature:11214198-11214314:1:exon
so has part: feature:11216782-11216844:1:exon
so has part: feature:11220994-11221067:1:exon
so has part: feature:11222163-11222244:1:exon
so has part: feature:11222796-11222861:1:exon
so has part: feature:11223513-11223566:1:exon
so has part: feature:11225196-11225258:1:exon
so has part: feature:11230477-11230585:1:exon
so has part: feature:11232073-11232155:1:exon
so has part: feature:11233610-11233647:1:exon
so has part: feature:11235881-11235965:1:exon
so has part: feature:11237639-11237752:1:exon
so has part: feature:11240131-11240184:1:exon

XP_034368995.1
type: Protein
SIO_000068: ncbiprotein

position:11170501:1
position: 11170501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11240184:1
position: 11240184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11170501-11170542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11173664-11173777:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11176897-11176991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11180656-11180767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11184371-11184469:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11186476-11186532:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11193647-11193747:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11198285-11198321:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11198718-11198810:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11199057-11199107:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11199948-11200034:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11214198-11214314:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11216782-11216844:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:11220994-11221067:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:11222163-11222244:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:11222796-11222861:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:11223513-11223566:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:11225196-11225258:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:11230477-11230585:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:11232073-11232155:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:11233610-11233647:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:11235881-11235965:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:11237639-11237752:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:11240131-11240184:1:exon

LOC117716165
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11249931..11266127)
location: region:11249931-11266127:-1
so has part: feature:11249931-11266127:-1:exon
subclass of: SO_0000010

117716165
type: Gene
SIO_000068: ncbigene

position:11249931:-1
position: 11249931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11266127:-1
position: 11266127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11249931-11266127:-1:exon

LOC117716165
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716165
product: 5-hydroxytryptamine receptor 5B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513105.1
SIO_010081: LOC117716165
subclass of: SO_0000673
so part of: LOC117716165
location: complement(join(11249931..11250361,11265183..11266127))
location: region:11249931-11266127:-1
so has part: feature:11265183-11266127:-1:exon
so has part: feature:11249931-11250361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11265183-11266127:-1:exon

position:11265183:-1
position: 11265183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11249931-11250361:-1:exon

position:11250361:-1
position: 11250361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117716165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 5B
translation: MEVSNLSGATPGIAFPPGPESCSDSPSSSPRSLGSTPDGLILPSRESPFSAFTVLVVTLLVLLIAATFLWNLLVLVTILRVRTFHRVPHNLVASTAVSDVLVAALVMPLSLVSELSAGRRWQLGRSLCHVWISFDVLCCTASIWNVAAIALDRYWTITRHLQYTLRTRRRASTLMIAITWALSALIALAPLLFGWGEAYDARLQRCQVSQEPSYAVFSTCGAFYLPLAVVLFVYWKIYKAAKFRFGRRRRAVVPLPATTQAKEAPQESEMVFTARCRATVTFQMSGDSWREQKEKRAAMMVGILIGVFVLCWIPFFLTELISPLCACSLPPIWKSIFLWLGYSNSFFNPLIYTAFNKNYNNAFKSLFTKQR
SIO_010081: LOC117716165
subclass of: SO_0000673
so part of: LOC117716165
location: complement(join(11250026..11250361,11265183..11265962))
location: region:11250026-11265962:-1
so has part: feature:11265183-11265962:-1:exon
so has part: feature:11250026-11250361:-1:exon

XP_034368996.1
type: Protein
SIO_000068: ncbiprotein

position:11250026:-1
position: 11250026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11265962:-1
position: 11265962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11265183-11265962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11250026-11250361:-1:exon

Ddx18
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ddx18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11293783..11308424)
location: region:11293783-11308424:-1
so has part: feature:11293783-11308424:-1:exon
subclass of: SO_0000010

117716497
type: Gene
SIO_000068: ncbigene

position:11293783:-1
position: 11293783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11308424:-1
position: 11308424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11293783-11308424:-1:exon

Ddx18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ddx18
product: DEAD-box helicase 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 mRNAs, 2 long SRA reads, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513539.1
SIO_010081: Ddx18
subclass of: SO_0000673
so part of: Ddx18
location: complement(join(11293783..11294085,11295182..11295359,11295668..11295724,11297191..11297304,11298286..11298438,11299006..11299167,11299992..11300131,11301252..11301566,11301656..11301756,11302035..11302170,11304370..11304480,11306148..11306441,11308240..11308424))
location: region:11293783-11308424:-1
so has part: feature:11308240-11308424:-1:exon
so has part: feature:11306148-11306441:-1:exon
so has part: feature:11304370-11304480:-1:exon
so has part: feature:11302035-11302170:-1:exon
so has part: feature:11301656-11301756:-1:exon
so has part: feature:11301252-11301566:-1:exon
so has part: feature:11299992-11300131:-1:exon
so has part: feature:11299006-11299167:-1:exon
so has part: feature:11298286-11298438:-1:exon
so has part: feature:11297191-11297304:-1:exon
so has part: feature:11295668-11295724:-1:exon
so has part: feature:11295182-11295359:-1:exon
so has part: feature:11293783-11294085:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11308240-11308424:-1:exon

position:11308240:-1
position: 11308240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11306148-11306441:-1:exon

position:11306148:-1
position: 11306148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11306441:-1
position: 11306441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11304370-11304480:-1:exon

position:11304370:-1
position: 11304370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11304480:-1
position: 11304480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11302035-11302170:-1:exon

position:11302035:-1
position: 11302035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11302170:-1
position: 11302170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11301656-11301756:-1:exon

position:11301656:-1
position: 11301656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11301756:-1
position: 11301756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11301252-11301566:-1:exon

position:11301252:-1
position: 11301252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11301566:-1
position: 11301566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11299992-11300131:-1:exon

position:11299992:-1
position: 11299992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11300131:-1
position: 11300131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11299006-11299167:-1:exon

position:11299006:-1
position: 11299006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11299167:-1
position: 11299167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11298286-11298438:-1:exon

position:11298286:-1
position: 11298286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11298438:-1
position: 11298438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11297191-11297304:-1:exon

position:11297191:-1
position: 11297191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11297304:-1
position: 11297304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11295668-11295724:-1:exon

position:11295668:-1
position: 11295668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11295724:-1
position: 11295724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11295182-11295359:-1:exon

position:11295182:-1
position: 11295182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11295359:-1
position: 11295359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:11293783-11294085:-1:exon

position:11294085:-1
position: 11294085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Ddx18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ddx18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX18
translation: MRGVQRYTSDLQLRTCICRSVQTAGRPGNMSQLQMKLLRKKIEKRNAKLRQRNLKLQEASDTSLSQPQNGDVPKETGKGGKAKKALKHSAPAGSAEAQSAAIPEETVENAKVKKSPQKLTTLPNGEAAAAAAPAPDSELKKKKKKKRKVANDAGPDAKKVKTEESAEACEEPEDAVKKADDSEVPSLPLGLTGAFEDTSFASLSNLVNENTLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQKLVNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPARRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQVALSFGFKVPPFVDLNVSSHDGKLKKRGGGGGFGYQKTKKVEKSKIFKHISKKPTDHRQFSH
SIO_010081: Ddx18
subclass of: SO_0000673
so part of: Ddx18
location: complement(join(11293943..11294085,11295182..11295359,11295668..11295724,11297191..11297304,11298286..11298438,11299006..11299167,11299992..11300131,11301252..11301566,11301656..11301756,11302035..11302170,11304370..11304480,11306148..11306441,11308240..11308411))
location: region:11293943-11308411:-1
so has part: feature:11308240-11308411:-1:exon
so has part: feature:11306148-11306441:-1:exon
so has part: feature:11304370-11304480:-1:exon
so has part: feature:11302035-11302170:-1:exon
so has part: feature:11301656-11301756:-1:exon
so has part: feature:11301252-11301566:-1:exon
so has part: feature:11299992-11300131:-1:exon
so has part: feature:11299006-11299167:-1:exon
so has part: feature:11298286-11298438:-1:exon
so has part: feature:11297191-11297304:-1:exon
so has part: feature:11295668-11295724:-1:exon
so has part: feature:11295182-11295359:-1:exon
so has part: feature:11293943-11294085:-1:exon

XP_034369430.1
type: Protein
SIO_000068: ncbiprotein

position:11293943:-1
position: 11293943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11308411:-1
position: 11308411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11308240-11308411:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11306148-11306441:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11304370-11304480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11302035-11302170:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11301656-11301756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11301252-11301566:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11299992-11300131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11299006-11299167:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11298286-11298438:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11297191-11297304:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11295668-11295724:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11295182-11295359:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:11293943-11294085:-1:exon

LOC117716440
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(11645922..11647108)
location: region:11645922-11647108:-1
so has part: feature:11645922-11647108:-1:exon

117716440
type: Gene
SIO_000068: ncbigene

position:11645922:-1
position: 11645922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11647108:-1
position: 11647108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11645922-11647108:-1:exon

LOC117716440
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716440
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716440
subclass of: SO_0000673
so part of: LOC117716440
location: complement(11645922..11647108)
location: region:11645922-11647108:-1
so has part: feature:11645922-11647108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11645922-11647108:-1:exon

LOC117716683
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716683
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 12132557..12132705
location: region:12132557-12132705:1
so has part: feature:12132557-12132705:1:exon

117716683
type: Gene
SIO_000068: ncbigene

position:12132557:1
position: 12132557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12132705:1
position: 12132705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12132557-12132705:1:exon

LOC117716683
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716683
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117716683
subclass of: SO_0000673
so part of: LOC117716683
location: 12132557..12132705
location: region:12132557-12132705:1
so has part: feature:12132557-12132705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12132557-12132705:1:exon

LOC117716441
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716441
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12684762..12686088)
location: region:12684762-12686088:-1
so has part: feature:12684762-12686088:-1:exon

117716441
type: Gene
SIO_000068: ncbigene

position:12684762:-1
position: 12684762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12686088:-1
position: 12686088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12684762-12686088:-1:exon

LOC117716441
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716441
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC117716441
subclass of: SO_0000673
so part of: LOC117716441
location: complement(12684762..12686088)
location: region:12684762-12686088:-1
so has part: feature:12684762-12686088:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12684762-12686088:-1:exon

Dpp10
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Dpp10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12851219..13551111)
location: region:12851219-13551111:-1
so has part: feature:12851219-13551111:-1:exon
subclass of: SO_0000010

117716123
type: Gene
SIO_000068: ncbigene

position:12851219:-1
position: 12851219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13551111:-1
position: 13551111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12851219-13551111:-1:exon

Dpp10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Dpp10
product: dipeptidyl peptidase like 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 mRNAs, 8 long SRA reads, 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513030.1
SIO_010081: Dpp10
subclass of: SO_0000673
so part of: Dpp10
location: complement(join(12851219..12853462,12855879..12855952,12859874..12859946,12860066..12860124,12860366..12860465,12871070..12871124,12871992..12872186,12892193..12892262,12892370..12892468,12901517..12901564,12902883..12903004,12908317..12908364,12908957..12909048,12924059..12924166,12928319..12928357,12937479..12937602,12947053..12947150,12956117..12956271,12966924..12967044,13011796..13011877,13011975..13012027,13185072..13185146,13215196..13215290,13368752..13368847,13392971..13393085,13550411..13551111))
location: region:12851219-13551111:-1
so has part: feature:13550411-13551111:-1:exon
so has part: feature:13392971-13393085:-1:exon
so has part: feature:13368752-13368847:-1:exon
so has part: feature:13215196-13215290:-1:exon
so has part: feature:13185072-13185146:-1:exon
so has part: feature:13011975-13012027:-1:exon
so has part: feature:13011796-13011877:-1:exon
so has part: feature:12966924-12967044:-1:exon
so has part: feature:12956117-12956271:-1:exon
so has part: feature:12947053-12947150:-1:exon
so has part: feature:12937479-12937602:-1:exon
so has part: feature:12928319-12928357:-1:exon
so has part: feature:12924059-12924166:-1:exon
so has part: feature:12908957-12909048:-1:exon
so has part: feature:12908317-12908364:-1:exon
so has part: feature:12902883-12903004:-1:exon
so has part: feature:12901517-12901564:-1:exon
so has part: feature:12892370-12892468:-1:exon
so has part: feature:12892193-12892262:-1:exon
so has part: feature:12871992-12872186:-1:exon
so has part: feature:12871070-12871124:-1:exon
so has part: feature:12860366-12860465:-1:exon
so has part: feature:12860066-12860124:-1:exon
so has part: feature:12859874-12859946:-1:exon
so has part: feature:12855879-12855952:-1:exon
so has part: feature:12851219-12853462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13550411-13551111:-1:exon

position:13550411:-1
position: 13550411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13392971-13393085:-1:exon

position:13392971:-1
position: 13392971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13393085:-1
position: 13393085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13368752-13368847:-1:exon

position:13368752:-1
position: 13368752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13368847:-1
position: 13368847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13215196-13215290:-1:exon

position:13215196:-1
position: 13215196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13215290:-1
position: 13215290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13185072-13185146:-1:exon

position:13185072:-1
position: 13185072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13185146:-1
position: 13185146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13011975-13012027:-1:exon

position:13011975:-1
position: 13011975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13012027:-1
position: 13012027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13011796-13011877:-1:exon

position:13011796:-1
position: 13011796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13011877:-1
position: 13011877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12966924-12967044:-1:exon

position:12966924:-1
position: 12966924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12967044:-1
position: 12967044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12956117-12956271:-1:exon

position:12956117:-1
position: 12956117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12956271:-1
position: 12956271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12947053-12947150:-1:exon

position:12947053:-1
position: 12947053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12947150:-1
position: 12947150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12937479-12937602:-1:exon

position:12937479:-1
position: 12937479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12937602:-1
position: 12937602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12928319-12928357:-1:exon

position:12928319:-1
position: 12928319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12928357:-1
position: 12928357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12924059-12924166:-1:exon

position:12924059:-1
position: 12924059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12924166:-1
position: 12924166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:12908957-12909048:-1:exon

position:12908957:-1
position: 12908957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12909048:-1
position: 12909048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:12908317-12908364:-1:exon

position:12908317:-1
position: 12908317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12908364:-1
position: 12908364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:12902883-12903004:-1:exon

position:12902883:-1
position: 12902883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12903004:-1
position: 12903004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:12901517-12901564:-1:exon

position:12901517:-1
position: 12901517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12901564:-1
position: 12901564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:12892370-12892468:-1:exon

position:12892370:-1
position: 12892370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12892468:-1
position: 12892468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:12892193-12892262:-1:exon

position:12892193:-1
position: 12892193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12892262:-1
position: 12892262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:12871992-12872186:-1:exon

position:12871992:-1
position: 12871992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12872186:-1
position: 12872186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:12871070-12871124:-1:exon

position:12871070:-1
position: 12871070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12871124:-1
position: 12871124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:12860366-12860465:-1:exon

position:12860366:-1
position: 12860366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12860465:-1
position: 12860465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:12860066-12860124:-1:exon

position:12860066:-1
position: 12860066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12860124:-1
position: 12860124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:12859874-12859946:-1:exon

position:12859874:-1
position: 12859874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12859946:-1
position: 12859946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:12855879-12855952:-1:exon

position:12855879:-1
position: 12855879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12855952:-1
position: 12855952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:12851219-12853462:-1:exon

position:12853462:-1
position: 12853462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Dpp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Dpp10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive dipeptidyl peptidase 10
translation: MTAMKQEQQPTPGARATQSQPADQELGSNSPPQRNWKGIAIALLVILVVCSLITMSVILLTPDELTNSSETRLSLEELLGKGFGLHNPEARWINDTDVVYKTNNGHVMKLNAETNVTTLLLDNSTFVTFKASRHSLSPDLKYVLLAYDVKQIFHYSFTASYLIYNIHTGEVWELNPPEVEDSVLQYAAWGVQGQQLIYIFENNIYYQPDIKSSSLRLTSSGKEGIIFNGIADWLYEEELLHSHIAHWWSPDGERLAFLMINDSLVPNMVIPRFTGALYPKAKQYPYPKAGQANPSVKLYVVNLYGPTHTLELMPPDIFKSREYYITMVKWVSNTRTVVRWLNRPQNISILTVCESTTGACSRKYEMTSDTWLSKQNEEPVFSRDGSRFFMTVPVKQGGRGEFHHIAMFLFQSKSEQITVRHLTSGNWEVIRILAYDETTQKIYFLSTEFSPRGRQLYSASTEGLLNRDCISCNFMKEDCTYFDASFSPMNQHFLLFCEGPKVPMVSLHNTEDPSKYSILERNSMMKETIQKKKLAKREIRILHIDDYELPLQLSLPKDFMEKNQYALLLIMDEEPGGQMVTDKFRVDWDSVLIDTDNVIVARFDGRGSGFQGLKVLQEIHRRIGSVEAKDQVAAVKYLLKQPYIDSKRLSIFGKGYGGYIASMILKSDEKFFKCGTVVAPISDMKLYASAFSERYLGMPSKEESTYQASSVLHNIHGLKEENLLIIHGTADTKVHFQHSAELIKHLIKAGVNYTLQVYPDEGYHISDKSKHHFYSTILRFFSDCLKEEVSVLPQEPEEDE
SIO_010081: Dpp10
subclass of: SO_0000673
so part of: Dpp10
location: complement(join(12853328..12853462,12855879..12855952,12859874..12859946,12860066..12860124,12860366..12860465,12871070..12871124,12871992..12872186,12892193..12892262,12892370..12892468,12901517..12901564,12902883..12903004,12908317..12908364,12908957..12909048,12924059..12924166,12928319..12928357,12937479..12937602,12947053..12947150,12956117..12956271,12966924..12967044,13011796..13011877,13011975..13012027,13185072..13185146,13215196..13215290,13368752..13368847,13392971..13393085,13550411..13550482))
location: region:12853328-13550482:-1
so has part: feature:13550411-13550482:-1:exon
so has part: feature:13392971-13393085:-1:exon
so has part: feature:13368752-13368847:-1:exon
so has part: feature:13215196-13215290:-1:exon
so has part: feature:13185072-13185146:-1:exon
so has part: feature:13011975-13012027:-1:exon
so has part: feature:13011796-13011877:-1:exon
so has part: feature:12966924-12967044:-1:exon
so has part: feature:12956117-12956271:-1:exon
so has part: feature:12947053-12947150:-1:exon
so has part: feature:12937479-12937602:-1:exon
so has part: feature:12928319-12928357:-1:exon
so has part: feature:12924059-12924166:-1:exon
so has part: feature:12908957-12909048:-1:exon
so has part: feature:12908317-12908364:-1:exon
so has part: feature:12902883-12903004:-1:exon
so has part: feature:12901517-12901564:-1:exon
so has part: feature:12892370-12892468:-1:exon
so has part: feature:12892193-12892262:-1:exon
so has part: feature:12871992-12872186:-1:exon
so has part: feature:12871070-12871124:-1:exon
so has part: feature:12860366-12860465:-1:exon
so has part: feature:12860066-12860124:-1:exon
so has part: feature:12859874-12859946:-1:exon
so has part: feature:12855879-12855952:-1:exon
so has part: feature:12853328-12853462:-1:exon

XP_034368921.1
type: Protein
SIO_000068: ncbiprotein

position:12853328:-1
position: 12853328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13550482:-1
position: 13550482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13550411-13550482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13392971-13393085:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13368752-13368847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13215196-13215290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13185072-13185146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13011975-13012027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13011796-13011877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12966924-12967044:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12956117-12956271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12947053-12947150:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12937479-12937602:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12928319-12928357:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12924059-12924166:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12908957-12909048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12908317-12908364:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12902883-12903004:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12901517-12901564:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12892370-12892468:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12892193-12892262:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12871992-12872186:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:12871070-12871124:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:12860366-12860465:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:12860066-12860124:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:12859874-12859946:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:12855879-12855952:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:12853328-12853462:-1:exon

LOC117716373
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716373
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13315072..13324773)
location: region:13315072-13324773:-1
so has part: feature:13315072-13324773:-1:exon

117716373
type: Gene
SIO_000068: ncbigene

position:13315072:-1
position: 13315072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13324773:-1
position: 13324773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13315072-13324773:-1:exon

LOC117716373
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716373
subclass of: SO_0000673
so part of: LOC117716373
location: complement(13315072..13315831)
location: region:13315072-13315831:-1
so has part: feature:13315072-13315831:-1:exon

position:13315831:-1
position: 13315831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13315072-13315831:-1:exon

LOC117716373
type: Exon
subclass of: SO_0000147
RO_0002162: 61156
gene: LOC117716373
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 7% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117716373
subclass of: SO_0000673
so part of: LOC117716373
location: complement(13324665..13324773)
location: region:13324665-13324773:-1
so has part: feature:13324665-13324773:-1:exon

position:13324665:-1
position: 13324665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13324665-13324773:-1:exon

LOC117716694
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716694
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 13901623..13901729
location: region:13901623-13901729:1
so has part: feature:13901623-13901729:1:exon
subclass of: SO_0000623

117716694
type: Gene
SIO_000068: ncbigene

position:13901623:1
position: 13901623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13901729:1
position: 13901729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13901623-13901729:1:exon

LOC117716694
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snRNA
gene: LOC117716694
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607792.1
SIO_010081: LOC117716694
subclass of: SO_0000673
so part of: LOC117716694
location: 13901623..13901729
location: region:13901623-13901729:1
so has part: feature:13901623-13901729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13901623-13901729:1:exon

LOC117716124
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 13933615..13935921
location: region:13933615-13935921:1
so has part: feature:13933615-13935921:1:exon
subclass of: SO_0000010

117716124
type: Gene
SIO_000068: ncbigene

position:13933615:1
position: 13933615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13935921:1
position: 13935921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13933615-13935921:1:exon

LOC117716124
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716124
product: protein BUD31 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513031.1
SIO_010081: LOC117716124
subclass of: SO_0000673
so part of: LOC117716124
location: join(13933615..13933649,13935149..13935921)
location: region:13933615-13935921:1
so has part: feature:13933615-13933649:1:exon
so has part: feature:13935149-13935921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13933615-13933649:1:exon

position:13933649:1
position: 13933649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13935149-13935921:1:exon

position:13935149:1
position: 13935149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117716124
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: LOC117716124
product: protein BUD31 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034513032.1
SIO_010081: LOC117716124
subclass of: SO_0000673
so part of: LOC117716124
location: join(13933682..13933787,13935149..13935921)
location: region:13933682-13935921:1
so has part: feature:13933682-13933787:1:exon
so has part: feature:13935149-13935921:1:exon

position:13933682:1
position: 13933682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13933682-13933787:1:exon

position:13933787:1
position: 13933787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13935149-13935921:1:exon

LOC117716124
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BUD31 homolog
translation: MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADTNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG
SIO_010081: LOC117716124
subclass of: SO_0000673
so part of: LOC117716124
location: 13935306..13935740
location: region:13935306-13935740:1
so has part: feature:13935306-13935740:1:exon

XP_034368922.1
type: Protein
SIO_000068: ncbiprotein

position:13935306:1
position: 13935306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13935740:1
position: 13935740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13935306-13935740:1:exon

LOC117716124
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: LOC117716124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BUD31 homolog
translation: MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAISRELYEYCIKEGYADTNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG
SIO_010081: LOC117716124
subclass of: SO_0000673
so part of: LOC117716124
location: 13935306..13935740
location: region:13935306-13935740:1
so has part: feature:13935306-13935740:1:exon

XP_034368923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13935306-13935740:1:exon

Actr3
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Actr3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14782377..14825878)
location: region:14782377-14825878:-1
so has part: feature:14782377-14825878:-1:exon
subclass of: SO_0000010

117716097
type: Gene
SIO_000068: ncbigene

position:14782377:-1
position: 14782377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14825878:-1
position: 14825878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14782377-14825878:-1:exon

Actr3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Actr3
product: actin related protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 mRNAs, 1 long SRA read, 26 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034512974.1
SIO_010081: Actr3
subclass of: SO_0000673
so part of: Actr3
location: complement(join(14782377..14783555,14784509..14784592,14786404..14786529,14786733..14786825,14792452..14792625,14796267..14796410,14797663..14797770,14799007..14799102,14801177..14801287,14806319..14806443,14808323..14808378,14825445..14825878))
location: region:14782377-14825878:-1
so has part: feature:14825445-14825878:-1:exon
so has part: feature:14808323-14808378:-1:exon
so has part: feature:14806319-14806443:-1:exon
so has part: feature:14801177-14801287:-1:exon
so has part: feature:14799007-14799102:-1:exon
so has part: feature:14797663-14797770:-1:exon
so has part: feature:14796267-14796410:-1:exon
so has part: feature:14792452-14792625:-1:exon
so has part: feature:14786733-14786825:-1:exon
so has part: feature:14786404-14786529:-1:exon
so has part: feature:14784509-14784592:-1:exon
so has part: feature:14782377-14783555:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14825445-14825878:-1:exon

position:14825445:-1
position: 14825445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14808323-14808378:-1:exon

position:14808323:-1
position: 14808323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14808378:-1
position: 14808378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14806319-14806443:-1:exon

position:14806319:-1
position: 14806319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14806443:-1
position: 14806443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14801177-14801287:-1:exon

position:14801177:-1
position: 14801177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14801287:-1
position: 14801287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14799007-14799102:-1:exon

position:14799007:-1
position: 14799007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14799102:-1
position: 14799102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14797663-14797770:-1:exon

position:14797663:-1
position: 14797663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14797770:-1
position: 14797770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14796267-14796410:-1:exon

position:14796267:-1
position: 14796267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14796410:-1
position: 14796410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14792452-14792625:-1:exon

position:14792452:-1
position: 14792452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14792625:-1
position: 14792625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14786733-14786825:-1:exon

position:14786733:-1
position: 14786733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14786825:-1
position: 14786825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14786404-14786529:-1:exon

position:14786404:-1
position: 14786404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14786529:-1
position: 14786529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14784509-14784592:-1:exon

position:14784509:-1
position: 14784509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14784592:-1
position: 14784592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14782377-14783555:-1:exon

position:14783555:-1
position: 14783555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Actr3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Actr3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 3
translation: MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
SIO_010081: Actr3
subclass of: SO_0000673
so part of: Actr3
location: complement(join(14783460..14783555,14784509..14784592,14786404..14786529,14786733..14786825,14792452..14792625,14796267..14796410,14797663..14797770,14799007..14799102,14801177..14801287,14806319..14806443,14808323..14808378,14825445..14825488))
location: region:14783460-14825488:-1
so has part: feature:14825445-14825488:-1:exon
so has part: feature:14808323-14808378:-1:exon
so has part: feature:14806319-14806443:-1:exon
so has part: feature:14801177-14801287:-1:exon
so has part: feature:14799007-14799102:-1:exon
so has part: feature:14797663-14797770:-1:exon
so has part: feature:14796267-14796410:-1:exon
so has part: feature:14792452-14792625:-1:exon
so has part: feature:14786733-14786825:-1:exon
so has part: feature:14786404-14786529:-1:exon
so has part: feature:14784509-14784592:-1:exon
so has part: feature:14783460-14783555:-1:exon

XP_034368865.1
type: Protein
SIO_000068: ncbiprotein

position:14783460:-1
position: 14783460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14825488:-1
position: 14825488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14825445-14825488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14808323-14808378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14806319-14806443:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14801177-14801287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14799007-14799102:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14797663-14797770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14796267-14796410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14792452-14792625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14786733-14786825:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14786404-14786529:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14784509-14784592:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14783460-14783555:-1:exon

Slc35f5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Slc35f5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14950773..14982985
location: region:14950773-14982985:1
so has part: feature:14950773-14982985:1:exon
subclass of: SO_0000010

117716301
type: Gene
SIO_000068: ncbigene

position:14950773:1
position: 14950773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14982985:1
position: 14982985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14950773-14982985:1:exon

Slc35f5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc35f5
product: solute carrier family 35 member F5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 3 long SRA reads, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034513318.1
SIO_010081: Slc35f5
subclass of: SO_0000673
so part of: Slc35f5
location: join(14950773..14951051,14952512..14952602,14952733..14952874,14956689..14956832,14958783..14958845,14961107..14961188,14962661..14962851,14964970..14965051,14966466..14966553,14969974..14970038,14971935..14972039,14972686..14972845,14975334..14975424,14977719..14977873,14978356..14978452,14982041..14982985)
location: region:14950773-14982985:1
so has part: feature:14950773-14951051:1:exon
so has part: feature:14952512-14952602:1:exon
so has part: feature:14952733-14952874:1:exon
so has part: feature:14956689-14956832:1:exon
so has part: feature:14958783-14958845:1:exon
so has part: feature:14961107-14961188:1:exon
so has part: feature:14962661-14962851:1:exon
so has part: feature:14964970-14965051:1:exon
so has part: feature:14966466-14966553:1:exon
so has part: feature:14969974-14970038:1:exon
so has part: feature:14971935-14972039:1:exon
so has part: feature:14972686-14972845:1:exon
so has part: feature:14975334-14975424:1:exon
so has part: feature:14977719-14977873:1:exon
so has part: feature:14978356-14978452:1:exon
so has part: feature:14982041-14982985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14950773-14951051:1:exon

position:14951051:1
position: 14951051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14952512-14952602:1:exon

position:14952512:1
position: 14952512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14952602:1
position: 14952602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14952733-14952874:1:exon

position:14952733:1
position: 14952733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14952874:1
position: 14952874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14956689-14956832:1:exon

position:14956689:1
position: 14956689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14956832:1
position: 14956832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14958783-14958845:1:exon

position:14958783:1
position: 14958783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14958845:1
position: 14958845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14961107-14961188:1:exon

position:14961107:1
position: 14961107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14961188:1
position: 14961188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14962661-14962851:1:exon

position:14962661:1
position: 14962661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14962851:1
position: 14962851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14964970-14965051:1:exon

position:14964970:1
position: 14964970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14965051:1
position: 14965051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14966466-14966553:1:exon

position:14966466:1
position: 14966466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14966553:1
position: 14966553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:14969974-14970038:1:exon

position:14969974:1
position: 14969974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14970038:1
position: 14970038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:14971935-14972039:1:exon

position:14971935:1
position: 14971935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14972039:1
position: 14972039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:14972686-14972845:1:exon

position:14972686:1
position: 14972686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14972845:1
position: 14972845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:14975334-14975424:1:exon

position:14975334:1
position: 14975334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14975424:1
position: 14975424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:14977719-14977873:1:exon

position:14977719:1
position: 14977719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14977873:1
position: 14977873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14978356-14978452:1:exon

position:14978356:1
position: 14978356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14978452:1
position: 14978452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:14982041-14982985:1:exon

position:14982041:1
position: 14982041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Slc35f5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: Slc35f5
product: solute carrier family 35 member F5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004607741.1
SIO_010081: Slc35f5
so part of: Slc35f5
location: join(14950942..14951051,14952512..14952602,14952733..14952874,14956689..14956832,14958783..14958845,14961107..14961188,14962661..14962851,14964970..14965051,14966466..14966553,14969974..14970038,14971935..14972039,14972686..14972845,14975334..14975424,14977747..14977873,14978356..14978406)
location: region:14950942-14978406:1
so has part: feature:14950942-14951051:1:exon
so has part: feature:14952512-14952602:1:exon
so has part: feature:14952733-14952874:1:exon
so has part: feature:14956689-14956832:1:exon
so has part: feature:14958783-14958845:1:exon
so has part: feature:14961107-14961188:1:exon
so has part: feature:14962661-14962851:1:exon
so has part: feature:14964970-14965051:1:exon
so has part: feature:14966466-14966553:1:exon
so has part: feature:14969974-14970038:1:exon
so has part: feature:14971935-14972039:1:exon
so has part: feature:14972686-14972845:1:exon
so has part: feature:14975334-14975424:1:exon
so has part: feature:14977747-14977873:1:exon
so has part: feature:14978356-14978406:1:exon

position:14950942:1
position: 14950942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14978406:1
position: 14978406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14950942-14951051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14952512-14952602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14952733-14952874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14956689-14956832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14958783-14958845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14961107-14961188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14962661-14962851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14964970-14965051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14966466-14966553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14969974-14970038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14971935-14972039:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14972686-14972845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14975334-14975424:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14977747-14977873:1:exon

position:14977747:1
position: 14977747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14978356-14978406:1:exon

Slc35f5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc35f5
product: solute carrier family 35 member F5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034513317.1
SIO_010081: Slc35f5
subclass of: SO_0000673
so part of: Slc35f5
location: join(14950944..14951051,14952512..14952602,14952733..14952874,14956689..14956832,14958783..14958845,14961107..14961188,14962661..14962851,14964970..14965051,14966466..14966553,14969974..14970038,14971935..14972039,14972686..14972845,14975334..14975424,14977825..14977873,14978356..14978452,14982041..14982985)
location: region:14950944-14982985:1
so has part: feature:14950944-14951051:1:exon
so has part: feature:14952512-14952602:1:exon
so has part: feature:14952733-14952874:1:exon
so has part: feature:14956689-14956832:1:exon
so has part: feature:14958783-14958845:1:exon
so has part: feature:14961107-14961188:1:exon
so has part: feature:14962661-14962851:1:exon
so has part: feature:14964970-14965051:1:exon
so has part: feature:14966466-14966553:1:exon
so has part: feature:14969974-14970038:1:exon
so has part: feature:14971935-14972039:1:exon
so has part: feature:14972686-14972845:1:exon
so has part: feature:14975334-14975424:1:exon
so has part: feature:14977825-14977873:1:exon
so has part: feature:14978356-14978452:1:exon
so has part: feature:14982041-14982985:1:exon

position:14950944:1
position: 14950944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14950944-14951051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14952512-14952602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14952733-14952874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14956689-14956832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14958783-14958845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14961107-14961188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14962661-14962851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14964970-14965051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14966466-14966553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14969974-14970038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14971935-14972039:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14972686-14972845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14975334-14975424:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14977825-14977873:1:exon

position:14977825:1
position: 14977825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:14978356-14978452:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14982041-14982985:1:exon

Slc35f5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc35f5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 35 member F5 isoform X1
translation: MGRMTPSWWTSWGPRVSRMGFRVLGAVPVHRDVRSGGLSSSPLFRLRSAQFAGIAFEDLRDALATRLQMVYVFIMNRVNSQSSGFSQRRRMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQCTRGFRGKPAAFFADAEGYFAACTTDTSMSSSLSEPLYVPVKFHDLPSEKLESTNIGTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSYPTVKDQESILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLAGAMFYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLLCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKESEEFLPLYAENIEFREFQKTVNSVRASFLCTAFLRRMELLSCCGLESSLMEHSTVKRQSGKFFVEVFQCLV
SIO_010081: Slc35f5
subclass of: SO_0000673
so part of: Slc35f5
location: join(14950946..14951051,14952512..14952602,14952733..14952874,14956689..14956832,14958783..14958845,14961107..14961188,14962661..14962851,14964970..14965051,14966466..14966553,14969974..14970038,14971935..14972039,14972686..14972845,14975334..14975424,14977825..14977873,14978356..14978452,14982041..14982113)
location: region:14950946-14982113:1
so has part: feature:14950946-14951051:1:exon
so has part: feature:14952512-14952602:1:exon
so has part: feature:14952733-14952874:1:exon
so has part: feature:14956689-14956832:1:exon
so has part: feature:14958783-14958845:1:exon
so has part: feature:14961107-14961188:1:exon
so has part: feature:14962661-14962851:1:exon
so has part: feature:14964970-14965051:1:exon
so has part: feature:14966466-14966553:1:exon
so has part: feature:14969974-14970038:1:exon
so has part: feature:14971935-14972039:1:exon
so has part: feature:14972686-14972845:1:exon
so has part: feature:14975334-14975424:1:exon
so has part: feature:14977825-14977873:1:exon
so has part: feature:14978356-14978452:1:exon
so has part: feature:14982041-14982113:1:exon

XP_034369208.1
type: Protein
SIO_000068: ncbiprotein

position:14950946:1
position: 14950946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14982113:1
position: 14982113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14950946-14951051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14952512-14952602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14952733-14952874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14956689-14956832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14958783-14958845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14961107-14961188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14962661-14962851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14964970-14965051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14966466-14966553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14969974-14970038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14971935-14972039:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14972686-14972845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14975334-14975424:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14977825-14977873:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14978356-14978452:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14982041-14982113:1:exon

Slc35f5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc35f5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 35 member F5 isoform X2
translation: MGRMTPSWWTSWGPRVSRMGFRVLGAVPVHRDVRSGGLSSSPLFRLRSAQFAGIAFEDLRDALATRLQMVYVFIMNRVNSQSSGFSQRRRMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQCTRGFRGKPAAFFADAEGYFAACTTDTSMSSSLSEPLYVPVKFHDLPSEKLESTNIGTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSYPTVKDQESILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLAGAMFYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLLCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGVRRVFAFICRKHRIQRVPEDSEQCESLISMHSVSQEDGAT
SIO_010081: Slc35f5
subclass of: SO_0000673
so part of: Slc35f5
location: join(14950946..14951051,14952512..14952602,14952733..14952874,14956689..14956832,14958783..14958845,14961107..14961188,14962661..14962851,14964970..14965051,14966466..14966553,14969974..14970038,14971935..14972039,14972686..14972845,14975334..14975424,14977719..14977873,14978356..14978431)
location: region:14950946-14978431:1
so has part: feature:14950946-14951051:1:exon
so has part: feature:14952512-14952602:1:exon
so has part: feature:14952733-14952874:1:exon
so has part: feature:14956689-14956832:1:exon
so has part: feature:14958783-14958845:1:exon
so has part: feature:14961107-14961188:1:exon
so has part: feature:14962661-14962851:1:exon
so has part: feature:14964970-14965051:1:exon
so has part: feature:14966466-14966553:1:exon
so has part: feature:14969974-14970038:1:exon
so has part: feature:14971935-14972039:1:exon
so has part: feature:14972686-14972845:1:exon
so has part: feature:14975334-14975424:1:exon
so has part: feature:14977719-14977873:1:exon
so has part: feature:14978356-14978431:1:exon

XP_034369209.1
type: Protein
SIO_000068: ncbiprotein

position:14978431:1
position: 14978431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14950946-14951051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14952512-14952602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14952733-14952874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14956689-14956832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14958783-14958845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14961107-14961188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14962661-14962851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14964970-14965051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14966466-14966553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14969974-14970038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14971935-14972039:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14972686-14972845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14975334-14975424:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14977719-14977873:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14978356-14978431:1:exon

Slc35f5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Slc35f5
product: solute carrier family 35 member F5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 mRNAs, 4 long SRA reads, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034513319.1
SIO_010081: Slc35f5
subclass of: SO_0000673
so part of: Slc35f5
location: join(14951193..14951512,14952512..14952602,14952733..14952874,14956689..14956832,14958783..14958845,14961107..14961188,14962661..14962851,14964970..14965051,14966466..14966553,14969974..14970038,14971935..14972039,14972686..14972845,14975334..14975424,14977719..14977873,14978356..14978452,14982041..14982932)
location: region:14951193-14982932:1
so has part: feature:14951193-14951512:1:exon
so has part: feature:14952512-14952602:1:exon
so has part: feature:14952733-14952874:1:exon
so has part: feature:14956689-14956832:1:exon
so has part: feature:14958783-14958845:1:exon
so has part: feature:14961107-14961188:1:exon
so has part: feature:14962661-14962851:1:exon
so has part: feature:14964970-14965051:1:exon
so has part: feature:14966466-14966553:1:exon
so has part: feature:14969974-14970038:1:exon
so has part: feature:14971935-14972039:1:exon
so has part: feature:14972686-14972845:1:exon
so has part: feature:14975334-14975424:1:exon
so has part: feature:14977719-14977873:1:exon
so has part: feature:14978356-14978452:1:exon
so has part: feature:14982041-14982932:1:exon

position:14951193:1
position: 14951193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14982932:1
position: 14982932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14951193-14951512:1:exon

position:14951512:1
position: 14951512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14952512-14952602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14952733-14952874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14956689-14956832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14958783-14958845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14961107-14961188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14962661-14962851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14964970-14965051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14966466-14966553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14969974-14970038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14971935-14972039:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14972686-14972845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14975334-14975424:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14977719-14977873:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14978356-14978452:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:14982041-14982932:1:exon

Slc35f5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Slc35f5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 35 member F5 isoform X3
translation: MVPPRLHRGAGRPGGLSSSPLFRLRSAQFAGIAFEDLRDALATRLQMVYVFIMNRVNSQSSGFSQRRRMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYLLGFIIWKPWRQQCTRGFRGKPAAFFADAEGYFAACTTDTSMSSSLSEPLYVPVKFHDLPSEKLESTNIGTEKTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSYPTVKDQESILKTVGKLTATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVILSIGGVVLVNLSGSEKSAGRDTIGSIWSLAGAMFYAVYIVMIKRKVDREDKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFEDFEFPNKVVLLCIIINGLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTLLCHYNNWDPVMVGVRRVFAFICRKHRIQRVPEDSEQCESLISMHSVSQEDGAT
SIO_010081: Slc35f5
subclass of: SO_0000673
so part of: Slc35f5
location: join(14951473..14951512,14952512..14952602,14952733..14952874,14956689..14956832,14958783..14958845,14961107..14961188,14962661..14962851,14964970..14965051,14966466..14966553,14969974..14970038,14971935..14972039,14972686..14972845,14975334..14975424,14977719..14977873,14978356..14978431)
location: region:14951473-14978431:1
so has part: feature:14951473-14951512:1:exon
so has part: feature:14952512-14952602:1:exon
so has part: feature:14952733-14952874:1:exon
so has part: feature:14956689-14956832:1:exon
so has part: feature:14958783-14958845:1:exon
so has part: feature:14961107-14961188:1:exon
so has part: feature:14962661-14962851:1:exon
so has part: feature:14964970-14965051:1:exon
so has part: feature:14966466-14966553:1:exon
so has part: feature:14969974-14970038:1:exon
so has part: feature:14971935-14972039:1:exon
so has part: feature:14972686-14972845:1:exon
so has part: feature:14975334-14975424:1:exon
so has part: feature:14977719-14977873:1:exon
so has part: feature:14978356-14978431:1:exon

XP_034369210.1
type: Protein
SIO_000068: ncbiprotein

position:14951473:1
position: 14951473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14951473-14951512:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14952512-14952602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14952733-14952874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14956689-14956832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14958783-14958845:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14961107-14961188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14962661-14962851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14964970-14965051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:14966466-14966553:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14969974-14970038:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:14971935-14972039:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:14972686-14972845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:14975334-14975424:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:14977719-14977873:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14978356-14978431:1:exon

Gpr39
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Gpr39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15053734..15262100
location: region:15053734-15262100:1
so has part: feature:15053734-15262100:1:exon
subclass of: SO_0000010

117716322
type: Gene
SIO_000068: ncbigene

position:15053734:1
position: 15053734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15262100:1
position: 15262100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15053734-15262100:1:exon

Gpr39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Gpr39
product: G protein-coupled receptor 39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 Proteins, and 43% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513353.1
SIO_010081: Gpr39
subclass of: SO_0000673
so part of: Gpr39
location: join(15053734..15054946,15260636..15262100)
location: region:15053734-15262100:1
so has part: feature:15053734-15054946:1:exon
so has part: feature:15260636-15262100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15053734-15054946:1:exon

position:15054946:1
position: 15054946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15260636-15262100:1:exon

position:15260636:1
position: 15260636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Gpr39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Gpr39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 39
translation: MASSSGSSNICSHVIDHSHVPEFEVATWIKITLFLVYLIIFVVGILGNSVTIRVTQVLQKKGYLQKEVTDHMVSLACSDILVFLIGMPMEFYSIIWNPLTTPSYALSCKLHTFLFEMCSYATLLHVLTLSFERYIAICHPFRYKAVSGPCQVKLLIGFVWVTSTLVALPLLFAMGIEYPLVNVPTHKGLKCNLSRTRNHNQLANSSMSICTNLSNRWEVFQSSIFGAFAVYLVVLVSVAFMCWNMMKVLMKSKRGTLAGTGPQLQLRKAESEESRTARRQTIIFLRLIVVTLAVCWMPNQIRRIMAAAKPKHDWTKSYFKAYMILLPFSDTFFYLSSVVNPLLYNVSSQQFRKVFWQVLCCRLTLQHANQEKRLRAQFSSTKNSTSSTRSPLIFLASRRSNSSSRRTNKVFLSTFQAEAKPLEAKPQPLSPESPQTGSETEPAGSTTEHSLQEQEV
SIO_010081: Gpr39
subclass of: SO_0000673
so part of: Gpr39
location: join(15054091..15054946,15260636..15261150)
location: region:15054091-15261150:1
so has part: feature:15054091-15054946:1:exon
so has part: feature:15260636-15261150:1:exon

XP_034369244.1
type: Protein
SIO_000068: ncbiprotein

position:15054091:1
position: 15054091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15261150:1
position: 15261150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15054091-15054946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15260636-15261150:1:exon

Lypd1
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Lypd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15260163..15301486)
location: region:15260163-15301486:-1
so has part: feature:15260163-15301486:-1:exon
subclass of: SO_0000010

117716323
type: Gene
SIO_000068: ncbigene

position:15260163:-1
position: 15260163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15301486:-1
position: 15301486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15260163-15301486:-1:exon

Lypd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lypd1
product: LY6/PLAUR domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 4 long SRA reads, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034513354.1
SIO_010081: Lypd1
subclass of: SO_0000673
so part of: Lypd1
location: complement(join(15260163..15261822,15299643..15299780,15301095..15301486))
location: region:15260163-15301486:-1
so has part: feature:15301095-15301486:-1:exon
so has part: feature:15299643-15299780:-1:exon
so has part: feature:15260163-15261822:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15301095-15301486:-1:exon

position:15301095:-1
position: 15301095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15299643-15299780:-1:exon

position:15299643:-1
position: 15299643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15299780:-1
position: 15299780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15260163-15261822:-1:exon

position:15261822:-1
position: 15261822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Lypd1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Lypd1
product: LY6/PLAUR domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513355.1
SIO_010081: Lypd1
subclass of: SO_0000673
so part of: Lypd1
location: complement(join(15260163..15261822,15299643..15299780,15301095..15301124,15301252..15301442))
location: region:15260163-15301442:-1
so has part: feature:15301252-15301442:-1:exon
so has part: feature:15301095-15301124:-1:exon
so has part: feature:15299643-15299780:-1:exon
so has part: feature:15260163-15261822:-1:exon

position:15301442:-1
position: 15301442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15301252-15301442:-1:exon

position:15301252:-1
position: 15301252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15301095-15301124:-1:exon

position:15301124:-1
position: 15301124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15299643-15299780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15260163-15261822:-1:exon

Lypd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lypd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ly6/PLAUR domain-containing protein 1 isoform X2
translation: MRAPRATPAAPLGGSRRLGGSSATTFCGLFWLPGLALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQSAGILYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASAIRPGLLTTVLFFNLALCLAHC
SIO_010081: Lypd1
subclass of: SO_0000673
so part of: Lypd1
location: complement(join(15261587..15261822,15299643..15299780,15301095..15301124,15301252..15301321))
location: region:15261587-15301321:-1
so has part: feature:15301252-15301321:-1:exon
so has part: feature:15301095-15301124:-1:exon
so has part: feature:15299643-15299780:-1:exon
so has part: feature:15261587-15261822:-1:exon

XP_034369246.1
type: Protein
SIO_000068: ncbiprotein

position:15261587:-1
position: 15261587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15301321:-1
position: 15301321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15301252-15301321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15301095-15301124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15299643-15299780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15261587-15261822:-1:exon

Lypd1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Lypd1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ly6/PLAUR domain-containing protein 1 isoform X1
translation: MWVLGIAATFCGLFWLPGLALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQSAGILYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASAIRPGLLTTVLFFNLALCLAHC
SIO_010081: Lypd1
subclass of: SO_0000673
so part of: Lypd1
location: complement(join(15261587..15261822,15299643..15299780,15301095..15301146))
location: region:15261587-15301146:-1
so has part: feature:15301095-15301146:-1:exon
so has part: feature:15299643-15299780:-1:exon
so has part: feature:15261587-15261822:-1:exon

XP_034369245.1
type: Protein
SIO_000068: ncbiprotein

position:15301146:-1
position: 15301146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15301095-15301146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15299643-15299780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15261587-15261822:-1:exon

Nckap5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Nckap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15329440..16069135)
location: region:15329440-16069135:-1
so has part: feature:15329440-16069135:-1:exon
subclass of: SO_0000010

117716616
type: Gene
SIO_000068: ncbigene

position:15329440:-1
position: 15329440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16069135:-1
position: 16069135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15329440-16069135:-1:exon

Nckap5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Nckap5
product: NCK associated protein 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034513697.1
SIO_010081: Nckap5
subclass of: SO_0000673
so part of: Nckap5
location: complement(join(15329440..15329497,15365170..15365306,15369548..15369862,15403525..15403603,15491470..15491589,15499390..15499428,15512146..15512214,15605443..15605592,15642797..15642884,15762080..15762213,15819863..15819926,15903004..15903077,16069067..16069135))
location: region:15329440-16069135:-1
so has part: feature:16069067-16069135:-1:exon
so has part: feature:15903004-15903077:-1:exon
so has part: feature:15819863-15819926:-1:exon
so has part: feature:15762080-15762213:-1:exon
so has part: feature:15642797-15642884:-1:exon
so has part: feature:15605443-15605592:-1:exon
so has part: feature:15512146-15512214:-1:exon
so has part: feature:15499390-15499428:-1:exon
so has part: feature:15491470-15491589:-1:exon
so has part: feature:15403525-15403603:-1:exon
so has part: feature:15369548-15369862:-1:exon
so has part: feature:15365170-15365306:-1:exon
so has part: feature:15329440-15329497:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16069067-16069135:-1:exon

position:16069067:-1
position: 16069067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15903004-15903077:-1:exon

position:15903004:-1
position: 15903004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15903077:-1
position: 15903077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15819863-15819926:-1:exon

position:15819863:-1
position: 15819863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15819926:-1
position: 15819926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15762080-15762213:-1:exon

position:15762080:-1
position: 15762080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15762213:-1
position: 15762213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15642797-15642884:-1:exon

position:15642797:-1
position: 15642797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15642884:-1
position: 15642884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15605443-15605592:-1:exon

position:15605443:-1
position: 15605443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15605592:-1
position: 15605592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15512146-15512214:-1:exon

position:15512146:-1
position: 15512146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15512214:-1
position: 15512214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15499390-15499428:-1:exon

position:15499390:-1
position: 15499390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15499428:-1
position: 15499428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15491470-15491589:-1:exon

position:15491470:-1
position: 15491470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15491589:-1
position: 15491589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:15403525-15403603:-1:exon

position:15403525:-1
position: 15403525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15403603:-1
position: 15403603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:15369548-15369862:-1:exon

position:15369548:-1
position: 15369548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15369862:-1
position: 15369862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:15365170-15365306:-1:exon

position:15365170:-1
position: 15365170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15365306:-1
position: 15365306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:15329440-15329497:-1:exon

position:15329497:-1
position: 15329497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Nckap5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Nckap5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nck-associated protein 5
translation: MEGKRQLDRRDFGKRLSLDSSLVEYMDSNKCIEHLLAQLREQHRSLWREKLAVARLQREVAQRTSQGAMQEKLIHELEEERHLRLQSEERLREVTLESERNRIQMRGLQQQFSRMEETVRSLLQSQGSPEQKKEEPAKITAYQERVSEEERKEQAALGDLHVAADEDSRSEHSSVEEGKEDSRLLLKRLKALEAENSALALENENQREQYERCLDEVANQVVRALLTQKDLREECVKLKTRVFDLEQQNRALSILFQQRVRPASDVLLQGPEVDEDVREDEEDRVADATVQSHVIESNCQMRTLDSGIGTFPLPDSGNRSIGRYICQQDSPEDTDPLLPLQPAPSVASPARAQTLDREVPSSSDSQSSSESTIVHSISDPSMMARGMRASQSHLPKPTSSGKSSFEKPNGAESKAHTGPSFEYAEDAVASEPLSEWRGEDATTETQVVVTPHPESPVE
SIO_010081: Nckap5
subclass of: SO_0000673
so part of: Nckap5
location: complement(join(15329459..15329497,15365170..15365306,15369548..15369862,15403525..15403603,15491470..15491589,15499390..15499428,15512146..15512214,15605443..15605592,15642797..15642884,15762080..15762213,15819863..15819926,15903004..15903077,16069067..16069135))
location: region:15329459-16069135:-1
so has part: feature:16069067-16069135:-1:exon
so has part: feature:15903004-15903077:-1:exon
so has part: feature:15819863-15819926:-1:exon
so has part: feature:15762080-15762213:-1:exon
so has part: feature:15642797-15642884:-1:exon
so has part: feature:15605443-15605592:-1:exon
so has part: feature:15512146-15512214:-1:exon
so has part: feature:15499390-15499428:-1:exon
so has part: feature:15491470-15491589:-1:exon
so has part: feature:15403525-15403603:-1:exon
so has part: feature:15369548-15369862:-1:exon
so has part: feature:15365170-15365306:-1:exon
so has part: feature:15329459-15329497:-1:exon

XP_034369588.1
type: Protein
SIO_000068: ncbiprotein

position:15329459:-1
position: 15329459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16069067-16069135:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:15903004-15903077:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15819863-15819926:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15762080-15762213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15642797-15642884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15605443-15605592:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15512146-15512214:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15499390-15499428:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15491470-15491589:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15403525-15403603:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15369548-15369862:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15365170-15365306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15329459-15329497:-1:exon

Mgat5
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Mgat5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 16535423..16819787
location: region:16535423-16819787:1
so has part: feature:16535423-16819787:1:exon
subclass of: SO_0000010

117716135
type: Gene
SIO_000068: ncbigene

position:16535423:1
position: 16535423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16819787:1
position: 16819787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16535423-16819787:1:exon

Mgat5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mgat5
product: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 2 long SRA reads, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513054.1
SIO_010081: Mgat5
subclass of: SO_0000673
so part of: Mgat5
location: join(16535423..16535755,16583538..16583587,16638395..16638775,16655202..16655363,16698042..16698118,16699274..16699363,16716737..16716808,16719205..16719366,16722007..16722176,16725283..16725417,16732021..16732154,16745118..16745251,16781595..16781744,16791409..16791555,16800672..16800788,16802979..16803053,16810824..16810981,16813993..16819787)
location: region:16535423-16819787:1
so has part: feature:16535423-16535755:1:exon
so has part: feature:16583538-16583587:1:exon
so has part: feature:16638395-16638775:1:exon
so has part: feature:16655202-16655363:1:exon
so has part: feature:16698042-16698118:1:exon
so has part: feature:16699274-16699363:1:exon
so has part: feature:16716737-16716808:1:exon
so has part: feature:16719205-16719366:1:exon
so has part: feature:16722007-16722176:1:exon
so has part: feature:16725283-16725417:1:exon
so has part: feature:16732021-16732154:1:exon
so has part: feature:16745118-16745251:1:exon
so has part: feature:16781595-16781744:1:exon
so has part: feature:16791409-16791555:1:exon
so has part: feature:16800672-16800788:1:exon
so has part: feature:16802979-16803053:1:exon
so has part: feature:16810824-16810981:1:exon
so has part: feature:16813993-16819787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16535423-16535755:1:exon

position:16535755:1
position: 16535755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16583538-16583587:1:exon

position:16583538:1
position: 16583538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16583587:1
position: 16583587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16638395-16638775:1:exon

position:16638395:1
position: 16638395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16638775:1
position: 16638775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16655202-16655363:1:exon

position:16655202:1
position: 16655202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16655363:1
position: 16655363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16698042-16698118:1:exon

position:16698042:1
position: 16698042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16698118:1
position: 16698118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16699274-16699363:1:exon

position:16699274:1
position: 16699274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16699363:1
position: 16699363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16716737-16716808:1:exon

position:16716737:1
position: 16716737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16716808:1
position: 16716808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16719205-16719366:1:exon

position:16719205:1
position: 16719205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16719366:1
position: 16719366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:16722007-16722176:1:exon

position:16722007:1
position: 16722007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16722176:1
position: 16722176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16725283-16725417:1:exon

position:16725283:1
position: 16725283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16725417:1
position: 16725417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:16732021-16732154:1:exon

position:16732021:1
position: 16732021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16732154:1
position: 16732154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:16745118-16745251:1:exon

position:16745118:1
position: 16745118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16745251:1
position: 16745251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:16781595-16781744:1:exon

position:16781595:1
position: 16781595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16781744:1
position: 16781744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:16791409-16791555:1:exon

position:16791409:1
position: 16791409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16791555:1
position: 16791555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:16800672-16800788:1:exon

position:16800672:1
position: 16800672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16800788:1
position: 16800788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:16802979-16803053:1:exon

position:16802979:1
position: 16802979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16803053:1
position: 16803053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:16810824-16810981:1:exon

position:16810824:1
position: 16810824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16810981:1
position: 16810981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:16813993-16819787:1:exon

position:16813993:1
position: 16813993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Mgat5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Mgat5
product: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 1 long SRA read, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034513055.1
SIO_010081: Mgat5
subclass of: SO_0000673
so part of: Mgat5
location: join(16560209..16560247,16583538..16583587,16638395..16638775,16655202..16655363,16698042..16698118,16699274..16699363,16716737..16716808,16719205..16719366,16722007..16722176,16725283..16725417,16732021..16732154,16745118..16745251,16781595..16781744,16791409..16791555,16800672..16800788,16802979..16803053,16810824..16810981,16813993..16819787)
location: region:16560209-16819787:1
so has part: feature:16560209-16560247:1:exon
so has part: feature:16583538-16583587:1:exon
so has part: feature:16638395-16638775:1:exon
so has part: feature:16655202-16655363:1:exon
so has part: feature:16698042-16698118:1:exon
so has part: feature:16699274-16699363:1:exon
so has part: feature:16716737-16716808:1:exon
so has part: feature:16719205-16719366:1:exon
so has part: feature:16722007-16722176:1:exon
so has part: feature:16725283-16725417:1:exon
so has part: feature:16732021-16732154:1:exon
so has part: feature:16745118-16745251:1:exon
so has part: feature:16781595-16781744:1:exon
so has part: feature:16791409-16791555:1:exon
so has part: feature:16800672-16800788:1:exon
so has part: feature:16802979-16803053:1:exon
so has part: feature:16810824-16810981:1:exon
so has part: feature:16813993-16819787:1:exon

position:16560209:1
position: 16560209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16560209-16560247:1:exon

position:16560247:1
position: 16560247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16583538-16583587:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16638395-16638775:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16655202-16655363:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16698042-16698118:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16699274-16699363:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16716737-16716808:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16719205-16719366:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16722007-16722176:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16725283-16725417:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16732021-16732154:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16745118-16745251:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16781595-16781744:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:16791409-16791555:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:16800672-16800788:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16802979-16803053:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:16810824-16810981:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:16813993-16819787:1:exon

Mgat5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mgat5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
translation: MAFFSPWKLSSQKLGFFLVTFGFIWGMMLLHFTIQQRTQPESSSMLREQILDLSKRYIKALAEENRNVVDGPYAGVMTAYDLKKTLAVLLDNILQRIGKLESKVDNLVNGTGANSTNSTTAVPSLVSLEKINVADIINGVQEKCVLPPMDGYPHCEGKIKWMKDMWRSDPCYADYGVDGTSCSFFIYLSEVENWCPRLPWRAKNPYEEADHNSLAEIRTDFNILYGMMKKHEEFRWMRLRIRRMADAWIQAIKSLAEKQNLEKRKRKKILVHLGLLTKESGFKIAETAFSGGPLGELVQWSDLITSLYLLGHDIRISASLAELKEIMKKVVGNRSGCPTVGDRIVELIYIDIVGLAQFKKTLGPSWVHYQCMLRVLDSFGTEPEFNHASYAQSKGHKTPWGKWNLNPQQFYTMFPHTPDNSFLGFVVEQHLNSSDIHHINEIKRQNQSLVYGKVDSFWKNKKLYLDIIHTYMEVHATVYGSSTKNIPSYVKNHGILSGRDLQFLLRETKLFVGLGFPYEGPAPLEAIANGCAFLNPKFNPPKSSKNTDFFIGKPTLRELTSQHPYAEVFIGRPHVWTVDLNNREEVEDAVKAILNQKIEPYMPYEFTCEGMLQRINAFIEKQDFCHGQVMWPPLSALQVKLAEPGQSCKQVCQESQLICEPSFFQHLNKEKDLMKYKVNCQSSELYKDILVPSFYPKSKHCVFQGDLLLFSCAGAHPTHQRICPCRDFIKGQVALCKDCL
SIO_010081: Mgat5
subclass of: SO_0000673
so part of: Mgat5
location: join(16638535..16638775,16655202..16655363,16698042..16698118,16699274..16699363,16716737..16716808,16719205..16719366,16722007..16722176,16725283..16725417,16732021..16732154,16745118..16745251,16781595..16781744,16791409..16791555,16800672..16800788,16802979..16803053,16810824..16810981,16813993..16814191)
location: region:16638535-16814191:1
so has part: feature:16638535-16638775:1:exon
so has part: feature:16655202-16655363:1:exon
so has part: feature:16698042-16698118:1:exon
so has part: feature:16699274-16699363:1:exon
so has part: feature:16716737-16716808:1:exon
so has part: feature:16719205-16719366:1:exon
so has part: feature:16722007-16722176:1:exon
so has part: feature:16725283-16725417:1:exon
so has part: feature:16732021-16732154:1:exon
so has part: feature:16745118-16745251:1:exon
so has part: feature:16781595-16781744:1:exon
so has part: feature:16791409-16791555:1:exon
so has part: feature:16800672-16800788:1:exon
so has part: feature:16802979-16803053:1:exon
so has part: feature:16810824-16810981:1:exon
so has part: feature:16813993-16814191:1:exon

XP_034368945.1
type: Protein
SIO_000068: ncbiprotein

position:16638535:1
position: 16638535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16814191:1
position: 16814191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16638535-16638775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16655202-16655363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16698042-16698118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16699274-16699363:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16716737-16716808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16719205-16719366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16722007-16722176:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16725283-16725417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16732021-16732154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16745118-16745251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16781595-16781744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16791409-16791555:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16800672-16800788:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:16802979-16803053:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:16810824-16810981:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16813993-16814191:1:exon

Mgat5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Mgat5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
translation: MAFFSPWKLSSQKLGFFLVTFGFIWGMMLLHFTIQQRTQPESSSMLREQILDLSKRYIKALAEENRNVVDGPYAGVMTAYDLKKTLAVLLDNILQRIGKLESKVDNLVNGTGANSTNSTTAVPSLVSLEKINVADIINGVQEKCVLPPMDGYPHCEGKIKWMKDMWRSDPCYADYGVDGTSCSFFIYLSEVENWCPRLPWRAKNPYEEADHNSLAEIRTDFNILYGMMKKHEEFRWMRLRIRRMADAWIQAIKSLAEKQNLEKRKRKKILVHLGLLTKESGFKIAETAFSGGPLGELVQWSDLITSLYLLGHDIRISASLAELKEIMKKVVGNRSGCPTVGDRIVELIYIDIVGLAQFKKTLGPSWVHYQCMLRVLDSFGTEPEFNHASYAQSKGHKTPWGKWNLNPQQFYTMFPHTPDNSFLGFVVEQHLNSSDIHHINEIKRQNQSLVYGKVDSFWKNKKLYLDIIHTYMEVHATVYGSSTKNIPSYVKNHGILSGRDLQFLLRETKLFVGLGFPYEGPAPLEAIANGCAFLNPKFNPPKSSKNTDFFIGKPTLRELTSQHPYAEVFIGRPHVWTVDLNNREEVEDAVKAILNQKIEPYMPYEFTCEGMLQRINAFIEKQDFCHGQVMWPPLSALQVKLAEPGQSCKQVCQESQLICEPSFFQHLNKEKDLMKYKVNCQSSELYKDILVPSFYPKSKHCVFQGDLLLFSCAGAHPTHQRICPCRDFIKGQVALCKDCL
SIO_010081: Mgat5
subclass of: SO_0000673
so part of: Mgat5
location: join(16638535..16638775,16655202..16655363,16698042..16698118,16699274..16699363,16716737..16716808,16719205..16719366,16722007..16722176,16725283..16725417,16732021..16732154,16745118..16745251,16781595..16781744,16791409..16791555,16800672..16800788,16802979..16803053,16810824..16810981,16813993..16814191)
location: region:16638535-16814191:1
so has part: feature:16638535-16638775:1:exon
so has part: feature:16655202-16655363:1:exon
so has part: feature:16698042-16698118:1:exon
so has part: feature:16699274-16699363:1:exon
so has part: feature:16716737-16716808:1:exon
so has part: feature:16719205-16719366:1:exon
so has part: feature:16722007-16722176:1:exon
so has part: feature:16725283-16725417:1:exon
so has part: feature:16732021-16732154:1:exon
so has part: feature:16745118-16745251:1:exon
so has part: feature:16781595-16781744:1:exon
so has part: feature:16791409-16791555:1:exon
so has part: feature:16800672-16800788:1:exon
so has part: feature:16802979-16803053:1:exon
so has part: feature:16810824-16810981:1:exon
so has part: feature:16813993-16814191:1:exon

XP_034368946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16638535-16638775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16655202-16655363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16698042-16698118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16699274-16699363:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16716737-16716808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16719205-16719366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16722007-16722176:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16725283-16725417:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16732021-16732154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16745118-16745251:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16781595-16781744:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16791409-16791555:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16800672-16800788:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:16802979-16803053:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:16810824-16810981:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16813993-16814191:1:exon

LOC117716721
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: LOC117716721
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 16708680..16708788
location: region:16708680-16708788:1
so has part: feature:16708680-16708788:1:exon
subclass of: SO_0000578

117716721
type: Gene
SIO_000068: ncbigene

position:16708680:1
position: 16708680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16708788:1
position: 16708788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16708680-16708788:1:exon

LOC117716721
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 61156
nc RNA class: snoRNA
gene: LOC117716721
product: small nucleolar RNA U6-53/MBII-28
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00377
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004607815.1
SIO_010081: LOC117716721
subclass of: SO_0000673
so part of: LOC117716721
location: 16708680..16708788
location: region:16708680-16708788:1
so has part: feature:16708680-16708788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16708680-16708788:1:exon

Tmem163
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Tmem163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16822684..16996837)
location: region:16822684-16996837:-1
so has part: feature:16822684-16996837:-1:exon
subclass of: SO_0000010

117716268
type: Gene
SIO_000068: ncbigene

position:16822684:-1
position: 16822684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16996837:-1
position: 16996837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16822684-16996837:-1:exon

Tmem163
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Tmem163
product: transmembrane protein 163
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034513277.1
SIO_010081: Tmem163
subclass of: SO_0000673
so part of: Tmem163
location: complement(join(16822684..16823459,16826693..16826834,16831082..16831193,16850595..16850691,16885504..16885595,16886918..16886961,16987097..16987216,16996505..16996837))
location: region:16822684-16996837:-1
so has part: feature:16996505-16996837:-1:exon
so has part: feature:16987097-16987216:-1:exon
so has part: feature:16886918-16886961:-1:exon
so has part: feature:16885504-16885595:-1:exon
so has part: feature:16850595-16850691:-1:exon
so has part: feature:16831082-16831193:-1:exon
so has part: feature:16826693-16826834:-1:exon
so has part: feature:16822684-16823459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16996505-16996837:-1:exon

position:16996505:-1
position: 16996505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16987097-16987216:-1:exon

position:16987097:-1
position: 16987097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16987216:-1
position: 16987216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16886918-16886961:-1:exon

position:16886918:-1
position: 16886918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16886961:-1
position: 16886961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16885504-16885595:-1:exon

position:16885504:-1
position: 16885504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16885595:-1
position: 16885595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16850595-16850691:-1:exon

position:16850595:-1
position: 16850595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16850691:-1
position: 16850691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16831082-16831193:-1:exon

position:16831082:-1
position: 16831082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16831193:-1
position: 16831193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16826693-16826834:-1:exon

position:16826693:-1
position: 16826693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16826834:-1
position: 16826834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:16822684-16823459:-1:exon

position:16823459:-1
position: 16823459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

Tmem163
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Tmem163
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 163
translation: MEPAPGSERRSPPGPGVPRPPPRGHAPSTAAPAPSPAPLSSSVQPDEERQPRISESGQFSDGLEDRGLLESSTRLKPHEAQNYRKKALWVSWLSIIVTLALAVAAFTVSVMRYSASAFGFAFDAILDVLSSAIVLWRYSNAAAVHSAHREYIACVILGVIFLLSSICIVVKAIHDLSTRLLPEVDDFLFSVSILSGILCSILAVLKFMLGKVLTSRALITDGFNSLVGGVMGFSILLSAEVFKHNAAVWYLDGSIGVLIGLTIFAYGVKLLIDMVPRVRQTRHYEMFE
SIO_010081: Tmem163
subclass of: SO_0000673
so part of: Tmem163
location: complement(join(16823399..16823459,16826693..16826834,16831082..16831193,16850595..16850691,16885504..16885595,16886918..16886961,16987097..16987216,16996505..16996703))
location: region:16823399-16996703:-1
so has part: feature:16996505-16996703:-1:exon
so has part: feature:16987097-16987216:-1:exon
so has part: feature:16886918-16886961:-1:exon
so has part: feature:16885504-16885595:-1:exon
so has part: feature:16850595-16850691:-1:exon
so has part: feature:16831082-16831193:-1:exon
so has part: feature:16826693-16826834:-1:exon
so has part: feature:16823399-16823459:-1:exon

XP_034369168.1
type: Protein
SIO_000068: ncbiprotein

position:16823399:-1
position: 16823399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16996703:-1
position: 16996703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16996505-16996703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16987097-16987216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16886918-16886961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16885504-16885595:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16850595-16850691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16831082-16831193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16826693-16826834:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16823399-16823459:-1:exon

Acmsd
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Acmsd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 17041342..17076753
location: region:17041342-17076753:1
so has part: feature:17041342-17076753:1:exon
subclass of: SO_0000010

117715981
type: Gene
SIO_000068: ncbigene

position:17041342:1
position: 17041342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17076753:1
position: 17076753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17041342-17076753:1:exon

Acmsd
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Acmsd
product: aminocarboxymuconate semialdehyde decarboxylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 6 Proteins
transcript id: XM_034512797.1
SIO_010081: Acmsd
subclass of: SO_0000673
so part of: Acmsd
location: join(17041342..17041471,17050695..17050739,17052031..17052127,17054732..17054781,17056917..17057153,17062831..17062924,17066772..17066867,17068475..17068647,17075089..17075187,17075495..17076753)
location: region:17041342-17076753:1
so has part: feature:17041342-17041471:1:exon
so has part: feature:17050695-17050739:1:exon
so has part: feature:17052031-17052127:1:exon
so has part: feature:17054732-17054781:1:exon
so has part: feature:17056917-17057153:1:exon
so has part: feature:17062831-17062924:1:exon
so has part: feature:17066772-17066867:1:exon
so has part: feature:17068475-17068647:1:exon
so has part: feature:17075089-17075187:1:exon
so has part: feature:17075495-17076753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17041342-17041471:1:exon

position:17041471:1
position: 17041471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17050695-17050739:1:exon

position:17050695:1
position: 17050695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17050739:1
position: 17050739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17052031-17052127:1:exon

position:17052031:1
position: 17052031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17052127:1
position: 17052127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17054732-17054781:1:exon

position:17054732:1
position: 17054732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17054781:1
position: 17054781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17056917-17057153:1:exon

position:17056917:1
position: 17056917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17057153:1
position: 17057153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17062831-17062924:1:exon

position:17062831:1
position: 17062831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17062924:1
position: 17062924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17066772-17066867:1:exon

position:17066772:1
position: 17066772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17066867:1
position: 17066867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17068475-17068647:1:exon

position:17068475:1
position: 17068475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17068647:1
position: 17068647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:17075089-17075187:1:exon

position:17075089:1
position: 17075089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17075187:1
position: 17075187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:17075495-17076753:1:exon

position:17075495:1
position: 17075495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Acmsd
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Acmsd
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
translation: MKIDIHTHILPKEWPDLEKRFGYGGWVQLQQQGKGEAKMIKDGKVFRVIQQNCWDPEVRIREMNQKGVTVQALSTVPVMFSYWAKPKDTLELCKFLNNDLAATVARYPRRFVGLGTLPMQAPELAVEEMERCVKDLGFPGIQIGSHINMWDLNDPELFPIYTAAERLNCSLFVHPWDMQMDGRMAKYWLPWLVGMPSETTMAICSMIMGGVFEKFPKLKVCFAHGGGAFPFTIGRIAHGFNMRPDLCAQDNSSDPRKYLGSFYTDSLVHDPLSLKLLTDVIGKDKVILGTDYPFPLGEQEPGKLIESMAEFDEEIKDKLTAGNALAFLGLERKQFE
SIO_010081: Acmsd
subclass of: SO_0000673
so part of: Acmsd
location: join(17041415..17041471,17050695..17050739,17052031..17052127,17054732..17054781,17056917..17057153,17062831..17062924,17066772..17066867,17068475..17068647,17075089..17075187,17075495..17075557)
location: region:17041415-17075557:1
so has part: feature:17041415-17041471:1:exon
so has part: feature:17050695-17050739:1:exon
so has part: feature:17052031-17052127:1:exon
so has part: feature:17054732-17054781:1:exon
so has part: feature:17056917-17057153:1:exon
so has part: feature:17062831-17062924:1:exon
so has part: feature:17066772-17066867:1:exon
so has part: feature:17068475-17068647:1:exon
so has part: feature:17075089-17075187:1:exon
so has part: feature:17075495-17075557:1:exon

XP_034368688.1
type: Protein
SIO_000068: ncbiprotein

position:17041415:1
position: 17041415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17075557:1
position: 17075557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17041415-17041471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17050695-17050739:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17052031-17052127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17054732-17054781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17056917-17057153:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17062831-17062924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17066772-17066867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17068475-17068647:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17075089-17075187:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17075495-17075557:1:exon

Ccnt2
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Ccnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 17082830..17117671
location: region:17082830-17117671:1
so has part: feature:17082830-17117671:1:exon
subclass of: SO_0000010

117715980
type: Gene
SIO_000068: ncbigene

position:17082830:1
position: 17082830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17117671:1
position: 17117671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17082830-17117671:1:exon

Ccnt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ccnt2
product: cyclin T2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 5 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034512792.1
SIO_010081: Ccnt2
subclass of: SO_0000673
so part of: Ccnt2
location: join(17082830..17083072,17083784..17083865,17101538..17101666,17103291..17103351,17105196..17105258,17107640..17107685,17109200..17109363,17111161..17111231,17111720..17117671)
location: region:17082830-17117671:1
so has part: feature:17082830-17083072:1:exon
so has part: feature:17083784-17083865:1:exon
so has part: feature:17101538-17101666:1:exon
so has part: feature:17103291-17103351:1:exon
so has part: feature:17105196-17105258:1:exon
so has part: feature:17107640-17107685:1:exon
so has part: feature:17109200-17109363:1:exon
so has part: feature:17111161-17111231:1:exon
so has part: feature:17111720-17117671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17082830-17083072:1:exon

position:17083072:1
position: 17083072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17083784-17083865:1:exon

position:17083784:1
position: 17083784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17083865:1
position: 17083865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17101538-17101666:1:exon

position:17101538:1
position: 17101538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17101666:1
position: 17101666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17103291-17103351:1:exon

position:17103291:1
position: 17103291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17103351:1
position: 17103351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17105196-17105258:1:exon

position:17105196:1
position: 17105196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17105258:1
position: 17105258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17107640-17107685:1:exon

position:17107640:1
position: 17107640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17107685:1
position: 17107685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17109200-17109363:1:exon

position:17109200:1
position: 17109200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17109363:1
position: 17109363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17111161-17111231:1:exon

position:17111161:1
position: 17111161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17111231:1
position: 17111231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:17111720-17117671:1:exon

position:17111720:1
position: 17111720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ccnt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ccnt2
product: cyclin T2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 7 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034512793.1
SIO_010081: Ccnt2
subclass of: SO_0000673
so part of: Ccnt2
location: join(17082888..17083072,17083784..17083865,17101538..17101666,17103291..17103351,17105196..17105258,17107640..17107685,17109200..17109363,17111161..17111231,17111720..17112851,17112950..17117671)
location: region:17082888-17117671:1
so has part: feature:17082888-17083072:1:exon
so has part: feature:17083784-17083865:1:exon
so has part: feature:17101538-17101666:1:exon
so has part: feature:17103291-17103351:1:exon
so has part: feature:17105196-17105258:1:exon
so has part: feature:17107640-17107685:1:exon
so has part: feature:17109200-17109363:1:exon
so has part: feature:17111161-17111231:1:exon
so has part: feature:17111720-17112851:1:exon
so has part: feature:17112950-17117671:1:exon

position:17082888:1
position: 17082888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17082888-17083072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17083784-17083865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17101538-17101666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17103291-17103351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17105196-17105258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17107640-17107685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17109200-17109363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17111161-17111231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17111720-17112851:1:exon

position:17112851:1
position: 17112851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:17112950-17117671:1:exon

position:17112950:1
position: 17112950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

Ccnt2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 61156
gene: Ccnt2
product: cyclin T2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004607717.1
SIO_010081: Ccnt2
so part of: Ccnt2
location: join(17082894..17083072,17083784..17083865,17101538..17101666,17103291..17103351,17105196..17105258,17107640..17107995,17109200..17109363,17111161..17111231,17111720..17117671)
location: region:17082894-17117671:1
so has part: feature:17082894-17083072:1:exon
so has part: feature:17083784-17083865:1:exon
so has part: feature:17101538-17101666:1:exon
so has part: feature:17103291-17103351:1:exon
so has part: feature:17105196-17105258:1:exon
so has part: feature:17107640-17107995:1:exon
so has part: feature:17109200-17109363:1:exon
so has part: feature:17111161-17111231:1:exon
so has part: feature:17111720-17117671:1:exon

position:17082894:1
position: 17082894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17082894-17083072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17083784-17083865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17101538-17101666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17103291-17103351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17105196-17105258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17107640-17107995:1:exon

position:17107995:1
position: 17107995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17109200-17109363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17111161-17111231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17111720-17117671:1:exon

Ccnt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ccnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-T2 isoform X1
translation: MASGRGASSRWFFTREQLENTPSRRCGVEADEELSHRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNRNIISPTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVLLETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPSRLKRIRNWRAMAKKPKVDGQVSETPLLGSSLVQNSILVDSVTGVPANPSFQKPSTSTFPAPIPLNSGNTSVQDSRASDNLSVLAAGMPSTSYSLSSHQEWPQHPDSARTDPVYTQKQEATLSGSQYLSFQQGPSMALHSGLHHRPDKVADHSSAKQEYAHKAGSSKHHGPIPATPGVVPQKMSLDKYREKRKLETLDLDTRDHYIAAHAEQQHKHGPAQAVAGTSVTSPIKMKLPLSNSDKPEKHLAEKKERSGSLKLRIPIPPPDKGPSKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKDKHKEHPANRHHSSHKHLHMHSGGSKHAADGMPPTVLRSPVGLGPEGISSASSARKKLHSNDASHNHHSKMSKSSKSSGSSSSSSSVKQYLSSHSSVFNHPLPPPPPVTYQVGYGHLSTLVKLDKKPVEPHGPEANHEYSTSSQHMDYKDTFDMLDSLLSAQGMNM
SIO_010081: Ccnt2
subclass of: SO_0000673
so part of: Ccnt2
location: join(17082915..17083072,17083784..17083865,17101538..17101666,17103291..17103351,17105196..17105258,17107640..17107685,17109200..17109363,17111161..17111231,17111720..17113117)
location: region:17082915-17113117:1
so has part: feature:17082915-17083072:1:exon
so has part: feature:17083784-17083865:1:exon
so has part: feature:17101538-17101666:1:exon
so has part: feature:17103291-17103351:1:exon
so has part: feature:17105196-17105258:1:exon
so has part: feature:17107640-17107685:1:exon
so has part: feature:17109200-17109363:1:exon
so has part: feature:17111161-17111231:1:exon
so has part: feature:17111720-17113117:1:exon

XP_034368683.1
type: Protein
SIO_000068: ncbiprotein

position:17082915:1
position: 17082915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17113117:1
position: 17113117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17082915-17083072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17083784-17083865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17101538-17101666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17103291-17103351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17105196-17105258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17107640-17107685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17109200-17109363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17111161-17111231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17111720-17113117:1:exon

Ccnt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ccnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-T2 isoform X2
translation: MASGRGASSRWFFTREQLENTPSRRCGVEADEELSHRQQAANLIQDMGQRLNVSQLTINTAIVYMHRFYMHHSFTKFNRNIISPTALFLAAKVEEQARKLEHVIKVAHACLHPLEPLLDTKCDAYLQQTQELVLLETIMLQTLGFEITIEHPHTDVVKCTQLVRASKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPSRLKRIRNWRAMAKKPKVDGQVSETPLLGSSLVQNSILVDSVTGVPANPSFQKPSTSTFPAPIPLNSGNTSVQDSRASDNLSVLAAGMPSTSYSLSSHQEWPQHPDSARTDPVYTQKQEATLSGSQYLSFQQGPSMALHSGLHHRPDKVADHSSAKQEYAHKAGSSKHHGPIPATPGVVPQKMSLDKYREKRKLETLDLDTRDHYIAAHAEQQHKHGPAQAVAGTSVTSPIKMKLPLSNSDKPEKHLAEKKERSGSLKLRIPIPPPDKGPSKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKDKHKEHPANRHHSSHKHLHMHSGGSKHAADGMPPTVLRSPVGLGPEGISSASSARKKLHSNDASHNHHSKMSKSSKSSGGLRTSQHPREIGQETSGAPRS
SIO_010081: Ccnt2
subclass of: SO_0000673
so part of: Ccnt2
location: join(17082915..17083072,17083784..17083865,17101538..17101666,17103291..17103351,17105196..17105258,17107640..17107685,17109200..17109363,17111161..17111231,17111720..17112851,17112950..17113017)
location: region:17082915-17113017:1
so has part: feature:17082915-17083072:1:exon
so has part: feature:17083784-17083865:1:exon
so has part: feature:17101538-17101666:1:exon
so has part: feature:17103291-17103351:1:exon
so has part: feature:17105196-17105258:1:exon
so has part: feature:17107640-17107685:1:exon
so has part: feature:17109200-17109363:1:exon
so has part: feature:17111161-17111231:1:exon
so has part: feature:17111720-17112851:1:exon
so has part: feature:17112950-17113017:1:exon

XP_034368684.1
type: Protein
SIO_000068: ncbiprotein

position:17113017:1
position: 17113017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17082915-17083072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17083784-17083865:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17101538-17101666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17103291-17103351:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17105196-17105258:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:17107640-17107685:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17109200-17109363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17111161-17111231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:17111720-17112851:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17112950-17113017:1:exon

Ccnt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ccnt2
product: cyclin T2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034512796.1
SIO_010081: Ccnt2
subclass of: SO_0000673
so part of: Ccnt2
location: join(17107176..17107520,17107640..17107685,17109200..17109363,17111161..17111231,17111720..17117671)
location: region:17107176-17117671:1
so has part: feature:17107176-17107520:1:exon
so has part: feature:17107640-17107685:1:exon
so has part: feature:17109200-17109363:1:exon
so has part: feature:17111161-17111231:1:exon
so has part: feature:17111720-17117671:1:exon

position:17107176:1
position: 17107176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17107176-17107520:1:exon

position:17107520:1
position: 17107520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17107640-17107685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17109200-17109363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17111161-17111231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17111720-17117671:1:exon

Ccnt2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Ccnt2
product: cyclin T2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034512794.1
SIO_010081: Ccnt2
subclass of: SO_0000673
so part of: Ccnt2
location: join(17107176..17107513,17107640..17107685,17109200..17109363,17111161..17111231,17111720..17117671)
location: region:17107176-17117671:1
so has part: feature:17107176-17107513:1:exon
so has part: feature:17107640-17107685:1:exon
so has part: feature:17109200-17109363:1:exon
so has part: feature:17111161-17111231:1:exon
so has part: feature:17111720-17117671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17107176-17107513:1:exon

position:17107513:1
position: 17107513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17107640-17107685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17109200-17109363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17111161-17111231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17111720-17117671:1:exon

Ccnt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ccnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-T2 isoform X4
translation: MLLKIFSSIENDGALVIFVSTSKDLAQTSYFMATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPSRLKRIRNWRAMAKKPKVDGQVSETPLLGSSLVQNSILVDSVTGVPANPSFQKPSTSTFPAPIPLNSGNTSVQDSRASDNLSVLAAGMPSTSYSLSSHQEWPQHPDSARTDPVYTQKQEATLSGSQYLSFQQGPSMALHSGLHHRPDKVADHSSAKQEYAHKAGSSKHHGPIPATPGVVPQKMSLDKYREKRKLETLDLDTRDHYIAAHAEQQHKHGPAQAVAGTSVTSPIKMKLPLSNSDKPEKHLAEKKERSGSLKLRIPIPPPDKGPSKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKDKHKEHPANRHHSSHKHLHMHSGGSKHAADGMPPTVLRSPVGLGPEGISSASSARKKLHSNDASHNHHSKMSKSSKSSGSSSSSSSVKQYLSSHSSVFNHPLPPPPPVTYQVGYGHLSTLVKLDKKPVEPHGPEANHEYSTSSQHMDYKDTFDMLDSLLSAQGMNM
SIO_010081: Ccnt2
subclass of: SO_0000673
so part of: Ccnt2
location: join(17107460..17107520,17107640..17107685,17109200..17109363,17111161..17111231,17111720..17113117)
location: region:17107460-17113117:1
so has part: feature:17107460-17107520:1:exon
so has part: feature:17107640-17107685:1:exon
so has part: feature:17109200-17109363:1:exon
so has part: feature:17111161-17111231:1:exon
so has part: feature:17111720-17113117:1:exon

XP_034368687.1
type: Protein
SIO_000068: ncbiprotein

position:17107460:1
position: 17107460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17107460-17107520:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17107640-17107685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17109200-17109363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17111161-17111231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:17111720-17113117:1:exon

Ccnt2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 61156
gene: Ccnt2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-T2 isoform X3
translation: MATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDPTVTLELLDELTHEFLQILEKTPSRLKRIRNWRAMAKKPKVDGQVSETPLLGSSLVQNSILVDSVTGVPANPSFQKPSTSTFPAPIPLNSGNTSVQDSRASDNLSVLAAGMPSTSYSLSSHQEWPQHPDSARTDPVYTQKQEATLSGSQYLSFQQGPSMALHSGLHHRPDKVADHSSAKQEYAHKAGSSKHHGPIPATPGVVPQKMSLDKYREKRKLETLDLDTRDHYIAAHAEQQHKHGPAQAVAGTSVTSPIKMKLPLSNSDKPEKHLAEKKERSGSLKLRIPIPPPDKGPSKEELKMKIKVSSSERHSSSDEGSGKSKHSSPHISRDHKDKHKEHPANRHHSSHKHLHMHSGGSKHAADGMPPTVLRSPVGLGPEGISSASSARKKLHSNDASHNHHSKMSKSSKSSGSSSSSSSVKQYLSSHSSVFNHPLPPPPPVTYQVGYGHLSTLVKLDKKPVEPHGPEANHEYSTSSQHMDYKDTFDMLDSLLSAQGMNM
SIO_010081: Ccnt2
subclass of: SO_0000673
so part of: Ccnt2
location: join(17107672..17107685,17109200..17109363,17111161..17111231,17111720..17113117)
location: region:17107672-17113117:1
so has part: feature:17107672-17107685:1:exon
so has part: feature:17109200-17109363:1:exon
so has part: feature:17111161-17111231:1:exon
so has part: feature:17111720-17113117:1:exon

XP_034368685.1
type: Protein
SIO_000068: ncbiprotein

position:17107672:1
position: 17107672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17107672-17107685:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:17109200-17109363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17111161-17111231:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:17111720-17113117:1:exon

Map3k19
type: Gene
subclass of: SO_0000704
RO_0002162: 61156
gene: Map3k19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17124743..17158717)
location: region:17124743-17158717:-1
so has part: feature:17124743-17158717:-1:exon
subclass of: SO_0000010

117716540
type: Gene
SIO_000068: ncbigene

position:17124743:-1
position: 17124743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17158717:-1
position: 17158717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17124743-17158717:-1:exon

Map3k19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 61156
gene: Map3k19
product: mitogen-activated protein kinase kinase kinase 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins
transcript id: XM_034513600.1
SIO_010081: Map3k19
subclass of: SO_0000673
so part of: Map3k19
location: complement(join(17124743..17124809,17126852..17127549,17128626..17128772,17130317..17132743,17136856..17136899,17137299..17137558,17139899..17139971,17141643..17141733,17146156..17146268,17149269..17149384,17149997..17150151,17155802..17155990,17158544..17158717))
location: region:17124743-17158717:-1
so has part: feature:17158544-17158717:-1:exon
so has part: feature:17155802-17155990:-1:exon
so has part: feature:17149997-17150151:-1:exon
so has part: feature:17149269-17149384:-1:exon
so has part: feature:17146156-17146268:-1:exon
so has part: feature:17141643-17141733:-1:exon
so has part: feature:17139899-17139971:-1:exon
so has part: feature:17137299-17137558:-1:exon
so has part: feature:17136856-17136899:-1:exon
so has part: feature:17130317-17132743:-1:exon
so has part: feature:17128626-17128772:-1:exon
so has part: feature:17126852-17127549:-1:exon
so has part: feature:17124743-17124809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17158544-17158717:-1:exon

position:17158544:-1
position: 17158544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:17155802-17155990:-1:exon

position:17155802:-1
position: 17155802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17155990:-1
position: 17155990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17149997-17150151:-1:exon

position:17149997:-1
position: 17149997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17150151:-1
position: 17150151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:17149269-17149384:-1:exon

position:17149269:-1
position: 17149269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17149384:-1
position: 17149384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:17146156-17146268:-1:exon

position:17146156:-1
position: 17146156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17146268:-1
position: 17146268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17141643-17141733:-1:exon

position:17141643:-1
position: 17141643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17141733:-1
position: 17141733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17139899-17139971:-1:exon

position:17139899:-1
position: 17139899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17139971:-1
position: 17139971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17137299-17137558:-1:exon

position:17137299:-1
position: 17137299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17137558:-1
position: 17137558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:17136856-17136899:-1:exon

position:17136856:-1
position: 17136856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17136899:-1
position: 17136899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:17130317-17132743:-1:exon

position:17130317:-1
position: 17130317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17132743:-1
position: 17132743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17128626-17128772:-1:exon

position:17128626:-1
position: 17128626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition