Xanthomonas citri pv. citri strain MN12 plasmid pXAC64, complete sequence.
type: Entry
definition: Xanthomonas citri pv. citri strain MN12 plasmid pXAC64, complete sequence.
sequence version: NZ_CP008997.1
sequence date: 2023-02-11
sequence: sequence
division: CON
label: NZ_CP008997.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02911843
keyword: RefSeq
source: Xanthomonas citri pv. citri (Xanthomonas citri subsp. citri)
organism: Xanthomonas citri pv. citri
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.
reference: 1
references: 25689023
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP008997.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Bio v. 6.0\nReference-guided Assembly :: AE008925.1\nSequencing Technology :: Illumina CLC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/11/2023 11:05:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,507\nCDSs (total) :: 4,408\nGenes (coding) :: 4,241\nCDSs (with protein) :: 4,241\nGenes (RNA) :: 99\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 40\nPseudo Genes (total) :: 167\nCDSs (without protein) :: 167\nPseudo Genes (ambiguous residues) :: 0 of 167\nPseudo Genes (frameshifted) :: 97 of 167\nPseudo Genes (incomplete) :: 71 of 167\nPseudo Genes (internal stop) :: 29 of 167\nPseudo Genes (multiple problems) :: 27 of 167\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 63721
topology: circular
so has quality: SO_0000988
location: 1..63721
location: region:1-63721:1
RO_0002162: 611301

NZ_CP008997
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02911843
type: BioSample
SIO_000068: biosample

1
title: Positive selection is the main driving force for evolution of citrus canker-causing Xanthomonas
author: Zhang, Y.
author: Jalan, N.
author: Zhou, X.
author: Goss, E.
author: Jones, J.B.
author: Setubal, J.C.
author: Deng, X.
author: Wang, N.
journal: ISME J
volume: 9
issue: 10
pages: 2128-2138
year: 2015
pubmed: 25689023

25689023
type: PubMed
SIO_000068: pubmed

2
title: comparative genomic analysis of citrus canker causing Xanthomonas
author: Zhang, Y.
author: Jalan, N.
author: Wang, N.
journal: Unpublished

3
title: Direct Submission
author: Zhang, Y.
author: Jalan, N.
author: Wang, N.
journal: Submitted (24-JUL-2014) University of Florida, Citrus Research and Education Center, 700 Experiment Station Road, Lake Alfred, FL 33850, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63721:1
position: 63721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-63721:1:source
so part of: sequence
organism: Xanthomonas citri pv. citri
mol type: genomic DNA
strain: MN12
isolation source: citrus infected tissue
host: citrus spp.
sub species: citri
plasmid: pXAC64
country: USA: Florida
collection date: 1997
pathovar: citri

611301
type: Taxonomy
SIO_000068: taxonomy

AMD14_RS22425
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22425
so part of: sequence
location: complement(join(63398..63721,1..93))
location: region:1-63721:-1
so has part: feature:1-93:-1:exon
so has part: feature:63398-63721:-1:exon
subclass of: SO_0000010

66913354
type: Gene
SIO_000068: ncbigene

position:1:-1
position: 1
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63721:-1
position: 63721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-93:-1:exon

position:93:-1
position: 93
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63398-63721:-1:exon

position:63398:-1
position: 63398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AMD14_RS22425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017163976.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: transposase
translation: MQEEQTTRLQHNMGTLVRLSRHEGYCDITFHDRDPLIGVRLSPALNAALMYGAGARKMTEMLDRIETRDGDVFRAVDVWVIVEFPNGLPSDEDLARVDLADGEAEVAPGVSMRQMAKEVYRCRDDLAAERMLRRILAA
SIO_010081: AMD14_RS22425
subclass of: SO_0000673
so part of: AMD14_RS22425
location: complement(join(63398..63721,1..93))
location: region:1-63721:-1
so has part: feature:1-93:-1:exon
so has part: feature:63398-63721:-1:exon

WP_087962480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-93:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63398-63721:-1:exon

AMD14_RS24455
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS24455
so part of: sequence
location: complement(147..353)
location: region:147-353:-1
so has part: feature:147-353:-1:exon
subclass of: SO_0000010

66913499
type: Gene
SIO_000068: ncbigene

position:147:-1
position: 147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353:-1
position: 353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147-353:-1:exon

AMD14_RS24455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS24455
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYQNAICQVLQISKRTPIYRGARISSLRITLALPLAFGGSGLPPQDADWIDLRDHGWEALSIMLRKVG
SIO_010081: AMD14_RS24455
subclass of: SO_0000673
so part of: AMD14_RS24455
location: complement(147..353)
location: region:147-353:-1
so has part: feature:147-353:-1:exon

WP_011052961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147-353:-1:exon

AMD14_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00180
old locus tag: J164_00045
old locus tag: J164_RS00185
so part of: sequence
location: complement(403..732)
location: region:403-732:-1
so has part: feature:403-732:-1:exon
subclass of: SO_0000010

66909161
type: Gene
SIO_000068: ncbigene

position:403:-1
position: 403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732:-1
position: 732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403-732:-1:exon

AMD14_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00180
old locus tag: J164_00045
old locus tag: J164_RS00185
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918642.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQNKEAADHLAERARELMGSDDLDTRERGERLMSEAERQWREIPTMKDPPGLTKRLLCSVILIYGGTAFLWATAGWKIALGIFLVIWGIDLRLQVNEALTKRLRETLTW
SIO_010081: AMD14_RS00180
subclass of: SO_0000673
so part of: AMD14_RS00180
location: complement(403..732)
location: region:403-732:-1
so has part: feature:403-732:-1:exon

WP_005918642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:403-732:-1:exon

AMD14_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00185
old locus tag: J164_00046
old locus tag: J164_RS00190
so part of: sequence
location: 879..1478
location: region:879-1478:1
so has part: feature:879-1478:1:exon
subclass of: SO_0000010

66909162
type: Gene
SIO_000068: ncbigene

position:879:1
position: 879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478:1
position: 1478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879-1478:1:exon

AMD14_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00185
old locus tag: J164_00046
old locus tag: J164_RS00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172391.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEKYWPDHLAKGYIAIEGAQFSLAHLQPFNYQVAVQAPNQAAVTVSVQVEFSSHCVSKGPPEKGPALVFRESHDDLVIDGRRIWRCFHPARYAASALLPDIMRTLDQRPCLFTNGDNFLTMELQELIPGYPPGAQYEVYFNVAQRGAGKVRIYVESAYVRDEDADNDPYKFKKDDRIKGWRLLLNRATGKPVRRPPKR
SIO_010081: AMD14_RS00185
subclass of: SO_0000673
so part of: AMD14_RS00185
location: 879..1478
location: region:879-1478:1
so has part: feature:879-1478:1:exon

WP_015462601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:879-1478:1:exon

AMD14_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00190
old locus tag: J164_00047
old locus tag: J164_RS00195
so part of: sequence
location: 1805..2254
location: region:1805-2254:1
so has part: feature:1805-2254:1:exon
subclass of: SO_0000010

66909163
type: Gene
SIO_000068: ncbigene

position:1805:1
position: 1805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2254:1
position: 2254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1805-2254:1:exon

AMD14_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00190
old locus tag: J164_00047
old locus tag: J164_RS00195
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017170297.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPSPISIATLASAGALRTVQLVGQVGGYAVMVRVGQTEKQLTGQRGEPRVFASLDTAAGQLLALGVTVFEVLPANYVRAPKVYRRGRPAALKELAKIKREDKPAKRTPAKKPAGAAAVATKILPSDRAQLKLPGLPRTRKTARTVGAGA
SIO_010081: AMD14_RS00190
subclass of: SO_0000673
so part of: AMD14_RS00190
location: 1805..2254
location: region:1805-2254:1
so has part: feature:1805-2254:1:exon

WP_045720654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1805-2254:1:exon

AMD14_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00195
old locus tag: J164_00048
old locus tag: J164_RS00200
so part of: sequence
location: 2251..2856
location: region:2251-2856:1
so has part: feature:2251-2856:1:exon
subclass of: SO_0000010

66909164
type: Gene
SIO_000068: ncbigene

position:2251:1
position: 2251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856:1
position: 2856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2251-2856:1:exon

AMD14_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00195
old locus tag: J164_00048
old locus tag: J164_RS00200
EC number: 3.4.24.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052963.1
GO function: GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO process: GO:0006508 - proteolysis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M48 family metalloprotease
translation: MSTTTHRQLQRSVDAIAAHVDIVPPRVRLWRHRNARYSALTHTIAVSRVLVGALNESQLRTLLAHEVGHAMRRATMLKRVGSYFWPPALALVVGAMTAAAVCSFAAKPLAITDPQTLCALVLVIVAAVVAGQLAERTDRRARRDSYAEELRADRFANRMVGDPDAMTAVLHACARIEDGGELGAQAERRIAFVHHTAGARR
SIO_010081: AMD14_RS00195
subclass of: SO_0000673
so part of: AMD14_RS00195
location: 2251..2856
location: region:2251-2856:1
so has part: feature:2251-2856:1:exon

WP_011052963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2251-2856:1:exon

AMD14_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00200
old locus tag: J164_00049
old locus tag: J164_RS00205
pseudo: true
so part of: sequence
location: 2853..>3347
location: region:2853-3347:1
so has part: feature:2853-3347:1:exon
subclass of: SO_0000010

66909165
type: Gene
SIO_000068: ncbigene

position:2853:1
position: 2853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3347:1
position: 3347
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2853-3347:1:exon

AMD14_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00200
old locus tag: J164_00049
old locus tag: J164_RS00205
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017163981.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMD14_RS00200
subclass of: SO_0000673
so part of: AMD14_RS00200
location: 2853..>3347
location: region:2853-3347:1
so has part: feature:2853-3347:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2853-3347:1:exon

AMD14_RS22430
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22430
so part of: sequence
location: complement(3475..3819)
location: region:3475-3819:-1
so has part: feature:3475-3819:-1:exon
subclass of: SO_0000010

66913355
type: Gene
SIO_000068: ncbigene

position:3475:-1
position: 3475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3819:-1
position: 3819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3475-3819:-1:exon

AMD14_RS22430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014090222.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLTNNDALSMLRKSIILAKISSFLAAIAFGFLFLSISAPSQADDLGAVSVHGDIQPANPTDNQVRSAHQQQALGKCKQQFVNSSSAYLASWAVTAGGKHPDYWNINSVWICTSG
SIO_010081: AMD14_RS22430
subclass of: SO_0000673
so part of: AMD14_RS22430
location: complement(3475..3819)
location: region:3475-3819:-1
so has part: feature:3475-3819:-1:exon

WP_075150220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3475-3819:-1:exon

AMD14_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00205
old locus tag: J164_00050
old locus tag: J164_RS00210
so part of: sequence
location: complement(3862..5139)
location: region:3862-5139:-1
so has part: feature:3862-5139:-1:exon
subclass of: SO_0000010

66909166
type: Gene
SIO_000068: ncbigene

position:3862:-1
position: 3862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5139:-1
position: 5139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3862-5139:-1:exon

AMD14_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00205
old locus tag: J164_00050
old locus tag: J164_RS00210
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014090221.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic murein transglycosylase
translation: MIMPSRLLRLTLGVSVCVAATSVAAQAIAPETTASSATDAGGQQQDPAPTSSFEQWLADFRQRALAAGIGATTLDNALAGVTPDPAVHELDQRQPEFTQYLWDYLDARVTPSAIQEGQQLLISQHALFEKLRQHYGVDPGILTAIWSMESGYGKQIGDFYVIRSLATLAHEGRRTTYGNTQLLAALQILQTEKSIDRSQLVGSWAGAMGQTQFIPSTYRDYAVDEDGDQKRDVWNSKADALGSAANYLKQNNWTSAVPWGQEVQLSAGFDYAQADLTIKKTVAEWQRLGVAPRRPIAPALAQQLASVLLPTGYRGPAFLVFDNFRSILRYNNSTAYALAVGLLADGYAGRAGVKQPWPKDDPPLNSTAQITELQQRLTDKGFDVGGIDGVLGAQTRQGIRAFQRSQQLPQDGYASTSLLARLRAP
SIO_010081: AMD14_RS00205
subclass of: SO_0000673
so part of: AMD14_RS00205
location: complement(3862..5139)
location: region:3862-5139:-1
so has part: feature:3862-5139:-1:exon

WP_011052966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3862-5139:-1:exon

AMD14_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00210
old locus tag: J164_00051
old locus tag: J164_RS00215
so part of: sequence
location: complement(5272..8262)
location: region:5272-8262:-1
so has part: feature:5272-8262:-1:exon
subclass of: SO_0000010

66909167
type: Gene
SIO_000068: ncbigene

position:5272:-1
position: 5272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8262:-1
position: 8262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5272-8262:-1:exon

AMD14_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00210
old locus tag: J164_00051
old locus tag: J164_RS00215
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052967.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element TnXax1 family transposase
translation: MTTLHETAYPRLKPDPTAKELQDIYTPTAAELQCVRNIATGPATRLALLLHLKLFQRLGYFTTLIEVPERIVQHVAQTLGMRRVPADRLAGYDASGAKRGHLAQLRAFLNVCPLDAAGRDWLGTVAETAARTKHIVPDIVNVMLEELVHHRFELPAFSTLERIAIAARERVHDAHYRQIADALSPTMRTLIDNLLLTPPGSHHSDWHTLKREPKRPTNKEVRHYLRHIQRLRILAEQLPPIDVSVPKLKQFRAMARALDAAELAELVPIKRYALAAIFIRSQYRKTLDDAADLFIRLIQNLENTAQQKLIAYQLEHSKRADALIGQLREILQAYQVEGTDTERVGAIAGVLVADIALLTAECDEHMAYAGRNYLPFLLAPYGTLRPLLFNCLEIMGLRAASQDPSMERMIGAVLALRSQRRETIDAASLGVATTDLTWLSSAWRKHVMPKALAAASPGWIHRKYFELAVLAQIKDELKSGDLYIPHGERYDDYREQLVDEATLAQELDAYGEVSGVATDAADFVQGLRTELTTLADAVDARFSDNLHASMLDGRLVLKRLQGAQVTQAIATVDSAITDRLPPTSIVDVLVDTTRWLDLHVHFRPIAGTDARVDDLLRRVITTLFCYGCNLGPTQTARSVKGFSRRQISWLNLKYVTDETLDKAIVQVINMYNKFELPGYWGSGKSASADGTKWNVYEQNLLSEYHIRYGGYGGIGYYHVSDKYIALFSHFIPCGIHEAVYILDGMLANRSDIQPDTVHGDTQAQSFPVFGLAHLLGINLMPRIRNIKDLVFSRPEPGRTYENIQALFGDSIDWTLIETHVHDMLRVAISIKLGKITASTILRRLGTYSRKNKLYWAFRELGKAVRTLFLLRYIDDVEVRKTIHAATNKSEEFNGFVKWAFFGGEGIIAENVQHEQRKIVRYNQLVANLVILHNVEQMTRVLAELRDEGSNISPEVLAGLSPYRTSHINRFGDYTLDLKRQVEPIDFSRRILAATTR
SIO_010081: AMD14_RS00210
subclass of: SO_0000673
so part of: AMD14_RS00210
location: complement(5272..8262)
location: region:5272-8262:-1
so has part: feature:5272-8262:-1:exon

WP_011052967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5272-8262:-1:exon

AMD14_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00215
old locus tag: J164_00052
old locus tag: J164_RS00220
so part of: sequence
location: complement(8270..9544)
location: region:8270-9544:-1
so has part: feature:8270-9544:-1:exon
subclass of: SO_0000010

66909168
type: Gene
SIO_000068: ncbigene

position:8270:-1
position: 8270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9544:-1
position: 9544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8270-9544:-1:exon

AMD14_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00215
old locus tag: J164_00052
old locus tag: J164_RS00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052968.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MISVAQYLEAATRPNTERAYAAATRHFEIEWGGHLPTTAEQVARYLAAYAGQLALNTLRHRLAALAQWHQAHGFADPTRAPVVRKVLKGIQTVHPSQEKRATPLQLTQLGQVVDWLDGAATAAGTRDDAAGRLRHMRDRAFVLLGFWRGFRGDELVRLQVQDLELVAGEGMTCFLPHSKSDRQHAGTTYKVPALSRWCPVAATMAWVAAAALHEGPLFRAVNQWGGIAAAPLHPNSLVPLLRRIFREAGLSSPNDYSGHSLRRGFAGWANANGWDVKALMEYVGWRDVHSAMRYLDGADPFARQRIEASVSPATPPLLALAAPAPDPVPTTAVEATVTLTRFNSRVRGLAKAHRLIEQICLQPHQAQRLNADGTRYRLAIAAVDEAAFEETIAMLLDEMHRIADNHQCFLAVALRDEAGGRHWD
SIO_010081: AMD14_RS00215
subclass of: SO_0000673
so part of: AMD14_RS00215
location: complement(8270..9544)
location: region:8270-9544:-1
so has part: feature:8270-9544:-1:exon

WP_011052968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8270-9544:-1:exon

AMD14_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00220
old locus tag: J164_00053
old locus tag: J164_RS00225
so part of: sequence
location: 9736..10791
location: region:9736-10791:1
so has part: feature:9736-10791:1:exon
subclass of: SO_0000010

66909169
type: Gene
SIO_000068: ncbigene

position:9736:1
position: 9736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10791:1
position: 10791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9736-10791:1:exon

AMD14_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00220
old locus tag: J164_00053
old locus tag: J164_RS00225
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158590.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MARSGLYKSDVQRARDRLRATGTHPSVDAVRVALGNTGSKTTIHRYLRELEEEEGQSVGAKMGVSDALQDLIARLAERLHAEADTVVAQAQARFQAQLQERTQALEQARQEAGSLRTQLQRCETALQAEREAGDAARSEVARRTTELAQLEERIAGLTARLAEHDAHAKSLEHKHEHAREALEHYRTSVKDQREQEQRRHEHQVQELQVALRQANEALTAKNHDLMQLNRENGQWLERQTRLERELAQARQRADAQQRERDALRLAAAEHQALQVRWTQDVHALEGVRTELSAARTELVEERQRREHAEADTLRATVRLSTLEQLLAQLRLAHSVGEPENAIAAGAMPAGK
SIO_010081: AMD14_RS00220
subclass of: SO_0000673
so part of: AMD14_RS00220
location: 9736..10791
location: region:9736-10791:1
so has part: feature:9736-10791:1:exon

WP_011052969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9736-10791:1:exon

AMD14_RS00225
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: xopE
locus tag: AMD14_RS00225
old locus tag: J164_00054
old locus tag: J164_RS00230
so part of: sequence
location: 10924..12000
location: region:10924-12000:1
so has part: feature:10924-12000:1:exon
subclass of: SO_0000010

66909170
type: Gene
SIO_000068: ncbigene

position:10924:1
position: 10924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12000:1
position: 12000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10924-12000:1:exon

AMD14_RS00225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: xopE
locus tag: AMD14_RS00225
old locus tag: J164_00054
old locus tag: J164_RS00230
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011347479.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: XopE/AvrPphe family type III secretion system effector
translation: MGLCSSKPSVAGSPVAGSPEHYLTHTTEQTTPSTPSSPEAPMSPSLHGLVALGSSGTRRDRFRQPTLQPHEVQQAAYQLGMRLSGRPIEDASDRQRLADATETVHETRLALHRGRGNVDSDLRLSNGRSATYSSLSYCLGENDENLLAGSALAAGAGNCDHNAAINARRHAVRMEDGGQMMNVRDYEQTHLYALYQPPSSAEAEESPVVLDSWGDGPAVLLRDSHWAETYGTSTNVIERFDKRDAIDALARTNAFRAEIEDPQTDLHANARDLETAFLANPAPGDIFSAMPVIAPELAQSTRQRLQEYSPRTRQALAADAARQAYGLDNAQPISPRTTAAILQDAERLDALGRPPLSW
SIO_010081: AMD14_RS00225
subclass of: SO_0000673
so part of: AMD14_RS00225
location: 10924..12000
location: region:10924-12000:1
so has part: feature:10924-12000:1:exon

WP_040107542.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10924-12000:1:exon

AMD14_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: avrBs3
locus tag: AMD14_RS00230
old locus tag: J164_00055
old locus tag: J164_RS00235
so part of: sequence
location: 13359..16649
location: region:13359-16649:1
so has part: feature:13359-16649:1:exon
subclass of: SO_0000010

66909171
type: Gene
SIO_000068: ncbigene

position:13359:1
position: 13359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16649:1
position: 16649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13359-16649:1:exon

AMD14_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: avrBs3
locus tag: AMD14_RS00230
old locus tag: J164_00055
old locus tag: J164_RS00235
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488475.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector avirulence protein AvrBs3
translation: MDPIRSRTPSPARELLPGPQPDGVQPTADRGVSPPAGGPLDGLPARRTISRTRLPSPPAPSPAFSAGSFSDLLRQFDPSLFNTSLFDSLPPFGAHHTEAATGEWDEVQSGLRAADAPPPTMRVAVTAARPPRAKPAPRRRAAQPSDASPAAQVDLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASNIGGKQALETVQALLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGRPALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKGLPHAPALIKRTNRRIPERTSHRVADHAQVVRVLGFFQCHSHPAQAFDDAMTQFGMSRHGLLQLFRRVGVTELEARSGTLPPASQRWDRILQASGMKRAKPSPTSTQTPDQASLHAFADSLERDLDAPSPTHEGDQRRASSRKRSRSDRAVTGPSAQQSFEVRVPEQRDALHLPLSWRVKRPRTSIGGGLPDPGTPTAADLAASSTVMREQDEDPFAGAADDFPAFNEEELAWLMELLPQ
SIO_010081: AMD14_RS00230
subclass of: SO_0000673
so part of: AMD14_RS00230
location: 13359..16649
location: region:13359-16649:1
so has part: feature:13359-16649:1:exon

WP_011052972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13359-16649:1:exon

AMD14_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00235
old locus tag: J164_00056
old locus tag: J164_RS00240
so part of: sequence
location: complement(17015..18235)
location: region:17015-18235:-1
so has part: feature:17015-18235:-1:exon
subclass of: SO_0000010

66909172
type: Gene
SIO_000068: ncbigene

position:17015:-1
position: 17015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18235:-1
position: 18235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17015-18235:-1:exon

AMD14_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00235
old locus tag: J164_00056
old locus tag: J164_RS00240
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052942.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MAGTTAQKLDNQTADRFFQSGTALNRVLTEAPYLPRCSDDKTATRVRPREYAIRYPYMQVNRPGFVSWLIFDLDHTKAMIWEDAGLPAPNLIVRNRQSGHSHLYYAIPPVCTTEAARSKPIAYMKAVYEAFAARLDADTDFHSGPVAKTPGHPWWLTHELHAHIYELGELADYVDLAVSSPWGRGPQLDEVSHSRHCILFEHLRHYAYSIVNRERERGSFATFTRLLEAYAHNRNSFQKLGFMDNLAQSSLKATVKSVARWTWDRYTGSGRCHRGVMQLDKDLPLIERQRLAAARTHDVRHKATESKVRAACRLLQQKGEALTQAAIGRVAGLTRQTVATYKHVLEEVLRPIAMAILGGASGKVEDVKHGANQVSAPSQGAGVPGAASVSLELSSAGPGVVPVLDG
SIO_010081: AMD14_RS00235
subclass of: SO_0000673
so part of: AMD14_RS00235
location: complement(17015..18235)
location: region:17015-18235:-1
so has part: feature:17015-18235:-1:exon

WP_011052942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17015-18235:-1:exon

AMD14_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00240
old locus tag: J164_00057
old locus tag: J164_RS00245
so part of: sequence
location: complement(18483..18797)
location: region:18483-18797:-1
so has part: feature:18483-18797:-1:exon
subclass of: SO_0000010

66909173
type: Gene
SIO_000068: ncbigene

position:18483:-1
position: 18483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18797:-1
position: 18797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18483-18797:-1:exon

AMD14_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00240
old locus tag: J164_00057
old locus tag: J164_RS00245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918227.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParC family partition-associated protein
translation: MMLTTTASVVAPKVLKELIAAGSVSAARVEPGDKGLLILVRAGMNERVLGAARGGLRYFQSLDGAASVLQGYGIMKFDVNTEHWVPKTMVRGYKQAPASVDADE
SIO_010081: AMD14_RS00240
subclass of: SO_0000673
so part of: AMD14_RS00240
location: complement(18483..18797)
location: region:18483-18797:-1
so has part: feature:18483-18797:-1:exon

WP_005918227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18483-18797:-1:exon

AMD14_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00245
old locus tag: J164_00058
old locus tag: J164_RS00250
so part of: sequence
location: complement(18942..19265)
location: region:18942-19265:-1
so has part: feature:18942-19265:-1:exon
subclass of: SO_0000010

66909174
type: Gene
SIO_000068: ncbigene

position:18942:-1
position: 18942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19265:-1
position: 19265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18942-19265:-1:exon

AMD14_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00245
old locus tag: J164_00058
old locus tag: J164_RS00250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSMKGKPNTAQFKPPKDPTAFLEGGEADKAEKPLVAPAAVTTTPAATPPAAEETQRYGRARVQKIFNFPEELADHLRREALKRSEEKGGRVTEKDIVIEALEAFLKG
SIO_010081: AMD14_RS00245
subclass of: SO_0000673
so part of: AMD14_RS00245
location: complement(18942..19265)
location: region:18942-19265:-1
so has part: feature:18942-19265:-1:exon

WP_005918229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18942-19265:-1:exon

AMD14_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00250
old locus tag: J164_00059
old locus tag: J164_RS00255
so part of: sequence
location: complement(19262..19888)
location: region:19262-19888:-1
so has part: feature:19262-19888:-1:exon
subclass of: SO_0000010

66909175
type: Gene
SIO_000068: ncbigene

position:19262:-1
position: 19262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19888:-1
position: 19888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19262-19888:-1:exon

AMD14_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00250
old locus tag: J164_00059
old locus tag: J164_RS00255
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918230.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIFACVNTKGGVGKTTTAVHLAVMLARQGKTLLIDGDPQASAASWAAWRRETQYDPSPTTTCLAGKAILAEGKQLATGFEHVVVDAGGRDSVGLRSALLLAQSAVIPVGASNLDAAAMTDLLEVVELARDYNPELDVRVLLTRVDPRTKDAVEMLEFLAEQKLTVLPTKVCERVAFRRAIGEGATVQELGRDQAAIAEMEAFFKEVMA
SIO_010081: AMD14_RS00250
subclass of: SO_0000673
so part of: AMD14_RS00250
location: complement(19262..19888)
location: region:19262-19888:-1
so has part: feature:19262-19888:-1:exon

WP_005931726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19262-19888:-1:exon

AMD14_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00255
old locus tag: J164_00060
old locus tag: J164_RS00260
so part of: sequence
location: 20344..20652
location: region:20344-20652:1
so has part: feature:20344-20652:1:exon
subclass of: SO_0000010

66909176
type: Gene
SIO_000068: ncbigene

position:20344:1
position: 20344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20652:1
position: 20652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20344-20652:1:exon

AMD14_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00255
old locus tag: J164_00060
old locus tag: J164_RS00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017115804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTIELSKLVEQQLVLLQPERLEVIGLMRNGWEMALRVRPGLAPTCWLEKNEIGSGGESKSVDIETFNVLVDRGVFRVKNIGCRVNIYALSDAYCLADELSP
SIO_010081: AMD14_RS00255
subclass of: SO_0000673
so part of: AMD14_RS00255
location: 20344..20652
location: region:20344-20652:1
so has part: feature:20344-20652:1:exon

WP_015462607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20344-20652:1:exon

AMD14_RS22445
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22445
old locus tag: J164_00061
so part of: sequence
location: 20649..20858
location: region:20649-20858:1
so has part: feature:20649-20858:1:exon
subclass of: SO_0000010

66913356
type: Gene
SIO_000068: ncbigene

position:20649:1
position: 20649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20858:1
position: 20858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20649-20858:1:exon

AMD14_RS22445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22445
old locus tag: J164_00061
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKPDASHHDPRPEYLRSRIQRAGLSQRQAADRIGISERLLRYYLVAEKHPSYRAAPYPVQFALEKLAED
SIO_010081: AMD14_RS22445
subclass of: SO_0000673
so part of: AMD14_RS22445
location: 20649..20858
location: region:20649-20858:1
so has part: feature:20649-20858:1:exon

WP_015462608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20649-20858:1:exon

AMD14_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00260
old locus tag: J164_00062
old locus tag: J164_RS00265
so part of: sequence
location: complement(21253..21606)
location: region:21253-21606:-1
so has part: feature:21253-21606:-1:exon
subclass of: SO_0000010

66909177
type: Gene
SIO_000068: ncbigene

position:21253:-1
position: 21253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21606:-1
position: 21606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21253-21606:-1:exon

AMD14_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00260
old locus tag: J164_00062
old locus tag: J164_RS00265
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELLQDADALVRRFEQADEALTGKIEKATTDAAGKAFLAAKLNFESVIDKNAEKLTEAGRHAAAQIGNQLNSGAAQVVAANAAFESKARRFVLLLAGFAFVAGVVGGFVGAKLAGM
SIO_010081: AMD14_RS00260
subclass of: SO_0000673
so part of: AMD14_RS00260
location: complement(21253..21606)
location: region:21253-21606:-1
so has part: feature:21253-21606:-1:exon

WP_039700904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:21253-21606:-1:exon

AMD14_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: stbB
locus tag: AMD14_RS00265
old locus tag: J164_00063
old locus tag: J164_RS00270
pseudo: true
so part of: sequence
location: complement(21655..22364)
location: region:21655-22364:-1
so has part: feature:21655-22364:-1:exon
subclass of: SO_0000010

66909178
type: Gene
SIO_000068: ncbigene

position:21655:-1
position: 21655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22364:-1
position: 22364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21655-22364:-1:exon

AMD14_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: stbB
locus tag: AMD14_RS00265
old locus tag: J164_00063
old locus tag: J164_RS00270
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172642.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: StbB family protein
SIO_010081: AMD14_RS00265
subclass of: SO_0000673
so part of: AMD14_RS00265
location: complement(21655..22364)
location: region:21655-22364:-1
so has part: feature:21655-22364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:21655-22364:-1:exon

AMD14_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00270
old locus tag: J164_00064
old locus tag: J164_RS00275
so part of: sequence
location: complement(22361..22807)
location: region:22361-22807:-1
so has part: feature:22361-22807:-1:exon
subclass of: SO_0000010

66909179
type: Gene
SIO_000068: ncbigene

position:22361:-1
position: 22361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22807:-1
position: 22807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22361-22807:-1:exon

AMD14_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00270
old locus tag: J164_00064
old locus tag: J164_RS00275
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKSDLTQALTAIEPKTKAAKVREVMPVIEQRIAAGVRIADILKTLKDSGIDLTEATLKSYLYRYRKKHQAKTKGQQSASQTVGMPAPPQPGESESVSHETDSAETPPSRGPISMQELDRVMKPDPEEQAKDIARYERLAKEKWRKHK
SIO_010081: AMD14_RS00270
subclass of: SO_0000673
so part of: AMD14_RS00270
location: complement(22361..22807)
location: region:22361-22807:-1
so has part: feature:22361-22807:-1:exon

WP_011052937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22361-22807:-1:exon

AMD14_RS00275
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00275
old locus tag: J164_00065
old locus tag: J164_RS00280
so part of: sequence
location: 23155..23550
location: region:23155-23550:1
so has part: feature:23155-23550:1:exon
subclass of: SO_0000010

66909180
type: Gene
SIO_000068: ncbigene

position:23155:1
position: 23155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23550:1
position: 23550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23155-23550:1:exon

AMD14_RS00275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00275
old locus tag: J164_00065
old locus tag: J164_RS00280
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007966864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSGKSIPVWYSEEDRRRVEEAAALAGYKHLSKYIRDKSLDRGSHRESGRDSMEAWADRQELVGRLAEIERSQKGAHALLAMLLFLVRKKATTGELNELVLACETVGVPADVLAVSLPELAALLTRFTEDS
SIO_010081: AMD14_RS00275
subclass of: SO_0000673
so part of: AMD14_RS00275
location: 23155..23550
location: region:23155-23550:1
so has part: feature:23155-23550:1:exon

WP_011052973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23155-23550:1:exon

AMD14_RS24935
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS24935
old locus tag: J164_00066
pseudo: true
so part of: sequence
location: 23550..23723
location: region:23550-23723:1
so has part: feature:23550-23723:1:exon
subclass of: SO_0000010

66913577
type: Gene
SIO_000068: ncbigene

position:23723:1
position: 23723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23550-23723:1:exon

AMD14_RS24935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS24935
old locus tag: J164_00066
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017166603.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMD14_RS24935
subclass of: SO_0000673
so part of: AMD14_RS24935
location: 23550..23723
location: region:23550-23723:1
so has part: feature:23550-23723:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23550-23723:1:exon

AMD14_RS22450
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22450
old locus tag: J164_00067
pseudo: true
so part of: sequence
location: complement(23815..>24110)
location: region:23815-24110:-1
so has part: feature:23815-24110:-1:exon
subclass of: SO_0000010

66913357
type: Gene
SIO_000068: ncbigene

position:23815:-1
position: 23815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24110:-1
position: 24110
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23815-24110:-1:exon

AMD14_RS22450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22450
old locus tag: J164_00067
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003159187.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMD14_RS22450
subclass of: SO_0000673
so part of: AMD14_RS22450
location: complement(23815..>24110)
location: region:23815-24110:-1
so has part: feature:23815-24110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23815-24110:-1:exon

AMD14_RS00280
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00280
old locus tag: J164_00068
old locus tag: J164_RS00285
so part of: sequence
location: 24428..24778
location: region:24428-24778:1
so has part: feature:24428-24778:1:exon
subclass of: SO_0000010

66909181
type: Gene
SIO_000068: ncbigene

position:24428:1
position: 24428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24778:1
position: 24778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24428-24778:1:exon

AMD14_RS00280
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00280
old locus tag: J164_00068
old locus tag: J164_RS00285
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164032.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MVSHEMGHLYLDQGWVLGTREDYIAKACTNEGRAVLNNSTARNEILDTSQGGADISLIAANAPALLSTIAAGGADLAQRVGDAFCEVNVTSTTGENYKVYYGNEYDKLNPPSQEEQ
SIO_010081: AMD14_RS00280
subclass of: SO_0000673
so part of: AMD14_RS00280
location: 24428..24778
location: region:24428-24778:1
so has part: feature:24428-24778:1:exon

WP_015462612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24428-24778:1:exon

AMD14_RS22460
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22460
so part of: sequence
location: 24977..25318
location: region:24977-25318:1
so has part: feature:24977-25318:1:exon
subclass of: SO_0000010

66913358
type: Gene
SIO_000068: ncbigene

position:24977:1
position: 24977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25318:1
position: 25318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24977-25318:1:exon

AMD14_RS22460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158765.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTNGQEPRKTSKQIAPSLFASNAVVVMGADNRADSASFEVTGSCVSMAALRKQYARLIVMDYARGVNEHAVYTLGAQIGDAIVAYSFPASKLDCMSRVFITPAKITKNKLGIA
SIO_010081: AMD14_RS22460
subclass of: SO_0000673
so part of: AMD14_RS22460
location: 24977..25318
location: region:24977-25318:1
so has part: feature:24977-25318:1:exon

WP_031425612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24977-25318:1:exon

AMD14_RS00290
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00290
old locus tag: J164_00071
old locus tag: J164_RS00295
so part of: sequence
location: 25577..27151
location: region:25577-27151:1
so has part: feature:25577-27151:1:exon
subclass of: SO_0000010

66909182
type: Gene
SIO_000068: ncbigene

position:25577:1
position: 25577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27151:1
position: 27151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25577-27151:1:exon

AMD14_RS00290
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00290
old locus tag: J164_00071
old locus tag: J164_RS00295
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164708.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system DNA-binding domain-containing protein
translation: MQKHEVESATLLFGVGLPLAGWLAGTYIGNVPLSPFPQALTAALHATPNNPFIVGGVVAGLALAASAAYLFHEYGDDGFRGAPYRRWMRGSKMANWHKVKSQVNAANRGENRRRRAEQRGAKDLPPVMIGPIPMPLHLENRNTLICASIGAGKSVAMESMISSAVKRRDKMAVIDPNGTFYSKFSFPGDTILNPFDRRSSGWTLFNEIKGVHDFDRMAKSVIPPQIDPSDEQWCAYARDVLADTMRKLVETNNPDQDTLVNLLVREDGEVIRAFLVNTDSQGYFRDNAEKAIASIQFMMNKYVRPLSFMTKGDFSLHKWVNDPNAGNLFVTWREDMRAAQRPLVATWIDTICATILSISDDAQHLSRRLWLFLDELESLGRLESFVPAATKGRKHGLRMAASIQDWAQLDETYGKDAAKTLLGCFRNYLIFGASNALNADKASEILGKQHVERIQITTNAGGIGGGGRSRHVIASPPEPVVLDSEISNLKDLEGYVMFAEDFPIAKIKLPYVKYPHRAAAIDIK
SIO_010081: AMD14_RS00290
subclass of: SO_0000673
so part of: AMD14_RS00290
location: 25577..27151
location: region:25577-27151:1
so has part: feature:25577-27151:1:exon

WP_011052977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25577-27151:1:exon

AMD14_RS00295
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: mobF
locus tag: AMD14_RS00295
old locus tag: J164_00072
old locus tag: J164_RS00300
so part of: sequence
location: 27165..30140
location: region:27165-30140:1
so has part: feature:27165-30140:1:exon
subclass of: SO_0000010

66909183
type: Gene
SIO_000068: ncbigene

position:27165:1
position: 27165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30140:1
position: 30140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27165-30140:1:exon

AMD14_RS00295
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: mobF
locus tag: AMD14_RS00295
old locus tag: J164_00072
old locus tag: J164_RS00300
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017157753.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobF family relaxase
translation: MLNVTPIRGNNQYAAAHYFSAADDYYAKENPGEWQGQGAQVLGLTGPVEQAQLSRLLDGRLPNGERIQTTFDPTDNKKRMGLDLTFSAPKSVSMQALVAGDKDVTAAHDRAVTRALEQVERLAEARKKVKGKSYRERTGNMVIGKFRHEMSRAKDPQLHTHSVVLNMTQRADGAWRALSNEDIFRVQHEVDALYKAELARGLQALGYAIRLVDDQGNFELDHISRDQIEAFSARSRLIEEALANEGKTRATATTLEKQIISLATRPRKDESDRDLVKQYWVEKSREFGIDYGPRSQLDGRTYEAGDSFGGRGRERGDAGDRIAATSLPARLTPAQAVVQYAINHLTEREAVVRETALTATALRRAVGLAGPDEVRAEIKRLVGQGALIEAMPAYRMADRKDGPALSSAGWKSYLQDLKGWSDKQAQQYVSNAIKQGSLVPAEKRYTTQKALAREKAILAIERTGRGAIEPIMTAAAVKTALESSALNAGQRFAVETIVSTKNRFVGIQGDAGTGRTYTVNQAVALIKQASAVSEGYRTVALAPYGNQVKALKNEGLEAHTLASFLHTKDKPIDGKTIIVLDESGVVGARQMEQVMRIVEKSGARMVLLGDTKQTEAIEAGKPFAQLQQDGMQTARISEIQRQKDHELKTAVEQAAEGRVTQSLAHIKHVEELKEPTERHRAIVNDYIQLTEPERRETLIVAGTNEARREINRMVRESLDLTGKGREFETLTRVDLTQAQRRFAPSYQPGMVIQPEKDYQKAGLTRGQTYRVKEALPGNALVLQRQDGTTTTINPRKATQLSVYHLERAELSIGDTVRINRNDPGRDLTNGDRMRVAGVIGGTVKLESVEQRDGRPARALELPTNRPLHLEHAYASTVHSAQGLTNDRALIALDTKSRTTSMNLYYVAISRARQEARVYTNNRGELPAAIARRFDKTTALAIQRERQLQRRAAGMQPKGTADGKQALQRQQLQQQRKQPASGKKPSEYGRFG
SIO_010081: AMD14_RS00295
subclass of: SO_0000673
so part of: AMD14_RS00295
location: 27165..30140
location: region:27165-30140:1
so has part: feature:27165-30140:1:exon

WP_011052978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27165-30140:1:exon

AMD14_RS00300
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00300
old locus tag: J164_00073
old locus tag: J164_RS00305
so part of: sequence
location: complement(30194..30520)
location: region:30194-30520:-1
so has part: feature:30194-30520:-1:exon
subclass of: SO_0000010

66909184
type: Gene
SIO_000068: ncbigene

position:30194:-1
position: 30194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30520:-1
position: 30520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30194-30520:-1:exon

AMD14_RS00300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00300
old locus tag: J164_00073
old locus tag: J164_RS00305
EC number: 3.1.-.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019303585.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MMRGDFVTIAMQGDFGKPRPALVIQADQFDAHTTVTVLPVTSTLVAAPLLRITVHPSTDNGLQKPSQVMVDKAMTVKRDKVGRAFGRVDADALVEIERCLAVFLGIAK
SIO_010081: AMD14_RS00300
subclass of: SO_0000673
so part of: AMD14_RS00300
location: complement(30194..30520)
location: region:30194-30520:-1
so has part: feature:30194-30520:-1:exon

WP_015462614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30194-30520:-1:exon

AMD14_RS00305
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00305
old locus tag: J164_00074
old locus tag: J164_RS00310
so part of: sequence
location: complement(30517..30687)
location: region:30517-30687:-1
so has part: feature:30517-30687:-1:exon
subclass of: SO_0000010

66909185
type: Gene
SIO_000068: ncbigene

position:30517:-1
position: 30517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30687:-1
position: 30687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30517-30687:-1:exon

AMD14_RS00305
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00305
old locus tag: J164_00074
old locus tag: J164_RS00310
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158763.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin MazE family protein
translation: MAGLRPVQIWVPDTRRPDFAEECRRQCRLAAQADMADTDMQRFMDEALADMDGWTE
SIO_010081: AMD14_RS00305
subclass of: SO_0000673
so part of: AMD14_RS00305
location: complement(30517..30687)
location: region:30517-30687:-1
so has part: feature:30517-30687:-1:exon

WP_017157755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30517-30687:-1:exon

AMD14_RS00310
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00310
old locus tag: J164_00075
old locus tag: J164_RS00315
so part of: sequence
location: complement(30872..31258)
location: region:30872-31258:-1
so has part: feature:30872-31258:-1:exon
subclass of: SO_0000010

66909186
type: Gene
SIO_000068: ncbigene

position:30872:-1
position: 30872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31258:-1
position: 31258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30872-31258:-1:exon

AMD14_RS00310
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00310
old locus tag: J164_00075
old locus tag: J164_RS00315
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003491149.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKVTTILLDTAGEIAHRMAISMNALMLTVAAEARQDMAREHGADWAAGAVTFFGTEILKAFQSNKPDRDREMERSMMSLAMAVWVCDSVYGGLAAETFVASDLRFTITHDGIVRYDRLPKPDDRADHQ
SIO_010081: AMD14_RS00310
subclass of: SO_0000673
so part of: AMD14_RS00310
location: complement(30872..31258)
location: region:30872-31258:-1
so has part: feature:30872-31258:-1:exon

WP_003491149.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30872-31258:-1:exon

AMD14_RS00315
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00315
old locus tag: J164_00076
old locus tag: J164_RS00320
so part of: sequence
location: complement(31335..31754)
location: region:31335-31754:-1
so has part: feature:31335-31754:-1:exon
subclass of: SO_0000010

66909187
type: Gene
SIO_000068: ncbigene

position:31335:-1
position: 31335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31754:-1
position: 31754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31335-31754:-1:exon

AMD14_RS00315
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00315
old locus tag: J164_00076
old locus tag: J164_RS00320
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052981.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNNAEIMKIQVNALTPELVTELVALQQEAERFFSIQQSYAKVIFDVFDGAELLTPDSLAKVNNAMMIAYQMTANVQKRMHALRGKLPKGYRDENGHFWNARTFELLRDTQKDFDKAVKTAKKISGWASVKIDGTSYPEQ
SIO_010081: AMD14_RS00315
subclass of: SO_0000673
so part of: AMD14_RS00315
location: complement(31335..31754)
location: region:31335-31754:-1
so has part: feature:31335-31754:-1:exon

WP_011052981.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31335-31754:-1:exon

AMD14_RS00320
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00320
old locus tag: J164_00077
old locus tag: J164_RS00325
so part of: sequence
location: complement(31880..32758)
location: region:31880-32758:-1
so has part: feature:31880-32758:-1:exon
subclass of: SO_0000010

66909188
type: Gene
SIO_000068: ncbigene

position:31880:-1
position: 31880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32758:-1
position: 32758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31880-32758:-1:exon

AMD14_RS00320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00320
old locus tag: J164_00077
old locus tag: J164_RS00325
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019303580.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: lytic transglycosylase domain-containing protein
translation: MAAGLLAAVPLFAGAQTPAQPLAFEKLAAECAPDVHPTTLKGVVSTESSWNPYAIGVVGGRLDRQPRSLAEAVATARELERQGFNFSMGLGQVNRYNLAKYGESYETVFEPCRNLKAGSVILKDCFQRAKAQMGDDQQALRAAFSCYYSGNFTRGFRPDKAGQPSYVQKVVAKATGAAQPIPVVPAVKPESSVAVRPAGRPAGPAKQAAAPSEWVIFADGAQPSGQSVAPTHAESAKEPAVQVQLVTPVAAPAATAGRAERVQTQREAQAVPVQRATANSAQQDAPFVQFVN
SIO_010081: AMD14_RS00320
subclass of: SO_0000673
so part of: AMD14_RS00320
location: complement(31880..32758)
location: region:31880-32758:-1
so has part: feature:31880-32758:-1:exon

WP_011052982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31880-32758:-1:exon

AMD14_RS00325
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: virB11
locus tag: AMD14_RS00325
old locus tag: J164_00078
old locus tag: J164_RS00330
so part of: sequence
location: complement(32769..33791)
location: region:32769-33791:-1
so has part: feature:32769-33791:-1:exon
subclass of: SO_0000010

66909189
type: Gene
SIO_000068: ncbigene

position:32769:-1
position: 32769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33791:-1
position: 33791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32769-33791:-1:exon

AMD14_RS00325
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: virB11
locus tag: AMD14_RS00325
old locus tag: J164_00078
old locus tag: J164_RS00330
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008343655.1
GO component: GO:0043684 - type IV secretion system complex [Evidence IEA]
GO process: GO:0044097 - secretion by the type IV secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type DNA transfer ATPase VirB11
translation: MSQIASFRTKLSLLADYLDDKQVTEIQVNKPGELWLRKKDAYYAEQIEVPGLTYQLLSSLAEVTASFKSLEVDRDSPILSAEIPVNLDDGVPDFERGTYRTEMILPPVVPEGTIAMTIRKQSLVRMSLPKYREQGAFRFVNSDVLDEPYSDARLLDLYRANEWDEFLRGAVLAHKNIVISAGTYCGKTTCLNALVQEIPAHERIVTIEDSREIEPAQPNCVRLSYARHQASGQAAVTPTTLLRSCMRLTPDRVIMGEIRGPEAVEFLNMLNTGHKGSLTTIHTDSPAEMYDRFGELMDGHTSMTREQVIARVKRRIDVVVQWKYTERNGRYISEIIYAGA
SIO_010081: AMD14_RS00325
subclass of: SO_0000673
so part of: AMD14_RS00325
location: complement(32769..33791)
location: region:32769-33791:-1
so has part: feature:32769-33791:-1:exon

WP_011052983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32769-33791:-1:exon

AMD14_RS00330
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00330
old locus tag: J164_00079
old locus tag: J164_RS00335
so part of: sequence
location: complement(33802..35022)
location: region:33802-35022:-1
so has part: feature:33802-35022:-1:exon
subclass of: SO_0000010

66909190
type: Gene
SIO_000068: ncbigene

position:33802:-1
position: 33802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35022:-1
position: 35022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33802-35022:-1:exon

AMD14_RS00330
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00330
old locus tag: J164_00079
old locus tag: J164_RS00335
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005931779.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbI/VirB10 family protein
translation: MSDQTNKPQEDREAAVREWEKQANASLVADDRKKKMSGIAIAAIAAVGLGAVWYMKHGGSEPAKPVGNSELSIPERKPVPKLKEQESASAAAVTSTPAATPANATQADDPMKAQREQMEMQRQEQERRMLEARRKSAIIPPNSNNQAAASAQPAGDSGDQGQSNAGMLGGGSGDRGAQDPNSRFARAVSGDDVAVSKANQIDNLPYKVLQGKLIEAVLEPRAISDLPGMVCATVQRDVYGAQDRNKLIPWGSRVCGVYSAEVRKGQDRLFVIWNTVRRPDGVQVALDSAGADQLGTAGMGGIVDTHFAGIFGTSALLSIIGAGASNAGVSSGDQYNSAAAYRQSVQQAAAQTSQSVLQPYINIPPTITVPAGSRVRIYVNKDLDFTAIYKDEIDGAKRGDGVTFIQ
SIO_010081: AMD14_RS00330
subclass of: SO_0000673
so part of: AMD14_RS00330
location: complement(33802..35022)
location: region:33802-35022:-1
so has part: feature:33802-35022:-1:exon

WP_011052984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33802-35022:-1:exon

AMD14_RS00335
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: virB9
locus tag: AMD14_RS00335
old locus tag: J164_00080
old locus tag: J164_RS00340
so part of: sequence
location: complement(35024..35806)
location: region:35024-35806:-1
so has part: feature:35024-35806:-1:exon
subclass of: SO_0000010

66909191
type: Gene
SIO_000068: ncbigene

position:35024:-1
position: 35024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35806:-1
position: 35806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35024-35806:-1:exon

AMD14_RS00335
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: virB9
locus tag: AMD14_RS00335
old locus tag: J164_00080
old locus tag: J164_RS00340
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345603.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: P-type conjugative transfer protein VirB9
translation: MKFNPVPLAVALIAGTSISLAWVPAHAAKLPHSLVTDDRVKQVPYDPNQVYEIVGTYGYQTSIEFANDETVKVVTLGDSIAWQTVPYQNRLFLKPVEPNAATNLTVITDKRTYYFKLTSSKSQAAMTFLVRFVYPNSNVKTYAGAGSSQRMSNGFDPAKLNLGYGTSGNKTAIPLKRAFDDGQFTYFMFDQNAEIPSVYTVGPDGTETIVNTRREGQYLVVERTASLFTLRNGNSHLCVQNNANPYKRAVSGPVSTVGGN
SIO_010081: AMD14_RS00335
subclass of: SO_0000673
so part of: AMD14_RS00335
location: complement(35024..35806)
location: region:35024-35806:-1
so has part: feature:35024-35806:-1:exon

WP_011052985.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35024-35806:-1:exon

AMD14_RS00340
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00340
old locus tag: J164_00081
old locus tag: J164_RS00345
so part of: sequence
location: complement(35831..36505)
location: region:35831-36505:-1
so has part: feature:35831-36505:-1:exon
subclass of: SO_0000010

66909192
type: Gene
SIO_000068: ncbigene

position:35831:-1
position: 35831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36505:-1
position: 36505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35831-36505:-1:exon

AMD14_RS00340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00340
old locus tag: J164_00081
old locus tag: J164_RS00345
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019303576.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MKFGKKTFLGDKETQSAQLGGSNKLKQERNRAYLLIGLLLFVVGGMASAVTVLANIHTVIPVVSVIDANGHVVKQQVVNKEAITGQESFVQSQVYDFIMYCNTFDPDWRQHFADLCRLHSTQTVAGQYDAETSPDNPNNPYYQLGQGGRRYPKITGITSLGKDAYQVSFQSITEKAGSPPKTDYYTALVRYTFTFKPLALGDRWENALGYATTAYRKDQELSRQ
SIO_010081: AMD14_RS00340
subclass of: SO_0000673
so part of: AMD14_RS00340
location: complement(35831..36505)
location: region:35831-36505:-1
so has part: feature:35831-36505:-1:exon

WP_011052986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35831-36505:-1:exon

AMD14_RS00345
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00345
old locus tag: J164_00082
old locus tag: J164_RS00350
so part of: sequence
location: complement(36502..37368)
location: region:36502-37368:-1
so has part: feature:36502-37368:-1:exon
subclass of: SO_0000010

66909193
type: Gene
SIO_000068: ncbigene

position:36502:-1
position: 36502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37368:-1
position: 37368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36502-37368:-1:exon

AMD14_RS00345
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00345
old locus tag: J164_00082
old locus tag: J164_RS00350
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167764.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MANMTLQGLLGAADGVTQSFLSQTYPAIAGAISTPITYAAMLYWALHGYKVYAGHSPMQWKDLLAKTVMTVAVFGTLNWGGLAQKLYNAFVSFMEGAAATIMAGKPTSQMLDALYSNVGKVSDTLRSADSYQIGMILDGLVLFVLNCILFVLALAYMTIAKFGLAITMVLCPLFLCFLMFPETRQWFMNWVSKMLTFCFMYILVIAIVRFGFLAFGDAIDEAGKAAQAASPDLVTSEQTAQLVIVEGVLILFMLGVRGWASALSGGASSSTGTLVMIARMVMTKGAGK
SIO_010081: AMD14_RS00345
subclass of: SO_0000673
so part of: AMD14_RS00345
location: complement(36502..37368)
location: region:36502-37368:-1
so has part: feature:36502-37368:-1:exon

WP_011052987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36502-37368:-1:exon

AMD14_RS00350
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00350
old locus tag: J164_00083
old locus tag: J164_RS00355
so part of: sequence
location: complement(37370..37750)
location: region:37370-37750:-1
so has part: feature:37370-37750:-1:exon
subclass of: SO_0000010

66909194
type: Gene
SIO_000068: ncbigene

position:37370:-1
position: 37370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37750:-1
position: 37750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37370-37750:-1:exon

AMD14_RS00350
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00350
old locus tag: J164_00083
old locus tag: J164_RS00355
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015462616.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRNVWMIVSGLAVVVAIGGAVYYFFPKQSAATTSNVPQPPSTDNRVLVVPAGNPLLKADKAQFRQWLPPYCGADIFLQSQPEPHKVDVCVNGTVQRVASATGIKLSRADVLDSRVKAHWREVMGAK
SIO_010081: AMD14_RS00350
subclass of: SO_0000673
so part of: AMD14_RS00350
location: complement(37370..37750)
location: region:37370-37750:-1
so has part: feature:37370-37750:-1:exon

WP_015462616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37370-37750:-1:exon

AMD14_RS00355
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00355
old locus tag: J164_00084
old locus tag: J164_RS00360
so part of: sequence
location: complement(37743..37955)
location: region:37743-37955:-1
so has part: feature:37743-37955:-1:exon
subclass of: SO_0000010

66909195
type: Gene
SIO_000068: ncbigene

position:37743:-1
position: 37743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37955:-1
position: 37955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37743-37955:-1:exon

AMD14_RS00355
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00355
old locus tag: J164_00084
old locus tag: J164_RS00360
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015462617.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MQLFFALLPGLILFWPLLKLIQKGWRLFAVLFFAALISGCASTSNKFNKSPCASKFENVNTDNYGSQSDA
SIO_010081: AMD14_RS00355
subclass of: SO_0000673
so part of: AMD14_RS00355
location: complement(37743..37955)
location: region:37743-37955:-1
so has part: feature:37743-37955:-1:exon

WP_015462617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37743-37955:-1:exon

AMD14_RS00360
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00360
old locus tag: J164_00085
old locus tag: J164_RS00365
so part of: sequence
location: complement(38003..38671)
location: region:38003-38671:-1
so has part: feature:38003-38671:-1:exon
subclass of: SO_0000010

66909196
type: Gene
SIO_000068: ncbigene

position:38003:-1
position: 38003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38671:-1
position: 38671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38003-38671:-1:exon

AMD14_RS00360
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00360
old locus tag: J164_00085
old locus tag: J164_RS00365
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167931.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type IV secretion system protein
translation: MTMKKPLVALAVAASLGASVPTFATGMPTFDAAAVLQLQQQFQQLQEQYKTLKDQYAAVTGSYGRGQIGLGDSINAASVVPGSWQEVVAQQQSGAFGSKQAAYEKLINTMPQDLFANPQAQNATTYKMSTDAVRAALAGGDSLYAEVQTHLNNLARMSQQVDATVNIKDAQDLQNRIAGENGMMQSAMAKLNAMNMNLQANMVNQQNQATAATQKYFRRTGQ
SIO_010081: AMD14_RS00360
subclass of: SO_0000673
so part of: AMD14_RS00360
location: complement(38003..38671)
location: region:38003-38671:-1
so has part: feature:38003-38671:-1:exon

WP_015462618.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38003-38671:-1:exon

AMD14_RS00365
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00365
old locus tag: J164_00086
old locus tag: J164_RS00370
so part of: sequence
location: complement(38668..41301)
location: region:38668-41301:-1
so has part: feature:38668-41301:-1:exon
subclass of: SO_0000010

66909197
type: Gene
SIO_000068: ncbigene

position:38668:-1
position: 38668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41301:-1
position: 41301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38668-41301:-1:exon

AMD14_RS00365
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00365
old locus tag: J164_00086
old locus tag: J164_RS00370
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005931796.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type VI secretion protein
translation: MSLSMPVPEGADAAAKEMALSDMIPYTVHYDDESVITKDDGLVQVIKLDGLYFESLTAEQIKQFERRRNTVLRSIANSDRGVYVHLIRRKVNLYPAGEGGTWFARRFNQAWRERYNKRSFYVNEIYISIVRNRFRQGAPGILDRAFSLVSGSKITKEDLESFEEQAKDVNEAANLVVQTLSGYGARKLRIQRRPEFVLDRVSRADAQVAVERFKMSWQEFQRSHGHHEVYSRDEVLDYLGEDFSEIGGFLHYLVNLEDERVPVTEMQLDRTLAVSYLDFKMLSNMMAVQNLSGTRAGAMLSMAEWPARTPSRMLDEFLKQPVEYIITQSFFFTDRISAEHDMRQERRRIAVNDREGVAEEDKDEITKGLQDLTRGRSVNGLHHLTMLVHVPATTQFADPIENKRQTIADLDGAVGLLKKAFVNLGVKPVREWFAMETFFWAQLPGQAQHFMGRRGKIKSGNFAGFASLHNFAVGKIDGNLWGPAIMPFETESGTAYYFSFHREMEGMVAGHTAFTADTGAGKTTLLAALIAMGDKAYPRVFWFDNREGAKVFMCAMGGQHTTLTVQGSTGWNPMKLPDTPENRAYLVELLTLMRTCYGGKIVPDDIDRFKKAVHENYALAYPDRRLLNVAWCFGQGELAKDMRVWHGANGIEGANWGVFDNEHDNIDLTNCRHYCYEMRQLIKDGTARPELPVVLSYPFHRIEQSMNGEPFILVLEEGQNLVKHAYWREKIDSYIMQIRRKNGLLVFVTPDAKYLYCETDSIQKQTATKIYLPNGEAKRTDLVDVLGLTPAEYEFVRDTPPENRTFLIRRGNESIKAKFDLSDMPEFIPVLSSNDKGVALMEEIIRELETDDPEQWVPVFMERALAKNTHNLKQKGA
SIO_010081: AMD14_RS00365
subclass of: SO_0000673
so part of: AMD14_RS00365
location: complement(38668..41301)
location: region:38668-41301:-1
so has part: feature:38668-41301:-1:exon

WP_011052991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38668-41301:-1:exon

AMD14_RS00370
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00370
old locus tag: J164_00087
old locus tag: J164_RS00375
so part of: sequence
location: complement(41324..41623)
location: region:41324-41623:-1
so has part: feature:41324-41623:-1:exon
subclass of: SO_0000010

66909198
type: Gene
SIO_000068: ncbigene

position:41324:-1
position: 41324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41623:-1
position: 41623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41324-41623:-1:exon

AMD14_RS00370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00370
old locus tag: J164_00087
old locus tag: J164_RS00375
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003490875.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: VirB3 family type IV secretion system protein
translation: MSADEQFHDEGESLVAAMTRPTMVGGLTLASLAMSFYFPGMAALITRSLWAAALIPVLLLISYLVCLKDVYLFDIMSAATHLKTCPNKRFWGCRRYAPR
SIO_010081: AMD14_RS00370
subclass of: SO_0000673
so part of: AMD14_RS00370
location: complement(41324..41623)
location: region:41324-41623:-1
so has part: feature:41324-41623:-1:exon

WP_003490875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41324-41623:-1:exon

AMD14_RS00375
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00375
old locus tag: J164_00088
old locus tag: J164_RS00380
so part of: sequence
location: complement(41620..41997)
location: region:41620-41997:-1
so has part: feature:41620-41997:-1:exon
subclass of: SO_0000010

66909199
type: Gene
SIO_000068: ncbigene

position:41620:-1
position: 41620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41997:-1
position: 41997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41620-41997:-1:exon

AMD14_RS00375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00375
old locus tag: J164_00088
old locus tag: J164_RS00380
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017164441.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrbC/VirB2 family protein
translation: MEKNEAIEKDTTAGPRKGDKVDRVLDLAANVLVMALVFLPQLAYAQDVGGTFGGITAFLKSITQLLIYEWGYYIGIITLAIQGYRWKSGRIDLMTLGGWGLGIGLVFFAPNIVSDLKARSSGSIQ
SIO_010081: AMD14_RS00375
subclass of: SO_0000673
so part of: AMD14_RS00375
location: complement(41620..41997)
location: region:41620-41997:-1
so has part: feature:41620-41997:-1:exon

WP_011052992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41620-41997:-1:exon

AMD14_RS00380
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00380
old locus tag: J164_00089
old locus tag: J164_RS00385
so part of: sequence
location: complement(42018..42308)
location: region:42018-42308:-1
so has part: feature:42018-42308:-1:exon
subclass of: SO_0000010

66909200
type: Gene
SIO_000068: ncbigene

position:42018:-1
position: 42018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42308:-1
position: 42308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42018-42308:-1:exon

AMD14_RS00380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00380
old locus tag: J164_00089
old locus tag: J164_RS00385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003490957.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFFNDEEAMLTLTKKELAVLDEAQPDYAVYLVETEHENSRWWRMTLKLPTQDKVYEVVTALGKTKLWKRLDIAVDFIKESCPHTKSVFVVFAPWHN
SIO_010081: AMD14_RS00380
subclass of: SO_0000673
so part of: AMD14_RS00380
location: complement(42018..42308)
location: region:42018-42308:-1
so has part: feature:42018-42308:-1:exon

WP_003490957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42018-42308:-1:exon

AMD14_RS24460
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS24460
old locus tag: J164_00090
so part of: sequence
location: 42621..42836
location: region:42621-42836:1
so has part: feature:42621-42836:1:exon
subclass of: SO_0000010

66913500
type: Gene
SIO_000068: ncbigene

position:42621:1
position: 42621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42836:1
position: 42836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42621-42836:1:exon

AMD14_RS24460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS24460
old locus tag: J164_00090
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNITLPADLPGSVVQKFIDPIDRAAFFGRLSNSMMVRALLELALEHADAYDASAIKDYESLKAELRRTLKS
SIO_010081: AMD14_RS24460
subclass of: SO_0000673
so part of: AMD14_RS24460
location: 42621..42836
location: region:42621-42836:1
so has part: feature:42621-42836:1:exon

WP_155400515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:42621-42836:1:exon

AMD14_RS00390
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00390
old locus tag: J164_00091
old locus tag: J164_RS00395
pseudo: true
so part of: sequence
location: complement(43001..44087)
location: region:43001-44087:-1
so has part: feature:43001-44087:-1:exon
subclass of: SO_0000010

66909201
type: Gene
SIO_000068: ncbigene

position:43001:-1
position: 43001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44087:-1
position: 44087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:43001-44087:-1:exon

AMD14_RS00390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00390
old locus tag: J164_00091
old locus tag: J164_RS00395
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611493.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AMD14_RS00390
subclass of: SO_0000673
so part of: AMD14_RS00390
location: complement(43001..44087)
location: region:43001-44087:-1
so has part: feature:43001-44087:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:43001-44087:-1:exon

AMD14_RS00400
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00400
old locus tag: J164_00093
old locus tag: J164_RS00405
so part of: sequence
location: complement(44202..44438)
location: region:44202-44438:-1
so has part: feature:44202-44438:-1:exon
subclass of: SO_0000010

66909202
type: Gene
SIO_000068: ncbigene

position:44202:-1
position: 44202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44438:-1
position: 44438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44202-44438:-1:exon

AMD14_RS00400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00400
old locus tag: J164_00093
old locus tag: J164_RS00405
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015462622.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Wgr family protein
translation: MAGIVLRARWETAQRWYEVELAHDLLGDWVVMRRWGSKDSHRHGEKPDLVSGETEGRHAIEQIHRARLRRKPAYWRVY
SIO_010081: AMD14_RS00400
subclass of: SO_0000673
so part of: AMD14_RS00400
location: complement(44202..44438)
location: region:44202-44438:-1
so has part: feature:44202-44438:-1:exon

WP_015462622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44202-44438:-1:exon

AMD14_RS00405
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00405
old locus tag: J164_00094
old locus tag: J164_RS00410
so part of: sequence
location: complement(44442..44771)
location: region:44442-44771:-1
so has part: feature:44442-44771:-1:exon
subclass of: SO_0000010

66909203
type: Gene
SIO_000068: ncbigene

position:44442:-1
position: 44442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44771:-1
position: 44771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44442-44771:-1:exon

AMD14_RS00405
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00405
old locus tag: J164_00094
old locus tag: J164_RS00410
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167887.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TrfB-related DNA-binding protein
translation: MQFQTLANFRLTEDEFEQIASKKKMMERSLQVAREIVVEGRGVTEAAEQSGMSKQQALEIKKRFYAGYMENLLVPPDWVRASVCAPQDMLDRFLAEVEQERMKYFSQKG
SIO_010081: AMD14_RS00405
subclass of: SO_0000673
so part of: AMD14_RS00405
location: complement(44442..44771)
location: region:44442-44771:-1
so has part: feature:44442-44771:-1:exon

WP_011052996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44442-44771:-1:exon

AMD14_RS00410
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00410
old locus tag: J164_00095
old locus tag: J164_RS00415
so part of: sequence
location: complement(44823..45854)
location: region:44823-45854:-1
so has part: feature:44823-45854:-1:exon
subclass of: SO_0000010

66909204
type: Gene
SIO_000068: ncbigene

position:44823:-1
position: 44823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45854:-1
position: 45854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44823-45854:-1:exon

AMD14_RS00410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00410
old locus tag: J164_00095
old locus tag: J164_RS00415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017167886.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParB/RepB/Spo0J family partition protein
translation: MSAFGNKISKLSQIQKQGAAAALPGERIEEIDPELVDCEKQIRSKDNPGFTVESLTELGNDMKRDGQHEPAVLRKNPEKPGRYLMVAGERRWRGCKIAGIKLKAVVRDMDDEQARRVQRAENIQRENLTQLEIAVALRDDKQRLGTLEKVAAEWNKGINWVAERIKFLEVVETDGHASQAVAAGVTADITAVNDLHRLEKADPAAAKAVIEQAKADPNTNVRKVVRDKLQDAKPAAKEKGGKAGSRMREPEPATPEVDPRQQGMFDHEKQGKPAQLDPEAAQLVAFAAKQAETLCAEVSALSKMLQQRPDVVSALGDALQSVVHAQTELFRTRHALAVLAKPE
SIO_010081: AMD14_RS00410
subclass of: SO_0000673
so part of: AMD14_RS00410
location: complement(44823..45854)
location: region:44823-45854:-1
so has part: feature:44823-45854:-1:exon

WP_011052997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:44823-45854:-1:exon

AMD14_RS00415
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00415
old locus tag: J164_00096
old locus tag: J164_RS00420
so part of: sequence
location: complement(45868..46635)
location: region:45868-46635:-1
so has part: feature:45868-46635:-1:exon
subclass of: SO_0000010

66909205
type: Gene
SIO_000068: ncbigene

position:45868:-1
position: 45868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46635:-1
position: 46635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45868-46635:-1:exon

AMD14_RS00415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00415
old locus tag: J164_00096
old locus tag: J164_RS00420
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052998.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MLTLTVGNQKGGVGKSTFSVHLAFRAAERGYRVLLADIDEGDISEVFAEIEEGDNTEYLKASHLFTGEIDGRRPRQVHERIALIEADVDVLDVDDMPLEVISQPRASLGQLAADYDICIIDTPPNLQRRMLGALAASHAVVSPFNISPFSFARMPKLQATIAGVKSEYNPDLRHLGFLPNMVNSKSVNEIEALPELREAYGELIFDEAIIARACVATALAQGRAVWHHARSGNQRAAAKEMRQACDAVLARLGLN
SIO_010081: AMD14_RS00415
subclass of: SO_0000673
so part of: AMD14_RS00415
location: complement(45868..46635)
location: region:45868-46635:-1
so has part: feature:45868-46635:-1:exon

WP_011052998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:45868-46635:-1:exon

AMD14_RS00420
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00420
old locus tag: J164_00097
old locus tag: J164_RS00425
so part of: sequence
location: complement(47440..48666)
location: region:47440-48666:-1
so has part: feature:47440-48666:-1:exon
subclass of: SO_0000010

66909206
type: Gene
SIO_000068: ncbigene

position:47440:-1
position: 47440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48666:-1
position: 48666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47440-48666:-1:exon

AMD14_RS00420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00420
old locus tag: J164_00097
old locus tag: J164_RS00425
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015472949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication protein RepA
translation: MKKISELTAQPTSAEMLQWRDGYRHHLESKGIPPESAADLAAKVSYRADLYPTDLAATRPLFQVEPPTAPGEQATDAKVPPLKDSRPDKAKPTKAAKLKRVEPAALERKPKTTPATAREERLIKTAAEIAGERPDDDDRAYMHSIMCQVGLPRSKVDGTSFERHSGGAALLVEAGKLWDGKQFVQQPIPYGAMPRLMLAWMNTYAVRFNSPEIPVGDSASEFLRMLGQKNITGGERGTFTNFRKQVQALSACRMTLGFNANGRAHTYEGKPIKHFEAWINLEEKQRALWPGSVTFSQDYYLTLKDHAVPLDLRAFMELKGSALDLDVYAWLAQRLHRIEGRPVVLYWTNLRDQFGQEYQGKEADKDFKKKFLPSLRRVLAVYPDAKVKQVTGGIMLMASPPPIPYKGS
SIO_010081: AMD14_RS00420
subclass of: SO_0000673
so part of: AMD14_RS00420
location: complement(47440..48666)
location: region:47440-48666:-1
so has part: feature:47440-48666:-1:exon

WP_015472949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47440-48666:-1:exon

AMD14_RS00425
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00425
old locus tag: J164_00098
old locus tag: J164_RS00430
so part of: sequence
location: complement(48946..50133)
location: region:48946-50133:-1
so has part: feature:48946-50133:-1:exon
subclass of: SO_0000010

66909207
type: Gene
SIO_000068: ncbigene

position:48946:-1
position: 48946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50133:-1
position: 50133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48946-50133:-1:exon

AMD14_RS00425
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00425
old locus tag: J164_00098
old locus tag: J164_RS00430
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007966096.1
GO function: GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zeta toxin family protein
translation: MDEKRFQLSTRKHTAAYEKIERHHFKDTAPADQPQAIILGGQPGAGKSGLLEASKQGFADRNVVTINGDELRYYHPQYRDIQKADERRFAELTDPHARPWTKQLFDRTIETRRNVVFEGTMREAGPITETMRRLKEAGYYVVARVIAANERDSMAGIHRRYEEQKAAKGFGRWSNVQAHDDAYKGMPATLEYIEHNKLADRVQVYDRKGNVLYDNELQGNEWKRQPAAKTAIEAERERPPTPEERRQQEAEWATILAMMTARRADEREIERVRDVARQYGGQQYPEHKPAEYERQDYGRQQPELRAPETGKTYQGPIVSADDKHVIQSVREAGRELHIQHERLVLNSDRRELLNAGTNVEIRYPYNRVGIVKEWGAKEIQGPASKGIEPKDFGKR
SIO_010081: AMD14_RS00425
subclass of: SO_0000673
so part of: AMD14_RS00425
location: complement(48946..50133)
location: region:48946-50133:-1
so has part: feature:48946-50133:-1:exon

WP_011053001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48946-50133:-1:exon

AMD14_RS00430
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00430
old locus tag: J164_00099
old locus tag: J164_RS00435
so part of: sequence
location: complement(50140..50403)
location: region:50140-50403:-1
so has part: feature:50140-50403:-1:exon
subclass of: SO_0000010

66909208
type: Gene
SIO_000068: ncbigene

position:50140:-1
position: 50140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50403:-1
position: 50403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50140-50403:-1:exon

AMD14_RS00430
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00430
old locus tag: J164_00099
old locus tag: J164_RS00435
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005917846.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNTPLSPIAKTARLEAATETLAEYIGYLNSEIDAEQDKAEPNAGRIEALEHELEIVVDERRAITPDNLSLINRALYVYAPLLKPMHG
SIO_010081: AMD14_RS00430
subclass of: SO_0000673
so part of: AMD14_RS00430
location: complement(50140..50403)
location: region:50140-50403:-1
so has part: feature:50140-50403:-1:exon

WP_005917846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50140-50403:-1:exon

AMD14_RS00435
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00435
old locus tag: J164_00100
old locus tag: J164_RS00440
so part of: sequence
location: complement(50428..50829)
location: region:50428-50829:-1
so has part: feature:50428-50829:-1:exon
subclass of: SO_0000010

66909209
type: Gene
SIO_000068: ncbigene

position:50428:-1
position: 50428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50829:-1
position: 50829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50428-50829:-1:exon

AMD14_RS00435
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00435
old locus tag: J164_00100
old locus tag: J164_RS00440
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053002.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKRYMLDTNTVSHLVKSHPAVSRRVIEVPMTALCMSAITGGELMFGLAKVPDAKRLQQAVMELLRRVDVLPWDGAVMERYGSVRADLEKQGKALGSLDMLIAAHALETDSVLVTNDAAFSRVVGLTVEDWTRS
SIO_010081: AMD14_RS00435
subclass of: SO_0000673
so part of: AMD14_RS00435
location: complement(50428..50829)
location: region:50428-50829:-1
so has part: feature:50428-50829:-1:exon

WP_011053002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50428-50829:-1:exon

AMD14_RS00440
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00440
old locus tag: J164_00101
old locus tag: J164_RS00445
so part of: sequence
location: complement(50826..51086)
location: region:50826-51086:-1
so has part: feature:50826-51086:-1:exon
subclass of: SO_0000010

66909210
type: Gene
SIO_000068: ncbigene

position:50826:-1
position: 50826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51086:-1
position: 51086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50826-51086:-1:exon

AMD14_RS00440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00440
old locus tag: J164_00101
old locus tag: J164_RS00445
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011053003.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MSQVAKLFINGRSQAVRLPAAYRFTEKEVFIRQDPETGDVILSRKPATWEDFFIVLKSADVPANFLDAAERNQGTQDRDPFAGWRE
SIO_010081: AMD14_RS00440
subclass of: SO_0000673
so part of: AMD14_RS00440
location: complement(50826..51086)
location: region:50826-51086:-1
so has part: feature:50826-51086:-1:exon

WP_011053003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50826-51086:-1:exon

AMD14_RS00445
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00445
old locus tag: J164_00102
old locus tag: J164_RS00450
so part of: sequence
location: 51277..51849
location: region:51277-51849:1
so has part: feature:51277-51849:1:exon
subclass of: SO_0000010

66909211
type: Gene
SIO_000068: ncbigene

position:51277:1
position: 51277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51849:1
position: 51849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51277-51849:1:exon

AMD14_RS00445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00445
old locus tag: J164_00102
old locus tag: J164_RS00450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017160511.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MALIGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRNGDVLAVWRLDRLGRSMPHLIETIGALEARGVGFRSLTEAIDTTTPGGRLIFHVFGALGQFERDLIRERTKAGLSAAAARGRKGGRKPVITADKLQQARKHIANGINVREAATRLKVSKTALYAALQSTSAGDLQK
SIO_010081: AMD14_RS00445
subclass of: SO_0000673
so part of: AMD14_RS00445
location: 51277..51849
location: region:51277-51849:1
so has part: feature:51277-51849:1:exon

WP_011053004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:51277-51849:1:exon

AMD14_RS00450
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00450
old locus tag: J164_00104
old locus tag: J164_RS00455
pseudo: true
so part of: sequence
location: complement(51880..>52468)
location: region:51880-52468:-1
so has part: feature:51880-52468:-1:exon
subclass of: SO_0000010

66909212
type: Gene
SIO_000068: ncbigene

position:51880:-1
position: 51880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52468:-1
position: 52468
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51880-52468:-1:exon

AMD14_RS00450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00450
old locus tag: J164_00104
old locus tag: J164_RS00455
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3-like element ISXac3 family transposase
SIO_010081: AMD14_RS00450
subclass of: SO_0000673
so part of: AMD14_RS00450
location: complement(51880..>52468)
location: region:51880-52468:-1
so has part: feature:51880-52468:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51880-52468:-1:exon

AMD14_RS00455
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: avrBs3
locus tag: AMD14_RS00455
old locus tag: J164_00105
old locus tag: J164_RS00460
so part of: sequence
location: 54022..57513
location: region:54022-57513:1
so has part: feature:54022-57513:1:exon
subclass of: SO_0000010

66909213
type: Gene
SIO_000068: ncbigene

position:54022:1
position: 54022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57513:1
position: 57513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54022-57513:1:exon

AMD14_RS00455
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: avrBs3
locus tag: AMD14_RS00455
old locus tag: J164_00105
old locus tag: J164_RS00460
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488475.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector avirulence protein AvrBs3
translation: MDPIRSRTPSPARELLPGPQPDGVQPTADRGVSPPAGGPLDGLPARRTMSRTRLPSPPAPSPAFSAGSFSDLLRQFDPSLFNTSLFDSLPPFGAHHTEAATGEWDEVQSGLRAADAPPPTMRVAVTAARPPRAKPAPRRRAAQPSDASPAAQVDLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPAQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTLDQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNSGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIACNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGRPALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKGLPHAPALIKRTNRRIPERTSHRVADHAQVVRVLGFFQCHSHPAQAFDDAMTQFGMSRHGLLQLFRRVGVTELEARSGTLPPASQRWDRILQASGMKRAKPSPTSTQTPDQASLHAFADSLERDLDAPSPTHEGDQRRASSRKRSRSDRAVTGPSAQQSFEVRVPEQRDALHLPLSWRVKRPRTSIGGGLPDPGTPTAADLAASSTVMREQDEDPFAGAADDFPAFNEEELAWLMELLPQ
SIO_010081: AMD14_RS00455
subclass of: SO_0000673
so part of: AMD14_RS00455
location: 54022..57513
location: region:54022-57513:1
so has part: feature:54022-57513:1:exon

WP_011053008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54022-57513:1:exon

AMD14_RS22490
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22490
pseudo: true
so part of: sequence
location: complement(<57627..>57758)
location: region:57627-57758:-1
so has part: feature:57627-57758:-1:exon
subclass of: SO_0000010

66913359
type: Gene
SIO_000068: ncbigene

position:57627:-1
position: 57627
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:57758:-1
position: 57758
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57627-57758:-1:exon

AMD14_RS22490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22490
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076612215.1
note: incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AMD14_RS22490
subclass of: SO_0000673
so part of: AMD14_RS22490
location: complement(<57627..>57758)
location: region:57627-57758:-1
so has part: feature:57627-57758:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57627-57758:-1:exon

AMD14_RS22495
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22495
so part of: sequence
location: complement(57803..58270)
location: region:57803-58270:-1
so has part: feature:57803-58270:-1:exon
subclass of: SO_0000010

66913360
type: Gene
SIO_000068: ncbigene

position:57803:-1
position: 57803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58270:-1
position: 58270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57803-58270:-1:exon

AMD14_RS22495
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22495
inference: COORDINATES: protein motif:HMM:NF015642.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: UPF0149 family protein
translation: MRHWNTIASELFRTLEKDDVYLPVLLEDADGAVHGNDWARGFMRGIQLRPNSWQELIGSEEFGGPMLPIMILTHEHDPDPAMRPPEIAPDKRDELLQSLIAGLTHIYRYFASHRQLATQGSLRRQGPKIGRNDQCPCGSGRKYKHCCATSAPTFH
SIO_010081: AMD14_RS22495
subclass of: SO_0000673
so part of: AMD14_RS22495
location: complement(57803..58270)
location: region:57803-58270:-1
so has part: feature:57803-58270:-1:exon

WP_075669037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57803-58270:-1:exon

AMD14_RS00460
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00460
old locus tag: J164_00106
old locus tag: J164_RS00465
so part of: sequence
location: complement(58164..61241)
location: region:58164-61241:-1
so has part: feature:58164-61241:-1:exon
subclass of: SO_0000010

66909214
type: Gene
SIO_000068: ncbigene

position:58164:-1
position: 58164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61241:-1
position: 61241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58164-61241:-1:exon

AMD14_RS00460
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00460
old locus tag: J164_00106
old locus tag: J164_RS00465
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345576.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element ISXc4 family transposase
translation: MPVSFLSTTQRERYGRYPDTLSSEELARYFHLDDDDREWIATKRRDSSRLGYALQLTTARFLGTFLEDPTAVPSPVLHTLSSQLGIADPSDCVIDYRTTRQRWQHTSEIRTRYGYREFTGTGVQFRLGRWLCALCWTGTDRPSALFDYANGWLVGHKVLLPGVTLLERFIAEIRSRMESRLWRLLVHGVTPEQRQRLDDLLKLVEGSRQSWLDRLRKGPVRVSAPALVAALLRIETVRGLGIKLPGTHVPPSRIAALARFASTAKVSAVARLPEVRRIATLVAFVHCLEASAQDDAIDVLDLLLRELFTKAEKEDRKVRQRSLKDLDRAASTLAEACRMLLDPALPDGELRERVYAAIGHDELAQALNEVRGLVRPPNDVFYTELEARKATVSRFLPALLRVIRFDANPAAQPLAQALQWLHEKPDHDPPTAIVGKAWQRHVVQDDGRINATAYSFCALDKLRSAIRRRDVFISPSWRYADPRAGLLAGAEWEASRPIVCRSLSLSAQPEATLSELTRELDETYRRVAARLPQNDAVRFENVGDKTELVLSPLEALEEPPSLIALRNEIKARMPRVDLPEILLEVAGRTGCMEAFTHLTERTARAADLTTSLCAVLMAEACNTGPEPLVRPDTPALKRDRLMWVDQNYVRDDTLTACNAVLVAAQSRIALARTWGGGDVASADGMRFVVPVRTIHAGPNPKYFNRGRGVTWYNLLSDQRTGLNAITVPGTLRDSLILLAVVLEQQTELQPTQIMTDTGAYSDLVFGLFRLSNYRFCPRLADVGGTRFWRVDPDADYGDLNALARQRVNLDRITPHWDDVLRLVGSLKLGLVPAMGIMRTLQVDERPTSLAQAIAEIGRIDKTIHTLNFIDDEARRRATLLQLNLGEGRHSLAREVFHGKRGELFQRYREGQEDQLSALGLVVNMIVLWNTLYMDAVLTQLRSEGYPVKPEDEARLSPFGHEHINMLGRYSFSVPEAVARGEPSRRNSWLGHAALEHDCIRIVPHSGERRCLPSRATRRCGWGRTR
SIO_010081: AMD14_RS00460
subclass of: SO_0000673
so part of: AMD14_RS00460
location: complement(58164..61241)
location: region:58164-61241:-1
so has part: feature:58164-61241:-1:exon

WP_234705865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:58164-61241:-1:exon

AMD14_RS00465
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00465
old locus tag: J164_00107
old locus tag: J164_RS00470
so part of: sequence
location: complement(61246..61665)
location: region:61246-61665:-1
so has part: feature:61246-61665:-1:exon
subclass of: SO_0000010

66909215
type: Gene
SIO_000068: ncbigene

position:61246:-1
position: 61246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61665:-1
position: 61665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61246-61665:-1:exon

AMD14_RS00465
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00465
old locus tag: J164_00107
old locus tag: J164_RS00470
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003491210.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative toxin-antitoxin system toxin component, PIN family
translation: MRVVLDTNVLLAALISSHSPPDIIYRGWLAARFELVTGTAQLDELRRVSRYPKIKAILPAHRVGTMINNMQRAVVLHVLPPLPDRIEVNDPNDAFLLAMALASEADYLVTGDRRAGLLQRGSIGRTRIVTPVTFCAEAL
SIO_010081: AMD14_RS00465
subclass of: SO_0000673
so part of: AMD14_RS00465
location: complement(61246..61665)
location: region:61246-61665:-1
so has part: feature:61246-61665:-1:exon

WP_003491210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61246-61665:-1:exon

AMD14_RS00470
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00470
old locus tag: J164_00108
old locus tag: J164_RS00475
so part of: sequence
location: complement(61665..61904)
location: region:61665-61904:-1
so has part: feature:61665-61904:-1:exon
subclass of: SO_0000010

66909216
type: Gene
SIO_000068: ncbigene

position:61904:-1
position: 61904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61665-61904:-1:exon

AMD14_RS00470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00470
old locus tag: J164_00108
old locus tag: J164_RS00475
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013105051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MNTVRWNIAVSPDVDQSVRMFIAAQGGGRKGDLSRFIEDAVRAYLFERAVEQAKAATVGMGETELNDLIDEAVQWAREH
SIO_010081: AMD14_RS00470
subclass of: SO_0000673
so part of: AMD14_RS00470
location: complement(61665..61904)
location: region:61665-61904:-1
so has part: feature:61665-61904:-1:exon

WP_003491212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:61665-61904:-1:exon

AMD14_RS00475
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00475
old locus tag: J164_00109
old locus tag: J164_RS00480
so part of: sequence
location: 62118..63041
location: region:62118-63041:1
so has part: feature:62118-63041:1:exon
subclass of: SO_0000010

66909217
type: Gene
SIO_000068: ncbigene

position:62118:1
position: 62118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63041:1
position: 63041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62118-63041:1:exon

AMD14_RS00475
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00475
old locus tag: J164_00109
old locus tag: J164_RS00480
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKIGYARVSTREQNPALQVDSLKAAGCERIYQDVASGAKTARPALDELLGQLRGGDVLVIWKLDRMGRSLKHLVELVGSLMERKVGLLSLNDPIDTTSAQGRFVFNLFATLAEFERELIRERTQAGLTAARARGRVGGRPKGLSPQAEATALAAETLYRERKLSVAAIAQKLHLSKSTLYSYLRHRGVEIGPYKQSAQSPINVSVVESGNADQPKVATILLTLRIENNSKFVRGKKRSIEHVEFFDLAQYDATRRPNGEYELKVPYDTDEELDEAVNDLLTDIACGADDRHCFSESHARMEGTDRHW
SIO_010081: AMD14_RS00475
subclass of: SO_0000673
so part of: AMD14_RS00475
location: 62118..63041
location: region:62118-63041:1
so has part: feature:62118-63041:1:exon

WP_003491216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62118-63041:1:exon

AMD14_RS00480
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00480
old locus tag: J164_RS00485
pseudo: true
so part of: sequence
location: <63085..63267
location: region:63085-63267:1
so has part: feature:63085-63267:1:exon
subclass of: SO_0000010

66909218
type: Gene
SIO_000068: ncbigene

position:63085:1
position: 63085
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:63267:1
position: 63267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63085-63267:1:exon

AMD14_RS00480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00480
old locus tag: J164_RS00485
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918483.1
GO function: GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
GO process: GO:0006310 - DNA recombination [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
SIO_010081: AMD14_RS00480
subclass of: SO_0000673
so part of: AMD14_RS00480
location: <63085..63267
location: region:63085-63267:1
so has part: feature:63085-63267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63085-63267:1:exon