Xanthomonas citri pv. citri strain MN12 plasmid pXAC33, complete sequence.
type: Entry
definition: Xanthomonas citri pv. citri strain MN12 plasmid pXAC33, complete sequence.
sequence version: NZ_CP008996.1
sequence date: 2023-02-11
sequence: sequence
division: CON
label: NZ_CP008996.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN02911843
keyword: RefSeq
source: Xanthomonas citri pv. citri (Xanthomonas citri subsp. citri)
organism: Xanthomonas citri pv. citri
taxonomy: Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.
reference: 1
references: 25689023
reference: 2
reference: 3
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP008996.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: Bio v. 6.0\nReference-guided Assembly :: AE008924.1\nSequencing Technology :: Illumina CLC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/11/2023 11:05:40\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,507\nCDSs (total) :: 4,408\nGenes (coding) :: 4,241\nCDSs (with protein) :: 4,241\nGenes (RNA) :: 99\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 53\nncRNAs :: 40\nPseudo Genes (total) :: 167\nCDSs (without protein) :: 167\nPseudo Genes (ambiguous residues) :: 0 of 167\nPseudo Genes (frameshifted) :: 97 of 167\nPseudo Genes (incomplete) :: 71 of 167\nPseudo Genes (internal stop) :: 29 of 167\nPseudo Genes (multiple problems) :: 27 of 167\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 33703
topology: circular
so has quality: SO_0000988
location: 1..33703
location: region:1-33703:1
RO_0002162: 611301

NZ_CP008996
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN02911843
type: BioSample
SIO_000068: biosample

1
title: Positive selection is the main driving force for evolution of citrus canker-causing Xanthomonas
author: Zhang, Y.
author: Jalan, N.
author: Zhou, X.
author: Goss, E.
author: Jones, J.B.
author: Setubal, J.C.
author: Deng, X.
author: Wang, N.
journal: ISME J
volume: 9
issue: 10
pages: 2128-2138
year: 2015
pubmed: 25689023

25689023
type: PubMed
SIO_000068: pubmed

2
title: comparative genomic analysis of citrus canker causing Xanthomonas
author: Zhang, Y.
author: Jalan, N.
author: Wang, N.
journal: Unpublished

3
title: Direct Submission
author: Zhang, Y.
author: Jalan, N.
author: Wang, N.
journal: Submitted (24-JUL-2014) University of Florida, Citrus Research and Education Center, 700 Experiment Station Road, Lake Alfred, FL 33850, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33703:1
position: 33703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-33703:1:source
so part of: sequence
organism: Xanthomonas citri pv. citri
mol type: genomic DNA
strain: MN12
isolation source: citrus infected tissue
host: citrus spp.
sub species: citri
plasmid: pXAC33
country: USA: Florida
collection date: 1997
pathovar: citri

611301
type: Taxonomy
SIO_000068: taxonomy

AMD14_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00005
old locus tag: J164_00001
old locus tag: J164_RS00005
so part of: sequence
location: complement(457..1278)
location: region:457-1278:-1
so has part: feature:457-1278:-1:exon
subclass of: SO_0000010

66909131
type: Gene
SIO_000068: ncbigene

position:457:-1
position: 457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278:-1
position: 1278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457-1278:-1:exon

AMD14_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00005
old locus tag: J164_00001
old locus tag: J164_RS00005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017113814.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPAVDPGSHTPGPEPTATSGRPHKRVHWRQPKPPSGKKRRPAVLDATREALVRSLEQRRGSLWMRISRNVIVAGYALDKALTRVRALRKDGAESLLAMSVALLYLADVRTGFVGKPRQGGGPWQRYTLRDLAQLAYGAQTGAELERAKRSIDMMVSLGWAFPTKQVRRHTKDAEGRDGWCSEPGVRRLNFQRLCDMAGTSWLLKRDRKHADQARGTGVASFAQAHARRQSPQDAGTTPRTGAARPAAHRATGDPPGGAQSAVQHISDILALFK
SIO_010081: AMD14_RS00005
subclass of: SO_0000673
so part of: AMD14_RS00005
location: complement(457..1278)
location: region:457-1278:-1
so has part: feature:457-1278:-1:exon

WP_011052929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:457-1278:-1:exon

AMD14_RS22375
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22375
old locus tag: J164_00003
so part of: sequence
location: 1918..2082
location: region:1918-2082:1
so has part: feature:1918-2082:1:exon
subclass of: SO_0000010

66913347
type: Gene
SIO_000068: ncbigene

position:1918:1
position: 1918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2082:1
position: 2082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1918-2082:1:exon

AMD14_RS22375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22375
old locus tag: J164_00003
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNRFKRDTGDVKREKPKPKRRKLNLTVALLPSLFFNDEEAMLTLTKKEGNPPAH
SIO_010081: AMD14_RS22375
subclass of: SO_0000673
so part of: AMD14_RS22375
location: 1918..2082
location: region:1918-2082:1
so has part: feature:1918-2082:1:exon

WP_155400514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1918-2082:1:exon

AMD14_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00015
old locus tag: J164_00005
old locus tag: J164_RS00015
so part of: sequence
location: 2131..3218
location: region:2131-3218:1
so has part: feature:2131-3218:1:exon
subclass of: SO_0000010

66909132
type: Gene
SIO_000068: ncbigene

position:2131:1
position: 2131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3218:1
position: 3218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2131-3218:1:exon

AMD14_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00015
old locus tag: J164_00005
old locus tag: J164_RS00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611493.1
ribosomal slippage: true
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS3-like element ISXac2 family transposase
translation: MKKSRFTDSQIIAVLKQAQAGAPVPELCREHGISSATFYKWRSKFGGMDVSMVARMKELEEENRRLKKMYAEAQLSTDLLKEALGKKMVRPSQRREMAQSAVTSGRTNIRHACQTFAVSQTCFRYQAKASEQNARIADWLVRLTSAHRDWGFGLCYLYLRNVKGFGWNHKRVYRIYRELELNLRIKPKKRLVRERPEPLAVPEAINQVWSMDFMHDQLADGRSFRLFNVLDDFNREGLGIEVDLSLPSARVIRSLEQIIEWRGKPAVIRCDNGPEYISGALLSWAQRLGIRVEHIQPGKPQQNAYVERYNRTIRYAWLARTLFDTIDQVQDKATRWLWTYNHERPNMALGGITPAMKLAMAA
SIO_010081: AMD14_RS00015
subclass of: SO_0000673
so part of: AMD14_RS00015
location: join(2131..2383,2383..3218)
location: region:2131-3218:1
so has part: feature:2131-2383:1:exon
so has part: feature:2383-3218:1:exon

WP_087943923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2131-2383:1:exon

position:2383:1
position: 2383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2383-3218:1:exon

AMD14_RS22380
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22380
old locus tag: J164_00006
so part of: sequence
location: complement(3184..3813)
location: region:3184-3813:-1
so has part: feature:3184-3813:-1:exon
subclass of: SO_0000010

66913348
type: Gene
SIO_000068: ncbigene

position:3184:-1
position: 3184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3813:-1
position: 3813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3184-3813:-1:exon

AMD14_RS22380
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22380
old locus tag: J164_00006
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052932.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MALIGYARVSTAEQDTALQTDALRKAGCERVFEDTASGAKADRPGLADALAYLRNGDVLAVWRLDRLGRSMPHLIETIGALEARGVGFRSLTEAIDTTTPGGRLIFHVFGALGQFERDLIRERTKAGLSAAAARGRKGGRKPVITADKLQQARKHIANGINVREAATRLKVSKTALYAALQSTSAGVIPPLLAVARSGAKRPSPTSWQA
SIO_010081: AMD14_RS22380
subclass of: SO_0000673
so part of: AMD14_RS22380
location: complement(3184..3813)
location: region:3184-3813:-1
so has part: feature:3184-3813:-1:exon

WP_011052932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3184-3813:-1:exon

AMD14_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00025
old locus tag: J164_00007
old locus tag: J164_RS00025
so part of: sequence
location: 3993..4244
location: region:3993-4244:1
so has part: feature:3993-4244:1:exon
subclass of: SO_0000010

66909133
type: Gene
SIO_000068: ncbigene

position:3993:1
position: 3993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4244:1
position: 4244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3993-4244:1:exon

AMD14_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00025
old locus tag: J164_00007
old locus tag: J164_RS00025
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019334760.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AbrB/MazE/SpoVT family DNA-binding domain-containing protein
translation: MTTLTVTARGQVTFRKDVLQHLGIRPGDKIELDLLPDGRGVLKAARPAGTIASFVGLLAGKTQKVATIEEINEAAAQGWAGKQ
SIO_010081: AMD14_RS00025
subclass of: SO_0000673
so part of: AMD14_RS00025
location: 3993..4244
location: region:3993-4244:1
so has part: feature:3993-4244:1:exon

WP_003108276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3993-4244:1:exon

AMD14_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00030
old locus tag: J164_00008
old locus tag: J164_RS00030
so part of: sequence
location: 4241..4636
location: region:4241-4636:1
so has part: feature:4241-4636:1:exon
subclass of: SO_0000010

66909134
type: Gene
SIO_000068: ncbigene

position:4241:1
position: 4241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4636:1
position: 4636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4241-4636:1:exon

AMD14_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00030
old locus tag: J164_00008
old locus tag: J164_RS00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172645.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MKVAVDTNVLVRAVVRDDPAQADVAAAVLTDAELIAVALPCLCEFVWVLMRVYGFQQSDAADAIRALLAAANVEVNRPAVEAGLLVLDAGGDFADGVIAYEGNWLGGETFVSFDKKAVTLLSVQGQSARLL
SIO_010081: AMD14_RS00030
subclass of: SO_0000673
so part of: AMD14_RS00030
location: 4241..4636
location: region:4241-4636:1
so has part: feature:4241-4636:1:exon

WP_015463818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4241-4636:1:exon

AMD14_RS25140
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS25140
pseudo: true
so part of: sequence
location: 4648..>4764
location: region:4648-4764:1
so has part: feature:4648-4764:1:exon
subclass of: SO_0000010

69984213
type: Gene
SIO_000068: ncbigene

position:4648:1
position: 4648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4764:1
position: 4764
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4648-4764:1:exon

AMD14_RS25140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS25140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003159187.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMD14_RS25140
subclass of: SO_0000673
so part of: AMD14_RS25140
location: 4648..>4764
location: region:4648-4764:1
so has part: feature:4648-4764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4648-4764:1:exon

AMD14_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00035
old locus tag: J164_00009
old locus tag: J164_RS00035
so part of: sequence
location: complement(4797..5174)
location: region:4797-5174:-1
so has part: feature:4797-5174:-1:exon
subclass of: SO_0000010

66909135
type: Gene
SIO_000068: ncbigene

position:4797:-1
position: 4797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5174:-1
position: 5174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4797-5174:-1:exon

AMD14_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00035
old locus tag: J164_00009
old locus tag: J164_RS00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004666662.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGDKTDKNTIAWLAQPEEHDYPAAQSYLNLLYDDAHCAKLVRELHAAPMSAFKAKDILRASGLSPLGMSNAHVERDLKKIQSGTALSPLLLVRQEGQRTVVADGYHRLCAVYSFDEDASIPCKIV
SIO_010081: AMD14_RS00035
subclass of: SO_0000673
so part of: AMD14_RS00035
location: complement(4797..5174)
location: region:4797-5174:-1
so has part: feature:4797-5174:-1:exon

WP_040260048.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4797-5174:-1:exon

AMD14_RS22385
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22385
pseudo: true
so part of: sequence
location: complement(5233..>5478)
location: region:5233-5478:-1
so has part: feature:5233-5478:-1:exon
subclass of: SO_0000010

66913349
type: Gene
SIO_000068: ncbigene

position:5233:-1
position: 5233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5478:-1
position: 5478
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5233-5478:-1:exon

AMD14_RS22385
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22385
inference: COORDINATES: similar to AA sequence:RefSeq:WP_076611952.1
note: internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: IS3 family transposase
SIO_010081: AMD14_RS22385
subclass of: SO_0000673
so part of: AMD14_RS22385
location: complement(5233..>5478)
location: region:5233-5478:-1
so has part: feature:5233-5478:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5233-5478:-1:exon

AMD14_RS22390
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22390
old locus tag: J164_00011
pseudo: true
so part of: sequence
location: <5618..5913
location: region:5618-5913:1
so has part: feature:5618-5913:1:exon
subclass of: SO_0000010

66913350
type: Gene
SIO_000068: ncbigene

position:5618:1
position: 5618
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:5913:1
position: 5913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5618-5913:1:exon

AMD14_RS22390
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22390
old locus tag: J164_00011
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003159187.1
note: frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: transposase
SIO_010081: AMD14_RS22390
subclass of: SO_0000673
so part of: AMD14_RS22390
location: <5618..5913
location: region:5618-5913:1
so has part: feature:5618-5913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5618-5913:1:exon

AMD14_RS24930
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS24930
old locus tag: J164_00012
pseudo: true
so part of: sequence
location: complement(6005..6178)
location: region:6005-6178:-1
so has part: feature:6005-6178:-1:exon
subclass of: SO_0000010

66913576
type: Gene
SIO_000068: ncbigene

position:6005:-1
position: 6005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6178:-1
position: 6178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6005-6178:-1:exon

AMD14_RS24930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS24930
old locus tag: J164_00012
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017166603.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: hypothetical protein
SIO_010081: AMD14_RS24930
subclass of: SO_0000673
so part of: AMD14_RS24930
location: complement(6005..6178)
location: region:6005-6178:-1
so has part: feature:6005-6178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6005-6178:-1:exon

AMD14_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00040
old locus tag: J164_00013
old locus tag: J164_RS00040
so part of: sequence
location: complement(6178..6573)
location: region:6178-6573:-1
so has part: feature:6178-6573:-1:exon
subclass of: SO_0000010

66909136
type: Gene
SIO_000068: ncbigene

position:6573:-1
position: 6573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6178-6573:-1:exon

AMD14_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00040
old locus tag: J164_00013
old locus tag: J164_RS00040
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007966864.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSSGKSIPVWYSEEDRRRVEEAAALAGYKHLSKYIRDKSLDRGSHRESGRDSMEAWADRQELVGRLAEIERSQKGAHALLAMLLFLVRKKATTGELNELVLACETVGVPADVLAVSLPELAALLTRFTEDS
SIO_010081: AMD14_RS00040
subclass of: SO_0000673
so part of: AMD14_RS00040
location: complement(6178..6573)
location: region:6178-6573:-1
so has part: feature:6178-6573:-1:exon

WP_011052973.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6178-6573:-1:exon

AMD14_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00045
old locus tag: J164_00014
old locus tag: J164_RS00045
so part of: sequence
location: 6921..7367
location: region:6921-7367:1
so has part: feature:6921-7367:1:exon
subclass of: SO_0000010

66909137
type: Gene
SIO_000068: ncbigene

position:6921:1
position: 6921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7367:1
position: 7367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6921-7367:1:exon

AMD14_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00045
old locus tag: J164_00014
old locus tag: J164_RS00045
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052937.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKSDLTQALTAIEPKTKAAKVREVMPVIEQRIAAGVRIADILKTLKDSGIDLTEATLKSYLYRYRKKHQAKTKGQQSASQTVGMPAPPQPGESESVSHETDSAETPPSRGPISMQELDRVMKPDPEEQAKDIARYERLAKEKWRKHK
SIO_010081: AMD14_RS00045
subclass of: SO_0000673
so part of: AMD14_RS00045
location: 6921..7367
location: region:6921-7367:1
so has part: feature:6921-7367:1:exon

WP_011052937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6921-7367:1:exon

AMD14_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: stbB
locus tag: AMD14_RS00050
old locus tag: J164_00015
old locus tag: J164_RS00050
pseudo: true
so part of: sequence
location: 7364..8073
location: region:7364-8073:1
so has part: feature:7364-8073:1:exon
subclass of: SO_0000010

66909138
type: Gene
SIO_000068: ncbigene

position:7364:1
position: 7364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8073:1
position: 8073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7364-8073:1:exon

AMD14_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: stbB
locus tag: AMD14_RS00050
old locus tag: J164_00015
old locus tag: J164_RS00050
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017172642.1
note: frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: StbB family protein
SIO_010081: AMD14_RS00050
subclass of: SO_0000673
so part of: AMD14_RS00050
location: 7364..8073
location: region:7364-8073:1
so has part: feature:7364-8073:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7364-8073:1:exon

AMD14_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00055
old locus tag: J164_00016
old locus tag: J164_RS00055
so part of: sequence
location: 8122..8475
location: region:8122-8475:1
so has part: feature:8122-8475:1:exon
subclass of: SO_0000010

66909139
type: Gene
SIO_000068: ncbigene

position:8122:1
position: 8122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8475:1
position: 8475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8122-8475:1:exon

AMD14_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00055
old locus tag: J164_00016
old locus tag: J164_RS00055
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017154897.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAELLQDADALVRRFEQADEALTGKIEKATTDAAGKAFLAAKLNFESVIDKNAEKLTEAGRHAAAQIGNQLNSGAAQVVAANAAFESKARRFVLLLAGFAFVAGVVGGFVGAKLAGM
SIO_010081: AMD14_RS00055
subclass of: SO_0000673
so part of: AMD14_RS00055
location: 8122..8475
location: region:8122-8475:1
so has part: feature:8122-8475:1:exon

WP_039700904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8122-8475:1:exon

AMD14_RS22395
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22395
old locus tag: J164_00017
so part of: sequence
location: complement(8870..9079)
location: region:8870-9079:-1
so has part: feature:8870-9079:-1:exon
subclass of: SO_0000010

66913351
type: Gene
SIO_000068: ncbigene

position:8870:-1
position: 8870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9079:-1
position: 9079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8870-9079:-1:exon

AMD14_RS22395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22395
old locus tag: J164_00017
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010368818.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKPDASHHDPRPEYLRSRIQRAGLSQRQAADRIGISERLLRYYLVAEKHPSYRAAPYPVQFALEKLAED
SIO_010081: AMD14_RS22395
subclass of: SO_0000673
so part of: AMD14_RS22395
location: complement(8870..9079)
location: region:8870-9079:-1
so has part: feature:8870-9079:-1:exon

WP_015462608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8870-9079:-1:exon

AMD14_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00060
old locus tag: J164_00018
old locus tag: J164_RS00065
so part of: sequence
location: complement(9076..9384)
location: region:9076-9384:-1
so has part: feature:9076-9384:-1:exon
subclass of: SO_0000010

66909140
type: Gene
SIO_000068: ncbigene

position:9076:-1
position: 9076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9384:-1
position: 9384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9076-9384:-1:exon

AMD14_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00060
old locus tag: J164_00018
old locus tag: J164_RS00065
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017115804.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MHTIELSKLVEQQLVLLQPERLEVIGLMRNGWEMALRVRPGLAPTCWLEKNEIGSGGESKSVDIETFNVLVDRGVFRVKNIGCRVNIYALSDAYCLADELSP
SIO_010081: AMD14_RS00060
subclass of: SO_0000673
so part of: AMD14_RS00060
location: complement(9076..9384)
location: region:9076-9384:-1
so has part: feature:9076-9384:-1:exon

WP_015462607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9076-9384:-1:exon

AMD14_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00065
old locus tag: J164_00019
old locus tag: J164_RS00070
so part of: sequence
location: 9840..10466
location: region:9840-10466:1
so has part: feature:9840-10466:1:exon
subclass of: SO_0000010

66909141
type: Gene
SIO_000068: ncbigene

position:9840:1
position: 9840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10466:1
position: 10466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9840-10466:1:exon

AMD14_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00065
old locus tag: J164_00019
old locus tag: J164_RS00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918230.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family protein
translation: MIFACVNTKGGVGKTTTAVHLAVMLARQGKTLLIDGDPQASAASWAAWRRETQYDPSPTTTCLAGKAILAEGKQLATGFEHVVVDAGGRDSVGLRSALLLAQSAVIPVGASNLDAAAMTDLLEVVELARDYNPELDVRVLLTRVDPRTKDAVEMLEFLAEQKLTVLPTKVCERVAFRRAIGEGATVQELGRDQAAIAEMEAFFKEVMA
SIO_010081: AMD14_RS00065
subclass of: SO_0000673
so part of: AMD14_RS00065
location: 9840..10466
location: region:9840-10466:1
so has part: feature:9840-10466:1:exon

WP_005931726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9840-10466:1:exon

AMD14_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00070
old locus tag: J164_00020
old locus tag: J164_RS00075
so part of: sequence
location: 10463..10786
location: region:10463-10786:1
so has part: feature:10463-10786:1:exon
subclass of: SO_0000010

66909142
type: Gene
SIO_000068: ncbigene

position:10463:1
position: 10463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10786:1
position: 10786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10463-10786:1:exon

AMD14_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00070
old locus tag: J164_00020
old locus tag: J164_RS00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918229.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSMKGKPNTAQFKPPKDPTAFLEGGEADKAEKPLVAPAAVTTTPAATPPAAEETQRYGRARVQKIFNFPEELADHLRREALKRSEEKGGRVTEKDIVIEALEAFLKG
SIO_010081: AMD14_RS00070
subclass of: SO_0000673
so part of: AMD14_RS00070
location: 10463..10786
location: region:10463-10786:1
so has part: feature:10463-10786:1:exon

WP_005918229.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10463-10786:1:exon

AMD14_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00075
old locus tag: J164_00021
old locus tag: J164_RS00080
so part of: sequence
location: 10931..11245
location: region:10931-11245:1
so has part: feature:10931-11245:1:exon
subclass of: SO_0000010

66909143
type: Gene
SIO_000068: ncbigene

position:10931:1
position: 10931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11245:1
position: 11245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10931-11245:1:exon

AMD14_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00075
old locus tag: J164_00021
old locus tag: J164_RS00080
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005918227.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParC family partition-associated protein
translation: MMLTTTASVVAPKVLKELIAAGSVSAARVEPGDKGLLILVRAGMNERVLGAARGGLRYFQSLDGAASVLQGYGIMKFDVNTEHWVPKTMVRGYKQAPASVDADE
SIO_010081: AMD14_RS00075
subclass of: SO_0000673
so part of: AMD14_RS00075
location: 10931..11245
location: region:10931-11245:1
so has part: feature:10931-11245:1:exon

WP_005918227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10931-11245:1:exon

AMD14_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00080
old locus tag: J164_00022
old locus tag: J164_RS00085
so part of: sequence
location: 11493..12713
location: region:11493-12713:1
so has part: feature:11493-12713:1:exon
subclass of: SO_0000010

66909144
type: Gene
SIO_000068: ncbigene

position:11493:1
position: 11493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12713:1
position: 12713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11493-12713:1:exon

AMD14_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00080
old locus tag: J164_00022
old locus tag: J164_RS00085
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052942.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MAGTTAQKLDNQTADRFFQSGTALNRVLTEAPYLPRCSDDKTATRVRPREYAIRYPYMQVNRPGFVSWLIFDLDHTKAMIWEDAGLPAPNLIVRNRQSGHSHLYYAIPPVCTTEAARSKPIAYMKAVYEAFAARLDADTDFHSGPVAKTPGHPWWLTHELHAHIYELGELADYVDLAVSSPWGRGPQLDEVSHSRHCILFEHLRHYAYSIVNRERERGSFATFTRLLEAYAHNRNSFQKLGFMDNLAQSSLKATVKSVARWTWDRYTGSGRCHRGVMQLDKDLPLIERQRLAAARTHDVRHKATESKVRAACRLLQQKGEALTQAAIGRVAGLTRQTVATYKHVLEEVLRPIAMAILGGASGKVEDVKHGANQVSAPSQGAGVPGAASVSLELSSAGPGVVPVLDG
SIO_010081: AMD14_RS00080
subclass of: SO_0000673
so part of: AMD14_RS00080
location: 11493..12713
location: region:11493-12713:1
so has part: feature:11493-12713:1:exon

WP_011052942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11493-12713:1:exon

AMD14_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: avrBs3
locus tag: AMD14_RS00085
old locus tag: J164_00023
old locus tag: J164_RS00090
so part of: sequence
location: complement(13079..16459)
location: region:13079-16459:-1
so has part: feature:13079-16459:-1:exon
subclass of: SO_0000010

66909145
type: Gene
SIO_000068: ncbigene

position:13079:-1
position: 13079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16459:-1
position: 16459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13079-16459:-1:exon

AMD14_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: avrBs3
locus tag: AMD14_RS00085
old locus tag: J164_00023
old locus tag: J164_RS00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488475.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector avirulence protein AvrBs3
translation: MDPIRSRTPSPARELLPGPQPDGVQPTADRGVSPPAGGPLDGLPARRTMSRTRLPSPPAPSPAFSAGSFSDLLRQFDPSLFNTSLFDSLPPFGAHHTEAATGEWDEVQSGLRAADAPPPTMRVAVTAARPPRAKPAPRRRAAQPSDASPAAQVDLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVYAWRNALTGAPLNLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGKQALETVQRLLPVLCQAHGLTPAQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPAQVVAIASNGGKQALETVQRLLPVLCQAHGLTPAQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGKQALETVQRLLPVLCQAHGLTPAQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGKQALETVQRLLPVLCQAHGLTPAQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGRPALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKGLPHAPALIKRTNRRIPERTSHRVADHAQVVRVLGFFQCHSHPAQAFDDAMTQFGMSRHGLLQLFRRVGVTELEARSGTLPPASQRWDRILQASGMKRAKPSPTSTQTPDQASLHAFADSLERDLDAPSPTHEGDQRRASSRKRSRSDRAVTGPSAQQSFEVRVPEQRDALHLPLSWRVKRPRTSIGGGLPDPGTPTAADLAASSTVMREQDEDPFAGAADDFPAFNEEELAWLMELLPQ
SIO_010081: AMD14_RS00085
subclass of: SO_0000673
so part of: AMD14_RS00085
location: complement(13079..16459)
location: region:13079-16459:-1
so has part: feature:13079-16459:-1:exon

WP_011052943.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13079-16459:-1:exon

AMD14_RS24440
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS24440
old locus tag: J164_00024
so part of: sequence
location: complement(16705..16926)
location: region:16705-16926:-1
so has part: feature:16705-16926:-1:exon
subclass of: SO_0000010

66913496
type: Gene
SIO_000068: ncbigene

position:16705:-1
position: 16705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16926:-1
position: 16926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16705-16926:-1:exon

AMD14_RS24440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS24440
old locus tag: J164_00024
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052944.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLLGHCTDVLADTGFSDNLKVIYSNGIHLSVEFASERRVDNQLNLEPSVFRHGNVLADHRNAAELTLFVKPI
SIO_010081: AMD14_RS24440
subclass of: SO_0000673
so part of: AMD14_RS24440
location: complement(16705..16926)
location: region:16705-16926:-1
so has part: feature:16705-16926:-1:exon

WP_011052944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16705-16926:-1:exon

AMD14_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00100
old locus tag: J164_00025
old locus tag: J164_RS00105
so part of: sequence
location: complement(17216..17752)
location: region:17216-17752:-1
so has part: feature:17216-17752:-1:exon
subclass of: SO_0000010

66909146
type: Gene
SIO_000068: ncbigene

position:17216:-1
position: 17216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17752:-1
position: 17752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17216-17752:-1:exon

AMD14_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00100
old locus tag: J164_00025
old locus tag: J164_RS00105
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015463823.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid pRiA4b ORF-3 family protein
translation: MTIENPASVWRLRVELLDVAPPVWRRFDTYADVKLSQLHYFIQGVMGWELMHLFSYQDGRGYGDQISSELRLCDVCRVGDALTYTYDFGDNWQHRVTVEKTMARPKGTYPRVIAGKYACPPEDCGGPWGYGDMLRVLAGHRNARRRELVEWLGGPFNPKTFDMEEARERLAEYVVASG
SIO_010081: AMD14_RS00100
subclass of: SO_0000673
so part of: AMD14_RS00100
location: complement(17216..17752)
location: region:17216-17752:-1
so has part: feature:17216-17752:-1:exon

WP_015463823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17216-17752:-1:exon

AMD14_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00105
old locus tag: J164_00026
old locus tag: J164_RS00110
so part of: sequence
location: complement(17742..17954)
location: region:17742-17954:-1
so has part: feature:17742-17954:-1:exon
subclass of: SO_0000010

66909147
type: Gene
SIO_000068: ncbigene

position:17742:-1
position: 17742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17954:-1
position: 17954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17742-17954:-1:exon

AMD14_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00105
old locus tag: J164_00026
old locus tag: J164_RS00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052947.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRRADFFCEDFQEFGDVLADMAQEAEALAFMTPANGLFIGYRDRLFAIAREVSTINGGLRAAIAIIKHDD
SIO_010081: AMD14_RS00105
subclass of: SO_0000673
so part of: AMD14_RS00105
location: complement(17742..17954)
location: region:17742-17954:-1
so has part: feature:17742-17954:-1:exon

WP_011052947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17742-17954:-1:exon

AMD14_RS24445
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS24445
so part of: sequence
location: complement(17951..18202)
location: region:17951-18202:-1
so has part: feature:17951-18202:-1:exon
subclass of: SO_0000010

66913497
type: Gene
SIO_000068: ncbigene

position:17951:-1
position: 17951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18202:-1
position: 18202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17951-18202:-1:exon

AMD14_RS24445
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS24445
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRKSGHSNRSARRRGGDRHVLLGSRSPANEHERLQVLIGVIIDSHPDWPLSEVGNTALLLSGATIEKVAAVLRDYVSDGGEP
SIO_010081: AMD14_RS24445
subclass of: SO_0000673
so part of: AMD14_RS24445
location: complement(17951..18202)
location: region:17951-18202:-1
so has part: feature:17951-18202:-1:exon

WP_125459571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:17951-18202:-1:exon

AMD14_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00110
old locus tag: J164_00027
old locus tag: J164_RS00115
so part of: sequence
location: complement(18225..18557)
location: region:18225-18557:-1
so has part: feature:18225-18557:-1:exon
subclass of: SO_0000010

66909148
type: Gene
SIO_000068: ncbigene

position:18225:-1
position: 18225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18557:-1
position: 18557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18225-18557:-1:exon

AMD14_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00110
old locus tag: J164_00027
old locus tag: J164_RS00115
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009109555.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system PemK/MazF family toxin
translation: MDRGDVYLVSLDPTSGHEQQGTRPVLIVSPSAFNRLTKTPVVLPITSGGNFARTAGFTVSLMGAGTNTTGVVRCDQPRALDLASRRARKLETVPSPIMDEVLAKLSAILE
SIO_010081: AMD14_RS00110
subclass of: SO_0000673
so part of: AMD14_RS00110
location: complement(18225..18557)
location: region:18225-18557:-1
so has part: feature:18225-18557:-1:exon

WP_015463824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18225-18557:-1:exon

AMD14_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00115
old locus tag: J164_00028
old locus tag: J164_RS00120
so part of: sequence
location: complement(18557..18814)
location: region:18557-18814:-1
so has part: feature:18557-18814:-1:exon
subclass of: SO_0000010

66909149
type: Gene
SIO_000068: ncbigene

position:18814:-1
position: 18814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18557-18814:-1:exon

AMD14_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00115
old locus tag: J164_00028
old locus tag: J164_RS00120
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052949.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: antitoxin
translation: MHTTNLRKVGGSIMLAVPPAILDMLRLRAGATVGLAVDHGRLVIEPTLRPYYSLDELLAQCDASAELSTEDREWLDAKPVGSELL
SIO_010081: AMD14_RS00115
subclass of: SO_0000673
so part of: AMD14_RS00115
location: complement(18557..18814)
location: region:18557-18814:-1
so has part: feature:18557-18814:-1:exon

WP_011052949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18557-18814:-1:exon

AMD14_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00120
old locus tag: J164_00029
old locus tag: J164_RS00125
so part of: sequence
location: 19020..19622
location: region:19020-19622:1
so has part: feature:19020-19622:1:exon
subclass of: SO_0000010

66909150
type: Gene
SIO_000068: ncbigene

position:19020:1
position: 19020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19622:1
position: 19622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19020-19622:1:exon

AMD14_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00120
old locus tag: J164_00029
old locus tag: J164_RS00125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007967594.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MLVGYMRVSSDSDRQSTNLQRDALLAAGVDARHLFEDRISGAKDDRAGLTKALEFVRPGDVLVVWKLDRLGRSLSHLLAIVTSLKDKQVAFRSLTEGMDTSTASGELLFHVFGALAQYERALIQERVVAGLAAARRRGRIGGRPLAIVGEKLEAIIAALNGGMSKAAVCRNFGVKRTTLIETLERVGWRGTGSTADGQQE
SIO_010081: AMD14_RS00120
subclass of: SO_0000673
so part of: AMD14_RS00120
location: 19020..19622
location: region:19020-19622:1
so has part: feature:19020-19622:1:exon

WP_011052950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:19020-19622:1:exon

AMD14_RS22410
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22410
old locus tag: J164_00030
pseudo: true
so part of: sequence
location: 19606..>19910
location: region:19606-19910:1
so has part: feature:19606-19910:1:exon
subclass of: SO_0000010

66913352
type: Gene
SIO_000068: ncbigene

position:19606:1
position: 19606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19910:1
position: 19910
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19606-19910:1:exon

AMD14_RS22410
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22410
old locus tag: J164_00030
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015060658.1
note: frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: AMD14_RS22410
subclass of: SO_0000673
so part of: AMD14_RS22410
location: 19606..>19910
location: region:19606-19910:1
so has part: feature:19606-19910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19606-19910:1:exon

AMD14_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00125
old locus tag: J164_00031
old locus tag: J164_RS00130
pseudo: true
so part of: sequence
location: complement(20077..>20283)
location: region:20077-20283:-1
so has part: feature:20077-20283:-1:exon
subclass of: SO_0000010

66909151
type: Gene
SIO_000068: ncbigene

position:20077:-1
position: 20077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20283:-1
position: 20283
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20077-20283:-1:exon

AMD14_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00125
old locus tag: J164_00031
old locus tag: J164_RS00130
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015472939.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
GO process: GO:0006313 - transposition, DNA-mediated [Evidence IEA]
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Tn3 family transposase
SIO_010081: AMD14_RS00125
subclass of: SO_0000673
so part of: AMD14_RS00125
location: complement(20077..>20283)
location: region:20077-20283:-1
so has part: feature:20077-20283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20077-20283:-1:exon

AMD14_RS22415
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS22415
pseudo: true
so part of: sequence
location: complement(20328..>20897)
location: region:20328-20897:-1
so has part: feature:20328-20897:-1:exon
subclass of: SO_0000010

66913353
type: Gene
SIO_000068: ncbigene

position:20328:-1
position: 20328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20897:-1
position: 20897
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20328-20897:-1:exon

AMD14_RS22415
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS22415
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007962299.1
note: incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: UPF0149 family protein
SIO_010081: AMD14_RS22415
subclass of: SO_0000673
so part of: AMD14_RS22415
location: complement(20328..>20897)
location: region:20328-20897:-1
so has part: feature:20328-20897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20328-20897:-1:exon

AMD14_RS00130
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00130
old locus tag: J164_00032
old locus tag: J164_RS00135
so part of: sequence
location: complement(20916..22130)
location: region:20916-22130:-1
so has part: feature:20916-22130:-1:exon
subclass of: SO_0000010

66909152
type: Gene
SIO_000068: ncbigene

position:20916:-1
position: 20916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22130:-1
position: 22130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20916-22130:-1:exon

AMD14_RS00130
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00130
old locus tag: J164_00032
old locus tag: J164_RS00135
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011050083.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: IS4-like element ISXac1 family transposase
translation: MRASEVLQKCLSNSLSGMHALRQRTLLGAVEALVHGGRLTLIDIARAWPGATRVRAPLKACDRLLCNRTLQAERSMIERDMAHWLLRGDQPVIVIDWSDLKPDKSWCLLRAAVPIGGRTLTLLDMVVAGKQQGSPGAEKRFLQQLRRMIPDDVRPILVTDAGFRTPWFRAVSAMGWDWVGRLRGRTQVKPQDVPDDAAQWIDSRRLHALASNRACELPPMQANRSDPLDCRLVLYAKTRLGRQQRNRRSPAKVSRASSSLKAAAREREPWLIVASPQLQAPSAKHLVNLYARRMQIELAFRDLKSHRYGQAMEDSLTRRGERLQILLLLNTLATFASWLAGLGCEATGIAQWLSPRSSTRKLYSTLRVGRQALARRWPMEPVSRWLERLRTLPEAVREQMTLVL
SIO_010081: AMD14_RS00130
subclass of: SO_0000673
so part of: AMD14_RS00130
location: complement(20916..22130)
location: region:20916-22130:-1
so has part: feature:20916-22130:-1:exon

WP_011050083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20916-22130:-1:exon

AMD14_RS24450
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS24450
pseudo: true
so part of: sequence
location: complement(<22204..22386)
location: region:22204-22386:-1
so has part: feature:22204-22386:-1:exon
subclass of: SO_0000010

66913498
type: Gene
SIO_000068: ncbigene

position:22204:-1
position: 22204
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:22386:-1
position: 22386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22204-22386:-1:exon

AMD14_RS24450
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS24450
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007962299.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: UPF0149 family protein
SIO_010081: AMD14_RS24450
subclass of: SO_0000673
so part of: AMD14_RS24450
location: complement(<22204..22386)
location: region:22204-22386:-1
so has part: feature:22204-22386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22204-22386:-1:exon

AMD14_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00135
old locus tag: J164_00034
old locus tag: J164_RS00140
so part of: sequence
location: complement(22405..25380)
location: region:22405-25380:-1
so has part: feature:22405-25380:-1:exon
subclass of: SO_0000010

66909153
type: Gene
SIO_000068: ncbigene

position:22405:-1
position: 22405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25380:-1
position: 25380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22405-25380:-1:exon

AMD14_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00135
old locus tag: J164_00034
old locus tag: J164_RS00140
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011345576.1
GO function: GO:0004803 - transposase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: Tn3-like element ISXc4 family transposase
translation: MPVSFLSTTQRERYGRYPDTLSSEELARYFHLDDDDREWIATKRRDSSRLGYALQLTTARFLGTFLEDPTAVPSPVLHTLSSQLGIADPSDCVIDYRTTRQRWQHTSEIRTRYGYREFTGTGVQFRLGRWLCALCWTGTDRPSALFDYANGWLVGHKVLLPGVTLLERFIAEIRSRMESRLWRLLVHGVTPEQRQRLDDLLKLVEGSRQSWLDRLRKGPVRVSAPALVAALLRIETVRGLGIKLPGTHVPPSRIAALARFASTAKVSAVARLPEVRRIATLVAFVHCLEASAQDDAIDVLDLLLRELFTKAEKEDRKVRQRSLKDLDRAASTLAEACRMLLDPALPDGELRERVYAAIGHDELAQALNEVRGLVRPPNDVFYTELEARKATVSRFLPALLRVIRFDANPAAQPLAQALQWLHEKPDHDPPTAIVGKAWQRHVVQDDGRINATAYSFCALDKLRSAIRRRDVFISPSWRYADPRAGLLAGAEWEASRPIVCRSLSLSAQPEATLSELTRELDETYRRVAARLPQNDAVRFENVGDKTELVLSPLEALEEPPSLIALRNEIKARMPRVDLPEILLEVAGRTGCMEAFTHLTERTARAADLTTSLCAVLMAEACNTGPEPLVRPDTPALKRDRLMWVDQNYVRDDTLTACNAVLVAAQSRIALARTWGGGDVASADGMRFVVPVRTIHAGPNPKYFNRGRGVTWYNLLSDQRTGLNAITVPGTLRDSLILLAVVLEQQTELQPTQIMTDTGAYSDLVFGLFRLSNYRFCPRLADVGGTRFWRVDPDADYGDLNALARQRVNLDRITPHWDDVLRLVGSLKLGLVPAMGIMRTLQVDERPTSLAQAIAEIGRIDKTIHTLNFIDDEARRRATLLQLNLGEGRHSLAREVFHGKRGELFQRYREGQEDQLSALGLVVNMIVLWNTLYMDAVLTQLRSEGYPVKPEDEARLSPFGHEHINMLGRYSFSVPEAVARGELRPLTKPNDP
SIO_010081: AMD14_RS00135
subclass of: SO_0000673
so part of: AMD14_RS00135
location: complement(22405..25380)
location: region:22405-25380:-1
so has part: feature:22405-25380:-1:exon

WP_011345576.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22405-25380:-1:exon

AMD14_RS00140
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00140
old locus tag: J164_00035
old locus tag: J164_RS00145
so part of: sequence
location: complement(25385..25804)
location: region:25385-25804:-1
so has part: feature:25385-25804:-1:exon
subclass of: SO_0000010

66909154
type: Gene
SIO_000068: ncbigene

position:25385:-1
position: 25385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25804:-1
position: 25804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25385-25804:-1:exon

AMD14_RS00140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00140
old locus tag: J164_00035
old locus tag: J164_RS00145
inference: COORDINATES: similar to AA sequence:RefSeq:WP_003491210.1
GO function: GO:0004521 - endoribonuclease activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: putative toxin-antitoxin system toxin component, PIN family
translation: MRVVLDTNVLLAALISSHSPPDIIYRGWLAARFELVTGTAQLDELRRVSRYPKIKAILPAHRVGTMINNMQRAVVLHVLPPLPDRIEVNDPNDAFLLAMALASEADYLVTGDRRAGLLQRGSIGRTRIVTPVTFCAEAL
SIO_010081: AMD14_RS00140
subclass of: SO_0000673
so part of: AMD14_RS00140
location: complement(25385..25804)
location: region:25385-25804:-1
so has part: feature:25385-25804:-1:exon

WP_003491210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25385-25804:-1:exon

AMD14_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00145
old locus tag: J164_00036
old locus tag: J164_RS00150
so part of: sequence
location: complement(25804..26043)
location: region:25804-26043:-1
so has part: feature:25804-26043:-1:exon
subclass of: SO_0000010

66909155
type: Gene
SIO_000068: ncbigene

position:26043:-1
position: 26043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25804-26043:-1:exon

AMD14_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00145
old locus tag: J164_00036
old locus tag: J164_RS00150
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013105051.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ribbon-helix-helix domain-containing protein
translation: MNTVRWNIAVSPDVDQSVRMFIAAQGGGRKGDLSRFIEDAVRAYLFERAVEQAKAATVGMGETELNDLIDEAVQWAREH
SIO_010081: AMD14_RS00145
subclass of: SO_0000673
so part of: AMD14_RS00145
location: complement(25804..26043)
location: region:25804-26043:-1
so has part: feature:25804-26043:-1:exon

WP_003491212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25804-26043:-1:exon

AMD14_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00150
old locus tag: J164_00037
old locus tag: J164_RS00155
so part of: sequence
location: 26257..27180
location: region:26257-27180:1
so has part: feature:26257-27180:1:exon
subclass of: SO_0000010

66909156
type: Gene
SIO_000068: ncbigene

position:26257:1
position: 26257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27180:1
position: 27180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26257-27180:1:exon

AMD14_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00150
old locus tag: J164_00037
old locus tag: J164_RS00155
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012477429.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase family protein
translation: MKIGYARVSTREQNPALQVDSLKAAGCERIYQDVASGAKTARPALDELLGQLRGGDVLVIWKLDRMGRSLKHLVELVGSLMERKVGLLSLNDPIDTTSAQGRFVFNLFATLAEFERELIRERTQAGLTAARARGRVGGRPKGLSPQAEATALAAETLYRERKLSVAAIAQKLHLSKSTLYSYLRHRGVEIGPYKQSAQSPINVSVVESGNADQPKVATILLTLRIENNSKFVRGKKRSIEHVEFFDLAQYDATRRPNGEYELKVPYDTDEELDEAVNDLLTDIACGADDRHCFSESHARMEGTDRHW
SIO_010081: AMD14_RS00150
subclass of: SO_0000673
so part of: AMD14_RS00150
location: 26257..27180
location: region:26257-27180:1
so has part: feature:26257-27180:1:exon

WP_003491216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26257-27180:1:exon

AMD14_RS00155
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
gene: avrBs3
locus tag: AMD14_RS00155
old locus tag: J164_00038
old locus tag: J164_RS00160
so part of: sequence
location: complement(27299..30589)
location: region:27299-30589:-1
so has part: feature:27299-30589:-1:exon
subclass of: SO_0000010

66909157
type: Gene
SIO_000068: ncbigene

position:27299:-1
position: 27299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30589:-1
position: 30589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27299-30589:-1:exon

AMD14_RS00155
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
gene: avrBs3
locus tag: AMD14_RS00155
old locus tag: J164_00038
old locus tag: J164_RS00160
inference: COORDINATES: similar to AA sequence:RefSeq:WP_032488475.1
GO process: GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type III secretion system effector avirulence protein AvrBs3
translation: MDPIRSRTPSPARELLPGPQPDGVQPTADRGVSPPAGGPLDGLPARRTISRTRLPSPPAPSPAFSAGSFSDLLRQFDPSLFNTSLFDSLPPFGAHHTEAATGEWDEVQSGLRAADAPPPTMRVAVTAARPPRAKPAPRRRAAQPSDASPAAQVDLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASNIGGKQALETVQALLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTLDQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGRPALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKGLPHAPALIKRTNRRIPERTSHRVADHAQVVRVLGFFQCHSHPAQAFDDAMTQFGMSRHGLLQLFRRVGVTELEARSGTLPPASQRWDRILQASGMKRAKPSPTSTQTPDQASLHAFADSLERDLDAPSPMHEGDQTRASSRKRSRSDRAVTGPSAQQSFEVRVPEQRDALHLPLSWRVKRPRTSIGGGLPDPGTPTAADLAASSTVMREQDEDPFAGAADDFPAFNEEELAWLMELLPQ
SIO_010081: AMD14_RS00155
subclass of: SO_0000673
so part of: AMD14_RS00155
location: complement(27299..30589)
location: region:27299-30589:-1
so has part: feature:27299-30589:-1:exon

WP_045720653.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27299-30589:-1:exon

AMD14_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00165
old locus tag: J164_00041
old locus tag: J164_RS00170
so part of: sequence
location: complement(31843..32079)
location: region:31843-32079:-1
so has part: feature:31843-32079:-1:exon
subclass of: SO_0000010

66909158
type: Gene
SIO_000068: ncbigene

position:31843:-1
position: 31843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32079:-1
position: 32079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31843-32079:-1:exon

AMD14_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00165
old locus tag: J164_00041
old locus tag: J164_RS00170
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005934673.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: plasmid partition protein ParG
translation: MSTKKVQIGTKPTNKPAPVAADAWVESRSSSDEPEQMKRLTIDVPDSLHRQIKTACAQRGTKIADEVRELLLQKYRKQ
SIO_010081: AMD14_RS00165
subclass of: SO_0000673
so part of: AMD14_RS00165
location: complement(31843..32079)
location: region:31843-32079:-1
so has part: feature:31843-32079:-1:exon

WP_015463816.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31843-32079:-1:exon

AMD14_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00170
old locus tag: J164_00042
old locus tag: J164_RS00175
so part of: sequence
location: complement(32076..32705)
location: region:32076-32705:-1
so has part: feature:32076-32705:-1:exon
subclass of: SO_0000010

66909159
type: Gene
SIO_000068: ncbigene

position:32076:-1
position: 32076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32705:-1
position: 32705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32076-32705:-1:exon

AMD14_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00170
old locus tag: J164_00042
old locus tag: J164_RS00175
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017158739.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: ParA family partition ATPase
translation: MIVGVLNQKGGVGKTTLSVNLAASLARTGARVLLIDADPQGSALDWAAAREGEPLFSVVGFPRPTVHKDIAQLGQGYDHIVIDGPPRVTDLARSAIMAADVVLIPVQPSPYDIWAADEVVKLIEEARVYKEKLKSAFVVNRKIANTAIGRDVGEALAAYPVPVLAASVTQRVVFAEAAAQGRAVHEIDQAGPAAAEIEAVKAELMEFAR
SIO_010081: AMD14_RS00170
subclass of: SO_0000673
so part of: AMD14_RS00170
location: complement(32076..32705)
location: region:32076-32705:-1
so has part: feature:32076-32705:-1:exon

WP_015463817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32076-32705:-1:exon

AMD14_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 611301
locus tag: AMD14_RS00175
old locus tag: J164_00043
old locus tag: J164_RS00180
so part of: sequence
location: complement(32788..33525)
location: region:32788-33525:-1
so has part: feature:32788-33525:-1:exon
subclass of: SO_0000010

66909160
type: Gene
SIO_000068: ncbigene

position:32788:-1
position: 32788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33525:-1
position: 33525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32788-33525:-1:exon

AMD14_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 611301
locus tag: AMD14_RS00175
old locus tag: J164_00043
old locus tag: J164_RS00180
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011052960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA-binding protein
translation: MDPSQDARDRILAAADALYEQAGREVFPTVDAVRKAAKANMNEASTVMKEWRRTQARPASVAVQVPEPVQQAAGLAVVAIWQAAQEVANDALRAAQAGWEAERQEVEALSQQMADAYEAQALELEAAQARIAELDAALQQAVTAAATHQAALDQVRTALVDLQQRASTAEARASELRTELDRAHLVAAEQRNAAGQAREEAANLRGRLAAFESVAASPKAGQARPGRAGAAPASMPSSGAAGLSC
SIO_010081: AMD14_RS00175
subclass of: SO_0000673
so part of: AMD14_RS00175
location: complement(32788..33525)
location: region:32788-33525:-1
so has part: feature:32788-33525:-1:exon

WP_011052960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32788-33525:-1:exon