Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia.
Involvement of Burkholderiaceae and sulfurous volatiles in disease-suppressive soils
Submitted (17-NOV-2017) Microbial Ecology, Netherlands Institute of Ecology, Droevendaalsesteeg 10, Wageningen 6708 PB, Netherlands
REFSEQ INFORMATION: The reference sequence is identical to\nCP024936.1.\nBacteria and source DNA available from The Netherlands Institute of\nEcology.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 23-NOV-2016\nAssembly Method :: PacBio HGAP3 v. 2.3\nAssembly Name :: Paraburkholderia graminis PHS1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 120.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 04/23/2023 04:20:41\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.5\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 6,736\nCDSs (total) :: 6,652\nGenes (coding) :: 6,568\nCDSs (with protein) :: 6,568\nGenes (RNA) :: 84\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 62\nncRNAs :: 4\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 40 of 84\nPseudo Genes (incomplete) :: 58 of 84\nPseudo Genes (internal stop) :: 6 of 84\nPseudo Genes (multiple problems) :: 19 of 84\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF012312.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006223477.1
COORDINATES: protein motif:HMM:NF012885.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013094623.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014598303.1
COORDINATES: similar to AA sequence:RefSeq:WP_019719689.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006051033.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012398.2
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
NAD-dependent succinate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011694606.1
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_008917541.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_007579809.1
COORDINATES: similar to AA sequence:RefSeq:WP_003462945.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
type IV secretory system conjugative DNA transfer family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013689507.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012427379.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018422356.1
COORDINATES: similar to AA sequence:RefSeq:WP_017335753.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661227.1
COORDINATES: similar to AA sequence:RefSeq:WP_011695039.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010973020.1
COORDINATES: similar to AA sequence:RefSeq:WP_010973012.1
GO:0018784 - (S)-2-haloacid dehalogenase activity [Evidence IEA]
GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012427751.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011880464.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549830.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_047215127.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024880.2
GO:0008168 - methyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF033590.1
COORDINATES: protein motif:HMM:NF015431.2
GO:0001216 - DNA-binding transcription activator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024966.2
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006397256.1
COORDINATES: protein motif:HMM:NF024771.2
mandelate racemase/muconate lactonizing enzyme family protein
COORDINATES: protein motif:HMM:NF014698.2
GO:0051213 - dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013519862.1
GO:0003824 - catalytic activity [Evidence IEA]
fumarylacetoacetate hydrolase family protein
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF012402.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009524061.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013689717.1
COORDINATES: similar to AA sequence:RefSeq:WP_003801777.1
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006390327.1
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_019451408.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014896191.1
frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011329755.1
COORDINATES: similar to AA sequence:RefSeq:WP_012747229.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012365318.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012365317.1
COORDINATES: similar to AA sequence:RefSeq:WP_012339018.1
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006480100.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011695172.1
GO:0004601 - peroxidase activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019579173.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF013237.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0019346 - transsulfuration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009770894.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012385.2
sigma-54-dependent Fis family transcriptional regulator
COORDINATES: protein motif:HMM:NF014035.2
COORDINATES: similar to AA sequence:RefSeq:WP_014900945.1
COORDINATES: protein motif:HMM:NF025178.2
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014900948.1
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
aromatic-ring-hydroxylating dioxygenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014900949.1
COORDINATES: similar to AA sequence:RefSeq:WP_011827962.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018085011.1
GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
acetaldehyde dehydrogenase (acetylating)
COORDINATES: similar to AA sequence:RefSeq:WP_013743528.1
GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006494596.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006480150.1
2,4'-dihydroxyacetophenone dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011356735.1
COORDINATES: similar to AA sequence:RefSeq:WP_006488527.1
COORDINATES: similar to AA sequence:RefSeq:WP_011356737.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_017774491.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013094116.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_076611313.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013539.2
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013360990.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014185223.1
COORDINATES: similar to AA sequence:RefSeq:WP_014903104.1
sugar ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_020682055.1
COORDINATES: protein motif:HMM:TIGR01312.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008721119.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_008924533.1
COORDINATES: similar to AA sequence:RefSeq:WP_008924532.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_000988354.1
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: similar to AA sequence:RefSeq:WP_013105979.1
COORDINATES: similar to AA sequence:RefSeq:WP_017335272.1
COORDINATES: similar to AA sequence:RefSeq:WP_006158043.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009766417.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: similar to AA sequence:RefSeq:WP_019337289.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014087228.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004522525.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015837 - amine transport [Evidence IEA]
The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc.; The N-terminal region of this protein, as described by TIGR01726, is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits, which specificities that include histidine, arginine, glutamine, glutamate, L-cystine (sic), the opines (in Agrobacterium) octopine and nopaline, etc; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_020065252.1
COORDINATES: similar to AA sequence:RefSeq:WP_015602223.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013635593.1
COORDINATES: similar to AA sequence:RefSeq:WP_006413562.1
COORDINATES: protein motif:HMM:NF025079.2
COORDINATES: protein motif:HMM:NF013676.2
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018433223.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
transporter substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011853975.1
molybdopterin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011491567.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004188558.1
GO:0019645 - anaerobic electron transport chain [Evidence IEA]
DmsC/YnfH family molybdoenzyme membrane anchor subunit
COORDINATES: protein motif:HMM:NF019303.2
COORDINATES: similar to AA sequence:RefSeq:WP_011872576.1
COORDINATES: similar to AA sequence:RefSeq:WP_011504961.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_076611734.1
COORDINATES: similar to AA sequence:RefSeq:WP_012434625.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047345.1
COORDINATES: similar to AA sequence:RefSeq:WP_017475148.1
PDDEXK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013094660.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420284.1
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: similar to AA sequence:RefSeq:WP_006050720.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0019829 - ATPase-coupled monoatomic cation transmembrane transporter activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA]; GO:0015662 - P-type ion transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007182771.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050722.1
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006050723.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880346.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006050726.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050727.1
GO:0032559 - adenyl ribonucleotide binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013592305.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182773.1
carboxypeptidase regulatory-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013591972.1
COORDINATES: similar to AA sequence:RefSeq:WP_006760344.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428143.1
COORDINATES: similar to AA sequence:RefSeq:WP_013591473.1
COORDINATES: similar to AA sequence:RefSeq:WP_013591472.1
COORDINATES: similar to AA sequence:RefSeq:WP_013592301.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050749.1
PAS domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_013343334.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050751.1
COORDINATES: similar to AA sequence:RefSeq:WP_012427457.1
GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013591469.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050754.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050755.1
GO:0016746 - acyltransferase activity [Evidence IEA]
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013089515.1
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006050757.1
COORDINATES: similar to AA sequence:RefSeq:WP_007181508.1
COORDINATES: similar to AA sequence:RefSeq:WP_013338963.1
GO:0071949 - FAD binding [Evidence IEA]; GO:0050151 - oleate hydratase activity [Evidence IEA]
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006050759.1
COORDINATES: similar to AA sequence:RefSeq:WP_014972815.1
COORDINATES: similar to AA sequence:RefSeq:WP_009968117.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488711.1
COORDINATES: similar to AA sequence:RefSeq:WP_009900457.1
COORDINATES: similar to AA sequence:RefSeq:WP_013591460.1
COORDINATES: similar to AA sequence:RefSeq:WP_013338957.1
COORDINATES: similar to AA sequence:RefSeq:WP_014972810.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014972809.1
fumarate/nitrate reduction transcriptional regulator Fnr
COORDINATES: similar to AA sequence:RefSeq:WP_011488716.1
COORDINATES: similar to AA sequence:RefSeq:WP_014973211.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050781.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093793.1
COORDINATES: similar to AA sequence:RefSeq:WP_007181492.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014618458.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050758.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050764.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
hopanoid biosynthesis-associated protein HpnK
COORDINATES: similar to AA sequence:RefSeq:WP_006050765.1
GO:0016757 - glycosyltransferase activity [Evidence IEA]
bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI
COORDINATES: similar to AA sequence:RefSeq:WP_006050766.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050767.1
COORDINATES: similar to AA sequence:RefSeq:WP_006052153.1
COORDINATES: similar to AA sequence:RefSeq:WP_013588228.1
lysylphosphatidylglycerol synthase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006050770.1
COORDINATES: similar to AA sequence:RefSeq:WP_007181785.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
hopanoid biosynthesis associated radical SAM protein HpnJ
COORDINATES: similar to AA sequence:RefSeq:WP_018420717.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661238.1
COORDINATES: similar to AA sequence:RefSeq:WP_008037518.1
COORDINATES: similar to AA sequence:RefSeq:WP_020384427.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739397.1
COORDINATES: similar to AA sequence:RefSeq:WP_018309101.1
COORDINATES: similar to AA sequence:RefSeq:WP_006162672.1
GO:0015293 - symporter activity [Evidence IEA]
GO:0006847 - plasma membrane acetate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014726102.1
COORDINATES: similar to AA sequence:RefSeq:WP_014972554.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341384.1
COORDINATES: similar to AA sequence:RefSeq:WP_013341385.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739412.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013341387.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013341388.1
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: similar to AA sequence:RefSeq:WP_008917785.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013089215.1
COORDINATES: similar to AA sequence:RefSeq:WP_013089216.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046847.1
GO:0051782 - negative regulation of cell division [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
translesion DNA synthesis-associated protein ImuA
COORDINATES: similar to AA sequence:RefSeq:WP_006046846.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046844.1
COORDINATES: similar to AA sequence:RefSeq:WP_013338207.1
COORDINATES: similar to AA sequence:RefSeq:WP_007579983.1
COORDINATES: similar to AA sequence:RefSeq:WP_012405273.1
COORDINATES: similar to AA sequence:RefSeq:WP_007735578.1
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
sensor domain-containing diguanylate cyclase
COORDINATES: similar to AA sequence:RefSeq:WP_012428382.1
COORDINATES: protein motif:HMM:NF017528.2
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: similar to AA sequence:RefSeq:WP_054926070.1
COORDINATES: similar to AA sequence:RefSeq:WP_007183037.1
GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]
GO:0000373 - Group II intron splicing [Evidence IEA]
group II intron reverse transcriptase/maturase
COORDINATES: similar to AA sequence:RefSeq:WP_014917473.1
COORDINATES: similar to AA sequence:RefSeq:WP_018008170.1
GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005345517.1
COORDINATES: similar to AA sequence:RefSeq:WP_006164211.1
COORDINATES: similar to AA sequence:RefSeq:WP_018420346.1
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_003403629.1
COORDINATES: similar to AA sequence:RefSeq:WP_006382591.1
COORDINATES: similar to AA sequence:RefSeq:WP_007743684.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690855.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483292.1
COORDINATES: protein motif:HMM:TIGR02118.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182619.1
COORDINATES: similar to AA sequence:RefSeq:WP_011516041.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013088974.1
COORDINATES: similar to AA sequence:RefSeq:WP_007179252.1
COORDINATES: similar to AA sequence:RefSeq:WP_006484960.1
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_007584440.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483276.1
COORDINATES: similar to AA sequence:RefSeq:WP_005464459.1
GO:0004519 - endonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
type II toxin-antitoxin system YoeB family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_012366507.1
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_020070957.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047396.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070959.1
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006047398.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047399.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070961.1
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020070962.1
COORDINATES: similar to AA sequence:RefSeq:WP_015671531.1
COORDINATES: similar to AA sequence:RefSeq:WP_010617892.1
COORDINATES: similar to AA sequence:RefSeq:WP_008113272.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0050661 - NADP binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015671544.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070956.1
COORDINATES: similar to AA sequence:RefSeq:WP_017642659.1
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_016347621.1
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF021469.2
type IV toxin-antitoxin system AbiEi family antitoxin
COORDINATES: protein motif:HMM:NF025844.2
COORDINATES: protein motif:HMM:NF039808.1
COORDINATES: similar to AA sequence:RefSeq:WP_004629352.1
COORDINATES: protein motif:HMM:NF021431.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
type II toxin-antitoxin system HigB family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_018432843.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_013094417.1
COORDINATES: similar to AA sequence:RefSeq:WP_009771279.1
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]
RepB family plasmid replication initiator protein
COORDINATES: similar to AA sequence:RefSeq:WP_007182594.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432848.1
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: similar to AA sequence:RefSeq:WP_007182592.1
COORDINATES: similar to AA sequence:RefSeq:WP_007588639.1
transglycosylase SLT domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006417164.1
COORDINATES: similar to AA sequence:RefSeq:WP_006417168.1
lytic transglycosylase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011875483.1
toxin co-regulated pilus biosynthesis Q family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013094407.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094406.1
COORDINATES: similar to AA sequence:RefSeq:WP_013699984.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094404.1
COORDINATES: similar to AA sequence:RefSeq:WP_012367219.1
COORDINATES: similar to AA sequence:RefSeq:WP_008343102.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094401.1
COORDINATES: protein motif:HMM:NF012415.2
COORDINATES: similar to AA sequence:RefSeq:WP_012367213.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094397.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217965.1
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018432868.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
nuclease-related domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_018432869.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094391.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432871.1
COORDINATES: similar to AA sequence:RefSeq:WP_011486721.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432873.1
GO:0003896 - DNA primase activity [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
primase-helicase zinc-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013094387.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432875.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094385.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432878.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094776.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094774.1
Lar family restriction alleviation protein
COORDINATES: similar to AA sequence:RefSeq:WP_018432882.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432883.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094769.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094766.1
COORDINATES: protein motif:HMM:NF014442.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011875514.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094761.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217989.1
COORDINATES: protein motif:HMM:TIGR03742.1
COORDINATES: similar to AA sequence:RefSeq:WP_008645393.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432905.1
COORDINATES: similar to AA sequence:RefSeq:WP_011875520.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194292.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094752.1
GO:0019867 - outer membrane [Evidence IEA]
glycine zipper 2TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012367179.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071137.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071139.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094747.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094746.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432917.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700032.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432919.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432920.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004289.1
COORDINATES: similar to AA sequence:RefSeq:WP_011875532.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094737.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432932.1
VirB3 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_018432933.1
VirB4 family type IV secretion system protein
COORDINATES: similar to AA sequence:RefSeq:WP_013094734.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071143.1
GO:0030255 - protein secretion by the type IV secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013700042.1
COORDINATES: similar to AA sequence:RefSeq:WP_006757255.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0015074 - DNA integration [Evidence IEA]
Members of this protein family are the putative conjugative coupling factor, TraD, as the term is used for the SXT and TOL plasmid systems; Derived by automated computational analysis using gene prediction method: Protein Homology.
conjugative transfer system coupling protein TraD
COORDINATES: similar to AA sequence:RefSeq:WP_013094730.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094729.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094728.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432942.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071148.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018432946.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094721.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071153.1
COORDINATES: similar to AA sequence:RefSeq:WP_007585048.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182572.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182571.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432952.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182569.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071160.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094714.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876309.1
COORDINATES: protein motif:HMM:NF017182.2
COORDINATES: similar to AA sequence:RefSeq:WP_020071168.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020071169.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071170.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071171.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071172.1
COORDINATES: similar to AA sequence:RefSeq:WP_020071173.1
GO:0005515 - protein binding [Evidence IEA]
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015877482.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406666.1
COORDINATES: similar to AA sequence:RefSeq:WP_012406665.1
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020070198.1
COORDINATES: similar to AA sequence:RefSeq:WP_014335858.1
COORDINATES: similar to AA sequence:RefSeq:WP_012432122.1
COORDINATES: similar to AA sequence:RefSeq:WP_018310047.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046914.1
filamentous hemagglutinin N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006406875.1
GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007584244.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404456.1
COORDINATES: similar to AA sequence:RefSeq:WP_013093213.1
GO:0045027 - DNA end binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014194251.1
COORDINATES: similar to AA sequence:RefSeq:WP_020067774.1
COORDINATES: similar to AA sequence:RefSeq:WP_014617575.1
COORDINATES: similar to AA sequence:RefSeq:WP_014194242.1
COORDINATES: similar to AA sequence:RefSeq:WP_008078971.1
COORDINATES: similar to AA sequence:RefSeq:WP_008079005.1
COORDINATES: similar to AA sequence:RefSeq:WP_014750015.1
3-keto-5-aminohexanoate cleavage protein
COORDINATES: similar to AA sequence:RefSeq:WP_006050639.1
COORDINATES: similar to AA sequence:RefSeq:WP_007839292.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050637.1
COORDINATES: similar to AA sequence:RefSeq:WP_012428227.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050635.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050634.1
COORDINATES: similar to AA sequence:RefSeq:WP_011881946.1
COORDINATES: similar to AA sequence:RefSeq:WP_012338377.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_005003585.1
GO:0009307 - DNA restriction-modification system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014833957.1
HNH endonuclease signature motif containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012464975.1
COORDINATES: similar to AA sequence:RefSeq:WP_013094668.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047408.1
COORDINATES: protein motif:HMM:NF018446.2
COORDINATES: similar to AA sequence:RefSeq:WP_020070967.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070966.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047404.1
COORDINATES: similar to AA sequence:RefSeq:WP_006047403.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070963.1
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: similar to AA sequence:RefSeq:WP_013587614.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020067633.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070953.1
COORDINATES: similar to AA sequence:RefSeq:WP_020070952.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012364566.1
GO:0004061 - arylformamidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011492157.1
aspartate/glutamate racemase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011617876.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494228.1
COORDINATES: similar to AA sequence:RefSeq:WP_011492154.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011492153.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494224.1
COORDINATES: similar to AA sequence:RefSeq:WP_011494223.1
COORDINATES: similar to AA sequence:RefSeq:WP_011617880.1
COORDINATES: similar to AA sequence:RefSeq:WP_012431187.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011494220.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012431189.1
COORDINATES: similar to AA sequence:RefSeq:WP_011488753.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_032489537.1
COORDINATES: similar to AA sequence:RefSeq:WP_008919193.1
COORDINATES: similar to AA sequence:RefSeq:WP_011491759.1
COORDINATES: similar to AA sequence:RefSeq:WP_015001833.1
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006998270.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020067523.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177705.1
COORDINATES: similar to AA sequence:RefSeq:WP_012432324.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177708.1
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014479.2
muconolactone Delta-isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_007590508.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182448.1
COORDINATES: similar to AA sequence:RefSeq:WP_007590510.1
penicillin-binding protein activator LpoB
COORDINATES: similar to AA sequence:RefSeq:WP_015876923.1
COORDINATES: similar to AA sequence:RefSeq:WP_007590512.1
COORDINATES: similar to AA sequence:RefSeq:WP_012401224.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182443.1
COORDINATES: similar to AA sequence:RefSeq:WP_020747939.1
COORDINATES: similar to AA sequence:RefSeq:WP_012431967.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008352648.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: similar to AA sequence:RefSeq:WP_020071129.1
GO:0030261 - chromosome condensation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018494937.1
type II toxin-antitoxin system RelB/DinJ family antitoxin
COORDINATES: similar to AA sequence:RefSeq:WP_013845238.1
GO:0008657 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence IEA]
GO:0030541 - plasmid partitioning [Evidence IEA]; GO:0051290 - protein heterotetramerization [Evidence IEA]
type II toxin-antitoxin system RelE/ParE family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_006049832.1
COORDINATES: similar to AA sequence:RefSeq:WP_018432603.1
COORDINATES: similar to AA sequence:RefSeq:WP_007739954.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007586663.1
GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007739952.1
GO:0018822 - nitrile hydratase activity [Evidence IEA]
GO:0050898 - nitrile metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_007739951.1
COORDINATES: similar to AA sequence:RefSeq:WP_012426962.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700195.1
HoxN/HupN/NixA family nickel/cobalt transporter
COORDINATES: similar to AA sequence:RefSeq:WP_019648859.1
COORDINATES: protein motif:HMM:NF033572.1
COORDINATES: protein motif:HMM:NF036968.2
COORDINATES: similar to AA sequence:RefSeq:WP_012777168.1
COORDINATES: similar to AA sequence:RefSeq:WP_012777167.1
COORDINATES: similar to AA sequence:RefSeq:WP_012109870.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_011646275.1
COORDINATES: similar to AA sequence:RefSeq:WP_013078923.1
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF024242.2
COORDINATES: protein motif:HMM:NF040248.1
COORDINATES: similar to AA sequence:RefSeq:WP_011766331.1
COORDINATES: similar to AA sequence:RefSeq:WP_010097380.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660001.1
COORDINATES: similar to AA sequence:RefSeq:WP_011356647.1
COORDINATES: similar to AA sequence:RefSeq:WP_006756270.1
COORDINATES: similar to AA sequence:RefSeq:WP_014900618.1
GO:0050570 - 4-hydroxythreonine-4-phosphate dehydrogenase activity [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]; GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_010097392.1
COORDINATES: similar to AA sequence:RefSeq:WP_013699291.1
COORDINATES: similar to AA sequence:RefSeq:WP_013894029.1
COORDINATES: similar to AA sequence:RefSeq:WP_011654420.1
COORDINATES: similar to AA sequence:RefSeq:WP_018183808.1
COORDINATES: similar to AA sequence:RefSeq:WP_010459472.1
COORDINATES: similar to AA sequence:RefSeq:WP_013597003.1
COORDINATES: similar to AA sequence:RefSeq:WP_013596997.1
cytochrome b561 domain-containing protein