Ficedula albicollis isolate OC2 linkage group LGE22, FicAlb1.5, whole genome shotgun sequence.
type: Entry
definition: Ficedula albicollis isolate OC2 linkage group LGE22, FicAlb1.5, whole genome shotgun sequence.
sequence version: NC_021703.1
sequence date: 2016-04-20
sequence: sequence
division: CON
label: NC_021703.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA208061
dblink: SAMN02981387
keyword: WGS
keyword: RefSeq
source: Ficedula albicollis (collared flycatcher)
organism: Ficedula albicollis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
reference: 1
references: 23103876
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002020.1.\nAssembly name: FicAlb1.5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Uppsala University on 2013/06/24.\nThe original whole-genome shotgun project has the accession\nAGTO00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: FicAlb1.5\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina GAII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Ficedula albicollis Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 2153636
topology: linear
so has quality: SO_0000987
location: 1..2153636
location: region:1-2153636:1
RO_0002162: 59894

NC_021703
type: RefSeq
SIO_000068: refseq

PRJNA208061
type: BioProject
SIO_000068: bioproject

SAMN02981387
type: BioSample
SIO_000068: biosample

1
title: The genomic landscape of species divergence in Ficedula flycatchers
author: Ellegren, H.
author: Smeds, L.
author: Burri, R.
author: Olason, P.I.
author: Backstrom, N.
author: Kawakami, T.
author: Kunstner, A.
author: Makinen, H.
author: Nadachowska-Brzyska, K.
author: Qvarnstrom, A.
author: Uebbing, S.
author: Wolf, J.B.
journal: Nature
volume: 491
issue: 7426
pages: 756-760
year: 2012
pubmed: 23103876

23103876
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2153636:1
position: 2153636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-2153636:1:source
so part of: sequence
organism: Ficedula albicollis
mol type: genomic DNA
isolate: OC2
sex: male
country: Sweden: Oland
collection date: 2009
linkage group: LGE22

59894
type: Taxonomy
SIO_000068: taxonomy

LOC101807863
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101807863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 20681..81472
location: region:20681-81472:1
so has part: feature:20681-81472:1:exon
subclass of: SO_0000010

101807863
type: Gene
SIO_000068: ncbigene

position:20681:1
position: 20681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81472:1
position: 81472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20681-81472:1:exon

LOC101807863
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101807863
product: cyclic AMP-dependent transcription factor ATF-7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304923.1
SIO_010081: LOC101807863
subclass of: SO_0000673
so part of: LOC101807863
location: join(20681..20791,53730..53826,60258..60383,71415..71749,75523..75750,77251..77675,80609..81472)
location: region:20681-81472:1
so has part: feature:20681-20791:1:exon
so has part: feature:53730-53826:1:exon
so has part: feature:60258-60383:1:exon
so has part: feature:71415-71749:1:exon
so has part: feature:75523-75750:1:exon
so has part: feature:77251-77675:1:exon
so has part: feature:80609-81472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20681-20791:1:exon

position:20791:1
position: 20791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53730-53826:1:exon

position:53730:1
position: 53730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53826:1
position: 53826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60258-60383:1:exon

position:60258:1
position: 60258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60383:1
position: 60383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:71415-71749:1:exon

position:71415:1
position: 71415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71749:1
position: 71749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:75523-75750:1:exon

position:75523:1
position: 75523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:75750:1
position: 75750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:77251-77675:1:exon

position:77251:1
position: 77251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77675:1
position: 77675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:80609-81472:1:exon

position:80609:1
position: 80609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101807863
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101807863
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-7-like
translation: MGDDRPFVCSAPGCGQRFTNEDHLAVHKHKHELTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKRAAEDEEKKARDGGITPSPREVQVCPAPGWRMMMMMMMMMMLLLLMLLMMQGLFRCRSPSGSLPLVVQLANGQTVPVLPGPPLQMPSVISVREASRAPAPSRDRPWAGAGGRGGGGRGAGAALIPVAVPVPVQVSPAQPTPSTGGRRKRAVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNEVAQLKQLLLAHKDCPVTALQKKTQGYLGESGAPGAWHGAGCQGRGGWCPVTSVTSHHLCRAGLSHTGQSRAGLAGTPKSPHTPQGISTPLLLRRVPRIVPQGWSWQPGPCPGQGLVPLPVQGVGCASTSPCSRLAQMAGQRTELAVPVASHVIMAPQSQSAGR
SIO_010081: LOC101807863
subclass of: SO_0000673
so part of: LOC101807863
location: join(20744..20791,53730..53826,60258..60383,71415..71749,75523..75750,77251..77675,80609..80702)
location: region:20744-80702:1
so has part: feature:20744-20791:1:exon
so has part: feature:53730-53826:1:exon
so has part: feature:60258-60383:1:exon
so has part: feature:71415-71749:1:exon
so has part: feature:75523-75750:1:exon
so has part: feature:77251-77675:1:exon
so has part: feature:80609-80702:1:exon

XP_016160409.1
type: Protein
SIO_000068: ncbiprotein

position:20744:1
position: 20744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80702:1
position: 80702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20744-20791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53730-53826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60258-60383:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71415-71749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75523-75750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77251-77675:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:80609-80702:1:exon

LOC101807474
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101807474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 98687..107632
location: region:98687-107632:1
so has part: feature:98687-107632:1:exon
subclass of: SO_0000010

101807474
type: Gene
SIO_000068: ncbigene

position:98687:1
position: 98687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107632:1
position: 107632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98687-107632:1:exon

LOC101807474
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101807474
product: mitogen-activated protein kinase kinase kinase 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304924.1
SIO_010081: LOC101807474
subclass of: SO_0000673
so part of: LOC101807474
location: join(98687..98889,99699..99890,100829..100987,101310..101468,103157..103291,103493..103609,103897..104008,107477..107632)
location: region:98687-107632:1
so has part: feature:98687-98889:1:exon
so has part: feature:99699-99890:1:exon
so has part: feature:100829-100987:1:exon
so has part: feature:101310-101468:1:exon
so has part: feature:103157-103291:1:exon
so has part: feature:103493-103609:1:exon
so has part: feature:103897-104008:1:exon
so has part: feature:107477-107632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98687-98889:1:exon

position:98889:1
position: 98889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:99699-99890:1:exon

position:99699:1
position: 99699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99890:1
position: 99890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100829-100987:1:exon

position:100829:1
position: 100829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100987:1
position: 100987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101310-101468:1:exon

position:101310:1
position: 101310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101468:1
position: 101468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:103157-103291:1:exon

position:103157:1
position: 103157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103291:1
position: 103291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:103493-103609:1:exon

position:103493:1
position: 103493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103609:1
position: 103609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:103897-104008:1:exon

position:103897:1
position: 103897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104008:1
position: 104008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107477-107632:1:exon

position:107477:1
position: 107477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101807474
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101807474
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 12
translation: MPALPADPWEVPFEEILDLQWVGSGAQGAVFLGRFHGEEVAVKKVRDLKETDIKHLRKLKHPNIITFKGVCTQAPCYCIIMEFCAQGQLYEVLRAGRKVTPSLLVDWSMGIAGGMNYLHLHKIIHRDLKSPNMLITYDDVVKISDFGTSKELIDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSSCPDGFKVLLRQCWGPPPPLPQAEWREEVKLHFEKIKSEGTCLHRLEEELINRRREELRHALDIREHYERKLERANNLYMELSALMLQLELKEKELLRREQALEKRYPGLFKPRVPRGLLHGNAVETLIKKRNVPAEGPPGRARCGTHLPEHVLTVATLLQVQTGKRGQVRPQGTGDAIPPPPEKE
SIO_010081: LOC101807474
subclass of: SO_0000673
so part of: LOC101807474
location: join(98687..98889,99699..99890,100829..100987,101310..101468,103157..103291,103493..103609,103897..104008,107477..107632)
location: region:98687-107632:1
so has part: feature:98687-98889:1:exon
so has part: feature:99699-99890:1:exon
so has part: feature:100829-100987:1:exon
so has part: feature:101310-101468:1:exon
so has part: feature:103157-103291:1:exon
so has part: feature:103493-103609:1:exon
so has part: feature:103897-104008:1:exon
so has part: feature:107477-107632:1:exon

XP_016160410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:98687-98889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:99699-99890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100829-100987:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101310-101468:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103157-103291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103493-103609:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103897-104008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107477-107632:1:exon

PCBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(110055..120818)
location: region:110055-120818:-1
so has part: feature:110055-120818:-1:exon
subclass of: SO_0000010

101822226
type: Gene
SIO_000068: ncbigene

position:110055:-1
position: 110055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120818:-1
position: 120818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110055-120818:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016304982.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110055..110313,110853..110905,111790..111828,112226..112298,113584..113625,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119997))
location: region:110055-119997:-1
so has part: feature:119921-119997:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110055-110313:-1:exon

position:119997:-1
position: 119997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119921-119997:-1:exon

position:119921:-1
position: 119921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119538-119561:-1:exon

position:119538:-1
position: 119538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119561:-1
position: 119561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

position:119386:-1
position: 119386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119418:-1
position: 119418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

position:118696:-1
position: 118696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118812:-1
position: 118812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

position:117423:-1
position: 117423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117554:-1
position: 117554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

position:116734:-1
position: 116734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116862:-1
position: 116862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

position:116177:-1
position: 116177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116251:-1
position: 116251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:113584-113625:-1:exon

position:113584:-1
position: 113584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113625:-1
position: 113625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:112226-112298:-1:exon

position:112226:-1
position: 112226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112298:-1
position: 112298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:111790-111828:-1:exon

position:111790:-1
position: 111790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111828:-1
position: 111828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:110853-110905:-1:exon

position:110853:-1
position: 110853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110905:-1
position: 110905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:110055-110313:-1:exon

position:110313:-1
position: 110313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005061334.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110056..110313,110853..110905,111790..111828,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,120301..120324,120684..120818))
location: region:110056-120818:-1
so has part: feature:120684-120818:-1:exon
so has part: feature:120301-120324:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110056-110313:-1:exon

position:110056:-1
position: 110056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120684-120818:-1:exon

position:120684:-1
position: 120684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:120301-120324:-1:exon

position:120301:-1
position: 120301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120324:-1
position: 120324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

position:114570:-1
position: 114570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114656:-1
position: 114656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110056-110313:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016304981.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110056..110313,110853..110905,111790..111828,112226..112298,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119997))
location: region:110056-119997:-1
so has part: feature:119921-119997:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110056-110313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119921-119997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119538-119561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110056-110313:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005061335.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110057..110313,110853..110905,111790..111828,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,120149..120181,120301..120324,120684..120818))
location: region:110057-120818:-1
so has part: feature:120684-120818:-1:exon
so has part: feature:120301-120324:-1:exon
so has part: feature:120149-120181:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110057-110313:-1:exon

position:110057:-1
position: 110057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120684-120818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120301-120324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120149-120181:-1:exon

position:120149:-1
position: 120149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120181:-1
position: 120181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110057-110313:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016304979.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110057..110313,110853..110905,111790..111828,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119964,120728..120810))
location: region:110057-120810:-1
so has part: feature:120728-120810:-1:exon
so has part: feature:119921-119964:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110057-110313:-1:exon

position:120810:-1
position: 120810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120728-120810:-1:exon

position:120728:-1
position: 120728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:119921-119964:-1:exon

position:119964:-1
position: 119964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:119538-119561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:110057-110313:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005061338.2
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110057..110313,110853..110905,111790..111828,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119997))
location: region:110057-119997:-1
so has part: feature:119921-119997:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110057-110313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:119921-119997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119538-119561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110057-110313:-1:exon

PCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PCBP2
product: poly(rC) binding protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016304980.1
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110059..110313,110853..110905,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119997))
location: region:110059-119997:-1
so has part: feature:119921-119997:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110059-110313:-1:exon

position:110059:-1
position: 110059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119921-119997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119538-119561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110059-110313:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X2
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVR
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110140..110313,110853..110905,111790..111828,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119964,120728..120752))
location: region:110140-120752:-1
so has part: feature:120728-120752:-1:exon
so has part: feature:119921-119964:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110140-110313:-1:exon

XP_016160465.1
type: Protein
SIO_000068: ncbiprotein

position:110140:-1
position: 110140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120752:-1
position: 120752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120728-120752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119921-119964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119538-119561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:110140-110313:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X4
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVR
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110140..110313,110853..110905,111790..111828,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,120301..120324,120684..120752))
location: region:110140-120752:-1
so has part: feature:120684-120752:-1:exon
so has part: feature:120301-120324:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110140-110313:-1:exon

XP_005061391.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120684-120752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120301-120324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110140-110313:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X3
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVR
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110140..110313,110853..110905,111790..111828,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,120149..120181,120301..120324,120684..120752))
location: region:110140-120752:-1
so has part: feature:120684-120752:-1:exon
so has part: feature:120301-120324:-1:exon
so has part: feature:120149-120181:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110140-110313:-1:exon

XP_005061392.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120684-120752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120301-120324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120149-120181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110140-110313:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X7
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVR
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110140..110313,110853..110905,111790..111828,112226..112298,113584..113625,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119989))
location: region:110140-119989:-1
so has part: feature:119921-119989:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110140-110313:-1:exon

XP_016160468.1
type: Protein
SIO_000068: ncbiprotein

position:119989:-1
position: 119989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:119921-119989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119538-119561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110140-110313:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X6
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQELTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVR
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110140..110313,110853..110905,111790..111828,112226..112298,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119989))
location: region:110140-119989:-1
so has part: feature:119921-119989:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110140-110313:-1:exon

XP_016160467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119921-119989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119538-119561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110140-110313:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X5
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVR
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110140..110313,110853..110905,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119989))
location: region:110140-119989:-1
so has part: feature:119921-119989:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110140-110313:-1:exon

XP_016160466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119921-119989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119538-119561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110140-110313:-1:exon

PCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(rC)-binding protein 2 isoform X1
translation: MDTGVIEGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVDSSSPEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVR
SIO_010081: PCBP2
subclass of: SO_0000673
so part of: PCBP2
location: complement(join(110140..110313,110853..110905,111790..111828,112226..112298,113584..113625,114570..114656,116177..116251,116734..116862,117423..117554,118696..118812,119386..119418,119538..119561,119921..119989))
location: region:110140-119989:-1
so has part: feature:119921-119989:-1:exon
so has part: feature:119538-119561:-1:exon
so has part: feature:119386-119418:-1:exon
so has part: feature:118696-118812:-1:exon
so has part: feature:117423-117554:-1:exon
so has part: feature:116734-116862:-1:exon
so has part: feature:116177-116251:-1:exon
so has part: feature:114570-114656:-1:exon
so has part: feature:113584-113625:-1:exon
so has part: feature:112226-112298:-1:exon
so has part: feature:111790-111828:-1:exon
so has part: feature:110853-110905:-1:exon
so has part: feature:110140-110313:-1:exon

XP_005061395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:119921-119989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119538-119561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119386-119418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118696-118812:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117423-117554:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:116734-116862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116177-116251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114570-114656:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113584-113625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112226-112298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111790-111828:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110853-110905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110140-110313:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 133606..138605
location: region:133606-138605:1
so has part: feature:133606-138605:1:region

position:133606:1
position: 133606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138605:1
position: 138605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133606-138605:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 213594..218593
location: region:213594-218593:1
so has part: feature:213594-218593:1:region

position:213594:1
position: 213594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218593:1
position: 218593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213594-218593:1:region

LOC101808059
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101808059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(230505..291952)
location: region:230505-291952:-1
so has part: feature:230505-291952:-1:exon
subclass of: SO_0000010

101808059
type: Gene
SIO_000068: ncbigene

position:230505:-1
position: 230505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291952:-1
position: 291952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230505-291952:-1:exon

LOC101808059
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101808059
product: sodium channel protein type 8 subunit alpha-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304925.1
SIO_010081: LOC101808059
subclass of: SO_0000673
so part of: LOC101808059
location: complement(join(230505..230845,230966..232046,232419..232450,234092..234196,238854..238991,239732..239785,240785..241069,246323..246445,255015..255188,256033..256187,258119..258236,260634..261104,264109..264465,265363..265536,266225..266463,270934..271069,276065..276453,277562..277849,278277..278483,279122..279263,279947..280010,280398..280619,284417..284508,290206..290334,291876..291952))
location: region:230505-291952:-1
so has part: feature:291876-291952:-1:exon
so has part: feature:290206-290334:-1:exon
so has part: feature:284417-284508:-1:exon
so has part: feature:280398-280619:-1:exon
so has part: feature:279947-280010:-1:exon
so has part: feature:279122-279263:-1:exon
so has part: feature:278277-278483:-1:exon
so has part: feature:277562-277849:-1:exon
so has part: feature:276065-276453:-1:exon
so has part: feature:270934-271069:-1:exon
so has part: feature:266225-266463:-1:exon
so has part: feature:265363-265536:-1:exon
so has part: feature:264109-264465:-1:exon
so has part: feature:260634-261104:-1:exon
so has part: feature:258119-258236:-1:exon
so has part: feature:256033-256187:-1:exon
so has part: feature:255015-255188:-1:exon
so has part: feature:246323-246445:-1:exon
so has part: feature:240785-241069:-1:exon
so has part: feature:239732-239785:-1:exon
so has part: feature:238854-238991:-1:exon
so has part: feature:234092-234196:-1:exon
so has part: feature:232419-232450:-1:exon
so has part: feature:230966-232046:-1:exon
so has part: feature:230505-230845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291876-291952:-1:exon

position:291876:-1
position: 291876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:290206-290334:-1:exon

position:290206:-1
position: 290206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290334:-1
position: 290334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284417-284508:-1:exon

position:284417:-1
position: 284417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284508:-1
position: 284508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:280398-280619:-1:exon

position:280398:-1
position: 280398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280619:-1
position: 280619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279947-280010:-1:exon

position:279947:-1
position: 279947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280010:-1
position: 280010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:279122-279263:-1:exon

position:279122:-1
position: 279122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279263:-1
position: 279263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:278277-278483:-1:exon

position:278277:-1
position: 278277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278483:-1
position: 278483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:277562-277849:-1:exon

position:277562:-1
position: 277562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277849:-1
position: 277849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:276065-276453:-1:exon

position:276065:-1
position: 276065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276453:-1
position: 276453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:270934-271069:-1:exon

position:270934:-1
position: 270934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271069:-1
position: 271069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:266225-266463:-1:exon

position:266225:-1
position: 266225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266463:-1
position: 266463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:265363-265536:-1:exon

position:265363:-1
position: 265363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265536:-1
position: 265536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:264109-264465:-1:exon

position:264109:-1
position: 264109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264465:-1
position: 264465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:260634-261104:-1:exon

position:260634:-1
position: 260634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261104:-1
position: 261104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:258119-258236:-1:exon

position:258119:-1
position: 258119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258236:-1
position: 258236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:256033-256187:-1:exon

position:256033:-1
position: 256033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256187:-1
position: 256187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:255015-255188:-1:exon

position:255015:-1
position: 255015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255188:-1
position: 255188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:246323-246445:-1:exon

position:246323:-1
position: 246323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246445:-1
position: 246445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:240785-241069:-1:exon

position:240785:-1
position: 240785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241069:-1
position: 241069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:239732-239785:-1:exon

position:239732:-1
position: 239732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239785:-1
position: 239785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:238854-238991:-1:exon

position:238854:-1
position: 238854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238991:-1
position: 238991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:234092-234196:-1:exon

position:234092:-1
position: 234092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234196:-1
position: 234196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:232419-232450:-1:exon

position:232419:-1
position: 232419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232450:-1
position: 232450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:230966-232046:-1:exon

position:230966:-1
position: 230966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232046:-1
position: 232046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:230505-230845:-1:exon

position:230845:-1
position: 230845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101808059
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101808059
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sodium channel protein type 8 subunit alpha-like
translation: MHQRGRSVKESNFFKFQFLPLLPLGLYTFTGIYTFESLVKIIARGFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGDEKCDNEKVFKSESEDGMRRKAFRLPDNRLGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPVSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGWGGGGGGSGYSGYSQGSRSSRIFPALRRSLKRNSTVDCNGVVSLIGGPPSSMPGGRILPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWSKAKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDFQKNGNGTTSGIGSSVEKYIIDEEHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDESSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEHRFEIDVVNNKTQCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLDSEVLFDIWEDSSPSLVSCPRHRDQSCPSGGFTCMKKIPQKTQPVPHPSPGSEQAAPPAPPLSHCCLSPPGMFLAEIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSADSTLRAYRARLARRGFVGRRAAAAKLENGAANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERKRQRQEHKC
SIO_010081: LOC101808059
subclass of: SO_0000673
so part of: LOC101808059
location: complement(join(230609..230845,230966..232046,232419..232450,234092..234196,238854..238991,239732..239785,240785..241069,246323..246445,255015..255188,256033..256187,258119..258236,260634..261104,264109..264465,265363..265536,266225..266463,270934..271069,276065..276453,277562..277849,278277..278483,279122..279263,279947..280010,280398..280619,284417..284508,290206..290334,291876..291952))
location: region:230609-291952:-1
so has part: feature:291876-291952:-1:exon
so has part: feature:290206-290334:-1:exon
so has part: feature:284417-284508:-1:exon
so has part: feature:280398-280619:-1:exon
so has part: feature:279947-280010:-1:exon
so has part: feature:279122-279263:-1:exon
so has part: feature:278277-278483:-1:exon
so has part: feature:277562-277849:-1:exon
so has part: feature:276065-276453:-1:exon
so has part: feature:270934-271069:-1:exon
so has part: feature:266225-266463:-1:exon
so has part: feature:265363-265536:-1:exon
so has part: feature:264109-264465:-1:exon
so has part: feature:260634-261104:-1:exon
so has part: feature:258119-258236:-1:exon
so has part: feature:256033-256187:-1:exon
so has part: feature:255015-255188:-1:exon
so has part: feature:246323-246445:-1:exon
so has part: feature:240785-241069:-1:exon
so has part: feature:239732-239785:-1:exon
so has part: feature:238854-238991:-1:exon
so has part: feature:234092-234196:-1:exon
so has part: feature:232419-232450:-1:exon
so has part: feature:230966-232046:-1:exon
so has part: feature:230609-230845:-1:exon

XP_016160411.1
type: Protein
SIO_000068: ncbiprotein

position:230609:-1
position: 230609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291876-291952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:290206-290334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284417-284508:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280398-280619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279947-280010:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279122-279263:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278277-278483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277562-277849:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276065-276453:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:270934-271069:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:266225-266463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265363-265536:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:264109-264465:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:260634-261104:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:258119-258236:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:256033-256187:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:255015-255188:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:246323-246445:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:240785-241069:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:239732-239785:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:238854-238991:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:234092-234196:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:232419-232450:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:230966-232046:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:230609-230845:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 292122..297121
location: region:292122-297121:1
so has part: feature:292122-297121:1:region

position:292122:1
position: 292122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297121:1
position: 297121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292122-297121:1:region

SUOX
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SUOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <299223..305026
location: region:299223-305026:1
so has part: feature:299223-305026:1:exon
subclass of: SO_0000010

101808243
type: Gene
SIO_000068: ncbigene

position:299223:1
position: 299223
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:305026:1
position: 305026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299223-305026:1:exon

SUOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SUOX
product: sulfite oxidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304926.1
SIO_010081: SUOX
subclass of: SO_0000673
so part of: SUOX
location: join(<299223..299777,299818..299881,304090..305026)
location: region:299223-305026:1
so has part: feature:299223-299777:1:exon
so has part: feature:299818-299881:1:exon
so has part: feature:304090-305026:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299223-299777:1:exon

position:299777:1
position: 299777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299818-299881:1:exon

position:299818:1
position: 299818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299881:1
position: 299881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:304090-305026:1:exon

position:304090:1
position: 304090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SUOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfite oxidase, mitochondrial
translation: PPFAGDPPRHPALRVNSLKPFNAEPPPELLTQSFLTPNELFFTRNHLPVPAVDPGSYRLRVEGPGGRSLSLSLAELRQRFPKHEVIATLQCAGNRRSEMSRVRPVKGLAWDIGAISTARWGGARLRDVLLAAGLGDKTGDDGEWHVCFEGLDADASGTPYGASIPLKRALSAEAEVLLAYEMNGQELPRDHGFPVRVLVPGVVGARNWGRGAHLEPARGAEQRLAPRAHHRHPLRDRGDITGVLGTWGHRDTGDTGDVAPIWNLRGVLSNAWHRVPVTVTR
SIO_010081: SUOX
subclass of: SO_0000673
so part of: SUOX
location: join(<299223..299777,299818..299881,304090..304316)
location: region:299223-304316:1
so has part: feature:299223-299777:1:exon
so has part: feature:299818-299881:1:exon
so has part: feature:304090-304316:1:exon

XP_016160412.1
type: Protein
SIO_000068: ncbiprotein

position:304316:1
position: 304316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299223-299777:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299818-299881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304090-304316:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 368139..373138
location: region:368139-373138:1
so has part: feature:368139-373138:1:region

position:368139:1
position: 368139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373138:1
position: 373138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:368139-373138:1:region

ERBB3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ERBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 373757..391072
location: region:373757-391072:1
so has part: feature:373757-391072:1:exon
subclass of: SO_0000010

101808649
type: Gene
SIO_000068: ncbigene

position:373757:1
position: 373757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391072:1
position: 391072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373757-391072:1:exon

ERBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ERBB3
product: erb-b2 receptor tyrosine kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 49% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061349.1
SIO_010081: ERBB3
subclass of: SO_0000673
so part of: ERBB3
location: join(373757..373897,373956..374123,375074..375260,376967..377092,377252..377321,387578..387719,389750..389852,390896..391007,391060..391072)
location: region:373757-391072:1
so has part: feature:373757-373897:1:exon
so has part: feature:373956-374123:1:exon
so has part: feature:375074-375260:1:exon
so has part: feature:376967-377092:1:exon
so has part: feature:377252-377321:1:exon
so has part: feature:387578-387719:1:exon
so has part: feature:389750-389852:1:exon
so has part: feature:390896-391007:1:exon
so has part: feature:391060-391072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373757-373897:1:exon

position:373897:1
position: 373897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373956-374123:1:exon

position:373956:1
position: 373956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374123:1
position: 374123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:375074-375260:1:exon

position:375074:1
position: 375074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375260:1
position: 375260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:376967-377092:1:exon

position:376967:1
position: 376967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377092:1
position: 377092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:377252-377321:1:exon

position:377252:1
position: 377252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377321:1
position: 377321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:387578-387719:1:exon

position:387578:1
position: 387578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387719:1
position: 387719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:389750-389852:1:exon

position:389750:1
position: 389750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389852:1
position: 389852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:390896-391007:1:exon

position:390896:1
position: 390896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391007:1
position: 391007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:391060-391072:1:exon

position:391060:1
position: 391060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ERBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor tyrosine-protein kinase erbB-3
translation: MVAMVAVAAMVAMVAPVALMTLVAVMVAMVAMVAVAAMVALVTLVAPPWLPAVCAGTLNGLSVTGDAQHQYQTLHKMYNNCEIVMGNLEIVLIDHSQDLSFLQTIREVTGYILIAMNVFAALPLQNLRVIRGTQFYEERFALFVLLNYNPNNTQALRQLRLHQLTEILAGGVYIEKNAQLCHVDTVEWRDIMRDTRLEPLVRDNGHGCAPCHESCGGHCWGPGPEDCQKCGRAPTLIAVMVVGAVFLSCSLVLLALLYWRGKKIQKKRAMRRYLERGEGIWIPDGDSIKIPVSIKVIQDWSGQQSFHAVTDVSVPLVLWVGLGVFQVSPRIPGCSGDAPGMFQVPPWTRGVSP
SIO_010081: ERBB3
subclass of: SO_0000673
so part of: ERBB3
location: join(373757..373897,373956..374123,375074..375260,376967..377092,377252..377321,387578..387719,389750..389852,390896..391007,391060..391072)
location: region:373757-391072:1
so has part: feature:373757-373897:1:exon
so has part: feature:373956-374123:1:exon
so has part: feature:375074-375260:1:exon
so has part: feature:376967-377092:1:exon
so has part: feature:377252-377321:1:exon
so has part: feature:387578-387719:1:exon
so has part: feature:389750-389852:1:exon
so has part: feature:390896-391007:1:exon
so has part: feature:391060-391072:1:exon

XP_005061406.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373757-373897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:373956-374123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:375074-375260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:376967-377092:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377252-377321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387578-387719:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389750-389852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:390896-391007:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391060-391072:1:exon

PA2G4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PA2G4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 395458..423309
location: region:395458-423309:1
so has part: feature:395458-423309:1:exon
subclass of: SO_0000010

101808446
type: Gene
SIO_000068: ncbigene

position:395458:1
position: 395458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423309:1
position: 423309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395458-423309:1:exon

PA2G4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PA2G4
product: proliferation-associated 2G4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304928.1
SIO_010081: PA2G4
subclass of: SO_0000673
so part of: PA2G4
location: join(395458..395610,397595..397637,404604..404717,405121..405226,405473..405686,405809..405848,406810..406863,415637..415745,417027..417105,417199..417332,418845..418939,419707..419834,422981..423034,423133..423309)
location: region:395458-423309:1
so has part: feature:395458-395610:1:exon
so has part: feature:397595-397637:1:exon
so has part: feature:404604-404717:1:exon
so has part: feature:405121-405226:1:exon
so has part: feature:405473-405686:1:exon
so has part: feature:405809-405848:1:exon
so has part: feature:406810-406863:1:exon
so has part: feature:415637-415745:1:exon
so has part: feature:417027-417105:1:exon
so has part: feature:417199-417332:1:exon
so has part: feature:418845-418939:1:exon
so has part: feature:419707-419834:1:exon
so has part: feature:422981-423034:1:exon
so has part: feature:423133-423309:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:395458-395610:1:exon

position:395610:1
position: 395610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:397595-397637:1:exon

position:397595:1
position: 397595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397637:1
position: 397637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:404604-404717:1:exon

position:404604:1
position: 404604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404717:1
position: 404717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405121-405226:1:exon

position:405121:1
position: 405121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405226:1
position: 405226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:405473-405686:1:exon

position:405473:1
position: 405473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405686:1
position: 405686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:405809-405848:1:exon

position:405809:1
position: 405809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405848:1
position: 405848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:406810-406863:1:exon

position:406810:1
position: 406810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406863:1
position: 406863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:415637-415745:1:exon

position:415637:1
position: 415637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415745:1
position: 415745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:417027-417105:1:exon

position:417027:1
position: 417027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417105:1
position: 417105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:417199-417332:1:exon

position:417199:1
position: 417199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417332:1
position: 417332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:418845-418939:1:exon

position:418845:1
position: 418845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418939:1
position: 418939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:419707-419834:1:exon

position:419707:1
position: 419707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419834:1
position: 419834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:422981-423034:1:exon

position:422981:1
position: 422981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423034:1
position: 423034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:423133-423309:1:exon

position:423133:1
position: 423133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PA2G4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PA2G4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proliferation-associated protein 2G4
translation: MYYLEEHRMVHRNLAARNVLLKSPSQVQVADFGIADLLYPDDKKYFYNEVKPHICTIDVYMVMVKSLEVANPGASVLCLCEKGDAMIMEETGKIFKKEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKDGDLVKIDLGVHVDGFIANVAHTFVLGASKVGLSSGGVCSGWGGLRGPGHGLEPLELRWHHPEPLELRWHQSGVSGSEVAVPWSVRIQGGTIPVPVLGGLTGGRGEHRGVHPSNPSLPAGMLSHQLKQHVIDGEKTIIQNPSDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFFSEVERRFDTMPFTLRALEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLLMPNGPMRITSGPFEPELYKSDLEVQDGELKALLQSSASRKTQKKKKKKASKNAENATTGETAEENEAGD
SIO_010081: PA2G4
subclass of: SO_0000673
so part of: PA2G4
location: join(395458..395610,397595..397637,404604..404717,405121..405226,405473..405686,405809..405848,406810..406863,415637..415745,417027..417105,417199..417332,418845..418939,419707..419834,422981..423034,423133..423198)
location: region:395458-423198:1
so has part: feature:395458-395610:1:exon
so has part: feature:397595-397637:1:exon
so has part: feature:404604-404717:1:exon
so has part: feature:405121-405226:1:exon
so has part: feature:405473-405686:1:exon
so has part: feature:405809-405848:1:exon
so has part: feature:406810-406863:1:exon
so has part: feature:415637-415745:1:exon
so has part: feature:417027-417105:1:exon
so has part: feature:417199-417332:1:exon
so has part: feature:418845-418939:1:exon
so has part: feature:419707-419834:1:exon
so has part: feature:422981-423034:1:exon
so has part: feature:423133-423198:1:exon

XP_016160414.1
type: Protein
SIO_000068: ncbiprotein

position:423198:1
position: 423198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:395458-395610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397595-397637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:404604-404717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405121-405226:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:405473-405686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405809-405848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406810-406863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:415637-415745:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:417027-417105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:417199-417332:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:418845-418939:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:419707-419834:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:422981-423034:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:423133-423198:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 423419..428418
location: region:423419-428418:1
so has part: feature:423419-428418:1:region

position:423419:1
position: 423419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428418:1
position: 428418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423419-428418:1:region

ZC3H10
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ZC3H10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <438438..454633
location: region:438438-454633:1
so has part: feature:438438-454633:1:exon
subclass of: SO_0000010

101808829
type: Gene
SIO_000068: ncbigene

position:438438:1
position: 438438
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:454633:1
position: 454633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438438-454633:1:exon

ZC3H10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZC3H10
product: zinc finger CCCH-type containing 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304929.1
SIO_010081: ZC3H10
subclass of: SO_0000673
so part of: ZC3H10
location: join(<438438..438836,438883..439089,445511..445627,454628..454633)
location: region:438438-454633:1
so has part: feature:438438-438836:1:exon
so has part: feature:438883-439089:1:exon
so has part: feature:445511-445627:1:exon
so has part: feature:454628-454633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438438-438836:1:exon

position:438836:1
position: 438836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:438883-439089:1:exon

position:438883:1
position: 438883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439089:1
position: 439089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445511-445627:1:exon

position:445511:1
position: 445511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445627:1
position: 445627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:454628-454633:1:exon

position:454628:1
position: 454628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZC3H10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZC3H10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 10
translation: CRFRHPDISEVTNLGVRKNEFIFCHDFQNKECVRLNCRFIHGTKEDEDCYKKTGELPPRLRQKVAAGLGLSPADLPNSKEEVPICRDFLKGDCQRGAKCKFQHLQRDYEYEARGREQGRRYEPYDGLYDPDEPPVLKRRRAEGLYESYEYGFASPRAVEYRLLEEENVLLRKRVEDLKKQVNNLLATNEVLLEQNAQFRNQGLLAQAWPFLGQFLEKLLRDSVAPSVRALSPHLQSFAFTRD
SIO_010081: ZC3H10
subclass of: SO_0000673
so part of: ZC3H10
location: join(<438438..438836,438883..439089,445511..445627,454628..454633)
location: region:438438-454633:1
so has part: feature:438438-438836:1:exon
so has part: feature:438883-439089:1:exon
so has part: feature:445511-445627:1:exon
so has part: feature:454628-454633:1:exon

XP_016160415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:438438-438836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:438883-439089:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445511-445627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:454628-454633:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 445644..450643
location: region:445644-450643:1
so has part: feature:445644-450643:1:region

position:445644:1
position: 445644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450643:1
position: 450643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445644-450643:1:region

RNF41
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RNF41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(485362..513064)
location: region:485362-513064:-1
so has part: feature:485362-513064:-1:exon
subclass of: SO_0000010

101809022
type: Gene
SIO_000068: ncbigene

position:485362:-1
position: 485362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513064:-1
position: 513064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485362-513064:-1:exon

RNF41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RNF41
product: ring finger protein 41
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061351.2
SIO_010081: RNF41
subclass of: SO_0000673
so part of: RNF41
location: complement(join(485362..485528,487553..487913,506805..506989,508747..508758,512956..513064))
location: region:485362-513064:-1
so has part: feature:512956-513064:-1:exon
so has part: feature:508747-508758:-1:exon
so has part: feature:506805-506989:-1:exon
so has part: feature:487553-487913:-1:exon
so has part: feature:485362-485528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512956-513064:-1:exon

position:512956:-1
position: 512956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508747-508758:-1:exon

position:508747:-1
position: 508747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508758:-1
position: 508758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:506805-506989:-1:exon

position:506805:-1
position: 506805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506989:-1
position: 506989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:487553-487913:-1:exon

position:487553:-1
position: 487553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487913:-1
position: 487913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:485362-485528:-1:exon

position:485528:-1
position: 485528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RNF41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase NRDP1
translation: MGYDVARFQGDVDEDLICPICSGVLEEPVQVRHTWAHLGTPGHTWASVMAWTRWEGAQIPPGEVQDRHQKEFFHGKGDHAQGGLEEEKENPHLLPEFSPNLALSISHTWISSGKCKFLLIWSLQFFPSLEMPKDELPNHNCIKHLRSVVQQQQTRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQNLEETIEYNEILE
SIO_010081: RNF41
subclass of: SO_0000673
so part of: RNF41
location: complement(join(485421..485528,487553..487913,506805..506962))
location: region:485421-506962:-1
so has part: feature:506805-506962:-1:exon
so has part: feature:487553-487913:-1:exon
so has part: feature:485421-485528:-1:exon

XP_005061408.2
type: Protein
SIO_000068: ncbiprotein

position:485421:-1
position: 485421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506962:-1
position: 506962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506805-506962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:487553-487913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485421-485528:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 499019..504018
location: region:499019-504018:1
so has part: feature:499019-504018:1:region

position:499019:1
position: 499019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504018:1
position: 504018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499019-504018:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 527573..532572
location: region:527573-532572:1
so has part: feature:527573-532572:1:region

position:527573:1
position: 527573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532572:1
position: 532572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527573-532572:1:region

ANKRD52
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ANKRD52
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(533171..567839)
location: region:533171-567839:-1
so has part: feature:533171-567839:-1:exon
subclass of: SO_0000010

101805767
type: Gene
SIO_000068: ncbigene

position:533171:-1
position: 533171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567839:-1
position: 567839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533171-567839:-1:exon

ANKRD52
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ANKRD52
product: ankyrin repeat domain 52
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304930.1
SIO_010081: ANKRD52
subclass of: SO_0000673
so part of: ANKRD52
location: complement(join(533171..533862,535458..535659,537106..537177,539970..540081,540896..540964,542198..542338,545386..545454,546872..546989,547910..547992,548686..548705,549908..549937,551219..551374,552164..552376,552873..553143,554886..554890,555348..555524,558271..558341,558981..559059,561601..561711,563883..563933,567651..567839))
location: region:533171-567839:-1
so has part: feature:567651-567839:-1:exon
so has part: feature:563883-563933:-1:exon
so has part: feature:561601-561711:-1:exon
so has part: feature:558981-559059:-1:exon
so has part: feature:558271-558341:-1:exon
so has part: feature:555348-555524:-1:exon
so has part: feature:554886-554890:-1:exon
so has part: feature:552873-553143:-1:exon
so has part: feature:552164-552376:-1:exon
so has part: feature:551219-551374:-1:exon
so has part: feature:549908-549937:-1:exon
so has part: feature:548686-548705:-1:exon
so has part: feature:547910-547992:-1:exon
so has part: feature:546872-546989:-1:exon
so has part: feature:545386-545454:-1:exon
so has part: feature:542198-542338:-1:exon
so has part: feature:540896-540964:-1:exon
so has part: feature:539970-540081:-1:exon
so has part: feature:537106-537177:-1:exon
so has part: feature:535458-535659:-1:exon
so has part: feature:533171-533862:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:567651-567839:-1:exon

position:567651:-1
position: 567651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563883-563933:-1:exon

position:563883:-1
position: 563883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563933:-1
position: 563933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:561601-561711:-1:exon

position:561601:-1
position: 561601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561711:-1
position: 561711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:558981-559059:-1:exon

position:558981:-1
position: 558981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559059:-1
position: 559059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:558271-558341:-1:exon

position:558271:-1
position: 558271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558341:-1
position: 558341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:555348-555524:-1:exon

position:555348:-1
position: 555348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555524:-1
position: 555524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:554886-554890:-1:exon

position:554886:-1
position: 554886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554890:-1
position: 554890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:552873-553143:-1:exon

position:552873:-1
position: 552873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553143:-1
position: 553143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:552164-552376:-1:exon

position:552164:-1
position: 552164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552376:-1
position: 552376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:551219-551374:-1:exon

position:551219:-1
position: 551219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551374:-1
position: 551374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:549908-549937:-1:exon

position:549908:-1
position: 549908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549937:-1
position: 549937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:548686-548705:-1:exon

position:548686:-1
position: 548686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548705:-1
position: 548705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:547910-547992:-1:exon

position:547910:-1
position: 547910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547992:-1
position: 547992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:546872-546989:-1:exon

position:546872:-1
position: 546872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546989:-1
position: 546989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:545386-545454:-1:exon

position:545386:-1
position: 545386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545454:-1
position: 545454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:542198-542338:-1:exon

position:542198:-1
position: 542198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542338:-1
position: 542338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:540896-540964:-1:exon

position:540896:-1
position: 540896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540964:-1
position: 540964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:539970-540081:-1:exon

position:539970:-1
position: 539970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540081:-1
position: 540081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:537106-537177:-1:exon

position:537106:-1
position: 537106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537177:-1
position: 537177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:535458-535659:-1:exon

position:535458:-1
position: 535458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535659:-1
position: 535659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:533171-533862:-1:exon

position:533862:-1
position: 533862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD52
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ANKRD52
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(549914..549916),aa:OTHER)
product: LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
translation: MGNVVRAGVAVAQGPGLNRDQPGPTGTAPPGAARGWAQAQGAPGPVSHVCPRSVGLERDGDPPDRGLPLLPFCPPSRVLGSLSPLLSLQPPLVQAIFNRDVEEVRSLLSQKENINVLDQERRTPLHAAAYIGDVAILELLILSGANVNAKDTVWLTPLHRAAASRHEKALHLLLKHSADVNARDKHWQTPLHVAAANRATKCVEALVPLLSTVNVADRTGRTALFDSRVTVLAVFTVSLSRCHCPGCIHGVTVPLSLPRCSFRCPVPLSPGHLEVLKLLLARGADVLCKDRKGYTLLHTAAASGQIEVVRHLLRLGVEIDEPNAFGNTALHIACYMGQDAVATELVNVGANVNQPNERGFTPLHFAAVSTNGALCLEILVNNGADVNFQSKEGKSPLHMAAIHGRFTRSQILIQNGQCGNPGNFGNVGNPGNVGNPGNFGNKMLSNNNXTSGAETGPGRGIHDMFPLHLAVLFGFSDCCRKLLSSGQLYSIVSSLSNEHVLSAGFDINTPDSLGRTCLHAAASGGNVECLNLLLSSGADLRRRDKFGRTPLHYAAANGSYQCTVTLLTAGAAVNEADGKGCTALHYAAASDTYRRAEPHAGSSDEEPLKESRLKEAFFCLEFLLDNGADPSLRDKQGYTAVHYAAAYGNRQNLELLLEMSFNCLEDVESTVPVSPLHLAAYNGHCEALKALAETLVNLDVRDHKGRTALYLATERGSSDCVQVLTSHGASALVKERKRKWTPLHAAAANGNTDSLHLLIDSGERADITDVMDIHGQ
SIO_010081: ANKRD52
subclass of: SO_0000673
so part of: ANKRD52
location: complement(join(533771..533862,535458..535659,537106..537177,539970..540081,540896..540964,542198..542338,545386..545454,546872..546989,547910..547992,548686..548705,549908..549937,551219..551374,552164..552376,552873..553143,554886..554890,555348..555524,558271..558341,558981..559059,561601..561711,563883..563933,567651..567839))
location: region:533771-567839:-1
so has part: feature:567651-567839:-1:exon
so has part: feature:563883-563933:-1:exon
so has part: feature:561601-561711:-1:exon
so has part: feature:558981-559059:-1:exon
so has part: feature:558271-558341:-1:exon
so has part: feature:555348-555524:-1:exon
so has part: feature:554886-554890:-1:exon
so has part: feature:552873-553143:-1:exon
so has part: feature:552164-552376:-1:exon
so has part: feature:551219-551374:-1:exon
so has part: feature:549908-549937:-1:exon
so has part: feature:548686-548705:-1:exon
so has part: feature:547910-547992:-1:exon
so has part: feature:546872-546989:-1:exon
so has part: feature:545386-545454:-1:exon
so has part: feature:542198-542338:-1:exon
so has part: feature:540896-540964:-1:exon
so has part: feature:539970-540081:-1:exon
so has part: feature:537106-537177:-1:exon
so has part: feature:535458-535659:-1:exon
so has part: feature:533771-533862:-1:exon

XP_016160416.1
type: Protein
SIO_000068: ncbiprotein

position:533771:-1
position: 533771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567651-567839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563883-563933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:561601-561711:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558981-559059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558271-558341:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555348-555524:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:554886-554890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:552873-553143:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:552164-552376:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:551219-551374:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:549908-549937:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:548686-548705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:547910-547992:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:546872-546989:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:545386-545454:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:542198-542338:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:540896-540964:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:539970-540081:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:537106-537177:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:535458-535659:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:533771-533862:-1:exon

COQ10A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: COQ10A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 573197..574416
location: region:573197-574416:1
so has part: feature:573197-574416:1:exon
subclass of: SO_0000010

101822025
type: Gene
SIO_000068: ncbigene

position:573197:1
position: 573197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574416:1
position: 574416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573197-574416:1:exon

COQ10A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: COQ10A
product: coenzyme Q10A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016304965.1
SIO_010081: COQ10A
subclass of: SO_0000673
so part of: COQ10A
location: join(573197..573384,573888..573989,574069..574416)
location: region:573197-574416:1
so has part: feature:573197-573384:1:exon
so has part: feature:573888-573989:1:exon
so has part: feature:574069-574416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573197-573384:1:exon

position:573384:1
position: 573384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:573888-573989:1:exon

position:573888:1
position: 573888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573989:1
position: 573989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:574069-574416:1:exon

position:574069:1
position: 574069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COQ10A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: COQ10A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coenzyme Q-binding protein COQ10 homolog A, mitochondrial
translation: MQEMYDVVANVEDYKNFVPWCKKSVVVARRAGHVKAQLEVGFPPVLERYTSIVTLVQPHLVKAVCTDGRLFNHLETNWRFSPGIPGYPRTSTVDFSISFEFRSLLHSQLATMFFDEVVKQMVAAFERRAAKNFGPETRIPRELMFHEVHQT
SIO_010081: COQ10A
subclass of: SO_0000673
so part of: COQ10A
location: join(573199..573384,573888..573989,574069..574236)
location: region:573199-574236:1
so has part: feature:573199-573384:1:exon
so has part: feature:573888-573989:1:exon
so has part: feature:574069-574236:1:exon

XP_016160451.1
type: Protein
SIO_000068: ncbiprotein

position:573199:1
position: 573199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:574236:1
position: 574236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573199-573384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:573888-573989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574069-574236:1:exon

CS
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(576070..580975)
location: region:576070-580975:-1
so has part: feature:576070-580975:-1:exon
subclass of: SO_0000010

101821830
type: Gene
SIO_000068: ncbigene

position:576070:-1
position: 576070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580975:-1
position: 580975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576070-580975:-1:exon

CS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CS
product: citrate synthase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016304960.1
SIO_010081: CS
subclass of: SO_0000673
so part of: CS
location: complement(join(576070..576262,576846..577055,577246..577347,577909..578038,578233..578432,578602..578790,578876..579007,579344..579409,580278..580385,580882..580975))
location: region:576070-580975:-1
so has part: feature:580882-580975:-1:exon
so has part: feature:580278-580385:-1:exon
so has part: feature:579344-579409:-1:exon
so has part: feature:578876-579007:-1:exon
so has part: feature:578602-578790:-1:exon
so has part: feature:578233-578432:-1:exon
so has part: feature:577909-578038:-1:exon
so has part: feature:577246-577347:-1:exon
so has part: feature:576846-577055:-1:exon
so has part: feature:576070-576262:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580882-580975:-1:exon

position:580882:-1
position: 580882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580278-580385:-1:exon

position:580278:-1
position: 580278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580385:-1
position: 580385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:579344-579409:-1:exon

position:579344:-1
position: 579344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579409:-1
position: 579409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:578876-579007:-1:exon

position:578876:-1
position: 578876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579007:-1
position: 579007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:578602-578790:-1:exon

position:578602:-1
position: 578602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578790:-1
position: 578790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:578233-578432:-1:exon

position:578233:-1
position: 578233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578432:-1
position: 578432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:577909-578038:-1:exon

position:577909:-1
position: 577909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578038:-1
position: 578038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:577246-577347:-1:exon

position:577246:-1
position: 577246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577347:-1
position: 577347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:576846-577055:-1:exon

position:576846:-1
position: 576846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577055:-1
position: 577055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:576070-576262:-1:exon

position:576262:-1
position: 576262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CS
product: citrate synthase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016304961.1
SIO_010081: CS
subclass of: SO_0000673
so part of: CS
location: complement(join(576070..576262,576846..577055,577246..577347,577909..578038,578233..578432,578602..578790,578876..579007,579344..579409,580012..580265))
location: region:576070-580265:-1
so has part: feature:580012-580265:-1:exon
so has part: feature:579344-579409:-1:exon
so has part: feature:578876-579007:-1:exon
so has part: feature:578602-578790:-1:exon
so has part: feature:578233-578432:-1:exon
so has part: feature:577909-578038:-1:exon
so has part: feature:577246-577347:-1:exon
so has part: feature:576846-577055:-1:exon
so has part: feature:576070-576262:-1:exon

position:580265:-1
position: 580265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580012-580265:-1:exon

position:580012:-1
position: 580012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:579344-579409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578876-579007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578602-578790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578233-578432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577909-578038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577246-577347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576846-577055:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576070-576262:-1:exon

CS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: citrate synthase, mitochondrial isoform X1
translation: MIPKEQAKIKSFRQQHGNTAIGQITVDMVYGGMRGMKGLIYETSVLDPDEGIRFRGYSIPECQKKLPKAAGGEEPLPEGLFWLLVTGEIPTQEQATWLSREWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSESKFARAYAEGIHRAKYWEFVYEDAMDLIAKLPCVAAKIYRNLYREGSGIGAIDPNLDWSHNFTNMLGYTDPQFIELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLAFAAAMNGLAGPLHGLANQEVLLWLTDLQKELGKDVSDEKLRDFIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPKDPLFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMKEMNYYTVLFGVSRALGVLSQLIWSRALGFPLERPKSMSTKGLMQLVGYKSG
SIO_010081: CS
subclass of: SO_0000673
so part of: CS
location: complement(join(576092..576262,576846..577055,577246..577347,577909..578038,578233..578432,578602..578790,578876..579007,579344..579409,580278..580361))
location: region:576092-580361:-1
so has part: feature:580278-580361:-1:exon
so has part: feature:579344-579409:-1:exon
so has part: feature:578876-579007:-1:exon
so has part: feature:578602-578790:-1:exon
so has part: feature:578233-578432:-1:exon
so has part: feature:577909-578038:-1:exon
so has part: feature:577246-577347:-1:exon
so has part: feature:576846-577055:-1:exon
so has part: feature:576092-576262:-1:exon

XP_016160446.1
type: Protein
SIO_000068: ncbiprotein

position:576092:-1
position: 576092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580361:-1
position: 580361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580278-580361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579344-579409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578876-579007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578602-578790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578233-578432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577909-578038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577246-577347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576846-577055:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576092-576262:-1:exon

CS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: citrate synthase, mitochondrial isoform X2
translation: MGQITVDMVYGGMRGMKGLIYETSVLDPDEGIRFRGYSIPECQKKLPKAAGGEEPLPEGLFWLLVTGEIPTQEQATWLSREWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSESKFARAYAEGIHRAKYWEFVYEDAMDLIAKLPCVAAKIYRNLYREGSGIGAIDPNLDWSHNFTNMLGYTDPQFIELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLAFAAAMNGLAGPLHGLANQEVLLWLTDLQKELGKDVSDEKLRDFIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPKDPLFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMKEMNYYTVLFGVSRALGVLSQLIWSRALGFPLERPKSMSTKGLMQLVGYKSG
SIO_010081: CS
subclass of: SO_0000673
so part of: CS
location: complement(join(576092..576262,576846..577055,577246..577347,577909..578038,578233..578432,578602..578790,578876..579007,579344..579409,580012..580035))
location: region:576092-580035:-1
so has part: feature:580012-580035:-1:exon
so has part: feature:579344-579409:-1:exon
so has part: feature:578876-579007:-1:exon
so has part: feature:578602-578790:-1:exon
so has part: feature:578233-578432:-1:exon
so has part: feature:577909-578038:-1:exon
so has part: feature:577246-577347:-1:exon
so has part: feature:576846-577055:-1:exon
so has part: feature:576092-576262:-1:exon

XP_016160447.1
type: Protein
SIO_000068: ncbiprotein

position:580035:-1
position: 580035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580012-580035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:579344-579409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578876-579007:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578602-578790:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:578233-578432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577909-578038:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577246-577347:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576846-577055:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576092-576262:-1:exon

CNPY2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CNPY2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(584721..588525)
location: region:584721-588525:-1
so has part: feature:584721-588525:-1:exon
subclass of: SO_0000010

101815956
type: Gene
SIO_000068: ncbigene

position:584721:-1
position: 584721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588525:-1
position: 588525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584721-588525:-1:exon

CNPY2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CNPY2
product: canopy FGF signaling regulator 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005061389.2
SIO_010081: CNPY2
subclass of: SO_0000673
so part of: CNPY2
location: complement(join(584721..585033,586321..586417,587255..587452,587592..587707,588079..588525))
location: region:584721-588525:-1
so has part: feature:588079-588525:-1:exon
so has part: feature:587592-587707:-1:exon
so has part: feature:587255-587452:-1:exon
so has part: feature:586321-586417:-1:exon
so has part: feature:584721-585033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588079-588525:-1:exon

position:588079:-1
position: 588079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:587592-587707:-1:exon

position:587592:-1
position: 587592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587707:-1
position: 587707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587255-587452:-1:exon

position:587255:-1
position: 587255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587452:-1
position: 587452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:586321-586417:-1:exon

position:586321:-1
position: 586321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586417:-1
position: 586417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584721-585033:-1:exon

position:585033:-1
position: 585033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNPY2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CNPY2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein canopy homolog 2
translation: MRGRIPGICGALRMRERIPALLGLALALASLLPAAGARRSQDLHCGACRALVDELEWEIAQVDPRKTIQMGSFRINPDGSQSVVAVPYARSEAHLTELLERVCEKMKEYGEKVDPATHRKSYVRVISHDGTKMDLSGLKFDGDVTSSLKFACESIAEEYEDELIEFLSHEAENVKDRLCSKRTDLCDHALHIPHDEL
SIO_010081: CNPY2
subclass of: SO_0000673
so part of: CNPY2
location: complement(join(584990..585033,586321..586417,587255..587452,587592..587707,588079..588217))
location: region:584990-588217:-1
so has part: feature:588079-588217:-1:exon
so has part: feature:587592-587707:-1:exon
so has part: feature:587255-587452:-1:exon
so has part: feature:586321-586417:-1:exon
so has part: feature:584990-585033:-1:exon

XP_005061446.1
type: Protein
SIO_000068: ncbiprotein

position:584990:-1
position: 584990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588217:-1
position: 588217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588079-588217:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:587592-587707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:587255-587452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:586321-586417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584990-585033:-1:exon

PAN2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(588450..607543)
location: region:588450-607543:-1
so has part: feature:588450-607543:-1:exon
subclass of: SO_0000010

101821635
type: Gene
SIO_000068: ncbigene

position:588450:-1
position: 588450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607543:-1
position: 607543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588450-607543:-1:exon

PAN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PAN2
product: PAN2 poly(A) specific ribonuclease subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061418.1
SIO_010081: PAN2
subclass of: SO_0000673
so part of: PAN2
location: complement(join(588450..588535,589165..589730,590033..590176,590903..591107,591188..591281,591753..591932,592547..592690,592774..592931,593011..593101,593178..593237,593828..593965,594120..594261,594757..594833,595205..595303,595659..595765,596027..596166,597082..597281,597406..597534,597612..597731,597825..597944,598391..598487,600385..600727,601961..602228,602323..602400,603799..603919,604002..604171,607263..607543))
location: region:588450-607543:-1
so has part: feature:607263-607543:-1:exon
so has part: feature:604002-604171:-1:exon
so has part: feature:603799-603919:-1:exon
so has part: feature:602323-602400:-1:exon
so has part: feature:601961-602228:-1:exon
so has part: feature:600385-600727:-1:exon
so has part: feature:598391-598487:-1:exon
so has part: feature:597825-597944:-1:exon
so has part: feature:597612-597731:-1:exon
so has part: feature:597406-597534:-1:exon
so has part: feature:597082-597281:-1:exon
so has part: feature:596027-596166:-1:exon
so has part: feature:595659-595765:-1:exon
so has part: feature:595205-595303:-1:exon
so has part: feature:594757-594833:-1:exon
so has part: feature:594120-594261:-1:exon
so has part: feature:593828-593965:-1:exon
so has part: feature:593178-593237:-1:exon
so has part: feature:593011-593101:-1:exon
so has part: feature:592774-592931:-1:exon
so has part: feature:592547-592690:-1:exon
so has part: feature:591753-591932:-1:exon
so has part: feature:591188-591281:-1:exon
so has part: feature:590903-591107:-1:exon
so has part: feature:590033-590176:-1:exon
so has part: feature:589165-589730:-1:exon
so has part: feature:588450-588535:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:607263-607543:-1:exon

position:607263:-1
position: 607263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604002-604171:-1:exon

position:604002:-1
position: 604002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604171:-1
position: 604171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603799-603919:-1:exon

position:603799:-1
position: 603799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603919:-1
position: 603919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602323-602400:-1:exon

position:602323:-1
position: 602323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602400:-1
position: 602400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:601961-602228:-1:exon

position:601961:-1
position: 601961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602228:-1
position: 602228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:600385-600727:-1:exon

position:600385:-1
position: 600385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600727:-1
position: 600727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:598391-598487:-1:exon

position:598391:-1
position: 598391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598487:-1
position: 598487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:597825-597944:-1:exon

position:597825:-1
position: 597825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597944:-1
position: 597944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:597612-597731:-1:exon

position:597612:-1
position: 597612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597731:-1
position: 597731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:597406-597534:-1:exon

position:597406:-1
position: 597406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597534:-1
position: 597534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:597082-597281:-1:exon

position:597082:-1
position: 597082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597281:-1
position: 597281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:596027-596166:-1:exon

position:596027:-1
position: 596027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596166:-1
position: 596166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:595659-595765:-1:exon

position:595659:-1
position: 595659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595765:-1
position: 595765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:595205-595303:-1:exon

position:595205:-1
position: 595205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595303:-1
position: 595303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:594757-594833:-1:exon

position:594757:-1
position: 594757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594833:-1
position: 594833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:594120-594261:-1:exon

position:594120:-1
position: 594120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594261:-1
position: 594261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:593828-593965:-1:exon

position:593828:-1
position: 593828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593965:-1
position: 593965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:593178-593237:-1:exon

position:593178:-1
position: 593178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593237:-1
position: 593237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:593011-593101:-1:exon

position:593011:-1
position: 593011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593101:-1
position: 593101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:592774-592931:-1:exon

position:592774:-1
position: 592774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592931:-1
position: 592931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:592547-592690:-1:exon

position:592547:-1
position: 592547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592690:-1
position: 592690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:591753-591932:-1:exon

position:591753:-1
position: 591753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591932:-1
position: 591932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:591188-591281:-1:exon

position:591188:-1
position: 591188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591281:-1
position: 591281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:590903-591107:-1:exon

position:590903:-1
position: 590903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591107:-1
position: 591107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:590033-590176:-1:exon

position:590033:-1
position: 590033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590176:-1
position: 590176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:589165-589730:-1:exon

position:589165:-1
position: 589165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589730:-1
position: 589730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:588450-588535:-1:exon

position:588535:-1
position: 588535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PAN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PAB-dependent poly(A)-specific ribonuclease subunit PAN2
translation: MNFEGLNPSLAEFAPPLHPALEPVLDPHLNPNLVELDPEGVSLEGLPVPDSVHLMEGMYSELHTAVSEVGVPVSVAHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSSDDIRQIQSLENGVLFLTKTNLKYQSRGGLIIFDYLMDESEDMHSLLLTDNNTLLVAGLQNHVLEMDLNTVQETQKYTVEVPGITIMRQSNRFFFCGHTSGKVSLRDLRSFAVEHEFDAHSGSLSDFDVHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRATTPLQVHIDPFFLRFIPTYTSRLAIISQTGQCQFCEPTGLANPADIFHVNTVGPLIMTFDVSASKQALAFGDSEGCVHLWADSPEVTFNAYSRETDFALPCMVDTLPHLDWNQDLVPLSLIPVPLTSDALLSDWPAANSAPAPRRAPPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKEMDNEFDNFSQVPESPIGREEEPHLYRVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEATGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSFGSSGDSVIGQLFSCEMENCSMCRCGKETVRVSSTLLFTLSYPDSTEKPAKDYEFAQILKRSICLEQNTQAWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYSFQKAMMKRGGFDITKGKEISLGEWKDLGNPDTGHSYPSVEELKNIWIPHAIKMRLTKSKELDVSNWSETDELSPTDDPESVYIYDLMATVVHILDSRTGGSLVGHIKVGETYHQRKEGVTHQQWYLFNDFLIEPVDKCEAVQFDMSWKVPAILYYARRNLNSKYNLVIKNPIEASVLLAEASLARKQRKCHATFIPLMLNEMPQAGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGVPFIDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDVGVKFVGHGLQKDFRVINLMVPKDQVIDTVYLFHIPRKRMISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSPQGSEPEEFRKVLKGLYEKGRKLDWKVPEPDSQSSPKRKILGPPCDRVLLGSGGRDRHRHRGHGRKDRGWAREHGTEEPDRDRDETGREHGRKDGDRARNAASTGNTEERTGNGTGTGTGARRKGLGPDSERDRHRGTAGQTRPRFGPGLRPGALWGGTDPGIGEGGTGSTAGRTKVRVGAETGGTAGRTGSGLEARRDRPGPGSVQGSGRRHGRTDTDPDPDPDPDPDPVSISVSDRSRDAAEPGWGRDHTDIVGGVTPGPAHSRASATRPGPGNEEGALCSGLWKRRICGSSGFCGALDSAL
SIO_010081: PAN2
subclass of: SO_0000673
so part of: PAN2
location: complement(join(588450..588535,589165..589730,590033..590176,590903..591107,591188..591281,591753..591932,592547..592690,592774..592931,593011..593101,593178..593237,593828..593965,594120..594261,594757..594833,595205..595303,595659..595765,596027..596166,597082..597281,597406..597534,597612..597731,597825..597944,598391..598487,600385..600727,601961..602228,602323..602400,603799..603919,604002..604171,607263..607535))
location: region:588450-607535:-1
so has part: feature:607263-607535:-1:exon
so has part: feature:604002-604171:-1:exon
so has part: feature:603799-603919:-1:exon
so has part: feature:602323-602400:-1:exon
so has part: feature:601961-602228:-1:exon
so has part: feature:600385-600727:-1:exon
so has part: feature:598391-598487:-1:exon
so has part: feature:597825-597944:-1:exon
so has part: feature:597612-597731:-1:exon
so has part: feature:597406-597534:-1:exon
so has part: feature:597082-597281:-1:exon
so has part: feature:596027-596166:-1:exon
so has part: feature:595659-595765:-1:exon
so has part: feature:595205-595303:-1:exon
so has part: feature:594757-594833:-1:exon
so has part: feature:594120-594261:-1:exon
so has part: feature:593828-593965:-1:exon
so has part: feature:593178-593237:-1:exon
so has part: feature:593011-593101:-1:exon
so has part: feature:592774-592931:-1:exon
so has part: feature:592547-592690:-1:exon
so has part: feature:591753-591932:-1:exon
so has part: feature:591188-591281:-1:exon
so has part: feature:590903-591107:-1:exon
so has part: feature:590033-590176:-1:exon
so has part: feature:589165-589730:-1:exon
so has part: feature:588450-588535:-1:exon

XP_005061475.1
type: Protein
SIO_000068: ncbiprotein

position:607535:-1
position: 607535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607263-607535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604002-604171:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603799-603919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602323-602400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601961-602228:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600385-600727:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598391-598487:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597825-597944:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:597612-597731:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:597406-597534:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:597082-597281:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:596027-596166:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595659-595765:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:595205-595303:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:594757-594833:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:594120-594261:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:593828-593965:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:593178-593237:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:593011-593101:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:592774-592931:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:592547-592690:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:591753-591932:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:591188-591281:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:590903-591107:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:590033-590176:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:589165-589730:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:588450-588535:-1:exon

LOC101821433
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101821433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(613196..634136)
location: region:613196-634136:-1
so has part: feature:613196-634136:-1:exon
subclass of: SO_0000010

101821433
type: Gene
SIO_000068: ncbigene

position:613196:-1
position: 613196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634136:-1
position: 634136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613196-634136:-1:exon

LOC101821433
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101821433
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304931.1
SIO_010081: LOC101821433
subclass of: SO_0000673
so part of: LOC101821433
location: complement(join(613196..613831,617879..618433,620025..620202,620343..620400,620476..620664,622162..622306,624473..624571,626116..626213,627213..627303,632691..633012,634132..634136))
location: region:613196-634136:-1
so has part: feature:634132-634136:-1:exon
so has part: feature:632691-633012:-1:exon
so has part: feature:627213-627303:-1:exon
so has part: feature:626116-626213:-1:exon
so has part: feature:624473-624571:-1:exon
so has part: feature:622162-622306:-1:exon
so has part: feature:620476-620664:-1:exon
so has part: feature:620343-620400:-1:exon
so has part: feature:620025-620202:-1:exon
so has part: feature:617879-618433:-1:exon
so has part: feature:613196-613831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634132-634136:-1:exon

position:634132:-1
position: 634132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:632691-633012:-1:exon

position:632691:-1
position: 632691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633012:-1
position: 633012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:627213-627303:-1:exon

position:627213:-1
position: 627213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:627303:-1
position: 627303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:626116-626213:-1:exon

position:626116:-1
position: 626116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626213:-1
position: 626213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:624473-624571:-1:exon

position:624473:-1
position: 624473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624571:-1
position: 624571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:622162-622306:-1:exon

position:622162:-1
position: 622162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622306:-1
position: 622306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:620476-620664:-1:exon

position:620476:-1
position: 620476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620664:-1
position: 620664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:620343-620400:-1:exon

position:620343:-1
position: 620343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620400:-1
position: 620400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:620025-620202:-1:exon

position:620025:-1
position: 620025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620202:-1
position: 620202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:617879-618433:-1:exon

position:617879:-1
position: 617879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618433:-1
position: 618433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:613196-613831:-1:exon

position:613831:-1
position: 613831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101821433
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101821433
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
translation: MLPAGEREAHRVLEWVPGVSVFYNLGTSVYFAFQGCKATASTRALEAAEDLGYAGLAALTGGLGGPVAMGVQMGLQPGIKAGVRALIGYFTSAGEPSPVPTAHSEGAHRKVTYERDPLVAETPLLEQRLQEQLTHLLKRSLAYSMIFKKWGQHREGRGSRGSPDPPFSRSAFTTTLPFVIISNNNQFSSAWASILWFNMLSSDPKPNVPSLGFVSRKQEKKLLKSKRTGTFLLRFSESVLGGVTFTWVEHHEKGSPTFHAVDPYTASELVSLALPDIIRDYQMMVEENIPENPLKFLYPNTARDEAFGPYYSQRQEGTLSDSQKYLNRRLIRVSSRQPSKWQTEEELVVATENLETLQLQPGGQGTQQAGGLALPQPQSSGTPQGTPGSLGTLQGVATSPGTLQVTPGSLGTLQGVATSPGTLQVMATSPGVPQVTPGSLGTLQGVATSPGTLQVMATSPGLPQVTPGSLGTLQGVASRLGIAQVVATSPETLQVTPGILGTPQVTATSPGTLQPTGLGLLQAQPQNLEPPRVASGAPNIQGTLQVAPGAVGTVQVLPAGLGVLQVGSGDLGTLQGQQGTRHPGTPRLSWESSALLGPFWDPQTYSQYPRDPQGHPQHPWDTSGTPKQILSIPETLRYPKIPRGIPSISGTVLGPPSRSSASLGPFWDPQVHPQHLWNPLRYPWTPQGYPSPFLGPPGTPGIPRGIPQHPWDPSGTPKRIHSLSGTPRHPRDPRIHPQHLWDPRTSPGPPGLSPSIPGNSRHIPQHPRDPRAPLEPLGLPPDSSGNPKHIP
SIO_010081: LOC101821433
subclass of: SO_0000673
so part of: LOC101821433
location: complement(join(613196..613831,617879..618433,620025..620202,620343..620400,620476..620664,622162..622306,624473..624571,626116..626213,627213..627303,632691..633012,634132..634136))
location: region:613196-634136:-1
so has part: feature:634132-634136:-1:exon
so has part: feature:632691-633012:-1:exon
so has part: feature:627213-627303:-1:exon
so has part: feature:626116-626213:-1:exon
so has part: feature:624473-624571:-1:exon
so has part: feature:622162-622306:-1:exon
so has part: feature:620476-620664:-1:exon
so has part: feature:620343-620400:-1:exon
so has part: feature:620025-620202:-1:exon
so has part: feature:617879-618433:-1:exon
so has part: feature:613196-613831:-1:exon

XP_016160417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:634132-634136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:632691-633012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:627213-627303:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:626116-626213:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:624473-624571:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622162-622306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620476-620664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:620343-620400:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:620025-620202:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617879-618433:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613196-613831:-1:exon

TIMELESS
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TIMELESS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(634034..646514)
location: region:634034-646514:-1
so has part: feature:634034-646514:-1:exon
subclass of: SO_0000010

101821226
type: Gene
SIO_000068: ncbigene

position:634034:-1
position: 634034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646514:-1
position: 646514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634034-646514:-1:exon

TIMELESS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TIMELESS
product: timeless circadian clock
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304932.1
SIO_010081: TIMELESS
subclass of: SO_0000673
so part of: TIMELESS
location: complement(join(634034..634395,634522..634637,634759..634839,635669..635822,636006..636074,636160..636331,636415..636563,636635..636717,637769..637892,637973..638058,638128..638279,639435..639666,641053..641270,641391..641513,641591..641760,641845..641948,642358..642575,642659..642835,643589..643676,643755..643888,643965..644120,644215..644316,645105..645167,645242..645356,645439..645608,646216..646514))
location: region:634034-646514:-1
so has part: feature:646216-646514:-1:exon
so has part: feature:645439-645608:-1:exon
so has part: feature:645242-645356:-1:exon
so has part: feature:645105-645167:-1:exon
so has part: feature:644215-644316:-1:exon
so has part: feature:643965-644120:-1:exon
so has part: feature:643755-643888:-1:exon
so has part: feature:643589-643676:-1:exon
so has part: feature:642659-642835:-1:exon
so has part: feature:642358-642575:-1:exon
so has part: feature:641845-641948:-1:exon
so has part: feature:641591-641760:-1:exon
so has part: feature:641391-641513:-1:exon
so has part: feature:641053-641270:-1:exon
so has part: feature:639435-639666:-1:exon
so has part: feature:638128-638279:-1:exon
so has part: feature:637973-638058:-1:exon
so has part: feature:637769-637892:-1:exon
so has part: feature:636635-636717:-1:exon
so has part: feature:636415-636563:-1:exon
so has part: feature:636160-636331:-1:exon
so has part: feature:636006-636074:-1:exon
so has part: feature:635669-635822:-1:exon
so has part: feature:634759-634839:-1:exon
so has part: feature:634522-634637:-1:exon
so has part: feature:634034-634395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646216-646514:-1:exon

position:646216:-1
position: 646216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645439-645608:-1:exon

position:645439:-1
position: 645439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645608:-1
position: 645608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645242-645356:-1:exon

position:645242:-1
position: 645242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645356:-1
position: 645356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:645105-645167:-1:exon

position:645105:-1
position: 645105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645167:-1
position: 645167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:644215-644316:-1:exon

position:644215:-1
position: 644215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644316:-1
position: 644316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:643965-644120:-1:exon

position:643965:-1
position: 643965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644120:-1
position: 644120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:643755-643888:-1:exon

position:643755:-1
position: 643755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643888:-1
position: 643888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:643589-643676:-1:exon

position:643589:-1
position: 643589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643676:-1
position: 643676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:642659-642835:-1:exon

position:642659:-1
position: 642659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642835:-1
position: 642835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:642358-642575:-1:exon

position:642358:-1
position: 642358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642575:-1
position: 642575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:641845-641948:-1:exon

position:641845:-1
position: 641845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641948:-1
position: 641948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:641591-641760:-1:exon

position:641591:-1
position: 641591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641760:-1
position: 641760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:641391-641513:-1:exon

position:641391:-1
position: 641391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641513:-1
position: 641513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:641053-641270:-1:exon

position:641053:-1
position: 641053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641270:-1
position: 641270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:639435-639666:-1:exon

position:639435:-1
position: 639435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639666:-1
position: 639666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:638128-638279:-1:exon

position:638128:-1
position: 638128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638279:-1
position: 638279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:637973-638058:-1:exon

position:637973:-1
position: 637973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638058:-1
position: 638058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:637769-637892:-1:exon

position:637769:-1
position: 637769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637892:-1
position: 637892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:636635-636717:-1:exon

position:636635:-1
position: 636635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636717:-1
position: 636717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:636415-636563:-1:exon

position:636415:-1
position: 636415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636563:-1
position: 636563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:636160-636331:-1:exon

position:636160:-1
position: 636160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636331:-1
position: 636331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:636006-636074:-1:exon

position:636006:-1
position: 636006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636074:-1
position: 636074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:635669-635822:-1:exon

position:635669:-1
position: 635669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635822:-1
position: 635822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:634759-634839:-1:exon

position:634759:-1
position: 634759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634839:-1
position: 634839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:634522-634637:-1:exon

position:634522:-1
position: 634522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634637:-1
position: 634637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:634034-634395:-1:exon

position:634395:-1
position: 634395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMELESS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TIMELESS
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein timeless homolog
translation: MDWYMMNCELLATCSALGYLEGDVYHREPDCLESVKDLIRYLRHEDETRDVRQQLGAAQILQNDLPPNDLLPILVQYPQDKVLFDAVIRLMVNLTQPALLCFGKVPADATSRHHFLQVLSYLQAYKEAFASEKVFVVLSEKLYNLLQLDWEQRQEEDTLLIERILLLVRNVLHVPPDPAEEQGVDGDASLHDRVLWALHISGMDDLLKFLASAQVEQQWALHVLEIISLMFRDQSPEELAALGQGTAGAEHGEDTQELETLRQRELAEKRARALQRPSRHSRFGGSYVLQGLKSIGDRDVVFHKGLHNLKSYSHDLGKEPQRVPRRRQAAPESEPWRRSARNVRLFLRHFCQDFLEGCYNRLMLLVKDQLVREKAQQHDETYYLWATAFFMAFNRRHGFRPELVSETVGVRAFHFIEQNLTTYYEMALMDKKEATTWARRMHLALKAYQELLRTVQEMDRSPEQAVRDSSQVIKSNIFYLMEYRELFLALFRKFDETKQPRSFLRDLVETAHLFLRMLERFCRGRANLVVQSKRVRRKKKKPREPAAPAQPSAAELEQLWEGLAPQLQACLEGEVPLPEDVVPFDAASETPVEEQRAEALLRIQECLRGSRLPQALRLLRSARYQHRAAQLLPRARGHGASLSPLSASDPGLPRRFACAPVVRALVLLLRGYARNSPRTNHCAARLLHRLARQLRMEPLLFQLSLFALFHRLLSDPAAAAYQELVALAKFILGKFFALAATNKKAFVELLFWKSPAIVYEMTKGYSSLQEGEGSTQSRVPPWTPQEEQELRELYWKYKEVEGGDVIAAILAQLPTPGRTRRQVVKQLVRMGLASSAKDFPRERKGTNIVLWTQEQEEELTRLFEEFQGSDDVLGNIMKHLTARRSRARVVEKLLGLGLVAERKELYKKRRRKSQGPGPGQAAAGVPAVPAQDSSGEDEDSEEDEDEDEDEAEKGPMEEHWVPEEGAGQDLAQHLHQEGLAGPLRWLENCLRRVAEDREEDGVSHPVPLVPLTEENEDAMEDRRFRTLLRQLGLRPPASEQVRSLSPSPSPSPCGAGSEPPSSCPSAEPLPAGLGSDSESEEPVPVPVPSPVQPRSKRRRELASEDEDEDEDEDGGSSGTEPAPAAPCSEEDEEDEDPQPRGRRKRIRCLEEEEEED
SIO_010081: TIMELESS
subclass of: SO_0000673
so part of: TIMELESS
location: complement(join(634277..634395,634522..634637,634759..634839,635669..635822,636006..636074,636160..636331,636415..636563,636635..636717,637769..637892,637973..638058,638128..638279,639435..639666,641053..641270,641391..641513,641591..641760,641845..641948,642358..642575,642659..642835,643589..643676,643755..643888,643965..644120,644215..644316,645105..645167,645242..645356,645439..645608,646216..646312))
location: region:634277-646312:-1
so has part: feature:646216-646312:-1:exon
so has part: feature:645439-645608:-1:exon
so has part: feature:645242-645356:-1:exon
so has part: feature:645105-645167:-1:exon
so has part: feature:644215-644316:-1:exon
so has part: feature:643965-644120:-1:exon
so has part: feature:643755-643888:-1:exon
so has part: feature:643589-643676:-1:exon
so has part: feature:642659-642835:-1:exon
so has part: feature:642358-642575:-1:exon
so has part: feature:641845-641948:-1:exon
so has part: feature:641591-641760:-1:exon
so has part: feature:641391-641513:-1:exon
so has part: feature:641053-641270:-1:exon
so has part: feature:639435-639666:-1:exon
so has part: feature:638128-638279:-1:exon
so has part: feature:637973-638058:-1:exon
so has part: feature:637769-637892:-1:exon
so has part: feature:636635-636717:-1:exon
so has part: feature:636415-636563:-1:exon
so has part: feature:636160-636331:-1:exon
so has part: feature:636006-636074:-1:exon
so has part: feature:635669-635822:-1:exon
so has part: feature:634759-634839:-1:exon
so has part: feature:634522-634637:-1:exon
so has part: feature:634277-634395:-1:exon

XP_016160418.1
type: Protein
SIO_000068: ncbiprotein

position:634277:-1
position: 634277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646312:-1
position: 646312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646216-646312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645439-645608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645242-645356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645105-645167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644215-644316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:643965-644120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:643755-643888:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:643589-643676:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:642659-642835:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:642358-642575:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:641845-641948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:641591-641760:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:641391-641513:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:641053-641270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:639435-639666:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:638128-638279:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:637973-638058:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:637769-637892:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:636635-636717:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:636415-636563:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:636160-636331:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:636006-636074:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:635669-635822:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:634759-634839:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:634522-634637:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:634277-634395:-1:exon

MIP
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(648609..649362)
location: region:648609-649362:-1
so has part: feature:648609-649362:-1:exon
subclass of: SO_0000010

101821039
type: Gene
SIO_000068: ncbigene

position:648609:-1
position: 648609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649362:-1
position: 649362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648609-649362:-1:exon

MIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MIP
product: major intrinsic protein of lens fiber
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061415.1
SIO_010081: MIP
subclass of: SO_0000673
so part of: MIP
location: complement(join(648609..648626,648707..648787,648886..649362))
location: region:648609-649362:-1
so has part: feature:648886-649362:-1:exon
so has part: feature:648707-648787:-1:exon
so has part: feature:648609-648626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:648886-649362:-1:exon

position:648886:-1
position: 648886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648707-648787:-1:exon

position:648707:-1
position: 648707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648787:-1
position: 648787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:648609-648626:-1:exon

position:648626:-1
position: 648626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lens fiber major intrinsic protein
translation: MGEQLCGVLSPLPAQLHPGVGPGQGTVVELLLTAQFVLCVFASFDDRHDGRPAMAAVPVGFSLALGHLFGIHYTGASMNPARSFAPAVITRNFANHWPLCRR
SIO_010081: MIP
subclass of: SO_0000673
so part of: MIP
location: complement(join(648609..648626,648707..648787,648886..649095))
location: region:648609-649095:-1
so has part: feature:648886-649095:-1:exon
so has part: feature:648707-648787:-1:exon
so has part: feature:648609-648626:-1:exon

XP_005061472.1
type: Protein
SIO_000068: ncbiprotein

position:649095:-1
position: 649095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:648886-649095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648707-648787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648609-648626:-1:exon

BAZ2A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BAZ2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(675868..704765)
location: region:675868-704765:-1
so has part: feature:675868-704765:-1:exon
subclass of: SO_0000010

101820848
type: Gene
SIO_000068: ncbigene

position:675868:-1
position: 675868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704765:-1
position: 704765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675868-704765:-1:exon

BAZ2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BAZ2A
product: bromodomain adjacent to zinc finger domain 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304934.1
SIO_010081: BAZ2A
subclass of: SO_0000673
so part of: BAZ2A
location: complement(join(675868..676238,682280..682494,686034..686333,688945..689220,689253..689534,689607..689742,689820..689879,689967..690129,690233..690307,690395..690609,693823..694077,694155..694349,694453..694518,694602..694663,694920..695130,695203..695342,698981..699031,699730..699940,700203..700342,701594..701755,702027..702395,702782..702865,703577..704765))
location: region:675868-704765:-1
so has part: feature:703577-704765:-1:exon
so has part: feature:702782-702865:-1:exon
so has part: feature:702027-702395:-1:exon
so has part: feature:701594-701755:-1:exon
so has part: feature:700203-700342:-1:exon
so has part: feature:699730-699940:-1:exon
so has part: feature:698981-699031:-1:exon
so has part: feature:695203-695342:-1:exon
so has part: feature:694920-695130:-1:exon
so has part: feature:694602-694663:-1:exon
so has part: feature:694453-694518:-1:exon
so has part: feature:694155-694349:-1:exon
so has part: feature:693823-694077:-1:exon
so has part: feature:690395-690609:-1:exon
so has part: feature:690233-690307:-1:exon
so has part: feature:689967-690129:-1:exon
so has part: feature:689820-689879:-1:exon
so has part: feature:689607-689742:-1:exon
so has part: feature:689253-689534:-1:exon
so has part: feature:688945-689220:-1:exon
so has part: feature:686034-686333:-1:exon
so has part: feature:682280-682494:-1:exon
so has part: feature:675868-676238:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:703577-704765:-1:exon

position:703577:-1
position: 703577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702782-702865:-1:exon

position:702782:-1
position: 702782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702865:-1
position: 702865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:702027-702395:-1:exon

position:702027:-1
position: 702027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702395:-1
position: 702395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:701594-701755:-1:exon

position:701594:-1
position: 701594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701755:-1
position: 701755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:700203-700342:-1:exon

position:700203:-1
position: 700203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700342:-1
position: 700342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:699730-699940:-1:exon

position:699730:-1
position: 699730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699940:-1
position: 699940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:698981-699031:-1:exon

position:698981:-1
position: 698981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699031:-1
position: 699031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:695203-695342:-1:exon

position:695203:-1
position: 695203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695342:-1
position: 695342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:694920-695130:-1:exon

position:694920:-1
position: 694920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695130:-1
position: 695130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:694602-694663:-1:exon

position:694602:-1
position: 694602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694663:-1
position: 694663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:694453-694518:-1:exon

position:694453:-1
position: 694453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694518:-1
position: 694518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:694155-694349:-1:exon

position:694155:-1
position: 694155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694349:-1
position: 694349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:693823-694077:-1:exon

position:693823:-1
position: 693823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694077:-1
position: 694077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:690395-690609:-1:exon

position:690395:-1
position: 690395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690609:-1
position: 690609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:690233-690307:-1:exon

position:690233:-1
position: 690233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690307:-1
position: 690307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:689967-690129:-1:exon

position:689967:-1
position: 689967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690129:-1
position: 690129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:689820-689879:-1:exon

position:689820:-1
position: 689820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689879:-1
position: 689879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:689607-689742:-1:exon

position:689607:-1
position: 689607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689742:-1
position: 689742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:689253-689534:-1:exon

position:689253:-1
position: 689253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689534:-1
position: 689534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:688945-689220:-1:exon

position:688945:-1
position: 688945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689220:-1
position: 689220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:686034-686333:-1:exon

position:686034:-1
position: 686034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686333:-1
position: 686333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:682280-682494:-1:exon

position:682280:-1
position: 682280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682494:-1
position: 682494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:675868-676238:-1:exon

position:676238:-1
position: 676238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BAZ2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BAZ2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain adjacent to zinc finger domain protein 2A
translation: METLELCLGRGVPSTMGGMAGTLRPQGYSCARSVGFCWVLVGSQSCFGGVLGWEPPRSHPGMVAHGDDTLVMAIPGDSGDRLCSKQVTAHPAGVAGPEHSAGGISVLGGLHCRSSPCPALEPQAGTAGEGMVSGGWSPHWQPQPVPVTDPVHLLPRAEMETNNHFNFTGLSSAPAASGPKPTPASGDPPFAHSSPLGFPPQGKSLNGGMNVNGFSTVSHPGTSGTFSPGPPPRPASPGHGTNLRAAGPEFWGNGTAGPMGLNFDSQELYDSFHEQSFELMQNGPDGFYAAGQSSPILSSDAQPFPLAPDEPDPGQGAADGAAKEMPSTTTTTTTTITENGAGLVGSQELEEAQPDLKMCSYNGAAAAGTGSLGPEGPVLGDASPIAPRLEDTPILSEDPLEPFESLARGDNAELKSGDHAGLRESGSLELDPRLEPESPAPSAEEEEEGEEEEEELYPLPVRTPRSPAPPARRPTCPLPAGDAPRRRIATQEEVRFPLQHGYVRCPRPSSCPHPAPQLWLLPTDPCLNGGMNVNGFSTVSHPAPLTALPPAPCAQYLSRNMVQDVRREHFSFSPRMPVGDFYEERDTPEGVQWVKLSPEEIPGRIQAITGKRGRPRNAEKAKPKEPPATKRGRGRPPKLRMVDLLSKTDARLLKRLEAQEVLSEEDKLKMSKIKKKMRRKAKNKQKQEAKAPRAKEAKKKSKAKEKKGKPEKGKDKARPKEKKGTKGARKADKGPLAQRRLEERRRQQLILEEMKKPTEDMCLGDHQPLPAFSRIPGLVLPGRAFSDCLTVVEFLQSYGKVLGLEPARDVPTLGALQEGLLGVAPGAGQLQDLLVRLLQAALCDPGLPPYCQSMKILGEKVSEISLNRDTVSEVLRCFLTAHGAGAELCQGLRTKPFQALPPELKAAILVFLVNELNSSALIISEIDKTLESMSSYRKNKWIIEGRLRRLKVALAKKTGRPESEITGLEDGRRRRSSRLTEDVGLEMEEEEETRGRRSRREEEADTSASSVPELERQIEKLAKRQMFFRKKLLHSSQTLRAASLGQDRFRRRYWVLPHLGGIFVEGAEAAPPRVTAAELEAQEPPEEKVSPLVAPVKEEPAAVPVASRTSCPTSASRARGRPRKGKEELAQHCEPCPTPLNGVLEEPEPLGQSQHDLSQSAFREHDLSQSAFLSWLSQTQSSLLKDSVLTPASSPGKGDTGLPPPEGPSDPVEEEEEEEEEEEEEERAPEAVAKRGPWFNLLPRTPCDGRAALGGPLRCPGTALSPGTPGTPTVPRRGAEPWDALGHPRCPGAALSPGAAPLAEMQSGWWWLRDPEELEAVARALHPRGIREKALHKHLTKHREFLREVCLRSSTDPIFHPAAAVSQEALAQWSVPDRAYETDLGVLQWVEELEQRVLMADLQIRVGSWGVGVGTRRHRVIMCWCFHGVGRGGGDAGGCREALTPSPCAPQTCLVCRRGDDDEQLLLCDGCDRGCHLYCHRPRMAQVPEGDWFCSVCVARVRAGIPDPAGKGEKR
SIO_010081: BAZ2A
subclass of: SO_0000673
so part of: BAZ2A
location: complement(join(675969..676238,682280..682494,686034..686333,688945..689220,689253..689534,689607..689742,689820..689879,689967..690129,690233..690307,690395..690609,693823..694077,694155..694349,694453..694518,694602..694663,694920..695130,695203..695342,698981..699031,699730..699940,700203..700342,701594..701755,702027..702395,702782..702865,703577..704186))
location: region:675969-704186:-1
so has part: feature:703577-704186:-1:exon
so has part: feature:702782-702865:-1:exon
so has part: feature:702027-702395:-1:exon
so has part: feature:701594-701755:-1:exon
so has part: feature:700203-700342:-1:exon
so has part: feature:699730-699940:-1:exon
so has part: feature:698981-699031:-1:exon
so has part: feature:695203-695342:-1:exon
so has part: feature:694920-695130:-1:exon
so has part: feature:694602-694663:-1:exon
so has part: feature:694453-694518:-1:exon
so has part: feature:694155-694349:-1:exon
so has part: feature:693823-694077:-1:exon
so has part: feature:690395-690609:-1:exon
so has part: feature:690233-690307:-1:exon
so has part: feature:689967-690129:-1:exon
so has part: feature:689820-689879:-1:exon
so has part: feature:689607-689742:-1:exon
so has part: feature:689253-689534:-1:exon
so has part: feature:688945-689220:-1:exon
so has part: feature:686034-686333:-1:exon
so has part: feature:682280-682494:-1:exon
so has part: feature:675969-676238:-1:exon

XP_016160420.1
type: Protein
SIO_000068: ncbiprotein

position:675969:-1
position: 675969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704186:-1
position: 704186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703577-704186:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702782-702865:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702027-702395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701594-701755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:700203-700342:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:699730-699940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698981-699031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:695203-695342:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:694920-695130:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:694602-694663:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:694453-694518:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:694155-694349:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:693823-694077:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:690395-690609:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:690233-690307:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:689967-690129:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:689820-689879:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:689607-689742:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:689253-689534:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:688945-689220:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:686034-686333:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:682280-682494:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:675969-676238:-1:exon

ATP5B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ATP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(709583..>712158)
location: region:709583-712158:-1
so has part: feature:709583-712158:-1:exon
subclass of: SO_0000010

101820650
type: Gene
SIO_000068: ncbigene

position:709583:-1
position: 709583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712158:-1
position: 712158
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:709583-712158:-1:exon

ATP5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ATP5B
product: ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005061413.2
SIO_010081: ATP5B
subclass of: SO_0000673
so part of: ATP5B
location: complement(join(709583..709687,709765..709966,710051..710263,710347..710469,710554..710712,710824..711008,711239..711360,711488..711662,711963..>712158))
location: region:709583-712158:-1
so has part: feature:711963-712158:-1:exon
so has part: feature:711488-711662:-1:exon
so has part: feature:711239-711360:-1:exon
so has part: feature:710824-711008:-1:exon
so has part: feature:710554-710712:-1:exon
so has part: feature:710347-710469:-1:exon
so has part: feature:710051-710263:-1:exon
so has part: feature:709765-709966:-1:exon
so has part: feature:709583-709687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:711963-712158:-1:exon

position:711963:-1
position: 711963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:711488-711662:-1:exon

position:711488:-1
position: 711488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711662:-1
position: 711662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:711239-711360:-1:exon

position:711239:-1
position: 711239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711360:-1
position: 711360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:710824-711008:-1:exon

position:710824:-1
position: 710824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711008:-1
position: 711008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710554-710712:-1:exon

position:710554:-1
position: 710554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710712:-1
position: 710712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:710347-710469:-1:exon

position:710347:-1
position: 710347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710469:-1
position: 710469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:710051-710263:-1:exon

position:710051:-1
position: 710051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710263:-1
position: 710263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:709765-709966:-1:exon

position:709765:-1
position: 709765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709966:-1
position: 709966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:709583-709687:-1:exon

position:709687:-1
position: 709687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ATP5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit beta, mitochondrial
translation: PLPAGRDYAAQAAPAAKAGSTTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTRKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGPEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFKQILAGEYDHLPEQAFYMVGPIEEAVAKAEKLAEEHA
SIO_010081: ATP5B
subclass of: SO_0000673
so part of: ATP5B
location: complement(join(709590..709687,709765..709966,710051..710263,710347..710469,710554..710712,710824..711008,711239..711360,711488..711662,711963..>712158))
location: region:709590-712158:-1
so has part: feature:711963-712158:-1:exon
so has part: feature:711488-711662:-1:exon
so has part: feature:711239-711360:-1:exon
so has part: feature:710824-711008:-1:exon
so has part: feature:710554-710712:-1:exon
so has part: feature:710347-710469:-1:exon
so has part: feature:710051-710263:-1:exon
so has part: feature:709765-709966:-1:exon
so has part: feature:709590-709687:-1:exon

XP_005061470.2
type: Protein
SIO_000068: ncbiprotein

position:709590:-1
position: 709590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:711963-712158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:711488-711662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711239-711360:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710824-711008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710554-710712:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:710347-710469:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:710051-710263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:709765-709966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:709590-709687:-1:exon

PTGES3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PTGES3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(714791..721896)
location: region:714791-721896:-1
so has part: feature:714791-721896:-1:exon
subclass of: SO_0000010

101815630
type: Gene
SIO_000068: ncbigene

position:714791:-1
position: 714791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721896:-1
position: 721896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714791-721896:-1:exon

PTGES3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PTGES3
product: prostaglandin E synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005061388.1
SIO_010081: PTGES3
subclass of: SO_0000673
so part of: PTGES3
location: complement(join(714791..715066,715528..715552,715900..715962,716161..716250,716452..716550,717047..717116,717211..717324,721777..721896))
location: region:714791-721896:-1
so has part: feature:721777-721896:-1:exon
so has part: feature:717211-717324:-1:exon
so has part: feature:717047-717116:-1:exon
so has part: feature:716452-716550:-1:exon
so has part: feature:716161-716250:-1:exon
so has part: feature:715900-715962:-1:exon
so has part: feature:715528-715552:-1:exon
so has part: feature:714791-715066:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721777-721896:-1:exon

position:721777:-1
position: 721777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:717211-717324:-1:exon

position:717211:-1
position: 717211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717324:-1
position: 717324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717047-717116:-1:exon

position:717047:-1
position: 717047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717116:-1
position: 717116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:716452-716550:-1:exon

position:716452:-1
position: 716452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716550:-1
position: 716550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:716161-716250:-1:exon

position:716161:-1
position: 716161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716250:-1
position: 716250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:715900-715962:-1:exon

position:715900:-1
position: 715900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715962:-1
position: 715962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:715528-715552:-1:exon

position:715528:-1
position: 715528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715552:-1
position: 715552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:714791-715066:-1:exon

position:715066:-1
position: 715066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTGES3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PTGES3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin E synthase 3
translation: MGLRGVSGACCAFLGGSVAPGTRRTVAAETAENSRQPASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFNNIDPNESKHKRTDRSILCCLRKGESGQAWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNMGGDDDVDLPEVDGADDDSPDSDDEKMPDLE
SIO_010081: PTGES3
subclass of: SO_0000673
so part of: PTGES3
location: complement(join(715047..715066,715528..715552,715900..715962,716161..716250,716452..716550,717047..717116,717211..717324,721777..721880))
location: region:715047-721880:-1
so has part: feature:721777-721880:-1:exon
so has part: feature:717211-717324:-1:exon
so has part: feature:717047-717116:-1:exon
so has part: feature:716452-716550:-1:exon
so has part: feature:716161-716250:-1:exon
so has part: feature:715900-715962:-1:exon
so has part: feature:715528-715552:-1:exon
so has part: feature:715047-715066:-1:exon

XP_005061445.1
type: Protein
SIO_000068: ncbiprotein

position:715047:-1
position: 715047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721880:-1
position: 721880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721777-721880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:717211-717324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717047-717116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716452-716550:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:716161-716250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:715900-715962:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:715528-715552:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:715047-715066:-1:exon

NACA
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(723779..734419)
location: region:723779-734419:-1
so has part: feature:723779-734419:-1:exon
subclass of: SO_0000010

101815309
type: Gene
SIO_000068: ncbigene

position:723779:-1
position: 723779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734419:-1
position: 734419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723779-734419:-1:exon

NACA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NACA
product: nascent polypeptide-associated complex alpha subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005061387.2
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(723779..723906,723994..724116,724339..724467,724604..724750,724969..725046,725131..725216,734331..734419))
location: region:723779-734419:-1
so has part: feature:734331-734419:-1:exon
so has part: feature:725131-725216:-1:exon
so has part: feature:724969-725046:-1:exon
so has part: feature:724604-724750:-1:exon
so has part: feature:724339-724467:-1:exon
so has part: feature:723994-724116:-1:exon
so has part: feature:723779-723906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:734331-734419:-1:exon

position:734331:-1
position: 734331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725131-725216:-1:exon

position:725131:-1
position: 725131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725216:-1
position: 725216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724969-725046:-1:exon

position:724969:-1
position: 724969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725046:-1
position: 725046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:724604-724750:-1:exon

position:724604:-1
position: 724604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724750:-1
position: 724750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:724339-724467:-1:exon

position:724339:-1
position: 724339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724467:-1
position: 724467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:723994-724116:-1:exon

position:723994:-1
position: 723994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724116:-1
position: 724116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:723779-723906:-1:exon

position:723906:-1
position: 723906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NACA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NACA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha
translation: MPGEATETVPATEQELPQPQAETGSGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKVQGEPVSNIQENTQTPTVQEESEEEEVDETGVEVKDIELVMSQANVSRAKAVRALKNNSNDIVNAIMELTM
SIO_010081: NACA
subclass of: SO_0000673
so part of: NACA
location: complement(join(723892..723906,723994..724116,724339..724467,724604..724750,724969..725046,725131..725216,734331..734400))
location: region:723892-734400:-1
so has part: feature:734331-734400:-1:exon
so has part: feature:725131-725216:-1:exon
so has part: feature:724969-725046:-1:exon
so has part: feature:724604-724750:-1:exon
so has part: feature:724339-724467:-1:exon
so has part: feature:723994-724116:-1:exon
so has part: feature:723892-723906:-1:exon

XP_005061444.1
type: Protein
SIO_000068: ncbiprotein

position:723892:-1
position: 723892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734400:-1
position: 734400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734331-734400:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725131-725216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724969-725046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724604-724750:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:724339-724467:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723994-724116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723892-723906:-1:exon

LOC101815107
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101815107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 757770..759776
location: region:757770-759776:1
so has part: feature:757770-759776:1:exon
subclass of: SO_0000010

101815107
type: Gene
SIO_000068: ncbigene

position:757770:1
position: 757770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759776:1
position: 759776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757770-759776:1:exon

LOC101815107
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101815107
product: retinol dehydrogenase 16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005061385.2
SIO_010081: LOC101815107
subclass of: SO_0000673
so part of: LOC101815107
location: join(757770..758224,758360..758618,759049..759212,759375..759776)
location: region:757770-759776:1
so has part: feature:757770-758224:1:exon
so has part: feature:758360-758618:1:exon
so has part: feature:759049-759212:1:exon
so has part: feature:759375-759776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757770-758224:1:exon

position:758224:1
position: 758224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758360-758618:1:exon

position:758360:1
position: 758360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758618:1
position: 758618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:759049-759212:1:exon

position:759049:1
position: 759049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759212:1
position: 759212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:759375-759776:1:exon

position:759375:1
position: 759375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101815107
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101815107
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 16-like
translation: MWLYVVASLLGLFLLRRWHRERQTVPRLSEKHVLITGCDSGFGSLLARQLDARGLRVLAACLTEAGAAQLRAATSNRLQTVLLDVTSSKSIADVTAWVRERVGDQGLWGLVNNAGIAIPTAPNEWLTKEDFVKVLNVNLVGLVEVTLSLLPLLRRARGRVVNVASVMGRVSFFGGGYCPSKYGVEAFSDSLRLEMRNFGVKVCVIEPGYFKTMITNVDNLEKNFHSSWQKLPEEVRTAYGESYLKQFVTMLKTLQKTYNSDLSLVTNCMEHALTSLHPRSRYSAGWDAKLLYLPISYLPSALSDALFSLFYPKSVGKA
SIO_010081: LOC101815107
subclass of: SO_0000673
so part of: LOC101815107
location: join(757909..758224,758360..758618,759049..759212,759375..759592)
location: region:757909-759592:1
so has part: feature:757909-758224:1:exon
so has part: feature:758360-758618:1:exon
so has part: feature:759049-759212:1:exon
so has part: feature:759375-759592:1:exon

XP_005061442.1
type: Protein
SIO_000068: ncbiprotein

position:757909:1
position: 757909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759592:1
position: 759592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757909-758224:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758360-758618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:759049-759212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:759375-759592:1:exon

LOC101820257
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101820257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 760351..762193
location: region:760351-762193:1
so has part: feature:760351-762193:1:exon
subclass of: SO_0000010

101820257
type: Gene
SIO_000068: ncbigene

position:760351:1
position: 760351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762193:1
position: 762193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760351-762193:1:exon

LOC101820257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101820257
product: retinol dehydrogenase 16-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304968.1
SIO_010081: LOC101820257
subclass of: SO_0000673
so part of: LOC101820257
location: join(760351..760684,760820..761078,761665..761797,761857..761887,761965..762193)
location: region:760351-762193:1
so has part: feature:760351-760684:1:exon
so has part: feature:760820-761078:1:exon
so has part: feature:761665-761797:1:exon
so has part: feature:761857-761887:1:exon
so has part: feature:761965-762193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:760351-760684:1:exon

position:760684:1
position: 760684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760820-761078:1:exon

position:760820:1
position: 760820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761078:1
position: 761078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761665-761797:1:exon

position:761665:1
position: 761665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761797:1
position: 761797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:761857-761887:1:exon

position:761857:1
position: 761857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761887:1
position: 761887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:761965-762193:1:exon

position:761965:1
position: 761965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101820257
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101820257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 16-like
translation: MWLYVVASLLGLFLLRRWHRERQTVPRLSEKHVLITGCDSGFGSLLARQLDARGLRVLAACLTEAGAAQLRAATSNRLQTVLLDVTSSKSIADVTAWVRERVGDQGLWGLVNNAGIAIPTAPNEWLTKEDFVKVLNVNLVGLVEVTLSLLPLLRRARGRVVNVASVMGRVSCFGGGYCISKYGVEAFSDSLRRELRPFGVRVSIIEPGGFQTGITDPAPLVKGFVDLWERLPAEAQAAYGRHYVDKYAKNTTLLHRLSSSRLSHVTHVMTHALLSRCPRSRYAAGWDARLIFVPLSYCPAWLSDTIIGLFLPIPASGIP
SIO_010081: LOC101820257
subclass of: SO_0000673
so part of: LOC101820257
location: join(760369..760684,760820..761078,761665..761797,761857..761887,761965..762185)
location: region:760369-762185:1
so has part: feature:760369-760684:1:exon
so has part: feature:760820-761078:1:exon
so has part: feature:761665-761797:1:exon
so has part: feature:761857-761887:1:exon
so has part: feature:761965-762185:1:exon

XP_016160454.1
type: Protein
SIO_000068: ncbiprotein

position:760369:1
position: 760369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762185:1
position: 762185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760369-760684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760820-761078:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761665-761797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:761857-761887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761965-762185:1:exon

GPR182
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GPR182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 764043..768219
location: region:764043-768219:1
so has part: feature:764043-768219:1:exon
subclass of: SO_0000010

101814916
type: Gene
SIO_000068: ncbigene

position:764043:1
position: 764043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768219:1
position: 768219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764043-768219:1:exon

GPR182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GPR182
product: G protein-coupled receptor 182
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005061384.1
SIO_010081: GPR182
subclass of: SO_0000673
so part of: GPR182
location: join(764043..764236,765580..768219)
location: region:764043-768219:1
so has part: feature:764043-764236:1:exon
so has part: feature:765580-768219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:764043-764236:1:exon

position:764236:1
position: 764236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765580-768219:1:exon

position:765580:1
position: 765580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPR182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GPR182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 182
translation: MAEATTVPTETHTVPSEYGDYHNLSELFYLLNHTYTYCEFSLDENVKRVILFILYLVIFVVGLVENLLVIWVNWQTRGNKSLVNLYIINMAIADLGVLLSLPIWMLEMTLNYTWLWGSFLCRFTHYFYFANMYASIFFLTCLSVDRYVTLTSSSLFWQRHQHRARRAVCAGSWVLAAAIPVLEVAHMQLVNTGEPICIFMAPFETYDQWALAVSLATTTLGFLVPFPIIAVFNALTARFLRRTKPESRKRCLLIYAYIGVFLLSWLPFHVVLTLVTLEGNHLVLHCTFAHFLYFFYDIIDCFTLLHCVVNPILYNFLSKSFRSKLISAVVKYIPKDRGGQRGAGSSSSSTQHSIVIAKDNSPPN
SIO_010081: GPR182
subclass of: SO_0000673
so part of: GPR182
location: 765588..766682
location: region:765588-766682:1
so has part: feature:765588-766682:1:exon

XP_005061441.1
type: Protein
SIO_000068: ncbiprotein

position:765588:1
position: 765588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766682:1
position: 766682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765588-766682:1:exon

ZBTB39
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ZBTB39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(771797..774043)
location: region:771797-774043:-1
so has part: feature:771797-774043:-1:exon
subclass of: SO_0000010

101814505
type: Gene
SIO_000068: ncbigene

position:771797:-1
position: 771797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774043:-1
position: 774043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771797-774043:-1:exon

ZBTB39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZBTB39
product: zinc finger and BTB domain containing 39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061383.1
SIO_010081: ZBTB39
subclass of: SO_0000673
so part of: ZBTB39
location: complement(771797..774043)
location: region:771797-774043:-1
so has part: feature:771797-774043:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:771797-774043:-1:exon

ZBTB39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZBTB39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 39
translation: MGMRIKLHSTNHPNNLLKELNKCRLSETMCDVTILVGSRSFAAHKAVLACAAGYFQNLFLNTGLDAARTYVVDFITPANFEKILSFVYTSELFTDLINVGVIYEVAERLGMEDLLQACHSTFPDLESSAITKQPALAVGEGRAGPLSSTSSEQSHSLGDIRSGAEHFGPERSYLLHGDVAGGYKEDDRNPVGEASQALPLMHPQQPPKTEQESDPGQFAPVAGLGVQQGGNVVAQTTGSSCPQYKAQSNGDYSKGSFFPTDPSLDVSTGSNSCPSNSDHSKEQGFEQMDELQLEDLGEAELHFEDAGEELVPSEEVIELSDDSEEELAFESDSRDSKAMPCQVCKKVLEPNIQLIRQHARDHVDLLTGNCKVCETHFQDRNSRVTHVLSHIGIFLFSCDMCETKFFTQWQLTLHRRDGVFDNNVVVHPSDPLPGKVAVFGAGPSPELACAACGKPLAKDFHTVRNHLLEHVNLKSQTCGVCDQRHLSLCSLMWHALSHLGISVFSCSVCASSFVDRQLLEKHLAVHQHAEEALFQCHFCSQSFKLEAAYRYHVSQHKCGGSLDIRAGFGERLQPQGLPKRKLPEEFLSEELALQSQPGNSKYSCKVCGKRFAHTSEFNYHRRIHTGEKPYQCKVCHKFFRGRSTIKCHLRTHSGALMYRCTVCGHYSSTLNLMSKHIGVHKGSLPPDFTIEQTFMYIIHSKEAEKNTDS
SIO_010081: ZBTB39
subclass of: SO_0000673
so part of: ZBTB39
location: complement(771828..773957)
location: region:771828-773957:-1
so has part: feature:771828-773957:-1:exon

XP_005061440.1
type: Protein
SIO_000068: ncbiprotein

position:771828:-1
position: 771828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773957:-1
position: 773957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771828-773957:-1:exon

MYO1A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MYO1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(783595..798679)
location: region:783595-798679:-1
so has part: feature:783595-798679:-1:exon
subclass of: SO_0000010

101814318
type: Gene
SIO_000068: ncbigene

position:783595:-1
position: 783595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798679:-1
position: 798679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:783595-798679:-1:exon

MYO1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MYO1A
product: myosin IA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304991.1
SIO_010081: MYO1A
subclass of: SO_0000673
so part of: MYO1A
location: complement(join(783595..783897,784487..784569,784640..784792,784883..785015,785083..785189,785290..785424,785520..785594,785826..785912,786302..786370,786456..786605,786704..786797,787482..787682,788568..788794,789706..789906,790013..790075,790327..790431,790553..790618,790702..790788,790873..790991,791072..791219,791301..791404,791499..791597,791671..791734,791886..791932,792035..792139,792253..792347,792529..792657,797672..797792,798654..798679))
location: region:783595-798679:-1
so has part: feature:798654-798679:-1:exon
so has part: feature:797672-797792:-1:exon
so has part: feature:792529-792657:-1:exon
so has part: feature:792253-792347:-1:exon
so has part: feature:792035-792139:-1:exon
so has part: feature:791886-791932:-1:exon
so has part: feature:791671-791734:-1:exon
so has part: feature:791499-791597:-1:exon
so has part: feature:791301-791404:-1:exon
so has part: feature:791072-791219:-1:exon
so has part: feature:790873-790991:-1:exon
so has part: feature:790702-790788:-1:exon
so has part: feature:790553-790618:-1:exon
so has part: feature:790327-790431:-1:exon
so has part: feature:790013-790075:-1:exon
so has part: feature:789706-789906:-1:exon
so has part: feature:788568-788794:-1:exon
so has part: feature:787482-787682:-1:exon
so has part: feature:786704-786797:-1:exon
so has part: feature:786456-786605:-1:exon
so has part: feature:786302-786370:-1:exon
so has part: feature:785826-785912:-1:exon
so has part: feature:785520-785594:-1:exon
so has part: feature:785290-785424:-1:exon
so has part: feature:785083-785189:-1:exon
so has part: feature:784883-785015:-1:exon
so has part: feature:784640-784792:-1:exon
so has part: feature:784487-784569:-1:exon
so has part: feature:783595-783897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798654-798679:-1:exon

position:798654:-1
position: 798654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:797672-797792:-1:exon

position:797672:-1
position: 797672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797792:-1
position: 797792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792529-792657:-1:exon

position:792529:-1
position: 792529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792657:-1
position: 792657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792253-792347:-1:exon

position:792253:-1
position: 792253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792347:-1
position: 792347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:792035-792139:-1:exon

position:792035:-1
position: 792035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792139:-1
position: 792139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:791886-791932:-1:exon

position:791886:-1
position: 791886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791932:-1
position: 791932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:791671-791734:-1:exon

position:791671:-1
position: 791671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791734:-1
position: 791734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:791499-791597:-1:exon

position:791499:-1
position: 791499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791597:-1
position: 791597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:791301-791404:-1:exon

position:791301:-1
position: 791301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791404:-1
position: 791404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:791072-791219:-1:exon

position:791072:-1
position: 791072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791219:-1
position: 791219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:790873-790991:-1:exon

position:790873:-1
position: 790873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790991:-1
position: 790991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:790702-790788:-1:exon

position:790702:-1
position: 790702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790788:-1
position: 790788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:790553-790618:-1:exon

position:790553:-1
position: 790553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790618:-1
position: 790618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:790327-790431:-1:exon

position:790327:-1
position: 790327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790431:-1
position: 790431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:790013-790075:-1:exon

position:790013:-1
position: 790013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790075:-1
position: 790075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:789706-789906:-1:exon

position:789706:-1
position: 789706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789906:-1
position: 789906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:788568-788794:-1:exon

position:788568:-1
position: 788568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788794:-1
position: 788794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:787482-787682:-1:exon

position:787482:-1
position: 787482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787682:-1
position: 787682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:786704-786797:-1:exon

position:786704:-1
position: 786704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786797:-1
position: 786797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:786456-786605:-1:exon

position:786456:-1
position: 786456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786605:-1
position: 786605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:786302-786370:-1:exon

position:786302:-1
position: 786302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786370:-1
position: 786370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:785826-785912:-1:exon

position:785826:-1
position: 785826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785912:-1
position: 785912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:785520-785594:-1:exon

position:785520:-1
position: 785520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785594:-1
position: 785594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:785290-785424:-1:exon

position:785290:-1
position: 785290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785424:-1
position: 785424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:785083-785189:-1:exon

position:785083:-1
position: 785083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785189:-1
position: 785189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:784883-785015:-1:exon

position:784883:-1
position: 784883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785015:-1
position: 785015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:784640-784792:-1:exon

position:784640:-1
position: 784640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784792:-1
position: 784792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:784487-784569:-1:exon

position:784487:-1
position: 784487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784569:-1
position: 784569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:783595-783897:-1:exon

position:783897:-1
position: 783897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYO1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MYO1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Ia
translation: MEGSPSLLDAEAVADLVLLDPLTEESLVQTLQERFRRAVLQTYIGNVVISVNPYQALPIYTPEKVEEYHNCSFFAVKPHIYAIADDAYRSLRDRDRDQCILITGESGAGKTEASKLVMSYVAAVSSKGEEVNKVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVISNYLLEKSRIVRQVKGERNFHIFYQLLAGASPQLLQQLKLRQDCGHYGYLDRESSSLPGMDDAANFQAAQDAMRIIGFSPAEVTELLQVTAVVLKLGNVQLSSSFQASGMEACSITEPQELREICELIGLDPSTLEKALCTRTVKARDETVLTTLTVPQGYYGRDALAKNIYSRLFDWLVNRINASIQVKSDERRKAMGVLDIYGFEIFQDNGFEQFIINYCNEKLQQIFILMTLKEEQEEYVREGIQWTPVEFFDNSIICNLIENSTSGILAMLDEECLRPGVVNEDTFLTKLNQLLANHKHYESKETQNARRITDSSLPERCFRIHHYAGKVTYNVTGFIEKNNDLLFRDLSQAMWAARHALLRSLFPEGDPQKVSLKLPPTAGFQFKSSVAMLMKNLYSKNPNYIRCIKPNDTKSAMAFAPELVLAQARYLGLMENVRVRRAGYAFRQLYGPFLQRYKMLSRRTWPRWDGEDREGAEVLMAGLAFPAEELAFGHTKIFIRSPRTLFDLERQRQERVSELATLIQKMFRGWRCRTQYQLMRKSQILISAWFRGHRQKNRYKQMKRSALVLQAYARGWKSRRLLRELKAQRRRQAAATTIAAHWRGYQARRTYRKYFRSSASTRVANFIYRGLVQRYLLGLAKNLPPLAVTDRTWPPAPYRFLDKTNQELKNIFYHWKCKKYRDQLPAPRRAQLQAKLCASELFKDKKTLYPKSLQQPFRGDYLGLKQNPKYQKLHAVAKDKLVMADTVRKVNRANGKTVPRLLLLTTEHLVLADPKAAQPKTVLSIGDIRGVSVTRFSDGFLALHLKEISTVGAKGDFLLVSDHLIELVTRLHQPLMRGWAWACPLPTSPSSHSRFSTHFPKGDVSITVVESPKAATDGPVCRKKGSNKMEVLVH
SIO_010081: MYO1A
subclass of: SO_0000673
so part of: MYO1A
location: complement(join(783717..783897,784487..784569,784640..784792,784883..785015,785083..785189,785290..785424,785520..785594,785826..785912,786302..786370,786456..786605,786704..786797,787482..787682,788568..788794,789706..789906,790013..790075,790327..790431,790553..790618,790702..790788,790873..790991,791072..791219,791301..791404,791499..791597,791671..791734,791886..791932,792035..792139,792253..792347,792529..792657,797672..797781))
location: region:783717-797781:-1
so has part: feature:797672-797781:-1:exon
so has part: feature:792529-792657:-1:exon
so has part: feature:792253-792347:-1:exon
so has part: feature:792035-792139:-1:exon
so has part: feature:791886-791932:-1:exon
so has part: feature:791671-791734:-1:exon
so has part: feature:791499-791597:-1:exon
so has part: feature:791301-791404:-1:exon
so has part: feature:791072-791219:-1:exon
so has part: feature:790873-790991:-1:exon
so has part: feature:790702-790788:-1:exon
so has part: feature:790553-790618:-1:exon
so has part: feature:790327-790431:-1:exon
so has part: feature:790013-790075:-1:exon
so has part: feature:789706-789906:-1:exon
so has part: feature:788568-788794:-1:exon
so has part: feature:787482-787682:-1:exon
so has part: feature:786704-786797:-1:exon
so has part: feature:786456-786605:-1:exon
so has part: feature:786302-786370:-1:exon
so has part: feature:785826-785912:-1:exon
so has part: feature:785520-785594:-1:exon
so has part: feature:785290-785424:-1:exon
so has part: feature:785083-785189:-1:exon
so has part: feature:784883-785015:-1:exon
so has part: feature:784640-784792:-1:exon
so has part: feature:784487-784569:-1:exon
so has part: feature:783717-783897:-1:exon

XP_016160477.1
type: Protein
SIO_000068: ncbiprotein

position:783717:-1
position: 783717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797781:-1
position: 797781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797672-797781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792529-792657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792253-792347:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792035-792139:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:791886-791932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:791671-791734:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:791499-791597:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:791301-791404:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:791072-791219:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790873-790991:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:790702-790788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:790553-790618:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:790327-790431:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:790013-790075:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:789706-789906:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:788568-788794:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:787482-787682:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:786704-786797:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:786456-786605:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:786302-786370:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:785826-785912:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:785520-785594:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:785290-785424:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:785083-785189:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:784883-785015:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:784640-784792:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:784487-784569:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:783717-783897:-1:exon

NEMP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(799884..806170)
location: region:799884-806170:-1
so has part: feature:799884-806170:-1:exon
subclass of: SO_0000010

101814127
type: Gene
SIO_000068: ncbigene

position:799884:-1
position: 799884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806170:-1
position: 806170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:799884-806170:-1:exon

NEMP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NEMP1
product: nuclear envelope integral membrane protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061381.2
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: complement(join(799884..799965,800407..800627,800792..800974,801447..801672,802982..803093,803237..803330,803458..803530,803718..803928,805338..805459,806065..806170))
location: region:799884-806170:-1
so has part: feature:806065-806170:-1:exon
so has part: feature:805338-805459:-1:exon
so has part: feature:803718-803928:-1:exon
so has part: feature:803458-803530:-1:exon
so has part: feature:803237-803330:-1:exon
so has part: feature:802982-803093:-1:exon
so has part: feature:801447-801672:-1:exon
so has part: feature:800792-800974:-1:exon
so has part: feature:800407-800627:-1:exon
so has part: feature:799884-799965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806065-806170:-1:exon

position:806065:-1
position: 806065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:805338-805459:-1:exon

position:805338:-1
position: 805338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805459:-1
position: 805459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803718-803928:-1:exon

position:803718:-1
position: 803718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803928:-1
position: 803928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:803458-803530:-1:exon

position:803458:-1
position: 803458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803530:-1
position: 803530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:803237-803330:-1:exon

position:803237:-1
position: 803237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803330:-1
position: 803330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:802982-803093:-1:exon

position:802982:-1
position: 802982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803093:-1
position: 803093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:801447-801672:-1:exon

position:801447:-1
position: 801447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801672:-1
position: 801672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:800792-800974:-1:exon

position:800792:-1
position: 800792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800974:-1
position: 800974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:800407-800627:-1:exon

position:800407:-1
position: 800407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800627:-1
position: 800627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:799884-799965:-1:exon

position:799965:-1
position: 799965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEMP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NEMP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear envelope integral membrane protein 1
translation: MKPAPGRRRLPALPVLLFLLLFLPLLLLGAADTKNPIIPLREGHESQHEESQRFCYTNTRVPRWNDIWTRTQIHVTSSRMIRVTQVDSEEELERFSVWNVLFSFLRGKLNDTSIDVDLYSNKTCLKVELLEPGTTYSVLLFRRFDPKMFLVFFLGLLLFFCGDTLSRSQIFYYSAGISVGLLASLLVLVYMMSKVMPKKSPVYFLLVGGWSFSLYLLQLIFKNLRQICTYWRYLLGYLLLVGLLSFAVCYRYGPLENERSINLLSWALQLLGLLLMYSGIQIHPIALGLVLVAICTKNLDYPLQWAFAACRKIQSSRRSKLGPTPPRLLTEEEFRLQGEVETRRALAELRSSCQSPEFSAWTTVSRIQSPKRFAAFVGGASHVTPNEVSAHEEEFGLGRLYIDEELFEDDDDDDDDEEEEENIHDFSAGNHRSDSLPHNHLDVQ
SIO_010081: NEMP1
subclass of: SO_0000673
so part of: NEMP1
location: complement(join(800408..800627,800792..800974,801447..801672,802982..803093,803237..803330,803458..803530,803718..803928,805338..805459,806065..806158))
location: region:800408-806158:-1
so has part: feature:806065-806158:-1:exon
so has part: feature:805338-805459:-1:exon
so has part: feature:803718-803928:-1:exon
so has part: feature:803458-803530:-1:exon
so has part: feature:803237-803330:-1:exon
so has part: feature:802982-803093:-1:exon
so has part: feature:801447-801672:-1:exon
so has part: feature:800792-800974:-1:exon
so has part: feature:800408-800627:-1:exon

XP_005061438.1
type: Protein
SIO_000068: ncbiprotein

position:800408:-1
position: 800408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806158:-1
position: 806158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806065-806158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805338-805459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:803718-803928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:803458-803530:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803237-803330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802982-803093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:801447-801672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:800792-800974:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:800408-800627:-1:exon

NAB2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 809751..812719
location: region:809751-812719:1
so has part: feature:809751-812719:1:exon
subclass of: SO_0000010

101813785
type: Gene
SIO_000068: ncbigene

position:809751:1
position: 809751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812719:1
position: 812719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809751-812719:1:exon

NAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NAB2
product: NGFI-A binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016304963.1
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(809751..810297,810472..810921,811115..811248,811783..811834,811998..812130,812292..812492,812603..812719)
location: region:809751-812719:1
so has part: feature:809751-810297:1:exon
so has part: feature:810472-810921:1:exon
so has part: feature:811115-811248:1:exon
so has part: feature:811783-811834:1:exon
so has part: feature:811998-812130:1:exon
so has part: feature:812292-812492:1:exon
so has part: feature:812603-812719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809751-810297:1:exon

position:810297:1
position: 810297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:810472-810921:1:exon

position:810472:1
position: 810472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810921:1
position: 810921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:811115-811248:1:exon

position:811115:1
position: 811115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811248:1
position: 811248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:811783-811834:1:exon

position:811783:1
position: 811783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811834:1
position: 811834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:811998-812130:1:exon

position:811998:1
position: 811998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812130:1
position: 812130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:812292-812492:1:exon

position:812292:1
position: 812292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812492:1
position: 812492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:812603-812719:1:exon

position:812603:1
position: 812603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NAB2
product: NGFI-A binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016304964.1
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(809751..810156,810331..810921,811115..811248,811783..811834,811998..812130,812292..812492,812603..812719)
location: region:809751-812719:1
so has part: feature:809751-810156:1:exon
so has part: feature:810331-810921:1:exon
so has part: feature:811115-811248:1:exon
so has part: feature:811783-811834:1:exon
so has part: feature:811998-812130:1:exon
so has part: feature:812292-812492:1:exon
so has part: feature:812603-812719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809751-810156:1:exon

position:810156:1
position: 810156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:810331-810921:1:exon

position:810331:1
position: 810331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:811115-811248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811783-811834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811998-812130:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:812292-812492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812603-812719:1:exon

NAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NGFI-A-binding protein 2 isoform X1
translation: MALPRTLGELQLYRVLQRANLLGYYETFIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWASNPGLFSQPVSAVPVSSIPLFKLSEAGGRKALSNGHSSPGEAAGKGGGSAGTPPARSPTEPGEKLSPSAAPPWPGRSTPESEGGGDEEPGGPPFSPGGSSGEQAVGTELEPELARTVVESVERLLQSCPRGGEAELRALMKLNKKLAKAVGHIFQLEDGDRQKEEEIRRHSAIYGRGEARRREGKQLTLHELIINEAAAQFCLRDNSLLLRRVELFSLSRQVARESTYLSSLKVTRAHPEDSGAVVAKRLKQEVGEQSRPELLALPVGLEPPGAGYRASLEEDTGSLSGESLDGHLQGAGACPRLTPPPGAAPDVPLGLAPHGLWSRHILQQTLMDEGLRLARLVSHERVGRLSPCLPGKPPGPEFEDGLAERGPPAPPDPPRGTIKVEQETSRQ
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(809953..810297,810472..810921,811115..811248,811783..811834,811998..812130,812292..812492,812603..812697)
location: region:809953-812697:1
so has part: feature:809953-810297:1:exon
so has part: feature:810472-810921:1:exon
so has part: feature:811115-811248:1:exon
so has part: feature:811783-811834:1:exon
so has part: feature:811998-812130:1:exon
so has part: feature:812292-812492:1:exon
so has part: feature:812603-812697:1:exon

XP_016160449.1
type: Protein
SIO_000068: ncbiprotein

position:809953:1
position: 809953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812697:1
position: 812697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809953-810297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810472-810921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811115-811248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811783-811834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811998-812130:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:812292-812492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812603-812697:1:exon

NAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NGFI-A-binding protein 2 isoform X2
translation: MALPRTLGELQLYRVLQRANLLGYYETFIQQGGDDVQQLCEAGEEEFLEIMALVGMATKPLHVRRLQKALREWASNPGLFSQPVSAVPVSSIPLFKLSEAGGRKALSNGHSSPGEAAGKGGGSAGTPPARSPTEPGEKLSPSAAPPWPGRSTPESEGGGDEEPGGPPFSPGGSSGEQAVGTELEPELARTVVESVERLLQSCPRGGEAELRALMKLNKKLAKAVGHIFQLEDGDRQKEEEIRRHSAIYGRGEARRREGKQLTLHELIINEAAAQFCLRDNSLLLRRVELFSLSRQVARESTYLSSLKVTRAHPEDSGAVVAKRLKQEVGEQSRPELLALPVGLEPPGAGYRASLEEDTGSLSGESLDGHLQGAGACPRLTPPPGAAPDVPLGLAPHGLWSRHILQQTLMDEGLRLARLVSHERVGRLSPCLPGKPPGPEFEDGLAERGPPAPPDPPRGTIKVEQETSRQ
SIO_010081: NAB2
subclass of: SO_0000673
so part of: NAB2
location: join(809953..810156,810331..810921,811115..811248,811783..811834,811998..812130,812292..812492,812603..812697)
location: region:809953-812697:1
so has part: feature:809953-810156:1:exon
so has part: feature:810331-810921:1:exon
so has part: feature:811115-811248:1:exon
so has part: feature:811783-811834:1:exon
so has part: feature:811998-812130:1:exon
so has part: feature:812292-812492:1:exon
so has part: feature:812603-812697:1:exon

XP_016160450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:809953-810156:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:810331-810921:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:811115-811248:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811783-811834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811998-812130:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:812292-812492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812603-812697:1:exon

STAT6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: STAT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(814414..824447)
location: region:814414-824447:-1
so has part: feature:814414-824447:-1:exon
subclass of: SO_0000010

101813321
type: Gene
SIO_000068: ncbigene

position:814414:-1
position: 814414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824447:-1
position: 824447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814414-824447:-1:exon

STAT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: STAT6
product: signal transducer and activator of transcription 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005061378.2
SIO_010081: STAT6
subclass of: SO_0000673
so part of: STAT6
location: complement(join(814414..814799,814876..815022,815222..815287,815388..815489,815575..815700,815968..816037,816220..816366,816465..816601,816696..816790,816867..817073,817218..817310,817428..817550,817640..817727,817799..817987,818078..818209,818314..818618,818705..818788,820509..820647,820746..820875,824363..824389,824430..824447))
location: region:814414-824447:-1
so has part: feature:824430-824447:-1:exon
so has part: feature:824363-824389:-1:exon
so has part: feature:820746-820875:-1:exon
so has part: feature:820509-820647:-1:exon
so has part: feature:818705-818788:-1:exon
so has part: feature:818314-818618:-1:exon
so has part: feature:818078-818209:-1:exon
so has part: feature:817799-817987:-1:exon
so has part: feature:817640-817727:-1:exon
so has part: feature:817428-817550:-1:exon
so has part: feature:817218-817310:-1:exon
so has part: feature:816867-817073:-1:exon
so has part: feature:816696-816790:-1:exon
so has part: feature:816465-816601:-1:exon
so has part: feature:816220-816366:-1:exon
so has part: feature:815968-816037:-1:exon
so has part: feature:815575-815700:-1:exon
so has part: feature:815388-815489:-1:exon
so has part: feature:815222-815287:-1:exon
so has part: feature:814876-815022:-1:exon
so has part: feature:814414-814799:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:824430-824447:-1:exon

position:824430:-1
position: 824430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:824363-824389:-1:exon

position:824363:-1
position: 824363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824389:-1
position: 824389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:820746-820875:-1:exon

position:820746:-1
position: 820746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820875:-1
position: 820875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:820509-820647:-1:exon

position:820509:-1
position: 820509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820647:-1
position: 820647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:818705-818788:-1:exon

position:818705:-1
position: 818705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818788:-1
position: 818788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:818314-818618:-1:exon

position:818314:-1
position: 818314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818618:-1
position: 818618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:818078-818209:-1:exon

position:818078:-1
position: 818078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818209:-1
position: 818209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:817799-817987:-1:exon

position:817799:-1
position: 817799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817987:-1
position: 817987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:817640-817727:-1:exon

position:817640:-1
position: 817640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817727:-1
position: 817727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:817428-817550:-1:exon

position:817428:-1
position: 817428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817550:-1
position: 817550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:817218-817310:-1:exon

position:817218:-1
position: 817218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817310:-1
position: 817310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:816867-817073:-1:exon

position:816867:-1
position: 816867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817073:-1
position: 817073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:816696-816790:-1:exon

position:816696:-1
position: 816696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816790:-1
position: 816790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:816465-816601:-1:exon

position:816465:-1
position: 816465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816601:-1
position: 816601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:816220-816366:-1:exon

position:816220:-1
position: 816220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816366:-1
position: 816366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:815968-816037:-1:exon

position:815968:-1
position: 815968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816037:-1
position: 816037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:815575-815700:-1:exon

position:815575:-1
position: 815575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815700:-1
position: 815700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:815388-815489:-1:exon

position:815388:-1
position: 815388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815489:-1
position: 815489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:815222-815287:-1:exon

position:815222:-1
position: 815222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815287:-1
position: 815287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:814876-815022:-1:exon

position:814876:-1
position: 814876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815022:-1
position: 815022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:814414-814799:-1:exon

position:814799:-1
position: 814799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STAT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: STAT6
product: signal transducer and activator of transcription 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016304988.1
SIO_010081: STAT6
subclass of: SO_0000673
so part of: STAT6
location: complement(join(814414..814799,814876..815022,815222..815287,815388..815489,815575..815700,815968..816037,816220..816366,816465..816601,816696..816790,816867..817073,817218..817310,817428..817550,817640..817727,817799..817987,818078..818209,818314..818618,818705..818788,820509..820647,820746..820875,821584..821597))
location: region:814414-821597:-1
so has part: feature:821584-821597:-1:exon
so has part: feature:820746-820875:-1:exon
so has part: feature:820509-820647:-1:exon
so has part: feature:818705-818788:-1:exon
so has part: feature:818314-818618:-1:exon
so has part: feature:818078-818209:-1:exon
so has part: feature:817799-817987:-1:exon
so has part: feature:817640-817727:-1:exon
so has part: feature:817428-817550:-1:exon
so has part: feature:817218-817310:-1:exon
so has part: feature:816867-817073:-1:exon
so has part: feature:816696-816790:-1:exon
so has part: feature:816465-816601:-1:exon
so has part: feature:816220-816366:-1:exon
so has part: feature:815968-816037:-1:exon
so has part: feature:815575-815700:-1:exon
so has part: feature:815388-815489:-1:exon
so has part: feature:815222-815287:-1:exon
so has part: feature:814876-815022:-1:exon
so has part: feature:814414-814799:-1:exon

position:821597:-1
position: 821597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821584-821597:-1:exon

position:821584:-1
position: 821584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820746-820875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820509-820647:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:818705-818788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818314-818618:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:818078-818209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:817799-817987:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817640-817727:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:817428-817550:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:817218-817310:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:816867-817073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816696-816790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816465-816601:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:816220-816366:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815968-816037:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815575-815700:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:815388-815489:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:815222-815287:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:814876-815022:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:814414-814799:-1:exon

STAT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: STAT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer and activator of transcription 6
translation: MSLWNLVSHMPPEEFSSLSAEFPRSLRCLLAEWLENQPWEFINGSDAFCSSVASGMLSAMLEKLRSAAGSDGQQCQILQQISSIENTFCRDPLRLVAVVRSVLEGEKAAVLKRDHHLPLSFHRRQEELKFSLGLRRLQHRVREIQALRDEGPGRDGAAQSPMAPRELPNLILEAVKELEAAKQQVLKRIQIWKRQQQLAGNGAIFEENLAPLQKRCENLLEVYFQLQQQVMAASTELGPELLPRLLERFNEVLSSLVKSSFLVEKQPPQVLKTQTKFQASVRFLLGPRLLKAAPKPYVVRADMVTEKQARELELSNYSNSLSESTGEILHNTVALETNPTSGTCCANFKNVLLKKIKRCERKGSESVTEEKCAVLFSTNVALTPSNVSIHLQVLSLPIVVIVHGNQDNNAKATVLWDNAFSDIERVPFVVAERVPWDKMCDTLNLKFMAEVQTTKGLLKEHYFFLAQKIFNDHSASPEDFQSRHVSWAQFNKEILPGRGFTFWQWFDGVLDLTKRCLKSYWSDRLIMGFISKQYVCKLLSMKPDGTFLLRFSDSEIGGVTIAYVIRGKDGSSQVENIQPFSAKDLSIRSLGDRIRDLEQLRNLYPNTPKDQAFGSHYNKEQTGKDGRGYVSTAIKMTVESERDQQPPNTMGAPPEAPQVPMFNVPVLQHELHPESLQPLLAPMCPPTPFCSQPIPTVYPTVESSIMMAPDRLTSPFHSPSPMLSSPSLSHCQDPAFRPPGPFMPNQYMPGDVSQLLPAGPSAEAQDEEMPELPPFQAVEDASLQSPPRWMSPSMEQSSASELDQLLQDVPLLPPFAPLPQHSGYPNSSLSSWGLGEARWDDSMRPGHA
SIO_010081: STAT6
subclass of: SO_0000673
so part of: STAT6
location: complement(join(814619..814799,814876..815022,815222..815287,815388..815489,815575..815700,815968..816037,816220..816366,816465..816601,816696..816790,816867..817073,817218..817310,817428..817550,817640..817727,817799..817987,818078..818209,818314..818618,818705..818788,820509..820647,820746..820861))
location: region:814619-820861:-1
so has part: feature:820746-820861:-1:exon
so has part: feature:820509-820647:-1:exon
so has part: feature:818705-818788:-1:exon
so has part: feature:818314-818618:-1:exon
so has part: feature:818078-818209:-1:exon
so has part: feature:817799-817987:-1:exon
so has part: feature:817640-817727:-1:exon
so has part: feature:817428-817550:-1:exon
so has part: feature:817218-817310:-1:exon
so has part: feature:816867-817073:-1:exon
so has part: feature:816696-816790:-1:exon
so has part: feature:816465-816601:-1:exon
so has part: feature:816220-816366:-1:exon
so has part: feature:815968-816037:-1:exon
so has part: feature:815575-815700:-1:exon
so has part: feature:815388-815489:-1:exon
so has part: feature:815222-815287:-1:exon
so has part: feature:814876-815022:-1:exon
so has part: feature:814619-814799:-1:exon

XP_016160474.1
type: Protein
SIO_000068: ncbiprotein

position:814619:-1
position: 814619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820861:-1
position: 820861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820746-820861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820509-820647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:818705-818788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:818314-818618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818078-818209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:817799-817987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:817640-817727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817428-817550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:817218-817310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:816867-817073:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:816696-816790:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816465-816601:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816220-816366:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815968-816037:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815575-815700:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815388-815489:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:815222-815287:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:814876-815022:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:814619-814799:-1:exon

STAT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: STAT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal transducer and activator of transcription 6
translation: MSLWNLVSHMPPEEFSSLSAEFPRSLRCLLAEWLENQPWEFINGSDAFCSSVASGMLSAMLEKLRSAAGSDGQQCQILQQISSIENTFCRDPLRLVAVVRSVLEGEKAAVLKRDHHLPLSFHRRQEELKFSLGLRRLQHRVREIQALRDEGPGRDGAAQSPMAPRELPNLILEAVKELEAAKQQVLKRIQIWKRQQQLAGNGAIFEENLAPLQKRCENLLEVYFQLQQQVMAASTELGPELLPRLLERFNEVLSSLVKSSFLVEKQPPQVLKTQTKFQASVRFLLGPRLLKAAPKPYVVRADMVTEKQARELELSNYSNSLSESTGEILHNTVALETNPTSGTCCANFKNVLLKKIKRCERKGSESVTEEKCAVLFSTNVALTPSNVSIHLQVLSLPIVVIVHGNQDNNAKATVLWDNAFSDIERVPFVVAERVPWDKMCDTLNLKFMAEVQTTKGLLKEHYFFLAQKIFNDHSASPEDFQSRHVSWAQFNKEILPGRGFTFWQWFDGVLDLTKRCLKSYWSDRLIMGFISKQYVCKLLSMKPDGTFLLRFSDSEIGGVTIAYVIRGKDGSSQVENIQPFSAKDLSIRSLGDRIRDLEQLRNLYPNTPKDQAFGSHYNKEQTGKDGRGYVSTAIKMTVESERDQQPPNTMGAPPEAPQVPMFNVPVLQHELHPESLQPLLAPMCPPTPFCSQPIPTVYPTVESSIMMAPDRLTSPFHSPSPMLSSPSLSHCQDPAFRPPGPFMPNQYMPGDVSQLLPAGPSAEAQDEEMPELPPFQAVEDASLQSPPRWMSPSMEQSSASELDQLLQDVPLLPPFAPLPQHSGYPNSSLSSWGLGEARWDDSMRPGHA
SIO_010081: STAT6
subclass of: SO_0000673
so part of: STAT6
location: complement(join(814619..814799,814876..815022,815222..815287,815388..815489,815575..815700,815968..816037,816220..816366,816465..816601,816696..816790,816867..817073,817218..817310,817428..817550,817640..817727,817799..817987,818078..818209,818314..818618,818705..818788,820509..820647,820746..820861))
location: region:814619-820861:-1
so has part: feature:820746-820861:-1:exon
so has part: feature:820509-820647:-1:exon
so has part: feature:818705-818788:-1:exon
so has part: feature:818314-818618:-1:exon
so has part: feature:818078-818209:-1:exon
so has part: feature:817799-817987:-1:exon
so has part: feature:817640-817727:-1:exon
so has part: feature:817428-817550:-1:exon
so has part: feature:817218-817310:-1:exon
so has part: feature:816867-817073:-1:exon
so has part: feature:816696-816790:-1:exon
so has part: feature:816465-816601:-1:exon
so has part: feature:816220-816366:-1:exon
so has part: feature:815968-816037:-1:exon
so has part: feature:815575-815700:-1:exon
so has part: feature:815388-815489:-1:exon
so has part: feature:815222-815287:-1:exon
so has part: feature:814876-815022:-1:exon
so has part: feature:814619-814799:-1:exon

XP_005061435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:820746-820861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820509-820647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:818705-818788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:818314-818618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818078-818209:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:817799-817987:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:817640-817727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:817428-817550:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:817218-817310:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:816867-817073:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:816696-816790:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816465-816601:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816220-816366:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815968-816037:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815575-815700:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:815388-815489:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:815222-815287:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:814876-815022:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:814619-814799:-1:exon

LRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <836960..975258
location: region:836960-975258:1
so has part: feature:836960-975258:1:exon
subclass of: SO_0000010

101820048
type: Gene
SIO_000068: ncbigene

position:836960:1
position: 836960
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:975258:1
position: 975258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836960-975258:1:exon

LRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LRP1
product: LDL receptor related protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304935.1
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
location: join(<836960..837017,848648..848770,855064..855201,857014..857133,858215..858343,858457..858720,892243..892405,893176..893398,893602..893791,898777..898920,899035..899271,900078..900258,900358..900580,901717..901906,902594..902719,904565..904705,906284..906409,906579..906695,906797..906877,910050..910217,910628..910810,911234..911434,912463..912490,912550..912767,912895..913092,914252..914456,914535..914699,914963..915207,915711..915842,916443..916670,916778..916952,917549..917643,918279..918428,918535..918675,919292..919420,921915..922046,922270..922404,922486..922615,923019..923145,923314..923465,923550..923674,923851..923983,924581..924819,928544..928733,929601..929805,931000..931192,931869..931994,932945..933070,933889..934008,934617..934730,935062..935211,935445..935579,936445..936561,937306..937536,939025..939165,939247..939434,939891..940074,940287..940372,940816..940935,941450..941637,942018..942223,942817..943005,943161..943309,944628..944721,944984..945100,945181..945300,945735..945857,946743..946868,949184..949300,950946..951006,951074..951119,951232..951364,952843..952962,953915..954037,954239..954382,954460..954594,954777..954896,955191..955462,956632..956810,957004..957110,957311..957427,957510..957686,958019..958159,960017..960190,960263..960401,963025..963113,963547..963634,963738..963919,975062..975258)
location: region:836960-975258:1
so has part: feature:836960-837017:1:exon
so has part: feature:848648-848770:1:exon
so has part: feature:855064-855201:1:exon
so has part: feature:857014-857133:1:exon
so has part: feature:858215-858343:1:exon
so has part: feature:858457-858720:1:exon
so has part: feature:892243-892405:1:exon
so has part: feature:893176-893398:1:exon
so has part: feature:893602-893791:1:exon
so has part: feature:898777-898920:1:exon
so has part: feature:899035-899271:1:exon
so has part: feature:900078-900258:1:exon
so has part: feature:900358-900580:1:exon
so has part: feature:901717-901906:1:exon
so has part: feature:902594-902719:1:exon
so has part: feature:904565-904705:1:exon
so has part: feature:906284-906409:1:exon
so has part: feature:906579-906695:1:exon
so has part: feature:906797-906877:1:exon
so has part: feature:910050-910217:1:exon
so has part: feature:910628-910810:1:exon
so has part: feature:911234-911434:1:exon
so has part: feature:912463-912490:1:exon
so has part: feature:912550-912767:1:exon
so has part: feature:912895-913092:1:exon
so has part: feature:914252-914456:1:exon
so has part: feature:914535-914699:1:exon
so has part: feature:914963-915207:1:exon
so has part: feature:915711-915842:1:exon
so has part: feature:916443-916670:1:exon
so has part: feature:916778-916952:1:exon
so has part: feature:917549-917643:1:exon
so has part: feature:918279-918428:1:exon
so has part: feature:918535-918675:1:exon
so has part: feature:919292-919420:1:exon
so has part: feature:921915-922046:1:exon
so has part: feature:922270-922404:1:exon
so has part: feature:922486-922615:1:exon
so has part: feature:923019-923145:1:exon
so has part: feature:923314-923465:1:exon
so has part: feature:923550-923674:1:exon
so has part: feature:923851-923983:1:exon
so has part: feature:924581-924819:1:exon
so has part: feature:928544-928733:1:exon
so has part: feature:929601-929805:1:exon
so has part: feature:931000-931192:1:exon
so has part: feature:931869-931994:1:exon
so has part: feature:932945-933070:1:exon
so has part: feature:933889-934008:1:exon
so has part: feature:934617-934730:1:exon
so has part: feature:935062-935211:1:exon
so has part: feature:935445-935579:1:exon
so has part: feature:936445-936561:1:exon
so has part: feature:937306-937536:1:exon
so has part: feature:939025-939165:1:exon
so has part: feature:939247-939434:1:exon
so has part: feature:939891-940074:1:exon
so has part: feature:940287-940372:1:exon
so has part: feature:940816-940935:1:exon
so has part: feature:941450-941637:1:exon
so has part: feature:942018-942223:1:exon
so has part: feature:942817-943005:1:exon
so has part: feature:943161-943309:1:exon
so has part: feature:944628-944721:1:exon
so has part: feature:944984-945100:1:exon
so has part: feature:945181-945300:1:exon
so has part: feature:945735-945857:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:836960-837017:1:exon

position:837017:1
position: 837017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:848648-848770:1:exon

position:848648:1
position: 848648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:848770:1
position: 848770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:855064-855201:1:exon

position:855064:1
position: 855064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855201:1
position: 855201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:857014-857133:1:exon

position:857014:1
position: 857014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857133:1
position: 857133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:858215-858343:1:exon

position:858215:1
position: 858215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858343:1
position: 858343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858457-858720:1:exon

position:858457:1
position: 858457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858720:1
position: 858720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:892243-892405:1:exon

position:892243:1
position: 892243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892405:1
position: 892405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:893176-893398:1:exon

position:893176:1
position: 893176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893398:1
position: 893398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:893602-893791:1:exon

position:893602:1
position: 893602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893791:1
position: 893791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:898777-898920:1:exon

position:898777:1
position: 898777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898920:1
position: 898920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:899035-899271:1:exon

position:899035:1
position: 899035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899271:1
position: 899271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:900078-900258:1:exon

position:900078:1
position: 900078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900258:1
position: 900258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:900358-900580:1:exon

position:900358:1
position: 900358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900580:1
position: 900580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:901717-901906:1:exon

position:901717:1
position: 901717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901906:1
position: 901906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:902594-902719:1:exon

position:902594:1
position: 902594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902719:1
position: 902719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:904565-904705:1:exon

position:904565:1
position: 904565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904705:1
position: 904705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:906284-906409:1:exon

position:906284:1
position: 906284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906409:1
position: 906409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:906579-906695:1:exon

position:906579:1
position: 906579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906695:1
position: 906695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:906797-906877:1:exon

position:906797:1
position: 906797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906877:1
position: 906877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:910050-910217:1:exon

position:910050:1
position: 910050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910217:1
position: 910217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:910628-910810:1:exon

position:910628:1
position: 910628
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LRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolow-density lipoprotein receptor-related protein 1
translation: LYRSRTDGTFHRAGPALPGAPKTCSPKQFACKDQITCISKGWRCDGEKDCPDGSDESPEICPQSKVSRCQPNEHNCLGTELCIPMGKLCNGLHDCFDGSDEGPHCREQLANCSALDCQHHCAPTLSGPVCYCNHSFQLAEDRRSCRDFDECTVYGTCSQTCSNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRPPVLLIANSQNILATYLSGTPVPNITPTSAKQTTAMDFNYVEDTVCWVHVGDSASQTILKCARIPNLKGFVEERSINISLSLHHVEQMAIDWLTGNFYFVDDIDDRIFVCNKNGDTCVTLLDLELYNPKGIALDPAMGKVFFTDYGQIPKVERCDMDGQNRTKLVDSKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTIIQGILIEHLYGLTVFENYLYATNSDNANAQQKTSVIRVNRFNSTEYQVVTRVDKGGALHIYHQRRQPTVRSHACEPDQFGKPGGCSDICLLGNSHKSRTCRCRSGFSLGSDGKSCKKPEHELFLVYGKGRPGIIRGMDMGAKVPDEHMIPIENLMNPRALDFHAETGFIYFADTTSYLIGRQKIDGTERETILKDGIHNVEGIAVDWMGNNLYWTDDGPKKTISVARLEKAAQTRKTLIEGKMTHPRAIVVDPLNGWMYWTDWEEDPKDSKRGKIERAWMDGSNRNVFITSKTVLWPNGLSLDIPAKILYWVDAFYDRIEMVYLNGTERKMVYEGPELNHAFGLCHYSNFLFWTEYRSGSIYRLDQPSKGVTLLRNERPPIFEIRMYDAQQQQVGSNKCRVNNGGCSSLCLATPRGRQCACAEDQILGSDSVTCEANPSYIPPPQCQPGEFACKNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCKNNRCIPNRWLCDGDNDCGNNEDESNSTCSARTCSPNQFSCASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCSHSCSSNQFKCNSGRCIPVHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPMRWRCDGDTDCMDSSDEKNCEGVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCEDNSDEENCESLVCKPPSHTCANNTSICLPPEKLCDGSDDCGDGSDEGELCDQCSLNNGGCSHNCTVAPGEGIVCSCPLGMELSADNKTCQIQSYCAKHLKCSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDPFKPFIIFSNRHEIRRIDLHRGDYSVLVPGLRNTIALDFHLNQSSLYWTDVVEDKIYRGKLLENGALTSFEVVIQYGLATPEGLAVDWIAGNIYWVESNLDQIEVAKLDGTMRTTLLAGDIEHPRAIALDPRYGILFWTDWDASLPRIEAASMSGEGRRTIHKETGSGGWPNGLTVDYLEKRILWIDARSDAIYSALYDGTGHIEVLRGHEYLSHPFAVTLYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTNTQPFDLQVYHPSRQPLAPNPCEANGGKGPCSHLCLINYNRTLSCACPHLMKLDKDNTTCYEFKKFLLYARQMEIRGVDIDNPYYNYIISFTVPDIDNVTVVDYDALEQRIYWSDVRTQTIKRAFINGTGVETVVSADLPNAHGLSVDWVSRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVVHPLRGKLYWTDGDNISVANMDGSNRTLLFTNQKGPVGLAIDYPESKLYWISSGNGTINRCDLDGSNLEVLESVRSQLSKATALAIMGDKLWWADQASERMGTCNKKDGTEVTVLRNSTTLVMHMKVYDESIQQAGTNPCSQNNGDCSQLCLPTSETSRSCMCTAGYSLKSGQQSCEGVGSFLLYSVHEGIRGIPLDPSDKSDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTNGIGRVEGIAVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDK…
SIO_010081: LRP1
subclass of: SO_0000673
so part of: LRP1
location: join(<836960..837017,848648..848770,855064..855201,857014..857133,858215..858343,858457..858720,892243..892405,893176..893398,893602..893791,898777..898920,899035..899271,900078..900258,900358..900580,901717..901906,902594..902719,904565..904705,906284..906409,906579..906695,906797..906877,910050..910217,910628..910810,911234..911434,912463..912490,912550..912767,912895..913092,914252..914456,914535..914699,914963..915207,915711..915842,916443..916670,916778..916952,917549..917643,918279..918428,918535..918675,919292..919420,921915..922046,922270..922404,922486..922615,923019..923145,923314..923465,923550..923674,923851..923983,924581..924819,928544..928733,929601..929805,931000..931192,931869..931994,932945..933070,933889..934008,934617..934730,935062..935211,935445..935579,936445..936561,937306..937536,939025..939165,939247..939434,939891..940074,940287..940372,940816..940935,941450..941637,942018..942223,942817..943005,943161..943309,944628..944721,944984..945100,945181..945300,945735..945857,946743..946868,949184..949300,950946..951006,951074..951119,951232..951364,952843..952962,953915..954037,954239..954382,954460..954594,954777..954896,955191..955462,956632..956810,957004..957110,957311..957427,957510..957686,958019..958159,960017..960190,960263..960401,963025..963113,963547..963634,963738..963919,975062..975258)
location: region:836960-975258:1
so has part: feature:836960-837017:1:exon
so has part: feature:848648-848770:1:exon
so has part: feature:855064-855201:1:exon
so has part: feature:857014-857133:1:exon
so has part: feature:858215-858343:1:exon
so has part: feature:858457-858720:1:exon
so has part: feature:892243-892405:1:exon
so has part: feature:893176-893398:1:exon
so has part: feature:893602-893791:1:exon
so has part: feature:898777-898920:1:exon
so has part: feature:899035-899271:1:exon
so has part: feature:900078-900258:1:exon
so has part: feature:900358-900580:1:exon
so has part: feature:901717-901906:1:exon
so has part: feature:902594-902719:1:exon
so has part: feature:904565-904705:1:exon
so has part: feature:906284-906409:1:exon
so has part: feature:906579-906695:1:exon
so has part: feature:906797-906877:1:exon
so has part: feature:910050-910217:1:exon
so has part: feature:910628-910810:1:exon
so has part: feature:911234-911434:1:exon
so has part: feature:912463-912490:1:exon
so has part: feature:912550-912767:1:exon
so has part: feature:912895-913092:1:exon
so has part: feature:914252-914456:1:exon
so has part: feature:914535-914699:1:exon
so has part: feature:914963-915207:1:exon
so has part: feature:915711-915842:1:exon
so has part: feature:916443-916670:1:exon
so has part: feature:916778-916952:1:exon
so has part: feature:917549-917643:1:exon
so has part: feature:918279-918428:1:exon
so has part: feature:918535-918675:1:exon
so has part: feature:919292-919420:1:exon
so has part: feature:921915-922046:1:exon
so has part: feature:922270-922404:1:exon
so has part: feature:922486-922615:1:exon
so has part: feature:923019-923145:1:exon
so has part: feature:923314-923465:1:exon
so has part: feature:923550-923674:1:exon
so has part: feature:923851-923983:1:exon
so has part: feature:924581-924819:1:exon
so has part: feature:928544-928733:1:exon
so has part: feature:929601-929805:1:exon
so has part: feature:931000-931192:1:exon
so has part: feature:931869-931994:1:exon
so has part: feature:932945-933070:1:exon
so has part: feature:933889-934008:1:exon
so has part: feature:934617-934730:1:exon
so has part: feature:935062-935211:1:exon
so has part: feature:935445-935579:1:exon
so has part: feature:936445-936561:1:exon
so has part: feature:937306-937536:1:exon
so has part: feature:939025-939165:1:exon
so has part: feature:939247-939434:1:exon
so has part: feature:939891-940074:1:exon
so has part: feature:940287-940372:1:exon
so has part: feature:940816-940935:1:exon
so has part: feature:941450-941637:1:exon
so has part: feature:942018-942223:1:exon
so has part: feature:942817-943005:1:exon
so has part: feature:943161-943309:1:exon
so has part: feature:944628-944721:1:exon
so has part: feature:944984-945100:1:exon
so has part: feature:945181-945300:1:exon

XP_016160421.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:836960-837017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:848648-848770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855064-855201:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857014-857133:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858215-858343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858457-858720:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:892243-892405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:893176-893398:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:893602-893791:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:898777-898920:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899035-899271:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:900078-900258:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:900358-900580:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:901717-901906:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:902594-902719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:904565-904705:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906284-906409:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906579-906695:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:906797-906877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:910050-910217:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:910628-910810:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:911234-911434:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:912463-912490:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:912550-912767:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:912895-913092:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:914252-914456:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:914535-914699:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:914963-915207:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:915711-915842:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:916443-916670:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:916778-916952:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:917549-917643:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:918279-918428:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:918535-918675:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:919292-919420:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:921915-922046:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:922270-922404:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:922486-922615:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:923019-923145:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:923314-923465:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:923550-923674:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:923851-923983:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:924581-924819:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:928544-928733:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:929601-929805:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:931000-931192:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:931869-931994:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:932945-933070:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:933889-934008:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:934617-934730:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:935062-935211:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:935445-935579:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:936445-936561:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:937306-937536:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:939025-939165:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:939247-939434:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:939891-940074:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:940287-940372:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:940816-940935:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:941450-941637:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:942018-942223:1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:942817-943005:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:943161-943309:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:944628-944721:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:944984-945100:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:945181-945300:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:945735-945857:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:946743-946868:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:949184-949300:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:950946-951006:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:951074-951119:1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:951232-951364:1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:952843-952962:1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:953915-954037:1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:954239-954382:1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:954460-954594:1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:954777-954896:1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:955191-955462:1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:956632-956810:1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:957004-957110:1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:957311-957427:1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:957510-957686:1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:958019-958159:1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:960017-960190:1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:960263-960401:1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:963025-963113:1:exon

urn:…
SIO_000300: 87
SIO_000628: feature:963547-963634:1:exon

urn:…
SIO_000300: 88
SIO_000628: feature:963738-963919:1:exon

urn:…
SIO_000300: 89
SIO_000628: feature:975062-975258:1:exon

NXPH4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NXPH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 976607..992442
location: region:976607-992442:1
so has part: feature:976607-992442:1:exon
subclass of: SO_0000010

101819852
type: Gene
SIO_000068: ncbigene

position:976607:1
position: 976607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992442:1
position: 992442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976607-992442:1:exon

NXPH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NXPH4
product: neurexophilin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304937.1
SIO_010081: NXPH4
subclass of: SO_0000673
so part of: NXPH4
location: join(976607..976612,977136..977267,979157..979309,988339..988423,989455..989565,990916..991270,991342..992442)
location: region:976607-992442:1
so has part: feature:976607-976612:1:exon
so has part: feature:977136-977267:1:exon
so has part: feature:979157-979309:1:exon
so has part: feature:988339-988423:1:exon
so has part: feature:989455-989565:1:exon
so has part: feature:990916-991270:1:exon
so has part: feature:991342-992442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:976607-976612:1:exon

position:976612:1
position: 976612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977136-977267:1:exon

position:977136:1
position: 977136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977267:1
position: 977267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:979157-979309:1:exon

position:979157:1
position: 979157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979309:1
position: 979309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:988339-988423:1:exon

position:988339:1
position: 988339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988423:1
position: 988423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:989455-989565:1:exon

position:989455:1
position: 989455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989565:1
position: 989565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:990916-991270:1:exon

position:990916:1
position: 990916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991270:1
position: 991270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:991342-992442:1:exon

position:991342:1
position: 991342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NXPH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NXPH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurexophilin-4
translation: MPLGDSIRLEPGAWLAQPQRGGGAVPGEGAHPGVPPSQTHPPLRFPGRGGTVLGGTGDVGGPCWLHFLSPHTTPRELPVSPRALRSVTGGAQEEPPQPLALSRTSLAWGSAAPGGTVVLPVSVPLWRPCTETCLATEEGAWGAHGTPIIPDGDHSQAGNGMQGGGRQEDEVEGCTQTDEEGIVVGGRGGCTQSDEEGHRHSSCSLCSLPQTVCAGGHVAKTLGYLEMGTSGLLKDVPYGTLKPPVLSPGRLIPAEPPRGAGTALGTGRSPWDWQKNQTAGDPPGELLNPRAHRKPTLKSSRAKKIFGWGDFYFNIKTLKFSLLVTGKIVDHINGTFSVYFRHNSSSLGNVSVSIVPPSKAVGFEVLVPGPPALPRPPPPPQQSTLPEGRPAKALNCHVEYEKTNRARKNKPCLYDPSKVCFTEHTQSHAAWLCAKPFKVICIFISFLSIDYKLVQKVCPDYNFQHDNPYFG
SIO_010081: NXPH4
subclass of: SO_0000673
so part of: NXPH4
location: join(976607..976612,977136..977267,979157..979309,988339..988423,989455..989565,990916..991270,991342..991915)
location: region:976607-991915:1
so has part: feature:976607-976612:1:exon
so has part: feature:977136-977267:1:exon
so has part: feature:979157-979309:1:exon
so has part: feature:988339-988423:1:exon
so has part: feature:989455-989565:1:exon
so has part: feature:990916-991270:1:exon
so has part: feature:991342-991915:1:exon

XP_016160423.1
type: Protein
SIO_000068: ncbiprotein

position:991915:1
position: 991915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976607-976612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977136-977267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979157-979309:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:988339-988423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:989455-989565:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:990916-991270:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:991342-991915:1:exon

SHMT2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SHMT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 996225..1014044
location: region:996225-1014044:1
so has part: feature:996225-1014044:1:exon
subclass of: SO_0000010

101819654
type: Gene
SIO_000068: ncbigene

position:996225:1
position: 996225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014044:1
position: 1014044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996225-1014044:1:exon

SHMT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SHMT2
product: serine hydroxymethyltransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061408.1
SIO_010081: SHMT2
subclass of: SO_0000673
so part of: SHMT2
location: join(996225..996267,996379..996442,1002070..1002151,1003151..1003273,1003939..1004078,1006753..1006918,1010722..1010821,1010934..1011089,1011974..1012081,1013875..1014044)
location: region:996225-1014044:1
so has part: feature:996225-996267:1:exon
so has part: feature:996379-996442:1:exon
so has part: feature:1002070-1002151:1:exon
so has part: feature:1003151-1003273:1:exon
so has part: feature:1003939-1004078:1:exon
so has part: feature:1006753-1006918:1:exon
so has part: feature:1010722-1010821:1:exon
so has part: feature:1010934-1011089:1:exon
so has part: feature:1011974-1012081:1:exon
so has part: feature:1013875-1014044:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:996225-996267:1:exon

position:996267:1
position: 996267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:996379-996442:1:exon

position:996379:1
position: 996379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996442:1
position: 996442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002070-1002151:1:exon

position:1002070:1
position: 1002070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002151:1
position: 1002151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1003151-1003273:1:exon

position:1003151:1
position: 1003151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003273:1
position: 1003273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1003939-1004078:1:exon

position:1003939:1
position: 1003939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004078:1
position: 1004078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1006753-1006918:1:exon

position:1006753:1
position: 1006753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006918:1
position: 1006918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1010722-1010821:1:exon

position:1010722:1
position: 1010722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010821:1
position: 1010821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1010934-1011089:1:exon

position:1010934:1
position: 1010934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011089:1
position: 1011089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1011974-1012081:1:exon

position:1011974:1
position: 1011974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012081:1
position: 1012081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1013875-1014044:1:exon

position:1013875:1
position: 1013875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHMT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SHMT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine hydroxymethyltransferase, mitochondrial
translation: MGDIRIGDPRIRDGGLRIGGAGVKYPKIRDGGAGMSLTHGYMTDAKRISATSIFFESMPYKLDPSTGLIDYAQLEVTARLFRPRLVIAGTSAYARLIDYARIKRVCEEVKAYLLADMAHISGLVAAKAIPSPFEHADVVTSTTHKTLRGARSGLIFYRKGVRSVDKKTGKETLYDLEDRINFSVFPSLQGGPHNHTIAAVAVALKQASSPAFREYCQQVLRNAKAMAQALLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDRSALTPGGLRLGAPALTSRQFREEDFQKVVEFIDEGITLALDVKSKTSKLQDFKAFLLQDPETQRRLGDLRQRVETFARAFPMPGFSDH
SIO_010081: SHMT2
subclass of: SO_0000673
so part of: SHMT2
location: join(996225..996267,996379..996442,1002070..1002151,1003151..1003273,1003939..1004078,1006753..1006918,1010722..1010821,1010934..1011089,1011974..1012081,1013875..1014002)
location: region:996225-1014002:1
so has part: feature:996225-996267:1:exon
so has part: feature:996379-996442:1:exon
so has part: feature:1002070-1002151:1:exon
so has part: feature:1003151-1003273:1:exon
so has part: feature:1003939-1004078:1:exon
so has part: feature:1006753-1006918:1:exon
so has part: feature:1010722-1010821:1:exon
so has part: feature:1010934-1011089:1:exon
so has part: feature:1011974-1012081:1:exon
so has part: feature:1013875-1014002:1:exon

XP_005061465.1
type: Protein
SIO_000068: ncbiprotein

position:1014002:1
position: 1014002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996225-996267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:996379-996442:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002070-1002151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003151-1003273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003939-1004078:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006753-1006918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1010722-1010821:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1010934-1011089:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1011974-1012081:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1013875-1014002:1:exon

R3HDM2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1030641..1095126)
location: region:1030641-1095126:-1
so has part: feature:1030641-1095126:-1:exon
subclass of: SO_0000010

101819272
type: Gene
SIO_000068: ncbigene

position:1030641:-1
position: 1030641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1095126:-1
position: 1095126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030641-1095126:-1:exon

R3HDM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: R3HDM2
product: R3H domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304938.1
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: complement(join(1030641..1030835,1048118..1048218,1049352..1049436,1051313..1051392,1052034..1052134,1054140..1054294,1054539..1054774,1055156..1055282,1055773..1056015,1056451..1056540,1059538..1059695,1062523..1062645,1062712..1062818,1072855..1072883,1074193..1074288,1075550..1075658,1077115..1077255,1077402..1077461,1078062..1078140,1079746..1079872,1080080..1080166,1080640..1080681,1085446..1085644,1094922..1095126))
location: region:1030641-1095126:-1
so has part: feature:1094922-1095126:-1:exon
so has part: feature:1085446-1085644:-1:exon
so has part: feature:1080640-1080681:-1:exon
so has part: feature:1080080-1080166:-1:exon
so has part: feature:1079746-1079872:-1:exon
so has part: feature:1078062-1078140:-1:exon
so has part: feature:1077402-1077461:-1:exon
so has part: feature:1077115-1077255:-1:exon
so has part: feature:1075550-1075658:-1:exon
so has part: feature:1074193-1074288:-1:exon
so has part: feature:1072855-1072883:-1:exon
so has part: feature:1062712-1062818:-1:exon
so has part: feature:1062523-1062645:-1:exon
so has part: feature:1059538-1059695:-1:exon
so has part: feature:1056451-1056540:-1:exon
so has part: feature:1055773-1056015:-1:exon
so has part: feature:1055156-1055282:-1:exon
so has part: feature:1054539-1054774:-1:exon
so has part: feature:1054140-1054294:-1:exon
so has part: feature:1052034-1052134:-1:exon
so has part: feature:1051313-1051392:-1:exon
so has part: feature:1049352-1049436:-1:exon
so has part: feature:1048118-1048218:-1:exon
so has part: feature:1030641-1030835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1094922-1095126:-1:exon

position:1094922:-1
position: 1094922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1085446-1085644:-1:exon

position:1085446:-1
position: 1085446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085644:-1
position: 1085644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1080640-1080681:-1:exon

position:1080640:-1
position: 1080640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080681:-1
position: 1080681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080080-1080166:-1:exon

position:1080080:-1
position: 1080080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080166:-1
position: 1080166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1079746-1079872:-1:exon

position:1079746:-1
position: 1079746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079872:-1
position: 1079872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1078062-1078140:-1:exon

position:1078062:-1
position: 1078062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078140:-1
position: 1078140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1077402-1077461:-1:exon

position:1077402:-1
position: 1077402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077461:-1
position: 1077461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1077115-1077255:-1:exon

position:1077115:-1
position: 1077115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077255:-1
position: 1077255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1075550-1075658:-1:exon

position:1075550:-1
position: 1075550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075658:-1
position: 1075658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1074193-1074288:-1:exon

position:1074193:-1
position: 1074193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074288:-1
position: 1074288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1072855-1072883:-1:exon

position:1072855:-1
position: 1072855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072883:-1
position: 1072883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1062712-1062818:-1:exon

position:1062712:-1
position: 1062712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062818:-1
position: 1062818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1062523-1062645:-1:exon

position:1062523:-1
position: 1062523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062645:-1
position: 1062645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1059538-1059695:-1:exon

position:1059538:-1
position: 1059538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059695:-1
position: 1059695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1056451-1056540:-1:exon

position:1056451:-1
position: 1056451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056540:-1
position: 1056540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1055773-1056015:-1:exon

position:1055773:-1
position: 1055773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056015:-1
position: 1056015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1055156-1055282:-1:exon

position:1055156:-1
position: 1055156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055282:-1
position: 1055282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1054539-1054774:-1:exon

position:1054539:-1
position: 1054539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054774:-1
position: 1054774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1054140-1054294:-1:exon

position:1054140:-1
position: 1054140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054294:-1
position: 1054294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1052034-1052134:-1:exon

position:1052034:-1
position: 1052034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052134:-1
position: 1052134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1051313-1051392:-1:exon

position:1051313:-1
position: 1051313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051392:-1
position: 1051392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1049352-1049436:-1:exon

position:1049352:-1
position: 1049352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049436:-1
position: 1049436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1048118-1048218:-1:exon

position:1048118:-1
position: 1048118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048218:-1
position: 1048218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1030641-1030835:-1:exon

position:1030835:-1
position: 1030835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

R3HDM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: R3HDM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: R3H domain-containing protein 2
translation: MSNSNTAQESLEIMKESEKKVVEESVNKTKYVSRSPSKEEVEKEGGEELSVRQESQKRTSGHGHARKRAKSNSKLKLVRSLAVCEESSGPFVDGLLESQDIIQLHVSCPSDKEEEKSTKDGVEKEEKEKNKEKTPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFISDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNAEFPQRFILKRDDTSMDRDDNQIRLPLQDGRRSKSIEEREEEYQRVRERIFARESGQNGFLTDRGPREGLRASGSRQSSTESELKALEPRPWSSTDSEGSSRSLRPPVTKASSFSGISILTRGDSIGSSKGSTASRSSRAGLVLGAPEACSQSPSSQPSRGLLPCSAPQPPPQAPGLPPAQQQPAMSSPMMSQPVPALQPVPYSPSSCPQVLLPVSPPQQYNLADELSSPFGQISLSRQGSSEAPDPSSAMFQSSLISQHPQQPGFIMAAPGQPIPTSSYSASGHTAPTQQVLQPQGYIQPPQQIQVSYYPPGQYPNSSQQYRPLSHPVAYSSQRPQQLPQQSQQPGLQPMMSNQQQTYQGVVGVQQAQPPGLLNSQRNNMGGQLQNVMGVQQAQPPGLLSNQRSNMGSQMQGLMVQYTPLPSYQVPMASESQNVVQQPFQQPVLVPASQSVQGGLQAGGVPIYYSVIPTAQQNGTSPSVGFLQPPGSEQYQMPQSPAPCSPPQMQQQYSGVSPSGPGVVVMQLNVPNGPQAPQNPPGQTGMKHGNRSKRQALKSASTDLGTSDVGDGRYSLLGQPLQYNLSLCPPPLLHSQPSYTGHQIPPGAEHTSGVQDWGAFEDPGKDLQGVLALPELGSAGGTRDLGVGEDPLPPIPGEPHRELSACH
SIO_010081: R3HDM2
subclass of: SO_0000673
so part of: R3HDM2
location: complement(join(1030641..1030835,1048118..1048218,1049352..1049436,1051313..1051392,1052034..1052134,1054140..1054294,1054539..1054774,1055156..1055282,1055773..1056015,1056451..1056540,1059538..1059695,1062523..1062645,1062712..1062818,1072855..1072883,1074193..1074288,1075550..1075658,1077115..1077255,1077402..1077461,1078062..1078140,1079746..1079872,1080080..1080166,1080640..1080681,1085446..1085613))
location: region:1030641-1085613:-1
so has part: feature:1085446-1085613:-1:exon
so has part: feature:1080640-1080681:-1:exon
so has part: feature:1080080-1080166:-1:exon
so has part: feature:1079746-1079872:-1:exon
so has part: feature:1078062-1078140:-1:exon
so has part: feature:1077402-1077461:-1:exon
so has part: feature:1077115-1077255:-1:exon
so has part: feature:1075550-1075658:-1:exon
so has part: feature:1074193-1074288:-1:exon
so has part: feature:1072855-1072883:-1:exon
so has part: feature:1062712-1062818:-1:exon
so has part: feature:1062523-1062645:-1:exon
so has part: feature:1059538-1059695:-1:exon
so has part: feature:1056451-1056540:-1:exon
so has part: feature:1055773-1056015:-1:exon
so has part: feature:1055156-1055282:-1:exon
so has part: feature:1054539-1054774:-1:exon
so has part: feature:1054140-1054294:-1:exon
so has part: feature:1052034-1052134:-1:exon
so has part: feature:1051313-1051392:-1:exon
so has part: feature:1049352-1049436:-1:exon
so has part: feature:1048118-1048218:-1:exon
so has part: feature:1030641-1030835:-1:exon

XP_016160424.1
type: Protein
SIO_000068: ncbiprotein

position:1085613:-1
position: 1085613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085446-1085613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080640-1080681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080080-1080166:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1079746-1079872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1078062-1078140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1077402-1077461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1077115-1077255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1075550-1075658:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074193-1074288:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1072855-1072883:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1062712-1062818:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1062523-1062645:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1059538-1059695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1056451-1056540:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1055773-1056015:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1055156-1055282:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1054539-1054774:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1054140-1054294:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1052034-1052134:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1051313-1051392:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1049352-1049436:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1048118-1048218:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1030641-1030835:-1:exon

INHBC
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: INHBC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1110155..1125593
location: region:1110155-1125593:1
so has part: feature:1110155-1125593:1:exon
subclass of: SO_0000010

101819075
type: Gene
SIO_000068: ncbigene

position:1110155:1
position: 1110155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125593:1
position: 1125593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110155-1125593:1:exon

INHBC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: INHBC
product: inhibin beta C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061405.1
SIO_010081: INHBC
subclass of: SO_0000673
so part of: INHBC
location: join(1110155..1110587,1111767..1112357,1124072..1124149,1124699..1125593)
location: region:1110155-1125593:1
so has part: feature:1110155-1110587:1:exon
so has part: feature:1111767-1112357:1:exon
so has part: feature:1124072-1124149:1:exon
so has part: feature:1124699-1125593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1110155-1110587:1:exon

position:1110587:1
position: 1110587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1111767-1112357:1:exon

position:1111767:1
position: 1111767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112357:1
position: 1112357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1124072-1124149:1:exon

position:1124072:1
position: 1124072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124149:1
position: 1124149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1124699-1125593:1:exon

position:1124699:1
position: 1124699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INHBC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: INHBC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibin beta C chain
translation: MMLTVVFLLLSLLRMVAAKGGWCPACGVAALAPGAQRDALLALAKQSILAKLRLPARPSAPQPPARGALLAALRRMRAQRSDTPGMLREPTRPGMGLQRYEILSFAESGSSTSRSVRLHFRFSQEVAGSTEILQATLYLFWAGPGAGAQPVTVRLLQPDPAGLNTTVASETRLEVQRSGWTTLDIGAAVRSLFGQETPRLTVELEVPEDWGSPLPSHHGDSHWPFVVAQAQARTPHRVHRRGVDCGADSRMCCRQEFFVDFKEIGWEDWIIQPEGYHMNFCAGLCPLHMASVPGLAASFHTAVLNRARRSPDVTGEEEEEQGYEIISFAETDLTSPSSLGLQFQFSQAQDQDIRILQAQLWLYLRVPRASLTLRIFLAGEAAGNRTLLGERRLSTAGSGWRSFPVLPAPQSFSGGQSRTLRLELQSRGDGSDVTAQVNASWSHQPFLVAKVKVREPDHRVAKRSLRCSQNSNLCCRKDYYVDFRDIGWNDWIIKPEGYQINYCVGQCPLHVAGSPGMASSFHTAVFNLVKANNVQASGNSCCVPTRRRPLSVLYFDRNSNIVKTDIPDMIVDACGCS
SIO_010081: INHBC
subclass of: SO_0000673
so part of: INHBC
location: join(1110263..1110587,1111767..1112357,1124072..1124149,1124699..1125438)
location: region:1110263-1125438:1
so has part: feature:1110263-1110587:1:exon
so has part: feature:1111767-1112357:1:exon
so has part: feature:1124072-1124149:1:exon
so has part: feature:1124699-1125438:1:exon

XP_005061462.1
type: Protein
SIO_000068: ncbiprotein

position:1110263:1
position: 1110263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125438:1
position: 1125438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1110263-1110587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1111767-1112357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124072-1124149:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1124699-1125438:1:exon

GLI1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1130019..1157731
location: region:1130019-1157731:1
so has part: feature:1130019-1157731:1:exon
subclass of: SO_0000010

101818882
type: Gene
SIO_000068: ncbigene

position:1130019:1
position: 1130019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157731:1
position: 1157731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1130019-1157731:1:exon

GLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GLI1
product: GLI family zinc finger 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304939.1
SIO_010081: GLI1
subclass of: SO_0000673
so part of: GLI1
location: join(1130019..1130106,1131568..1131726,1135833..1135937,1137328..1137495,1144186..1144324,1144471..1144618,1146230..1146328,1146416..1146556,1147093..1147242,1148865..1149078,1151655..1151842,1153136..1153415,1155254..1155631,1155761..1155876,1155927..1157152,1157294..1157731)
location: region:1130019-1157731:1
so has part: feature:1130019-1130106:1:exon
so has part: feature:1131568-1131726:1:exon
so has part: feature:1135833-1135937:1:exon
so has part: feature:1137328-1137495:1:exon
so has part: feature:1144186-1144324:1:exon
so has part: feature:1144471-1144618:1:exon
so has part: feature:1146230-1146328:1:exon
so has part: feature:1146416-1146556:1:exon
so has part: feature:1147093-1147242:1:exon
so has part: feature:1148865-1149078:1:exon
so has part: feature:1151655-1151842:1:exon
so has part: feature:1153136-1153415:1:exon
so has part: feature:1155254-1155631:1:exon
so has part: feature:1155761-1155876:1:exon
so has part: feature:1155927-1157152:1:exon
so has part: feature:1157294-1157731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1130019-1130106:1:exon

position:1130106:1
position: 1130106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1131568-1131726:1:exon

position:1131568:1
position: 1131568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131726:1
position: 1131726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1135833-1135937:1:exon

position:1135833:1
position: 1135833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135937:1
position: 1135937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1137328-1137495:1:exon

position:1137328:1
position: 1137328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137495:1
position: 1137495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1144186-1144324:1:exon

position:1144186:1
position: 1144186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144324:1
position: 1144324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1144471-1144618:1:exon

position:1144471:1
position: 1144471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144618:1
position: 1144618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1146230-1146328:1:exon

position:1146230:1
position: 1146230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146328:1
position: 1146328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1146416-1146556:1:exon

position:1146416:1
position: 1146416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146556:1
position: 1146556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1147093-1147242:1:exon

position:1147093:1
position: 1147093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147242:1
position: 1147242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1148865-1149078:1:exon

position:1148865:1
position: 1148865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149078:1
position: 1149078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1151655-1151842:1:exon

position:1151655:1
position: 1151655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151842:1
position: 1151842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1153136-1153415:1:exon

position:1153136:1
position: 1153136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153415:1
position: 1153415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1155254-1155631:1:exon

position:1155254:1
position: 1155254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155631:1
position: 1155631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1155761-1155876:1:exon

position:1155761:1
position: 1155761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155876:1
position: 1155876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1155927-1157152:1:exon

position:1155927:1
position: 1155927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157152:1
position: 1157152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1157294-1157731:1:exon

position:1157294:1
position: 1157294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GLI1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1149069..1149071,aa:OTHER)
product: LOW QUALITY PROTEIN: zinc finger protein GLI1
translation: MSPPTRAWAVREDRAHAYTHAYACTRDPSRRVMALGAAGTAWGLHLSREDGDGERGEDGAVEFGGLPALRWQSEGCSLSWEDAFPGQGPPWNELGSPHQHGIMTLSRPLSDPLNLKRSPTGVTTLTSSPEKPLPHEPKSPTHTCKHAENTCVQPGADSSPEPPRPPTPGAVPAARTPLSDSSIDLQTVIRTSPNSLVAFINSRCASAGGSYGHLSISTISPSLGYQSPPGQQKGQGHLYTPPPPCSSHELPTRPGLQHPPARGGLKHCQLKLEWSLSSPLSAKFPEERSEGDISSPASTGTQDPLLGMLDVREELEKEDGKPECEAVYETNCYWDGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEVRPHPGLPNHSCPXELRGHVKTVHGPDAHVTKKHRGDVGPGRAVPAPGAPPDLKQEKDANGPSEARKDEGKLLVPELALKPQPSPGGQSSCSSDHSPLGSTTNNDSGVEMAGNAGGSYEDLSTLEDVVPGEPMGTSGLMALHKLENLRIDKLKQLRKPAAPKGLNLPPIPGAGLPGEVPGVPVPPPASHRRIAELSAAELGLAAPGERRSSGTSTVSSAYTVSRRSSLVSPFLAGAVPGGPCPGDGYDPVSPGESRRSSDAGVCGVLPGVGNLTPAQRYRLKAKYAAATGGPPPTPLPGGHCGYPAPPGPRCVANGLLRRHSSNEQPGYPGSVPAQLLAPRHGVRRASDPARTVAKPPAVPRVQRFKSVGNVSVPGGARTALQPLGGSEANLQRHGFSPRPPSITENVFLESVGGPGPESGLLDMDQYLSYPEESFPCQGPAVELQGGVYGAQRTMVGTHGDMEEGLLQPEFSLPQCQMNQRFPGLPAGNGAVSEPWDGPPQGTLDMSSRQSAAPAMSGPHCPHQSLEYPHPSACGQHPKLVSSCQDSEFSRGHRFNRLQIKSEQRYPAPSPALAPCPSAKLGGPPASPAAFGHAVDVGPGGFPPVAGGYLGVGSPGTRRAQTPTLQTKEVMVRNYVEAQQALMWGEQPPPKGSVAGVGLGSEPGQCQAAPAPPYLSPRYCGYQPKADHLQEPQHLLSPPCFSPEMIPHPPGGPKPPGHQASLSSWAQPGHGYEGVDTSGRRLPRLGGGRPAPEGPGNLPLYYPGQSPHGQGGKGGHKLLGQGAASCGGSGHYGPEGLRGTSCYYLDSGEQVANSLDSLDLENTHLDFAAIVEDVETPPALPTPQPGWGPPSPAGGLLLPSSGGANMAVGDMSSMLSTLAGESHFLNSLS
SIO_010081: GLI1
subclass of: SO_0000673
so part of: GLI1
location: join(1130019..1130106,1131568..1131726,1135833..1135937,1137328..1137495,1144186..1144324,1144471..1144618,1146230..1146328,1146416..1146556,1147093..1147242,1148865..1149078,1151655..1151842,1153136..1153415,1155254..1155631,1155761..1155876,1155927..1157152,1157294..1157731)
location: region:1130019-1157731:1
so has part: feature:1130019-1130106:1:exon
so has part: feature:1131568-1131726:1:exon
so has part: feature:1135833-1135937:1:exon
so has part: feature:1137328-1137495:1:exon
so has part: feature:1144186-1144324:1:exon
so has part: feature:1144471-1144618:1:exon
so has part: feature:1146230-1146328:1:exon
so has part: feature:1146416-1146556:1:exon
so has part: feature:1147093-1147242:1:exon
so has part: feature:1148865-1149078:1:exon
so has part: feature:1151655-1151842:1:exon
so has part: feature:1153136-1153415:1:exon
so has part: feature:1155254-1155631:1:exon
so has part: feature:1155761-1155876:1:exon
so has part: feature:1155927-1157152:1:exon
so has part: feature:1157294-1157731:1:exon

XP_016160425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1130019-1130106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1131568-1131726:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135833-1135937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137328-1137495:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144186-1144324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144471-1144618:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1146230-1146328:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1146416-1146556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1147093-1147242:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1148865-1149078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1151655-1151842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1153136-1153415:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1155254-1155631:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1155761-1155876:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1155927-1157152:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1157294-1157731:1:exon

LOC101818687
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101818687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1159886..1165915)
location: region:1159886-1165915:-1
so has part: feature:1159886-1165915:-1:exon
subclass of: SO_0000010

101818687
type: Gene
SIO_000068: ncbigene

position:1159886:-1
position: 1159886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165915:-1
position: 1165915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159886-1165915:-1:exon

LOC101818687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101818687
product: vimentin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061403.2
SIO_010081: LOC101818687
subclass of: SO_0000673
so part of: LOC101818687
location: complement(join(1159886..1160364,1160439..1160515,1160644..1160693,1161013..1161233,1161316..1161441,1161517..1161638,1161955..1161985,1162411..1162487,1162568..1162665,1162985..1163205,1164672..1165022,1165889..1165915))
location: region:1159886-1165915:-1
so has part: feature:1165889-1165915:-1:exon
so has part: feature:1164672-1165022:-1:exon
so has part: feature:1162985-1163205:-1:exon
so has part: feature:1162568-1162665:-1:exon
so has part: feature:1162411-1162487:-1:exon
so has part: feature:1161955-1161985:-1:exon
so has part: feature:1161517-1161638:-1:exon
so has part: feature:1161316-1161441:-1:exon
so has part: feature:1161013-1161233:-1:exon
so has part: feature:1160644-1160693:-1:exon
so has part: feature:1160439-1160515:-1:exon
so has part: feature:1159886-1160364:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1165889-1165915:-1:exon

position:1165889:-1
position: 1165889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1164672-1165022:-1:exon

position:1164672:-1
position: 1164672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165022:-1
position: 1165022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1162985-1163205:-1:exon

position:1162985:-1
position: 1162985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163205:-1
position: 1163205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1162568-1162665:-1:exon

position:1162568:-1
position: 1162568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162665:-1
position: 1162665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1162411-1162487:-1:exon

position:1162411:-1
position: 1162411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162487:-1
position: 1162487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1161955-1161985:-1:exon

position:1161955:-1
position: 1161955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161985:-1
position: 1161985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1161517-1161638:-1:exon

position:1161517:-1
position: 1161517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161638:-1
position: 1161638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1161316-1161441:-1:exon

position:1161316:-1
position: 1161316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161441:-1
position: 1161441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1161013-1161233:-1:exon

position:1161013:-1
position: 1161013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161233:-1
position: 1161233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1160644-1160693:-1:exon

position:1160644:-1
position: 1160644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160693:-1
position: 1160693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1160439-1160515:-1:exon

position:1160439:-1
position: 1160439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160515:-1
position: 1160515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1159886-1160364:-1:exon

position:1160364:-1
position: 1160364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101818687
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101818687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vimentin
translation: MSRRDRDPGFGEEEPWEGIRSADTGKGTRDARRALGGAGSAGLCGRAGHWEEQGKGGGTGRELVRALGTPHPRSPPLCVEGAATGGRRRGVCTPAPTSLSSLAVPRLEDETQKREDAEKSLVLIRKNEALQRQMREMEDEFGEEIGNYQDVVGRLEQEIQQMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITIPLQPTTSFSMRSSGEGQRIPHYVWGSFLGVLEPQPAESSARRMVLIKTIETRDGQSWHRLPPGLEALAEVEVCKPELTAALREIRTQYESIAVKNLQEAEEWYKSKFADLSDAANRNHEALRLAKQEMNESRRQIQSLTCEVDGLKGVNEALQRQMREMEDEFGEEIGNYQDVVGRLEQEIQQMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITIPLQPTTSFSMRSSVLEPQPAESSARRMVLIKTIETRDGQQVVTESHKERAGK
SIO_010081: LOC101818687
subclass of: SO_0000673
so part of: LOC101818687
location: complement(join(1160323..1160364,1160439..1160515,1160644..1160693,1161013..1161233,1161316..1161441,1161517..1161638,1161955..1161985,1162411..1162487,1162568..1162665,1162985..1163205,1164672..1165022,1165889..1165915))
location: region:1160323-1165915:-1
so has part: feature:1165889-1165915:-1:exon
so has part: feature:1164672-1165022:-1:exon
so has part: feature:1162985-1163205:-1:exon
so has part: feature:1162568-1162665:-1:exon
so has part: feature:1162411-1162487:-1:exon
so has part: feature:1161955-1161985:-1:exon
so has part: feature:1161517-1161638:-1:exon
so has part: feature:1161316-1161441:-1:exon
so has part: feature:1161013-1161233:-1:exon
so has part: feature:1160644-1160693:-1:exon
so has part: feature:1160439-1160515:-1:exon
so has part: feature:1160323-1160364:-1:exon

XP_005061460.2
type: Protein
SIO_000068: ncbiprotein

position:1160323:-1
position: 1160323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165889-1165915:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1164672-1165022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1162985-1163205:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1162568-1162665:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1162411-1162487:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1161955-1161985:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1161517-1161638:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1161316-1161441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1161013-1161233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1160644-1160693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1160439-1160515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1160323-1160364:-1:exon

LOC101813138
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101813138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1161861..1163246)
location: region:1161861-1163246:-1
so has part: feature:1161861-1163246:-1:exon
subclass of: SO_0000010

101813138
type: Gene
SIO_000068: ncbigene

position:1161861:-1
position: 1161861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163246:-1
position: 1163246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161861-1163246:-1:exon

LOC101813138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101813138
product: peripherin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005061375.2
SIO_010081: LOC101813138
subclass of: SO_0000673
so part of: LOC101813138
location: complement(join(1161861..1162336,1162411..1162487,1162616..1162665,1162985..1163246))
location: region:1161861-1163246:-1
so has part: feature:1162985-1163246:-1:exon
so has part: feature:1162616-1162665:-1:exon
so has part: feature:1162411-1162487:-1:exon
so has part: feature:1161861-1162336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1162985-1163246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162616-1162665:-1:exon

position:1162616:-1
position: 1162616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1162411-1162487:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161861-1162336:-1:exon

position:1162336:-1
position: 1162336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101813138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101813138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripherin-like
translation: MREMEDEFGEEIGNYQDVVGRLEQEIQQMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITIPLQPTTSFSMRSSVLEPQPAESSARRMVLIKTIETRDGQQVVTESHKERAGK
SIO_010081: LOC101813138
subclass of: SO_0000673
so part of: LOC101813138
location: complement(join(1162295..1162336,1162411..1162487,1162616..1162665,1162985..1163184))
location: region:1162295-1163184:-1
so has part: feature:1162985-1163184:-1:exon
so has part: feature:1162616-1162665:-1:exon
so has part: feature:1162411-1162487:-1:exon
so has part: feature:1162295-1162336:-1:exon

XP_005061432.1
type: Protein
SIO_000068: ncbiprotein

position:1162295:-1
position: 1162295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163184:-1
position: 1163184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162985-1163184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1162616-1162665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1162411-1162487:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1162295-1162336:-1:exon

LOC101812670
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1166966..1173009)
location: region:1166966-1173009:-1
so has part: feature:1166966-1173009:-1:exon
subclass of: SO_0000010

101812670
type: Gene
SIO_000068: ncbigene

position:1166966:-1
position: 1166966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173009:-1
position: 1173009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1166966-1173009:-1:exon

LOC101812670
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812670
product: tubulin alpha-1C chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005061372.2
SIO_010081: LOC101812670
subclass of: SO_0000673
so part of: LOC101812670
location: complement(join(1166966..1167980,1168839..1168987,1169079..1169301,1172927..1173009))
location: region:1166966-1173009:-1
so has part: feature:1172927-1173009:-1:exon
so has part: feature:1169079-1169301:-1:exon
so has part: feature:1168839-1168987:-1:exon
so has part: feature:1166966-1167980:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1172927-1173009:-1:exon

position:1172927:-1
position: 1172927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1169079-1169301:-1:exon

position:1169079:-1
position: 1169079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169301:-1
position: 1169301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1168839-1168987:-1:exon

position:1168839:-1
position: 1168839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168987:-1
position: 1168987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1166966-1167980:-1:exon

position:1167980:-1
position: 1167980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101812670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812670
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1C chain
translation: MTVGLLAMSKRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSLEGEEDGEEY
SIO_010081: LOC101812670
subclass of: SO_0000673
so part of: LOC101812670
location: complement(join(1167006..1167980,1168839..1168987,1169079..1169301,1172927..1172956))
location: region:1167006-1172956:-1
so has part: feature:1172927-1172956:-1:exon
so has part: feature:1169079-1169301:-1:exon
so has part: feature:1168839-1168987:-1:exon
so has part: feature:1167006-1167980:-1:exon

XP_005061429.2
type: Protein
SIO_000068: ncbiprotein

position:1167006:-1
position: 1167006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172956:-1
position: 1172956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172927-1172956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1169079-1169301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168839-1168987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1167006-1167980:-1:exon

TUBA1A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TUBA1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1177564..1190358
location: region:1177564-1190358:1
so has part: feature:1177564-1190358:1:exon
subclass of: SO_0000010

101812141
type: Gene
SIO_000068: ncbigene

position:1177564:1
position: 1177564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190358:1
position: 1190358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177564-1190358:1:exon

TUBA1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TUBA1A
product: tubulin alpha 1a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 204 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005061370.2
SIO_010081: TUBA1A
subclass of: SO_0000673
so part of: TUBA1A
location: join(1177564..1177822,1177914..1178062,1179231..1180213,1190173..1190358)
location: region:1177564-1190358:1
so has part: feature:1177564-1177822:1:exon
so has part: feature:1177914-1178062:1:exon
so has part: feature:1179231-1180213:1:exon
so has part: feature:1190173-1190358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1177564-1177822:1:exon

position:1177822:1
position: 1177822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1177914-1178062:1:exon

position:1177914:1
position: 1177914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178062:1
position: 1178062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1179231-1180213:1:exon

position:1179231:1
position: 1179231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180213:1
position: 1180213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1190173-1190358:1:exon

position:1190173:1
position: 1190173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TUBA1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TUBA1A
product: tubulin alpha 1a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005061369.2
SIO_010081: TUBA1A
subclass of: SO_0000673
so part of: TUBA1A
location: join(1177564..1177822,1177914..1178062,1179231..1179892,1180892..1181385)
location: region:1177564-1181385:1
so has part: feature:1177564-1177822:1:exon
so has part: feature:1177914-1178062:1:exon
so has part: feature:1179231-1179892:1:exon
so has part: feature:1180892-1181385:1:exon

position:1181385:1
position: 1181385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177564-1177822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177914-1178062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1179231-1179892:1:exon

position:1179892:1
position: 1179892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1180892-1181385:1:exon

position:1180892:1
position: 1180892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TUBA1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TUBA1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1A chain isoform X2
translation: MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY
SIO_010081: TUBA1A
subclass of: SO_0000673
so part of: TUBA1A
location: join(1177702..1177822,1177914..1178062,1179231..1179892,1180892..1181210)
location: region:1177702-1181210:1
so has part: feature:1177702-1177822:1:exon
so has part: feature:1177914-1178062:1:exon
so has part: feature:1179231-1179892:1:exon
so has part: feature:1180892-1181210:1:exon

XP_005061426.2
type: Protein
SIO_000068: ncbiprotein

position:1177702:1
position: 1177702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181210:1
position: 1181210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177702-1177822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177914-1178062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1179231-1179892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1180892-1181210:1:exon

TUBA1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TUBA1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1A chain isoform X1
translation: MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY
SIO_010081: TUBA1A
subclass of: SO_0000673
so part of: TUBA1A
location: join(1177702..1177822,1177914..1178062,1179231..1180211)
location: region:1177702-1180211:1
so has part: feature:1177702-1177822:1:exon
so has part: feature:1177914-1178062:1:exon
so has part: feature:1179231-1180211:1:exon

XP_005061427.2
type: Protein
SIO_000068: ncbiprotein

position:1180211:1
position: 1180211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1177702-1177822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1177914-1178062:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1179231-1180211:1:exon

LOC101812477
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1187117..1190358
location: region:1187117-1190358:1
so has part: feature:1187117-1190358:1:exon
subclass of: SO_0000010

101812477
type: Gene
SIO_000068: ncbigene

position:1187117:1
position: 1187117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187117-1190358:1:exon

LOC101812477
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812477
product: tubulin alpha-1A chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 226 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061371.2
SIO_010081: LOC101812477
subclass of: SO_0000673
so part of: LOC101812477
location: join(1187117..1187474,1187566..1187714,1188521..1189503,1190173..1190358)
location: region:1187117-1190358:1
so has part: feature:1187117-1187474:1:exon
so has part: feature:1187566-1187714:1:exon
so has part: feature:1188521-1189503:1:exon
so has part: feature:1190173-1190358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1187117-1187474:1:exon

position:1187474:1
position: 1187474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1187566-1187714:1:exon

position:1187566:1
position: 1187566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187714:1
position: 1187714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1188521-1189503:1:exon

position:1188521:1
position: 1188521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189503:1
position: 1189503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1190173-1190358:1:exon

LOC101812477
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1A chain
translation: MGPRKLSAVGASGQDLAPSNAGVGQRGDKRGDPVRRVPPQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY
SIO_010081: LOC101812477
subclass of: SO_0000673
so part of: LOC101812477
location: join(1187132..1187474,1187566..1187714,1188521..1189501)
location: region:1187132-1189501:1
so has part: feature:1187132-1187474:1:exon
so has part: feature:1187566-1187714:1:exon
so has part: feature:1188521-1189501:1:exon

XP_005061428.1
type: Protein
SIO_000068: ncbiprotein

position:1187132:1
position: 1187132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189501:1
position: 1189501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187132-1187474:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187566-1187714:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1188521-1189501:1:exon

LMBR1L
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LMBR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1193071..1196737
location: region:1193071-1196737:1
so has part: feature:1193071-1196737:1:exon
subclass of: SO_0000010

101818492
type: Gene
SIO_000068: ncbigene

position:1193071:1
position: 1193071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196737:1
position: 1196737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193071-1196737:1:exon

LMBR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LMBR1L
product: limb development membrane protein 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016304967.1
SIO_010081: LMBR1L
subclass of: SO_0000673
so part of: LMBR1L
location: join(1193071..1193171,1193437..1193473,1193937..1194076,1194172..1194275,1194359..1194485,1194591..1194659,1194802..1194866,1195002..1195077,1195186..1195272,1195456..1195532,1195616..1195693,1195786..1195859,1195955..1196045,1196251..1196317,1196408..1196569,1196650..1196737)
location: region:1193071-1196737:1
so has part: feature:1193071-1193171:1:exon
so has part: feature:1193437-1193473:1:exon
so has part: feature:1193937-1194076:1:exon
so has part: feature:1194172-1194275:1:exon
so has part: feature:1194359-1194485:1:exon
so has part: feature:1194591-1194659:1:exon
so has part: feature:1194802-1194866:1:exon
so has part: feature:1195002-1195077:1:exon
so has part: feature:1195186-1195272:1:exon
so has part: feature:1195456-1195532:1:exon
so has part: feature:1195616-1195693:1:exon
so has part: feature:1195786-1195859:1:exon
so has part: feature:1195955-1196045:1:exon
so has part: feature:1196251-1196317:1:exon
so has part: feature:1196408-1196569:1:exon
so has part: feature:1196650-1196737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1193071-1193171:1:exon

position:1193171:1
position: 1193171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1193437-1193473:1:exon

position:1193437:1
position: 1193437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1193473:1
position: 1193473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1193937-1194076:1:exon

position:1193937:1
position: 1193937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194076:1
position: 1194076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1194172-1194275:1:exon

position:1194172:1
position: 1194172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194275:1
position: 1194275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1194359-1194485:1:exon

position:1194359:1
position: 1194359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194485:1
position: 1194485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1194591-1194659:1:exon

position:1194591:1
position: 1194591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194659:1
position: 1194659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1194802-1194866:1:exon

position:1194802:1
position: 1194802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194866:1
position: 1194866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1195002-1195077:1:exon

position:1195002:1
position: 1195002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195077:1
position: 1195077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1195186-1195272:1:exon

position:1195186:1
position: 1195186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195272:1
position: 1195272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1195456-1195532:1:exon

position:1195456:1
position: 1195456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195532:1
position: 1195532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1195616-1195693:1:exon

position:1195616:1
position: 1195616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195693:1
position: 1195693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1195786-1195859:1:exon

position:1195786:1
position: 1195786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195859:1
position: 1195859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1195955-1196045:1:exon

position:1195955:1
position: 1195955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196045:1
position: 1196045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1196251-1196317:1:exon

position:1196251:1
position: 1196251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196317:1
position: 1196317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1196408-1196569:1:exon

position:1196408:1
position: 1196408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196569:1
position: 1196569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1196650-1196737:1:exon

position:1196650:1
position: 1196650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LMBR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LMBR1L
product: limb development membrane protein 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016304966.1
SIO_010081: LMBR1L
subclass of: SO_0000673
so part of: LMBR1L
location: join(1193126..1193171,1193437..1193473,1193937..1194076,1194172..1194275,1194359..1194485,1194591..1194659,1194802..1194866,1195002..1195077,1195189..1195272,1195456..1195532,1195616..1195693,1195786..1195859,1195955..1196045,1196251..1196317,1196408..1196569,1196650..1196737)
location: region:1193126-1196737:1
so has part: feature:1193126-1193171:1:exon
so has part: feature:1193437-1193473:1:exon
so has part: feature:1193937-1194076:1:exon
so has part: feature:1194172-1194275:1:exon
so has part: feature:1194359-1194485:1:exon
so has part: feature:1194591-1194659:1:exon
so has part: feature:1194802-1194866:1:exon
so has part: feature:1195002-1195077:1:exon
so has part: feature:1195189-1195272:1:exon
so has part: feature:1195456-1195532:1:exon
so has part: feature:1195616-1195693:1:exon
so has part: feature:1195786-1195859:1:exon
so has part: feature:1195955-1196045:1:exon
so has part: feature:1196251-1196317:1:exon
so has part: feature:1196408-1196569:1:exon
so has part: feature:1196650-1196737:1:exon

position:1193126:1
position: 1193126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193126-1193171:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1193437-1193473:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1193937-1194076:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1194172-1194275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1194359-1194485:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1194591-1194659:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1194802-1194866:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1195002-1195077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1195189-1195272:1:exon

position:1195189:1
position: 1195189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1195456-1195532:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1195616-1195693:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1195786-1195859:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1195955-1196045:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1196251-1196317:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1196408-1196569:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1196650-1196737:1:exon

LMBR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LMBR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LMBR1L isoform X2
translation: MSLVFLMPFAYFFTESEGFAGSKKGIMARVYETSVVLLLLTLLVLGMVWVASAIVGNDAASRQSLYDLWEYYLPYLYSCISLFGVLLLLLCTPFGLSTMFTVTGKLLVKPRLLEDLDEQLSCTRFEEAAVSHRIRSAGKASCWLNLDMEMLREQFFAIQSKRRKLELRHRASPWQRNLGYPLAMLGLLALTGISVLIVCFHVLELLLDDAAMPRGIQDASLGQVSFSIFGSFGAALQVVLIFYLMVSSVVGFYSSPLFTRLLPERQDTPLTKIIGNCVSLLVLSSALPVFSRTLGITRFDLLGDFGRFNWLGNFYIVFLYNMGFAGLTTLCLVKRVSWAVQAELIRAFGLHKLPLPVTRCRTRSKPC
SIO_010081: LMBR1L
subclass of: SO_0000673
so part of: LMBR1L
location: join(1194204..1194275,1194359..1194485,1194591..1194659,1194802..1194866,1195002..1195077,1195186..1195272,1195456..1195532,1195616..1195693,1195786..1195859,1195955..1196045,1196251..1196317,1196408..1196569,1196650..1196708)
location: region:1194204-1196708:1
so has part: feature:1194204-1194275:1:exon
so has part: feature:1194359-1194485:1:exon
so has part: feature:1194591-1194659:1:exon
so has part: feature:1194802-1194866:1:exon
so has part: feature:1195002-1195077:1:exon
so has part: feature:1195186-1195272:1:exon
so has part: feature:1195456-1195532:1:exon
so has part: feature:1195616-1195693:1:exon
so has part: feature:1195786-1195859:1:exon
so has part: feature:1195955-1196045:1:exon
so has part: feature:1196251-1196317:1:exon
so has part: feature:1196408-1196569:1:exon
so has part: feature:1196650-1196708:1:exon

XP_016160453.1
type: Protein
SIO_000068: ncbiprotein

position:1194204:1
position: 1194204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196708:1
position: 1196708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194204-1194275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1194359-1194485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1194591-1194659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1194802-1194866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1195002-1195077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195186-1195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195456-1195532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1195616-1195693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1195786-1195859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195955-1196045:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1196251-1196317:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1196408-1196569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1196650-1196708:1:exon

LMBR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LMBR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LMBR1L isoform X1
translation: MSLVFLMPFAYFFTESEGFAGSKKGIMARVYETSVVLLLLTLLVLGMVWVASAIVGNDAASRQSLYDLWEYYLPYLYSCISLFGVLLLLLCTPFGLSTMFTVTGKLLVKPRLLEDLDEQLSCTRFEEAAVSHRIRSGKASCWLNLDMEMLREQFFAIQSKRRKLELRHRASPWQRNLGYPLAMLGLLALTGISVLIVCFHVLELLLDDAAMPRGIQDASLGQVSFSIFGSFGAALQVVLIFYLMVSSVVGFYSSPLFTRLLPERQDTPLTKIIGNCVSLLVLSSALPVFSRTLGITRFDLLGDFGRFNWLGNFYIVFLYNMGFAGLTTLCLVKRVSWAVQAELIRAFGLHKLPLPVTRCRTRSKPC
SIO_010081: LMBR1L
subclass of: SO_0000673
so part of: LMBR1L
location: join(1194204..1194275,1194359..1194485,1194591..1194659,1194802..1194866,1195002..1195077,1195189..1195272,1195456..1195532,1195616..1195693,1195786..1195859,1195955..1196045,1196251..1196317,1196408..1196569,1196650..1196708)
location: region:1194204-1196708:1
so has part: feature:1194204-1194275:1:exon
so has part: feature:1194359-1194485:1:exon
so has part: feature:1194591-1194659:1:exon
so has part: feature:1194802-1194866:1:exon
so has part: feature:1195002-1195077:1:exon
so has part: feature:1195189-1195272:1:exon
so has part: feature:1195456-1195532:1:exon
so has part: feature:1195616-1195693:1:exon
so has part: feature:1195786-1195859:1:exon
so has part: feature:1195955-1196045:1:exon
so has part: feature:1196251-1196317:1:exon
so has part: feature:1196408-1196569:1:exon
so has part: feature:1196650-1196708:1:exon

XP_016160452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1194204-1194275:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1194359-1194485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1194591-1194659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1194802-1194866:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1195002-1195077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1195189-1195272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1195456-1195532:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1195616-1195693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1195786-1195859:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1195955-1196045:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1196251-1196317:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1196408-1196569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1196650-1196708:1:exon

DHH
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DHH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1199121..1205330
location: region:1199121-1205330:1
so has part: feature:1199121-1205330:1:exon
subclass of: SO_0000010

101818276
type: Gene
SIO_000068: ncbigene

position:1199121:1
position: 1199121
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1205330:1
position: 1205330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199121-1205330:1:exon

DHH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DHH
product: desert hedgehog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304940.1
SIO_010081: DHH
subclass of: SO_0000673
so part of: DHH
location: join(<1199121..1199183,1202657..1202918,1203523..1203830,1204225..1205330)
location: region:1199121-1205330:1
so has part: feature:1199121-1199183:1:exon
so has part: feature:1202657-1202918:1:exon
so has part: feature:1203523-1203830:1:exon
so has part: feature:1204225-1205330:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1199121-1199183:1:exon

position:1199183:1
position: 1199183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1202657-1202918:1:exon

position:1202657:1
position: 1202657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1202918:1
position: 1202918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1203523-1203830:1:exon

position:1203523:1
position: 1203523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1203830:1
position: 1203830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1204225-1205330:1:exon

position:1204225:1
position: 1204225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DHH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: desert hedgehog protein
translation: GAARPGRLRAAHGAEQHPRQPRCKERVNSLAIAVMNMWPGVKLRVTEGWDEDGHHLPDSLHYEGRALDITTSDRDRHKYGMLARLAVEAGFDWVYYESKAHIHVSVKADNSLAVRTGGWGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQGDGVLGAEPGGRLVPTEVLLFLDRDLGQRASFVAIETASPAQRLLLTPSHLVFAARGAANGSAAFLPVFARRVRPGDAVLAHGAGGQGLRPTRVLRVSREDGVGVFAPLTSHGTLLVNGVLASCYAVLESHRWAHRAFAPLRLFHGLLSLLPAHPEGGNGTVPEVGMHWYSRLLYRLAGGVLGQEALQV
SIO_010081: DHH
subclass of: SO_0000673
so part of: DHH
location: join(<1199121..1199183,1202657..1202918,1203523..1203830,1204225..1204614)
location: region:1199121-1204614:1
so has part: feature:1199121-1199183:1:exon
so has part: feature:1202657-1202918:1:exon
so has part: feature:1203523-1203830:1:exon
so has part: feature:1204225-1204614:1:exon

XP_016160426.1
type: Protein
SIO_000068: ncbiprotein

position:1204614:1
position: 1204614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1199121-1199183:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1202657-1202918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1203523-1203830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1204225-1204614:1:exon

KMT2D
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: KMT2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1213202..1241535
location: region:1213202-1241535:1
so has part: feature:1213202-1241535:1:exon
subclass of: SO_0000010

101818086
type: Gene
SIO_000068: ncbigene

position:1213202:1
position: 1213202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241535:1
position: 1241535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213202-1241535:1:exon

KMT2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KMT2D
product: lysine methyltransferase 2D
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304941.1
SIO_010081: KMT2D
subclass of: SO_0000673
so part of: KMT2D
location: join(1213202..1213284,1213384..1213549,1213632..1213746,1213826..1213992,1214121..1214884,1215225..1215412,1215653..1215691,1215731..1215824,1215914..1216776,1216858..1216971,1217292..1217402,1217507..1217611,1217824..1218005,1218081..1218245,1218336..1218442,1218534..1218575,1218671..1218886,1218970..1219113,1219203..1219319,1220428..1220552,1220635..1220824,1221867..1221941,1222258..1222362,1222475..1222648,1222943..1223027,1223121..1223365,1223689..1223762,1223874..1223924,1224064..1224766,1225429..1225919,1226087..1226210,1227251..1227640,1227781..1229737,1229830..1229953,1230047..1230134,1230282..1230348,1230500..1230732,1231387..1233435,1233516..1234556,1234638..1234752,1234807..1234835,1234911..1235075,1235162..1235318,1235430..1235511,1235605..1235780,1236117..1236265,1236371..1236506,1236587..1236723,1237006..1237131,1237237..1237372,1237453..1237589,1237872..1239042,1239755..1239891,1239985..1240115,1240202..1240487,1240884..1240957,1241061..1241169,1241281..1241535)
location: region:1213202-1241535:1
so has part: feature:1213202-1213284:1:exon
so has part: feature:1213384-1213549:1:exon
so has part: feature:1213632-1213746:1:exon
so has part: feature:1213826-1213992:1:exon
so has part: feature:1214121-1214884:1:exon
so has part: feature:1215225-1215412:1:exon
so has part: feature:1215653-1215691:1:exon
so has part: feature:1215731-1215824:1:exon
so has part: feature:1215914-1216776:1:exon
so has part: feature:1216858-1216971:1:exon
so has part: feature:1217292-1217402:1:exon
so has part: feature:1217507-1217611:1:exon
so has part: feature:1217824-1218005:1:exon
so has part: feature:1218081-1218245:1:exon
so has part: feature:1218336-1218442:1:exon
so has part: feature:1218534-1218575:1:exon
so has part: feature:1218671-1218886:1:exon
so has part: feature:1218970-1219113:1:exon
so has part: feature:1219203-1219319:1:exon
so has part: feature:1220428-1220552:1:exon
so has part: feature:1220635-1220824:1:exon
so has part: feature:1221867-1221941:1:exon
so has part: feature:1222258-1222362:1:exon
so has part: feature:1222475-1222648:1:exon
so has part: feature:1222943-1223027:1:exon
so has part: feature:1223121-1223365:1:exon
so has part: feature:1223689-1223762:1:exon
so has part: feature:1223874-1223924:1:exon
so has part: feature:1224064-1224766:1:exon
so has part: feature:1225429-1225919:1:exon
so has part: feature:1226087-1226210:1:exon
so has part: feature:1227251-1227640:1:exon
so has part: feature:1227781-1229737:1:exon
so has part: feature:1229830-1229953:1:exon
so has part: feature:1230047-1230134:1:exon
so has part: feature:1230282-1230348:1:exon
so has part: feature:1230500-1230732:1:exon
so has part: feature:1231387-1233435:1:exon
so has part: feature:1233516-1234556:1:exon
so has part: feature:1234638-1234752:1:exon
so has part: feature:1234807-1234835:1:exon
so has part: feature:1234911-1235075:1:exon
so has part: feature:1235162-1235318:1:exon
so has part: feature:1235430-1235511:1:exon
so has part: feature:1235605-1235780:1:exon
so has part: feature:1236117-1236265:1:exon
so has part: feature:1236371-1236506:1:exon
so has part: feature:1236587-1236723:1:exon
so has part: feature:1237006-1237131:1:exon
so has part: feature:1237237-1237372:1:exon
so has part: feature:1237453-1237589:1:exon
so has part: feature:1237872-1239042:1:exon
so has part: feature:1239755-1239891:1:exon
so has part: feature:1239985-1240115:1:exon
so has part: feature:1240202-1240487:1:exon
so has part: feature:1240884-1240957:1:exon
so has part: feature:1241061-1241169:1:exon
so has part: feature:1241281-1241535:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1213202-1213284:1:exon

position:1213284:1
position: 1213284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1213384-1213549:1:exon

position:1213384:1
position: 1213384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213549:1
position: 1213549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1213632-1213746:1:exon

position:1213632:1
position: 1213632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213746:1
position: 1213746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1213826-1213992:1:exon

position:1213826:1
position: 1213826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1213992:1
position: 1213992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1214121-1214884:1:exon

position:1214121:1
position: 1214121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1214884:1
position: 1214884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1215225-1215412:1:exon

position:1215225:1
position: 1215225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215412:1
position: 1215412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1215653-1215691:1:exon

position:1215653:1
position: 1215653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215691:1
position: 1215691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1215731-1215824:1:exon

position:1215731:1
position: 1215731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215824:1
position: 1215824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1215914-1216776:1:exon

position:1215914:1
position: 1215914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216776:1
position: 1216776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1216858-1216971:1:exon

position:1216858:1
position: 1216858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1216971:1
position: 1216971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1217292-1217402:1:exon

position:1217292:1
position: 1217292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217402:1
position: 1217402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1217507-1217611:1:exon

position:1217507:1
position: 1217507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1217611:1
position: 1217611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1217824-1218005:1:exon

position:1217824:1
position: 1217824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218005:1
position: 1218005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1218081-1218245:1:exon

position:1218081:1
position: 1218081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218245:1
position: 1218245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1218336-1218442:1:exon

position:1218336:1
position: 1218336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218442:1
position: 1218442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1218534-1218575:1:exon

position:1218534:1
position: 1218534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218575:1
position: 1218575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1218671-1218886:1:exon

position:1218671:1
position: 1218671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218886:1
position: 1218886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1218970-1219113:1:exon

position:1218970:1
position: 1218970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219113:1
position: 1219113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1219203-1219319:1:exon

position:1219203:1
position: 1219203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219319:1
position: 1219319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1220428-1220552:1:exon

position:1220428:1
position: 1220428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220552:1
position: 1220552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1220635-1220824:1:exon

position:1220635:1
position: 1220635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220824:1
position: 1220824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1221867-1221941:1:exon

position:1221867:1
position: 1221867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221941:1
position: 1221941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1222258-1222362:1:exon

position:1222258:1
position: 1222258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222362:1
position: 1222362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1222475-1222648:1:exon

position:1222475:1
position: 1222475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222648:1
position: 1222648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1222943-1223027:1:exon

position:1222943:1
position: 1222943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223027:1
position: 1223027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1223121-1223365:1:exon

position:1223121:1
position: 1223121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223365:1
position: 1223365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1223689-1223762:1:exon

position:1223689:1
position: 1223689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223762:1
position: 1223762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1223874-1223924:1:exon

position:1223874:1
position: 1223874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223924:1
position: 1223924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1224064-1224766:1:exon

position:1224064:1
position: 1224064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1224766:1
position: 1224766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1225429-1225919:1:exon

position:1225429:1
position: 1225429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225919:1
position: 1225919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1226087-1226210:1:exon

position:1226087:1
position: 1226087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226210:1
position: 1226210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1227251-1227640:1:exon

position:1227251:1
position: 1227251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227640:1
position: 1227640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1227781-1229737:1:exon

position:1227781:1
position: 1227781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229737:1
position: 1229737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1229830-1229953:1:exon

position:1229830:1
position: 1229830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229953:1
position: 1229953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1230047-1230134:1:exon

position:1230047:1
position: 1230047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230134:1
position: 1230134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1230282-1230348:1:exon

position:1230282:1
position: 1230282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230348:1
position: 1230348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1230500-1230732:1:exon

position:1230500:1
position: 1230500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230732:1
position: 1230732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1231387-1233435:1:exon

position:1231387:1
position: 1231387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233435:1
position: 1233435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1233516-1234556:1:exon

position:1233516:1
position: 1233516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234556:1
position: 1234556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1234638-1234752:1:exon

position:1234638:1
position: 1234638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234752:1
position: 1234752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1234807-1234835:1:exon

position:1234807:1
position: 1234807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1234835:1
position: 1234835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1234911-1235075:1:exon

position:1234911:1
position: 1234911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235075:1
position: 1235075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1235162-1235318:1:exon

position:1235162:1
position: 1235162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235318:1
position: 1235318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1235430-1235511:1:exon

position:1235430:1
position: 1235430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235511:1
position: 1235511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1235605-1235780:1:exon

position:1235605:1
position: 1235605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235780:1
position: 1235780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:1236117-1236265:1:exon

position:1236117:1
position: 1236117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236265:1
position: 1236265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:1236371-1236506:1:exon

position:1236371:1
position: 1236371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236506:1
position: 1236506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:1236587-1236723:1:exon

position:1236587:1
position: 1236587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1236723:1
position: 1236723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:1237006-1237131:1:exon

position:1237006:1
position: 1237006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237131:1
position: 1237131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:1237237-1237372:1:exon

position:1237237:1
position: 1237237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237372:1
position: 1237372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:1237453-1237589:1:exon

position:1237453:1
position: 1237453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237589:1
position: 1237589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:1237872-1239042:1:exon

position:1237872:1
position: 1237872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239042:1
position: 1239042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:1239755-1239891:1:exon

position:1239755:1
position: 1239755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239891:1
position: 1239891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:1239985-1240115:1:exon

position:1239985:1
position: 1239985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240115:1
position: 1240115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:1240202-1240487:1:exon

position:1240202:1
position: 1240202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240487:1
position: 1240487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:1240884-1240957:1:exon

position:1240884:1
position: 1240884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240957:1
position: 1240957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:1241061-1241169:1:exon

position:1241061:1
position: 1241061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241169:1
position: 1241169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:1241281-1241535:1:exon

position:1241281:1
position: 1241281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KMT2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KMT2D
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2D
translation: MKTLRLLCPEHLAEAVDMEDARCSACDGPGELRDLVLCTSCGQHFHGACLGISLTPRKRSGWQCPECKVCQTCRQRGQDSAMLVCEACDKGYHTSCMEPATQGLPTGSWKCKNCWVCSDCGRHPSGLDSSCHWSPWSAVCGDCQQRRATADVPTEPQHSPQPDPPAQMSESPAPSEPTDAPVPPPELEPVGGDEEIQPLVDPKEAPPDPNKIPPDPEEASPDPKEAPPGSAEPPPGELASVEVLPSEGPPEDLPSAELPPDQPPPDTQPSDIQPPDVQPPEEPLALMLPPEEPPSEELPLETPSLAELPPDRPSPEELPPSEPPHNELPLDVPPLAELPPEKPAFEKSPSHELPPEVLPIDKSPPDELPPSESPPPTSRSSLSSTLRSCPPTSRPLRNYPPRSPPSRSYPPRSCPSRNYPPRTPLPLEELPPSEPPPIELLPEEPPPKALPPEKLSPEEPPVVELPSEELVPSELHPEEDLKPPGLLPEVTVAEEAPALAPEVLPEEEMELEPEPSLPPEMTPPPSAPPALRAISPARTPAPSPDAKEDEVLEPPTPALPEPPGSPGTAMDTDPPGSPPPPLGSPAVTLAPAEPPEDEEMEMAGGEGESPASPPGDAPHGSPAPELGPFPSLPEEEEEEEEEAPRLEREGTSGSSPPLSEEDALEEARAGGDPEVKGSPSGSPLLLEPEELGPETPMEVCTTNEKLLGHGDEGCPEPPALRPRPDILNEISNLSQGDTSSSFPGSEPLLGSPDPEGGGSLSPELGPASADASLQKEDAGSLPLGAETDDSLLFEPAAKGDGDKSRRRSSPGRSRVKQGRSSSFPGRRRPRGGSHGGRGRGRARLKSTTSSVDTLALADVESSPSKEEDEDDDDTMQNTVVLFSNTDKFVLMQDMCVVCGSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKGWRCVECIVCEVCGKASDPSRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVCCVQCGAANPGFHCEWQNNYTHCAPCASLVVCPFCREKYVEDDLLIQCRHCDRWLHAACDSLFTEEEVEQAADEGFDCSACQPYVVKPVPPPSAEMIKAKDPEPQYFRFEGVWLTETGMAVLRNLTLSPLHKRRQRKGRPGTLNGDGGLEGGDPLGPEDKKDGDLDTDELLKAEVGVEHMECEIKLEAPASPDRDVGADGDSGKGLEDPEECKKRKRKPYRPGIGGFMVRQRKSHTRLKKVSAAPPDVGREGLSAEGHPEEGAPGDVPAEAGLDPGSGEGDEKKKRRGRKKSKLEDMFPPYLQEAFFGKALMDLSRKALLAAGGVGDGAARPSLGQGAPRPKGDLSLTGALQGGTLDRRETPTHPRGDDSTDGSAAAPDDDGKDDAKAEDLGADEPKDSPDRGDTEKPATPGEGALSSDLDKIPTEELPKMESKDVQQLFKDVLGSAERGEQPLNCVAAGMEAGQDPSRAQRPFLQGDLQLSGQGSVSLGSLSGSVSLDSYSGVCQSPFLDNRERSGFFSPDHCEPESPWASSSAATTPSTPTTPTTEGEGDGLSYNQRSLQRWEKDEELGELSTISPVLYANMNFPNLKQDYPDWSSRCKQIMKLWRKVPATDKAPYLQKAKDNRAAHRINKVQKQAESQINKQTKGEGLRKPERPSLHLRIPVPSGAQPVYISSPPAAGEGFLKPPAGAGGGPESPSELFLKLPPQSPAQVPSHDPYGAASAFSLEPRFPSPLGQSPTSGAAFQPXFLPTPPGTPRHQPGTPDPFLKPRCPSLDNLSVPGSPGARPPEALLSPLPFGEQKKGLEVKKEDGGSLGVCSPGYTSAMGYGDSPGGPHLSAAELKAADVFKAPMTPRVSQVEPQSPGLGHRPPAAAGPQPPFARSPGASVFAGSQPPMRFTFPPAVSEPLKGSPSHQPHGINSHYGSGKPQSSAYASSPSFHQASSPLGPGTAAHDSYSLSPLRPPSVLPPQPPAPPQQQDPSGAFLPRAALGLTADKREEVAAGLSAPPNR…
SIO_010081: KMT2D
subclass of: SO_0000673
so part of: KMT2D
location: join(1213230..1213284,1213384..1213549,1213632..1213746,1213826..1213992,1214121..1214884,1215225..1215412,1215653..1215691,1215731..1215824,1215914..1216776,1216858..1216971,1217292..1217402,1217507..1217611,1217824..1218005,1218081..1218245,1218336..1218442,1218534..1218575,1218671..1218886,1218970..1219113,1219203..1219319,1220428..1220552,1220635..1220824,1221867..1221941,1222258..1222362,1222475..1222648,1222943..1223027,1223121..1223365,1223689..1223762,1223874..1223924,1224064..1224766,1225429..1225919,1226087..1226210,1227251..1227640,1227781..1229737,1229830..1229953,1230047..1230134,1230282..1230348,1230500..1230732,1231387..1233435,1233516..1234556,1234638..1234752,1234807..1234835,1234911..1235075,1235162..1235318,1235430..1235511,1235605..1235780,1236117..1236265,1236371..1236506,1236587..1236723,1237006..1237131,1237237..1237372,1237453..1237589,1237872..1239042,1239755..1239891,1239985..1240115,1240202..1240487,1240884..1240957,1241061..1241169,1241281..1241373)
location: region:1213230-1241373:1
so has part: feature:1213230-1213284:1:exon
so has part: feature:1213384-1213549:1:exon
so has part: feature:1213632-1213746:1:exon
so has part: feature:1213826-1213992:1:exon
so has part: feature:1214121-1214884:1:exon
so has part: feature:1215225-1215412:1:exon
so has part: feature:1215653-1215691:1:exon
so has part: feature:1215731-1215824:1:exon
so has part: feature:1215914-1216776:1:exon
so has part: feature:1216858-1216971:1:exon
so has part: feature:1217292-1217402:1:exon
so has part: feature:1217507-1217611:1:exon
so has part: feature:1217824-1218005:1:exon
so has part: feature:1218081-1218245:1:exon
so has part: feature:1218336-1218442:1:exon
so has part: feature:1218534-1218575:1:exon
so has part: feature:1218671-1218886:1:exon
so has part: feature:1218970-1219113:1:exon
so has part: feature:1219203-1219319:1:exon
so has part: feature:1220428-1220552:1:exon
so has part: feature:1220635-1220824:1:exon
so has part: feature:1221867-1221941:1:exon
so has part: feature:1222258-1222362:1:exon
so has part: feature:1222475-1222648:1:exon
so has part: feature:1222943-1223027:1:exon
so has part: feature:1223121-1223365:1:exon
so has part: feature:1223689-1223762:1:exon
so has part: feature:1223874-1223924:1:exon
so has part: feature:1224064-1224766:1:exon
so has part: feature:1225429-1225919:1:exon
so has part: feature:1226087-1226210:1:exon
so has part: feature:1227251-1227640:1:exon
so has part: feature:1227781-1229737:1:exon
so has part: feature:1229830-1229953:1:exon
so has part: feature:1230047-1230134:1:exon
so has part: feature:1230282-1230348:1:exon
so has part: feature:1230500-1230732:1:exon
so has part: feature:1231387-1233435:1:exon
so has part: feature:1233516-1234556:1:exon
so has part: feature:1234638-1234752:1:exon
so has part: feature:1234807-1234835:1:exon
so has part: feature:1234911-1235075:1:exon
so has part: feature:1235162-1235318:1:exon
so has part: feature:1235430-1235511:1:exon
so has part: feature:1235605-1235780:1:exon
so has part: feature:1236117-1236265:1:exon
so has part: feature:1236371-1236506:1:exon
so has part: feature:1236587-1236723:1:exon
so has part: feature:1237006-1237131:1:exon
so has part: feature:1237237-1237372:1:exon
so has part: feature:1237453-1237589:1:exon
so has part: feature:1237872-1239042:1:exon
so has part: feature:1239755-1239891:1:exon
so has part: feature:1239985-1240115:1:exon
so has part: feature:1240202-1240487:1:exon
so has part: feature:1240884-1240957:1:exon
so has part: feature:1241061-1241169:1:exon
so has part: feature:1241281-1241373:1:exon

XP_016160427.1
type: Protein
SIO_000068: ncbiprotein

position:1213230:1
position: 1213230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241373:1
position: 1241373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213230-1213284:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1213384-1213549:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1213632-1213746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213826-1213992:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1214121-1214884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215225-1215412:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215653-1215691:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1215731-1215824:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1215914-1216776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216858-1216971:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1217292-1217402:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1217507-1217611:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1217824-1218005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1218081-1218245:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1218336-1218442:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1218534-1218575:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1218671-1218886:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1218970-1219113:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1219203-1219319:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1220428-1220552:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1220635-1220824:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1221867-1221941:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1222258-1222362:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1222475-1222648:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1222943-1223027:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1223121-1223365:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1223689-1223762:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1223874-1223924:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1224064-1224766:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1225429-1225919:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1226087-1226210:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1227251-1227640:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1227781-1229737:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1229830-1229953:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1230047-1230134:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1230282-1230348:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1230500-1230732:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1231387-1233435:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1233516-1234556:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1234638-1234752:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1234807-1234835:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1234911-1235075:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1235162-1235318:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1235430-1235511:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1235605-1235780:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1236117-1236265:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1236371-1236506:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1236587-1236723:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1237006-1237131:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1237237-1237372:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1237453-1237589:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1237872-1239042:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1239755-1239891:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1239985-1240115:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1240202-1240487:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1240884-1240957:1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:1241061-1241169:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:1241281-1241373:1:exon

PRKAG1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PRKAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1246234..1250635
location: region:1246234-1250635:1
so has part: feature:1246234-1250635:1:exon
subclass of: SO_0000010

101811942
type: Gene
SIO_000068: ncbigene

position:1246234:1
position: 1246234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250635:1
position: 1250635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246234-1250635:1:exon

PRKAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PRKAG1
product: protein kinase AMP-activated non-catalytic subunit gamma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061368.1
SIO_010081: PRKAG1
subclass of: SO_0000673
so part of: PRKAG1
location: join(1246234..1246245,1246339..1246411,1246791..1246894,1246969..1247046,1247617..1247728,1247816..1247870,1247957..1248083,1249090..1249255,1249365..1249402,1249918..1250064,1250200..1250635)
location: region:1246234-1250635:1
so has part: feature:1246234-1246245:1:exon
so has part: feature:1246339-1246411:1:exon
so has part: feature:1246791-1246894:1:exon
so has part: feature:1246969-1247046:1:exon
so has part: feature:1247617-1247728:1:exon
so has part: feature:1247816-1247870:1:exon
so has part: feature:1247957-1248083:1:exon
so has part: feature:1249090-1249255:1:exon
so has part: feature:1249365-1249402:1:exon
so has part: feature:1249918-1250064:1:exon
so has part: feature:1250200-1250635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1246234-1246245:1:exon

position:1246245:1
position: 1246245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1246339-1246411:1:exon

position:1246339:1
position: 1246339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246411:1
position: 1246411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1246791-1246894:1:exon

position:1246791:1
position: 1246791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246894:1
position: 1246894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1246969-1247046:1:exon

position:1246969:1
position: 1246969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247046:1
position: 1247046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1247617-1247728:1:exon

position:1247617:1
position: 1247617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247728:1
position: 1247728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1247816-1247870:1:exon

position:1247816:1
position: 1247816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247870:1
position: 1247870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1247957-1248083:1:exon

position:1247957:1
position: 1247957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248083:1
position: 1248083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1249090-1249255:1:exon

position:1249090:1
position: 1249090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249255:1
position: 1249255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1249365-1249402:1:exon

position:1249365:1
position: 1249365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249402:1
position: 1249402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1249918-1250064:1:exon

position:1249918:1
position: 1249918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250064:1
position: 1250064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1250200-1250635:1:exon

position:1250200:1
position: 1250200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRKAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PRKAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-AMP-activated protein kinase subunit gamma-1
translation: MEDPDPDPGPGPAAESPAELSPPGLEGDTHRGAYTAFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFLGSACPTSPWVGDLGFSSFSSQVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPDSGNTLYILTHKRILKFLKLFIAEVPKPEFMAQTLEELQIGTYSNIAVVGTSTPIYVALGIFVQHRVSALPVVDDSGRVVDIYSKFDVINLAAEKTYNNLDVTVTRALQHRSHYFEGVLKCYKHETLETIINRLVEAEVHRLVVVDESDVVKGIVSLSDILQALVLPQGP
SIO_010081: PRKAG1
subclass of: SO_0000673
so part of: PRKAG1
location: join(1246240..1246245,1246339..1246411,1246791..1246894,1246969..1247046,1247617..1247728,1247816..1247870,1247957..1248083,1249090..1249255,1249365..1249402,1249918..1250064,1250200..1250298)
location: region:1246240-1250298:1
so has part: feature:1246240-1246245:1:exon
so has part: feature:1246339-1246411:1:exon
so has part: feature:1246791-1246894:1:exon
so has part: feature:1246969-1247046:1:exon
so has part: feature:1247617-1247728:1:exon
so has part: feature:1247816-1247870:1:exon
so has part: feature:1247957-1248083:1:exon
so has part: feature:1249090-1249255:1:exon
so has part: feature:1249365-1249402:1:exon
so has part: feature:1249918-1250064:1:exon
so has part: feature:1250200-1250298:1:exon

XP_005061425.1
type: Protein
SIO_000068: ncbiprotein

position:1246240:1
position: 1246240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250298:1
position: 1250298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1246240-1246245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1246339-1246411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1246791-1246894:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1246969-1247046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1247617-1247728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1247816-1247870:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1247957-1248083:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1249090-1249255:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1249365-1249402:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1249918-1250064:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1250200-1250298:1:exon

WNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: WNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1261884..1268862)
location: region:1261884-1268862:-1
so has part: feature:1261884-1268862:-1:exon
subclass of: SO_0000010

101817901
type: Gene
SIO_000068: ncbigene

position:1261884:-1
position: 1261884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268862:-1
position: 1268862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261884-1268862:-1:exon

WNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WNT1
product: Wnt family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061399.1
SIO_010081: WNT1
subclass of: SO_0000673
so part of: WNT1
location: complement(join(1261884..1262372,1262607..1262872,1263068..1263382,1265148..1265666,1268475..1268610,1268686..1268862))
location: region:1261884-1268862:-1
so has part: feature:1268686-1268862:-1:exon
so has part: feature:1268475-1268610:-1:exon
so has part: feature:1265148-1265666:-1:exon
so has part: feature:1263068-1263382:-1:exon
so has part: feature:1262607-1262872:-1:exon
so has part: feature:1261884-1262372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268686-1268862:-1:exon

position:1268686:-1
position: 1268686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1268475-1268610:-1:exon

position:1268475:-1
position: 1268475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268610:-1
position: 1268610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1265148-1265666:-1:exon

position:1265148:-1
position: 1265148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265666:-1
position: 1265666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1263068-1263382:-1:exon

position:1263068:-1
position: 1263068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1263382:-1
position: 1263382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1262607-1262872:-1:exon

position:1262607:-1
position: 1262607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262872:-1
position: 1262872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1261884-1262372:-1:exon

position:1262372:-1
position: 1262372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene Wnt-1
translation: MVTAALAPRPDPAGAWGRLGEALKSAGVELRGPPCVGEGGLQGSGIVMTWGDAGFGGSQLHTGGCKDGDPERPPLHPAKGQPRALHWGKLRQGCRPPRGVLSPHPRAPRPVEPRTGGFTPSHNRPGRGMTGTVLSQPRQHQCSGRGHLRPPPASVRAAPALPSMPCYPSIPPPVHPYLRHLVPAQTGRSGAAGDVRGRAAPTRVVDTVGVHGHVRGGPGCRRDSPGQRGLEQLEEAVAPSHRARTRTEQGSVGSGGAPTQPRRSTSRGTACPVPQKAGEAGGAGDPPASGHHPHLCHRGIINVASSTNLLTDSKNVQLVLDPSLQLLSRKQRKLIRQNPGILHSVSSGLQTAIKECKWQFRNRRWNCPTSQGPNIFGKIVNRGCRETAFIFAITSAGVTHSVARSCSEGSIESCTCDYRRRGPGGPDWHWGGCSDNIDFGRLFGREFVDSSEKGRDLRFLMNLHNNEAGRMTVFSEMRQECKCHGMSGSCTVRTCWMRLPTFRAVGDVLKDRFDGASRVIYGNKGSNRASRVELHHLEPENPAHKPPSPHDLVYFEKSPNFCTYSGKMGTAGTAGRFCNSSSPGLDGCELLCCGRGYRTRTQRVTERCNCTFHWCCHVSCLNCTNTQVLHECL
SIO_010081: WNT1
subclass of: SO_0000673
so part of: WNT1
location: complement(join(1261884..1262372,1262607..1262872,1263068..1263382,1265148..1265666,1268475..1268610,1268686..1268862))
location: region:1261884-1268862:-1
so has part: feature:1268686-1268862:-1:exon
so has part: feature:1268475-1268610:-1:exon
so has part: feature:1265148-1265666:-1:exon
so has part: feature:1263068-1263382:-1:exon
so has part: feature:1262607-1262872:-1:exon
so has part: feature:1261884-1262372:-1:exon

XP_005061456.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1268686-1268862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1268475-1268610:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1265148-1265666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1263068-1263382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1262607-1262872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1261884-1262372:-1:exon

ARF3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ARF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1268827..1270040
location: region:1268827-1270040:1
so has part: feature:1268827-1270040:1:exon
subclass of: SO_0000010

101811617
type: Gene
SIO_000068: ncbigene

position:1268827:1
position: 1268827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270040:1
position: 1270040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268827-1270040:1:exon

ARF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARF3
product: ADP ribosylation factor 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005061366.2
SIO_010081: ARF3
subclass of: SO_0000673
so part of: ARF3
location: join(1268827..1269008,1269119..1269438,1269833..1270040)
location: region:1268827-1270040:1
so has part: feature:1268827-1269008:1:exon
so has part: feature:1269119-1269438:1:exon
so has part: feature:1269833-1270040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268827-1269008:1:exon

position:1269008:1
position: 1269008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1269119-1269438:1:exon

position:1269119:1
position: 1269119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269438:1
position: 1269438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1269833-1270040:1:exon

position:1269833:1
position: 1269833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARF3
product: ADP ribosylation factor 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005061367.2
SIO_010081: ARF3
subclass of: SO_0000673
so part of: ARF3
location: join(1268827..1269008,1269119..1269229,1269314..1269438,1269833..1270040)
location: region:1268827-1270040:1
so has part: feature:1268827-1269008:1:exon
so has part: feature:1269119-1269229:1:exon
so has part: feature:1269314-1269438:1:exon
so has part: feature:1269833-1270040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268827-1269008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1269119-1269229:1:exon

position:1269229:1
position: 1269229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1269314-1269438:1:exon

position:1269314:1
position: 1269314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1269833-1270040:1:exon

ARF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor 3 isoform X1
translation: MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGRCLRGHREGIWGAGWSQRPRQCPLLSPGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK
SIO_010081: ARF3
subclass of: SO_0000673
so part of: ARF3
location: join(1268861..1269008,1269119..1269438,1269833..1269994)
location: region:1268861-1269994:1
so has part: feature:1268861-1269008:1:exon
so has part: feature:1269119-1269438:1:exon
so has part: feature:1269833-1269994:1:exon

XP_005061423.1
type: Protein
SIO_000068: ncbiprotein

position:1268861:1
position: 1268861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269994:1
position: 1269994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268861-1269008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1269119-1269438:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269833-1269994:1:exon

ARF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor 3 isoform X2
translation: MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNKK
SIO_010081: ARF3
subclass of: SO_0000673
so part of: ARF3
location: join(1268861..1269008,1269119..1269229,1269314..1269438,1269833..1269994)
location: region:1268861-1269994:1
so has part: feature:1268861-1269008:1:exon
so has part: feature:1269119-1269229:1:exon
so has part: feature:1269314-1269438:1:exon
so has part: feature:1269833-1269994:1:exon

XP_005061424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1268861-1269008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1269119-1269229:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1269314-1269438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1269833-1269994:1:exon

LOC107604316
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1271336..1273653)
location: region:1271336-1273653:-1
so has part: feature:1271336-1273653:-1:exon
subclass of: SO_0000010

107604316
type: Gene
SIO_000068: ncbigene

position:1271336:-1
position: 1271336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273653:-1
position: 1273653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1271336-1273653:-1:exon

LOC107604316
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604316
product: basic proline-rich protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_016304942.1
SIO_010081: LOC107604316
subclass of: SO_0000673
so part of: LOC107604316
location: complement(join(1271336..1271483,1271857..1272437,1273498..1273653))
location: region:1271336-1273653:-1
so has part: feature:1273498-1273653:-1:exon
so has part: feature:1271857-1272437:-1:exon
so has part: feature:1271336-1271483:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1273498-1273653:-1:exon

position:1273498:-1
position: 1273498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1271857-1272437:-1:exon

position:1271857:-1
position: 1271857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1272437:-1
position: 1272437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1271336-1271483:-1:exon

position:1271483:-1
position: 1271483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107604316
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: basic proline-rich protein-like
translation: MPRSHPYSHSDSTTVPSHCPPRYRPIAHPGTTPGTAPVPAEVPPPVPVAVAPAVPALRGHPGGHRGPPLPGDRPGGFGPHRAVRVGVKAEGLRGGPGRGTRPRHRSGAAPVSWCRQCQQAAAQPGETGTHRGPGPLPGSRTLLQHPAGAAHSFSRHFPSPSPAGQGKQSPEPGLGDQRAGRSSEPAPEPPSPCLGMRSPWDRAENTGNPPGVAGSHRHTESSLDLPPRVCGDGLTGVTGPGAAPRWPWCWLCSSHPPGSPHHTPPVSPTVPQPPMQRGHGDGTAALAPNATQSP
SIO_010081: LOC107604316
subclass of: SO_0000673
so part of: LOC107604316
location: complement(join(1271336..1271483,1271857..1272437,1273498..1273653))
location: region:1271336-1273653:-1
so has part: feature:1273498-1273653:-1:exon
so has part: feature:1271857-1272437:-1:exon
so has part: feature:1271336-1271483:-1:exon

XP_016160428.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1273498-1273653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1271857-1272437:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1271336-1271483:-1:exon

FKBP11
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FKBP11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1274371..1275437
location: region:1274371-1275437:1
so has part: feature:1274371-1275437:1:exon
subclass of: SO_0000010

101817692
type: Gene
SIO_000068: ncbigene

position:1274371:1
position: 1274371
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1275437:1
position: 1275437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274371-1275437:1:exon

FKBP11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FKBP11
product: FK506 binding protein 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005061398.1
SIO_010081: FKBP11
subclass of: SO_0000673
so part of: FKBP11
location: join(<1274371..1274467,1274782..1274815,1274947..1275017,1275099..1275437)
location: region:1274371-1275437:1
so has part: feature:1274371-1274467:1:exon
so has part: feature:1274782-1274815:1:exon
so has part: feature:1274947-1275017:1:exon
so has part: feature:1275099-1275437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1274371-1274467:1:exon

position:1274467:1
position: 1274467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1274782-1274815:1:exon

position:1274782:1
position: 1274782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274815:1
position: 1274815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1274947-1275017:1:exon

position:1274947:1
position: 1274947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275017:1
position: 1275017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1275099-1275437:1:exon

position:1275099:1
position: 1275099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FKBP11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FKBP11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase FKBP11
translation: PPQGSLEDGRVIDSSLSRDPLQVELGKHQVIPGLEQSLLDMCVGEKRRAIIPPHLAYGKRGSPPTIPGDAVLRFEVELVGLSRASYWQKVVNEVVPLLCLGLVPALLGLIGFHLYRKASSPKLSKKKQKEEKRNKAKKK
SIO_010081: FKBP11
subclass of: SO_0000673
so part of: FKBP11
location: join(<1274371..1274467,1274782..1274815,1274947..1275017,1275099..1275316)
location: region:1274371-1275316:1
so has part: feature:1274371-1274467:1:exon
so has part: feature:1274782-1274815:1:exon
so has part: feature:1274947-1275017:1:exon
so has part: feature:1275099-1275316:1:exon

XP_005061455.1
type: Protein
SIO_000068: ncbiprotein

position:1275316:1
position: 1275316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1274371-1274467:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274782-1274815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1274947-1275017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275099-1275316:1:exon

CCDC65
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CCDC65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1275521..1279065)
location: region:1275521-1279065:-1
so has part: feature:1275521-1279065:-1:exon
subclass of: SO_0000010

101817502
type: Gene
SIO_000068: ncbigene

position:1275521:-1
position: 1275521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279065:-1
position: 1279065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275521-1279065:-1:exon

CCDC65
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CCDC65
product: coiled-coil domain containing 65
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061397.2
SIO_010081: CCDC65
subclass of: SO_0000673
so part of: CCDC65
location: complement(join(1275521..1275891,1276003..1276155,1276243..1276461,1276873..1277070,1277149..1277287,1277440..1277609,1277681..1277848,1278730..1278897,1279036..1279065))
location: region:1275521-1279065:-1
so has part: feature:1279036-1279065:-1:exon
so has part: feature:1278730-1278897:-1:exon
so has part: feature:1277681-1277848:-1:exon
so has part: feature:1277440-1277609:-1:exon
so has part: feature:1277149-1277287:-1:exon
so has part: feature:1276873-1277070:-1:exon
so has part: feature:1276243-1276461:-1:exon
so has part: feature:1276003-1276155:-1:exon
so has part: feature:1275521-1275891:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1279036-1279065:-1:exon

position:1279036:-1
position: 1279036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1278730-1278897:-1:exon

position:1278730:-1
position: 1278730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278897:-1
position: 1278897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1277681-1277848:-1:exon

position:1277681:-1
position: 1277681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277848:-1
position: 1277848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1277440-1277609:-1:exon

position:1277440:-1
position: 1277440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277609:-1
position: 1277609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1277149-1277287:-1:exon

position:1277149:-1
position: 1277149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277287:-1
position: 1277287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1276873-1277070:-1:exon

position:1276873:-1
position: 1276873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1277070:-1
position: 1277070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1276243-1276461:-1:exon

position:1276243:-1
position: 1276243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276461:-1
position: 1276461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1276003-1276155:-1:exon

position:1276003:-1
position: 1276003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276155:-1
position: 1276155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1275521-1275891:-1:exon

position:1275891:-1
position: 1275891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC65
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CCDC65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 65
translation: MGREGGGGHKPWRGHVQWRLSPPPPPPPASTVPTAAEAELLLLQKQALAEEEAAKAKRELLTRFLQDKLSHEEQSSRWGLHRVRTLWRSAQRQTKDQELRQDIEILSQTFSRVMDCKDGVIETLVRDLKEAEEQENRALRSHLHLTDQLLHLQRCRLGYLEEGFNAQVDALKAEFEAERRIILEQQDWESCCLRDMALASEQNHARNDHEAMLNFQSARDDIKNQCWQDQQYSRQQLGARLEGLWDQIQKARRSYAQATERKKVEFEELKKKCEKSSREIDAQTEKLQKLQDMVTSTKGQIAAHLQESEKQRQHLRDDKDLALQKLQKLRAQVSQAGARAHTHLVTLTCQCSATLKALQQLVEKAQRILRLAEMCRRLEKEEEKVLPFYPSSLAEWEQQKVQRVLEEIPNEPLAQAIMDYVGLEKFWQRFNKAKLEEKALEKAREALANRNQDLRRLLQQYLAGAATNQKVLKDPYPIFTVKRKLHPQK
SIO_010081: CCDC65
subclass of: SO_0000673
so part of: CCDC65
location: complement(join(1275667..1275891,1276003..1276155,1276243..1276461,1276873..1277070,1277149..1277287,1277440..1277609,1277681..1277848,1278730..1278897,1279036..1279065))
location: region:1275667-1279065:-1
so has part: feature:1279036-1279065:-1:exon
so has part: feature:1278730-1278897:-1:exon
so has part: feature:1277681-1277848:-1:exon
so has part: feature:1277440-1277609:-1:exon
so has part: feature:1277149-1277287:-1:exon
so has part: feature:1276873-1277070:-1:exon
so has part: feature:1276243-1276461:-1:exon
so has part: feature:1276003-1276155:-1:exon
so has part: feature:1275667-1275891:-1:exon

XP_005061454.1
type: Protein
SIO_000068: ncbiprotein

position:1275667:-1
position: 1275667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279036-1279065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1278730-1278897:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277681-1277848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277440-1277609:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1277149-1277287:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1276873-1277070:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1276243-1276461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1276003-1276155:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1275667-1275891:-1:exon

RND1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1279664..1289476
location: region:1279664-1289476:1
so has part: feature:1279664-1289476:1:exon
subclass of: SO_0000010

101817311
type: Gene
SIO_000068: ncbigene

position:1279664:1
position: 1279664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289476:1
position: 1289476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1279664-1289476:1:exon

RND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RND1
product: Rho family GTPase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005061396.1
SIO_010081: RND1
subclass of: SO_0000673
so part of: RND1
location: join(1279664..1279783,1279867..1279954,1282260..1282267,1286676..1286894,1289468..1289476)
location: region:1279664-1289476:1
so has part: feature:1279664-1279783:1:exon
so has part: feature:1279867-1279954:1:exon
so has part: feature:1282260-1282267:1:exon
so has part: feature:1286676-1286894:1:exon
so has part: feature:1289468-1289476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1279664-1279783:1:exon

position:1279783:1
position: 1279783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1279867-1279954:1:exon

position:1279867:1
position: 1279867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279954:1
position: 1279954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1282260-1282267:1:exon

position:1282260:1
position: 1282260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282267:1
position: 1282267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1286676-1286894:1:exon

position:1286676:1
position: 1286676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286894:1
position: 1286894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1289468-1289476:1:exon

position:1289468:1
position: 1289468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein Rho6
translation: MRERRPAPAAPARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLASEEQRVELSLWDTSGNPFWHTETPTLWGEAEGFGVPLVPESISPQWKTEILDYCPNTRVLLIGCKTDLRTDLSTLLELSHQKQAPVSYEQGH
SIO_010081: RND1
subclass of: SO_0000673
so part of: RND1
location: join(1279664..1279783,1279867..1279954,1282260..1282267,1286676..1286894,1289468..1289476)
location: region:1279664-1289476:1
so has part: feature:1279664-1279783:1:exon
so has part: feature:1279867-1279954:1:exon
so has part: feature:1282260-1282267:1:exon
so has part: feature:1286676-1286894:1:exon
so has part: feature:1289468-1289476:1:exon

XP_005061453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1279664-1279783:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279867-1279954:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282260-1282267:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1286676-1286894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1289468-1289476:1:exon

DDX23
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DDX23
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1290688..1300859
location: region:1290688-1300859:1
so has part: feature:1290688-1300859:1:exon
subclass of: SO_0000010

101811419
type: Gene
SIO_000068: ncbigene

position:1290688:1
position: 1290688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300859:1
position: 1300859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290688-1300859:1:exon

DDX23
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DDX23
product: DEAD-box helicase 23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016304976.1
SIO_010081: DDX23
subclass of: SO_0000673
so part of: DDX23
location: join(1290688..1290789,1291315..1291517,1291618..1291716,1291827..1291923,1292040..1292105,1292649..1292787,1292867..1292926,1293836..1293998,1294078..1294231,1294797..1295012,1295118..1295263,1297541..1297718,1297801..1298043,1298977..1299128,1299220..1299328,1299430..1299604,1300288..1300859)
location: region:1290688-1300859:1
so has part: feature:1290688-1290789:1:exon
so has part: feature:1291315-1291517:1:exon
so has part: feature:1291618-1291716:1:exon
so has part: feature:1291827-1291923:1:exon
so has part: feature:1292040-1292105:1:exon
so has part: feature:1292649-1292787:1:exon
so has part: feature:1292867-1292926:1:exon
so has part: feature:1293836-1293998:1:exon
so has part: feature:1294078-1294231:1:exon
so has part: feature:1294797-1295012:1:exon
so has part: feature:1295118-1295263:1:exon
so has part: feature:1297541-1297718:1:exon
so has part: feature:1297801-1298043:1:exon
so has part: feature:1298977-1299128:1:exon
so has part: feature:1299220-1299328:1:exon
so has part: feature:1299430-1299604:1:exon
so has part: feature:1300288-1300859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290688-1290789:1:exon

position:1290789:1
position: 1290789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291315-1291517:1:exon

position:1291315:1
position: 1291315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291517:1
position: 1291517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1291618-1291716:1:exon

position:1291618:1
position: 1291618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291716:1
position: 1291716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1291827-1291923:1:exon

position:1291827:1
position: 1291827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291923:1
position: 1291923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1292040-1292105:1:exon

position:1292040:1
position: 1292040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292105:1
position: 1292105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1292649-1292787:1:exon

position:1292649:1
position: 1292649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292787:1
position: 1292787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1292867-1292926:1:exon

position:1292867:1
position: 1292867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292926:1
position: 1292926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1293836-1293998:1:exon

position:1293836:1
position: 1293836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293998:1
position: 1293998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1294078-1294231:1:exon

position:1294078:1
position: 1294078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294231:1
position: 1294231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1294797-1295012:1:exon

position:1294797:1
position: 1294797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295012:1
position: 1295012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1295118-1295263:1:exon

position:1295118:1
position: 1295118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295263:1
position: 1295263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1297541-1297718:1:exon

position:1297541:1
position: 1297541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297718:1
position: 1297718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1297801-1298043:1:exon

position:1297801:1
position: 1297801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298043:1
position: 1298043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1298977-1299128:1:exon

position:1298977:1
position: 1298977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299128:1
position: 1299128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1299220-1299328:1:exon

position:1299220:1
position: 1299220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299328:1
position: 1299328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1299430-1299604:1:exon

position:1299430:1
position: 1299430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299604:1
position: 1299604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1300288-1300859:1:exon

position:1300288:1
position: 1300288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DDX23
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DDX23
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1294223..1294225,aa:OTHER)
product: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX23
translation: MAGELADKKDRDASPVKEERKRSRSPERERERDRDRKSSPAKERKRHRSRDRRRSRSRSRSRSKSTERDRRHKERDRDRSKKDRDRDKDGHRRDKDRKRSSLSPGRGKDSKSRKDREARKAEEEEENALKKEKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALRRRQQEVEERQRLLEEERKKRKQFQEMGRKMLEDPQERERRERRERMERETNGAGGDDGGGPTEAGVLQERYLGGVKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEXGFRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIHDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSTVFYDLKQAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
SIO_010081: DDX23
subclass of: SO_0000673
so part of: DDX23
location: join(1291315..1291517,1291618..1291716,1291827..1291923,1292040..1292105,1292649..1292787,1292867..1292926,1293836..1293998,1294078..1294231,1294797..1295012,1295118..1295263,1297541..1297718,1297801..1298043,1298977..1299128,1299220..1299328,1299430..1299604,1300288..1300511)
location: region:1291315-1300511:1
so has part: feature:1291315-1291517:1:exon
so has part: feature:1291618-1291716:1:exon
so has part: feature:1291827-1291923:1:exon
so has part: feature:1292040-1292105:1:exon
so has part: feature:1292649-1292787:1:exon
so has part: feature:1292867-1292926:1:exon
so has part: feature:1293836-1293998:1:exon
so has part: feature:1294078-1294231:1:exon
so has part: feature:1294797-1295012:1:exon
so has part: feature:1295118-1295263:1:exon
so has part: feature:1297541-1297718:1:exon
so has part: feature:1297801-1298043:1:exon
so has part: feature:1298977-1299128:1:exon
so has part: feature:1299220-1299328:1:exon
so has part: feature:1299430-1299604:1:exon
so has part: feature:1300288-1300511:1:exon

XP_016160462.1
type: Protein
SIO_000068: ncbiprotein

position:1300511:1
position: 1300511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1291315-1291517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291618-1291716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1291827-1291923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1292040-1292105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1292649-1292787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1292867-1292926:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1293836-1293998:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294078-1294231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294797-1295012:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295118-1295263:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1297541-1297718:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1297801-1298043:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1298977-1299128:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1299220-1299328:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1299430-1299604:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1300288-1300511:1:exon

LOC107604320
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1301192..1301999)
location: region:1301192-1301999:-1
so has part: feature:1301192-1301999:-1:exon
subclass of: SO_0000010

107604320
type: Gene
SIO_000068: ncbigene

position:1301192:-1
position: 1301192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301999:-1
position: 1301999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301192-1301999:-1:exon

LOC107604320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604320
product: chitin-binding lectin 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_016304977.1
SIO_010081: LOC107604320
subclass of: SO_0000673
so part of: LOC107604320
location: complement(join(1301192..1301332,1301408..1301999))
location: region:1301192-1301999:-1
so has part: feature:1301408-1301999:-1:exon
so has part: feature:1301192-1301332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1301408-1301999:-1:exon

position:1301408:-1
position: 1301408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1301192-1301332:-1:exon

position:1301332:-1
position: 1301332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107604320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chitin-binding lectin 1-like
translation: MPWDSPPKFWGTWGQTHAFALPQCPPTGSASQVGSFSAGQLPWTVGALPQKGERRRGGSCSSIPHPTQTRGRKGRCLLTPGTWPDPSPPLHGTPGRSGSQHSLRSAPTPPPRSPQPPRSCPPKWGGQSGGLNGVWGLLHACTHCPVPDVPTLSPHVTTVL
SIO_010081: LOC107604320
subclass of: SO_0000673
so part of: LOC107604320
location: complement(join(1301249..1301332,1301408..1301806))
location: region:1301249-1301806:-1
so has part: feature:1301408-1301806:-1:exon
so has part: feature:1301249-1301332:-1:exon

XP_016160463.1
type: Protein
SIO_000068: ncbiprotein

position:1301249:-1
position: 1301249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301806:-1
position: 1301806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301408-1301806:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1301249-1301332:-1:exon

CACNB3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CACNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1301988..1305025)
location: region:1301988-1305025:-1
so has part: feature:1301988-1305025:-1:exon
subclass of: SO_0000010

101811107
type: Gene
SIO_000068: ncbigene

position:1301988:-1
position: 1301988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305025:-1
position: 1305025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1301988-1305025:-1:exon

CACNB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CACNB3
product: calcium voltage-gated channel auxiliary subunit beta 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005061363.2
SIO_010081: CACNB3
subclass of: SO_0000673
so part of: CACNB3
location: complement(join(1301988..1302284,1302690..1302839,1302922..1303017,1303091..1303242,1303355..1303464,1303549..1303607,1303802..1303882,1304116..1304135,1304227..1304291,1304359..1304474,1304551..1304673,1304757..1305025))
location: region:1301988-1305025:-1
so has part: feature:1304757-1305025:-1:exon
so has part: feature:1304551-1304673:-1:exon
so has part: feature:1304359-1304474:-1:exon
so has part: feature:1304227-1304291:-1:exon
so has part: feature:1304116-1304135:-1:exon
so has part: feature:1303802-1303882:-1:exon
so has part: feature:1303549-1303607:-1:exon
so has part: feature:1303355-1303464:-1:exon
so has part: feature:1303091-1303242:-1:exon
so has part: feature:1302922-1303017:-1:exon
so has part: feature:1302690-1302839:-1:exon
so has part: feature:1301988-1302284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1304757-1305025:-1:exon

position:1304757:-1
position: 1304757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1304551-1304673:-1:exon

position:1304551:-1
position: 1304551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304673:-1
position: 1304673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1304359-1304474:-1:exon

position:1304359:-1
position: 1304359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304474:-1
position: 1304474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1304227-1304291:-1:exon

position:1304227:-1
position: 1304227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304291:-1
position: 1304291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1304116-1304135:-1:exon

position:1304116:-1
position: 1304116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1304135:-1
position: 1304135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1303802-1303882:-1:exon

position:1303802:-1
position: 1303802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1303882:-1
position: 1303882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1303549-1303607:-1:exon

position:1303549:-1
position: 1303549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1303607:-1
position: 1303607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1303355-1303464:-1:exon

position:1303355:-1
position: 1303355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1303464:-1
position: 1303464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1303091-1303242:-1:exon

position:1303091:-1
position: 1303091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1303242:-1
position: 1303242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1302922-1303017:-1:exon

position:1302922:-1
position: 1302922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1303017:-1
position: 1303017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1302690-1302839:-1:exon

position:1302690:-1
position: 1302690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302839:-1
position: 1302839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1301988-1302284:-1:exon

position:1302284:-1
position: 1302284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CACNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent L-type calcium channel subunit beta-3
translation: MAPWTPGGWGGSVGSPPEAGAAPSTRSRFVGVPLTAPRHSAPFPQGSAESYTSRPSLDSDVSLEEDREGARREVESQAQQQLERAKHKPVAFAVRTNVSYCGALDEECPVQGAAINFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLEAMRLKQEQKARRAGNASGLGDSGSRRSPPPSLAKQKQKQTQHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITHITADLSLAKRSILNNLGKQAILERSTTRSSIAEVQSEIERIFELAKSLQLVVLDADTINHPAQLAKTSLAPIIVYVKVSSPKVLQRLIKSRGKSQVKHLNVQMMAADKLVQCPPELFDVILDENQLEDACEHLAEYLEVYWRATHHPPHAPHAVPSPTGLPGLQSQQLLGERGEHSPLEHDSLMPSDEAGDTSPQPWGAASQRSSRHLEEEEEYGDPYPDLYQPHRHHGSGPGTPERPSERNHDRNWQRSRPWAKDSY
SIO_010081: CACNB3
subclass of: SO_0000673
so part of: CACNB3
location: complement(join(1302000..1302284,1302690..1302839,1302922..1303017,1303091..1303242,1303355..1303464,1303549..1303607,1303802..1303882,1304116..1304135,1304227..1304291,1304359..1304474,1304551..1304673,1304757..1305014))
location: region:1302000-1305014:-1
so has part: feature:1304757-1305014:-1:exon
so has part: feature:1304551-1304673:-1:exon
so has part: feature:1304359-1304474:-1:exon
so has part: feature:1304227-1304291:-1:exon
so has part: feature:1304116-1304135:-1:exon
so has part: feature:1303802-1303882:-1:exon
so has part: feature:1303549-1303607:-1:exon
so has part: feature:1303355-1303464:-1:exon
so has part: feature:1303091-1303242:-1:exon
so has part: feature:1302922-1303017:-1:exon
so has part: feature:1302690-1302839:-1:exon
so has part: feature:1302000-1302284:-1:exon

XP_005061420.1
type: Protein
SIO_000068: ncbiprotein

position:1302000:-1
position: 1302000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305014:-1
position: 1305014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304757-1305014:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1304551-1304673:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1304359-1304474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1304227-1304291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1304116-1304135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1303802-1303882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1303549-1303607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1303355-1303464:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303091-1303242:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1302922-1303017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1302690-1302839:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1302000-1302284:-1:exon

ADCY6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ADCY6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1312288..1323836
location: region:1312288-1323836:1
so has part: feature:1312288-1323836:1:exon
subclass of: SO_0000010

101810909
type: Gene
SIO_000068: ncbigene

position:1312288:1
position: 1312288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition