Ficedula albicollis isolate OC2 chromosome 24, FicAlb1.5, whole genome shotgun sequence.
type: Entry
definition: Ficedula albicollis isolate OC2 chromosome 24, FicAlb1.5, whole genome shotgun sequence.
sequence version: NC_021695.1
sequence date: 2016-04-20
sequence: sequence
division: CON
label: NC_021695.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA208061
dblink: SAMN02981387
keyword: WGS
keyword: RefSeq
source: Ficedula albicollis (collared flycatcher)
organism: Ficedula albicollis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
reference: 1
references: 23103876
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002012.1.\nAssembly name: FicAlb1.5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Uppsala University on 2013/06/24.\nThe original whole-genome shotgun project has the accession\nAGTO00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: FicAlb1.5\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina GAII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Ficedula albicollis Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 8009359
topology: linear
so has quality: SO_0000987
location: 1..8009359
location: region:1-8009359:1
RO_0002162: 59894

NC_021695
type: RefSeq
SIO_000068: refseq

PRJNA208061
type: BioProject
SIO_000068: bioproject

SAMN02981387
type: BioSample
SIO_000068: biosample

1
title: The genomic landscape of species divergence in Ficedula flycatchers
author: Ellegren, H.
author: Smeds, L.
author: Burri, R.
author: Olason, P.I.
author: Backstrom, N.
author: Kawakami, T.
author: Kunstner, A.
author: Makinen, H.
author: Nadachowska-Brzyska, K.
author: Qvarnstrom, A.
author: Uebbing, S.
author: Wolf, J.B.
journal: Nature
volume: 491
issue: 7426
pages: 756-760
year: 2012
pubmed: 23103876

23103876
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8009359:1
position: 8009359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-8009359:1:source
so part of: sequence
organism: Ficedula albicollis
mol type: genomic DNA
isolate: OC2
chromosome: 24
sex: male
country: Sweden: Oland
collection date: 2009

59894
type: Taxonomy
SIO_000068: taxonomy

C2CD2L
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8822..28795)
location: region:8822-28795:-1
so has part: feature:8822-28795:-1:exon
subclass of: SO_0000010

101813507
type: Gene
SIO_000068: ncbigene

position:8822:-1
position: 8822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28795:-1
position: 28795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8822-28795:-1:exon

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: C2CD2L
product: C2CD2 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303809.1
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(8822..14405,15803..16085,16560..16693,17324..17425,18782..18953,19255..19382,19981..20045,20556..20679,20844..20967,21586..21699,22574..22684,24584..24703,25075..25170,27874..28029,28664..28795))
location: region:8822-28795:-1
so has part: feature:28664-28795:-1:exon
so has part: feature:27874-28029:-1:exon
so has part: feature:25075-25170:-1:exon
so has part: feature:24584-24703:-1:exon
so has part: feature:22574-22684:-1:exon
so has part: feature:21586-21699:-1:exon
so has part: feature:20844-20967:-1:exon
so has part: feature:20556-20679:-1:exon
so has part: feature:19981-20045:-1:exon
so has part: feature:19255-19382:-1:exon
so has part: feature:18782-18953:-1:exon
so has part: feature:17324-17425:-1:exon
so has part: feature:16560-16693:-1:exon
so has part: feature:15803-16085:-1:exon
so has part: feature:8822-14405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28664-28795:-1:exon

position:28664:-1
position: 28664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27874-28029:-1:exon

position:27874:-1
position: 27874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28029:-1
position: 28029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:25075-25170:-1:exon

position:25075:-1
position: 25075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25170:-1
position: 25170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24584-24703:-1:exon

position:24584:-1
position: 24584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24703:-1
position: 24703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:22574-22684:-1:exon

position:22574:-1
position: 22574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22684:-1
position: 22684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21586-21699:-1:exon

position:21586:-1
position: 21586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21699:-1
position: 21699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:20844-20967:-1:exon

position:20844:-1
position: 20844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20967:-1
position: 20967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:20556-20679:-1:exon

position:20556:-1
position: 20556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20679:-1
position: 20679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:19981-20045:-1:exon

position:19981:-1
position: 19981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20045:-1
position: 20045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:19255-19382:-1:exon

position:19255:-1
position: 19255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19382:-1
position: 19382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:18782-18953:-1:exon

position:18782:-1
position: 18782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18953:-1
position: 18953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:17324-17425:-1:exon

position:17324:-1
position: 17324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17425:-1
position: 17425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:16560-16693:-1:exon

position:16560:-1
position: 16560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16693:-1
position: 16693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:15803-16085:-1:exon

position:15803:-1
position: 15803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16085:-1
position: 16085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8822-14405:-1:exon

position:14405:-1
position: 14405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C2 domain-containing protein 2-like
translation: MTPSRIERDARRKASFIGARKAVGHLGFRIAAPISEEKARSSREPAALRALRRRGAPAEEAGARALLAALLALRSLREQWQRAWVRALNSQARRHGSSVQITFEEGHQLPQAANISCVTCKGQSDHGIVLCCHLSAEAVKFPVSVTQQSPVAVSVDTYHVTLAVLQAQVEIHLEEIQNEGLLVSWTFKDRPDLDFLVLPRLELPADERRADLSTIKDLIEDTIVSTKPAMMVNLMACTAGASAVLSNKVTRESPSGVAAAAAPLSSKLLLRNLRVLNLDCQGKGGAGEIRCMAELDSPPQQKWTRPMTGSSVGAAGEMEWNDEFFLELGPRSKELKLQVLGNSDGGGNVLLAYATLLIDSLGKQPSGRQVCSLAPGAGQSLTAEATITLELLFQESSASLNAVHATSLRTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKADCKLDSPSRSPSKVEMTEKKTTVLLETGCPHTHLPSGSRDGHMPNGLDPVAETAIRQLTETNNKTTKKTPTKRSTLIISGVSKVPISQDEMALSLGYAASLEATACGDSEAEGTADHMHDFTELSRPLEALQLGQRDSQELDETTRSDISERPSVEDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRSKQKEVGLSQSHDDLSNVTANSTTRKKTGSFSHHLIKRFSFKSKSKPKGSDSTSACEN
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(14185..14405,15803..16085,16560..16693,17324..17425,18782..18953,19255..19382,19981..20045,20556..20679,20844..20967,21586..21699,22574..22684,24584..24703,25075..25170,27874..28029,28664..28795))
location: region:14185-28795:-1
so has part: feature:28664-28795:-1:exon
so has part: feature:27874-28029:-1:exon
so has part: feature:25075-25170:-1:exon
so has part: feature:24584-24703:-1:exon
so has part: feature:22574-22684:-1:exon
so has part: feature:21586-21699:-1:exon
so has part: feature:20844-20967:-1:exon
so has part: feature:20556-20679:-1:exon
so has part: feature:19981-20045:-1:exon
so has part: feature:19255-19382:-1:exon
so has part: feature:18782-18953:-1:exon
so has part: feature:17324-17425:-1:exon
so has part: feature:16560-16693:-1:exon
so has part: feature:15803-16085:-1:exon
so has part: feature:14185-14405:-1:exon

XP_016159295.1
type: Protein
SIO_000068: ncbiprotein

position:14185:-1
position: 14185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28664-28795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27874-28029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25075-25170:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24584-24703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:22574-22684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21586-21699:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:20844-20967:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:20556-20679:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19981-20045:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:19255-19382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:18782-18953:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:17324-17425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16560-16693:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15803-16085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:14185-14405:-1:exon

DPAGT1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 30508..37625
location: region:30508-37625:1
so has part: feature:30508-37625:1:exon
subclass of: SO_0000010

101806717
type: Gene
SIO_000068: ncbigene

position:30508:1
position: 30508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37625:1
position: 37625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30508-37625:1:exon

DPAGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DPAGT1
product: dolichyl-phosphate N-acetylglucosaminephosphotransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005058549.2
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(30508..30747,32759..32879,32965..33178,33714..33860,33993..34077,34832..35020,35803..35890,36242..36397,37069..37625)
location: region:30508-37625:1
so has part: feature:30508-30747:1:exon
so has part: feature:32759-32879:1:exon
so has part: feature:32965-33178:1:exon
so has part: feature:33714-33860:1:exon
so has part: feature:33993-34077:1:exon
so has part: feature:34832-35020:1:exon
so has part: feature:35803-35890:1:exon
so has part: feature:36242-36397:1:exon
so has part: feature:37069-37625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:30508-30747:1:exon

position:30747:1
position: 30747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32759-32879:1:exon

position:32759:1
position: 32759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32879:1
position: 32879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:32965-33178:1:exon

position:32965:1
position: 32965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33178:1
position: 33178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33714-33860:1:exon

position:33714:1
position: 33714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33860:1
position: 33860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34077:1:exon

position:33993:1
position: 33993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34077:1
position: 34077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:34832-35020:1:exon

position:34832:1
position: 34832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35020:1
position: 35020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:35803-35890:1:exon

position:35803:1
position: 35803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35890:1
position: 35890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:36242-36397:1:exon

position:36242:1
position: 36242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36397:1
position: 36397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:37069-37625:1:exon

position:37069:1
position: 37069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPAGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
translation: MAAWPAVPLLINLGGSLLGFAATLTLIPAFTEHFLAARLFGEDLNKTSRRPIPEAQGVISGAVFLIILFCFIPVPFLRCFVEEQCAAFPHNEFVELIGSLLAICCMIFLGFADDVLNLRWRHKLLLPTMASLPLLMVYFTNFGNTTIVVPKPLRVLLGMHLDLGILYYVYMGMLAVFCTNAINILAGINGIEAGQSLVIAASIIIFNIVELNGDYRDDHIFSLYFMIPFFFTTLGLFYHNWYPARVFVGDTFCYFAGMTFAVVGILGHFSKTMLLFFIPQVLNFLYSLPQLFHVIPCPRHRLPRLNPGTGKLEMSYSKFKSKSLSAMGTNILKVVKILHIVDVKSGTDEDGEYTECNNMTLINFVIKLIGPTHERNLTLLLLLIQVLGSTIAFSIRYQLVRLFYDV
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(30593..30747,32759..32879,32965..33178,33714..33860,33993..34077,34832..35020,35803..35890,36242..36397,37069..37134)
location: region:30593-37134:1
so has part: feature:30593-30747:1:exon
so has part: feature:32759-32879:1:exon
so has part: feature:32965-33178:1:exon
so has part: feature:33714-33860:1:exon
so has part: feature:33993-34077:1:exon
so has part: feature:34832-35020:1:exon
so has part: feature:35803-35890:1:exon
so has part: feature:36242-36397:1:exon
so has part: feature:37069-37134:1:exon

XP_005058606.1
type: Protein
SIO_000068: ncbiprotein

position:30593:1
position: 30593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37134:1
position: 37134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30593-30747:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32759-32879:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:32965-33178:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33714-33860:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33993-34077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34832-35020:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:35803-35890:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:36242-36397:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:37069-37134:1:exon

LOC101806917
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101806917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 38622..39784
location: region:38622-39784:1
so has part: feature:38622-39784:1:exon
subclass of: SO_0000010

101806917
type: Gene
SIO_000068: ncbigene

position:38622:1
position: 38622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39784:1
position: 39784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38622-39784:1:exon

LOC101806917
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101806917
product: histone H2A-beta, sperm
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303847.1
SIO_010081: LOC101806917
subclass of: SO_0000673
so part of: LOC101806917
location: 38622..39784
location: region:38622-39784:1
so has part: feature:38622-39784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38622-39784:1:exon

LOC101806917
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101806917
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:39290..39292,aa:OTHER)
product: LOW QUALITY PROTEIN: histone H2A-beta, sperm
translation: MSGEGTSRDAAPPKAKAKTRTARAGLVFSVGRCERQLREGNYAKXLGSPATVYMAAVLEYLTAEILELAGNAARHYKKHRITPRHIQLAVRHDEELNKLLSGVIIREGGVVSSVHPALLPRKTSKKRSKSQED
SIO_010081: LOC101806917
subclass of: SO_0000673
so part of: LOC101806917
location: 39158..39559
location: region:39158-39559:1
so has part: feature:39158-39559:1:exon

XP_016159333.1
type: Protein
SIO_000068: ncbiprotein

position:39158:1
position: 39158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39559:1
position: 39559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39158-39559:1:exon

HMBS
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(40976..51126)
location: region:40976-51126:-1
so has part: feature:40976-51126:-1:exon
subclass of: SO_0000010

101807108
type: Gene
SIO_000068: ncbigene

position:40976:-1
position: 40976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51126:-1
position: 51126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40976-51126:-1:exon

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005058550.2
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(40976..41283,41496..41582,42738..42791,43020..43139,44035..44073,44591..44704,45400..45475,46100..46177,46502..46579,48455..48510,48613..48662,49320..49392,50914..51126))
location: region:40976-51126:-1
so has part: feature:50914-51126:-1:exon
so has part: feature:49320-49392:-1:exon
so has part: feature:48613-48662:-1:exon
so has part: feature:48455-48510:-1:exon
so has part: feature:46502-46579:-1:exon
so has part: feature:46100-46177:-1:exon
so has part: feature:45400-45475:-1:exon
so has part: feature:44591-44704:-1:exon
so has part: feature:44035-44073:-1:exon
so has part: feature:43020-43139:-1:exon
so has part: feature:42738-42791:-1:exon
so has part: feature:41496-41582:-1:exon
so has part: feature:40976-41283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50914-51126:-1:exon

position:50914:-1
position: 50914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49320-49392:-1:exon

position:49320:-1
position: 49320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49392:-1
position: 49392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48613-48662:-1:exon

position:48613:-1
position: 48613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48662:-1
position: 48662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48455-48510:-1:exon

position:48455:-1
position: 48455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48510:-1
position: 48510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:46502-46579:-1:exon

position:46502:-1
position: 46502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46579:-1
position: 46579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:46100-46177:-1:exon

position:46100:-1
position: 46100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46177:-1
position: 46177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:45400-45475:-1:exon

position:45400:-1
position: 45400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45475:-1
position: 45475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:44591-44704:-1:exon

position:44591:-1
position: 44591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44704:-1
position: 44704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44035-44073:-1:exon

position:44035:-1
position: 44035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44073:-1
position: 44073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:43020-43139:-1:exon

position:43020:-1
position: 43020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43139:-1
position: 43139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:42738-42791:-1:exon

position:42738:-1
position: 42738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42791:-1
position: 42791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:41496-41582:-1:exon

position:41496:-1
position: 41496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41582:-1
position: 41582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:40976-41283:-1:exon

position:41283:-1
position: 41283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016303941.1
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(40976..41283,41496..41582,42738..42791,43020..43139,44035..44073,44591..44704,45400..45475,46100..46177,48455..48510,48613..48665,49320..49392,50914..51126))
location: region:40976-51126:-1
so has part: feature:50914-51126:-1:exon
so has part: feature:49320-49392:-1:exon
so has part: feature:48613-48665:-1:exon
so has part: feature:48455-48510:-1:exon
so has part: feature:46100-46177:-1:exon
so has part: feature:45400-45475:-1:exon
so has part: feature:44591-44704:-1:exon
so has part: feature:44035-44073:-1:exon
so has part: feature:43020-43139:-1:exon
so has part: feature:42738-42791:-1:exon
so has part: feature:41496-41582:-1:exon
so has part: feature:40976-41283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50914-51126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49320-49392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48613-48665:-1:exon

position:48665:-1
position: 48665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48455-48510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46100-46177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45400-45475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44591-44704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44035-44073:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43020-43139:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42738-42791:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41496-41582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:40976-41283:-1:exon

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016303940.1
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(40976..41283,41496..41582,42738..42791,43020..43139,44035..44073,44591..44704,45400..45475,46100..46177,46502..46579,48455..48510,48613..48665,49320..49392,50914..51126))
location: region:40976-51126:-1
so has part: feature:50914-51126:-1:exon
so has part: feature:49320-49392:-1:exon
so has part: feature:48613-48665:-1:exon
so has part: feature:48455-48510:-1:exon
so has part: feature:46502-46579:-1:exon
so has part: feature:46100-46177:-1:exon
so has part: feature:45400-45475:-1:exon
so has part: feature:44591-44704:-1:exon
so has part: feature:44035-44073:-1:exon
so has part: feature:43020-43139:-1:exon
so has part: feature:42738-42791:-1:exon
so has part: feature:41496-41582:-1:exon
so has part: feature:40976-41283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50914-51126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49320-49392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48613-48665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48455-48510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46502-46579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46100-46177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45400-45475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44591-44704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44035-44073:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43020-43139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42738-42791:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41496-41582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:40976-41283:-1:exon

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X2
translation: MAEPASAAVGLGRAESGGGSDGGDAAPVLPQGENGVDGRAIRVDGRAIRVGTRRSQLARIQTDSVVTMLRELYPDLCFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTCLPPGFTIGAVCKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLGPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAFMKRLEGGCSVPVAVNTLLKDGQLYLTGAVYSLDGSDSLKETMQTGVNYPCLNEDGPNDDVQHVGITAKNVPGQAQEAAENLGVELAGLLLSKGAKHILSVARQLSDAR
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(41110..41283,41496..41582,42738..42791,43020..43139,44035..44073,44591..44704,45400..45475,46100..46177,46502..46579,48455..48510,48613..48662,49320..49392,50914..51081))
location: region:41110-51081:-1
so has part: feature:50914-51081:-1:exon
so has part: feature:49320-49392:-1:exon
so has part: feature:48613-48662:-1:exon
so has part: feature:48455-48510:-1:exon
so has part: feature:46502-46579:-1:exon
so has part: feature:46100-46177:-1:exon
so has part: feature:45400-45475:-1:exon
so has part: feature:44591-44704:-1:exon
so has part: feature:44035-44073:-1:exon
so has part: feature:43020-43139:-1:exon
so has part: feature:42738-42791:-1:exon
so has part: feature:41496-41582:-1:exon
so has part: feature:41110-41283:-1:exon

XP_005058607.1
type: Protein
SIO_000068: ncbiprotein

position:41110:-1
position: 41110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51081:-1
position: 51081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50914-51081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49320-49392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48613-48662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48455-48510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46502-46579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46100-46177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45400-45475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44591-44704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44035-44073:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43020-43139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42738-42791:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41496-41582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41110-41283:-1:exon

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X3
translation: MAEPASAAVGLGRAESGGGSDGGDAAPVLPQGENGVDGRAIRVDGRAIRVGTRRSQLARIQTDSVVTMLRELYPDLCFEIAVAMSTTGDKILDTALSKIGEKSLFTKELENALERNERENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLGPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAFMKRLEGGCSVPVAVNTLLKDGQLYLTGAVYSLDGSDSLKETMQTGVNYPCLNEDGPNDDVQHVGITAKNVPGQAQEAAENLGVELAGLLLSKGAKHILSVARQLSDAR
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(41110..41283,41496..41582,42738..42791,43020..43139,44035..44073,44591..44704,45400..45475,46100..46177,48455..48510,48613..48665,49320..49392,50914..51081))
location: region:41110-51081:-1
so has part: feature:50914-51081:-1:exon
so has part: feature:49320-49392:-1:exon
so has part: feature:48613-48665:-1:exon
so has part: feature:48455-48510:-1:exon
so has part: feature:46100-46177:-1:exon
so has part: feature:45400-45475:-1:exon
so has part: feature:44591-44704:-1:exon
so has part: feature:44035-44073:-1:exon
so has part: feature:43020-43139:-1:exon
so has part: feature:42738-42791:-1:exon
so has part: feature:41496-41582:-1:exon
so has part: feature:41110-41283:-1:exon

XP_016159427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50914-51081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49320-49392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48613-48665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48455-48510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46100-46177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:45400-45475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44591-44704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44035-44073:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43020-43139:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:42738-42791:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41496-41582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41110-41283:-1:exon

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X1
translation: MAEPASAAVGLGRAESGGGSDGGDAAPVLPQGENGVDGRAIRVDGRAIRVGTRRSQLARIQTDSVVTMLRELYPDLCFEIAVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTCLPPGFTIGAVCKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPHLEFKDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLGPEDCLYAVGQGALAVEVRAKDQEILNMVSALHDADTVLCCIAERAFMKRLEGGCSVPVAVNTLLKDGQLYLTGAVYSLDGSDSLKETMQTGVNYPCLNEDGPNDDVQHVGITAKNVPGQAQEAAENLGVELAGLLLSKGAKHILSVARQLSDAR
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(41110..41283,41496..41582,42738..42791,43020..43139,44035..44073,44591..44704,45400..45475,46100..46177,46502..46579,48455..48510,48613..48665,49320..49392,50914..51081))
location: region:41110-51081:-1
so has part: feature:50914-51081:-1:exon
so has part: feature:49320-49392:-1:exon
so has part: feature:48613-48665:-1:exon
so has part: feature:48455-48510:-1:exon
so has part: feature:46502-46579:-1:exon
so has part: feature:46100-46177:-1:exon
so has part: feature:45400-45475:-1:exon
so has part: feature:44591-44704:-1:exon
so has part: feature:44035-44073:-1:exon
so has part: feature:43020-43139:-1:exon
so has part: feature:42738-42791:-1:exon
so has part: feature:41496-41582:-1:exon
so has part: feature:41110-41283:-1:exon

XP_016159426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:50914-51081:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49320-49392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48613-48665:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48455-48510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46502-46579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46100-46177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45400-45475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44591-44704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44035-44073:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43020-43139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42738-42791:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41496-41582:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41110-41283:-1:exon

VPS11
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51674..63168)
location: region:51674-63168:-1
so has part: feature:51674-63168:-1:exon
subclass of: SO_0000010

101807407
type: Gene
SIO_000068: ncbigene

position:51674:-1
position: 51674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63168:-1
position: 63168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51674-63168:-1:exon

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: VPS11
product: VPS11, CORVET/HOPS core subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005058552.2
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(51674..51950,52676..52898,53013..53184,53753..53955,55251..55390,55854..56015,56874..57062,57532..57675,58088..58274,59252..59403,59674..59875,60275..60522,60622..60785,61793..61928,62109..62253,62971..63168))
location: region:51674-63168:-1
so has part: feature:62971-63168:-1:exon
so has part: feature:62109-62253:-1:exon
so has part: feature:61793-61928:-1:exon
so has part: feature:60622-60785:-1:exon
so has part: feature:60275-60522:-1:exon
so has part: feature:59674-59875:-1:exon
so has part: feature:59252-59403:-1:exon
so has part: feature:58088-58274:-1:exon
so has part: feature:57532-57675:-1:exon
so has part: feature:56874-57062:-1:exon
so has part: feature:55854-56015:-1:exon
so has part: feature:55251-55390:-1:exon
so has part: feature:53753-53955:-1:exon
so has part: feature:53013-53184:-1:exon
so has part: feature:52676-52898:-1:exon
so has part: feature:51674-51950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62971-63168:-1:exon

position:62971:-1
position: 62971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62109-62253:-1:exon

position:62109:-1
position: 62109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62253:-1
position: 62253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61793-61928:-1:exon

position:61793:-1
position: 61793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61928:-1
position: 61928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60622-60785:-1:exon

position:60622:-1
position: 60622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60785:-1
position: 60785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:60275-60522:-1:exon

position:60275:-1
position: 60275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60522:-1
position: 60522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:59674-59875:-1:exon

position:59674:-1
position: 59674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59875:-1
position: 59875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:59252-59403:-1:exon

position:59252:-1
position: 59252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59403:-1
position: 59403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:58088-58274:-1:exon

position:58088:-1
position: 58088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58274:-1
position: 58274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:57532-57675:-1:exon

position:57532:-1
position: 57532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57675:-1
position: 57675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:56874-57062:-1:exon

position:56874:-1
position: 56874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57062:-1
position: 57062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:55854-56015:-1:exon

position:55854:-1
position: 55854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56015:-1
position: 56015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:55251-55390:-1:exon

position:55251:-1
position: 55251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55390:-1
position: 55390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:53753-53955:-1:exon

position:53753:-1
position: 53753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53955:-1
position: 53955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:53013-53184:-1:exon

position:53013:-1
position: 53013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53184:-1
position: 53184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:52676-52898:-1:exon

position:52676:-1
position: 52676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52898:-1
position: 52898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:51674-51950:-1:exon

position:51950:-1
position: 51950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: VPS11
product: VPS11, CORVET/HOPS core subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303903.1
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(51674..51950,52676..52898,53013..53184,53753..53955,55251..55390,55854..56015,56874..57062,57532..57675,58088..58274,59252..59403,59674..59875,60275..60506,61793..61928,62109..62257,62975..63167))
location: region:51674-63167:-1
so has part: feature:62975-63167:-1:exon
so has part: feature:62109-62257:-1:exon
so has part: feature:61793-61928:-1:exon
so has part: feature:60275-60506:-1:exon
so has part: feature:59674-59875:-1:exon
so has part: feature:59252-59403:-1:exon
so has part: feature:58088-58274:-1:exon
so has part: feature:57532-57675:-1:exon
so has part: feature:56874-57062:-1:exon
so has part: feature:55854-56015:-1:exon
so has part: feature:55251-55390:-1:exon
so has part: feature:53753-53955:-1:exon
so has part: feature:53013-53184:-1:exon
so has part: feature:52676-52898:-1:exon
so has part: feature:51674-51950:-1:exon

position:63167:-1
position: 63167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62975-63167:-1:exon

position:62975:-1
position: 62975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62109-62257:-1:exon

position:62257:-1
position: 62257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61793-61928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60275-60506:-1:exon

position:60506:-1
position: 60506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:59674-59875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59252-59403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58088-58274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57532-57675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56874-57062:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55854-56015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55251-55390:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:53753-53955:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53013-53184:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52676-52898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:51674-51950:-1:exon

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: VPS11
product: VPS11, CORVET/HOPS core subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005058553.2
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(51674..51950,52676..52898,53013..53184,53753..53955,55251..55390,55854..56015,56874..57062,57532..57675,58088..58274,59252..59403,59674..59875,60275..60522,60622..60785,61793..61928,62109..62257,62975..63167))
location: region:51674-63167:-1
so has part: feature:62975-63167:-1:exon
so has part: feature:62109-62257:-1:exon
so has part: feature:61793-61928:-1:exon
so has part: feature:60622-60785:-1:exon
so has part: feature:60275-60522:-1:exon
so has part: feature:59674-59875:-1:exon
so has part: feature:59252-59403:-1:exon
so has part: feature:58088-58274:-1:exon
so has part: feature:57532-57675:-1:exon
so has part: feature:56874-57062:-1:exon
so has part: feature:55854-56015:-1:exon
so has part: feature:55251-55390:-1:exon
so has part: feature:53753-53955:-1:exon
so has part: feature:53013-53184:-1:exon
so has part: feature:52676-52898:-1:exon
so has part: feature:51674-51950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62975-63167:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62109-62257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61793-61928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60622-60785:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60275-60522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59674-59875:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59252-59403:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58088-58274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57532-57675:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:56874-57062:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55854-56015:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55251-55390:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53753-53955:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53013-53184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52676-52898:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:51674-51950:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X3
translation: MAAYLQWRRFVFFDRETVREPAGPDGTGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIVKDYPHLELDTHGCGLRCSSISDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFSGNEAQNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKVLRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALRYIGKLPFEQAESNMKRYGKILMHHVPNETTELLKVLCTDYRPSGVNEGPGILEGKKANSEEFIPVFANNSRELKAFLEHMTEVQTDSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEENCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDEQRIQKYREETTRIRLEIEELKASPRIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLITDLPSGKTAATIEGGLQRELLMHTKRST
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(51786..51950,52676..52898,53013..53184,53753..53955,55251..55390,55854..56015,56874..57062,57532..57675,58088..58274,59252..59403,59674..59875,60275..60506,61793..61928,62109..62257,62975..63128))
location: region:51786-63128:-1
so has part: feature:62975-63128:-1:exon
so has part: feature:62109-62257:-1:exon
so has part: feature:61793-61928:-1:exon
so has part: feature:60275-60506:-1:exon
so has part: feature:59674-59875:-1:exon
so has part: feature:59252-59403:-1:exon
so has part: feature:58088-58274:-1:exon
so has part: feature:57532-57675:-1:exon
so has part: feature:56874-57062:-1:exon
so has part: feature:55854-56015:-1:exon
so has part: feature:55251-55390:-1:exon
so has part: feature:53753-53955:-1:exon
so has part: feature:53013-53184:-1:exon
so has part: feature:52676-52898:-1:exon
so has part: feature:51786-51950:-1:exon

XP_016159389.1
type: Protein
SIO_000068: ncbiprotein

position:51786:-1
position: 51786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63128:-1
position: 63128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62975-63128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62109-62257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61793-61928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60275-60506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:59674-59875:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59252-59403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:58088-58274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:57532-57675:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:56874-57062:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:55854-56015:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55251-55390:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:53753-53955:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53013-53184:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:52676-52898:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:51786-51950:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X1
translation: MAAYLQWRRFVFFDRETVREPAGPDGTGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSISDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFSGNEAQNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKVLRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALRYIGKLPFEQAESNMKRYGKILMHHVPNETTELLKVLCTDYRPSGVNEGPGILEGKKANSEEFIPVFANNSRELKAFLEHMTEVQTDSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEENCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDEQRIQKYREETTRIRLEIEELKASPRIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLITDLPSGKTAATIEGGLQRELLMHTKRST
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(51786..51950,52676..52898,53013..53184,53753..53955,55251..55390,55854..56015,56874..57062,57532..57675,58088..58274,59252..59403,59674..59875,60275..60522,60622..60785,61793..61928,62109..62257,62975..63128))
location: region:51786-63128:-1
so has part: feature:62975-63128:-1:exon
so has part: feature:62109-62257:-1:exon
so has part: feature:61793-61928:-1:exon
so has part: feature:60622-60785:-1:exon
so has part: feature:60275-60522:-1:exon
so has part: feature:59674-59875:-1:exon
so has part: feature:59252-59403:-1:exon
so has part: feature:58088-58274:-1:exon
so has part: feature:57532-57675:-1:exon
so has part: feature:56874-57062:-1:exon
so has part: feature:55854-56015:-1:exon
so has part: feature:55251-55390:-1:exon
so has part: feature:53753-53955:-1:exon
so has part: feature:53013-53184:-1:exon
so has part: feature:52676-52898:-1:exon
so has part: feature:51786-51950:-1:exon

XP_005058610.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62975-63128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62109-62257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61793-61928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60622-60785:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60275-60522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59674-59875:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59252-59403:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58088-58274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57532-57675:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:56874-57062:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55854-56015:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55251-55390:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53753-53955:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53013-53184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52676-52898:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:51786-51950:-1:exon

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog isoform X2
translation: MAAYLQWRRFVFFDRETVREPAGPDGTGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSISDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFSGNEAQNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKVLRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALRYIGKLPFEQAESNMKRYGKILMHHVPNETTELLKVLCTDYRPSGVNEGPGILEGKKANSEEFIPVFANNSRELKAFLEHMTEVQTDSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEENCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDEQRIQKYREETTRIRLEIEELKASPRIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLITDLPSGKTAATIEGGLQRELLMHTKRST
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(51786..51950,52676..52898,53013..53184,53753..53955,55251..55390,55854..56015,56874..57062,57532..57675,58088..58274,59252..59403,59674..59875,60275..60522,60622..60785,61793..61928,62109..62253,62971..63128))
location: region:51786-63128:-1
so has part: feature:62971-63128:-1:exon
so has part: feature:62109-62253:-1:exon
so has part: feature:61793-61928:-1:exon
so has part: feature:60622-60785:-1:exon
so has part: feature:60275-60522:-1:exon
so has part: feature:59674-59875:-1:exon
so has part: feature:59252-59403:-1:exon
so has part: feature:58088-58274:-1:exon
so has part: feature:57532-57675:-1:exon
so has part: feature:56874-57062:-1:exon
so has part: feature:55854-56015:-1:exon
so has part: feature:55251-55390:-1:exon
so has part: feature:53753-53955:-1:exon
so has part: feature:53013-53184:-1:exon
so has part: feature:52676-52898:-1:exon
so has part: feature:51786-51950:-1:exon

XP_005058609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:62971-63128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:62109-62253:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61793-61928:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60622-60785:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60275-60522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:59674-59875:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59252-59403:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:58088-58274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:57532-57675:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:56874-57062:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:55854-56015:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:55251-55390:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:53753-53955:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:53013-53184:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:52676-52898:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:51786-51950:-1:exon

DDX6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(66014..85803)
location: region:66014-85803:-1
so has part: feature:66014-85803:-1:exon
subclass of: SO_0000010

101807720
type: Gene
SIO_000068: ncbigene

position:66014:-1
position: 66014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85803:-1
position: 85803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66014-85803:-1:exon

DDX6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DDX6
product: DEAD-box helicase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005058555.2
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(66014..70308,72645..72828,73566..73667,74540..74603,76094..76210,76545..76673,77169..77291,77810..77904,78166..78312,78791..78920,80138..80242,80706..80769,82172..82635,85651..85803))
location: region:66014-85803:-1
so has part: feature:85651-85803:-1:exon
so has part: feature:82172-82635:-1:exon
so has part: feature:80706-80769:-1:exon
so has part: feature:80138-80242:-1:exon
so has part: feature:78791-78920:-1:exon
so has part: feature:78166-78312:-1:exon
so has part: feature:77810-77904:-1:exon
so has part: feature:77169-77291:-1:exon
so has part: feature:76545-76673:-1:exon
so has part: feature:76094-76210:-1:exon
so has part: feature:74540-74603:-1:exon
so has part: feature:73566-73667:-1:exon
so has part: feature:72645-72828:-1:exon
so has part: feature:66014-70308:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85651-85803:-1:exon

position:85651:-1
position: 85651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82172-82635:-1:exon

position:82172:-1
position: 82172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82635:-1
position: 82635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80706-80769:-1:exon

position:80706:-1
position: 80706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80769:-1
position: 80769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80138-80242:-1:exon

position:80138:-1
position: 80138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80242:-1
position: 80242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78791-78920:-1:exon

position:78791:-1
position: 78791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78920:-1
position: 78920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:78166-78312:-1:exon

position:78166:-1
position: 78166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78312:-1
position: 78312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:77810-77904:-1:exon

position:77810:-1
position: 77810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77904:-1
position: 77904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:77169-77291:-1:exon

position:77169:-1
position: 77169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77291:-1
position: 77291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:76545-76673:-1:exon

position:76545:-1
position: 76545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76673:-1
position: 76673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:76094-76210:-1:exon

position:76094:-1
position: 76094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76210:-1
position: 76210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:74540-74603:-1:exon

position:74540:-1
position: 74540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74603:-1
position: 74603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:73566-73667:-1:exon

position:73566:-1
position: 73566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73667:-1
position: 73667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:72645-72828:-1:exon

position:72645:-1
position: 72645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72828:-1
position: 72828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:66014-70308:-1:exon

position:70308:-1
position: 70308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DDX6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DDX6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent RNA helicase DDX6
translation: MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNANTINNGTQQQAQSMTTAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEKQ
SIO_010081: DDX6
subclass of: SO_0000673
so part of: DDX6
location: complement(join(72653..72828,73566..73667,74540..74603,76094..76210,76545..76673,77169..77291,77810..77904,78166..78312,78791..78920,80138..80242,80706..80769,82172..82371))
location: region:72653-82371:-1
so has part: feature:82172-82371:-1:exon
so has part: feature:80706-80769:-1:exon
so has part: feature:80138-80242:-1:exon
so has part: feature:78791-78920:-1:exon
so has part: feature:78166-78312:-1:exon
so has part: feature:77810-77904:-1:exon
so has part: feature:77169-77291:-1:exon
so has part: feature:76545-76673:-1:exon
so has part: feature:76094-76210:-1:exon
so has part: feature:74540-74603:-1:exon
so has part: feature:73566-73667:-1:exon
so has part: feature:72653-72828:-1:exon

XP_005058612.1
type: Protein
SIO_000068: ncbiprotein

position:72653:-1
position: 72653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82371:-1
position: 82371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82172-82371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80706-80769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80138-80242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78791-78920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78166-78312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77810-77904:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77169-77291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76545-76673:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76094-76210:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:74540-74603:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:73566-73667:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:72653-72828:-1:exon

CXCR5
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CXCR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 85735..94748
location: region:85735-94748:1
so has part: feature:85735-94748:1:exon
subclass of: SO_0000010

101808105
type: Gene
SIO_000068: ncbigene

position:85735:1
position: 85735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94748:1
position: 94748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85735-94748:1:exon

CXCR5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CXCR5
product: C-X-C motif chemokine receptor 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005058556.2
SIO_010081: CXCR5
subclass of: SO_0000673
so part of: CXCR5
location: join(85735..85896,86534..86635,87563..87655,92779..94748)
location: region:85735-94748:1
so has part: feature:85735-85896:1:exon
so has part: feature:86534-86635:1:exon
so has part: feature:87563-87655:1:exon
so has part: feature:92779-94748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:85735-85896:1:exon

position:85896:1
position: 85896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86534-86635:1:exon

position:86534:1
position: 86534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86635:1
position: 86635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87563-87655:1:exon

position:87563:1
position: 87563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87655:1
position: 87655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:92779-94748:1:exon

position:92779:1
position: 92779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CXCR5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CXCR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-X-C chemokine receptor type 5
translation: MAASSFLPCALPLPAGGTTPVYAHHARTHARTHASKHIRTTCGVRHASRPTRRAEKECPEADEHKQVHTKVLMAGEDSDILEAAGARQKRTFVEISGGETDPASQAMGPVSYSSETYDLSQVELSGYYEAENATPSLEGYFCFNPASSVVGNQGDPFRKVFMPLIYLLMFVLGTLGNALVLVILERFKRSRTTTENFLFHLTLANLALLLTFPFSVVESLAGWIFGKFLCKILSAVHKINFYCSSMLLGCIAVDRYLAIVYAIHTYRKRRARSIHLTCTAVWFCSLLLTLPDLIFMEVWTDDSNRSICYFPEVGIDGNNAWLATRFLYHTVGFFVPLLVMCYCYMAIIRALCQSQRLQRQKAVRVAILVTGIFLLCWSPYHIVIFLNTLTKLEAFTKNCLLEDQLDTAIMVTEAIGFTHCCLNPILYAFIGVKFRNDFFRILQDLGCISQETLQEILEVTRKGSGIESDNTTSISTF
SIO_010081: CXCR5
subclass of: SO_0000673
so part of: CXCR5
location: join(85735..85896,86534..86635,87563..87655,92779..93855)
location: region:85735-93855:1
so has part: feature:85735-85896:1:exon
so has part: feature:86534-86635:1:exon
so has part: feature:87563-87655:1:exon
so has part: feature:92779-93855:1:exon

XP_005058613.2
type: Protein
SIO_000068: ncbiprotein

position:93855:1
position: 93855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85735-85896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86534-86635:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87563-87655:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92779-93855:1:exon

BCL9L
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(100152..147303)
location: region:100152-147303:-1
so has part: feature:100152-147303:-1:exon
subclass of: SO_0000010

101808294
type: Gene
SIO_000068: ncbigene

position:100152:-1
position: 100152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147303:-1
position: 147303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100152-147303:-1:exon

BCL9L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BCL9L
product: B-cell CLL/lymphoma 9-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016303880.1
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(100152..101699,102951..103211,103636..106033,106457..106541,107313..107517,108643..108765,110435..110798,147264..147303))
location: region:100152-147303:-1
so has part: feature:147264-147303:-1:exon
so has part: feature:110435-110798:-1:exon
so has part: feature:108643-108765:-1:exon
so has part: feature:107313-107517:-1:exon
so has part: feature:106457-106541:-1:exon
so has part: feature:103636-106033:-1:exon
so has part: feature:102951-103211:-1:exon
so has part: feature:100152-101699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147264-147303:-1:exon

position:147264:-1
position: 147264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:110435-110798:-1:exon

position:110435:-1
position: 110435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110798:-1
position: 110798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108643-108765:-1:exon

position:108643:-1
position: 108643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108765:-1
position: 108765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:107313-107517:-1:exon

position:107313:-1
position: 107313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107517:-1
position: 107517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106457-106541:-1:exon

position:106457:-1
position: 106457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106541:-1
position: 106541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:103636-106033:-1:exon

position:103636:-1
position: 103636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106033:-1
position: 106033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:102951-103211:-1:exon

position:102951:-1
position: 102951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103211:-1
position: 103211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:100152-101699:-1:exon

position:101699:-1
position: 101699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCL9L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BCL9L
product: B-cell CLL/lymphoma 9-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005058559.2
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(100152..101699,102960..103211,103636..106033,106457..106541,107313..107565,108643..108765,110435..110798,147264..147303))
location: region:100152-147303:-1
so has part: feature:147264-147303:-1:exon
so has part: feature:110435-110798:-1:exon
so has part: feature:108643-108765:-1:exon
so has part: feature:107313-107565:-1:exon
so has part: feature:106457-106541:-1:exon
so has part: feature:103636-106033:-1:exon
so has part: feature:102960-103211:-1:exon
so has part: feature:100152-101699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147264-147303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110435-110798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108643-108765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107313-107565:-1:exon

position:107565:-1
position: 107565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106457-106541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103636-106033:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102960-103211:-1:exon

position:102960:-1
position: 102960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:100152-101699:-1:exon

BCL9L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BCL9L
product: B-cell CLL/lymphoma 9-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005058558.1
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(100152..101699,102951..103211,103636..106033,106457..106541,107313..107565,108643..108765,110435..110798,147264..147303))
location: region:100152-147303:-1
so has part: feature:147264-147303:-1:exon
so has part: feature:110435-110798:-1:exon
so has part: feature:108643-108765:-1:exon
so has part: feature:107313-107565:-1:exon
so has part: feature:106457-106541:-1:exon
so has part: feature:103636-106033:-1:exon
so has part: feature:102951-103211:-1:exon
so has part: feature:100152-101699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147264-147303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:110435-110798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108643-108765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:107313-107565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:106457-106541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103636-106033:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102951-103211:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100152-101699:-1:exon

BCL9L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 9-like protein isoform X3
translation: MHPDNKLPSHGKAGSSSALAQHHNVNQAPTCNLGSKGVGAGSHGSKATQISPGNSGLKNSQNAVPNFSSLKGKVKRERSISVDSGEQREASTPSQDTESKGEVAPRSKRRCVLERKQPYSGDEWCSGPDSEEDDKPVNSAHSCHVADPAMSAAPQLGPGSNPLPALSDSSAPGVPHGAGPGLRSEAGGGGGGAGKPSQFVYVFTTHLANTAAEAVLQGRADSILAYHQQNVPRAKLDQAPPAPKVLGVAEPLPVNPPAANTPQSQPLAPQASQPQPQPPPPQPPAPPPQAISQTPLPAPNSLPQEGTSEDGRRDLTPNSLGNNSSNNQPGSNHPNTPTASASTMQPGQVDSSATPSSSLLGEGPGPGMPGNGQAGLGPRNTVNSEGLSKEQLEHRERSLQTLRDIERLLLRSGEAEPFLKSSQNVGEGGTAPQPQAAPAQPPVPPASMKKYEEPLQSMISQTQSLGGPGLEHEVPHHPGADMGQQMNMMMQRLNQDSLTPEQVAWRKLQEEYYEEKRRKEEQISIHSRPMQEIMIPQSMGSMMMRGPPPPYHSKPGEQWPPGMGSQLRGPMDVQDPLQLRGGPPFPGPRFPGNQMQRVSGFGGMQNMPLDALGPMNAMQRPVRPGMAWSDDMSPMGGPGNFPQGSLPYPPGQGDPERFMNPRAREEILRHQLMEKRPVAMQRPLGISSNSMSQGMEMERMMQAHRQIDPSMFAGQITGESLSSAPMGMDFAGTRGMLSPPMSQSGLRDMDTPMGPGNLNMNMNVNMNMNMNLNVQMTPQQQMMMSQKMRGPEMITHQGMNPEELARVRAQNGNGSAILTGSQKMMIPSQFPNQGQQGFSSGQGSYPSLPQEMSSGSEMFSPEQGTMPIGSISGTTRLSHIPLPPASNPTPTPVGNLANMHPAPSRGLGRRPSDLTININQMNSPSMGHLKSPTLSQVHSPLVTSPSANLKSPQTPSQMVSMPPSNQSGPLKSPQVMSSSLNVRSPTGSPSRLKSPSMAVSSPGWVPSPKATMPSPGVNQSKQTLNMNSSASIGALDQGSLPSGPRSSSSAPASNTSSTMNPNMPFTSSPDPSPSQNPLSLMMSQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPMLPPGSMSGVTGNQPNQLHLNSVGPGSSQSPMGMNLPGQQPLSHEPPPTSMMSSPNPLGSNIPMHPSGPGAGVPSQNPMMLPPGPQDSLNQQCGPVPNSSQMIPSNQLVFPRMQQPHNAMPSPAGGMPMAPSAGGGPGMQQHYPPGMPLPPEDLPSQQPGQMPPQQHMMGKTIPPRIGDPYPPVLPGVASVLNDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPKNDSQAPKSQPSNLHLMNLQNMMAEQPPVRPGMNAPSLPGQQGVQRGLSMPMCHPGQVPMLGRTGMPPQQGMMGNSMHQGMMSPQQSLMAQQNFMLMQAKQRSMSVSGEMYAQTGHMMSPQGSLMGPPPQQNLMVTHQMRQRSVSLDSQMSYIPGPGNMANLPF
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(100540..101699,102951..103211,103636..106033,106457..106541,107313..107517,108643..108765,110435..110735))
location: region:100540-110735:-1
so has part: feature:110435-110735:-1:exon
so has part: feature:108643-108765:-1:exon
so has part: feature:107313-107517:-1:exon
so has part: feature:106457-106541:-1:exon
so has part: feature:103636-106033:-1:exon
so has part: feature:102951-103211:-1:exon
so has part: feature:100540-101699:-1:exon

XP_016159366.1
type: Protein
SIO_000068: ncbiprotein

position:100540:-1
position: 100540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110735:-1
position: 110735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110435-110735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108643-108765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107313-107517:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106457-106541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103636-106033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102951-103211:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100540-101699:-1:exon

BCL9L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 9-like protein isoform X2
translation: MHPDNKLPSHGKAGSSSALAQHHNVNQAPTCNLGSKGVGAGSHGSKATQISPGNSGLKNSQNAVPNFSSLKGKVKRERSISVDSGEQREASTPSQDTESKGEVAPRSKRRCVLERKQPYSGDEWCSGPDSEEDDKPVNSAHSCHGADPASSSLLCSPGCHVADPAMSAAPQLGPGSNPLPALSDSSAPGVPHGAGPGLRSEAGGGGGGAGKPSQFVYVFTTHLANTAAEAVLQGRADSILAYHQQNVPRAKLDQAPPAPKVLGVAEPLPVNPPAANTPQSQPLAPQASQPQPQPPPPQPPAPPPQAISQTPLPAPNSLPQEGTSEDGRRDLTPNSLGNNSSNNQPGSNHPNTPTASASTMQPGQVDSSATPSSSLLGEGPGPGMPGNGQAGLGPRNTVNSEGLSKEQLEHRERSLQTLRDIERLLLRSGEAEPFLKSSQNVGEGGTAPQPQAAPAQPPVPPASMKKYEEPLQSMISQTQSLGGPGLEHEVPHHPGADMGQQMNMMMQRLNQDSLTPEQVAWRKLQEEYYEEKRRKEEQISIHSRPMQEIMIPQSMGSMMMRGPPPPYHSKPGEQWPPGMGSQLRGPMDVQDPLQLRGGPPFPGPRFPGNQMQRVSGFGGMQNMPLDALGPMNAMQRPVRPGMAWSDDMSPMGGPGNFPQGSLPYPPGQGDPERFMNPRAREEILRHQLMEKRPVAMQRPLGISSNSMSQGMEMERMMQAHRQIDPSMFAGQITGESLSSAPMGMDFAGTRGMLSPPMSQSGLRDMDTPMGPGNLNMNMNVNMNMNMNLNVQMTPQQQMMMSQKMRGPEMITHQGMNPEELARVRAQNGNGSAILTGSQKMMIPSQFPNQGQQGFSSGQGSYPSLPQEMSSGSEMFSPEQGTMPIGSISGTTRLSHIPLPPASNPTPTPVGNLANMHPAPSRGLGRRPSDLTININQMNSPSMGHLKSPTLSQVHSPLVTSPSANLKSPQTPSQMVSMPPSNQSGPLKSPQVMSSSLNVRSPTGSPSRLKSPSMAVSSPGWVPSPKATMPSPGVNQSKQTLNMNSSASIGALDQGSLPSGPRSSSSAPASNTSSTMNPNMPFTSSPDPSPSQNPLSLMMSQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPMLPPGSVTGNQPNQLHLNSVGPGSSQSPMGMNLPGQQPLSHEPPPTSMMSSPNPLGSNIPMHPSGPGAGVPSQNPMMLPPGPQDSLNQQCGPVPNSSQMIPSNQLVFPRMQQPHNAMPSPAGGMPMAPSAGGGPGMQQHYPPGMPLPPEDLPSQQPGQMPPQQHMMGKTIPPRIGDPYPPVLPGVASVLNDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPKNDSQAPKSQPSNLHLMNLQNMMAEQPPVRPGMNAPSLPGQQGVQRGLSMPMCHPGQVPMLGRTGMPPQQGMMGNSMHQGMMSPQQSLMAQQNFMLMQAKQRSMSVSGEMYAQTGHMMSPQGSLMGPPPQQNLMVTHQMRQRSVSLDSQMSYIPGPGNMANLPF
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(100540..101699,102960..103211,103636..106033,106457..106541,107313..107565,108643..108765,110435..110735))
location: region:100540-110735:-1
so has part: feature:110435-110735:-1:exon
so has part: feature:108643-108765:-1:exon
so has part: feature:107313-107565:-1:exon
so has part: feature:106457-106541:-1:exon
so has part: feature:103636-106033:-1:exon
so has part: feature:102960-103211:-1:exon
so has part: feature:100540-101699:-1:exon

XP_005058616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110435-110735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108643-108765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107313-107565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106457-106541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103636-106033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102960-103211:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100540-101699:-1:exon

BCL9L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BCL9L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 9-like protein isoform X1
translation: MHPDNKLPSHGKAGSSSALAQHHNVNQAPTCNLGSKGVGAGSHGSKATQISPGNSGLKNSQNAVPNFSSLKGKVKRERSISVDSGEQREASTPSQDTESKGEVAPRSKRRCVLERKQPYSGDEWCSGPDSEEDDKPVNSAHSCHGADPASSSLLCSPGCHVADPAMSAAPQLGPGSNPLPALSDSSAPGVPHGAGPGLRSEAGGGGGGAGKPSQFVYVFTTHLANTAAEAVLQGRADSILAYHQQNVPRAKLDQAPPAPKVLGVAEPLPVNPPAANTPQSQPLAPQASQPQPQPPPPQPPAPPPQAISQTPLPAPNSLPQEGTSEDGRRDLTPNSLGNNSSNNQPGSNHPNTPTASASTMQPGQVDSSATPSSSLLGEGPGPGMPGNGQAGLGPRNTVNSEGLSKEQLEHRERSLQTLRDIERLLLRSGEAEPFLKSSQNVGEGGTAPQPQAAPAQPPVPPASMKKYEEPLQSMISQTQSLGGPGLEHEVPHHPGADMGQQMNMMMQRLNQDSLTPEQVAWRKLQEEYYEEKRRKEEQISIHSRPMQEIMIPQSMGSMMMRGPPPPYHSKPGEQWPPGMGSQLRGPMDVQDPLQLRGGPPFPGPRFPGNQMQRVSGFGGMQNMPLDALGPMNAMQRPVRPGMAWSDDMSPMGGPGNFPQGSLPYPPGQGDPERFMNPRAREEILRHQLMEKRPVAMQRPLGISSNSMSQGMEMERMMQAHRQIDPSMFAGQITGESLSSAPMGMDFAGTRGMLSPPMSQSGLRDMDTPMGPGNLNMNMNVNMNMNMNLNVQMTPQQQMMMSQKMRGPEMITHQGMNPEELARVRAQNGNGSAILTGSQKMMIPSQFPNQGQQGFSSGQGSYPSLPQEMSSGSEMFSPEQGTMPIGSISGTTRLSHIPLPPASNPTPTPVGNLANMHPAPSRGLGRRPSDLTININQMNSPSMGHLKSPTLSQVHSPLVTSPSANLKSPQTPSQMVSMPPSNQSGPLKSPQVMSSSLNVRSPTGSPSRLKSPSMAVSSPGWVPSPKATMPSPGVNQSKQTLNMNSSASIGALDQGSLPSGPRSSSSAPASNTSSTMNPNMPFTSSPDPSPSQNPLSLMMSQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPMLPPGSMSGVTGNQPNQLHLNSVGPGSSQSPMGMNLPGQQPLSHEPPPTSMMSSPNPLGSNIPMHPSGPGAGVPSQNPMMLPPGPQDSLNQQCGPVPNSSQMIPSNQLVFPRMQQPHNAMPSPAGGMPMAPSAGGGPGMQQHYPPGMPLPPEDLPSQQPGQMPPQQHMMGKTIPPRIGDPYPPVLPGVASVLNDPELSEVIRPTPTGIPEFDLSRIIPSEKPSSTLQYFPKNDSQAPKSQPSNLHLMNLQNMMAEQPPVRPGMNAPSLPGQQGVQRGLSMPMCHPGQVPMLGRTGMPPQQGMMGNSMHQGMMSPQQSLMAQQNFMLMQAKQRSMSVSGEMYAQTGHMMSPQGSLMGPPPQQNLMVTHQMRQRSVSLDSQMSYIPGPGNMANLPF
SIO_010081: BCL9L
subclass of: SO_0000673
so part of: BCL9L
location: complement(join(100540..101699,102951..103211,103636..106033,106457..106541,107313..107565,108643..108765,110435..110735))
location: region:100540-110735:-1
so has part: feature:110435-110735:-1:exon
so has part: feature:108643-108765:-1:exon
so has part: feature:107313-107565:-1:exon
so has part: feature:106457-106541:-1:exon
so has part: feature:103636-106033:-1:exon
so has part: feature:102951-103211:-1:exon
so has part: feature:100540-101699:-1:exon

XP_005058615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:110435-110735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:108643-108765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107313-107565:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106457-106541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103636-106033:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102951-103211:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:100540-101699:-1:exon

CCDC84
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CCDC84
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <166969..168982
location: region:166969-168982:1
so has part: feature:166969-168982:1:exon
subclass of: SO_0000010

101808877
type: Gene
SIO_000068: ncbigene

position:166969:1
position: 166969
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:168982:1
position: 168982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166969-168982:1:exon

CCDC84
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CCDC84
product: coiled-coil domain containing 84
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005058561.2
SIO_010081: CCDC84
subclass of: SO_0000673
so part of: CCDC84
location: join(<166969..167111,167214..167379,167447..167509,167677..167741,167882..167987,168313..168343,168714..168982)
location: region:166969-168982:1
so has part: feature:166969-167111:1:exon
so has part: feature:167214-167379:1:exon
so has part: feature:167447-167509:1:exon
so has part: feature:167677-167741:1:exon
so has part: feature:167882-167987:1:exon
so has part: feature:168313-168343:1:exon
so has part: feature:168714-168982:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:166969-167111:1:exon

position:167111:1
position: 167111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167214-167379:1:exon

position:167214:1
position: 167214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167379:1
position: 167379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167447-167509:1:exon

position:167447:1
position: 167447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167509:1
position: 167509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:167677-167741:1:exon

position:167677:1
position: 167677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167741:1
position: 167741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:167882-167987:1:exon

position:167882:1
position: 167882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167987:1
position: 167987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168313-168343:1:exon

position:168313:1
position: 168313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168343:1
position: 168343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:168714-168982:1:exon

position:168714:1
position: 168714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC84
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CCDC84
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 84
translation: GASAVRRYDPTEHDGRVWCPCCGRGVRRDGRRGGLALLQAGLMQHLAGPEHRRETARFWRENRAEAALRERCLVPAEEYEHFAQALERALAEHQQREEERILQMAADIREAERRQRETVQAALQLQPDPELCAGPSVCRLPAGPERDSPCAAEEPGPSGMQTGPDLARMESGKVLTFIGHQETGGKGNVHTGAKPPWLIEEEDGSQQQIGPSYEEFLKHSEQLTHLLVILALPY
SIO_010081: CCDC84
subclass of: SO_0000673
so part of: CCDC84
location: join(<166969..167111,167214..167379,167447..167509,167677..167741,167882..167987,168313..168343,168714..168844)
location: region:166969-168844:1
so has part: feature:166969-167111:1:exon
so has part: feature:167214-167379:1:exon
so has part: feature:167447-167509:1:exon
so has part: feature:167677-167741:1:exon
so has part: feature:167882-167987:1:exon
so has part: feature:168313-168343:1:exon
so has part: feature:168714-168844:1:exon

XP_005058618.2
type: Protein
SIO_000068: ncbiprotein

position:168844:1
position: 168844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166969-167111:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167214-167379:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167447-167509:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:167677-167741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:167882-167987:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168313-168343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168714-168844:1:exon

LOC107604179
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604179
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 169764..170378
location: region:169764-170378:1
so has part: feature:169764-170378:1:exon
subclass of: SO_0000011

107604179
type: Gene
SIO_000068: ncbigene

position:169764:1
position: 169764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170378:1
position: 170378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169764-170378:1:exon

LOC107604179
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107604179
product: uncharacterized LOC107604179
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_001611989.1
SIO_010081: LOC107604179
subclass of: SO_0000673
so part of: LOC107604179
location: join(169764..169878,170345..170378)
location: region:169764-170378:1
so has part: feature:169764-169878:1:exon
so has part: feature:170345-170378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169764-169878:1:exon

position:169878:1
position: 169878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:170345-170378:1:exon

position:170345:1
position: 170345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS25
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(170950..>172587)
location: region:170950-172587:-1
so has part: feature:170950-172587:-1:exon
subclass of: SO_0000010

101813711
type: Gene
SIO_000068: ncbigene

position:170950:-1
position: 170950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172587:-1
position: 172587
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:170950-172587:-1:exon

RPS25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RPS25
product: ribosomal protein S25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303810.1
SIO_010081: RPS25
subclass of: SO_0000673
so part of: RPS25
location: complement(join(170950..171033,171414..171512,171833..172016,172393..>172587))
location: region:170950-172587:-1
so has part: feature:172393-172587:-1:exon
so has part: feature:171833-172016:-1:exon
so has part: feature:171414-171512:-1:exon
so has part: feature:170950-171033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172393-172587:-1:exon

position:172393:-1
position: 172393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:171833-172016:-1:exon

position:171833:-1
position: 171833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:172016:-1
position: 172016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:171414-171512:-1:exon

position:171414:-1
position: 171414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171512:-1
position: 171512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170950-171033:-1:exon

position:171033:-1
position: 171033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RPS25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S25
translation: WRRRERCEYPFEVPGAAPPRLAAHSPILLILSQPPKDDKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPAAGEDA
SIO_010081: RPS25
subclass of: SO_0000673
so part of: RPS25
location: complement(join(171418..171512,171833..172016,172393..>172587))
location: region:171418-172587:-1
so has part: feature:172393-172587:-1:exon
so has part: feature:171833-172016:-1:exon
so has part: feature:171418-171512:-1:exon

XP_016159296.1
type: Protein
SIO_000068: ncbiprotein

position:171418:-1
position: 171418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172393-172587:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:171833-172016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171418-171512:-1:exon

TRAPPC4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TRAPPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 173164..175609
location: region:173164-175609:1
so has part: feature:173164-175609:1:exon
subclass of: SO_0000010

101809427
type: Gene
SIO_000068: ncbigene

position:173164:1
position: 173164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175609:1
position: 175609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173164-175609:1:exon

TRAPPC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TRAPPC4
product: trafficking protein particle complex 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005058564.1
SIO_010081: TRAPPC4
subclass of: SO_0000673
so part of: TRAPPC4
location: join(173164..173375,173471..173645,173726..173829,173924..174050,174478..175609)
location: region:173164-175609:1
so has part: feature:173164-173375:1:exon
so has part: feature:173471-173645:1:exon
so has part: feature:173726-173829:1:exon
so has part: feature:173924-174050:1:exon
so has part: feature:174478-175609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173164-173375:1:exon

position:173375:1
position: 173375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:173471-173645:1:exon

position:173471:1
position: 173471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173645:1
position: 173645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173726-173829:1:exon

position:173726:1
position: 173726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173829:1
position: 173829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:173924-174050:1:exon

position:173924:1
position: 173924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174050:1
position: 174050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:174478-175609:1:exon

position:174478:1
position: 174478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRAPPC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TRAPPC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trafficking protein particle complex subunit 4
translation: MAIFSVYVVNKAGGLIYQLDHYAPRADTEKTFSFPLDLVLRLHDERVVVAFGQRDGIRVGHAVLAINGAEVNGRFTADGKDVLEFLGNPANYPVSIRFGRHRLSSNEKLMLASMFHSLFAIGSQLSPEVGSSGIEMLETDTFKLHCFQTLTGIKFMVLADPRQTGIDALLRKIYEIYSDFALKNPFYSLEMPIRCELFDQNLKLALEVAEKAGPFGPGS
SIO_010081: TRAPPC4
subclass of: SO_0000673
so part of: TRAPPC4
location: join(173201..173375,173471..173645,173726..173829,173924..174050,174478..174556)
location: region:173201-174556:1
so has part: feature:173201-173375:1:exon
so has part: feature:173471-173645:1:exon
so has part: feature:173726-173829:1:exon
so has part: feature:173924-174050:1:exon
so has part: feature:174478-174556:1:exon

XP_005058621.1
type: Protein
SIO_000068: ncbiprotein

position:173201:1
position: 173201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174556:1
position: 174556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173201-173375:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173471-173645:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173726-173829:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:173924-174050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:174478-174556:1:exon

SLC37A4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SLC37A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(175061..183616)
location: region:175061-183616:-1
so has part: feature:175061-183616:-1:exon
subclass of: SO_0000010

101809078
type: Gene
SIO_000068: ncbigene

position:175061:-1
position: 175061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183616:-1
position: 183616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175061-183616:-1:exon

SLC37A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SLC37A4
product: solute carrier family 37 member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005058562.1
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(175061..176509,176794..176932,179368..179481,180070..180155,180524..180682,181615..181858,183181..183413,183503..183616))
location: region:175061-183616:-1
so has part: feature:183503-183616:-1:exon
so has part: feature:183181-183413:-1:exon
so has part: feature:181615-181858:-1:exon
so has part: feature:180524-180682:-1:exon
so has part: feature:180070-180155:-1:exon
so has part: feature:179368-179481:-1:exon
so has part: feature:176794-176932:-1:exon
so has part: feature:175061-176509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183503-183616:-1:exon

position:183503:-1
position: 183503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183181-183413:-1:exon

position:183181:-1
position: 183181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183413:-1
position: 183413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181615-181858:-1:exon

position:181615:-1
position: 181615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181858:-1
position: 181858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180524-180682:-1:exon

position:180524:-1
position: 180524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180682:-1
position: 180682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180070-180155:-1:exon

position:180070:-1
position: 180070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180155:-1
position: 180155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:179368-179481:-1:exon

position:179368:-1
position: 179368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179481:-1
position: 179481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:176794-176932:-1:exon

position:176794:-1
position: 176794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176932:-1
position: 176932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:175061-176509:-1:exon

position:176509:-1
position: 176509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC37A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SLC37A4
product: solute carrier family 37 member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005058563.1
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(175061..176509,176794..176932,179017..179082,179368..179481,180070..180155,180524..180682,181615..181858,183181..183413,183503..183616))
location: region:175061-183616:-1
so has part: feature:183503-183616:-1:exon
so has part: feature:183181-183413:-1:exon
so has part: feature:181615-181858:-1:exon
so has part: feature:180524-180682:-1:exon
so has part: feature:180070-180155:-1:exon
so has part: feature:179368-179481:-1:exon
so has part: feature:179017-179082:-1:exon
so has part: feature:176794-176932:-1:exon
so has part: feature:175061-176509:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183503-183616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183181-183413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181615-181858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180524-180682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180070-180155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179368-179481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179017-179082:-1:exon

position:179017:-1
position: 179017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179082:-1
position: 179082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:176794-176932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:175061-176509:-1:exon

SLC37A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SLC37A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate translocase isoform X2
translation: MFVGYTLYYFNRKTFSFVMPAVMAEVPMGKDELGLITSSQSAAYAISKFVSGVLSDQMSARWLFSSGLLMVGLVNVVFSWSSTVMAFAGLWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPIVAALVSMNYDWRNTLSFSGFTCVVVSFVCLVLIKNKPSDVGLPNIEQGAKKGKKGSSSDNSTLAELLLSPYLWVLSTGYLVVFGVKTCCTDWGQLFLIQERGQSMLVGSSYMSALEIGGLVGSIAAGYLSDRAVAKVGLSSYGNPRHALLLSMMAGMCVSMFLFRITVTGDSPKLWILTLGAVFGFSSYGPIALFGVIANESAPANLCGTSHAIVALMANVGGFLAGLPFSTIAKHYSWATAFWVAEVTCIVCTVAFFFLRNIRTQMGRIPKKAD
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(176343..176509,176794..176932,179368..179481,180070..180155,180524..180682,181615..181858,183181..183413,183503..183602))
location: region:176343-183602:-1
so has part: feature:183503-183602:-1:exon
so has part: feature:183181-183413:-1:exon
so has part: feature:181615-181858:-1:exon
so has part: feature:180524-180682:-1:exon
so has part: feature:180070-180155:-1:exon
so has part: feature:179368-179481:-1:exon
so has part: feature:176794-176932:-1:exon
so has part: feature:176343-176509:-1:exon

XP_005058619.1
type: Protein
SIO_000068: ncbiprotein

position:176343:-1
position: 176343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183602:-1
position: 183602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183503-183602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183181-183413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181615-181858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180524-180682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180070-180155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179368-179481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:176794-176932:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176343-176509:-1:exon

SLC37A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SLC37A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate translocase isoform X1
translation: MFVGYTLYYFNRKTFSFVMPAVMAEVPMGKDELGLITSSQSAAYAISKFVSGVLSDQMSARWLFSSGLLMVGLVNVVFSWSSTVMAFAGLWFLNGLAQGLGWPPCGKILRKWFEPSQFGTWWAILSTSMNLAGGLGPIVAALVSMNYDWRNTLSFSGFTCVVVSFVCLVLIKNKPSDVGLPNIEQGAKKGKKGSSSDNSTLAELLLSPYLWVLSTGYLVVFGVKTCCTDWGQLFLIQERGQSMLVGSSYMSALEIGGLVGSIAAGYLSDRAVAKVGLSSYGNPRHALLLSMMAGMCVSMFLFRITVTGDSPKGNHFWTVALQPLADLTGLKEHELWILTLGAVFGFSSYGPIALFGVIANESAPANLCGTSHAIVALMANVGGFLAGLPFSTIAKHYSWATAFWVAEVTCIVCTVAFFFLRNIRTQMGRIPKKAD
SIO_010081: SLC37A4
subclass of: SO_0000673
so part of: SLC37A4
location: complement(join(176343..176509,176794..176932,179017..179082,179368..179481,180070..180155,180524..180682,181615..181858,183181..183413,183503..183602))
location: region:176343-183602:-1
so has part: feature:183503-183602:-1:exon
so has part: feature:183181-183413:-1:exon
so has part: feature:181615-181858:-1:exon
so has part: feature:180524-180682:-1:exon
so has part: feature:180070-180155:-1:exon
so has part: feature:179368-179481:-1:exon
so has part: feature:179017-179082:-1:exon
so has part: feature:176794-176932:-1:exon
so has part: feature:176343-176509:-1:exon

XP_005058620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183503-183602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183181-183413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181615-181858:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180524-180682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180070-180155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179368-179481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179017-179082:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:176794-176932:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:176343-176509:-1:exon

HYOU1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HYOU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(184045..197524)
location: region:184045-197524:-1
so has part: feature:184045-197524:-1:exon
subclass of: SO_0000010

101809626
type: Gene
SIO_000068: ncbigene

position:184045:-1
position: 184045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197524:-1
position: 197524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184045-197524:-1:exon

HYOU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HYOU1
product: hypoxia up-regulated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016303896.1
SIO_010081: HYOU1
subclass of: SO_0000673
so part of: HYOU1
location: complement(join(184045..185057,185551..185634,186427..186679,187178..187262,187574..187707,187980..188102,188602..188689,188858..189054,189210..189398,189548..189630,189938..189998,190101..190239,190384..190571,190865..190997,191096..191178,192053..192187,192582..192765,193542..193657,194223..194404,195232..195308,195404..195558,195764..195842,197053..197146,197418..197524))
location: region:184045-197524:-1
so has part: feature:197418-197524:-1:exon
so has part: feature:197053-197146:-1:exon
so has part: feature:195764-195842:-1:exon
so has part: feature:195404-195558:-1:exon
so has part: feature:195232-195308:-1:exon
so has part: feature:194223-194404:-1:exon
so has part: feature:193542-193657:-1:exon
so has part: feature:192582-192765:-1:exon
so has part: feature:192053-192187:-1:exon
so has part: feature:191096-191178:-1:exon
so has part: feature:190865-190997:-1:exon
so has part: feature:190384-190571:-1:exon
so has part: feature:190101-190239:-1:exon
so has part: feature:189938-189998:-1:exon
so has part: feature:189548-189630:-1:exon
so has part: feature:189210-189398:-1:exon
so has part: feature:188858-189054:-1:exon
so has part: feature:188602-188689:-1:exon
so has part: feature:187980-188102:-1:exon
so has part: feature:187574-187707:-1:exon
so has part: feature:187178-187262:-1:exon
so has part: feature:186427-186679:-1:exon
so has part: feature:185551-185634:-1:exon
so has part: feature:184045-185057:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197418-197524:-1:exon

position:197418:-1
position: 197418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197053-197146:-1:exon

position:197053:-1
position: 197053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197146:-1
position: 197146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195764-195842:-1:exon

position:195764:-1
position: 195764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195842:-1
position: 195842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195404-195558:-1:exon

position:195404:-1
position: 195404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195558:-1
position: 195558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195232-195308:-1:exon

position:195232:-1
position: 195232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195308:-1
position: 195308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194223-194404:-1:exon

position:194223:-1
position: 194223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194404:-1
position: 194404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:193542-193657:-1:exon

position:193542:-1
position: 193542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193657:-1
position: 193657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:192582-192765:-1:exon

position:192582:-1
position: 192582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192765:-1
position: 192765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:192053-192187:-1:exon

position:192053:-1
position: 192053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192187:-1
position: 192187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:191096-191178:-1:exon

position:191096:-1
position: 191096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191178:-1
position: 191178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:190865-190997:-1:exon

position:190865:-1
position: 190865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190997:-1
position: 190997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:190384-190571:-1:exon

position:190384:-1
position: 190384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190571:-1
position: 190571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:190101-190239:-1:exon

position:190101:-1
position: 190101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190239:-1
position: 190239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:189938-189998:-1:exon

position:189938:-1
position: 189938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189998:-1
position: 189998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:189548-189630:-1:exon

position:189548:-1
position: 189548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189630:-1
position: 189630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:189210-189398:-1:exon

position:189210:-1
position: 189210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189398:-1
position: 189398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:188858-189054:-1:exon

position:188858:-1
position: 188858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189054:-1
position: 189054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:188602-188689:-1:exon

position:188602:-1
position: 188602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188689:-1
position: 188689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:187980-188102:-1:exon

position:187980:-1
position: 187980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188102:-1
position: 188102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:187574-187707:-1:exon

position:187574:-1
position: 187574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187707:-1
position: 187707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:187178-187262:-1:exon

position:187178:-1
position: 187178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187262:-1
position: 187262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:186427-186679:-1:exon

position:186427:-1
position: 186427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186679:-1
position: 186679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:185551-185634:-1:exon

position:185551:-1
position: 185551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185634:-1
position: 185634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:184045-185057:-1:exon

position:185057:-1
position: 185057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HYOU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HYOU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypoxia up-regulated protein 1
translation: MARLGGWALPLLLLSCFLPAADPVAVMSVDVGSESMKIAIVKPGVPMEIVLNKESRRKTPVAVSLKENERLFGDSALGMSIRTPKVAFRYFQDLLGKRIDNPHVALYQSRFPEHELVKDETRQTVIFKLSPTIQYSPEEMLGMVLNYSRGLAEEFAEQPIKDAVITVPAYFNQAERRAVLHAARMADLKVLQLINDNTAVALNYGVFRRKDINATAQNIMFYDMGAGSTVCTIVTYQTMKTKDSGTQPQLQIQGIGFDRTLGGLEMELRLRDYLAKRFNEQHPSKDVRKNPRAMAKLLKEANRLKTVLSANADHMAQIEGLLDDIDFKAKVSRQEFEDLCSDLFKRVPGPVQQALSSAAMNMDGIDQVILVGGATRVPKVQEVLLKAVGKEELGKNINADEAAAMGAVYQAAALSKAFKVKPFIVRDAAVFPIQVEFTREVEEDDKSRSLKHNKRILFQRMAPYPQRKVITFNRYTDDFEFYVNYGDLTFLSQGDLRVFGSLNLTTVRLKGVGDSFKKHSDYESKGIKAHFNMDESGVLSLDRVESVFETLVEDKLEEESTLTKLGNTISSLFGGGGPTPETGENLTDSVQEEEESLAETGKEEQGEKQDQKSHTVDAGEEQGQEKQQSSDQAETASPKVESQRKEEDEKLEPQSPKENRETAKEEEPSKSSSDSAATKTEEEKIKAPKKQKLVHEITMELDVNDVPDLEEDELKSSMKRLQDLTIRDLEKQEREKSANSLESFIFETQDKLYQEEYQFVSTEEQREEISKKLSEASSWMEEEGYAAATKELKDKLSELKKLCRNLFFRVEERRKWPERLAALESLLNHSTIFLRGARMIPESDQIFTEVELSTLEKAINETTIWKNETLAEQNKLTPAEKPVLLSKDIEFKIAALDREVQYLLNKAKFAKPKPKREKNATKTDSGKNTTAAPETENTIPPTEGKQEDKLEDIDPAKEPPTAEKAAVDDKPGSDSGSKKEKAEAGGEGRKNDEL
SIO_010081: HYOU1
subclass of: SO_0000673
so part of: HYOU1
location: complement(join(184999..185057,185551..185634,186427..186679,187178..187262,187574..187707,187980..188102,188602..188689,188858..189054,189210..189398,189548..189630,189938..189998,190101..190239,190384..190571,190865..190997,191096..191178,192053..192187,192582..192765,193542..193657,194223..194404,195232..195308,195404..195558,195764..195842,197053..197146,197418..197481))
location: region:184999-197481:-1
so has part: feature:197418-197481:-1:exon
so has part: feature:197053-197146:-1:exon
so has part: feature:195764-195842:-1:exon
so has part: feature:195404-195558:-1:exon
so has part: feature:195232-195308:-1:exon
so has part: feature:194223-194404:-1:exon
so has part: feature:193542-193657:-1:exon
so has part: feature:192582-192765:-1:exon
so has part: feature:192053-192187:-1:exon
so has part: feature:191096-191178:-1:exon
so has part: feature:190865-190997:-1:exon
so has part: feature:190384-190571:-1:exon
so has part: feature:190101-190239:-1:exon
so has part: feature:189938-189998:-1:exon
so has part: feature:189548-189630:-1:exon
so has part: feature:189210-189398:-1:exon
so has part: feature:188858-189054:-1:exon
so has part: feature:188602-188689:-1:exon
so has part: feature:187980-188102:-1:exon
so has part: feature:187574-187707:-1:exon
so has part: feature:187178-187262:-1:exon
so has part: feature:186427-186679:-1:exon
so has part: feature:185551-185634:-1:exon
so has part: feature:184999-185057:-1:exon

XP_016159382.1
type: Protein
SIO_000068: ncbiprotein

position:184999:-1
position: 184999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197481:-1
position: 197481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197418-197481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197053-197146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195764-195842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195404-195558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195232-195308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194223-194404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193542-193657:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:192582-192765:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192053-192187:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:191096-191178:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190865-190997:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190384-190571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:190101-190239:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:189938-189998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:189548-189630:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:189210-189398:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:188858-189054:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:188602-188689:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:187980-188102:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:187574-187707:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:187178-187262:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:186427-186679:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:185551-185634:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:184999-185057:-1:exon

PHLDB1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(199917..218331)
location: region:199917-218331:-1
so has part: feature:199917-218331:-1:exon
subclass of: SO_0000010

101809824
type: Gene
SIO_000068: ncbigene

position:199917:-1
position: 199917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218331:-1
position: 218331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199917-218331:-1:exon

PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005058566.2
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(199917..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202404..202448,202656..202749,202853..202969,203271..203438,203902..204048,204532..204669,205409..205531,206030..206119,206278..206388,206501..206656,207880..208008,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..218331))
location: region:199917-218331:-1
so has part: feature:217899-218331:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:207880-208008:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:205409-205531:-1:exon
so has part: feature:204532-204669:-1:exon
so has part: feature:203902-204048:-1:exon
so has part: feature:203271-203438:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:202404-202448:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:199917-200537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217899-218331:-1:exon

position:217899:-1
position: 217899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

position:216605:-1
position: 216605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216703:-1
position: 216703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

position:216136:-1
position: 216136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216259:-1
position: 216259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

position:215897:-1
position: 215897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216067:-1
position: 216067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

position:213696:-1
position: 213696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213821:-1
position: 213821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

position:211276:-1
position: 211276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212360:-1
position: 212360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

position:210302:-1
position: 210302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210544:-1
position: 210544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

position:210091:-1
position: 210091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210228:-1
position: 210228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

position:209828:-1
position: 209828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209965:-1
position: 209965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:207880-208008:-1:exon

position:207880:-1
position: 207880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208008:-1
position: 208008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:206501-206656:-1:exon

position:206501:-1
position: 206501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206656:-1
position: 206656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:206278-206388:-1:exon

position:206278:-1
position: 206278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206388:-1
position: 206388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:206030-206119:-1:exon

position:206030:-1
position: 206030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206119:-1
position: 206119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:205409-205531:-1:exon

position:205409:-1
position: 205409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205531:-1
position: 205531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:204532-204669:-1:exon

position:204532:-1
position: 204532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204669:-1
position: 204669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:203902-204048:-1:exon

position:203902:-1
position: 203902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204048:-1
position: 204048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:203271-203438:-1:exon

position:203271:-1
position: 203271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203438:-1
position: 203438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:202853-202969:-1:exon

position:202853:-1
position: 202853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202969:-1
position: 202969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:202656-202749:-1:exon

position:202656:-1
position: 202656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202749:-1
position: 202749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:202404-202448:-1:exon

position:202404:-1
position: 202404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202448:-1
position: 202448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:201741-202032:-1:exon

position:201741:-1
position: 201741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202032:-1
position: 202032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:201545-201635:-1:exon

position:201545:-1
position: 201545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201635:-1
position: 201635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:201318-201464:-1:exon

position:201318:-1
position: 201318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201464:-1
position: 201464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:200958-201177:-1:exon

position:200958:-1
position: 200958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201177:-1
position: 201177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:200796-200881:-1:exon

position:200796:-1
position: 200796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200881:-1
position: 200881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:199917-200537:-1:exon

position:200537:-1
position: 200537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016303929.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(199917..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202404..202448,202656..202749,202853..202969,205409..205531,206030..206119,206278..206388,206501..206656,207880..208008,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..218324))
location: region:199917-218324:-1
so has part: feature:217899-218324:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:207880-208008:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:205409-205531:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:202404-202448:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:199917-200537:-1:exon

position:218324:-1
position: 218324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217899-218324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207880-208008:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206501-206656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206278-206388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:206030-206119:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205409-205531:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202853-202969:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:202656-202749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:202404-202448:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201741-202032:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201545-201635:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:201318-201464:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:200958-201177:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:200796-200881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:199917-200537:-1:exon

PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016303930.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(199917..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202404..202448,202656..202749,202853..202969,206030..206119,206278..206388,206501..206656,207880..208008,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..218321))
location: region:199917-218321:-1
so has part: feature:217899-218321:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:207880-208008:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:202404-202448:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:199917-200537:-1:exon

position:218321:-1
position: 218321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217899-218321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207880-208008:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206501-206656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206278-206388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:206030-206119:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:202853-202969:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202656-202749:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:202404-202448:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201741-202032:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201545-201635:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201318-201464:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200958-201177:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:200796-200881:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199917-200537:-1:exon

PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_016303931.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(199917..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202404..202448,202656..202749,202853..202969,206030..206119,206278..206388,206501..206656,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..218318))
location: region:199917-218318:-1
so has part: feature:217899-218318:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:202404-202448:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:199917-200537:-1:exon

position:218318:-1
position: 218318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217899-218318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206501-206656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206278-206388:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206030-206119:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202853-202969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:202656-202749:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202404-202448:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201741-202032:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201545-201635:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201318-201464:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:200958-201177:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200796-200881:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:199917-200537:-1:exon

PHLDB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHLDB1
product: pleckstrin homology like domain family B member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016303932.1
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(199917..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202656..202749,202853..202969,206030..206119,206278..206388,206501..206656,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..218317))
location: region:199917-218317:-1
so has part: feature:217899-218317:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:199917-200537:-1:exon

position:218317:-1
position: 218317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217899-218317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206501-206656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206278-206388:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206030-206119:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202853-202969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:202656-202749:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:201741-202032:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201545-201635:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201318-201464:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:200958-201177:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:200796-200881:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:199917-200537:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X5
translation: MLGSAAPQCLGNMGTLRRVPLGTRTRWQPMSSTIRHLQEGTMEASGRTPTSPTHRVQTVIQSSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAITLLPLEEGRTTIGTAATDIVLQGPGLAPQHCYIENVRGTLTLHPCGNACTIDGVPLQRPMHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGSRSPSALYGLPGKSEALVNGGRQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQKPPACGRSPLSPVLNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSHSLSSQEQGPAVPPPLPLRSSSYNHTVQPPTLPAGGSSEPWPADRLRDHRVGSPRLAPRSVPRPRVALQERPPSPFREPRDPLAPGRHPGSRAVPEALLQPPESPRVARRNMESMRELPPLSPSLSRRAASPRVTPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPALAENPTPRPSFGTCLSPAYGLGSPAVPSPRQSPRSPRKPLGDPRLPAGPRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGMEPGDVHRLLAGDTDAGKWVPRGAMALDHSVEELQQRESLERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERTSVLGHLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVLRLRQEEEAVQQLQEKLSSLDASIRKERDKEAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLMSLERRYQLVTGGRSFPKMSSALRELYRAKTEGGAGVLSPRMKSGTPSSSQLNLSVLERSPSPKGPPSPAGSLSRNLVATLQDIETKRQLALQQKGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHHRPHGAGPRAEELDHAYDTLSLESSDSMETSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETVRRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPPLTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(200397..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202656..202749,202853..202969,206030..206119,206278..206388,206501..206656,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..217982))
location: region:200397-217982:-1
so has part: feature:217899-217982:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:200397-200537:-1:exon

XP_016159418.1
type: Protein
SIO_000068: ncbiprotein

position:200397:-1
position: 200397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217982:-1
position: 217982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217899-217982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206501-206656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206278-206388:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206030-206119:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202853-202969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:202656-202749:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:201741-202032:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201545-201635:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201318-201464:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:200958-201177:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:200796-200881:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200397-200537:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X4
translation: MLGSAAPQCLGNMGTLRRVPLGTRTRWQPMSSTIRHLQEGTMEASGRTPTSPTHRVQTVIQSSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAITLLPLEEGRTTIGTAATDIVLQGPGLAPQHCYIENVRGTLTLHPCGNACTIDGVPLQRPMHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGSRSPSALYGLPGKSEALVNGGRQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQKPPACGRSPLSPVLNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSHSLSSQEQGPAVPPPLPLRSSSYNHTVQPPTLPAGGSSEPWPADRLRDHRVGSPRLAPRSVPRPRVALQERPPSPFREPRDPLAPGRHPGSRAVPEALLQPPESPRVARRNMESMRELPPLSPSLSRRAASPRVTPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPALAENPTPRPSFGTCLSPAYGLGSPAVPSPRQSPRSPRKPLGDPRLPAGPRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGMEPGDVHRLLAGDTDAGKWVPRGAMALDHSVEELQQRESLERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERTSVLGHLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVLRLRQEEEAVQQLQEKLSSLDASIRKERDKEAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLMSLERRYQLVTGGRSFPKMSSALRELYRAKTEGGAGVLSPRMKSGTPSSSQLNLSVLERSPSPKGPPSPAGSLSRNLVATLQDIETKRQLALQQKAKLLPAEPLQPGNLSGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHHRPHGAGPRAEELDHAYDTLSLESSDSMETSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETVRRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPPLTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(200397..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202404..202448,202656..202749,202853..202969,206030..206119,206278..206388,206501..206656,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..217982))
location: region:200397-217982:-1
so has part: feature:217899-217982:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:202404-202448:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:200397-200537:-1:exon

XP_016159417.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217899-217982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206501-206656:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206278-206388:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206030-206119:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202853-202969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:202656-202749:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202404-202448:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201741-202032:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201545-201635:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201318-201464:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:200958-201177:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200796-200881:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:200397-200537:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X3
translation: MLGSAAPQCLGNMGTLRRVPLGTRTRWQPMSSTIRHLQEGTMEASGRTPTSPTHRVQTVIQSSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAITLLPLEEGRTTIGTAATDIVLQGPGLAPQHCYIENVRGTLTLHPCGNACTIDGVPLQRPMHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGSRSPSALYGLPGKSEALVNGGRQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQKPPACGRSPLSPVLNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSHSLSSQEQGPAVPPPLPLRSSSYNHTVQPPTLPAGGSSEPWPADRLRDHRVGSPRLAPRSVPRPRVALQERPPSPFREPRDPLAPGRHPGSRAVPEALLQPPESPRVARRNMESMRELPPLSPSLSRRAASPRVTPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPALAENPTPRPSFGTCLSPAYGLGSPAVPSPRQSPRSPRKPLGDPRLPAGPRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGMEPGDVHRLLAGDTDAGKWVPRGAMALDHSVEELQQRESLERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERTSVLGHLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVLRLRQEEEAVQQLQEKLSSLDASIRKERDKERAKVDAERKELEQLQALYHESKSHLDKCPESMREQLQEQMRREAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLMSLERRYQLVTGGRSFPKMSSALRELYRAKTEGGAGVLSPRMKSGTPSSSQLNLSVLERSPSPKGPPSPAGSLSRNLVATLQDIETKRQLALQQKAKLLPAEPLQPGNLSGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHHRPHGAGPRAEELDHAYDTLSLESSDSMETSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETVRRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPPLTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(200397..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202404..202448,202656..202749,202853..202969,206030..206119,206278..206388,206501..206656,207880..208008,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..217982))
location: region:200397-217982:-1
so has part: feature:217899-217982:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:207880-208008:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:202404-202448:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:200397-200537:-1:exon

XP_016159416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217899-217982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207880-208008:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206501-206656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206278-206388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:206030-206119:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:202853-202969:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202656-202749:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:202404-202448:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:201741-202032:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201545-201635:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201318-201464:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:200958-201177:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:200796-200881:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:200397-200537:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X2
translation: MLGSAAPQCLGNMGTLRRVPLGTRTRWQPMSSTIRHLQEGTMEASGRTPTSPTHRVQTVIQSSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAITLLPLEEGRTTIGTAATDIVLQGPGLAPQHCYIENVRGTLTLHPCGNACTIDGVPLQRPMHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGSRSPSALYGLPGKSEALVNGGRQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQKPPACGRSPLSPVLNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSHSLSSQEQGPAVPPPLPLRSSSYNHTVQPPTLPAGGSSEPWPADRLRDHRVGSPRLAPRSVPRPRVALQERPPSPFREPRDPLAPGRHPGSRAVPEALLQPPESPRVARRNMESMRELPPLSPSLSRRAASPRVTPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPALAENPTPRPSFGTCLSPAYGLGSPAVPSPRQSPRSPRKPLGDPRLPAGPRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGMEPGDVHRLLAGDTDAGKWVPRGAMALDHSVEELQQRESLERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERTSVLGHLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVLRLRQEEEAVQQLQEKLSSLDASIRKERDKERAKVDAERKELEQLQALYHESKSHLDKCPESMREQLQEQMRREAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLMSLERRYQLVTGGRSFPKMSSALREETLHISEPYELLEGTKPLSPLPAAAASLASPATYSYPKAQELYRAKTEGGAGVLSPRMKSGTPSSSQLNLSVLERSPSPKGPPSPAGSLSRNLVATLQDIETKRQLALQQKAKLLPAEPLQPGNLSGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHHRPHGAGPRAEELDHAYDTLSLESSDSMETSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETVRRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPPLTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(200397..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202404..202448,202656..202749,202853..202969,205409..205531,206030..206119,206278..206388,206501..206656,207880..208008,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..217982))
location: region:200397-217982:-1
so has part: feature:217899-217982:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:207880-208008:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:205409-205531:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:202404-202448:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:200397-200537:-1:exon

XP_016159415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217899-217982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207880-208008:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206501-206656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206278-206388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:206030-206119:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205409-205531:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:202853-202969:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:202656-202749:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:202404-202448:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:201741-202032:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:201545-201635:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:201318-201464:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:200958-201177:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:200796-200881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:200397-200537:-1:exon

PHLDB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHLDB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology-like domain family B member 1 isoform X1
translation: MLGSAAPQCLGNMGTLRRVPLGTRTRWQPMSSTIRHLQEGTMEASGRTPTSPTHRVQTVIQSSPLDLIDTGKGLKVQTEKPHLVSLGSGRLSTAITLLPLEEGRTTIGTAATDIVLQGPGLAPQHCYIENVRGTLTLHPCGNACTIDGVPLQRPMHLTQGCTICLGQATFLRFNHPAEAKWIKSMIPAGSRSPSALYGLPGKSEALVNGGRQLSERGCHSHSSLVSSIEKDLQDIMDSLVLEESASPGIQKPPACGRSPLSPVLNGGGRCLLSPPPSPGAASGGSSYENFSPLSSPASSSSYTSHSLSSQEQGPAVPPPLPLRSSSYNHTVQPPTLPAGGSSEPWPADRLRDHRVGSPRLAPRSVPRPRVALQERPPSPFREPRDPLAPGRHPGSRAVPEALLQPPESPRVARRNMESMRELPPLSPSLSRRAASPRVTPDTPSPQPRLGREVPGSPRARRKGPEESKGAGGPSPPALAENPTPRPSFGTCLSPAYGLGSPAVPSPRQSPRSPRKPLGDPRLPAGPRERKNSITEISDNEDELLEYHRRQRQERVREQEMERLERQRLETILNLCAEYTKTDGMEPGDVHRLLAGDTDAGKWVPRGAMALDHSVEELQQRESLERSDEENLKEECSSTESTHHEHEKLTGPRAKEAQRLEEERTSVLGHLDQLKGRVKELEQQLQETSREAEMERALLQGERESEVLRLRQEEEAVQQLQEKLSSLDASIRKERDKERAKVDAERKELEQLQALYHESKSHLDKCPESMREQLQEQMRREAEALETEAKLFEDLEFQQLERESHLEEEREARGQQLLQSRAECHRSIARRKERVAALDAQAAQIRLQSAQEAERLARERSSVLQLLQKEKEKLMSLERRYQLVTGGRSFPKMSSALREETLHISEPYELLEGTKPLSPLPAAAASLASPATYSYPKAQEEYMRLSDVFRFCSNAHGPSLDAKASAAAPAAAQRSFLLAVAPTADEYVTIEQLSGILGSLHTPAASLLGCTTLAPSSSGCAPPLPSLPSPFISVEMEQQLLGGPVCLPALDLEKWYQEVMAGFEISSSSVSPPSSPPPLPAKAHSSHKALQLYRAKTEGGAGVLSPRMKSGTPSSSQLNLSVLERSPSPKGPPSPAGSLSRNLVATLQDIETKRQLALQQKAKLLPAEPLQPGNLSGRQVIEEQKRRLAELKQKAAAEAQSQWEALHGQPPFPTAFPRLVHHSILHHHRPHGAGPRAEELDHAYDTLSLESSDSMETSISIGNNSACSPDNISSASGMETGKIEEMEKMLKEAHEEKSRLMESREREMELRQQALEDERWRREQLERRLQDETVRRQKLVEKEVKLREKHFSQARPLTRYLPIRKEDFNLRLHIESSGHNVDTCYHIILTEKMCKGYLVKMGGKIKSWKKRWFVFDRMKRTLSYYVDKHETKLKGVIYFQAIEEVYYDHLRSAAKSPNPPLTFCVKTHDRLYYMVAPSAEAMRIWMDVIVTGAEGYTQFMN
SIO_010081: PHLDB1
subclass of: SO_0000673
so part of: PHLDB1
location: complement(join(200397..200537,200796..200881,200958..201177,201318..201464,201545..201635,201741..202032,202404..202448,202656..202749,202853..202969,203271..203438,203902..204048,204532..204669,205409..205531,206030..206119,206278..206388,206501..206656,207880..208008,209828..209965,210091..210228,210302..210544,211276..212360,213696..213821,215897..216067,216136..216259,216605..216703,217899..217982))
location: region:200397-217982:-1
so has part: feature:217899-217982:-1:exon
so has part: feature:216605-216703:-1:exon
so has part: feature:216136-216259:-1:exon
so has part: feature:215897-216067:-1:exon
so has part: feature:213696-213821:-1:exon
so has part: feature:211276-212360:-1:exon
so has part: feature:210302-210544:-1:exon
so has part: feature:210091-210228:-1:exon
so has part: feature:209828-209965:-1:exon
so has part: feature:207880-208008:-1:exon
so has part: feature:206501-206656:-1:exon
so has part: feature:206278-206388:-1:exon
so has part: feature:206030-206119:-1:exon
so has part: feature:205409-205531:-1:exon
so has part: feature:204532-204669:-1:exon
so has part: feature:203902-204048:-1:exon
so has part: feature:203271-203438:-1:exon
so has part: feature:202853-202969:-1:exon
so has part: feature:202656-202749:-1:exon
so has part: feature:202404-202448:-1:exon
so has part: feature:201741-202032:-1:exon
so has part: feature:201545-201635:-1:exon
so has part: feature:201318-201464:-1:exon
so has part: feature:200958-201177:-1:exon
so has part: feature:200796-200881:-1:exon
so has part: feature:200397-200537:-1:exon

XP_005058623.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:217899-217982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:216605-216703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:216136-216259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215897-216067:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213696-213821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211276-212360:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:210302-210544:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210091-210228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:209828-209965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:207880-208008:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206501-206656:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:206278-206388:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:206030-206119:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:205409-205531:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:204532-204669:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:203902-204048:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203271-203438:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:202853-202969:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:202656-202749:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:202404-202448:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:201741-202032:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:201545-201635:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:201318-201464:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:200958-201177:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:200796-200881:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:200397-200537:-1:exon

ARCN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ARCN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(221177..234643)
location: region:221177-234643:-1
so has part: feature:221177-234643:-1:exon
subclass of: SO_0000010

101810898
type: Gene
SIO_000068: ncbigene

position:221177:-1
position: 221177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234643:-1
position: 234643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:221177-234643:-1:exon

ARCN1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: ARCN1
product: archain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_219320.2
SIO_010081: ARCN1
so part of: ARCN1
location: complement(join(221177..221283,222240..223680,224220..224424,224572..224680,224986..225133,226363..226528,227132..227293,227704..227906,228149..228328,228877..229140,234626..234643))
location: region:221177-234643:-1
so has part: feature:234626-234643:-1:exon
so has part: feature:228877-229140:-1:exon
so has part: feature:228149-228328:-1:exon
so has part: feature:227704-227906:-1:exon
so has part: feature:227132-227293:-1:exon
so has part: feature:226363-226528:-1:exon
so has part: feature:224986-225133:-1:exon
so has part: feature:224572-224680:-1:exon
so has part: feature:224220-224424:-1:exon
so has part: feature:222240-223680:-1:exon
so has part: feature:221177-221283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:234626-234643:-1:exon

position:234626:-1
position: 234626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228877-229140:-1:exon

position:228877:-1
position: 228877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229140:-1
position: 229140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:228149-228328:-1:exon

position:228149:-1
position: 228149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228328:-1
position: 228328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:227704-227906:-1:exon

position:227704:-1
position: 227704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227906:-1
position: 227906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:227132-227293:-1:exon

position:227132:-1
position: 227132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227293:-1
position: 227293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:226363-226528:-1:exon

position:226363:-1
position: 226363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226528:-1
position: 226528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:224986-225133:-1:exon

position:224986:-1
position: 224986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225133:-1
position: 225133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:224572-224680:-1:exon

position:224572:-1
position: 224572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224680:-1
position: 224680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:224220-224424:-1:exon

position:224220:-1
position: 224220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224424:-1
position: 224424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:222240-223680:-1:exon

position:222240:-1
position: 222240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223680:-1
position: 223680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:221177-221283:-1:exon

position:221283:-1
position: 221283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARCN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARCN1
product: archain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005058574.2
SIO_010081: ARCN1
subclass of: SO_0000673
so part of: ARCN1
location: complement(join(222133..223680,224220..224424,224572..224680,224986..225133,226363..226528,227132..227293,227704..227906,228149..228328,228877..229140,234626..234643))
location: region:222133-234643:-1
so has part: feature:234626-234643:-1:exon
so has part: feature:228877-229140:-1:exon
so has part: feature:228149-228328:-1:exon
so has part: feature:227704-227906:-1:exon
so has part: feature:227132-227293:-1:exon
so has part: feature:226363-226528:-1:exon
so has part: feature:224986-225133:-1:exon
so has part: feature:224572-224680:-1:exon
so has part: feature:224220-224424:-1:exon
so has part: feature:222133-223680:-1:exon

position:222133:-1
position: 222133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234626-234643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228877-229140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228149-228328:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227704-227906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227132-227293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226363-226528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:224986-225133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224572-224680:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224220-224424:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:222133-223680:-1:exon

ARCN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARCN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coatomer subunit delta
translation: MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERHGKKAPGFGGFGSSAVSGGVTAMITETIIETEKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKLEGENIMTSVGKRSVEAAKVLAPPINMESVHMKIEEKISLTCGRDGGLQNMELHGMIMLHISDEKFARIRLHVENEDKRGVQLQTHPNVDKKLFTTESQIGLKNPEKSFPINSDVGVLKWRLQTTEESFIPLTINCWPSESGNNCDINIEYELQEESLELNDVIITIPLPSGVGAPVIGEIDGEYRHDSRRNLLEWCLPVIDAKNKSGSLEFSIAGQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPVRFSTETTFLVDKYEIL
SIO_010081: ARCN1
subclass of: SO_0000673
so part of: ARCN1
location: complement(join(223591..223680,224220..224424,224572..224680,224986..225133,226363..226528,227132..227293,227704..227906,228149..228328,228877..229140,234626..234628))
location: region:223591-234628:-1
so has part: feature:234626-234628:-1:exon
so has part: feature:228877-229140:-1:exon
so has part: feature:228149-228328:-1:exon
so has part: feature:227704-227906:-1:exon
so has part: feature:227132-227293:-1:exon
so has part: feature:226363-226528:-1:exon
so has part: feature:224986-225133:-1:exon
so has part: feature:224572-224680:-1:exon
so has part: feature:224220-224424:-1:exon
so has part: feature:223591-223680:-1:exon

XP_005058631.1
type: Protein
SIO_000068: ncbiprotein

position:223591:-1
position: 223591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234628:-1
position: 234628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234626-234628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228877-229140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228149-228328:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227704-227906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:227132-227293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226363-226528:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:224986-225133:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224572-224680:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224220-224424:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223591-223680:-1:exon

IFT46
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: IFT46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <231176..234631
location: region:231176-234631:1
so has part: feature:231176-234631:1:exon
subclass of: SO_0000010

107604163
type: Gene
SIO_000068: ncbigene

position:231176:1
position: 231176
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:234631:1
position: 234631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231176-234631:1:exon

IFT46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IFT46
product: intraflagellar transport 46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_016303808.1
SIO_010081: IFT46
subclass of: SO_0000673
so part of: IFT46
location: join(<231176..231384,232017..232091,232190..232283,232609..232737,233115..233236,233307..233373,233589..233649,233931..234016,234370..234631)
location: region:231176-234631:1
so has part: feature:231176-231384:1:exon
so has part: feature:232017-232091:1:exon
so has part: feature:232190-232283:1:exon
so has part: feature:232609-232737:1:exon
so has part: feature:233115-233236:1:exon
so has part: feature:233307-233373:1:exon
so has part: feature:233589-233649:1:exon
so has part: feature:233931-234016:1:exon
so has part: feature:234370-234631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231176-231384:1:exon

position:231384:1
position: 231384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232017-232091:1:exon

position:232017:1
position: 232017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232091:1
position: 232091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:232190-232283:1:exon

position:232190:1
position: 232190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232283:1
position: 232283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:232609-232737:1:exon

position:232609:1
position: 232609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232737:1
position: 232737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:233115-233236:1:exon

position:233115:1
position: 233115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233236:1
position: 233236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:233307-233373:1:exon

position:233307:1
position: 233307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233373:1
position: 233373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:233589-233649:1:exon

position:233589:1
position: 233589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233649:1
position: 233649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:233931-234016:1:exon

position:233931:1
position: 233931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:234016:1
position: 234016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:234370-234631:1:exon

position:234370:1
position: 234370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFT46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IFT46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: intraflagellar transport protein 46 homolog
translation: PSAAGAARPGETRRYPVRPGSLVQEEAAAHLPGPATVSEDDDEDDEDSEEDSSESDSEEDSEEHGAALEGDFNPADFDYLQVSPEIKDLFEYIKRYTPKTIEIEHKLQPFIPEFIPAVGDIDAFLKVPRPDGKPDNLGLLILDEPSTKQSDPTVLSLWLTENSKQHNITRQIKVKSLENAENNPKAIESWIESISELHRCKPPATVHYSRPMPDIETLMQEWSPEFEELLGKVGLPSAEMSCDLAEYIDMICAILDIPVYKSRIHSLHVLFSLFLEFKNSQHFKPLADGQKGRSPPSNPSSQAVEAEVLSFN
SIO_010081: IFT46
subclass of: SO_0000673
so part of: IFT46
location: join(<231176..231384,232017..232091,232190..232283,232609..232737,233115..233236,233307..233373,233589..233649,233931..234016,234370..234465)
location: region:231176-234465:1
so has part: feature:231176-231384:1:exon
so has part: feature:232017-232091:1:exon
so has part: feature:232190-232283:1:exon
so has part: feature:232609-232737:1:exon
so has part: feature:233115-233236:1:exon
so has part: feature:233307-233373:1:exon
so has part: feature:233589-233649:1:exon
so has part: feature:233931-234016:1:exon
so has part: feature:234370-234465:1:exon

XP_016159294.1
type: Protein
SIO_000068: ncbiprotein

position:234465:1
position: 234465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231176-231384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232017-232091:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:232190-232283:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232609-232737:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:233115-233236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:233307-233373:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233589-233649:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:233931-234016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:234370-234465:1:exon

TMEM25
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TMEM25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(234657..237976)
location: region:234657-237976:-1
so has part: feature:234657-237976:-1:exon
subclass of: SO_0000010

101810698
type: Gene
SIO_000068: ncbigene

position:234657:-1
position: 234657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237976:-1
position: 237976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234657-237976:-1:exon

TMEM25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMEM25
product: transmembrane protein 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303890.1
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(234657..234731,235336..235451,235549..236019,236997..237287,237510..237791,237878..237976))
location: region:234657-237976:-1
so has part: feature:237878-237976:-1:exon
so has part: feature:237510-237791:-1:exon
so has part: feature:236997-237287:-1:exon
so has part: feature:235549-236019:-1:exon
so has part: feature:235336-235451:-1:exon
so has part: feature:234657-234731:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:237878-237976:-1:exon

position:237878:-1
position: 237878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:237510-237791:-1:exon

position:237510:-1
position: 237510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237791:-1
position: 237791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:236997-237287:-1:exon

position:236997:-1
position: 236997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237287:-1
position: 237287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:235549-236019:-1:exon

position:235549:-1
position: 235549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236019:-1
position: 236019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:235336-235451:-1:exon

position:235336:-1
position: 235336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235451:-1
position: 235451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:234657-234731:-1:exon

position:234731:-1
position: 234731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TMEM25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 25
translation: MGCLRGWPGAALALLLLLLLSLLALCLTVEELDPTTDGQPRAACTLQEGESRIFTCWVPRRVPGATLAWYLNGQKQEIDLSTADTASILTLTAQHSDHQLNCSLTNPTSSETYNTSILLNVQYKPEILREGAHYQQVEGAGLLLVLFVLVQANPPSSITWVDQDGHVMANTSKFLLLGATSYPGLANHSLHIHLSCTAGNLSVSAANSVGITTASLLPTGLLDARVELPVLGVAIGAALATAALLSLGFCATCLVCHMPKLLQGPGQAGGNSPPSQCSHCSSSEPPQPQGTRLPRQTQSLPPDLHLDDLAQEGGGKTLMCQCSKTWGARSCQGEWQMSCISSLCFPAASPKDAGAGSRAEENALLGLENSLVLNKLGFVQLPTSGRIYKVPSMSSEEIWL
SIO_010081: TMEM25
subclass of: SO_0000673
so part of: TMEM25
location: complement(join(235378..235451,235549..236019,236997..237287,237510..237791,237878..237962))
location: region:235378-237962:-1
so has part: feature:237878-237962:-1:exon
so has part: feature:237510-237791:-1:exon
so has part: feature:236997-237287:-1:exon
so has part: feature:235549-236019:-1:exon
so has part: feature:235378-235451:-1:exon

XP_016159376.1
type: Protein
SIO_000068: ncbiprotein

position:235378:-1
position: 235378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237962:-1
position: 237962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237878-237962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:237510-237791:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236997-237287:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:235549-236019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:235378-235451:-1:exon

TTC36
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TTC36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(238435..239705)
location: region:238435-239705:-1
so has part: feature:238435-239705:-1:exon
subclass of: SO_0000010

101810264
type: Gene
SIO_000068: ncbigene

position:238435:-1
position: 238435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239705:-1
position: 239705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238435-239705:-1:exon

TTC36
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TTC36
product: tetratricopeptide repeat domain 36
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005058571.2
SIO_010081: TTC36
subclass of: SO_0000673
so part of: TTC36
location: complement(join(238435..238918,238988..239176,239418..239705))
location: region:238435-239705:-1
so has part: feature:239418-239705:-1:exon
so has part: feature:238988-239176:-1:exon
so has part: feature:238435-238918:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239418-239705:-1:exon

position:239418:-1
position: 239418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:238988-239176:-1:exon

position:238988:-1
position: 238988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239176:-1
position: 239176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:238435-238918:-1:exon

position:238918:-1
position: 238918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC36
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TTC36
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 36
translation: MATANDRAVLQSIFNPSTPFGDIPGLDEEEEDVQDEVEAFPLELLDQVRELELQGVSAAESGDLNTALERFSEAIRLLPERASGYNNRAQALRLRGDVAGALRDLDAAIRLSRGRGRAACQSFVQRGLIHRLQARDEDARRDLERAARLGSAFARQQLVLLNPYSALCNQMLCEMLGRLRNPDGTGSD
SIO_010081: TTC36
subclass of: SO_0000673
so part of: TTC36
location: complement(join(238650..238918,238988..239176,239418..239526))
location: region:238650-239526:-1
so has part: feature:239418-239526:-1:exon
so has part: feature:238988-239176:-1:exon
so has part: feature:238650-238918:-1:exon

XP_005058628.1
type: Protein
SIO_000068: ncbiprotein

position:238650:-1
position: 238650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239526:-1
position: 239526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239418-239526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:238988-239176:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:238650-238918:-1:exon

KMT2A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: KMT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(241905..272737)
location: region:241905-272737:-1
so has part: feature:241905-272737:-1:exon
subclass of: SO_0000010

101813917
type: Gene
SIO_000068: ncbigene

position:241905:-1
position: 241905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272737:-1
position: 272737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241905-272737:-1:exon

KMT2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KMT2A
product: lysine methyltransferase 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303898.1
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(241905..244770,245118..245247,245598..245681,246104..246211,246601..246775,247048..247122,247655..247825,248210..248274,248781..248861,249179..253469,254088..254273,254926..255086,255336..255414,255494..255611,255892..256050,256564..256701,256844..256950,257264..257457,257957..258030,258267..258377,259179..259352,259937..260121,260458..260571,261313..261433,262233..262328,262581..262727,263858..263971,264826..264954,265552..265625,266464..266613,267145..267209,268056..268290,268646..268823,270093..272737))
location: region:241905-272737:-1
so has part: feature:270093-272737:-1:exon
so has part: feature:268646-268823:-1:exon
so has part: feature:268056-268290:-1:exon
so has part: feature:267145-267209:-1:exon
so has part: feature:266464-266613:-1:exon
so has part: feature:265552-265625:-1:exon
so has part: feature:264826-264954:-1:exon
so has part: feature:263858-263971:-1:exon
so has part: feature:262581-262727:-1:exon
so has part: feature:262233-262328:-1:exon
so has part: feature:261313-261433:-1:exon
so has part: feature:260458-260571:-1:exon
so has part: feature:259937-260121:-1:exon
so has part: feature:259179-259352:-1:exon
so has part: feature:258267-258377:-1:exon
so has part: feature:257957-258030:-1:exon
so has part: feature:257264-257457:-1:exon
so has part: feature:256844-256950:-1:exon
so has part: feature:256564-256701:-1:exon
so has part: feature:255892-256050:-1:exon
so has part: feature:255494-255611:-1:exon
so has part: feature:255336-255414:-1:exon
so has part: feature:254926-255086:-1:exon
so has part: feature:254088-254273:-1:exon
so has part: feature:249179-253469:-1:exon
so has part: feature:248781-248861:-1:exon
so has part: feature:248210-248274:-1:exon
so has part: feature:247655-247825:-1:exon
so has part: feature:247048-247122:-1:exon
so has part: feature:246601-246775:-1:exon
so has part: feature:246104-246211:-1:exon
so has part: feature:245598-245681:-1:exon
so has part: feature:245118-245247:-1:exon
so has part: feature:241905-244770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270093-272737:-1:exon

position:270093:-1
position: 270093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268646-268823:-1:exon

position:268646:-1
position: 268646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268823:-1
position: 268823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268290:-1:exon

position:268056:-1
position: 268056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268290:-1
position: 268290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:267145-267209:-1:exon

position:267145:-1
position: 267145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267209:-1
position: 267209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:266464-266613:-1:exon

position:266464:-1
position: 266464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266613:-1
position: 266613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:265552-265625:-1:exon

position:265552:-1
position: 265552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265625:-1
position: 265625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264826-264954:-1:exon

position:264826:-1
position: 264826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264954:-1
position: 264954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:263858-263971:-1:exon

position:263858:-1
position: 263858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263971:-1
position: 263971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:262581-262727:-1:exon

position:262581:-1
position: 262581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262727:-1
position: 262727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:262233-262328:-1:exon

position:262233:-1
position: 262233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262328:-1
position: 262328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:261313-261433:-1:exon

position:261313:-1
position: 261313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261433:-1
position: 261433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:260458-260571:-1:exon

position:260458:-1
position: 260458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260571:-1
position: 260571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:259937-260121:-1:exon

position:259937:-1
position: 259937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260121:-1
position: 260121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:259179-259352:-1:exon

position:259179:-1
position: 259179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259352:-1
position: 259352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:258267-258377:-1:exon

position:258267:-1
position: 258267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258377:-1
position: 258377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:257957-258030:-1:exon

position:257957:-1
position: 257957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258030:-1
position: 258030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:257264-257457:-1:exon

position:257264:-1
position: 257264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257457:-1
position: 257457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:256844-256950:-1:exon

position:256844:-1
position: 256844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256950:-1
position: 256950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:256564-256701:-1:exon

position:256564:-1
position: 256564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256701:-1
position: 256701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:255892-256050:-1:exon

position:255892:-1
position: 255892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256050:-1
position: 256050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:255494-255611:-1:exon

position:255494:-1
position: 255494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255611:-1
position: 255611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:255336-255414:-1:exon

position:255336:-1
position: 255336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255414:-1
position: 255414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:254926-255086:-1:exon

position:254926:-1
position: 254926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255086:-1
position: 255086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:254088-254273:-1:exon

position:254088:-1
position: 254088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254273:-1
position: 254273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:249179-253469:-1:exon

position:249179:-1
position: 249179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253469:-1
position: 253469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:248781-248861:-1:exon

position:248781:-1
position: 248781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248861:-1
position: 248861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:248210-248274:-1:exon

position:248210:-1
position: 248210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248274:-1
position: 248274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:247655-247825:-1:exon

position:247655:-1
position: 247655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247825:-1
position: 247825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:247048-247122:-1:exon

position:247048:-1
position: 247048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247122:-1
position: 247122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:246601-246775:-1:exon

position:246601:-1
position: 246601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246775:-1
position: 246775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:246104-246211:-1:exon

position:246104:-1
position: 246104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246211:-1
position: 246211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:245598-245681:-1:exon

position:245598:-1
position: 245598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245681:-1
position: 245681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:245118-245247:-1:exon

position:245118:-1
position: 245118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245247:-1
position: 245247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:241905-244770:-1:exon

position:244770:-1
position: 244770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KMT2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KMT2A
product: lysine methyltransferase 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016303897.1
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(241905..244770,245118..245247,245598..245681,246104..246211,246601..246775,247048..247122,247655..247825,248210..248274,248781..248861,249179..253469,254088..254273,254926..255086,255336..255414,255494..255611,255892..256050,256564..256701,256844..256950,257264..257454,257957..258030,258267..258377,259179..259352,259937..260121,260458..260571,261313..261433,262233..262328,262581..262727,263858..263971,264826..264954,265552..265625,266242..266613,267145..267209,268056..268290,268646..268823,270093..272737))
location: region:241905-272737:-1
so has part: feature:270093-272737:-1:exon
so has part: feature:268646-268823:-1:exon
so has part: feature:268056-268290:-1:exon
so has part: feature:267145-267209:-1:exon
so has part: feature:266242-266613:-1:exon
so has part: feature:265552-265625:-1:exon
so has part: feature:264826-264954:-1:exon
so has part: feature:263858-263971:-1:exon
so has part: feature:262581-262727:-1:exon
so has part: feature:262233-262328:-1:exon
so has part: feature:261313-261433:-1:exon
so has part: feature:260458-260571:-1:exon
so has part: feature:259937-260121:-1:exon
so has part: feature:259179-259352:-1:exon
so has part: feature:258267-258377:-1:exon
so has part: feature:257957-258030:-1:exon
so has part: feature:257264-257454:-1:exon
so has part: feature:256844-256950:-1:exon
so has part: feature:256564-256701:-1:exon
so has part: feature:255892-256050:-1:exon
so has part: feature:255494-255611:-1:exon
so has part: feature:255336-255414:-1:exon
so has part: feature:254926-255086:-1:exon
so has part: feature:254088-254273:-1:exon
so has part: feature:249179-253469:-1:exon
so has part: feature:248781-248861:-1:exon
so has part: feature:248210-248274:-1:exon
so has part: feature:247655-247825:-1:exon
so has part: feature:247048-247122:-1:exon
so has part: feature:246601-246775:-1:exon
so has part: feature:246104-246211:-1:exon
so has part: feature:245598-245681:-1:exon
so has part: feature:245118-245247:-1:exon
so has part: feature:241905-244770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270093-272737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268646-268823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:267145-267209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266242-266613:-1:exon

position:266242:-1
position: 266242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:265552-265625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264826-264954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263858-263971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262581-262727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262233-262328:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261313-261433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260458-260571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259937-260121:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259179-259352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:258267-258377:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:257957-258030:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:257264-257454:-1:exon

position:257454:-1
position: 257454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:256844-256950:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:256564-256701:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:255892-256050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:255494-255611:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:255336-255414:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:254926-255086:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:254088-254273:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:249179-253469:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:248781-248861:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:248210-248274:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:247655-247825:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:247048-247122:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:246601-246775:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:246104-246211:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:245598-245681:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:245118-245247:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:241905-244770:-1:exon

KMT2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KMT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2A isoform X2
translation: MEKVKKKESKSGEKRRGRPPTLTSVKFKLSQEKDTSDIQKGSKDEKESLKKIKRSPSTTFQQATKIKKLRTSKLSPLKSKFKPGAKLQIGRKSVQMVRRRGRPPSSERLKTSSALVINSQLEKPQRIRKEKDGTPPLTKEEKAAVRQSPRRIKPVRIIPSTKRTDAAIAKQLLQRAKKGAQKKIEKEAAKLQGRKGRTQLKNIRQFIMPVVSAISSRIIKTPKRFIEDEDYDPPIKISRLESTPNSRFSTTSCGSSEKSSAASQHSSQMSSDSSRSSSPSVDTSTDSQASEEMQMLSEERSNTPEVHTPLPVSQSPENDNGDRRNRRFSITERSFGQRTTKKLSALPSMPQQQSSSSPPPPLLTPPPPLQPASGISDHTPWLMPPTIPLASPFLPTSAAPMQEKRKSILREPTFRWTSLKHSRSEPQYFSSAKYAKEGLIRKPIFDNFRPPPLTPEDVGFASGFSTPGATAPTRLFSLHSGARFDMHKRSPLLRAPRFTPSEAHSRIFESVTLPSSVGRSTAGASATGTSSRRRKRKAFSPIRSEPRSPSHSMRTRSGRLSTSDLTTLTPQSSVSSSLTSISVSSLATSALNSTFTFPSHSLSQSGESAERSQRPRKQTSAPAEPFSSGSPTPLFPWFTSSPQTERGKNKDRAAEELSKDKDADKSLEKDKSREKDREREKENKRESRKEKRRKGSEIQNSAALFPVGKTPKEKVSEDAAASSSAKKTSGRKKSTAVDPTADASTAALVDTTAVKTKTSKKGRGGLDKSDLDLSPTVPSLEKEKALRLSAPSSSTVKHSASSISSMLAQADKLPMTDKRVASLLKKAKAQLYKIEKSKSLKQADQPKAQGQESDSSETSVRGPRIKHVCRRAAVALGRKRAVFPDDMPTLSALPWEEREKILSSMGNDDKSSIAGSEEAEPLAPPIKPIKPVTRNKAQQEPPVKKGRRSRRCGQCSGCQVPEDCGVCTNCLDKPKFGGRNIKKQCCKMRKCQNLQWMPSKAYLQKQAKAAKKKEKKSKTNEKKESHSGKNQLDSGQKQTPQAVVPREDNAGKKSCEPARTEQSKQKKIAPRPTFPVKQKPKEKEKPPPLSKPESSTLNLLSTLTNGSSSKQKPPPDGVHRIRVDFKEDCEVENVWEMGGLGIVTSVPITPRVVCFLCASSGHVEFVYCQVCCEPFHKFCLEESERPQEDQLENWCCRRCKFCHVCGRQHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCVRCKSCGSTTPGKGWDAQWSHDFSLCHDCAKLFAKGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCINCTEQHPAEWRLALEKELQISLRQVLTALLNSRTTSHLLRYRQAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSKQEEQQPLDLEGVKRKMDQGSYTSVLDFSDDIVKIIQAAINADGGQPEIKKANSMVKSFFIRQMERVFPWFSVKKSRFWEPNKVTSNSGMLPNAVLPPSLDHNYAQWQEREENNCTEQPPLMKKIIPAPKLRGPGEPDSPTPLHPPTPPISGSDRSREDSPELNPPPDVEDNRQCALCLKYGDDSANDAGRLLYIGQNEWTHVNCALWSAEVFEDDDGSLKNVHMAVIRGKQLRCEFCQKSGATVGCCLTSCTSNYHFMCSRVKNCVFLDDKKVYCQRHRDLIKGEVVPENGFEVLRRVFVDFEGISLRRKFLSGLEPENIHMMIGSMTIDCLGILNDLSDCEDKLFPIGYQCSRVYWSTTDARKRCVYTCKIMECRPPVVEPDINSTVEHDDNRTIAHSPVPLTEILPKDTRNTPEIVNPPSPDRPLYSQTSGSCYYPVVSKGPRIRAPSYPSAQRSPGSRPLPSAGSPTPVTHEIVTVGDPLLSSGLKSIGSRRHSTSSLSQQQSKLRMVSPTRAGSAYSRHSVSSVSSMGASSEYEPTVRSTDRFVGSVSMGPTSAPVQSCSTSSGSQKTVATNGNKIY…
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(244495..244770,245118..245247,245598..245681,246104..246211,246601..246775,247048..247122,247655..247825,248210..248274,248781..248861,249179..253469,254088..254273,254926..255086,255336..255414,255494..255611,255892..256050,256564..256701,256844..256950,257264..257457,257957..258030,258267..258377,259179..259352,259937..260121,260458..260571,261313..261433,262233..262328,262581..262727,263858..263971,264826..264954,265552..265625,266464..266613,267145..267209,268056..268290,268646..268823,270093..272639))
location: region:244495-272639:-1
so has part: feature:270093-272639:-1:exon
so has part: feature:268646-268823:-1:exon
so has part: feature:268056-268290:-1:exon
so has part: feature:267145-267209:-1:exon
so has part: feature:266464-266613:-1:exon
so has part: feature:265552-265625:-1:exon
so has part: feature:264826-264954:-1:exon
so has part: feature:263858-263971:-1:exon
so has part: feature:262581-262727:-1:exon
so has part: feature:262233-262328:-1:exon
so has part: feature:261313-261433:-1:exon
so has part: feature:260458-260571:-1:exon
so has part: feature:259937-260121:-1:exon
so has part: feature:259179-259352:-1:exon
so has part: feature:258267-258377:-1:exon
so has part: feature:257957-258030:-1:exon
so has part: feature:257264-257457:-1:exon
so has part: feature:256844-256950:-1:exon
so has part: feature:256564-256701:-1:exon
so has part: feature:255892-256050:-1:exon
so has part: feature:255494-255611:-1:exon
so has part: feature:255336-255414:-1:exon
so has part: feature:254926-255086:-1:exon
so has part: feature:254088-254273:-1:exon
so has part: feature:249179-253469:-1:exon
so has part: feature:248781-248861:-1:exon
so has part: feature:248210-248274:-1:exon
so has part: feature:247655-247825:-1:exon
so has part: feature:247048-247122:-1:exon
so has part: feature:246601-246775:-1:exon
so has part: feature:246104-246211:-1:exon
so has part: feature:245598-245681:-1:exon
so has part: feature:245118-245247:-1:exon
so has part: feature:244495-244770:-1:exon

XP_016159384.1
type: Protein
SIO_000068: ncbiprotein

position:244495:-1
position: 244495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272639:-1
position: 272639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270093-272639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268646-268823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:267145-267209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266464-266613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265552-265625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264826-264954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263858-263971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262581-262727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262233-262328:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261313-261433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260458-260571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259937-260121:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259179-259352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:258267-258377:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:257957-258030:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:257264-257457:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:256844-256950:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:256564-256701:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:255892-256050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:255494-255611:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:255336-255414:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:254926-255086:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:254088-254273:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:249179-253469:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:248781-248861:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:248210-248274:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:247655-247825:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:247048-247122:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:246601-246775:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:246104-246211:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:245598-245681:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:245118-245247:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:244495-244770:-1:exon

KMT2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KMT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2A isoform X1
translation: MEKVKKKESKSGEKRRGRPPTLTSVKFKLSQEKDTSDIQKGSKDEKESLKKIKRSPSTTFQQATKIKKLRTSKLSPLKSKFKPGAKLQIGRKSVQMVRRRGRPPSSERLKTSSALVINSQLEKPQRIRKEKDGTPPLTKEEKAAVRQSPRRIKPVRIIPSTKRTDAAIAKQLLQRAKKGAQKKIEKEAAKLQGRKGRTQLKNIRQFIMPVVSAISSRIIKTPKRFIEDEDYDPPIKISRLESTPNSRFSTTSCGSSEKSSAASQHSSQMSSDSSRSSSPSVDTSTDSQASEEMQMLSEERSNTPEVHTPLPVSQSPENDNGDRRNRRFSITERSFGQRTTKKLSALPSMPQQQSSSSPPPPLLTPPPPLQPASGISDHTPWLMPPTIPLASPFLPTSAAPMQEKRKSILREPTFRWTSLKHSRSEPQYFSSAKYAKEGLIRKPIFDNFRPPPLTPEDVGFASGFSTPGATAPTRLFSLHSGARFDMHKRSPLLRAPRFTPSEAHSRIFESVTLPSSVGRSTAGASATGTSSRRRKRKAFSPIRSEPRSPSHSMRTRSGRLSTSDLTTLTPQSSVSSSLTSISVSSLATSALNSTFTFPSHSLSQSGESAERSQRPRKQTSAPAEPFSSGSPTPLFPWFTSSPQTERGKNKDRAAEELSKDKDADKSLEKDKSREKDREREKENKRESRKEKRRKGSEIQNSAALFPVGKTPKEKVSEDAAASSSAKKTSGRKKSTAVDPTADASTAALVDTTAVKTKTSKKGRGGLDKSDLDLSPTVPSLEKEKALRLSAPSSSTVKHSASSISSMLAQADKLPMTDKRVASLLKKAKAQLYKIEKSKSLKQADQPKAQGQESDSSETSVRGPRIKHVCRRAAVALGRKRAVFPDDMPTLSALPWEEREKILSSMGNDDKSSIAGSEEAEPLAPPIKPIKPVTRNKAQQEPPVKKGRRSRRCGQCSGCQVPEDCGVCTNCLDKPKFGGRNIKKQCCKMRKCQNLQWMPSKAYLQKQAKAAKKKEKKSKTNEKKESHSGKNQLDSGQKQTPQAVVPREDNAGKKSCEPARKPVEEKHEDGNSSIPVSEPKQVPTSGTRKTGKQISQPVQPPPSQPPSLGPLKKEAPKLSTSEPKKKQTPQPEIGTEQSKQKKIAPRPTFPVKQKPKEKEKPPPLSKPESSTLNLLSTLTNGSSSKQKPPPDGVHRIRVDFKEDCEVENVWEMGGLGIVTSVPITPRVVCFLCASSGHVEFVYCQVCCEPFHKFCLEESERPQEDQLENWCCRRCKFCHVCGRQHQATKQLLECNKCRNSYHPECLGPNYPTKPTKKKKVWICTKCVRCKSCGSTTPGKGWDAQWSHDFSLCHDCAKLFAKGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCINCTEQHPAEWRLALEKELQISLRQVLTALLNSRTTSHLLRYRQAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSKQEEQQPLDLEGVKRKMDQGSYTSVLDFSDDIVKIIQAAINADGGQPEIKKANSMVKSFFIRQMERVFPWFSVKKSRFWEPNKVTSNGMLPNAVLPPSLDHNYAQWQEREENNCTEQPPLMKKIIPAPKLRGPGEPDSPTPLHPPTPPISGSDRSREDSPELNPPPDVEDNRQCALCLKYGDDSANDAGRLLYIGQNEWTHVNCALWSAEVFEDDDGSLKNVHMAVIRGKQLRCEFCQKSGATVGCCLTSCTSNYHFMCSRVKNCVFLDDKKVYCQRHRDLIKGEVVPENGFEVLRRVFVDFEGISLRRKFLSGLEPENIHMMIGSMTIDCLGILNDLSDCEDKLFPIGYQCSRVYWSTTDARKRCVYTCKIMECRPPVVEPDINSTVEHDDNRTIAHSPVPLTEILPKDTRNTPEIVNPPSPDRPLYSQTSGSCYYPVVSKGPRIRAPSYPSAQRSPGSRPLPSAGSPTPVTHEIVTVGDPLLSSGLKSIGSRRHSTSSLSQQQSKL…
SIO_010081: KMT2A
subclass of: SO_0000673
so part of: KMT2A
location: complement(join(244495..244770,245118..245247,245598..245681,246104..246211,246601..246775,247048..247122,247655..247825,248210..248274,248781..248861,249179..253469,254088..254273,254926..255086,255336..255414,255494..255611,255892..256050,256564..256701,256844..256950,257264..257454,257957..258030,258267..258377,259179..259352,259937..260121,260458..260571,261313..261433,262233..262328,262581..262727,263858..263971,264826..264954,265552..265625,266242..266613,267145..267209,268056..268290,268646..268823,270093..272639))
location: region:244495-272639:-1
so has part: feature:270093-272639:-1:exon
so has part: feature:268646-268823:-1:exon
so has part: feature:268056-268290:-1:exon
so has part: feature:267145-267209:-1:exon
so has part: feature:266242-266613:-1:exon
so has part: feature:265552-265625:-1:exon
so has part: feature:264826-264954:-1:exon
so has part: feature:263858-263971:-1:exon
so has part: feature:262581-262727:-1:exon
so has part: feature:262233-262328:-1:exon
so has part: feature:261313-261433:-1:exon
so has part: feature:260458-260571:-1:exon
so has part: feature:259937-260121:-1:exon
so has part: feature:259179-259352:-1:exon
so has part: feature:258267-258377:-1:exon
so has part: feature:257957-258030:-1:exon
so has part: feature:257264-257454:-1:exon
so has part: feature:256844-256950:-1:exon
so has part: feature:256564-256701:-1:exon
so has part: feature:255892-256050:-1:exon
so has part: feature:255494-255611:-1:exon
so has part: feature:255336-255414:-1:exon
so has part: feature:254926-255086:-1:exon
so has part: feature:254088-254273:-1:exon
so has part: feature:249179-253469:-1:exon
so has part: feature:248781-248861:-1:exon
so has part: feature:248210-248274:-1:exon
so has part: feature:247655-247825:-1:exon
so has part: feature:247048-247122:-1:exon
so has part: feature:246601-246775:-1:exon
so has part: feature:246104-246211:-1:exon
so has part: feature:245598-245681:-1:exon
so has part: feature:245118-245247:-1:exon
so has part: feature:244495-244770:-1:exon

XP_016159383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:270093-272639:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268646-268823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268056-268290:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:267145-267209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:266242-266613:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265552-265625:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264826-264954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263858-263971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262581-262727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262233-262328:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261313-261433:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260458-260571:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259937-260121:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259179-259352:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:258267-258377:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:257957-258030:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:257264-257454:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:256844-256950:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:256564-256701:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:255892-256050:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:255494-255611:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:255336-255414:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:254926-255086:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:254088-254273:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:249179-253469:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:248781-248861:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:248210-248274:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:247655-247825:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:247048-247122:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:246601-246775:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:246104-246211:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:245598-245681:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:245118-245247:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:244495-244770:-1:exon

ATP5L
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ATP5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(285390..286986)
location: region:285390-286986:-1
so has part: feature:285390-286986:-1:exon
subclass of: SO_0000010

101812199
type: Gene
SIO_000068: ncbigene

position:285390:-1
position: 285390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286986:-1
position: 286986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285390-286986:-1:exon

ATP5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ATP5L
product: ATP synthase, H+ transporting, mitochondrial Fo complex subunit G
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005058582.2
SIO_010081: ATP5L
subclass of: SO_0000673
so part of: ATP5L
location: complement(join(285390..285565,286144..286304,286846..286986))
location: region:285390-286986:-1
so has part: feature:286846-286986:-1:exon
so has part: feature:286144-286304:-1:exon
so has part: feature:285390-285565:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286846-286986:-1:exon

position:286846:-1
position: 286846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286144-286304:-1:exon

position:286144:-1
position: 286144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286304:-1
position: 286304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:285390-285565:-1:exon

position:285565:-1
position: 285565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ATP5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit g, mitochondrial
translation: MAKAAQGLVQRLVQRGPELIGAAVTYSKPRLATFWYYAKVELAPPTPAEIPRAIDSMKGLVRAFQSGRLAQLTVKDALRNGLVATEVLMWFYIGEIIGKRGIIGYNV
SIO_010081: ATP5L
subclass of: SO_0000673
so part of: ATP5L
location: complement(join(285467..285565,286144..286304,286846..286909))
location: region:285467-286909:-1
so has part: feature:286846-286909:-1:exon
so has part: feature:286144-286304:-1:exon
so has part: feature:285467-285565:-1:exon

XP_005058639.1
type: Protein
SIO_000068: ncbiprotein

position:285467:-1
position: 285467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286909:-1
position: 286909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286846-286909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286144-286304:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:285467-285565:-1:exon

UBE4A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: UBE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(287282..297870)
location: region:287282-297870:-1
so has part: feature:287282-297870:-1:exon
subclass of: SO_0000010

101811483
type: Gene
SIO_000068: ncbigene

position:287282:-1
position: 287282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297870:-1
position: 297870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287282-297870:-1:exon

UBE4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: UBE4A
product: ubiquitination factor E4A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016303902.1
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(287282..288044,288188..288345,288579..288726,288933..289113,289235..289409,290086..290199,290324..290424,290511..290698,291691..291823,292389..292696,293625..293751,294010..294343,295178..295369,295585..295787,295952..296111,296208..296360,296923..297035,297222..297398,297509..297673,297814..297870))
location: region:287282-297870:-1
so has part: feature:297814-297870:-1:exon
so has part: feature:297509-297673:-1:exon
so has part: feature:297222-297398:-1:exon
so has part: feature:296923-297035:-1:exon
so has part: feature:296208-296360:-1:exon
so has part: feature:295952-296111:-1:exon
so has part: feature:295585-295787:-1:exon
so has part: feature:295178-295369:-1:exon
so has part: feature:294010-294343:-1:exon
so has part: feature:293625-293751:-1:exon
so has part: feature:292389-292696:-1:exon
so has part: feature:291691-291823:-1:exon
so has part: feature:290511-290698:-1:exon
so has part: feature:290324-290424:-1:exon
so has part: feature:290086-290199:-1:exon
so has part: feature:289235-289409:-1:exon
so has part: feature:288933-289113:-1:exon
so has part: feature:288579-288726:-1:exon
so has part: feature:288188-288345:-1:exon
so has part: feature:287282-288044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:297814-297870:-1:exon

position:297814:-1
position: 297814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297509-297673:-1:exon

position:297509:-1
position: 297509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297673:-1
position: 297673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297222-297398:-1:exon

position:297222:-1
position: 297222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297398:-1
position: 297398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296923-297035:-1:exon

position:296923:-1
position: 296923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297035:-1
position: 297035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296208-296360:-1:exon

position:296208:-1
position: 296208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296360:-1
position: 296360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:295952-296111:-1:exon

position:295952:-1
position: 295952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296111:-1
position: 296111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:295585-295787:-1:exon

position:295585:-1
position: 295585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295787:-1
position: 295787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:295178-295369:-1:exon

position:295178:-1
position: 295178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295369:-1
position: 295369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:294010-294343:-1:exon

position:294010:-1
position: 294010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294343:-1
position: 294343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:293625-293751:-1:exon

position:293625:-1
position: 293625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293751:-1
position: 293751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:292389-292696:-1:exon

position:292389:-1
position: 292389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292696:-1
position: 292696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:291691-291823:-1:exon

position:291691:-1
position: 291691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291823:-1
position: 291823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:290511-290698:-1:exon

position:290511:-1
position: 290511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290698:-1
position: 290698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:290324-290424:-1:exon

position:290324:-1
position: 290324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290424:-1
position: 290424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:290086-290199:-1:exon

position:290086:-1
position: 290086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290199:-1
position: 290199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:289235-289409:-1:exon

position:289235:-1
position: 289235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289409:-1
position: 289409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:288933-289113:-1:exon

position:288933:-1
position: 288933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289113:-1
position: 289113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:288579-288726:-1:exon

position:288579:-1
position: 288579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288726:-1
position: 288726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:288188-288345:-1:exon

position:288188:-1
position: 288188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288345:-1
position: 288345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:287282-288044:-1:exon

position:288044:-1
position: 288044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBE4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: UBE4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin conjugation factor E4 A
translation: MTDQENNNSISSNPFAALFGSVAAAKHFAAIQKQQQLRQLTGEETSISQDDSDNSVSESLDDCDYSVAEISRSFRSQRELCEQLNINHMIQRIFLITLDNSDPSMKSGNGIPARCVYLEEMAADLDDQDWLDMDNVEQALFTRLLLPEPGSHLIHMTCAGTQNLSAERDAGERQILRYLYACFRRAREEITKVPENLLPFAVRCRNLTVSNTRTVLLTPEIYVNQNVYEQLVDLMLETLRGAQFEDMTEFLEDVIEALTTDEEVRTFGEVMVPVFDILLGRIKDLDLCQILLYTYLDVLLYFTKQKDIAKVFAGYIQPKDPSNGQMYQKTLLGAVLNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQESNIHQFMAQFHEKIYQMLKNLLQLSPETKHRILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSPKLLTFNPTYCALKELNEEERRSKNVHMKGLEKETCLIPALSEQEPQFANSYNLVTENLVLTQYTLHLGFHRLHDQMVKINQSLHRLQVAWREAQQSSSPAADSLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAVGNCGTEPLELRFPLPAVQHSALAYVPEFFADNLGDFFIFLRRFADDILETSADSLEHILHFITVFMGDVERMKNPHLRAKLAEVLEAVMPHLDQAQSPLVSSVFHRKRVFCSYQHAGHLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWDTDSYQDSIKALADYASENLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKVQQIEKDRGEWDSLSPEARREKESSLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVSFSNLAERIKSLADRQQQEEETYADACDEFLDPIMSTLMSDPVILPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKKQKEEELEDTLN
SIO_010081: UBE4A
subclass of: SO_0000673
so part of: UBE4A
location: complement(join(287903..288044,288188..288345,288579..288726,288933..289113,289235..289409,290086..290199,290324..290424,290511..290698,291691..291823,292389..292696,293625..293751,294010..294343,295178..295369,295585..295787,295952..296111,296208..296360,296923..297035,297222..297398,297509..297632))
location: region:287903-297632:-1
so has part: feature:297509-297632:-1:exon
so has part: feature:297222-297398:-1:exon
so has part: feature:296923-297035:-1:exon
so has part: feature:296208-296360:-1:exon
so has part: feature:295952-296111:-1:exon
so has part: feature:295585-295787:-1:exon
so has part: feature:295178-295369:-1:exon
so has part: feature:294010-294343:-1:exon
so has part: feature:293625-293751:-1:exon
so has part: feature:292389-292696:-1:exon
so has part: feature:291691-291823:-1:exon
so has part: feature:290511-290698:-1:exon
so has part: feature:290324-290424:-1:exon
so has part: feature:290086-290199:-1:exon
so has part: feature:289235-289409:-1:exon
so has part: feature:288933-289113:-1:exon
so has part: feature:288579-288726:-1:exon
so has part: feature:288188-288345:-1:exon
so has part: feature:287903-288044:-1:exon

XP_016159388.1
type: Protein
SIO_000068: ncbiprotein

position:287903:-1
position: 287903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297632:-1
position: 297632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297509-297632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297222-297398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296923-297035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296208-296360:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:295952-296111:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:295585-295787:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:295178-295369:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:294010-294343:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293625-293751:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:292389-292696:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291691-291823:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:290511-290698:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290324-290424:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:290086-290199:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:289235-289409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:288933-289113:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:288579-288726:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:288188-288345:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:287903-288044:-1:exon

LOC101811286
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101811286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(300033..302659)
location: region:300033-302659:-1
so has part: feature:300033-302659:-1:exon
subclass of: SO_0000010

101811286
type: Gene
SIO_000068: ncbigene

position:300033:-1
position: 300033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302659:-1
position: 302659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300033-302659:-1:exon

LOC101811286
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811286
product: G protein-activated inward rectifier potassium channel 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005058575.2
SIO_010081: LOC101811286
subclass of: SO_0000673
so part of: LOC101811286
location: complement(join(300033..300577,300799..301944,302065..302101,302214..302659))
location: region:300033-302659:-1
so has part: feature:302214-302659:-1:exon
so has part: feature:302065-302101:-1:exon
so has part: feature:300799-301944:-1:exon
so has part: feature:300033-300577:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302214-302659:-1:exon

position:302214:-1
position: 302214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:302065-302101:-1:exon

position:302065:-1
position: 302065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302101:-1
position: 302101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:300799-301944:-1:exon

position:300799:-1
position: 300799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301944:-1
position: 301944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:300033-300577:-1:exon

position:300577:-1
position: 300577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101811286
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4-like
translation: MPLWPLMGLAIWSQRRHPARLRNRDLRCWARGAPPDPDPGNADRGRSPKLLFVSEITPALSPPWQELAASPGLSPRPGAAMVLPYARDSGGVGGWLAPEEPRGRSNSIPPAQTHTAKHMLAYLPRPPTDTSRYGTFPQKPDLPVPRALVKDGGQQAAATAAKRGAPMPNCPSAPRHSGFVAAEPSGPPSRGSLSAQQHRGRPSWCPPPAPQECAPRLYPLHTLSVANIPNSSRGKTSARSSTIPTPEGLQSRRCKLLEEDSPMVQAGKRQRQRYVTKVGKCQVNLGNIQDKKRFLSDIFTTIVDLKYRWFLFVFMMCYIITWVVFGFIYFFDAWVRGDIGHQGDPEWQACIENVDGFVSALLLSVESQRTIGYGTRMVTANCAEGVILLMAQSIVGSMIDAMMVGCMFVKISRPKKRAQTLIFSKNCVISRRDEKLCLMFRVGDLRESHMVDAKIRAKLIKSRQTAEGEFIPLEQSELNLGYDTGEDRLFLVEPQIICHVINHHSPFWDMSAESLRREQFEIIIILEGIVEATGMTCQARTSYTEDEILWGYRFEPCMSLEKGAFQVDYSRFEMTFEVQTPAASAKELHELKELEQQEHSTLSLYWDHLLQPCALPGPGEDALLGTSVPGSVAEGARDEPPEREFPA
SIO_010081: LOC101811286
subclass of: SO_0000673
so part of: LOC101811286
location: complement(join(300234..300577,300799..301944,302065..302101,302214..302630))
location: region:300234-302630:-1
so has part: feature:302214-302630:-1:exon
so has part: feature:302065-302101:-1:exon
so has part: feature:300799-301944:-1:exon
so has part: feature:300234-300577:-1:exon

XP_005058632.2
type: Protein
SIO_000068: ncbiprotein

position:300234:-1
position: 300234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302630:-1
position: 302630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302214-302630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:302065-302101:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:300799-301944:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:300234-300577:-1:exon

CLDN25
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CLDN25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 303260..307183
location: region:303260-307183:1
so has part: feature:303260-307183:1:exon
subclass of: SO_0000010

101812531
type: Gene
SIO_000068: ncbigene

position:303260:1
position: 303260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307183:1
position: 307183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303260-307183:1:exon

CLDN25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CLDN25
product: claudin 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005058583.1
SIO_010081: CLDN25
subclass of: SO_0000673
so part of: CLDN25
location: 303260..307183
location: region:303260-307183:1
so has part: feature:303260-307183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:303260-307183:1:exon

CLDN25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CLDN25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative claudin-25
translation: MAGGWGAKAQGGGMLLALLGWISSCVTTFVPLWKNLNLDLNELEVWNMGLWQVCITQEEGVVECQAHGSFLALPPELRISRLLMCLSNGLGLLGCLLAALGLEGWRTCEDKPGRKRRLLLGGGVTLGVAGITTLVPVSWVAYDTVLDFWDETVPDIVPRWEFGEATFLGWFAGAFLAVGGLLLACSTRSTKTATPLAPACHQAPACHQGPAAPGLPGGHHLHPRNADLVI
SIO_010081: CLDN25
subclass of: SO_0000673
so part of: CLDN25
location: 304654..305346
location: region:304654-305346:1
so has part: feature:304654-305346:1:exon

XP_005058640.1
type: Protein
SIO_000068: ncbiprotein

position:304654:1
position: 304654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305346:1
position: 305346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304654-305346:1:exon

USP28
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307289..338502)
location: region:307289-338502:-1
so has part: feature:307289-338502:-1:exon
subclass of: SO_0000010

101812926
type: Gene
SIO_000068: ncbigene

position:307289:-1
position: 307289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338502:-1
position: 338502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307289-338502:-1:exon

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016303906.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(307289..308927,309728..309926,310425..310548,311499..311578,311866..311944,312037..312215,313027..313122,313993..314178,314365..314504,315015..315218,316471..316699,317008..317078,317307..317521,318211..318384,318724..318819,318991..319118,321107..321255,321374..321450,321887..321960,322374..322511,322939..323025,323952..324114,324306..324487,324914..324980))
location: region:307289-324980:-1
so has part: feature:324914-324980:-1:exon
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so has part: feature:307289-308927:-1:exon

position:324980:-1
position: 324980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324914-324980:-1:exon

position:324914:-1
position: 324914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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position:324306:-1
position: 324306
reference: sequence
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position:324487:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:323952-324114:-1:exon

position:323952:-1
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position:324114:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:322939-323025:-1:exon

position:322939:-1
position: 322939
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type: ReverseStrandPosition
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position:323025:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:322374-322511:-1:exon

position:322374:-1
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reference: sequence
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position:322511:-1
position: 322511
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:321887-321960:-1:exon

position:321887:-1
position: 321887
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position:321960:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:321374-321450:-1:exon

position:321374:-1
position: 321374
reference: sequence
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position:321450:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:321107-321255:-1:exon

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position: 321107
reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:318991-319118:-1:exon

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reference: sequence
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position:319118:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:318724-318819:-1:exon

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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:318211-318384:-1:exon

position:318211:-1
position: 318211
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:317307-317521:-1:exon

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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:317008-317078:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:316471-316699:-1:exon

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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:313027-313122:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:312037-312215:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:311866-311944:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:311499-311578:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:310425-310548:-1:exon

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urn:…
SIO_000300: 23
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SIO_000300: 24
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reference: sequence
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USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303905.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(307290..308927,309728..309926,310425..310548,311499..311578,311866..311944,312037..312215,313027..313122,313993..314178,314365..314504,315015..315218,316471..316699,317008..317078,317307..317521,318211..318384,318724..318819,318991..319118,321107..321255,321374..321450,321887..321960,322374..322511,322939..323025,323952..324114,324306..324417,324914..325028,325256..325333,338494..338502))
location: region:307290-338502:-1
so has part: feature:338494-338502:-1:exon
so has part: feature:325256-325333:-1:exon
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so has part: feature:318991-319118:-1:exon
so has part: feature:318724-318819:-1:exon
so has part: feature:318211-318384:-1:exon
so has part: feature:317307-317521:-1:exon
so has part: feature:317008-317078:-1:exon
so has part: feature:316471-316699:-1:exon
so has part: feature:315015-315218:-1:exon
so has part: feature:314365-314504:-1:exon
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so has part: feature:313027-313122:-1:exon
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so has part: feature:307290-308927:-1:exon

position:307290:-1
position: 307290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338494-338502:-1:exon

position:338494:-1
position: 338494
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:325256-325333:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:324914-325028:-1:exon

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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:324306-324417:-1:exon

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reference: sequence
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SIO_000300: 5
SIO_000628: feature:323952-324114:-1:exon

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SIO_000300: 6
SIO_000628: feature:322939-323025:-1:exon

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SIO_000300: 7
SIO_000628: feature:322374-322511:-1:exon

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SIO_000300: 8
SIO_000628: feature:321887-321960:-1:exon

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SIO_000628: feature:321374-321450:-1:exon

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SIO_000300: 10
SIO_000628: feature:321107-321255:-1:exon

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SIO_000300: 11
SIO_000628: feature:318991-319118:-1:exon

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SIO_000628: feature:318724-318819:-1:exon

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SIO_000300: 13
SIO_000628: feature:318211-318384:-1:exon

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SIO_000300: 14
SIO_000628: feature:317307-317521:-1:exon

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SIO_000300: 15
SIO_000628: feature:317008-317078:-1:exon

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SIO_000300: 16
SIO_000628: feature:316471-316699:-1:exon

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SIO_000300: 17
SIO_000628: feature:315015-315218:-1:exon

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SIO_000300: 18
SIO_000628: feature:314365-314504:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:313993-314178:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:313027-313122:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:312037-312215:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:311866-311944:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:311499-311578:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:310425-310548:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:309728-309926:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:307290-308927:-1:exon

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016303904.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(307290..308927,309728..309926,310425..310548,311499..311578,311866..311944,312037..312215,313027..313122,313993..314178,314365..314504,315015..315218,316471..316699,317008..317078,317307..317521,318211..318384,318724..318819,318991..319118,321107..321255,321374..321450,321887..321960,322374..322511,322939..323025,323952..324114,324306..324417,324914..325028,325256..325333,327973..328261))
location: region:307290-328261:-1
so has part: feature:327973-328261:-1:exon
so has part: feature:325256-325333:-1:exon
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so has part: feature:321887-321960:-1:exon
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so has part: feature:318991-319118:-1:exon
so has part: feature:318724-318819:-1:exon
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so has part: feature:317008-317078:-1:exon
so has part: feature:316471-316699:-1:exon
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so has part: feature:307290-308927:-1:exon

position:328261:-1
position: 328261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327973-328261:-1:exon

position:327973:-1
position: 327973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325256-325333:-1:exon

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SIO_000300: 3
SIO_000628: feature:324914-325028:-1:exon

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SIO_000628: feature:324306-324417:-1:exon

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SIO_000628: feature:323952-324114:-1:exon

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SIO_000300: 7
SIO_000628: feature:322374-322511:-1:exon

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SIO_000300: 10
SIO_000628: feature:321107-321255:-1:exon

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SIO_000300: 12
SIO_000628: feature:318724-318819:-1:exon

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SIO_000300: 13
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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
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SIO_000628: feature:315015-315218:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:314365-314504:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:313993-314178:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:313027-313122:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:312037-312215:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:311866-311944:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:311499-311578:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:310425-310548:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:309728-309926:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:307290-308927:-1:exon

USP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: USP28
product: ubiquitin specific peptidase 28, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016303908.1
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(307290..308927,309728..309926,310425..310548,311499..311578,311866..311944,312037..312215,314365..314504,315015..315218,316471..316699,317008..317078,317307..317521,318211..318384,318724..318819,318991..319118,321107..321255,321374..321450,321887..321960,322374..322511,322939..323025,323952..324114,324306..324417,324914..325028,325256..325333,327973..328259))
location: region:307290-328259:-1
so has part: feature:327973-328259:-1:exon
so has part: feature:325256-325333:-1:exon
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so has part: feature:309728-309926:-1:exon
so has part: feature:307290-308927:-1:exon

position:328259:-1
position: 328259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327973-328259:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325256-325333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324914-325028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324306-324417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323952-324114:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:321374-321450:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321107-321255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318991-319118:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:318724-318819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:318211-318384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317307-317521:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:317008-317078:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:316471-316699:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:315015-315218:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:314365-314504:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:312037-312215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:311866-311944:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:311499-311578:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:310425-310548:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:309728-309926:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:307290-308927:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X4
translation: MRFREDCQVLLNQMKEITGIQDSAFLLAALKAADGDLMEAVTFLTEDPGPEPVQSPAWEGSTVSKQLPQDVSAAPTPNNQDNLCTANTVRPLESPKTPAAERDAAERAQDAHSAENKNRSKRKRCEVWGENPKENDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPEFRRLVLGYSLPQNVLESCCSHTGKRNIAFMQELQCLFALMLGTWRKFVDPSAALELLRDVFRSAEQPQQDVSEFTHKLLDWLEDAFQLTVNATSPGDKSENPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLTECLEGAMVEGEMDEATASQSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQAMYMDRYLYCNKDLIQMKREEMKRLKEKMVTLQHKLERYMEYGSGPARFPLPDMLQYVLEFIATKPAVSSAQSSQTTLLHSQAKPRVLDVLSQPNGIREKTDTRTEDEAFFVANSSPQQNSSVELQAPVSAAELSECPAPHVVSEEELTLVQTCLQRWRNEIEQDVQDLKESIARINLSIEQMYCDPLLQQVPYRLHAVLVHEGQANAGHYWAFIYDQPRQRWLKYNDIAVTESSWEELERESFGGLRNASAYCLMYISDQVSRAAADEDEGPEAGQFQKEVEALSPELRHYIQEDNWRLEQEAEEWDEEQSCKIPQMEPSPTSELQELSSESGPEQSSVCEQSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCKAFREEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLSEIGPEDVDMEEYKRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVYAYQSNTKLLLKGTNRGVSESLIALYRRKCLLKLNEVAASLFVSCEEAHVSEGVSILNELIIPCMHLMNNFEISKEDLDAIEVMRNRWCSYLGREDMDAKLQMKLGELLPRLLDGSTEVIVLKEPPKIRPNSPYDLCSRFAAVMESIHGASAVTVK
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(308752..308927,309728..309926,310425..310548,311499..311578,311866..311944,312037..312215,314365..314504,315015..315218,316471..316699,317008..317078,317307..317521,318211..318384,318724..318819,318991..319118,321107..321255,321374..321450,321887..321960,322374..322511,322939..323025,323952..324114,324306..324417,324914..325028,325256..325333,327973..327987))
location: region:308752-327987:-1
so has part: feature:327973-327987:-1:exon
so has part: feature:325256-325333:-1:exon
so has part: feature:324914-325028:-1:exon
so has part: feature:324306-324417:-1:exon
so has part: feature:323952-324114:-1:exon
so has part: feature:322939-323025:-1:exon
so has part: feature:322374-322511:-1:exon
so has part: feature:321887-321960:-1:exon
so has part: feature:321374-321450:-1:exon
so has part: feature:321107-321255:-1:exon
so has part: feature:318991-319118:-1:exon
so has part: feature:318724-318819:-1:exon
so has part: feature:318211-318384:-1:exon
so has part: feature:317307-317521:-1:exon
so has part: feature:317008-317078:-1:exon
so has part: feature:316471-316699:-1:exon
so has part: feature:315015-315218:-1:exon
so has part: feature:314365-314504:-1:exon
so has part: feature:312037-312215:-1:exon
so has part: feature:311866-311944:-1:exon
so has part: feature:311499-311578:-1:exon
so has part: feature:310425-310548:-1:exon
so has part: feature:309728-309926:-1:exon
so has part: feature:308752-308927:-1:exon

XP_016159394.1
type: Protein
SIO_000068: ncbiprotein

position:308752:-1
position: 308752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:327987:-1
position: 327987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327973-327987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325256-325333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324914-325028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324306-324417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323952-324114:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322939-323025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322374-322511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321887-321960:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321374-321450:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321107-321255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318991-319118:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:318724-318819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:318211-318384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317307-317521:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:317008-317078:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:316471-316699:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:315015-315218:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:314365-314504:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:312037-312215:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:311866-311944:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:311499-311578:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:310425-310548:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:309728-309926:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:308752-308927:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X1
translation: MRFREDCQVLLNQMKEITGIQDSAFLLAALKAADGDLMEAVTFLTEDPGPEPVQSPAWEGSTVSKQLPQDVSAAPTPNNQDNLCTANTVRPLESPKTPAAERDAAERAQDAHSAENKNRSKRKRCEVWGENPKENDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPEFRRLVLGYSLPQNVLESCCSHTGKRNIAFMQELQCLFALMLGTWRKFVDPSAALELLRDVFRSAEQPQQDVSEFTHKLLDWLEDAFQLTVNATSPGDKSENPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLTECLEGAMVEGEMDEATASQSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQAMYMDRYLYCNKDLIQMKREEMKRLKEKMVTLQHKLERYMEYGSGPARFPLPDMLQYVLEFIATKPAVSSAQSSQTTLLHSQAKPRVLDVLSQPNGIREKTDTRTEDEAFFVANSSPQQNSSVELQAPVSAAELSECPAPHVVSEEELTLVQTCLQRWRNEIEQDVQDLKESIARINLSIEQMYCDPLLQQVPYRLHAVLVHEGQANAGHYWAFIYDQPRQRWLKYNDIAVTESSWEELERESFGGLRNASAYCLMYISDQVSRAAADEDEGPEAGQFQKEVEALSPELRHYIQEDNWRLEQEAEEWDEEQSCKIPQMEPSPTSELQELSSESGPEQSSVCEQSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCKRKEVEPLKAHPEETSPTVQAEQPQDTQEAEAAAQTSSQVSEVEIPSVGKIPVRSDADGYNEEVMLSPAMQGVILAIAKARQTFDRDGSEAGLVKAFREEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLSEIGPEDVDMEEYKRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVYAYQSNTKLLLKGTNRGVSESLIALYRRKCLLKLNEVAASLFVSCEEAHVSEGVSILNELIIPCMHLMNNFEISKEDLDAIEVMRNRWCSYLGREDMDAKLQMKLGELLPRLLDGSTEVIVLKEPPKIRPNSPYDLCSRFAAVMESIHGASAVTVK
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(308752..308927,309728..309926,310425..310548,311499..311578,311866..311944,312037..312215,313027..313122,313993..314178,314365..314504,315015..315218,316471..316699,317008..317078,317307..317521,318211..318384,318724..318819,318991..319118,321107..321255,321374..321450,321887..321960,322374..322511,322939..323025,323952..324114,324306..324417,324914..325028,325256..325333,327973..327987))
location: region:308752-327987:-1
so has part: feature:327973-327987:-1:exon
so has part: feature:325256-325333:-1:exon
so has part: feature:324914-325028:-1:exon
so has part: feature:324306-324417:-1:exon
so has part: feature:323952-324114:-1:exon
so has part: feature:322939-323025:-1:exon
so has part: feature:322374-322511:-1:exon
so has part: feature:321887-321960:-1:exon
so has part: feature:321374-321450:-1:exon
so has part: feature:321107-321255:-1:exon
so has part: feature:318991-319118:-1:exon
so has part: feature:318724-318819:-1:exon
so has part: feature:318211-318384:-1:exon
so has part: feature:317307-317521:-1:exon
so has part: feature:317008-317078:-1:exon
so has part: feature:316471-316699:-1:exon
so has part: feature:315015-315218:-1:exon
so has part: feature:314365-314504:-1:exon
so has part: feature:313993-314178:-1:exon
so has part: feature:313027-313122:-1:exon
so has part: feature:312037-312215:-1:exon
so has part: feature:311866-311944:-1:exon
so has part: feature:311499-311578:-1:exon
so has part: feature:310425-310548:-1:exon
so has part: feature:309728-309926:-1:exon
so has part: feature:308752-308927:-1:exon

XP_016159390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:327973-327987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325256-325333:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324914-325028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:324306-324417:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:323952-324114:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322939-323025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322374-322511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321887-321960:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321374-321450:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321107-321255:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318991-319118:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:318724-318819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:318211-318384:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317307-317521:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:317008-317078:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:316471-316699:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:315015-315218:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:314365-314504:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:313993-314178:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:313027-313122:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:312037-312215:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:311866-311944:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:311499-311578:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:310425-310548:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:309728-309926:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:308752-308927:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X2
translation: MKEITGIQDSAFLLAALKAADGDLMEAVTFLTEDPGPEPVQSPAWEGSTVSKQLPQDVSAAPTPNNQDNLCTANTVRPLESPKTPAAERDAAERAQDAHSAENKNRSKRKRCEVWGENPKENDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPEFRRLVLGYSLPQNVLESCCSHTGKRNIAFMQELQCLFALMLGTWRKFVDPSAALELLRDVFRSAEQPQQDVSEFTHKLLDWLEDAFQLTVNATSPGDKSENPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLTECLEGAMVEGEMDEATASQSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQAMYMDRYLYCNKDLIQMKREEMKRLKEKMVTLQHKLERYMEYGSGPARFPLPDMLQYVLEFIATKPAVSSAQSSQTTLLHSQAKPRVLDVLSQPNGIREKTDTRTEDEAFFVANSSPQQNSSVELQAPVSAAELSECPAPHVVSEEELTLVQTCLQRWRNEIEQDVQDLKESIARINLSIEQMYCDPLLQQVPYRLHAVLVHEGQANAGHYWAFIYDQPRQRWLKYNDIAVTESSWEELERESFGGLRNASAYCLMYISDQVSRAAADEDEGPEAGQFQKEVEALSPELRHYIQEDNWRLEQEAEEWDEEQSCKIPQMEPSPTSELQELSSESGPEQSSVCEQSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCKRKEVEPLKAHPEETSPTVQAEQPQDTQEAEAAAQTSSQVSEVEIPSVGKIPVRSDADGYNEEVMLSPAMQGVILAIAKARQTFDRDGSEAGLVKAFREEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLSEIGPEDVDMEEYKRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVYAYQSNTKLLLKGTNRGVSESLIALYRRKCLLKLNEVAASLFVSCEEAHVSEGVSILNELIIPCMHLMNNFEISKEDLDAIEVMRNRWCSYLGREDMDAKLQMKLGELLPRLLDGSTEVIVLKEPPKIRPNSPYDLCSRFAAVMESIHGASAVTVK
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(308752..308927,309728..309926,310425..310548,311499..311578,311866..311944,312037..312215,313027..313122,313993..314178,314365..314504,315015..315218,316471..316699,317008..317078,317307..317521,318211..318384,318724..318819,318991..319118,321107..321255,321374..321450,321887..321960,322374..322511,322939..323025,323952..324114,324306..324417,324914..325028,325256..325309))
location: region:308752-325309:-1
so has part: feature:325256-325309:-1:exon
so has part: feature:324914-325028:-1:exon
so has part: feature:324306-324417:-1:exon
so has part: feature:323952-324114:-1:exon
so has part: feature:322939-323025:-1:exon
so has part: feature:322374-322511:-1:exon
so has part: feature:321887-321960:-1:exon
so has part: feature:321374-321450:-1:exon
so has part: feature:321107-321255:-1:exon
so has part: feature:318991-319118:-1:exon
so has part: feature:318724-318819:-1:exon
so has part: feature:318211-318384:-1:exon
so has part: feature:317307-317521:-1:exon
so has part: feature:317008-317078:-1:exon
so has part: feature:316471-316699:-1:exon
so has part: feature:315015-315218:-1:exon
so has part: feature:314365-314504:-1:exon
so has part: feature:313993-314178:-1:exon
so has part: feature:313027-313122:-1:exon
so has part: feature:312037-312215:-1:exon
so has part: feature:311866-311944:-1:exon
so has part: feature:311499-311578:-1:exon
so has part: feature:310425-310548:-1:exon
so has part: feature:309728-309926:-1:exon
so has part: feature:308752-308927:-1:exon

XP_016159391.1
type: Protein
SIO_000068: ncbiprotein

position:325309:-1
position: 325309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325256-325309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324914-325028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324306-324417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:323952-324114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322939-323025:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322374-322511:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321887-321960:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:321374-321450:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:321107-321255:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:318991-319118:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:318724-318819:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:318211-318384:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:317307-317521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:317008-317078:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:316471-316699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:315015-315218:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:314365-314504:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:313993-314178:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:313027-313122:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:312037-312215:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:311866-311944:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:311499-311578:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:310425-310548:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:309728-309926:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:308752-308927:-1:exon

USP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: USP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 28 isoform X3
translation: MFAAGGGKLIRMLPPLVDVSAAPTPNNQDNLCTANTVRPLESPKTPAAERDAAERAQDAHSAENKNRSKRKRCEVWGENPKENDWRRAGDWPVGMKNIGNTCWFSAVIQSLFQLPEFRRLVLGYSLPQNVLESCCSHTGKRNIAFMQELQCLFALMLGTWRKFVDPSAALELLRDVFRSAEQPQQDVSEFTHKLLDWLEDAFQLTVNATSPGDKSENPMVQLFYGTFLTEGVHEGNTFSKIETFGQYPLQVNGYRNLTECLEGAMVEGEMDEATASQSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHTKLEFPQAMYMDRYLYCNKDLIQMKREEMKRLKEKMVTLQHKLERYMEYGSGPARFPLPDMLQYVLEFIATKPAVSSAQSSQTTLLHSQAKPRVLDVLSQPNGIREKTDTRTEDEAFFVANSSPQQNSSVELQAPVSAAELSECPAPHVVSEEELTLVQTCLQRWRNEIEQDVQDLKESIARINLSIEQMYCDPLLQQVPYRLHAVLVHEGQANAGHYWAFIYDQPRQRWLKYNDIAVTESSWEELERESFGGLRNASAYCLMYISDQVSRAAADEDEGPEAGQFQKEVEALSPELRHYIQEDNWRLEQEAEEWDEEQSCKIPQMEPSPTSELQELSSESGPEQSSVCEQSVHSLSSEHARIAKEQTAKAIANTADAYEKNGVEAALCKRKEVEPLKAHPEETSPTVQAEQPQDTQEAEAAAQTSSQVSEVEIPSVGKIPVRSDADGYNEEVMLSPAMQGVILAIAKARQTFDRDGSEAGLVKAFREEYSRLYLLSKETPTPQNDARLQHVLIYFLQNNAPQQVVERTLLEQFADKNLSYDERSISIMKVARAKLSEIGPEDVDMEEYKRWHEDYSLFRKVSIYLLTGLELYQNRKYQESLTYLVYAYQSNTKLLLKGTNRGVSESLIALYRRKCLLKLNEVAASLFVSCEEAHVSEGVSILNELIIPCMHLMNNFEISKEDLDAIEVMRNRWCSYLGREDMDAKLQMKLGELLPRLLDGSTEVIVLKEPPKIRPNSPYDLCSRFAAVMESIHGASAVTVK
SIO_010081: USP28
subclass of: SO_0000673
so part of: USP28
location: complement(join(308752..308927,309728..309926,310425..310548,311499..311578,311866..311944,312037..312215,313027..313122,313993..314178,314365..314504,315015..315218,316471..316699,317008..317078,317307..317521,318211..318384,318724..318819,318991..319118,321107..321255,321374..321450,321887..321960,322374..322511,322939..323025,323952..324114,324306..324469))
location: region:308752-324469:-1
so has part: feature:324306-324469:-1:exon
so has part: feature:323952-324114:-1:exon
so has part: feature:322939-323025:-1:exon
so has part: feature:322374-322511:-1:exon
so has part: feature:321887-321960:-1:exon
so has part: feature:321374-321450:-1:exon
so has part: feature:321107-321255:-1:exon
so has part: feature:318991-319118:-1:exon
so has part: feature:318724-318819:-1:exon
so has part: feature:318211-318384:-1:exon
so has part: feature:317307-317521:-1:exon
so has part: feature:317008-317078:-1:exon
so has part: feature:316471-316699:-1:exon
so has part: feature:315015-315218:-1:exon
so has part: feature:314365-314504:-1:exon
so has part: feature:313993-314178:-1:exon
so has part: feature:313027-313122:-1:exon
so has part: feature:312037-312215:-1:exon
so has part: feature:311866-311944:-1:exon
so has part: feature:311499-311578:-1:exon
so has part: feature:310425-310548:-1:exon
so has part: feature:309728-309926:-1:exon
so has part: feature:308752-308927:-1:exon

XP_016159392.1
type: Protein
SIO_000068: ncbiprotein

position:324469:-1
position: 324469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324306-324469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323952-324114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322939-323025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322374-322511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:321887-321960:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:321374-321450:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321107-321255:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:318991-319118:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:318724-318819:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:318211-318384:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:317307-317521:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317008-317078:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:316471-316699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:315015-315218:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:314365-314504:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:313993-314178:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:313027-313122:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:312037-312215:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:311866-311944:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:311499-311578:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:310425-310548:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:309728-309926:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:308752-308927:-1:exon

LOC101812728
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 333796..340189
location: region:333796-340189:1
so has part: feature:333796-340189:1:exon
subclass of: SO_0000010

101812728
type: Gene
SIO_000068: ncbigene

position:333796:1
position: 333796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340189:1
position: 340189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333796-340189:1:exon

LOC101812728
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812728
product: 5-hydroxytryptamine receptor 3A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005058584.1
SIO_010081: LOC101812728
subclass of: SO_0000673
so part of: LOC101812728
location: join(333796..333979,335900..336039,337115..337159,337467..337576,338149..338318,338513..338673,338892..339102,339240..339479,339647..340189)
location: region:333796-340189:1
so has part: feature:333796-333979:1:exon
so has part: feature:335900-336039:1:exon
so has part: feature:337115-337159:1:exon
so has part: feature:337467-337576:1:exon
so has part: feature:338149-338318:1:exon
so has part: feature:338513-338673:1:exon
so has part: feature:338892-339102:1:exon
so has part: feature:339240-339479:1:exon
so has part: feature:339647-340189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:333796-333979:1:exon

position:333979:1
position: 333979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335900-336039:1:exon

position:335900:1
position: 335900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336039:1
position: 336039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337115-337159:1:exon

position:337115:1
position: 337115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337159:1
position: 337159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:337467-337576:1:exon

position:337467:1
position: 337467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337576:1
position: 337576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:338149-338318:1:exon

position:338149:1
position: 338149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338318:1
position: 338318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:338513-338673:1:exon

position:338513:1
position: 338513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338673:1
position: 338673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:338892-339102:1:exon

position:338892:1
position: 338892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339102:1
position: 339102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:339240-339479:1:exon

position:339240:1
position: 339240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339479:1
position: 339479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:339647-340189:1:exon

position:339647:1
position: 339647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101812728
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 3A
translation: MIARLIGRSQKPDGGGKATRVLPTSLLRSVLRRAGASASMVPTALGALLALLPLASALQSPGAQHEPALRRLAQHLLARYQKGTRPVRDWRTTTNVAIDLMVYAILSVDEKNQVLTTYIWYRQHWTDEFLKWDPARFDNLTQISLPVESIWVPDILINEFVDVGKSPHVPYVYVSHHGEVQNLKPIQVMTACSLDIYNFPFDVQNCSLTFTSWLHHIRDINLSLWRQPELVKFDRSVFMNQGEWELLYVLSHFQEFSVKSSDSYAEMKFYVVIRRRPLFYTVSLLLPSIFLMVMDIVGFYLPPHSGERVSFKITLLLGYSVFLIIVSDTLPATAVGTPLIGIYFVVCMALLVISLTETILIVRLVHKQDLQPHVPEWLKHLLLEKATILLCIRDRKKFRPSRMQSLDTSRQVENNDSTGKAKPSPYVCDDPRECEAAGGTRSALAFAGRTEGSAALQEVLREATAIRQLLEKREEFRDVAREWLQVGYVLDILLFRVYLAAVLAYSITLGTLWSVWRDA
SIO_010081: LOC101812728
subclass of: SO_0000673
so part of: LOC101812728
location: join(333796..333979,335900..336039,337115..337159,337467..337576,338149..338318,338513..338673,338892..339102,339240..339479,339647..339945)
location: region:333796-339945:1
so has part: feature:333796-333979:1:exon
so has part: feature:335900-336039:1:exon
so has part: feature:337115-337159:1:exon
so has part: feature:337467-337576:1:exon
so has part: feature:338149-338318:1:exon
so has part: feature:338513-338673:1:exon
so has part: feature:338892-339102:1:exon
so has part: feature:339240-339479:1:exon
so has part: feature:339647-339945:1:exon

XP_005058641.1
type: Protein
SIO_000068: ncbiprotein

position:339945:1
position: 339945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333796-333979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335900-336039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337115-337159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337467-337576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338149-338318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338513-338673:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338892-339102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339240-339479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:339647-339945:1:exon

ZBTB16
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(344469..403550)
location: region:344469-403550:-1
so has part: feature:344469-403550:-1:exon
subclass of: SO_0000010

101813128
type: Gene
SIO_000068: ncbigene

position:344469:-1
position: 344469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403550:-1
position: 403550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344469-403550:-1:exon

ZBTB16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZBTB16
product: zinc finger and BTB domain containing 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005058586.2
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(344469..346479,346755..346922,349032..349202,363177..363263,372780..372877,401873..403550))
location: region:344469-403550:-1
so has part: feature:401873-403550:-1:exon
so has part: feature:372780-372877:-1:exon
so has part: feature:363177-363263:-1:exon
so has part: feature:349032-349202:-1:exon
so has part: feature:346755-346922:-1:exon
so has part: feature:344469-346479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401873-403550:-1:exon

position:401873:-1
position: 401873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:372780-372877:-1:exon

position:372780:-1
position: 372780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372877:-1
position: 372877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:363177-363263:-1:exon

position:363177:-1
position: 363177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363263:-1
position: 363263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:349032-349202:-1:exon

position:349032:-1
position: 349032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349202:-1
position: 349202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:346755-346922:-1:exon

position:346755:-1
position: 346755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346922:-1
position: 346922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:344469-346479:-1:exon

position:346479:-1
position: 346479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZBTB16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 16
translation: MDLTKMGLIQLQNPCHPTGLLHKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRNSQHYTLDFLSPKTFQQILEYAYTATLQAKVEDLDDLLYAAEILEIEYLEEQCLKILETIQASEDNDTEVAMADGGAAATTEEEEEKKSRYIKGLFISKPSGEEGAYAGMASQSLLAATVEQSPSASASYCSLSSMSPTKAAVDSLMTIGQSLLQGSLPPSAPEDARSATTRRPSGLTEVKTEAMHVDEASSHDSPRTAESGASSGEKPDEKGKEGPGTPTRSSVITSARELHYSREEGAEPPPEPGQGLPLGPEPSAAAPGEKPLGIYSLLPNHKTEPVLGVPPTAAAALHVQPALAVSMDFSAYGGLLPQGFIQRELFSKLGELAAGMKTESRALGEQCSVCGAELPDNETLEQHRKLHSGMKTYGCELCGKRFLDSLRLRMHLLAHSAGAKALVCDQCGAQFSKEDALETHRQTHTGTDMAVFCLLCGKRFQTQSALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPYECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKLCHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHMKGHKPEEIPTDWRIEKTYLYLCYV
SIO_010081: ZBTB16
subclass of: SO_0000673
so part of: ZBTB16
location: complement(join(346250..346479,346755..346922,349032..349202,363177..363263,372780..372877,401873..403140))
location: region:346250-403140:-1
so has part: feature:401873-403140:-1:exon
so has part: feature:372780-372877:-1:exon
so has part: feature:363177-363263:-1:exon
so has part: feature:349032-349202:-1:exon
so has part: feature:346755-346922:-1:exon
so has part: feature:346250-346479:-1:exon

XP_005058643.1
type: Protein
SIO_000068: ncbiprotein

position:346250:-1
position: 346250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403140:-1
position: 403140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401873-403140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:372780-372877:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:363177-363263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:349032-349202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346755-346922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346250-346479:-1:exon

RBM7
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RBM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 423201..426840
location: region:423201-426840:1
so has part: feature:423201-426840:1:exon
subclass of: SO_0000010

101814117
type: Gene
SIO_000068: ncbigene

position:423201:1
position: 423201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426840:1
position: 426840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423201-426840:1:exon

RBM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RBM7
product: RNA binding motif protein 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303811.1
SIO_010081: RBM7
subclass of: SO_0000673
so part of: RBM7
location: join(423201..423404,423875..424037,424559..424661,424852..424918,425142..425282,425921..426840)
location: region:423201-426840:1
so has part: feature:423201-423404:1:exon
so has part: feature:423875-424037:1:exon
so has part: feature:424559-424661:1:exon
so has part: feature:424852-424918:1:exon
so has part: feature:425142-425282:1:exon
so has part: feature:425921-426840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:423201-423404:1:exon

position:423404:1
position: 423404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:423875-424037:1:exon

position:423875:1
position: 423875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424037:1
position: 424037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424559-424661:1:exon

position:424559:1
position: 424559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424661:1
position: 424661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:424852-424918:1:exon

position:424852:1
position: 424852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424918:1
position: 424918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:425142-425282:1:exon

position:425142:1
position: 425142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425282:1
position: 425282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:425921-426840:1:exon

position:425921:1
position: 425921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RBM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 7
translation: MPIAPFPFPLPRSHCHCPVPVPVPIPPFPCPLPHWARGAAAAEANRTLFVGNLDPKVTEELIFELFHQAGPVITVKIPKDRDGRPKQFAFVNFKHEESVPYGLRLLNGIKLYGRPMRIQFRSGSSHAAQDINPSCSQLGAAGTSPPGMPHPAANCSRYERVPDGMASPGFQSSLQRQAVMNSAARQQPQFGGKYEQGFAPAGFPHPFHALPGSPGPRRPEGPAPRKPPLGGHPYAPDGRHPGRAKRDEYGFEERHEAEQHYRGGREEHYDDRHRDGWSYEYRRDSYREARWHSARH
SIO_010081: RBM7
subclass of: SO_0000673
so part of: RBM7
location: join(423201..423404,423875..424037,424559..424661,424852..424918,425142..425282,425921..426133)
location: region:423201-426133:1
so has part: feature:423201-423404:1:exon
so has part: feature:423875-424037:1:exon
so has part: feature:424559-424661:1:exon
so has part: feature:424852-424918:1:exon
so has part: feature:425142-425282:1:exon
so has part: feature:425921-426133:1:exon

XP_016159297.1
type: Protein
SIO_000068: ncbiprotein

position:426133:1
position: 426133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423201-423404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:423875-424037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424559-424661:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424852-424918:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425142-425282:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425921-426133:1:exon

REXO2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: REXO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 427697..432281
location: region:427697-432281:1
so has part: feature:427697-432281:1:exon
subclass of: SO_0000010

101813311
type: Gene
SIO_000068: ncbigene

position:427697:1
position: 427697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432281:1
position: 432281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427697-432281:1:exon

REXO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: REXO2
product: RNA exonuclease 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005058587.2
SIO_010081: REXO2
subclass of: SO_0000673
so part of: REXO2
location: join(427697..427811,428076..428153,429954..430065,430632..430740,430951..431004,431862..432281)
location: region:427697-432281:1
so has part: feature:427697-427811:1:exon
so has part: feature:428076-428153:1:exon
so has part: feature:429954-430065:1:exon
so has part: feature:430632-430740:1:exon
so has part: feature:430951-431004:1:exon
so has part: feature:431862-432281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427697-427811:1:exon

position:427811:1
position: 427811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428076-428153:1:exon

position:428076:1
position: 428076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428153:1
position: 428153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:429954-430065:1:exon

position:429954:1
position: 429954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430065:1
position: 430065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:430632-430740:1:exon

position:430632:1
position: 430632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430740:1
position: 430740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:430951-431004:1:exon

position:430951:1
position: 430951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431004:1
position: 431004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431862-432281:1:exon

position:431862:1
position: 431862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

REXO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: REXO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: oligoribonuclease, mitochondrial
translation: MTGLDVEKDQILEMACLITDCDLNVLAEGPNLIINQPDELLESMSEWCKEHHGKSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKYMPQFMRHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDIRESIKELQFYRDHIFKRKTDEKKRKLIENGESDKAAS
SIO_010081: REXO2
subclass of: SO_0000673
so part of: REXO2
location: join(427728..427811,428076..428153,429954..430065,430632..430740,430951..431004,431862..431991)
location: region:427728-431991:1
so has part: feature:427728-427811:1:exon
so has part: feature:428076-428153:1:exon
so has part: feature:429954-430065:1:exon
so has part: feature:430632-430740:1:exon
so has part: feature:430951-431004:1:exon
so has part: feature:431862-431991:1:exon

XP_005058644.1
type: Protein
SIO_000068: ncbiprotein

position:427728:1
position: 427728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431991:1
position: 431991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427728-427811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428076-428153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429954-430065:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430632-430740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:430951-431004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431862-431991:1:exon

CADM1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(497222..641926)
location: region:497222-641926:-1
so has part: feature:497222-641926:-1:exon
subclass of: SO_0000010

101814309
type: Gene
SIO_000068: ncbigene

position:497222:-1
position: 497222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641926:-1
position: 641926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497222-641926:-1:exon

CADM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CADM1
product: cell adhesion molecule 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005058592.1
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(497222..497562,497746..497877,505227..505307,507894..507947,512948..512980,526223..526294,529869..530041,532801..532900,540529..540684,542326..542463,544832..544984,545879..546025,604839..604935,630184..630254,641596..641926))
location: region:497222-641926:-1
so has part: feature:641596-641926:-1:exon
so has part: feature:630184-630254:-1:exon
so has part: feature:604839-604935:-1:exon
so has part: feature:545879-546025:-1:exon
so has part: feature:544832-544984:-1:exon
so has part: feature:542326-542463:-1:exon
so has part: feature:540529-540684:-1:exon
so has part: feature:532801-532900:-1:exon
so has part: feature:529869-530041:-1:exon
so has part: feature:526223-526294:-1:exon
so has part: feature:512948-512980:-1:exon
so has part: feature:507894-507947:-1:exon
so has part: feature:505227-505307:-1:exon
so has part: feature:497746-497877:-1:exon
so has part: feature:497222-497562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641596-641926:-1:exon

position:641596:-1
position: 641596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:630184-630254:-1:exon

position:630184:-1
position: 630184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:630254:-1
position: 630254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:604839-604935:-1:exon

position:604839:-1
position: 604839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604935:-1
position: 604935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:545879-546025:-1:exon

position:545879:-1
position: 545879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546025:-1
position: 546025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:544832-544984:-1:exon

position:544832:-1
position: 544832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544984:-1
position: 544984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542326-542463:-1:exon

position:542326:-1
position: 542326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542463:-1
position: 542463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:540529-540684:-1:exon

position:540529:-1
position: 540529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540684:-1
position: 540684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:532801-532900:-1:exon

position:532801:-1
position: 532801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532900:-1
position: 532900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:529869-530041:-1:exon

position:529869:-1
position: 529869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530041:-1
position: 530041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:526223-526294:-1:exon

position:526223:-1
position: 526223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526294:-1
position: 526294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:512948-512980:-1:exon

position:512948:-1
position: 512948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512980:-1
position: 512980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:507894-507947:-1:exon

position:507894:-1
position: 507894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507947:-1
position: 507947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:505227-505307:-1:exon

position:505227:-1
position: 505227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505307:-1
position: 505307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:497746-497877:-1:exon

position:497746:-1
position: 497746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497877:-1
position: 497877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:497222-497562:-1:exon

position:497562:-1
position: 497562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CADM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 1
translation: MVGVDSRDGHCQDPPGTVLLPVQRWLQWQEAGGAAAPGTPGPCADAALPPPLFALRCLCWCVNKGGFVIQQRWLAAGAWRALPRPCQRSGPCPAIVSVPWVSSLPHCRLEMGSKVILLCFSQEELAQIGSFSVPVSELVWRWDLQAGVWFGLGQRIRQLSARRCSISDGQNLVTEDVTVVEGDVATISCRVKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQLYTDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKELTGKSEVERWSDMYTVTSQLLLRVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVRVSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKTDNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVHGFTQLPNSAEELDYGDLSGTSVPPTASGEALPTEPLSNASLASRPDSRAGEEGAIRSVDHAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
SIO_010081: CADM1
subclass of: SO_0000673
so part of: CADM1
location: complement(join(497444..497562,497746..497877,505227..505307,507894..507947,512948..512980,526223..526294,529869..530041,532801..532900,540529..540684,542326..542463,544832..544984,545879..546025,604839..604935,630184..630254,641596..641926))
location: region:497444-641926:-1
so has part: feature:641596-641926:-1:exon
so has part: feature:630184-630254:-1:exon
so has part: feature:604839-604935:-1:exon
so has part: feature:545879-546025:-1:exon
so has part: feature:544832-544984:-1:exon
so has part: feature:542326-542463:-1:exon
so has part: feature:540529-540684:-1:exon
so has part: feature:532801-532900:-1:exon
so has part: feature:529869-530041:-1:exon
so has part: feature:526223-526294:-1:exon
so has part: feature:512948-512980:-1:exon
so has part: feature:507894-507947:-1:exon
so has part: feature:505227-505307:-1:exon
so has part: feature:497746-497877:-1:exon
so has part: feature:497444-497562:-1:exon

XP_005058649.1
type: Protein
SIO_000068: ncbiprotein

position:497444:-1
position: 497444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641596-641926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:630184-630254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:604839-604935:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545879-546025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544832-544984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542326-542463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540529-540684:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:532801-532900:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529869-530041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526223-526294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512948-512980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:507894-507947:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505227-505307:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:497746-497877:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:497444-497562:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 728617..733616
location: region:728617-733616:1
so has part: feature:728617-733616:1:region

position:728617:1
position: 728617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733616:1
position: 733616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728617-733616:1:region

BUD13
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BUD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(901864..905983)
location: region:901864-905983:-1
so has part: feature:901864-905983:-1:exon
subclass of: SO_0000010

101820895
type: Gene
SIO_000068: ncbigene

position:901864:-1
position: 901864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905983:-1
position: 905983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:901864-905983:-1:exon

BUD13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BUD13
product: BUD13 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016303947.1
SIO_010081: BUD13
subclass of: SO_0000673
so part of: BUD13
location: complement(join(901864..902027,902247..902328,902674..902855,903117..903255,903653..903761,903922..903986,904115..904755,904812..904859,905257..905308,905462..905546,905894..905983))
location: region:901864-905983:-1
so has part: feature:905894-905983:-1:exon
so has part: feature:905462-905546:-1:exon
so has part: feature:905257-905308:-1:exon
so has part: feature:904812-904859:-1:exon
so has part: feature:904115-904755:-1:exon
so has part: feature:903922-903986:-1:exon
so has part: feature:903653-903761:-1:exon
so has part: feature:903117-903255:-1:exon
so has part: feature:902674-902855:-1:exon
so has part: feature:902247-902328:-1:exon
so has part: feature:901864-902027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905894-905983:-1:exon

position:905894:-1
position: 905894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:905462-905546:-1:exon

position:905462:-1
position: 905462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905546:-1
position: 905546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:905257-905308:-1:exon

position:905257:-1
position: 905257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:905308:-1
position: 905308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:904812-904859:-1:exon

position:904812:-1
position: 904812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904859:-1
position: 904859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:904115-904755:-1:exon

position:904115:-1
position: 904115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904755:-1
position: 904755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:903922-903986:-1:exon

position:903922:-1
position: 903922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903986:-1
position: 903986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:903653-903761:-1:exon

position:903653:-1
position: 903653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903761:-1
position: 903761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:903117-903255:-1:exon

position:903117:-1
position: 903117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903255:-1
position: 903255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:902674-902855:-1:exon

position:902674:-1
position: 902674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902855:-1
position: 902855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:902247-902328:-1:exon

position:902247:-1
position: 902247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902328:-1
position: 902328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:901864-902027:-1:exon

position:902027:-1
position: 902027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BUD13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BUD13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BUD13 homolog
translation: MRIVDDDVSWNSIAAAPEKEEEEDEGDMPVVAEFIDERPEEVKLMEEFRTNSKWKLLGDKDSQSSDISGSAKSATRRRHDSPEAAGKHNGSFDPSPPRRHRHDTPDPSPPRRQRHDTPDPSPPRRHRHDTPDPSPPRRQRHDTPDPSPPRRHRHDTPDPSPPRRQRHDTPDPSPPRRHRHDTPDLSPPRRQRHDTPDSSPPKRQRRDTPDLSPPRRRQRHDTPDPSSPRKQRHDMPDLSPPRRQRHDTPDLSPPRRRQRHDTPDPSPPRRRRPGTPDLSPPRRHQDVSPQREKPGSPSGKKSRRKGRTSPSQKEQHRSRSPPGSPKKANTMSSGAKAGLVSADVLQREKQELRKHERSTKHLEEESRNAQTVFRDKSGRKRNLAQEQLEQRLKAEAEAKREEQYAKWGKGLAQERQQQQNVEDAVKEMQKPLARYIDDQDLDRMLREQEREGDPMAALIKKRKAKENKEKEKPRYKGPAPPLNRFNIWPGHRWDGVDRSNGFEQQRFARIANKKAVQELAYKWSVEDM
SIO_010081: BUD13
subclass of: SO_0000673
so part of: BUD13
location: complement(join(901934..902027,902247..902328,902674..902855,903117..903255,903653..903761,903922..903986,904115..904755,904812..904859,905257..905308,905462..905546,905894..905983))
location: region:901934-905983:-1
so has part: feature:905894-905983:-1:exon
so has part: feature:905462-905546:-1:exon
so has part: feature:905257-905308:-1:exon
so has part: feature:904812-904859:-1:exon
so has part: feature:904115-904755:-1:exon
so has part: feature:903922-903986:-1:exon
so has part: feature:903653-903761:-1:exon
so has part: feature:903117-903255:-1:exon
so has part: feature:902674-902855:-1:exon
so has part: feature:902247-902328:-1:exon
so has part: feature:901934-902027:-1:exon

XP_016159433.1
type: Protein
SIO_000068: ncbiprotein

position:901934:-1
position: 901934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905894-905983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:905462-905546:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905257-905308:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:904812-904859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:904115-904755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:903922-903986:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903653-903761:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903117-903255:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:902674-902855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:902247-902328:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:901934-902027:-1:exon

ZPR1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ZPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(907433..>911066)
location: region:907433-911066:-1
so has part: feature:907433-911066:-1:exon
subclass of: SO_0000010

101821089
type: Gene
SIO_000068: ncbigene

position:907433:-1
position: 907433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911066:-1
position: 911066
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907433-911066:-1:exon

ZPR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZPR1
product: ZPR1 zinc finger
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016303846.1
SIO_010081: ZPR1
subclass of: SO_0000673
so part of: ZPR1
location: complement(join(907433..907746,907962..908027,908121..908207,908312..908422,908526..908615,908863..908933,909140..909206,909293..909346,909415..909537,909614..909700,909928..909998,910090..910180,910330..910491,910950..>911066))
location: region:907433-911066:-1
so has part: feature:910950-911066:-1:exon
so has part: feature:910330-910491:-1:exon
so has part: feature:910090-910180:-1:exon
so has part: feature:909928-909998:-1:exon
so has part: feature:909614-909700:-1:exon
so has part: feature:909415-909537:-1:exon
so has part: feature:909293-909346:-1:exon
so has part: feature:909140-909206:-1:exon
so has part: feature:908863-908933:-1:exon
so has part: feature:908526-908615:-1:exon
so has part: feature:908312-908422:-1:exon
so has part: feature:908121-908207:-1:exon
so has part: feature:907962-908027:-1:exon
so has part: feature:907433-907746:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910950-911066:-1:exon

position:910950:-1
position: 910950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:910330-910491:-1:exon

position:910330:-1
position: 910330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910491:-1
position: 910491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:910090-910180:-1:exon

position:910090:-1
position: 910090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910180:-1
position: 910180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:909928-909998:-1:exon

position:909928:-1
position: 909928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909998:-1
position: 909998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:909614-909700:-1:exon

position:909614:-1
position: 909614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909700:-1
position: 909700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:909415-909537:-1:exon

position:909415:-1
position: 909415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909537:-1
position: 909537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:909293-909346:-1:exon

position:909293:-1
position: 909293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909346:-1
position: 909346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:909140-909206:-1:exon

position:909140:-1
position: 909140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909206:-1
position: 909206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:908863-908933:-1:exon

position:908863:-1
position: 908863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908933:-1
position: 908933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:908526-908615:-1:exon

position:908526:-1
position: 908526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908615:-1
position: 908615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:908312-908422:-1:exon

position:908312:-1
position: 908312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908422:-1
position: 908422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:908121-908207:-1:exon

position:908121:-1
position: 908121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908207:-1
position: 908207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:907962-908027:-1:exon

position:907962:-1
position: 907962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908027:-1
position: 908027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:907433-907746:-1:exon

position:907746:-1
position: 907746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZPR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZPR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZPR1
translation: PPPPPPPGPAEALFRPLSAEDGEQQPAEIESLCMNCFRNGVTRLLLTRIPFFKEIIVSSFSCASCSWSNTEIQSAGRIQEQGVRYTLAVTSRQDMNREVVKTDCASARIPELDFEIPAFSQKGVLTTIEGIIDRAVAGLEQDQPARRVMDKEVARKIDEFIGKLRQLKEVNSPFTFILDDPSGNSFVENPCAPQRDEALVVTHYRRSPQQAAVLGLEGEEVDAKLPDAAEDLRDEVLQFNTNCPECNAPASTNMKLVQIPHFKEVIIMATNCDSCGHRTNEVKSGGAIEAQGTRITLRITDPSDMTRDILKSETCSVEIPELEFELGMGALGGKFTTLEGLLKDIRDLVEKNPFTLGDSSTPSRTGKLQEFIGKLQDIIEGKAQAHFIMDDPAGNSYLQNVYAPDEDPELRVQRYERTFEQNEELGLNDMKTEGYEPEAASGR
SIO_010081: ZPR1
subclass of: SO_0000673
so part of: ZPR1
location: complement(join(907612..907746,907962..908027,908121..908207,908312..908422,908526..908615,908863..908933,909140..909206,909293..909346,909415..909537,909614..909700,909928..909998,910090..910180,910330..910491,910950..>911066))
location: region:907612-911066:-1
so has part: feature:910950-911066:-1:exon
so has part: feature:910330-910491:-1:exon
so has part: feature:910090-910180:-1:exon
so has part: feature:909928-909998:-1:exon
so has part: feature:909614-909700:-1:exon
so has part: feature:909415-909537:-1:exon
so has part: feature:909293-909346:-1:exon
so has part: feature:909140-909206:-1:exon
so has part: feature:908863-908933:-1:exon
so has part: feature:908526-908615:-1:exon
so has part: feature:908312-908422:-1:exon
so has part: feature:908121-908207:-1:exon
so has part: feature:907962-908027:-1:exon
so has part: feature:907612-907746:-1:exon

XP_016159332.1
type: Protein
SIO_000068: ncbiprotein

position:907612:-1
position: 907612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910950-911066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910330-910491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910090-910180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:909928-909998:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:909614-909700:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:909415-909537:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:909293-909346:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:909140-909206:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:908863-908933:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:908526-908615:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:908312-908422:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:908121-908207:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:907962-908027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:907612-907746:-1:exon

APOA5
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<911578..913059)
location: region:911578-913059:-1
so has part: feature:911578-913059:-1:exon
subclass of: SO_0000010

107604164
type: Gene
SIO_000068: ncbigene

position:911578:-1
position: 911578
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:913059:-1
position: 913059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911578-913059:-1:exon

APOA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: APOA5
product: apolipoprotein A-V
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303813.1
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(<911578..911754,911810..912458,912613..912721,912801..913059))
location: region:911578-913059:-1
so has part: feature:912801-913059:-1:exon
so has part: feature:912613-912721:-1:exon
so has part: feature:911810-912458:-1:exon
so has part: feature:911578-911754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:912801-913059:-1:exon

position:912801:-1
position: 912801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:912613-912721:-1:exon

position:912613:-1
position: 912613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912721:-1
position: 912721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:911810-912458:-1:exon

position:911810:-1
position: 911810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912458:-1
position: 912458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:911578-911754:-1:exon

position:911754:-1
position: 911754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: APOA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-V
translation: MLLKAALLLSLLASCPVSPAKPEQSGLWEYLSQLTGDKDGLEQGQSKLGRDITNLKESIQDGVSYMGDFLEKLSPLSRRLQPRLPEDSASLRRALRRELDSLRDKLSPYVDEVHQQVGKQLDDLRQQLQPLTEELPPPPPQLQPLTEELLDQVSLRARQLRRHLVPSREVTAQLLGGADELQRFMAHYADKIAFHTDQVKDIFHPYTDRLLSEIHRNVEELHRSVAPHARASPEQLNQHIQELSAKLARNARDLHQQIQKNLEQLKAKLPLSLLPRSLGAPPGRSREALAREVQRRVEEFRRDTYAQIQAFTRALDQETEEMRLKPPP
SIO_010081: APOA5
subclass of: SO_0000673
so part of: APOA5
location: complement(join(<911578..911754,911810..912458,912613..912721,912801..912849))
location: region:911578-912849:-1
so has part: feature:912801-912849:-1:exon
so has part: feature:912613-912721:-1:exon
so has part: feature:911810-912458:-1:exon
so has part: feature:911578-911754:-1:exon

XP_016159299.1
type: Protein
SIO_000068: ncbiprotein

position:912849:-1
position: 912849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912801-912849:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912613-912721:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911810-912458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911578-911754:-1:exon

APOA4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: APOA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(913938..916271)
location: region:913938-916271:-1
so has part: feature:913938-916271:-1:exon
subclass of: SO_0000010

101814826
type: Gene
SIO_000068: ncbigene

position:913938:-1
position: 913938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916271:-1
position: 916271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913938-916271:-1:exon

APOA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: APOA4
product: apolipoprotein A-IV
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005058596.2
SIO_010081: APOA4
subclass of: SO_0000673
so part of: APOA4
location: complement(join(913938..915153,915191..915238,915350..915476,915600..915666,915789..916271))
location: region:913938-916271:-1
so has part: feature:915789-916271:-1:exon
so has part: feature:915600-915666:-1:exon
so has part: feature:915350-915476:-1:exon
so has part: feature:915191-915238:-1:exon
so has part: feature:913938-915153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:915789-916271:-1:exon

position:915789:-1
position: 915789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:915600-915666:-1:exon

position:915600:-1
position: 915600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915666:-1
position: 915666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:915350-915476:-1:exon

position:915350:-1
position: 915350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915476:-1
position: 915476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:915191-915238:-1:exon

position:915191:-1
position: 915191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915238:-1
position: 915238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:913938-915153:-1:exon

position:915153:-1
position: 915153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: APOA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-IV
translation: MAPKAAALVLVLLAISGSRADVNPDDVANVIWKYFTELGSNAKDTVGQLQQTEISKQLNTLLKSNLQTVSAYAEDLQERLVPFATELQARLAQDSQRMKEQIQRELRELQAKLAPYADEVHQQIGTNIRELQAKLSPYAEELRSQVDRSAGELQRALEPYAAELRERLQDNTDSIKASLSPYADRLQQQIDGGVESLKERLSPMADELKAQVEQSVAELRRGLSPYAQEVQDGLNRQLESLTLQMERAAEELRGRLATSSEELRAQLSPLARELREAASGDAESLRQRLAPLAQQLEQRVGQTLESFRQQAAPFGETFGKQLVQRLEEMRGKLETGAAGVEDHLELLEKEVREKVAAFLSTVPPPQN
SIO_010081: APOA4
subclass of: SO_0000673
so part of: APOA4
location: complement(join(914274..915153,915191..915238,915350..915476,915600..915648))
location: region:914274-915648:-1
so has part: feature:915600-915648:-1:exon
so has part: feature:915350-915476:-1:exon
so has part: feature:915191-915238:-1:exon
so has part: feature:914274-915153:-1:exon

XP_005058653.1
type: Protein
SIO_000068: ncbiprotein

position:914274:-1
position: 914274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915648:-1
position: 915648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915600-915648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:915350-915476:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:915191-915238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:914274-915153:-1:exon

LOC107604165
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 916085..918392
location: region:916085-918392:1
so has part: feature:916085-918392:1:exon
subclass of: SO_0000010

107604165
type: Gene
SIO_000068: ncbigene

position:916085:1
position: 916085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918392:1
position: 918392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:916085-918392:1:exon

LOC107604165
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604165
product: uncharacterized LOC107604165
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303814.1
SIO_010081: LOC107604165
subclass of: SO_0000673
so part of: LOC107604165
location: join(916085..916113,916270..916934,917039..917145,918321..918392)
location: region:916085-918392:1
so has part: feature:916085-916113:1:exon
so has part: feature:916270-916934:1:exon
so has part: feature:917039-917145:1:exon
so has part: feature:918321-918392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:916085-916113:1:exon

position:916113:1
position: 916113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:916270-916934:1:exon

position:916270:1
position: 916270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916934:1
position: 916934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:917039-917145:1:exon

position:917039:1
position: 917039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917145:1
position: 917145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918321-918392:1:exon

position:918321:1
position: 918321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107604165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604165
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107604165
translation: MAPQCWQCSTWGAHEAVHRQDGIVPSRSRLLEEALAQEGAGHCRALQPQGACEWSWDPACPCPWASGSQHTPGRGQPPAQPTPAPGTAEQRRCVTAGKGHGGQGQGPARQRQWQGPRRLAVPEGVVPRDRAAGCHPCAVCAQGCALPRAAGWLRTRVCTQPGVNSDVRAHTQTRGAPQAPSPRDFPTPGWTQRPCSPPAPCPDLCTNPPGGPWGSYKEGAQGWPRLTEPGAAMKASLLFLLACTAVLAVGASKGQGATQEEGVGALGFLRVPQHPQLRAPLAPSSIHCKD
SIO_010081: LOC107604165
subclass of: SO_0000673
so part of: LOC107604165
location: join(916085..916113,916270..916934,917039..917145,918321..918392)
location: region:916085-918392:1
so has part: feature:916085-916113:1:exon
so has part: feature:916270-916934:1:exon
so has part: feature:917039-917145:1:exon
so has part: feature:918321-918392:1:exon

XP_016159300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:916085-916113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:916270-916934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:917039-917145:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918321-918392:1:exon

APOA1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: APOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(918535..919950)
location: region:918535-919950:-1
so has part: feature:918535-919950:-1:exon
subclass of: SO_0000010

101814498
type: Gene
SIO_000068: ncbigene

position:918535:-1
position: 918535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919950:-1
position: 919950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918535-919950:-1:exon

APOA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: APOA1
product: apolipoprotein A-I
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005058594.2
SIO_010081: APOA1
subclass of: SO_0000673
so part of: APOA1
location: complement(join(918535..919228,919304..919457,919684..919739,919897..919950))
location: region:918535-919950:-1
so has part: feature:919897-919950:-1:exon
so has part: feature:919684-919739:-1:exon
so has part: feature:919304-919457:-1:exon
so has part: feature:918535-919228:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:919897-919950:-1:exon

position:919897:-1
position: 919897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919684-919739:-1:exon

position:919684:-1
position: 919684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919739:-1
position: 919739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:919304-919457:-1:exon

position:919304:-1
position: 919304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919457:-1
position: 919457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918535-919228:-1:exon

position:919228:-1
position: 919228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: APOA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein A-I
translation: MRAVVLTLALLCLTGTQARSFWQQDEPQAPLDRLKDMLDVYLETVKASGKEAIAQFEASTVGKQLDLKLGENLDTLGAAAAKLREDVAPYYKEVREMWLKDTEALRKELSKDLEEVKEKIKPFLDQFSAKWTEDLEQYRQRLAPLAQELKELSKQKVELLQQKLTPVAEEARDRLRGHVEELRKNVAPFSDELRQKLSQKLEEIREKGIPQAAEYQAKVVEQLSNLREKMTPLMQDFKERLTPYTETLKARFLSLLEDLQKTVA
SIO_010081: APOA1
subclass of: SO_0000673
so part of: APOA1
location: complement(join(918631..919228,919304..919457,919684..919726))
location: region:918631-919726:-1
so has part: feature:919684-919726:-1:exon
so has part: feature:919304-919457:-1:exon
so has part: feature:918631-919228:-1:exon

XP_005058651.1
type: Protein
SIO_000068: ncbiprotein

position:918631:-1
position: 918631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919726:-1
position: 919726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919684-919726:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:919304-919457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918631-919228:-1:exon

SIK3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(921529..997805)
location: region:921529-997805:-1
so has part: feature:921529-997805:-1:exon
subclass of: SO_0000010

101821284
type: Gene
SIO_000068: ncbigene

position:921529:-1
position: 921529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997805:-1
position: 997805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921529-997805:-1:exon

SIK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SIK3
product: SIK family kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303815.1
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(921529..923199,923474..923641,923736..923868,924567..924727,931582..932459,932677..933037,933612..933721,934384..934469,934782..934907,935625..935775,938390..938533,941472..941542,942026..942079,942636..942701,943326..943479,943912..944021,944129..944206,944736..944879,945058..945168,945506..945624,947680..947803,948053..948177,953795..953956,959445..959508,960710..960826,997718..997805))
location: region:921529-997805:-1
so has part: feature:997718-997805:-1:exon
so has part: feature:960710-960826:-1:exon
so has part: feature:959445-959508:-1:exon
so has part: feature:953795-953956:-1:exon
so has part: feature:948053-948177:-1:exon
so has part: feature:947680-947803:-1:exon
so has part: feature:945506-945624:-1:exon
so has part: feature:945058-945168:-1:exon
so has part: feature:944736-944879:-1:exon
so has part: feature:944129-944206:-1:exon
so has part: feature:943912-944021:-1:exon
so has part: feature:943326-943479:-1:exon
so has part: feature:942636-942701:-1:exon
so has part: feature:942026-942079:-1:exon
so has part: feature:941472-941542:-1:exon
so has part: feature:938390-938533:-1:exon
so has part: feature:935625-935775:-1:exon
so has part: feature:934782-934907:-1:exon
so has part: feature:934384-934469:-1:exon
so has part: feature:933612-933721:-1:exon
so has part: feature:932677-933037:-1:exon
so has part: feature:931582-932459:-1:exon
so has part: feature:924567-924727:-1:exon
so has part: feature:923736-923868:-1:exon
so has part: feature:923474-923641:-1:exon
so has part: feature:921529-923199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997718-997805:-1:exon

position:997718:-1
position: 997718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:960710-960826:-1:exon

position:960710:-1
position: 960710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960826:-1
position: 960826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:959445-959508:-1:exon

position:959445:-1
position: 959445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959508:-1
position: 959508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:953795-953956:-1:exon

position:953795:-1
position: 953795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953956:-1
position: 953956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:948053-948177:-1:exon

position:948053:-1
position: 948053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948177:-1
position: 948177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:947680-947803:-1:exon

position:947680:-1
position: 947680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947803:-1
position: 947803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:945506-945624:-1:exon

position:945506:-1
position: 945506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945624:-1
position: 945624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:945058-945168:-1:exon

position:945058:-1
position: 945058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945168:-1
position: 945168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:944736-944879:-1:exon

position:944736:-1
position: 944736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944879:-1
position: 944879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:944129-944206:-1:exon

position:944129:-1
position: 944129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944206:-1
position: 944206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:943912-944021:-1:exon

position:943912:-1
position: 943912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944021:-1
position: 944021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:943326-943479:-1:exon

position:943326:-1
position: 943326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943479:-1
position: 943479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:942636-942701:-1:exon

position:942636:-1
position: 942636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942701:-1
position: 942701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:942026-942079:-1:exon

position:942026:-1
position: 942026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942079:-1
position: 942079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:941472-941542:-1:exon

position:941472:-1
position: 941472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941542:-1
position: 941542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:938390-938533:-1:exon

position:938390:-1
position: 938390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938533:-1
position: 938533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:935625-935775:-1:exon

position:935625:-1
position: 935625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935775:-1
position: 935775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:934782-934907:-1:exon

position:934782:-1
position: 934782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934907:-1
position: 934907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:934384-934469:-1:exon

position:934384:-1
position: 934384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934469:-1
position: 934469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:933612-933721:-1:exon

position:933612:-1
position: 933612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933721:-1
position: 933721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:932677-933037:-1:exon

position:932677:-1
position: 932677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933037:-1
position: 933037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:931582-932459:-1:exon

position:931582:-1
position: 931582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932459:-1
position: 932459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:924567-924727:-1:exon

position:924567:-1
position: 924567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:924727:-1
position: 924727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:923736-923868:-1:exon

position:923736:-1
position: 923736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923868:-1
position: 923868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:923474-923641:-1:exon

position:923474:-1
position: 923474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923641:-1
position: 923641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:921529-923199:-1:exon

position:923199:-1
position: 923199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SIK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SIK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK3
translation: MKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVAAVNFCHCRNIVHRDLKAENLLLDANLNIKIADFGFSNIFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFMSTECEHLIRHMLVLDPSKRLSMEQICKHKWMKLGEADAEFDRLIAECQHLKTERQLEPLNEDVLLAMADMGLDKERTVQSLRADAYDHYSAIYSLLCDRLKRHKNLRIAPSPSIPRTVTFPTSASIQTEQTGNTMNINVPQVQLINPENQIVETDGTMNLDSDEGEEPSPEALVRYLSMRRHTVGVADPRTEVMEDLQKLLPGFPRVTPQAPFLQVTPNVNFMHNVLPRQNLQPTGQLEYKEQSLLQPPTLQLLNGMGPLGRRPQLLKRPRGPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQRYLANRSKRHTLAMTNPTAEIPPDLQRQLGQQSFRPRAWAPHLGPDQHRSIYKDSNTLHLPTERFSPVRRFSDGAASIQAFKAHLEKMGNNSSIKQLQQECEQLQKMYGGHMDERTLEKTQQQHMLYQQEQHHQILHQQIQDCIRPPQPSPPLQAPCENQPALLTHQLQRLRIQPSSPPPNHPNNHLFRQPNSSPPPVSSSVLQPHGAASQSQFQGMPSHSTIFPQSGNCSPPPAMGLTCLALQQQQSQPQQVTIQVQEPGDMVSSSLLPGASVGGQGLASHTRGMSLSPSASQIQMQHRASLMASLSYGHRQLSKQLSADSAESHSLNVNRYPPANYDQVHLHPHLFPEQPRVSPSNYSPPGGVGFPAAQQALKVPQLDQYPSFPPNAHQQQQQHYTASALQQALLSPTPPDYSRHQQVPHILQGLLSPRHSLTGHTDMRLPQAEFAQLIKRRQQQQQQQEFQELFRHMSQGDAGNMGTSMGQNLSERQSMSLPYQSADTYHPQNSPQHLLKIRAQECIQQVPASVPPPQGYGHQPALFHSESMEEDCACEGNRDSFPDSKSSNTLTKGCHESPLLVNAGGHGDPESLLGTANPAQELAAHQYRHQPAPGFRNKVPSRESIVGNCMDRSSPGQAMQVPDHNGLGYPVRPSSSEQRPRSLQRHHTIQNSDDAYVQLDNLPGMSLMAGKALSSARMSDAVLSQSSLMASQQLRDRDGEECGESLEGQEHANLGDGSQHLNTSCYPSTCITDVLLSYKHPEVPFGMEQAGV
SIO_010081: SIK3
subclass of: SO_0000673
so part of: SIK3
location: complement(join(923484..923641,923736..923868,924567..924727,931582..932459,932677..933037,933612..933721,934384..934469,934782..934907,935625..935775,938390..938533,941472..941542,942026..942079,942636..942701,943326..943479,943912..944021,944129..944206,944736..944879,945058..945168,945506..945624,947680..947803,948053..948177,953795..953956,959445..959508,960710..960751))
location: region:923484-960751:-1
so has part: feature:960710-960751:-1:exon
so has part: feature:959445-959508:-1:exon
so has part: feature:953795-953956:-1:exon
so has part: feature:948053-948177:-1:exon
so has part: feature:947680-947803:-1:exon
so has part: feature:945506-945624:-1:exon
so has part: feature:945058-945168:-1:exon
so has part: feature:944736-944879:-1:exon
so has part: feature:944129-944206:-1:exon
so has part: feature:943912-944021:-1:exon
so has part: feature:943326-943479:-1:exon
so has part: feature:942636-942701:-1:exon
so has part: feature:942026-942079:-1:exon
so has part: feature:941472-941542:-1:exon
so has part: feature:938390-938533:-1:exon
so has part: feature:935625-935775:-1:exon
so has part: feature:934782-934907:-1:exon
so has part: feature:934384-934469:-1:exon
so has part: feature:933612-933721:-1:exon
so has part: feature:932677-933037:-1:exon
so has part: feature:931582-932459:-1:exon
so has part: feature:924567-924727:-1:exon
so has part: feature:923736-923868:-1:exon
so has part: feature:923484-923641:-1:exon

XP_016159301.1
type: Protein
SIO_000068: ncbiprotein

position:923484:-1
position: 923484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960751:-1
position: 960751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960710-960751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959445-959508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953795-953956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:948053-948177:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:947680-947803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:945506-945624:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:945058-945168:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:944736-944879:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:944129-944206:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:943912-944021:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:943326-943479:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:942636-942701:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:942026-942079:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:941472-941542:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:938390-938533:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:935625-935775:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:934782-934907:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:934384-934469:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:933612-933721:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:932677-933037:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:931582-932459:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:924567-924727:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:923736-923868:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:923484-923641:-1:exon

PAFAH1B2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1000243..1003651
location: region:1000243-1003651:1
so has part: feature:1000243-1003651:1:exon
subclass of: SO_0000010

101815168
type: Gene
SIO_000068: ncbigene

position:1000243:1
position: 1000243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003651:1
position: 1003651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000243-1003651:1:exon

PAFAH1B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PAFAH1B2
product: platelet activating factor acetylhydrolase 1b catalytic subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005058597.2
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(1000243..1000416,1000948..1001037,1001824..1001940,1002173..1002295,1002886..1003651)
location: region:1000243-1003651:1
so has part: feature:1000243-1000416:1:exon
so has part: feature:1000948-1001037:1:exon
so has part: feature:1001824-1001940:1:exon
so has part: feature:1002173-1002295:1:exon
so has part: feature:1002886-1003651:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1000243-1000416:1:exon

position:1000416:1
position: 1000416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1000948-1001037:1:exon

position:1000948:1
position: 1000948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001037:1
position: 1001037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1001824-1001940:1:exon

position:1001824:1
position: 1001824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001940:1
position: 1001940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1002173-1002295:1:exon

position:1002173:1
position: 1002173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002295:1
position: 1002295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1002886-1003651:1:exon

position:1002886:1
position: 1002886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PAFAH1B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PAFAH1B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase IB subunit beta
translation: MGMGDSNPAAVPHAAEDIQGDDRWMSQHNRFVLDCKDKEPDVLFVGDSMVQLLQQYEIWRELFSPLHALNFGIGGDTTGHVLWRLKNGELENIKPKVIVVWVGTNNHENTAEEVAGGIEAIVRLINTQQPQAKVIVLGLLPRGEKPNPLRQKNAKVNHLLKASLPKLPNVQLLDVDVGFVHSDGTISYHDMFDFLHLTGGGYAKVCKPLHELIMQLLEETPEEKRAALA
SIO_010081: PAFAH1B2
subclass of: SO_0000673
so part of: PAFAH1B2
location: join(1000336..1000416,1000948..1001037,1001824..1001940,1002173..1002295,1002886..1003164)
location: region:1000336-1003164:1
so has part: feature:1000336-1000416:1:exon
so has part: feature:1000948-1001037:1:exon
so has part: feature:1001824-1001940:1:exon
so has part: feature:1002173-1002295:1:exon
so has part: feature:1002886-1003164:1:exon

XP_005058654.2
type: Protein
SIO_000068: ncbiprotein

position:1000336:1
position: 1000336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003164:1
position: 1003164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000336-1000416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1000948-1001037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1001824-1001940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1002173-1002295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1002886-1003164:1:exon

SIDT2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1009878..1016081
location: region:1009878-1016081:1
so has part: feature:1009878-1016081:1:exon
subclass of: SO_0000010

101821485
type: Gene
SIO_000068: ncbigene

position:1009878:1
position: 1009878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016081:1
position: 1016081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009878-1016081:1:exon

SIDT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SIDT2
product: SID1 transmembrane family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016303862.1
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(1009878..1009917,1010012..1010113,1010190..1010273,1010427..1010538,1010621..1010686,1010787..1010880,1011005..1011060,1011306..1011317,1011443..1011514,1011595..1011669,1012287..1012408,1012481..1012554,1012646..1012712,1012844..1012917,1013037..1013160,1013257..1013374,1013448..1013584,1013661..1013769,1013846..1013922,1014177..1014223,1014495..1014600,1014707..1014817,1014893..1015006,1015431..1016081)
location: region:1009878-1016081:1
so has part: feature:1009878-1009917:1:exon
so has part: feature:1010012-1010113:1:exon
so has part: feature:1010190-1010273:1:exon
so has part: feature:1010427-1010538:1:exon
so has part: feature:1010621-1010686:1:exon
so has part: feature:1010787-1010880:1:exon
so has part: feature:1011005-1011060:1:exon
so has part: feature:1011306-1011317:1:exon
so has part: feature:1011443-1011514:1:exon
so has part: feature:1011595-1011669:1:exon
so has part: feature:1012287-1012408:1:exon
so has part: feature:1012481-1012554:1:exon
so has part: feature:1012646-1012712:1:exon
so has part: feature:1012844-1012917:1:exon
so has part: feature:1013037-1013160:1:exon
so has part: feature:1013257-1013374:1:exon
so has part: feature:1013448-1013584:1:exon
so has part: feature:1013661-1013769:1:exon
so has part: feature:1013846-1013922:1:exon
so has part: feature:1014177-1014223:1:exon
so has part: feature:1014495-1014600:1:exon
so has part: feature:1014707-1014817:1:exon
so has part: feature:1014893-1015006:1:exon
so has part: feature:1015431-1016081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1009878-1009917:1:exon

position:1009917:1
position: 1009917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1010012-1010113:1:exon

position:1010012:1
position: 1010012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010113:1
position: 1010113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1010190-1010273:1:exon

position:1010190:1
position: 1010190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010273:1
position: 1010273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1010427-1010538:1:exon

position:1010427:1
position: 1010427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010538:1
position: 1010538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1010621-1010686:1:exon

position:1010621:1
position: 1010621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010686:1
position: 1010686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1010787-1010880:1:exon

position:1010787:1
position: 1010787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010880:1
position: 1010880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1011005-1011060:1:exon

position:1011005:1
position: 1011005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011060:1
position: 1011060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1011306-1011317:1:exon

position:1011306:1
position: 1011306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011317:1
position: 1011317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1011443-1011514:1:exon

position:1011443:1
position: 1011443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011514:1
position: 1011514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1011595-1011669:1:exon

position:1011595:1
position: 1011595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011669:1
position: 1011669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1012287-1012408:1:exon

position:1012287:1
position: 1012287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012408:1
position: 1012408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1012481-1012554:1:exon

position:1012481:1
position: 1012481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012554:1
position: 1012554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1012646-1012712:1:exon

position:1012646:1
position: 1012646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012712:1
position: 1012712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1012844-1012917:1:exon

position:1012844:1
position: 1012844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012917:1
position: 1012917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1013037-1013160:1:exon

position:1013037:1
position: 1013037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013160:1
position: 1013160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1013257-1013374:1:exon

position:1013257:1
position: 1013257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013374:1
position: 1013374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1013448-1013584:1:exon

position:1013448:1
position: 1013448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013584:1
position: 1013584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1013661-1013769:1:exon

position:1013661:1
position: 1013661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013769:1
position: 1013769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1013846-1013922:1:exon

position:1013846:1
position: 1013846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013922:1
position: 1013922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1014177-1014223:1:exon

position:1014177:1
position: 1014177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014223:1
position: 1014223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1014495-1014600:1:exon

position:1014495:1
position: 1014495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014600:1
position: 1014600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1014707-1014817:1:exon

position:1014707:1
position: 1014707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014817:1
position: 1014817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1014893-1015006:1:exon

position:1014893:1
position: 1014893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015006:1
position: 1015006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1015431-1016081:1:exon

position:1015431:1
position: 1015431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIDT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SIDT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SID1 transmembrane family member 2
translation: MAFPCSVISIQDILCPVYDLDNNVAFIGMYQTMTKKAAITVQKKDFPSHSFYVVVVVKTEDEACGGPLPYYPLSKDASPDEPVDQHDRQKTLEVVVSPAITSEAYVRSVLFCLGIFLSFYILTLLIACWESCRQHKRKGLLAAMDSPSLDTASLLGHSRSIPDSFLNHGPYDSYGYGSFGNGSSSSTEGITDSLASAEVSYSYVGERSLESVAGRPRLDSLSSVEEDDYDTLADIDYDKNVIRTKQYLCVADLARKDKRVLRKKYQIYFWNIATIAVFYALPVIQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYVLLGLLFLLIILQREINYNRALLRNDTHALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNYTNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLALVIFFSVVGVVFGKGNTAFWIVFSVIHIVATLLLSTQLYYMGRWKLDSGILRRILHVLYTDCVRQCSGPMYVDRMVLLVMGNIINWSLAAYGLIVRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIISTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLVLLTLDDDLDCVQRDKIYVF
SIO_010081: SIDT2
subclass of: SO_0000673
so part of: SIDT2
location: join(1010072..1010113,1010190..1010273,1010427..1010538,1010621..1010686,1010787..1010880,1011005..1011060,1011306..1011317,1011443..1011514,1011595..1011669,1012287..1012408,1012481..1012554,1012646..1012712,1012844..1012917,1013037..1013160,1013257..1013374,1013448..1013584,1013661..1013769,1013846..1013922,1014177..1014223,1014495..1014600,1014707..1014817,1014893..1015006,1015431..1015493)
location: region:1010072-1015493:1
so has part: feature:1010072-1010113:1:exon
so has part: feature:1010190-1010273:1:exon
so has part: feature:1010427-1010538:1:exon
so has part: feature:1010621-1010686:1:exon
so has part: feature:1010787-1010880:1:exon
so has part: feature:1011005-1011060:1:exon
so has part: feature:1011306-1011317:1:exon
so has part: feature:1011443-1011514:1:exon
so has part: feature:1011595-1011669:1:exon
so has part: feature:1012287-1012408:1:exon
so has part: feature:1012481-1012554:1:exon
so has part: feature:1012646-1012712:1:exon
so has part: feature:1012844-1012917:1:exon
so has part: feature:1013037-1013160:1:exon
so has part: feature:1013257-1013374:1:exon
so has part: feature:1013448-1013584:1:exon
so has part: feature:1013661-1013769:1:exon
so has part: feature:1013846-1013922:1:exon
so has part: feature:1014177-1014223:1:exon
so has part: feature:1014495-1014600:1:exon
so has part: feature:1014707-1014817:1:exon
so has part: feature:1014893-1015006:1:exon
so has part: feature:1015431-1015493:1:exon

XP_016159348.1
type: Protein
SIO_000068: ncbiprotein

position:1010072:1
position: 1010072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015493:1
position: 1015493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010072-1010113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1010190-1010273:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1010427-1010538:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1010621-1010686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1010787-1010880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1011005-1011060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1011306-1011317:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1011443-1011514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1011595-1011669:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1012287-1012408:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1012481-1012554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1012646-1012712:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1012844-1012917:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1013037-1013160:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1013257-1013374:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1013448-1013584:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1013661-1013769:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1013846-1013922:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1014177-1014223:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1014495-1014600:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1014707-1014817:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1014893-1015006:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1015431-1015493:1:exon

LOC107604171
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604171
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1018970..1020664
location: region:1018970-1020664:1
so has part: feature:1018970-1020664:1:exon
subclass of: SO_0000010

107604171
type: Gene
SIO_000068: ncbigene

position:1018970:1
position: 1018970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020664:1
position: 1020664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1018970-1020664:1:exon

LOC107604171
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604171
product: transgelin-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303864.1
SIO_010081: LOC107604171
subclass of: SO_0000673
so part of: LOC107604171
location: join(1018970..1019721,1020054..1020231,1020316..1020418,1020597..1020664)
location: region:1018970-1020664:1
so has part: feature:1018970-1019721:1:exon
so has part: feature:1020054-1020231:1:exon
so has part: feature:1020316-1020418:1:exon
so has part: feature:1020597-1020664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1018970-1019721:1:exon

position:1019721:1
position: 1019721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1020054-1020231:1:exon

position:1020054:1
position: 1020054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020231:1
position: 1020231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1020316-1020418:1:exon

position:1020316:1
position: 1020316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020418:1
position: 1020418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1020597-1020664:1:exon

position:1020597:1
position: 1020597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107604171
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604171
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transgelin-like
translation: MANKGPAYGMSRDVQSKIEKKYDDELEDRLVEWIVAQCGAAVGRPERGRLGFQVWLKNGIVLSRLVNSLYPDGSKPVKIPDAPPTMVFKQMEQIAQFLKAAEDYGVVKTDIFQTVDLFEAKDMAAVQRTLMALGSLAVTKNDGTTTGTPTGS
SIO_010081: LOC107604171
subclass of: SO_0000673
so part of: LOC107604171
location: join(1019542..1019721,1020054..1020231,1020316..1020417)
location: region:1019542-1020417:1
so has part: feature:1019542-1019721:1:exon
so has part: feature:1020054-1020231:1:exon
so has part: feature:1020316-1020417:1:exon

XP_016159350.1
type: Protein
SIO_000068: ncbiprotein

position:1019542:1
position: 1019542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020417:1
position: 1020417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1019542-1019721:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020054-1020231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020316-1020417:1:exon

LOC101821687
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101821687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1020491..1022978
location: region:1020491-1022978:1
so has part: feature:1020491-1022978:1:exon
subclass of: SO_0000010

101821687
type: Gene
SIO_000068: ncbigene

position:1020491:1
position: 1020491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022978:1
position: 1022978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020491-1022978:1:exon

LOC101821687
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101821687
product: transgelin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303817.1
SIO_010081: LOC101821687
subclass of: SO_0000673
so part of: LOC101821687
location: join(1020491..1020504,1020597..1020716,1021495..1021721,1021806..1021908,1022087..1022222,1022919..1022978)
location: region:1020491-1022978:1
so has part: feature:1020491-1020504:1:exon
so has part: feature:1020597-1020716:1:exon
so has part: feature:1021495-1021721:1:exon
so has part: feature:1021806-1021908:1:exon
so has part: feature:1022087-1022222:1:exon
so has part: feature:1022919-1022978:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1020491-1020504:1:exon

position:1020504:1
position: 1020504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1020597-1020716:1:exon

position:1020716:1
position: 1020716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1021495-1021721:1:exon

position:1021495:1
position: 1021495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021721:1
position: 1021721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1021806-1021908:1:exon

position:1021806:1
position: 1021806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021908:1
position: 1021908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1022087-1022222:1:exon

position:1022087:1
position: 1022087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1022222:1
position: 1022222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1022919-1022978:1:exon

position:1022919:1
position: 1022919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101821687
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101821687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transgelin-like
translation: MPNFQKAQEHKREFTESQLKEGKNIIGLQMGTNKGASQAGMSYGRGALREQLSRPRLPLRQVLSRLVNSLYPDGSKPVKIPDAPPTMVFKQMEQIAQFLKAAEDYGVVKTDIFQTVDLFEAKDMAAVQRTLMALGSLAVTKNDGNYHGDPNWFMKKAQEHKREFTESQLKEGKNIIGLQMGTNKGASQAGMSYGRPRQIRGTEGTQPPQMQHPGLGDAV
SIO_010081: LOC101821687
subclass of: SO_0000673
so part of: LOC101821687
location: join(1020491..1020504,1020597..1020716,1021495..1021721,1021806..1021908,1022087..1022222,1022919..1022978)
location: region:1020491-1022978:1
so has part: feature:1020491-1020504:1:exon
so has part: feature:1020597-1020716:1:exon
so has part: feature:1021495-1021721:1:exon
so has part: feature:1021806-1021908:1:exon
so has part: feature:1022087-1022222:1:exon
so has part: feature:1022919-1022978:1:exon

XP_016159303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1020491-1020504:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020597-1020716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1021495-1021721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1021806-1021908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1022087-1022222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1022919-1022978:1:exon

PCSK7
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PCSK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1023882..1038049)
location: region:1023882-1038049:-1
so has part: feature:1023882-1038049:-1:exon
subclass of: SO_0000010

101815358
type: Gene
SIO_000068: ncbigene

position:1023882:-1
position: 1023882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038049:-1
position: 1038049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023882-1038049:-1:exon

PCSK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PCSK7
product: proprotein convertase subtilisin/kexin type 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005058598.2
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(1023882..1025095,1025228..1025345,1025581..1025674,1025781..1025875,1025978..1026134,1026809..1026911,1027806..1027913,1029761..1029928,1031772..1031872,1032414..1032552,1033583..1033637,1034168..1034258,1036428..1036593,1036996..1037130,1037528..1038049))
location: region:1023882-1038049:-1
so has part: feature:1037528-1038049:-1:exon
so has part: feature:1036996-1037130:-1:exon
so has part: feature:1036428-1036593:-1:exon
so has part: feature:1034168-1034258:-1:exon
so has part: feature:1033583-1033637:-1:exon
so has part: feature:1032414-1032552:-1:exon
so has part: feature:1031772-1031872:-1:exon
so has part: feature:1029761-1029928:-1:exon
so has part: feature:1027806-1027913:-1:exon
so has part: feature:1026809-1026911:-1:exon
so has part: feature:1025978-1026134:-1:exon
so has part: feature:1025781-1025875:-1:exon
so has part: feature:1025581-1025674:-1:exon
so has part: feature:1025228-1025345:-1:exon
so has part: feature:1023882-1025095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1037528-1038049:-1:exon

position:1037528:-1
position: 1037528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1036996-1037130:-1:exon

position:1036996:-1
position: 1036996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037130:-1
position: 1037130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1036428-1036593:-1:exon

position:1036428:-1
position: 1036428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036593:-1
position: 1036593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1034168-1034258:-1:exon

position:1034168:-1
position: 1034168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034258:-1
position: 1034258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1033583-1033637:-1:exon

position:1033583:-1
position: 1033583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033637:-1
position: 1033637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1032414-1032552:-1:exon

position:1032414:-1
position: 1032414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032552:-1
position: 1032552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1031772-1031872:-1:exon

position:1031772:-1
position: 1031772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031872:-1
position: 1031872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1029761-1029928:-1:exon

position:1029761:-1
position: 1029761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029928:-1
position: 1029928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1027806-1027913:-1:exon

position:1027806:-1
position: 1027806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027913:-1
position: 1027913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1026809-1026911:-1:exon

position:1026809:-1
position: 1026809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026911:-1
position: 1026911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1025978-1026134:-1:exon

position:1025978:-1
position: 1025978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026134:-1
position: 1026134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1025781-1025875:-1:exon

position:1025781:-1
position: 1025781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025875:-1
position: 1025875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1025581-1025674:-1:exon

position:1025581:-1
position: 1025581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025674:-1
position: 1025674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1025228-1025345:-1:exon

position:1025228:-1
position: 1025228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025345:-1
position: 1025345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1023882-1025095:-1:exon

position:1025095:-1
position: 1025095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCSK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PCSK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proprotein convertase subtilisin/kexin type 7
translation: MPHWRRAAPLWSAGMEATLCIHTCLWLSAAWIPLASPAGPTSGGQRAPDTEARHGKLTWAVSLDAPEEELEQRAEELARTAGLVNMGRVGELKGHYLFAYQPDGQTATEHEAIRRSVDTLFAQHNSVRWHSEQKLLKRSKRCLRFNDPKYPQQWHLNNRKSPGKDINVTGVWERNVTGRGVTVVVVDDGVEHTIKDIQPNYSPEGSYDLNSNDPDPMPHPDEENGNHHGTRCAGEIAAVPNNSFCTVGVAYGSRIAGIRVLDGPLTDSMEAIAFNKHYQINDIYSCSWGPDDDGKTVDGPHQLGKAALQHGVIAGRRGFGSIFVVASGNGGQHNDNCNYDGYANSIYTVTIGAVDETGSMPFYAEECASMLAVTFSGGDKMMRSIVTTDWDLQKGTGCTEGHTGTSAAAPLAAGMIALMLQVRPCLTWRDVQHVIVFTATKYEDRHARWDTNQAGFSHSHQHGFGLLNAWRLVNAAKIWESVPYLASYMSPVLKEGRSIPVLPQELEVAWNVTPADLELSGMRTLEHVAVTVTITHPRRGNLEVRLLCPSGMMSVIGTARSMDSDPNGFSDWTFSTVRCWGEEAQGTYRLLVRDIGDESLRPGTLKHWQLTLYGSSWSPAEIKERQRLLEEAMSGQYLSGDFSLPCPPGLDIPEEQRYTITANTLKTLLLLGCFVVFWTLYYMLEVCLSRNEVGLDLACSSNCRWYQQGGKHRALESSLEMESVPLYQEKDVEEAETECEHLEPAQHGEEGSWTPAHPKLSSNGRAVSFHEAAPTGTGFLGREASTELLREDREQQPC
SIO_010081: PCSK7
subclass of: SO_0000673
so part of: PCSK7
location: complement(join(1024697..1025095,1025228..1025345,1025581..1025674,1025781..1025875,1025978..1026134,1026809..1026911,1027806..1027913,1029761..1029928,1031772..1031872,1032414..1032552,1033583..1033637,1034168..1034258,1036428..1036593,1036996..1037130,1037528..1037995))
location: region:1024697-1037995:-1
so has part: feature:1037528-1037995:-1:exon
so has part: feature:1036996-1037130:-1:exon
so has part: feature:1036428-1036593:-1:exon
so has part: feature:1034168-1034258:-1:exon
so has part: feature:1033583-1033637:-1:exon
so has part: feature:1032414-1032552:-1:exon
so has part: feature:1031772-1031872:-1:exon
so has part: feature:1029761-1029928:-1:exon
so has part: feature:1027806-1027913:-1:exon
so has part: feature:1026809-1026911:-1:exon
so has part: feature:1025978-1026134:-1:exon
so has part: feature:1025781-1025875:-1:exon
so has part: feature:1025581-1025674:-1:exon
so has part: feature:1025228-1025345:-1:exon
so has part: feature:1024697-1025095:-1:exon

XP_005058655.1
type: Protein
SIO_000068: ncbiprotein

position:1024697:-1
position: 1024697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037995:-1
position: 1037995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037528-1037995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1036996-1037130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1036428-1036593:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1034168-1034258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033583-1033637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1032414-1032552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1031772-1031872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1029761-1029928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1027806-1027913:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1026809-1026911:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1025978-1026134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1025781-1025875:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1025581-1025674:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1025228-1025345:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1024697-1025095:-1:exon

RNF214
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RNF214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1039591..1046338
location: region:1039591-1046338:1
so has part: feature:1039591-1046338:1:exon
subclass of: SO_0000010

101815557
type: Gene
SIO_000068: ncbigene

position:1039591:1
position: 1039591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046338:1
position: 1046338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039591-1046338:1:exon

RNF214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RNF214
product: ring finger protein 214
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005058600.2
SIO_010081: RNF214
subclass of: SO_0000673
so part of: RNF214
location: join(1039591..1039650,1040249..1040308,1040505..1040645,1040914..1041053,1041585..1041653,1042450..1042546,1042770..1042858,1043246..1043348,1043558..1043656,1043903..1044282,1044604..1044739,1044959..1045066,1045370..1045465,1046083..1046338)
location: region:1039591-1046338:1
so has part: feature:1039591-1039650:1:exon
so has part: feature:1040249-1040308:1:exon
so has part: feature:1040505-1040645:1:exon
so has part: feature:1040914-1041053:1:exon
so has part: feature:1041585-1041653:1:exon
so has part: feature:1042450-1042546:1:exon
so has part: feature:1042770-1042858:1:exon
so has part: feature:1043246-1043348:1:exon
so has part: feature:1043558-1043656:1:exon
so has part: feature:1043903-1044282:1:exon
so has part: feature:1044604-1044739:1:exon
so has part: feature:1044959-1045066:1:exon
so has part: feature:1045370-1045465:1:exon
so has part: feature:1046083-1046338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1039591-1039650:1:exon

position:1039650:1
position: 1039650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1040249-1040308:1:exon

position:1040249:1
position: 1040249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040308:1
position: 1040308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1040505-1040645:1:exon

position:1040505:1
position: 1040505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040645:1
position: 1040645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1040914-1041053:1:exon

position:1040914:1
position: 1040914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041053:1
position: 1041053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1041585-1041653:1:exon

position:1041585:1
position: 1041585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041653:1
position: 1041653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1042450-1042546:1:exon

position:1042450:1
position: 1042450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042546:1
position: 1042546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1042770-1042858:1:exon

position:1042770:1
position: 1042770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042858:1
position: 1042858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1043246-1043348:1:exon

position:1043246:1
position: 1043246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043348:1
position: 1043348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1043558-1043656:1:exon

position:1043558:1
position: 1043558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043656:1
position: 1043656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1043903-1044282:1:exon

position:1043903:1
position: 1043903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044282:1
position: 1044282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1044604-1044739:1:exon

position:1044604:1
position: 1044604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044739:1
position: 1044739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1044959-1045066:1:exon

position:1044959:1
position: 1044959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045066:1
position: 1045066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1045370-1045465:1:exon

position:1045370:1
position: 1045370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045465:1
position: 1045465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1046083-1046338:1:exon

position:1046083:1
position: 1046083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RNF214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 214
translation: MMSERALLKERYQEVLDKQRQVENQLQVQLKQLQQRREEEMKNHQEILKAIQDVTIKREETKKKMEKEKKEFLQKEQDLKAEIEKLCEKGRRLLKEQEEKENKIASLIAEQSDEKQLWEMELDKLKNQHNEINRNILEETERAWKAEILSLESRKELLVLKLEEAEKEAELHLTYLNCACRSAPPTLETMRPKQEWEMRLNRIRMTKQSVRDQFNDHIQMVRNGTKLSSLPQIPTPTLPPPPSETDFMLTAFQPSPSLTPRLPFPIGPVPVPMVMPSADPRALSFPLLNPAMSRPSQPSPPLPASQGRSSPVVASLLGTHSPHMAPAASIPPPPGLGALSVAAEFHRPPQPADKLEKLLEKLLTRFPQCNKAQLTNILQQIKTARRTMAGLTMEELNQLVAAKLAEQQERAAAGAQPLGRIRAPMFSAPLPQISTPMFLPPAQVAYPGTASHTPAACKLCLMCQKLVQPGDLHPMACSHVLHKECIKFWAQTNTNDTCPFCPSLK
SIO_010081: RNF214
subclass of: SO_0000673
so part of: RNF214
location: join(1040511..1040645,1040914..1041053,1041585..1041653,1042450..1042546,1042770..1042858,1043246..1043348,1043558..1043656,1043903..1044282,1044604..1044739,1044959..1045066,1045370..1045465,1046083..1046148)
location: region:1040511-1046148:1
so has part: feature:1040511-1040645:1:exon
so has part: feature:1040914-1041053:1:exon
so has part: feature:1041585-1041653:1:exon
so has part: feature:1042450-1042546:1:exon
so has part: feature:1042770-1042858:1:exon
so has part: feature:1043246-1043348:1:exon
so has part: feature:1043558-1043656:1:exon
so has part: feature:1043903-1044282:1:exon
so has part: feature:1044604-1044739:1:exon
so has part: feature:1044959-1045066:1:exon
so has part: feature:1045370-1045465:1:exon
so has part: feature:1046083-1046148:1:exon

XP_005058657.1
type: Protein
SIO_000068: ncbiprotein

position:1040511:1
position: 1040511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046148:1
position: 1046148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1040511-1040645:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1040914-1041053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1041585-1041653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042450-1042546:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042770-1042858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1043246-1043348:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1043558-1043656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1043903-1044282:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1044604-1044739:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1044959-1045066:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1045370-1045465:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1046083-1046148:1:exon

BACE1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BACE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1049593..1056599)
location: region:1049593-1056599:-1
so has part: feature:1049593-1056599:-1:exon
subclass of: SO_0000010

101816019
type: Gene
SIO_000068: ncbigene

position:1049593:-1
position: 1049593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056599:-1
position: 1056599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1049593-1056599:-1:exon

BACE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BACE1
product: beta-site APP-cleaving enzyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016303863.1
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(1049593..1049884,1050660..1050831,1050907..1051056,1051197..1051298,1051410..1051544,1051627..1051764,1051936..1052152,1052310..1052398,1056441..1056599))
location: region:1049593-1056599:-1
so has part: feature:1056441-1056599:-1:exon
so has part: feature:1052310-1052398:-1:exon
so has part: feature:1051936-1052152:-1:exon
so has part: feature:1051627-1051764:-1:exon
so has part: feature:1051410-1051544:-1:exon
so has part: feature:1051197-1051298:-1:exon
so has part: feature:1050907-1051056:-1:exon
so has part: feature:1050660-1050831:-1:exon
so has part: feature:1049593-1049884:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1056441-1056599:-1:exon

position:1056441:-1
position: 1056441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052310-1052398:-1:exon

position:1052310:-1
position: 1052310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052398:-1
position: 1052398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1051936-1052152:-1:exon

position:1051936:-1
position: 1051936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052152:-1
position: 1052152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1051627-1051764:-1:exon

position:1051627:-1
position: 1051627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051764:-1
position: 1051764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1051410-1051544:-1:exon

position:1051410:-1
position: 1051410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051544:-1
position: 1051544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1051197-1051298:-1:exon

position:1051197:-1
position: 1051197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051298:-1
position: 1051298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1050907-1051056:-1:exon

position:1050907:-1
position: 1050907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051056:-1
position: 1051056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1050660-1050831:-1:exon

position:1050660:-1
position: 1050660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050831:-1
position: 1050831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1049593-1049884:-1:exon

position:1049884:-1
position: 1049884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BACE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BACE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-secretase 1
translation: MIDNLRGKSGQGYYVEMTVGSPPQKLNILVDTGSSNFAVGAAPHPFLRRYYQRQLSSTYRDLRKGVYVPYTQGKWEGELGTDLVTIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTRVPNIFSLQLCGTGFSPNETEAVASVGGSMIIGGIDRSLYVGDIWYTPIRKEWYYEVIIVKLEVNGQDLNMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKTASSTEKFPDGFWLGEQLVCWQVGTTPWHIFPVLSLYLMGEATNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVDGPHPHSNMEDCGYNIPQTDESTLMTIAYVMAAICALFMLPLCLMVFQWRCFRCLRRDHDDFADDISLLK
SIO_010081: BACE1
subclass of: SO_0000673
so part of: BACE1
location: complement(join(1049643..1049884,1050660..1050831,1050907..1051056,1051197..1051298,1051410..1051544,1051627..1051764,1051936..1052152,1052310..1052398,1056441..1056515))
location: region:1049643-1056515:-1
so has part: feature:1056441-1056515:-1:exon
so has part: feature:1052310-1052398:-1:exon
so has part: feature:1051936-1052152:-1:exon
so has part: feature:1051627-1051764:-1:exon
so has part: feature:1051410-1051544:-1:exon
so has part: feature:1051197-1051298:-1:exon
so has part: feature:1050907-1051056:-1:exon
so has part: feature:1050660-1050831:-1:exon
so has part: feature:1049643-1049884:-1:exon

XP_016159349.1
type: Protein
SIO_000068: ncbiprotein

position:1049643:-1
position: 1049643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056515:-1
position: 1056515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1056441-1056515:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052310-1052398:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1051936-1052152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1051627-1051764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1051410-1051544:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1051197-1051298:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1050907-1051056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1050660-1050831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1049643-1049884:-1:exon

CEP164
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CEP164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057642..1087473
location: region:1057642-1087473:1
so has part: feature:1057642-1087473:1:exon
subclass of: SO_0000010

101821884
type: Gene
SIO_000068: ncbigene

position:1057642:1
position: 1057642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087473:1
position: 1087473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057642-1087473:1:exon

CEP164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CEP164
product: centrosomal protein 164, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303858.1
SIO_010081: CEP164
subclass of: SO_0000673
so part of: CEP164
location: join(1057642..1057691,1059088..1059177,1059513..1059624,1059941..1060175,1060568..1060726,1061364..1061492,1061842..1061919,1067087..1067170,1068027..1068110,1071427..1071497,1074586..1074798,1075918..1076052,1076205..1076421,1076978..1077055,1077301..1077432,1077680..1077802,1078558..1078701,1078879..1078974,1079295..1079363,1079586..1079764,1080252..1080378,1080780..1080844,1080975..1081182,1082802..1082909,1083807..1083921,1084394..1084711,1085033..1085099,1085390..1085503,1086314..1087473)
location: region:1057642-1087473:1
so has part: feature:1057642-1057691:1:exon
so has part: feature:1059088-1059177:1:exon
so has part: feature:1059513-1059624:1:exon
so has part: feature:1059941-1060175:1:exon
so has part: feature:1060568-1060726:1:exon
so has part: feature:1061364-1061492:1:exon
so has part: feature:1061842-1061919:1:exon
so has part: feature:1067087-1067170:1:exon
so has part: feature:1068027-1068110:1:exon
so has part: feature:1071427-1071497:1:exon
so has part: feature:1074586-1074798:1:exon
so has part: feature:1075918-1076052:1:exon
so has part: feature:1076205-1076421:1:exon
so has part: feature:1076978-1077055:1:exon
so has part: feature:1077301-1077432:1:exon
so has part: feature:1077680-1077802:1:exon
so has part: feature:1078558-1078701:1:exon
so has part: feature:1078879-1078974:1:exon
so has part: feature:1079295-1079363:1:exon
so has part: feature:1079586-1079764:1:exon
so has part: feature:1080252-1080378:1:exon
so has part: feature:1080780-1080844:1:exon
so has part: feature:1080975-1081182:1:exon
so has part: feature:1082802-1082909:1:exon
so has part: feature:1083807-1083921:1:exon
so has part: feature:1084394-1084711:1:exon
so has part: feature:1085033-1085099:1:exon
so has part: feature:1085390-1085503:1:exon
so has part: feature:1086314-1087473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057642-1057691:1:exon

position:1057691:1
position: 1057691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1059088-1059177:1:exon

position:1059088:1
position: 1059088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059177:1
position: 1059177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1059513-1059624:1:exon

position:1059513:1
position: 1059513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059624:1
position: 1059624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1059941-1060175:1:exon

position:1059941:1
position: 1059941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060175:1
position: 1060175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1060568-1060726:1:exon

position:1060568:1
position: 1060568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060726:1
position: 1060726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1061364-1061492:1:exon

position:1061364:1
position: 1061364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061492:1
position: 1061492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1061842-1061919:1:exon

position:1061842:1
position: 1061842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061919:1
position: 1061919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1067087-1067170:1:exon

position:1067087:1
position: 1067087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067170:1
position: 1067170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1068027-1068110:1:exon

position:1068027:1
position: 1068027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068110:1
position: 1068110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1071427-1071497:1:exon

position:1071427:1
position: 1071427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071497:1
position: 1071497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1074586-1074798:1:exon

position:1074586:1
position: 1074586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074798:1
position: 1074798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1075918-1076052:1:exon

position:1075918:1
position: 1075918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076052:1
position: 1076052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1076205-1076421:1:exon

position:1076205:1
position: 1076205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076421:1
position: 1076421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1076978-1077055:1:exon

position:1076978:1
position: 1076978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077055:1
position: 1077055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1077301-1077432:1:exon

position:1077301:1
position: 1077301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077432:1
position: 1077432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1077680-1077802:1:exon

position:1077680:1
position: 1077680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077802:1
position: 1077802
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:1078558-1078701:1:exon

position:1078558:1
position: 1078558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078701:1
position: 1078701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1078879-1078974:1:exon

position:1078879:1
position: 1078879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078974:1
position: 1078974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1079295-1079363:1:exon

position:1079295:1
position: 1079295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079363:1
position: 1079363
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:1079586-1079764:1:exon

position:1079586:1
position: 1079586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079764:1
position: 1079764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1080252-1080378:1:exon

position:1080252:1
position: 1080252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080378:1
position: 1080378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1080780-1080844:1:exon

position:1080780:1
position: 1080780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080844:1
position: 1080844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1080975-1081182:1:exon

position:1080975:1
position: 1080975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081182:1
position: 1081182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1082802-1082909:1:exon

position:1082802:1
position: 1082802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082909:1
position: 1082909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1083807-1083921:1:exon

position:1083807:1
position: 1083807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083921:1
position: 1083921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1084394-1084711:1:exon

position:1084394:1
position: 1084394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084711:1
position: 1084711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1085033-1085099:1:exon

position:1085033:1
position: 1085033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085099:1
position: 1085099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1085390-1085503:1:exon

position:1085390:1
position: 1085390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085503:1
position: 1085503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1086314-1087473:1:exon

position:1086314:1
position: 1086314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEP164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CEP164
product: centrosomal protein 164, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016303860.1
SIO_010081: CEP164
subclass of: SO_0000673
so part of: CEP164
location: join(1057642..1057691,1059088..1059177,1059513..1059624,1059941..1060175,1060568..1060726,1061364..1061492,1061842..1061919,1067087..1067170,1068027..1068110,1071427..1071497,1074586..1074798,1075918..1076052,1076205..1076421,1076978..1077055,1077301..1077432,1077680..1077802,1078558..1078701,1078891..1078974,1079295..1079363,1079586..1079764,1080252..1080378,1080780..1080844,1080972..1081182,1082802..1082909,1083807..1083921,1084394..1084711,1085033..1085099,1085390..1085503,1086314..1087473)
location: region:1057642-1087473:1
so has part: feature:1057642-1057691:1:exon
so has part: feature:1059088-1059177:1:exon
so has part: feature:1059513-1059624:1:exon
so has part: feature:1059941-1060175:1:exon
so has part: feature:1060568-1060726:1:exon
so has part: feature:1061364-1061492:1:exon
so has part: feature:1061842-1061919:1:exon
so has part: feature:1067087-1067170:1:exon
so has part: feature:1068027-1068110:1:exon
so has part: feature:1071427-1071497:1:exon
so has part: feature:1074586-1074798:1:exon
so has part: feature:1075918-1076052:1:exon
so has part: feature:1076205-1076421:1:exon
so has part: feature:1076978-1077055:1:exon
so has part: feature:1077301-1077432:1:exon
so has part: feature:1077680-1077802:1:exon
so has part: feature:1078558-1078701:1:exon
so has part: feature:1078891-1078974:1:exon
so has part: feature:1079295-1079363:1:exon
so has part: feature:1079586-1079764:1:exon
so has part: feature:1080252-1080378:1:exon
so has part: feature:1080780-1080844:1:exon
so has part: feature:1080972-1081182:1:exon
so has part: feature:1082802-1082909:1:exon
so has part: feature:1083807-1083921:1:exon
so has part: feature:1084394-1084711:1:exon
so has part: feature:1085033-1085099:1:exon
so has part: feature:1085390-1085503:1:exon
so has part: feature:1086314-1087473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057642-1057691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059088-1059177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059513-1059624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1059941-1060175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1060568-1060726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061364-1061492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1061842-1061919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067087-1067170:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1068027-1068110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071427-1071497:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074586-1074798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1075918-1076052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1076205-1076421:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1076978-1077055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1077301-1077432:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1077680-1077802:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078558-1078701:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078891-1078974:1:exon

position:1078891:1
position: 1078891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1079295-1079363:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1079586-1079764:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1080252-1080378:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1080780-1080844:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1080972-1081182:1:exon

position:1080972:1
position: 1080972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1082802-1082909:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1083807-1083921:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1084394-1084711:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1085033-1085099:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1085390-1085503:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1086314-1087473:1:exon

CEP164
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CEP164
product: centrosomal protein 164, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016303861.1
SIO_010081: CEP164
subclass of: SO_0000673
so part of: CEP164
location: join(1057642..1057691,1059088..1059177,1059513..1059624,1059941..1060175,1060568..1060726,1061364..1061492,1061842..1061919,1067087..1067170,1068027..1068110,1071427..1071497,1074586..1074798,1075918..1076052,1076205..1076421,1076978..1077055,1077301..1077432,1077680..1077802,1078558..1078701,1078891..1078974,1079295..1079363,1079586..1079764,1080252..1080378,1080780..1080844,1080975..1081182,1082802..1082909,1083807..1083921,1084394..1084711,1085033..1085099,1085390..1085503,1086314..1087473)
location: region:1057642-1087473:1
so has part: feature:1057642-1057691:1:exon
so has part: feature:1059088-1059177:1:exon
so has part: feature:1059513-1059624:1:exon
so has part: feature:1059941-1060175:1:exon
so has part: feature:1060568-1060726:1:exon
so has part: feature:1061364-1061492:1:exon
so has part: feature:1061842-1061919:1:exon
so has part: feature:1067087-1067170:1:exon
so has part: feature:1068027-1068110:1:exon
so has part: feature:1071427-1071497:1:exon
so has part: feature:1074586-1074798:1:exon
so has part: feature:1075918-1076052:1:exon
so has part: feature:1076205-1076421:1:exon
so has part: feature:1076978-1077055:1:exon
so has part: feature:1077301-1077432:1:exon
so has part: feature:1077680-1077802:1:exon
so has part: feature:1078558-1078701:1:exon
so has part: feature:1078891-1078974:1:exon
so has part: feature:1079295-1079363:1:exon
so has part: feature:1079586-1079764:1:exon
so has part: feature:1080252-1080378:1:exon
so has part: feature:1080780-1080844:1:exon
so has part: feature:1080975-1081182:1:exon
so has part: feature:1082802-1082909:1:exon
so has part: feature:1083807-1083921:1:exon
so has part: feature:1084394-1084711:1:exon
so has part: feature:1085033-1085099:1:exon
so has part: feature:1085390-1085503:1:exon
so has part: feature:1086314-1087473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057642-1057691:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059088-1059177:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059513-1059624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1059941-1060175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1060568-1060726:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061364-1061492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1061842-1061919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067087-1067170:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1068027-1068110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071427-1071497:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1074586-1074798:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1075918-1076052:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1076205-1076421:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1076978-1077055:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1077301-1077432:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1077680-1077802:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078558-1078701:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1078891-1078974:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1079295-1079363:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1079586-1079764:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1080252-1080378:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1080780-1080844:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1080975-1081182:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1082802-1082909:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1083807-1083921:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1084394-1084711:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1085033-1085099:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1085390-1085503:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1086314-1087473:1:exon

CEP164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CEP164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 164 kDa isoform X1
translation: MAGALRIGDQLILEEEYNESYVPKEQEIRDFAPTIGIDPDKESELLWLARECLVTPLPPQWKACQDIAGGDIYFFNFENGLSTWEHPCDEHYKQLVIREREKLLARGSMKKEKKEKKEKKEKKEKKEKKKDKKEKQFLKQLPPPGSQLAPIQPPLGTLSPLRGLAPSSSRALRGSLNLDLGSVVESSLIPEEATLPAEISRPTSRTRNLLGLICEEKSSSNVAVPEKWKNEEEESDNESFHGTSRLLKNVYLDVEALAGSFDFELSKASRASGCEQDLPVSGCSDQEVVQPVGLDLKSQLSEEVLGVGTVSPDLDSPECKELGEEEKDQSAEEEQRERTEAAERHPEKEIEQSLNQPEDESLEEIVKEVEAELEQEEIHLFQAKEEKIQQFQEEMRQEEEEEAEKLHQQKEKPLSTPEEDLAKSEQQEEELLVREDKAERLEKLRAQITSEMEAEEERMRAEQEARLQKLREEWESQQLVEKESLEREQQLALEEMRLAAEEARQKEMSELEQEKEQFLSELRERLDREKRKAAEELEEQFASELQQLKSAAEERHHEVVSSLQARLAEAQSSQEAQLREELQRAEQEVQHKALKVKEYERELSELMSDKRRQVEREHEGRMERMREQHREALARIQEQCQQEEQRQRAELLEGLRAEAARLRQLHDSEVKGLQAELEGRLSALQQRHREKPPVQERKLQDSEKELEVRMKSIQARSEHLLSQEESLQRRKQLLLDEEEQMQLQRNEAALASQLRLEESRKEHSSLLESVRQLRKTLEELQDQKAELEAQVDLLQSRSQRLQKRIGELEEAIRSKQEAVKELEAEESVESPRKKAELRVEDLRETPQAHTSRDPSPASQSPEESELHFDRVQSYLSAEGQSLGSAKEFLQRQRRLLRQRRSALRAASLRWQQDLRRAQESVQDPHSSQLLQGVQRNLEEEAKELDKMKLAMQKGQVLLKKKEEKLSQLESSLLEELSDEDTLKSSACKKMVTFDLSTSEDTNSTSSVNLGQSRFDLRRDLWPALQQDKIQHLRDSVQSITSELNAVLGLLDSLSHQQPPLLTSTPHQGIPLPTYPPLGNPPRACPLEQWARSSRLSSSYSLSGQSVDSVLAEKWHRYFPGGFSSLSGSLVPLDSKLGYVPADEQIRLFQYSKVSEPEKRNIEGMIESSKKWLKDFKDSKVPPSPRAQKPPGSSPSLLQLGLDENREIKVYHY
SIO_010081: CEP164
subclass of: SO_0000673
so part of: CEP164
location: join(1059099..1059177,1059513..1059624,1059941..1060175,1060568..1060726,1061364..1061492,1061842..1061919,1067087..1067170,1068027..1068110,1071427..1071497,1074586..1074798,1075918..1076052,1076205..1076421,1076978..1077055,1077301..1077432,1077680..1077802,1078558..1078701,1078879..1078974,1079295..1079363,1079586..1079764,1080252..1080378,1080780..1080844,1080975..1081182,1082802..1082909,1083807..1083921,1084394..1084711,1085033..1085099,1085390..1085503,1086314..1086413)
location: region:1059099-1086413:1
so has part: feature:1059099-1059177:1:exon
so has part: feature:1059513-1059624:1:exon
so has part: feature:1059941-1060175:1:exon
so has part: feature:1060568-1060726:1:exon
so has part: feature:1061364-1061492:1:exon
so has part: feature:1061842-1061919:1:exon
so has part: feature:1067087-1067170:1:exon
so has part: feature:1068027-1068110:1:exon
so has part: feature:1071427-1071497:1:exon
so has part: feature:1074586-1074798:1:exon
so has part: feature:1075918-1076052:1:exon
so has part: feature:1076205-1076421:1:exon
so has part: feature:1076978-1077055:1:exon
so has part: feature:1077301-1077432:1:exon
so has part: feature:1077680-1077802:1:exon
so has part: feature:1078558-1078701:1:exon
so has part: feature:1078879-1078974:1:exon
so has part: feature:1079295-1079363:1:exon
so has part: feature:1079586-1079764:1:exon
so has part: feature:1080252-1080378:1:exon
so has part: feature:1080780-1080844:1:exon
so has part: feature:1080975-1081182:1:exon
so has part: feature:1082802-1082909:1:exon
so has part: feature:1083807-1083921:1:exon
so has part: feature:1084394-1084711:1:exon
so has part: feature:1085033-1085099:1:exon
so has part: feature:1085390-1085503:1:exon
so has part: feature:1086314-1086413:1:exon

XP_016159344.1
type: Protein
SIO_000068: ncbiprotein

position:1059099:1
position: 1059099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086413:1
position: 1086413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059099-1059177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059513-1059624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059941-1060175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060568-1060726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061364-1061492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061842-1061919:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067087-1067170:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1068027-1068110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1071427-1071497:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1074586-1074798:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075918-1076052:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1076205-1076421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1076978-1077055:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1077301-1077432:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1077680-1077802:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1078558-1078701:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078879-1078974:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1079295-1079363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1079586-1079764:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1080252-1080378:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1080780-1080844:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1080975-1081182:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1082802-1082909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1083807-1083921:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1084394-1084711:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1085033-1085099:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1085390-1085503:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1086314-1086413:1:exon

CEP164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CEP164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 164 kDa isoform X2
translation: MAGALRIGDQLILEEEYNESYVPKEQEIRDFAPTIGIDPDKESELLWLARECLVTPLPPQWKACQDIAGGDIYFFNFENGLSTWEHPCDEHYKQLVIREREKLLARGSMKKEKKEKKEKKEKKEKKEKKKDKKEKQFLKQLPPPGSQLAPIQPPLGTLSPLRGLAPSSSRALRGSLNLDLGSVVESSLIPEEATLPAEISRPTSRTRNLLGLICEEKSSSNVAVPEKWKNEEEESDNESFHGTSRLLKNVYLDVEALAGSFDFELSKASRASGCEQDLPVSGCSDQEVVQPVGLDLKSQLSEEVLGVGTVSPDLDSPECKELGEEEKDQSAEEEQRERTEAAERHPEKEIEQSLNQPEDESLEEIVKEVEAELEQEEIHLFQAKEEKIQQFQEEMRQEEEEEAEKLHQQKEKPLSTPEEDLAKSEQQEEELLVREDKAERLEKLRAQITSEMEAEEERMRAEQEARLQKLREEWESQQLVEKESLEREQQLALEEMRLAAEEARQKEMSELEQEKEQFLSELRERLDREKRKAAEELEEQFASELQQLKSAAEERHHEVVSSLQARLAEAQSSQEAQLREELQRAEQEVQHKALKVKEYERELSELMSDKRRQVEREHEGRMERMREQHREALARIQEQCQQEEQRQRAELLEGLRAEAARLRQLHDSEVKGLQAELEGRLSALQQRHREKERKLQDSEKELEVRMKSIQARSEHLLSQEESLQRRKQLLLDEEEQMQLQRNEAALASQLRLEESRKEHSSLLESVRQLRKTLEELQDQKAELEAQVDLLQSRSQRLQKRIGELEEAIRSKQEAVKELEAEESVESPRKKAELRVEDLRETPQAHTSRDPSPASQSPEESELHFDRRVQSYLSAEGQSLGSAKEFLQRQRRLLRQRRSALRAASLRWQQDLRRAQESVQDPHSSQLLQGVQRNLEEEAKELDKMKLAMQKGQVLLKKKEEKLSQLESSLLEELSDEDTLKSSACKKMVTFDLSTSEDTNSTSSVNLGQSRFDLRRDLWPALQQDKIQHLRDSVQSITSELNAVLGLLDSLSHQQPPLLTSTPHQGIPLPTYPPLGNPPRACPLEQWARSSRLSSSYSLSGQSVDSVLAEKWHRYFPGGFSSLSGSLVPLDSKLGYVPADEQIRLFQYSKVSEPEKRNIEGMIESSKKWLKDFKDSKVPPSPRAQKPPGSSPSLLQLGLDENREIKVYHY
SIO_010081: CEP164
subclass of: SO_0000673
so part of: CEP164
location: join(1059099..1059177,1059513..1059624,1059941..1060175,1060568..1060726,1061364..1061492,1061842..1061919,1067087..1067170,1068027..1068110,1071427..1071497,1074586..1074798,1075918..1076052,1076205..1076421,1076978..1077055,1077301..1077432,1077680..1077802,1078558..1078701,1078891..1078974,1079295..1079363,1079586..1079764,1080252..1080378,1080780..1080844,1080972..1081182,1082802..1082909,1083807..1083921,1084394..1084711,1085033..1085099,1085390..1085503,1086314..1086413)
location: region:1059099-1086413:1
so has part: feature:1059099-1059177:1:exon
so has part: feature:1059513-1059624:1:exon
so has part: feature:1059941-1060175:1:exon
so has part: feature:1060568-1060726:1:exon
so has part: feature:1061364-1061492:1:exon
so has part: feature:1061842-1061919:1:exon
so has part: feature:1067087-1067170:1:exon
so has part: feature:1068027-1068110:1:exon
so has part: feature:1071427-1071497:1:exon
so has part: feature:1074586-1074798:1:exon
so has part: feature:1075918-1076052:1:exon
so has part: feature:1076205-1076421:1:exon
so has part: feature:1076978-1077055:1:exon
so has part: feature:1077301-1077432:1:exon
so has part: feature:1077680-1077802:1:exon
so has part: feature:1078558-1078701:1:exon
so has part: feature:1078891-1078974:1:exon
so has part: feature:1079295-1079363:1:exon
so has part: feature:1079586-1079764:1:exon
so has part: feature:1080252-1080378:1:exon
so has part: feature:1080780-1080844:1:exon
so has part: feature:1080972-1081182:1:exon
so has part: feature:1082802-1082909:1:exon
so has part: feature:1083807-1083921:1:exon
so has part: feature:1084394-1084711:1:exon
so has part: feature:1085033-1085099:1:exon
so has part: feature:1085390-1085503:1:exon
so has part: feature:1086314-1086413:1:exon

XP_016159346.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1059099-1059177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059513-1059624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059941-1060175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060568-1060726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061364-1061492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061842-1061919:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067087-1067170:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1068027-1068110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1071427-1071497:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1074586-1074798:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075918-1076052:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1076205-1076421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1076978-1077055:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1077301-1077432:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1077680-1077802:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1078558-1078701:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078891-1078974:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1079295-1079363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1079586-1079764:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1080252-1080378:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1080780-1080844:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1080972-1081182:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1082802-1082909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1083807-1083921:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1084394-1084711:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1085033-1085099:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1085390-1085503:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1086314-1086413:1:exon

CEP164
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CEP164
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 164 kDa isoform X3
translation: MAGALRIGDQLILEEEYNESYVPKEQEIRDFAPTIGIDPDKESELLWLARECLVTPLPPQWKACQDIAGGDIYFFNFENGLSTWEHPCDEHYKQLVIREREKLLARGSMKKEKKEKKEKKEKKEKKEKKKDKKEKQFLKQLPPPGSQLAPIQPPLGTLSPLRGLAPSSSRALRGSLNLDLGSVVESSLIPEEATLPAEISRPTSRTRNLLGLICEEKSSSNVAVPEKWKNEEEESDNESFHGTSRLLKNVYLDVEALAGSFDFELSKASRASGCEQDLPVSGCSDQEVVQPVGLDLKSQLSEEVLGVGTVSPDLDSPECKELGEEEKDQSAEEEQRERTEAAERHPEKEIEQSLNQPEDESLEEIVKEVEAELEQEEIHLFQAKEEKIQQFQEEMRQEEEEEAEKLHQQKEKPLSTPEEDLAKSEQQEEELLVREDKAERLEKLRAQITSEMEAEEERMRAEQEARLQKLREEWESQQLVEKESLEREQQLALEEMRLAAEEARQKEMSELEQEKEQFLSELRERLDREKRKAAEELEEQFASELQQLKSAAEERHHEVVSSLQARLAEAQSSQEAQLREELQRAEQEVQHKALKVKEYERELSELMSDKRRQVEREHEGRMERMREQHREALARIQEQCQQEEQRQRAELLEGLRAEAARLRQLHDSEVKGLQAELEGRLSALQQRHREKERKLQDSEKELEVRMKSIQARSEHLLSQEESLQRRKQLLLDEEEQMQLQRNEAALASQLRLEESRKEHSSLLESVRQLRKTLEELQDQKAELEAQVDLLQSRSQRLQKRIGELEEAIRSKQEAVKELEAEESVESPRKKAELRVEDLRETPQAHTSRDPSPASQSPEESELHFDRVQSYLSAEGQSLGSAKEFLQRQRRLLRQRRSALRAASLRWQQDLRRAQESVQDPHSSQLLQGVQRNLEEEAKELDKMKLAMQKGQVLLKKKEEKLSQLESSLLEELSDEDTLKSSACKKMVTFDLSTSEDTNSTSSVNLGQSRFDLRRDLWPALQQDKIQHLRDSVQSITSELNAVLGLLDSLSHQQPPLLTSTPHQGIPLPTYPPLGNPPRACPLEQWARSSRLSSSYSLSGQSVDSVLAEKWHRYFPGGFSSLSGSLVPLDSKLGYVPADEQIRLFQYSKVSEPEKRNIEGMIESSKKWLKDFKDSKVPPSPRAQKPPGSSPSLLQLGLDENREIKVYHY
SIO_010081: CEP164
subclass of: SO_0000673
so part of: CEP164
location: join(1059099..1059177,1059513..1059624,1059941..1060175,1060568..1060726,1061364..1061492,1061842..1061919,1067087..1067170,1068027..1068110,1071427..1071497,1074586..1074798,1075918..1076052,1076205..1076421,1076978..1077055,1077301..1077432,1077680..1077802,1078558..1078701,1078891..1078974,1079295..1079363,1079586..1079764,1080252..1080378,1080780..1080844,1080975..1081182,1082802..1082909,1083807..1083921,1084394..1084711,1085033..1085099,1085390..1085503,1086314..1086413)
location: region:1059099-1086413:1
so has part: feature:1059099-1059177:1:exon
so has part: feature:1059513-1059624:1:exon
so has part: feature:1059941-1060175:1:exon
so has part: feature:1060568-1060726:1:exon
so has part: feature:1061364-1061492:1:exon
so has part: feature:1061842-1061919:1:exon
so has part: feature:1067087-1067170:1:exon
so has part: feature:1068027-1068110:1:exon
so has part: feature:1071427-1071497:1:exon
so has part: feature:1074586-1074798:1:exon
so has part: feature:1075918-1076052:1:exon
so has part: feature:1076205-1076421:1:exon
so has part: feature:1076978-1077055:1:exon
so has part: feature:1077301-1077432:1:exon
so has part: feature:1077680-1077802:1:exon
so has part: feature:1078558-1078701:1:exon
so has part: feature:1078891-1078974:1:exon
so has part: feature:1079295-1079363:1:exon
so has part: feature:1079586-1079764:1:exon
so has part: feature:1080252-1080378:1:exon
so has part: feature:1080780-1080844:1:exon
so has part: feature:1080975-1081182:1:exon
so has part: feature:1082802-1082909:1:exon
so has part: feature:1083807-1083921:1:exon
so has part: feature:1084394-1084711:1:exon
so has part: feature:1085033-1085099:1:exon
so has part: feature:1085390-1085503:1:exon
so has part: feature:1086314-1086413:1:exon

XP_016159347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1059099-1059177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1059513-1059624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059941-1060175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060568-1060726:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061364-1061492:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061842-1061919:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1067087-1067170:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1068027-1068110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1071427-1071497:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1074586-1074798:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075918-1076052:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1076205-1076421:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1076978-1077055:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1077301-1077432:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1077680-1077802:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1078558-1078701:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1078891-1078974:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1079295-1079363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1079586-1079764:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1080252-1080378:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1080780-1080844:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1080975-1081182:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1082802-1082909:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1083807-1083921:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1084394-1084711:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1085033-1085099:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1085390-1085503:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1086314-1086413:1:exon

DSCAML1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DSCAML1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1095613..1187291)
location: region:1095613-1187291:-1
so has part: feature:1095613-1187291:-1:exon
subclass of: SO_0000010

101822078
type: Gene
SIO_000068: ncbigene

position:1095613:-1
position: 1095613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187291:-1
position: 1187291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095613-1187291:-1:exon

DSCAML1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DSCAML1
product: Down syndrome cell adhesion molecule like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303818.1
SIO_010081: DSCAML1
subclass of: SO_0000673
so part of: DSCAML1
location: complement(join(1095613..1095687,1096132..1096391,1099643..1099954,1100316..1100510,1100680..1100832,1100962..1101080,1101436..1101466,1101586..1101741,1101830..1102117,1102192..1102380,1104012..1104110,1104303..1104466,1104555..1104672,1104836..1104989,1106137..1106276,1106801..1106956,1107031..1107177,1108044..1108284,1109221..1109291,1109435..1109602,1109980..1110108,1110221..1110317,1110607..1110806,1116333..1116509,1116634..1116753,1116927..1117205,1120281..1120553,1122583..1122879,1123358..1123633,1124295..1124490,1124522..1124631,1126305..1126451,1187088..1187291))
location: region:1095613-1187291:-1
so has part: feature:1187088-1187291:-1:exon
so has part: feature:1126305-1126451:-1:exon
so has part: feature:1124522-1124631:-1:exon
so has part: feature:1124295-1124490:-1:exon
so has part: feature:1123358-1123633:-1:exon
so has part: feature:1122583-1122879:-1:exon
so has part: feature:1120281-1120553:-1:exon
so has part: feature:1116927-1117205:-1:exon
so has part: feature:1116634-1116753:-1:exon
so has part: feature:1116333-1116509:-1:exon
so has part: feature:1110607-1110806:-1:exon
so has part: feature:1110221-1110317:-1:exon
so has part: feature:1109980-1110108:-1:exon
so has part: feature:1109435-1109602:-1:exon
so has part: feature:1109221-1109291:-1:exon
so has part: feature:1108044-1108284:-1:exon
so has part: feature:1107031-1107177:-1:exon
so has part: feature:1106801-1106956:-1:exon
so has part: feature:1106137-1106276:-1:exon
so has part: feature:1104836-1104989:-1:exon
so has part: feature:1104555-1104672:-1:exon
so has part: feature:1104303-1104466:-1:exon
so has part: feature:1104012-1104110:-1:exon
so has part: feature:1102192-1102380:-1:exon
so has part: feature:1101830-1102117:-1:exon
so has part: feature:1101586-1101741:-1:exon
so has part: feature:1101436-1101466:-1:exon
so has part: feature:1100962-1101080:-1:exon
so has part: feature:1100680-1100832:-1:exon
so has part: feature:1100316-1100510:-1:exon
so has part: feature:1099643-1099954:-1:exon
so has part: feature:1096132-1096391:-1:exon
so has part: feature:1095613-1095687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1187088-1187291:-1:exon

position:1187088:-1
position: 1187088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1126305-1126451:-1:exon

position:1126305:-1
position: 1126305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1126451:-1
position: 1126451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1124522-1124631:-1:exon

position:1124522:-1
position: 1124522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124631:-1
position: 1124631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1124295-1124490:-1:exon

position:1124295:-1
position: 1124295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124490:-1
position: 1124490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1123358-1123633:-1:exon

position:1123358:-1
position: 1123358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123633:-1
position: 1123633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1122583-1122879:-1:exon

position:1122583:-1
position: 1122583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122879:-1
position: 1122879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1120281-1120553:-1:exon

position:1120281:-1
position: 1120281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1120553:-1
position: 1120553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1116927-1117205:-1:exon

position:1116927:-1
position: 1116927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117205:-1
position: 1117205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1116634-1116753:-1:exon

position:1116634:-1
position: 1116634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116753:-1
position: 1116753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1116333-1116509:-1:exon

position:1116333:-1
position: 1116333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116509:-1
position: 1116509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1110607-1110806:-1:exon

position:1110607:-1
position: 1110607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110806:-1
position: 1110806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1110221-1110317:-1:exon

position:1110221:-1
position: 1110221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110317:-1
position: 1110317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1109980-1110108:-1:exon

position:1109980:-1
position: 1109980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110108:-1
position: 1110108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1109435-1109602:-1:exon

position:1109435:-1
position: 1109435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109602:-1
position: 1109602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1109221-1109291:-1:exon

position:1109221:-1
position: 1109221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109291:-1
position: 1109291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1108044-1108284:-1:exon

position:1108044:-1
position: 1108044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108284:-1
position: 1108284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1107031-1107177:-1:exon

position:1107031:-1
position: 1107031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107177:-1
position: 1107177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1106801-1106956:-1:exon

position:1106801:-1
position: 1106801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106956:-1
position: 1106956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1106137-1106276:-1:exon

position:1106137:-1
position: 1106137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106276:-1
position: 1106276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1104836-1104989:-1:exon

position:1104836:-1
position: 1104836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104989:-1
position: 1104989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1104555-1104672:-1:exon

position:1104555:-1
position: 1104555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104672:-1
position: 1104672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1104303-1104466:-1:exon

position:1104303:-1
position: 1104303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104466:-1
position: 1104466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1104012-1104110:-1:exon

position:1104012:-1
position: 1104012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104110:-1
position: 1104110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1102192-1102380:-1:exon

position:1102192:-1
position: 1102192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102380:-1
position: 1102380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1101830-1102117:-1:exon

position:1101830:-1
position: 1101830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102117:-1
position: 1102117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1101586-1101741:-1:exon

position:1101586:-1
position: 1101586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101741:-1
position: 1101741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1101436-1101466:-1:exon

position:1101436:-1
position: 1101436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101466:-1
position: 1101466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1100962-1101080:-1:exon

position:1100962:-1
position: 1100962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101080:-1
position: 1101080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1100680-1100832:-1:exon

position:1100680:-1
position: 1100680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100832:-1
position: 1100832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1100316-1100510:-1:exon

position:1100316:-1
position: 1100316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100510:-1
position: 1100510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1099643-1099954:-1:exon

position:1099643:-1
position: 1099643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099954:-1
position: 1099954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1096132-1096391:-1:exon

position:1096132:-1
position: 1096132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096391:-1
position: 1096391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1095613-1095687:-1:exon

position:1095687:-1
position: 1095687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DSCAML1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DSCAML1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Down syndrome cell adhesion molecule-like protein 1
translation: MRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGGLYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGRLVELPCIASGYPNPAIASGYPNPAVRWIKDGRPLPADSRWSKRITGLTISDLRVEDSGTYICEVTNTFGSAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYISIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVTGPQIKDGGVYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKDSLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQPFEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKVMWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSMFLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITTKDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGEMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVPSSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQYLLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAIKWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQVPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFKLESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQGWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGNETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKATIPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTPSEPGICRFTASPPKPQDSERGKGVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPCPVVPPREASIRNLARAYHAQARHMTLEPGAKPLGLPPPASAATTLPQRTLPMPGPAGPAPAPMSTSGVGRSQKQGAGAYSKSYTLV
SIO_010081: DSCAML1
subclass of: SO_0000673
so part of: DSCAML1
location: complement(join(1095613..1095687,1096132..1096391,1099643..1099954,1100316..1100510,1100680..1100832,1100962..1101080,1101436..1101466,1101586..1101741,1101830..1102117,1102192..1102380,1104012..1104110,1104303..1104466,1104555..1104672,1104836..1104989,1106137..1106276,1106801..1106956,1107031..1107177,1108044..1108284,1109221..1109291,1109435..1109602,1109980..1110108,1110221..1110317,1110607..1110806,1116333..1116509,1116634..1116753,1116927..1117205,1120281..1120553,1122583..1122879,1123358..1123633,1124295..1124490,1124522..1124631,1126305..1126451,1187088..1187190))
location: region:1095613-1187190:-1
so has part: feature:1187088-1187190:-1:exon
so has part: feature:1126305-1126451:-1:exon
so has part: feature:1124522-1124631:-1:exon
so has part: feature:1124295-1124490:-1:exon
so has part: feature:1123358-1123633:-1:exon
so has part: feature:1122583-1122879:-1:exon
so has part: feature:1120281-1120553:-1:exon
so has part: feature:1116927-1117205:-1:exon
so has part: feature:1116634-1116753:-1:exon
so has part: feature:1116333-1116509:-1:exon
so has part: feature:1110607-1110806:-1:exon
so has part: feature:1110221-1110317:-1:exon
so has part: feature:1109980-1110108:-1:exon
so has part: feature:1109435-1109602:-1:exon
so has part: feature:1109221-1109291:-1:exon
so has part: feature:1108044-1108284:-1:exon
so has part: feature:1107031-1107177:-1:exon
so has part: feature:1106801-1106956:-1:exon
so has part: feature:1106137-1106276:-1:exon
so has part: feature:1104836-1104989:-1:exon
so has part: feature:1104555-1104672:-1:exon
so has part: feature:1104303-1104466:-1:exon
so has part: feature:1104012-1104110:-1:exon
so has part: feature:1102192-1102380:-1:exon
so has part: feature:1101830-1102117:-1:exon
so has part: feature:1101586-1101741:-1:exon
so has part: feature:1101436-1101466:-1:exon
so has part: feature:1100962-1101080:-1:exon
so has part: feature:1100680-1100832:-1:exon
so has part: feature:1100316-1100510:-1:exon
so has part: feature:1099643-1099954:-1:exon
so has part: feature:1096132-1096391:-1:exon
so has part: feature:1095613-1095687:-1:exon

XP_016159304.1
type: Protein
SIO_000068: ncbiprotein

position:1187190:-1
position: 1187190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187088-1187190:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1126305-1126451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124522-1124631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1124295-1124490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1123358-1123633:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1122583-1122879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1120281-1120553:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1116927-1117205:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1116634-1116753:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1116333-1116509:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1110607-1110806:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1110221-1110317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1109980-1110108:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1109435-1109602:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1109221-1109291:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1108044-1108284:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1107031-1107177:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1106801-1106956:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1106137-1106276:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1104836-1104989:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1104555-1104672:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1104303-1104466:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1104012-1104110:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1102192-1102380:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1101830-1102117:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1101586-1101741:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1101436-1101466:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1100962-1101080:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1100680-1100832:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1100316-1100510:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1099643-1099954:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1096132-1096391:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1095613-1095687:-1:exon

LOC101816534
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101816534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1208224..1214978)
location: region:1208224-1214978:-1
so has part: feature:1208224-1214978:-1:exon
subclass of: SO_0000010

101816534
type: Gene
SIO_000068: ncbigene

position:1208224:-1
position: 1208224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214978:-1
position: 1214978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208224-1214978:-1:exon

LOC101816534
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101816534
product: uncharacterized LOC101816534
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303819.1
SIO_010081: LOC101816534
subclass of: SO_0000673
so part of: LOC101816534
location: complement(join(1208224..1208401,1208538..1208568,1208707..1208743,1209278..1209352,1209497..1209535,1210155..1210252,1212387..1212393,1213328..1213402,1213942..1213991,1214165..1214201,1214327..1214401,1214514..1214555,1214754..1214978))
location: region:1208224-1214978:-1
so has part: feature:1214754-1214978:-1:exon
so has part: feature:1214514-1214555:-1:exon
so has part: feature:1214327-1214401:-1:exon
so has part: feature:1214165-1214201:-1:exon
so has part: feature:1213942-1213991:-1:exon
so has part: feature:1213328-1213402:-1:exon
so has part: feature:1212387-1212393:-1:exon
so has part: feature:1210155-1210252:-1:exon
so has part: feature:1209497-1209535:-1:exon
so has part: feature:1209278-1209352:-1:exon
so has part: feature:1208707-1208743:-1:exon
so has part: feature:1208538-1208568:-1:exon
so has part: feature:1208224-1208401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1214754-1214978:-1:exon

position:1214754:-1
position: 1214754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1214514-1214555:-1:exon

position:1214514:-1
position: 1214514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214555:-1
position: 1214555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1214327-1214401:-1:exon

position:1214327:-1
position: 1214327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214401:-1
position: 1214401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1214165-1214201:-1:exon

position:1214165:-1
position: 1214165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214201:-1
position: 1214201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1213942-1213991:-1:exon

position:1213942:-1
position: 1213942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213991:-1
position: 1213991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1213328-1213402:-1:exon

position:1213328:-1
position: 1213328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213402:-1
position: 1213402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1212387-1212393:-1:exon

position:1212387:-1
position: 1212387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212393:-1
position: 1212393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1210155-1210252:-1:exon

position:1210155:-1
position: 1210155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210252:-1
position: 1210252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1209497-1209535:-1:exon

position:1209497:-1
position: 1209497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209535:-1
position: 1209535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1209278-1209352:-1:exon

position:1209278:-1
position: 1209278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1209352:-1
position: 1209352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1208707-1208743:-1:exon

position:1208707:-1
position: 1208707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208743:-1
position: 1208743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1208538-1208568:-1:exon

position:1208538:-1
position: 1208538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208568:-1
position: 1208568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1208224-1208401:-1:exon

position:1208401:-1
position: 1208401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101816534
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101816534
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101816534
translation: MEAALLFLCSLLVPAAVADVATQEKEEEDPFNYDYQSLRIGGLVFAVVLFTVGILLILSRRCRCSFKQKPRAPGEEEAQAENLITSNDPETRGETLGAQMPAACEETEPPAAEQHLMRFVSQLMRFPVGAHSQSEAPARRHAEAMGDEQVPEQGQDRFSYDYDTIRHGGLIFAVVAFVIGLLIILSQRFHCGGRKKRRQGSEEEL
SIO_010081: LOC101816534
subclass of: SO_0000673
so part of: LOC101816534
location: complement(join(1208544..1208568,1208707..1208743,1209278..1209352,1209497..1209535,1210155..1210252,1212387..1212393,1213328..1213402,1213942..1213991,1214165..1214201,1214327..1214401,1214514..1214555,1214754..1214811))
location: region:1208544-1214811:-1
so has part: feature:1214754-1214811:-1:exon
so has part: feature:1214514-1214555:-1:exon
so has part: feature:1214327-1214401:-1:exon
so has part: feature:1214165-1214201:-1:exon
so has part: feature:1213942-1213991:-1:exon
so has part: feature:1213328-1213402:-1:exon
so has part: feature:1212387-1212393:-1:exon
so has part: feature:1210155-1210252:-1:exon
so has part: feature:1209497-1209535:-1:exon
so has part: feature:1209278-1209352:-1:exon
so has part: feature:1208707-1208743:-1:exon
so has part: feature:1208544-1208568:-1:exon

XP_016159305.1
type: Protein
SIO_000068: ncbiprotein

position:1208544:-1
position: 1208544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214811:-1
position: 1214811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214754-1214811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1214514-1214555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1214327-1214401:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1214165-1214201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1213942-1213991:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1213328-1213402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212387-1212393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210155-1210252:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1209497-1209535:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1209278-1209352:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1208707-1208743:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1208544-1208568:-1:exon

TMPRSS13
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TMPRSS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1227955..1239322)
location: region:1227955-1239322:-1
so has part: feature:1227955-1239322:-1:exon
subclass of: SO_0000010

101818410
type: Gene
SIO_000068: ncbigene

position:1227955:-1
position: 1227955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239322:-1
position: 1239322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1227955-1239322:-1:exon

TMPRSS13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMPRSS13
product: transmembrane protease, serine 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303870.1
SIO_010081: TMPRSS13
subclass of: SO_0000673
so part of: TMPRSS13
location: complement(join(1227955..1228769,1228860..1229012,1229100..1229242,1229460..1229558,1231758..1231930,1232014..1232173,1232422..1232465,1232549..1232641,1232827..1232956,1233035..1233157,1233887..1233988,1234192..1234321,1239017..1239322))
location: region:1227955-1239322:-1
so has part: feature:1239017-1239322:-1:exon
so has part: feature:1234192-1234321:-1:exon
so has part: feature:1233887-1233988:-1:exon
so has part: feature:1233035-1233157:-1:exon
so has part: feature:1232827-1232956:-1:exon
so has part: feature:1232549-1232641:-1:exon
so has part: feature:1232422-1232465:-1:exon
so has part: feature:1232014-1232173:-1:exon
so has part: feature:1231758-1231930:-1:exon
so has part: feature:1229460-1229558:-1:exon
so has part: feature:1229100-1229242:-1:exon
so has part: feature:1228860-1229012:-1:exon
so has part: feature:1227955-1228769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1239017-1239322:-1:exon

position:1239017:-1
position: 1239017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1234192-1234321:-1:exon

position:1234192:-1
position: 1234192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234321:-1
position: 1234321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1233887-1233988:-1:exon

position:1233887:-1
position: 1233887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233988:-1
position: 1233988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1233035-1233157:-1:exon

position:1233035:-1
position: 1233035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233157:-1
position: 1233157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1232827-1232956:-1:exon

position:1232827:-1
position: 1232827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232956:-1
position: 1232956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1232549-1232641:-1:exon

position:1232549:-1
position: 1232549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232641:-1
position: 1232641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1232422-1232465:-1:exon

position:1232422:-1
position: 1232422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232465:-1
position: 1232465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1232014-1232173:-1:exon

position:1232014:-1
position: 1232014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232173:-1
position: 1232173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1231758-1231930:-1:exon

position:1231758:-1
position: 1231758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1231930:-1
position: 1231930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1229460-1229558:-1:exon

position:1229460:-1
position: 1229460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229558:-1
position: 1229558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1229100-1229242:-1:exon

position:1229100:-1
position: 1229100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229242:-1
position: 1229242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1228860-1229012:-1:exon

position:1228860:-1
position: 1228860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229012:-1
position: 1229012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1227955-1228769:-1:exon

position:1228769:-1
position: 1228769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMPRSS13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMPRSS13
product: transmembrane protease, serine 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005058612.2
SIO_010081: TMPRSS13
subclass of: SO_0000673
so part of: TMPRSS13
location: complement(join(1227955..1228769,1228860..1229012,1229100..1229242,1229460..1229558,1231758..1231930,1232014..1232173,1232422..1232465,1232549..1232641,1232827..1232956,1233035..1233157,1233887..1233988,1234192..1234372,1239017..1239321))
location: region:1227955-1239321:-1
so has part: feature:1239017-1239321:-1:exon
so has part: feature:1234192-1234372:-1:exon
so has part: feature:1233887-1233988:-1:exon
so has part: feature:1233035-1233157:-1:exon
so has part: feature:1232827-1232956:-1:exon
so has part: feature:1232549-1232641:-1:exon
so has part: feature:1232422-1232465:-1:exon
so has part: feature:1232014-1232173:-1:exon
so has part: feature:1231758-1231930:-1:exon
so has part: feature:1229460-1229558:-1:exon
so has part: feature:1229100-1229242:-1:exon
so has part: feature:1228860-1229012:-1:exon
so has part: feature:1227955-1228769:-1:exon

position:1239321:-1
position: 1239321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239017-1239321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234192-1234372:-1:exon

position:1234372:-1
position: 1234372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1233887-1233988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233035-1233157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232827-1232956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1232549-1232641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1232422-1232465:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1232014-1232173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1231758-1231930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229460-1229558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229100-1229242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1228860-1229012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1227955-1228769:-1:exon

TMPRSS13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMPRSS13
product: transmembrane protease, serine 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016303869.1
SIO_010081: TMPRSS13
subclass of: SO_0000673
so part of: TMPRSS13
location: complement(join(1227955..1228769,1228860..1229012,1229100..1229242,1229460..1229558,1231758..1231930,1232014..1232173,1232422..1232465,1232549..1232641,1232827..1232956,1233035..1233157,1233887..1233988,1234198..1234372,1239017..1239318))
location: region:1227955-1239318:-1
so has part: feature:1239017-1239318:-1:exon
so has part: feature:1234198-1234372:-1:exon
so has part: feature:1233887-1233988:-1:exon
so has part: feature:1233035-1233157:-1:exon
so has part: feature:1232827-1232956:-1:exon
so has part: feature:1232549-1232641:-1:exon
so has part: feature:1232422-1232465:-1:exon
so has part: feature:1232014-1232173:-1:exon
so has part: feature:1231758-1231930:-1:exon
so has part: feature:1229460-1229558:-1:exon
so has part: feature:1229100-1229242:-1:exon
so has part: feature:1228860-1229012:-1:exon
so has part: feature:1227955-1228769:-1:exon

position:1239318:-1
position: 1239318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239017-1239318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234198-1234372:-1:exon

position:1234198:-1
position: 1234198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1233887-1233988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233035-1233157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232827-1232956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1232549-1232641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1232422-1232465:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1232014-1232173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1231758-1231930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229460-1229558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229100-1229242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1228860-1229012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1227955-1228769:-1:exon

TMPRSS13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TMPRSS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 13 isoform X3
translation: MDGKTSPVSSIFGARPPQPRENVLGISFKPYSPESGPAPSPCSACESTRKGSSMFRAPCMSQRRLALIFCVSVLIVLLIALILLFMFWRSQTGIVYKEPAESCKDSAVRCDGVVDCSQRSDELGCVRFLSEESLLHVYSSTESQWLPVCSSDWDESLSRKTCRQLGFQNASQTEYIPLRVSGKSLTVTDERETIQQSLNSSQCLTGKYVSLRCTTCGQRISGRIIGGKETSVNKWPWQVSVQYGPIHICGGTIIDAQWVLTAAHCFFMNSVKILDDWKVYGGVSDLKQPMEGIPVSQVIINSNYSDDHDDYDIALMKLSKPLTLSAQVRPACLPMYGQRFQTGRSCFITGFGKTRENEDNTSPKLREAEVKLIDYKICNSDKVYEGYLTPRMMCAGYLQGGKDACQGDSGGPLVCEDDGRWYVAGVTSWGTGCGQKNKPGVYTRVTKLLSWIYSKMESEND
SIO_010081: TMPRSS13
subclass of: SO_0000673
so part of: TMPRSS13
location: complement(join(1228755..1228769,1228860..1229012,1229100..1229242,1229460..1229558,1231758..1231930,1232014..1232173,1232422..1232465,1232549..1232641,1232827..1232956,1233035..1233157,1233887..1233988,1234192..1234321,1239017..1239037))
location: region:1228755-1239037:-1
so has part: feature:1239017-1239037:-1:exon
so has part: feature:1234192-1234321:-1:exon
so has part: feature:1233887-1233988:-1:exon
so has part: feature:1233035-1233157:-1:exon
so has part: feature:1232827-1232956:-1:exon
so has part: feature:1232549-1232641:-1:exon
so has part: feature:1232422-1232465:-1:exon
so has part: feature:1232014-1232173:-1:exon
so has part: feature:1231758-1231930:-1:exon
so has part: feature:1229460-1229558:-1:exon
so has part: feature:1229100-1229242:-1:exon
so has part: feature:1228860-1229012:-1:exon
so has part: feature:1228755-1228769:-1:exon

XP_016159356.1
type: Protein
SIO_000068: ncbiprotein

position:1228755:-1
position: 1228755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239037:-1
position: 1239037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239017-1239037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234192-1234321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233887-1233988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233035-1233157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232827-1232956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1232549-1232641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1232422-1232465:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1232014-1232173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1231758-1231930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229460-1229558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229100-1229242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1228860-1229012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1228755-1228769:-1:exon

TMPRSS13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TMPRSS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 13 isoform X2
translation: MDGKTSPTTASPSSVPPSLLHVSKVSSIFGARPPQPRENVLGISFKPYSPESGPAPSPCSACESTRSSMFRAPCMSQRRLALIFCVSVLIVLLIALILLFMFWRSQTGIVYKEPAESCKDSAVRCDGVVDCSQRSDELGCVRFLSEESLLHVYSSTESQWLPVCSSDWDESLSRKTCRQLGFQNASQTEYIPLRVSGKSLTVTDERETIQQSLNSSQCLTGKYVSLRCTTCGQRISGRIIGGKETSVNKWPWQVSVQYGPIHICGGTIIDAQWVLTAAHCFFMNSVKILDDWKVYGGVSDLKQPMEGIPVSQVIINSNYSDDHDDYDIALMKLSKPLTLSAQVRPACLPMYGQRFQTGRSCFITGFGKTRENEDNTSPKLREAEVKLIDYKICNSDKVYEGYLTPRMMCAGYLQGGKDACQGDSGGPLVCEDDGRWYVAGVTSWGTGCGQKNKPGVYTRVTKLLSWIYSKMESEND
SIO_010081: TMPRSS13
subclass of: SO_0000673
so part of: TMPRSS13
location: complement(join(1228755..1228769,1228860..1229012,1229100..1229242,1229460..1229558,1231758..1231930,1232014..1232173,1232422..1232465,1232549..1232641,1232827..1232956,1233035..1233157,1233887..1233988,1234198..1234372,1239017..1239037))
location: region:1228755-1239037:-1
so has part: feature:1239017-1239037:-1:exon
so has part: feature:1234198-1234372:-1:exon
so has part: feature:1233887-1233988:-1:exon
so has part: feature:1233035-1233157:-1:exon
so has part: feature:1232827-1232956:-1:exon
so has part: feature:1232549-1232641:-1:exon
so has part: feature:1232422-1232465:-1:exon
so has part: feature:1232014-1232173:-1:exon
so has part: feature:1231758-1231930:-1:exon
so has part: feature:1229460-1229558:-1:exon
so has part: feature:1229100-1229242:-1:exon
so has part: feature:1228860-1229012:-1:exon
so has part: feature:1228755-1228769:-1:exon

XP_016159355.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1239017-1239037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234198-1234372:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233887-1233988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233035-1233157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232827-1232956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1232549-1232641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1232422-1232465:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1232014-1232173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1231758-1231930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229460-1229558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229100-1229242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1228860-1229012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1228755-1228769:-1:exon

TMPRSS13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TMPRSS13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 13 isoform X1
translation: MDGKTSPTTASPSSVPPSLLHVSKVSSIFGARPPQPRENVLGISFKPYSPESGPAPSPCSACESTRKGSSMFRAPCMSQRRLALIFCVSVLIVLLIALILLFMFWRSQTGIVYKEPAESCKDSAVRCDGVVDCSQRSDELGCVRFLSEESLLHVYSSTESQWLPVCSSDWDESLSRKTCRQLGFQNASQTEYIPLRVSGKSLTVTDERETIQQSLNSSQCLTGKYVSLRCTTCGQRISGRIIGGKETSVNKWPWQVSVQYGPIHICGGTIIDAQWVLTAAHCFFMNSVKILDDWKVYGGVSDLKQPMEGIPVSQVIINSNYSDDHDDYDIALMKLSKPLTLSAQVRPACLPMYGQRFQTGRSCFITGFGKTRENEDNTSPKLREAEVKLIDYKICNSDKVYEGYLTPRMMCAGYLQGGKDACQGDSGGPLVCEDDGRWYVAGVTSWGTGCGQKNKPGVYTRVTKLLSWIYSKMESEND
SIO_010081: TMPRSS13
subclass of: SO_0000673
so part of: TMPRSS13
location: complement(join(1228755..1228769,1228860..1229012,1229100..1229242,1229460..1229558,1231758..1231930,1232014..1232173,1232422..1232465,1232549..1232641,1232827..1232956,1233035..1233157,1233887..1233988,1234192..1234372,1239017..1239037))
location: region:1228755-1239037:-1
so has part: feature:1239017-1239037:-1:exon
so has part: feature:1234192-1234372:-1:exon
so has part: feature:1233887-1233988:-1:exon
so has part: feature:1233035-1233157:-1:exon
so has part: feature:1232827-1232956:-1:exon
so has part: feature:1232549-1232641:-1:exon
so has part: feature:1232422-1232465:-1:exon
so has part: feature:1232014-1232173:-1:exon
so has part: feature:1231758-1231930:-1:exon
so has part: feature:1229460-1229558:-1:exon
so has part: feature:1229100-1229242:-1:exon
so has part: feature:1228860-1229012:-1:exon
so has part: feature:1228755-1228769:-1:exon

XP_005058669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1239017-1239037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1234192-1234372:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1233887-1233988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233035-1233157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1232827-1232956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1232549-1232641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1232422-1232465:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1232014-1232173:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1231758-1231930:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1229460-1229558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1229100-1229242:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1228860-1229012:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1228755-1228769:-1:exon

IL10RA
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: IL10RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1242112..1248029
location: region:1242112-1248029:1
so has part: feature:1242112-1248029:1:exon
subclass of: SO_0000010

101818206
type: Gene
SIO_000068: ncbigene

position:1242112:1
position: 1242112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248029:1
position: 1248029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242112-1248029:1:exon

IL10RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IL10RA
product: interleukin 10 receptor subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005058610.2
SIO_010081: IL10RA
subclass of: SO_0000673
so part of: IL10RA
location: join(1242112..1242214,1243924..1244047,1244140..1244318,1244575..1244741,1245032..1245182,1245394..1245509,1247096..1248029)
location: region:1242112-1248029:1
so has part: feature:1242112-1242214:1:exon
so has part: feature:1243924-1244047:1:exon
so has part: feature:1244140-1244318:1:exon
so has part: feature:1244575-1244741:1:exon
so has part: feature:1245032-1245182:1:exon
so has part: feature:1245394-1245509:1:exon
so has part: feature:1247096-1248029:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1242112-1242214:1:exon

position:1242214:1
position: 1242214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1243924-1244047:1:exon

position:1243924:1
position: 1243924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244047:1
position: 1244047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1244140-1244318:1:exon

position:1244140:1
position: 1244140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244318:1
position: 1244318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1244575-1244741:1:exon

position:1244575:1
position: 1244575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244741:1
position: 1244741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1245032-1245182:1:exon

position:1245032:1
position: 1245032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245182:1
position: 1245182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1245394-1245509:1:exon

position:1245394:1
position: 1245394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1245509:1
position: 1245509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1247096-1248029:1:exon

position:1247096:1
position: 1247096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL10RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IL10RA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-10 receptor subunit alpha
translation: MVPCATAPALCLALLLACLAHGEEGLASPRRVRFTTELAQHLLRWEPGHGCPGSARYDVELRVYGLSSPWAAIPECRNTSELSCDLTLYTLGPEQRYFARVRAVSGNLMSPWQRSSSFSPQQAGLHLAGQSLSVVGNSIQVRLQVLLLPGNVSLEYSDFQKAMAQFHVYVRRTRDNHTLTVVKNSTEFTIGELYWVTEYCLSVEPSMANRPVPATLSDEQCVTTGHRDRSAELLPAILSSSFIILLFLGLLGAHTYIRKPVRTPSVLKSFMKQSSLWVEHEPPSSGSLDADPIQQLFLCHKEPWLDRSPDSSSSTAQPPLEQGWELPARPKEQQCLLEPTGSRDSSGTSTDSGICLHIPSSSSSSLSCSVCPEPQGYRQQLPRAEDSGVGLERPCPAPGCSSGSSNASPGQPELSPAASQEDVAFRGYLQQSKGTVGPEQALDQGLSLSGRAGSLQGTDTVLDMQCSELAVSKGYLKQSSPQHLLTQDLAPWGPPAWDFSSQPQAPTLLSWAAPGAPLTSKASPDLKTPFDLNSTAFLGTLPLISSLSCSWITAPTNPLSQLSGDSKDSRL
SIO_010081: IL10RA
subclass of: SO_0000673
so part of: IL10RA
location: join(1242151..1242214,1243924..1244047,1244140..1244318,1244575..1244741,1245032..1245182,1245394..1245509,1247096..1248010)
location: region:1242151-1248010:1
so has part: feature:1242151-1242214:1:exon
so has part: feature:1243924-1244047:1:exon
so has part: feature:1244140-1244318:1:exon
so has part: feature:1244575-1244741:1:exon
so has part: feature:1245032-1245182:1:exon
so has part: feature:1245394-1245509:1:exon
so has part: feature:1247096-1248010:1:exon

XP_005058667.1
type: Protein
SIO_000068: ncbiprotein

position:1242151:1
position: 1242151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248010:1
position: 1248010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242151-1242214:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1243924-1244047:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1244140-1244318:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1244575-1244741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245032-1245182:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1245394-1245509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1247096-1248010:1:exon

TMPRSS4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TMPRSS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1259458..1269639
location: region:1259458-1269639:1
so has part: feature:1259458-1269639:1:exon
subclass of: SO_0000010

101817564
type: Gene
SIO_000068: ncbigene

position:1259458:1
position: 1259458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269639:1
position: 1269639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259458-1269639:1:exon

TMPRSS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMPRSS4
product: transmembrane protease, serine 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005058608.1
SIO_010081: TMPRSS4
subclass of: SO_0000673
so part of: TMPRSS4
location: join(1259458..1259821,1263132..1263162,1263244..1263357,1263474..1263626,1263712..1263841,1266314..1266415,1266499..1266539,1267595..1267754,1267879..1268045,1268228..1268555,1268688..1268837,1268974..1269639)
location: region:1259458-1269639:1
so has part: feature:1259458-1259821:1:exon
so has part: feature:1263132-1263162:1:exon
so has part: feature:1263244-1263357:1:exon
so has part: feature:1263474-1263626:1:exon
so has part: feature:1263712-1263841:1:exon
so has part: feature:1266314-1266415:1:exon
so has part: feature:1266499-1266539:1:exon
so has part: feature:1267595-1267754:1:exon
so has part: feature:1267879-1268045:1:exon
so has part: feature:1268228-1268555:1:exon
so has part: feature:1268688-1268837:1:exon
so has part: feature:1268974-1269639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259458-1259821:1:exon

position:1259821:1
position: 1259821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1263132-1263162:1:exon

position:1263132:1
position: 1263132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263162:1
position: 1263162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1263244-1263357:1:exon

position:1263244:1
position: 1263244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263357:1
position: 1263357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1263474-1263626:1:exon

position:1263474:1
position: 1263474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263626:1
position: 1263626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1263712-1263841:1:exon

position:1263712:1
position: 1263712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1263841:1
position: 1263841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1266314-1266415:1:exon

position:1266314:1
position: 1266314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266415:1
position: 1266415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1266499-1266539:1:exon

position:1266499:1
position: 1266499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266539:1
position: 1266539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1267595-1267754:1:exon

position:1267595:1
position: 1267595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267754:1
position: 1267754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1267879-1268045:1:exon

position:1267879:1
position: 1267879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268045:1
position: 1268045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1268228-1268555:1:exon

position:1268228:1
position: 1268228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268555:1
position: 1268555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1268688-1268837:1:exon

position:1268688:1
position: 1268688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268837:1
position: 1268837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1268974-1269639:1:exon

position:1268974:1
position: 1268974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMPRSS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMPRSS4
product: transmembrane protease, serine 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303867.1
SIO_010081: TMPRSS4
subclass of: SO_0000673
so part of: TMPRSS4
location: join(1259458..1259821,1263132..1263162,1263244..1263357,1263474..1263626,1263712..1263841,1266314..1266415,1266499..1266539,1267595..1267754,1267879..1268045,1268228..1268323,1268421..1268837,1268974..1269639)
location: region:1259458-1269639:1
so has part: feature:1259458-1259821:1:exon
so has part: feature:1263132-1263162:1:exon
so has part: feature:1263244-1263357:1:exon
so has part: feature:1263474-1263626:1:exon
so has part: feature:1263712-1263841:1:exon
so has part: feature:1266314-1266415:1:exon
so has part: feature:1266499-1266539:1:exon
so has part: feature:1267595-1267754:1:exon
so has part: feature:1267879-1268045:1:exon
so has part: feature:1268228-1268323:1:exon
so has part: feature:1268421-1268837:1:exon
so has part: feature:1268974-1269639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259458-1259821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1263132-1263162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1263244-1263357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1263474-1263626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1263712-1263841:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1266314-1266415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1266499-1266539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1267595-1267754:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267879-1268045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1268228-1268323:1:exon

position:1268323:1
position: 1268323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1268421-1268837:1:exon

position:1268421:1
position: 1268421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1268974-1269639:1:exon

TMPRSS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMPRSS4
product: transmembrane protease, serine 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303868.1
SIO_010081: TMPRSS4
subclass of: SO_0000673
so part of: TMPRSS4
location: join(1259458..1259821,1263132..1263162,1263244..1263357,1263474..1263626,1263712..1263841,1266314..1266415,1266499..1266539,1267595..1267754,1267879..1268045,1268228..1268323,1268421..1268555,1268688..1268837,1268974..1269639)
location: region:1259458-1269639:1
so has part: feature:1259458-1259821:1:exon
so has part: feature:1263132-1263162:1:exon
so has part: feature:1263244-1263357:1:exon
so has part: feature:1263474-1263626:1:exon
so has part: feature:1263712-1263841:1:exon
so has part: feature:1266314-1266415:1:exon
so has part: feature:1266499-1266539:1:exon
so has part: feature:1267595-1267754:1:exon
so has part: feature:1267879-1268045:1:exon
so has part: feature:1268228-1268323:1:exon
so has part: feature:1268421-1268555:1:exon
so has part: feature:1268688-1268837:1:exon
so has part: feature:1268974-1269639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259458-1259821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1263132-1263162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1263244-1263357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1263474-1263626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1263712-1263841:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1266314-1266415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1266499-1266539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1267595-1267754:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267879-1268045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1268228-1268323:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1268421-1268555:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1268688-1268837:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1268974-1269639:1:exon

TMPRSS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMPRSS4
product: transmembrane protease, serine 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005058609.1
SIO_010081: TMPRSS4
subclass of: SO_0000673
so part of: TMPRSS4
location: join(1259458..1259821,1263132..1263162,1263244..1263357,1263474..1263626,1263712..1263841,1266314..1266415,1266499..1266539,1267595..1267754,1267879..1268045,1268228..1268323,1268416..1268555,1268688..1268837,1268974..1269066)
location: region:1259458-1269066:1
so has part: feature:1259458-1259821:1:exon
so has part: feature:1263132-1263162:1:exon
so has part: feature:1263244-1263357:1:exon
so has part: feature:1263474-1263626:1:exon
so has part: feature:1263712-1263841:1:exon
so has part: feature:1266314-1266415:1:exon
so has part: feature:1266499-1266539:1:exon
so has part: feature:1267595-1267754:1:exon
so has part: feature:1267879-1268045:1:exon
so has part: feature:1268228-1268323:1:exon
so has part: feature:1268416-1268555:1:exon
so has part: feature:1268688-1268837:1:exon
so has part: feature:1268974-1269066:1:exon

position:1269066:1
position: 1269066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259458-1259821:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1263132-1263162:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1263244-1263357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1263474-1263626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1263712-1263841:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1266314-1266415:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1266499-1266539:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1267595-1267754:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1267879-1268045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1268228-1268323:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1268416-1268555:1:exon

position:1268416:1
position: 1268416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1268688-1268837:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1268974-1269066:1:exon

TMPRSS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TMPRSS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 4 isoform X2
translation: MLGRLPQVTELLIDRCCITIQTLIPVSQLPLWVLRRAGAALPQCERGVGTARRQRAAGASPAGSGLPCPAPGAFAGFPQAEGPRRSWMDMDSASERLNGRGPCTRPKSPRAQESFKRVGILVLAVVLTLACLVAIGFLVKIYLDHHYLFCKQPLKLVPLKQVCDGQLDCLQGEDEANCPQWVPEGPPAGARVSKDRSILQVLNSHTGAWACVCHDHFTPALARAACEEMGYSSTPAFQGVEVSEGQPLPPRELVLSNGSLQVLEPGRKCLSGLVVSLFCSTCGQSVRTPRVLGGSPAAIEAWPWQVSLQYRKEHICGGSIIGPGWVLTAAHCFKNNPIIQSWRVKAGSDLLSGAATLAVEKVFLAEVTPASPKDNDIALVKLRSPVHDSDSTKPICLPYFDEELVPGTPLWVIGWGYTEERGEWRGGDRDKAEPPQHCWQEQGPSERPCVTQGSCQSACSRPRWSSSTRGAATWPPTTAMSPTGCCVLACPRAAWTPARGTAAGPCCTQVGTGRWWASSAGARAAAPPAHLESTPASEPTWTGSRPCAGQSSETCRNRSLLAPSLPCHPSARALAAAGTWISSRGTSAEAPKPSLAAVI
SIO_010081: TMPRSS4
subclass of: SO_0000673
so part of: TMPRSS4
location: join(1259552..1259821,1263132..1263162,1263244..1263357,1263474..1263626,1263712..1263841,1266314..1266415,1266499..1266539,1267595..1267754,1267879..1268045,1268228..1268555,1268688..1268837,1268974..1269127)
location: region:1259552-1269127:1
so has part: feature:1259552-1259821:1:exon
so has part: feature:1263132-1263162:1:exon
so has part: feature:1263244-1263357:1:exon
so has part: feature:1263474-1263626:1:exon
so has part: feature:1263712-1263841:1:exon
so has part: feature:1266314-1266415:1:exon
so has part: feature:1266499-1266539:1:exon
so has part: feature:1267595-1267754:1:exon
so has part: feature:1267879-1268045:1:exon
so has part: feature:1268228-1268555:1:exon
so has part: feature:1268688-1268837:1:exon
so has part: feature:1268974-1269127:1:exon

XP_005058665.1
type: Protein
SIO_000068: ncbiprotein