Ficedula albicollis isolate OC2 chromosome 22, FicAlb1.5, whole genome shotgun sequence.
type: Entry
definition: Ficedula albicollis isolate OC2 chromosome 22, FicAlb1.5, whole genome shotgun sequence.
sequence version: NC_021693.1
sequence date: 2016-04-20
sequence: sequence
division: CON
label: NC_021693.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA208061
dblink: SAMN02981387
keyword: WGS
keyword: RefSeq
source: Ficedula albicollis (collared flycatcher)
organism: Ficedula albicollis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
reference: 1
references: 23103876
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002010.1.\nAssembly name: FicAlb1.5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Uppsala University on 2013/06/24.\nThe original whole-genome shotgun project has the accession\nAGTO00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: FicAlb1.5\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina GAII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Ficedula albicollis Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 5733621
topology: linear
so has quality: SO_0000987
location: 1..5733621
location: region:1-5733621:1
RO_0002162: 59894

NC_021693
type: RefSeq
SIO_000068: refseq

PRJNA208061
type: BioProject
SIO_000068: bioproject

SAMN02981387
type: BioSample
SIO_000068: biosample

1
title: The genomic landscape of species divergence in Ficedula flycatchers
author: Ellegren, H.
author: Smeds, L.
author: Burri, R.
author: Olason, P.I.
author: Backstrom, N.
author: Kawakami, T.
author: Kunstner, A.
author: Makinen, H.
author: Nadachowska-Brzyska, K.
author: Qvarnstrom, A.
author: Uebbing, S.
author: Wolf, J.B.
journal: Nature
volume: 491
issue: 7426
pages: 756-760
year: 2012
pubmed: 23103876

23103876
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5733621:1
position: 5733621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-5733621:1:source
so part of: sequence
organism: Ficedula albicollis
mol type: genomic DNA
isolate: OC2
chromosome: 22
sex: male
country: Sweden: Oland
collection date: 2009

59894
type: Taxonomy
SIO_000068: taxonomy

LOC101818012
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101818012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8842..20428)
location: region:8842-20428:-1
so has part: feature:8842-20428:-1:exon
subclass of: SO_0000010

101818012
type: Gene
SIO_000068: ncbigene

position:8842:-1
position: 8842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20428:-1
position: 20428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8842-20428:-1:exon

LOC101818012
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101818012
product: uncharacterized LOC101818012
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303632.1
SIO_010081: LOC101818012
subclass of: SO_0000673
so part of: LOC101818012
location: complement(join(8842..9943,10736..10910,11370..11477,13207..13305,13393..13464,13553..13624,14264..14365,14802..14900,15484..15555,20389..20428))
location: region:8842-20428:-1
so has part: feature:20389-20428:-1:exon
so has part: feature:15484-15555:-1:exon
so has part: feature:14802-14900:-1:exon
so has part: feature:14264-14365:-1:exon
so has part: feature:13553-13624:-1:exon
so has part: feature:13393-13464:-1:exon
so has part: feature:13207-13305:-1:exon
so has part: feature:11370-11477:-1:exon
so has part: feature:10736-10910:-1:exon
so has part: feature:8842-9943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20389-20428:-1:exon

position:20389:-1
position: 20389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15484-15555:-1:exon

position:15484:-1
position: 15484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15555:-1
position: 15555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14802-14900:-1:exon

position:14802:-1
position: 14802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14900:-1
position: 14900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14264-14365:-1:exon

position:14264:-1
position: 14264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14365:-1
position: 14365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13553-13624:-1:exon

position:13553:-1
position: 13553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13624:-1
position: 13624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13393-13464:-1:exon

position:13393:-1
position: 13393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13464:-1
position: 13464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13207-13305:-1:exon

position:13207:-1
position: 13207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13305:-1
position: 13305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11370-11477:-1:exon

position:11370:-1
position: 11370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11477:-1
position: 11477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10736-10910:-1:exon

position:10736:-1
position: 10736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10910:-1
position: 10910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8842-9943:-1:exon

position:9943:-1
position: 9943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101818012
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101818012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101818012
translation: MGNLEKLVYDSSNILERGGGAAGWKNEDVEDKKSLEASKLLDKMLGDLERRRVMKGKTLLKAEFPGGSSGSVSASAAGGEAMPVTGGEHSRKASPAAWLHEDLQSLEPPAGVSARRTFQGTLLVAPHKLGSHHRGLLRGSNKLKGDSKFLETSKDMDKMLGDLERRHEMDRKSLLKAALSGRSTGSVPAPGTRREEMPDSATEDVITETGIYAQDPVHLPRIVCPQDVRRSCMIGTVVTIFTAPVVLVCGYFGIRKLYEMRRMIKPTLV
SIO_010081: LOC101818012
subclass of: SO_0000673
so part of: LOC101818012
location: complement(join(9919..9943,10736..10910,11370..11477,13207..13305,13393..13464,13553..13624,14264..14365,14802..14900,15484..15541))
location: region:9919-15541:-1
so has part: feature:15484-15541:-1:exon
so has part: feature:14802-14900:-1:exon
so has part: feature:14264-14365:-1:exon
so has part: feature:13553-13624:-1:exon
so has part: feature:13393-13464:-1:exon
so has part: feature:13207-13305:-1:exon
so has part: feature:11370-11477:-1:exon
so has part: feature:10736-10910:-1:exon
so has part: feature:9919-9943:-1:exon

XP_016159118.1
type: Protein
SIO_000068: ncbiprotein

position:9919:-1
position: 9919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15541:-1
position: 15541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15484-15541:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14802-14900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14264-14365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13553-13624:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13393-13464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13207-13305:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11370-11477:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10736-10910:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9919-9943:-1:exon

LOC101816789
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101816789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23171..33700)
location: region:23171-33700:-1
so has part: feature:23171-33700:-1:exon
subclass of: SO_0000010

101816789
type: Gene
SIO_000068: ncbigene

position:23171:-1
position: 23171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33700:-1
position: 33700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23171-33700:-1:exon

LOC101816789
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101816789
product: steroid 21-hydroxylase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005057971.1
SIO_010081: LOC101816789
subclass of: SO_0000673
so part of: LOC101816789
location: complement(join(23171..23190,23569..23699,24239..24371,24894..24997,26064..26254,27039..27224,27575..27661,28379..28486,28763..28858,29278..29429,30297..30503,33463..33700))
location: region:23171-33700:-1
so has part: feature:33463-33700:-1:exon
so has part: feature:30297-30503:-1:exon
so has part: feature:29278-29429:-1:exon
so has part: feature:28763-28858:-1:exon
so has part: feature:28379-28486:-1:exon
so has part: feature:27575-27661:-1:exon
so has part: feature:27039-27224:-1:exon
so has part: feature:26064-26254:-1:exon
so has part: feature:24894-24997:-1:exon
so has part: feature:24239-24371:-1:exon
so has part: feature:23569-23699:-1:exon
so has part: feature:23171-23190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:33463-33700:-1:exon

position:33463:-1
position: 33463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30297-30503:-1:exon

position:30297:-1
position: 30297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30503:-1
position: 30503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29278-29429:-1:exon

position:29278:-1
position: 29278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29429:-1
position: 29429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28763-28858:-1:exon

position:28763:-1
position: 28763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28858:-1
position: 28858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:28379-28486:-1:exon

position:28379:-1
position: 28379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28486:-1
position: 28486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:27575-27661:-1:exon

position:27575:-1
position: 27575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27661:-1
position: 27661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:27039-27224:-1:exon

position:27039:-1
position: 27039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27224:-1
position: 27224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:26064-26254:-1:exon

position:26064:-1
position: 26064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26254:-1
position: 26254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:24894-24997:-1:exon

position:24894:-1
position: 24894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24997:-1
position: 24997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:24239-24371:-1:exon

position:24239:-1
position: 24239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24371:-1
position: 24371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:23569-23699:-1:exon

position:23569:-1
position: 23569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23699:-1
position: 23699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:23171-23190:-1:exon

position:23190:-1
position: 23190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101816789
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101816789
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroid 21-hydroxylase-like
translation: MTTGTTTLGQPPPDTFTSRILLGALRDPMLRRPPPGTPFYNAPPEDPHHGVSPLESPKTPPAIHPKMGVPFLTSAPSDYCPNPPDAFPKIPRQDSPLGLGPPSPPKFWGPVQPLLFPAEVLVPSSVGTIREALVRHWGDWLGRPSSYLGSLVSRGGRDLALGGPCPGWRQQRGAVRGALARAGGRLGPLLWLQGQELCEELRSHGEAPLDPSEVFTFHTCSTIARLLFGDLVPPPGELRAFSRCLGELLQVWGRSSVQVLDLLPLLRALPNPGLRKLLQLVQHRDAFVEAQIQRHQACPSPPVDTVLGALLGRNSGARGGPLSPPRLHMALVDLFIGGTETTAAALGWAVAFLLHRPETQHTCAPPVQLQARLRAELEGAQGPPGPGDMGRLPLLQATVSETLRLRPPAPLALPHCALRHTSLGGLPVVAGTVLVPNLLAAQQDPDIWQHPEVFLPERFLAPGAPARSLLPFGCGARSCPGEGLARAELFVFLGLILREFRVSAEREDPIYLLPVKFILLTPSCKSRVFLEPPKLRNLSPVYMDFLSFPL
SIO_010081: LOC101816789
subclass of: SO_0000673
so part of: LOC101816789
location: complement(join(23171..23190,23569..23699,24239..24371,24894..24997,26064..26254,27039..27224,27575..27661,28379..28486,28763..28858,29278..29429,30297..30503,33463..33700))
location: region:23171-33700:-1
so has part: feature:33463-33700:-1:exon
so has part: feature:30297-30503:-1:exon
so has part: feature:29278-29429:-1:exon
so has part: feature:28763-28858:-1:exon
so has part: feature:28379-28486:-1:exon
so has part: feature:27575-27661:-1:exon
so has part: feature:27039-27224:-1:exon
so has part: feature:26064-26254:-1:exon
so has part: feature:24894-24997:-1:exon
so has part: feature:24239-24371:-1:exon
so has part: feature:23569-23699:-1:exon
so has part: feature:23171-23190:-1:exon

XP_005058028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33463-33700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30297-30503:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:29278-29429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28763-28858:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28379-28486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27575-27661:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27039-27224:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:26064-26254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24894-24997:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24239-24371:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:23569-23699:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:23171-23190:-1:exon

PPIA
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PPIA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38619..39678)
location: region:38619-39678:-1
so has part: feature:38619-39678:-1:exon
subclass of: SO_0000010

101818201
type: Gene
SIO_000068: ncbigene

position:38619:-1
position: 38619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39678:-1
position: 39678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38619-39678:-1:exon

PPIA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PPIA
product: peptidylprolyl isomerase A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303597.1
SIO_010081: PPIA
subclass of: SO_0000673
so part of: PPIA
location: complement(join(38619..38921,39025..39197,39375..39463,39574..39678))
location: region:38619-39678:-1
so has part: feature:39574-39678:-1:exon
so has part: feature:39375-39463:-1:exon
so has part: feature:39025-39197:-1:exon
so has part: feature:38619-38921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39574-39678:-1:exon

position:39574:-1
position: 39574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39375-39463:-1:exon

position:39375:-1
position: 39375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39463:-1
position: 39463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39025-39197:-1:exon

position:39025:-1
position: 39025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39197:-1
position: 39197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38619-38921:-1:exon

position:38921:-1
position: 38921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPIA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PPIA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase A
translation: MSSQLFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFPDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEGMNVVEAMERCGSKDGKTSKKITITDCGQLS
SIO_010081: PPIA
subclass of: SO_0000673
so part of: PPIA
location: complement(join(38786..38921,39025..39197,39375..39463,39574..39616))
location: region:38786-39616:-1
so has part: feature:39574-39616:-1:exon
so has part: feature:39375-39463:-1:exon
so has part: feature:39025-39197:-1:exon
so has part: feature:38786-38921:-1:exon

XP_016159083.1
type: Protein
SIO_000068: ncbiprotein

position:38786:-1
position: 38786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39616:-1
position: 39616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39574-39616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39375-39463:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39025-39197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38786-38921:-1:exon

ZMIZ2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ZMIZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41805..48329)
location: region:41805-48329:-1
so has part: feature:41805-48329:-1:exon
subclass of: SO_0000010

101817169
type: Gene
SIO_000068: ncbigene

position:41805:-1
position: 41805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48329:-1
position: 48329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41805-48329:-1:exon

ZMIZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZMIZ2
product: zinc finger MIZ-type containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303532.1
SIO_010081: ZMIZ2
subclass of: SO_0000673
so part of: ZMIZ2
location: complement(join(41805..42305,42422..42634,42756..42931,43012..43256,43367..43435,44215..44282,44368..44525,44669..44774,44849..45059,45498..45642,46246..46417,46492..46557,46649..46822,46899..47153,47235..47270,47355..47478,47564..47766,47855..47969,48178..48329))
location: region:41805-48329:-1
so has part: feature:48178-48329:-1:exon
so has part: feature:47855-47969:-1:exon
so has part: feature:47564-47766:-1:exon
so has part: feature:47355-47478:-1:exon
so has part: feature:47235-47270:-1:exon
so has part: feature:46899-47153:-1:exon
so has part: feature:46649-46822:-1:exon
so has part: feature:46492-46557:-1:exon
so has part: feature:46246-46417:-1:exon
so has part: feature:45498-45642:-1:exon
so has part: feature:44849-45059:-1:exon
so has part: feature:44669-44774:-1:exon
so has part: feature:44368-44525:-1:exon
so has part: feature:44215-44282:-1:exon
so has part: feature:43367-43435:-1:exon
so has part: feature:43012-43256:-1:exon
so has part: feature:42756-42931:-1:exon
so has part: feature:42422-42634:-1:exon
so has part: feature:41805-42305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48178-48329:-1:exon

position:48178:-1
position: 48178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47855-47969:-1:exon

position:47855:-1
position: 47855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47969:-1
position: 47969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:47564-47766:-1:exon

position:47564:-1
position: 47564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47766:-1
position: 47766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47355-47478:-1:exon

position:47355:-1
position: 47355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47478:-1
position: 47478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47235-47270:-1:exon

position:47235:-1
position: 47235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47270:-1
position: 47270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:46899-47153:-1:exon

position:46899:-1
position: 46899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47153:-1
position: 47153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:46649-46822:-1:exon

position:46649:-1
position: 46649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46822:-1
position: 46822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:46492-46557:-1:exon

position:46492:-1
position: 46492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46557:-1
position: 46557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:46246-46417:-1:exon

position:46246:-1
position: 46246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46417:-1
position: 46417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:45498-45642:-1:exon

position:45498:-1
position: 45498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45642:-1
position: 45642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:44849-45059:-1:exon

position:44849:-1
position: 44849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45059:-1
position: 45059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:44669-44774:-1:exon

position:44669:-1
position: 44669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44774:-1
position: 44774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:44368-44525:-1:exon

position:44368:-1
position: 44368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44525:-1
position: 44525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:44215-44282:-1:exon

position:44215:-1
position: 44215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44282:-1
position: 44282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:43367-43435:-1:exon

position:43367:-1
position: 43367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43435:-1
position: 43435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:43012-43256:-1:exon

position:43012:-1
position: 43012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43256:-1
position: 43256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:42756-42931:-1:exon

position:42756:-1
position: 42756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42931:-1
position: 42931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:42422-42634:-1:exon

position:42422:-1
position: 42422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42634:-1
position: 42634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:41805-42305:-1:exon

position:42305:-1
position: 42305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMIZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZMIZ2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MIZ domain-containing protein 2
translation: MSSMNPMKPSLPPAPHGDGSFAYEAVPWQPSTNQPPGSLSVVTTVWGVSNPSQSQVFGSPMGPGGSSSNTPLMPGMAGTGSGMSSPPFLPQQPFAEGAPGKGYVQPSVYGRNAYPSGPGFTASYNGGPNGPGGMGLPSHASRATADFTQAAAAAAVAAAAPPPPEKQSQELSQYSAMGTGQSFSSQFLPHAGPRGPNSMSPAGMAGVVAPSGVSPVSMSPVRAPGAGPLYGGQRVPQHTYTGSSQSQQLPRQGLKRAYSNEGYPAQQYLQGGQYTAAGAQYGPSAPQSSAPSPSYPGHRLQQSMGQYLSASGSAGPYYKPADQFNGQSTSFSTYSQAAINGPGRSLPGYPSSPLAGNPTPPMMPGSGIPAYASPGQDVKSPFLADMKPSVAPLHPSPSGPAPGEELRLTFPVRDGVVLEPFRLQHNLAVSNHVFQLRDSVYKTLMMRPDLELQFKCYHHEDRQMNTNWPASVQVSVNATPLTIERGDNKTSHKPLYLKHVCQPGRNTIQITVTACCCSHLFVLQLVHRPSVRSVLQGLIKKRLLPAEHCITKIKRNFSSGTIPGTPGPNGEDGVEQTAIKVSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGTWRCPVCNKTALLEGLEVDQYMLGILIYIQNSEHEEITIDPTCSWKPVPIKPDVHIKEEPEGPALKRCRTLSPAHMVLPNIMEMIAALGPGSVPFPALSQPPVGAATDYGTPGSSFLGPGGFPEPFAAPGVPGTSTLSDFTPGPPSISYQPNIPGGLLAPEKPPVPPLPAQLPPPGRMEPSHPAVQTGLHSTPSGSQPASMLHSRSTVARQPLGPQAHAADLVFPPAPSMASAGDGSEPSLDLLPELTNPDELLSYLGPPDLPSSSNDDLLSLFENN
SIO_010081: ZMIZ2
subclass of: SO_0000673
so part of: ZMIZ2
location: complement(join(42198..42305,42422..42634,42756..42931,43012..43256,43367..43435,44215..44282,44368..44525,44669..44774,44849..45059,45498..45642,46246..46417,46492..46557,46649..46822,46899..47153,47235..47270,47355..47478,47564..47766,47855..47969,48178..48227))
location: region:42198-48227:-1
so has part: feature:48178-48227:-1:exon
so has part: feature:47855-47969:-1:exon
so has part: feature:47564-47766:-1:exon
so has part: feature:47355-47478:-1:exon
so has part: feature:47235-47270:-1:exon
so has part: feature:46899-47153:-1:exon
so has part: feature:46649-46822:-1:exon
so has part: feature:46492-46557:-1:exon
so has part: feature:46246-46417:-1:exon
so has part: feature:45498-45642:-1:exon
so has part: feature:44849-45059:-1:exon
so has part: feature:44669-44774:-1:exon
so has part: feature:44368-44525:-1:exon
so has part: feature:44215-44282:-1:exon
so has part: feature:43367-43435:-1:exon
so has part: feature:43012-43256:-1:exon
so has part: feature:42756-42931:-1:exon
so has part: feature:42422-42634:-1:exon
so has part: feature:42198-42305:-1:exon

XP_016159018.1
type: Protein
SIO_000068: ncbiprotein

position:42198:-1
position: 42198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48227:-1
position: 48227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48178-48227:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47855-47969:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47564-47766:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47355-47478:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47235-47270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46899-47153:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46649-46822:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46492-46557:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:46246-46417:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:45498-45642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44849-45059:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:44669-44774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:44368-44525:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:44215-44282:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:43367-43435:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:43012-43256:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:42756-42931:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:42422-42634:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:42198-42305:-1:exon

OGDH
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(54365..81382)
location: region:54365-81382:-1
so has part: feature:54365-81382:-1:exon
subclass of: SO_0000010

101818406
type: Gene
SIO_000068: ncbigene

position:54365:-1
position: 54365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81382:-1
position: 81382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54365-81382:-1:exon

OGDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: OGDH
product: oxoglutarate dehydrogenase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005057886.2
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(54365..54582,54666..54820,54909..55072,55508..55580,56167..56289,56756..56827,56973..57151,57239..57366,57459..57609,58516..58644,58860..58962,59628..59780,59950..60129,60667..60795,61834..62013,62889..62979,63445..63591,64014..64168,65303..65418,73570..73672,75783..75971,81113..81382))
location: region:54365-81382:-1
so has part: feature:81113-81382:-1:exon
so has part: feature:75783-75971:-1:exon
so has part: feature:73570-73672:-1:exon
so has part: feature:65303-65418:-1:exon
so has part: feature:64014-64168:-1:exon
so has part: feature:63445-63591:-1:exon
so has part: feature:62889-62979:-1:exon
so has part: feature:61834-62013:-1:exon
so has part: feature:60667-60795:-1:exon
so has part: feature:59950-60129:-1:exon
so has part: feature:59628-59780:-1:exon
so has part: feature:58860-58962:-1:exon
so has part: feature:58516-58644:-1:exon
so has part: feature:57459-57609:-1:exon
so has part: feature:57239-57366:-1:exon
so has part: feature:56973-57151:-1:exon
so has part: feature:56756-56827:-1:exon
so has part: feature:56167-56289:-1:exon
so has part: feature:55508-55580:-1:exon
so has part: feature:54909-55072:-1:exon
so has part: feature:54666-54820:-1:exon
so has part: feature:54365-54582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81113-81382:-1:exon

position:81113:-1
position: 81113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:75783-75971:-1:exon

position:75783:-1
position: 75783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75971:-1
position: 75971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:73570-73672:-1:exon

position:73570:-1
position: 73570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73672:-1
position: 73672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:65303-65418:-1:exon

position:65303:-1
position: 65303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65418:-1
position: 65418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64014-64168:-1:exon

position:64014:-1
position: 64014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64168:-1
position: 64168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:63445-63591:-1:exon

position:63445:-1
position: 63445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63591:-1
position: 63591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62889-62979:-1:exon

position:62889:-1
position: 62889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62979:-1
position: 62979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:61834-62013:-1:exon

position:61834:-1
position: 61834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62013:-1
position: 62013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:60667-60795:-1:exon

position:60667:-1
position: 60667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60795:-1
position: 60795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:59950-60129:-1:exon

position:59950:-1
position: 59950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60129:-1
position: 60129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:59628-59780:-1:exon

position:59628:-1
position: 59628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59780:-1
position: 59780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:58860-58962:-1:exon

position:58860:-1
position: 58860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58962:-1
position: 58962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:58516-58644:-1:exon

position:58516:-1
position: 58516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58644:-1
position: 58644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:57459-57609:-1:exon

position:57459:-1
position: 57459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57609:-1
position: 57609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:57239-57366:-1:exon

position:57239:-1
position: 57239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57366:-1
position: 57366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:56973-57151:-1:exon

position:56973:-1
position: 56973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57151:-1
position: 57151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:56756-56827:-1:exon

position:56756:-1
position: 56756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56827:-1
position: 56827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:56167-56289:-1:exon

position:56167:-1
position: 56167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56289:-1
position: 56289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:55508-55580:-1:exon

position:55508:-1
position: 55508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55580:-1
position: 55580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:54909-55072:-1:exon

position:54909:-1
position: 54909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55072:-1
position: 55072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:54666-54820:-1:exon

position:54666:-1
position: 54666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54820:-1
position: 54820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:54365-54582:-1:exon

position:54582:-1
position: 54582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OGDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: OGDH
product: oxoglutarate dehydrogenase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005057885.2
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(54365..54582,54666..54820,54909..55072,55508..55580,56167..56289,56756..56827,56973..57151,57239..57366,57459..57609,58516..58644,58860..58962,59628..59780,59950..60129,60667..60795,61834..62013,62889..62979,63445..63591,64014..64168,65303..65418,67795..67839,73570..73672,75783..75971,81113..81382))
location: region:54365-81382:-1
so has part: feature:81113-81382:-1:exon
so has part: feature:75783-75971:-1:exon
so has part: feature:73570-73672:-1:exon
so has part: feature:67795-67839:-1:exon
so has part: feature:65303-65418:-1:exon
so has part: feature:64014-64168:-1:exon
so has part: feature:63445-63591:-1:exon
so has part: feature:62889-62979:-1:exon
so has part: feature:61834-62013:-1:exon
so has part: feature:60667-60795:-1:exon
so has part: feature:59950-60129:-1:exon
so has part: feature:59628-59780:-1:exon
so has part: feature:58860-58962:-1:exon
so has part: feature:58516-58644:-1:exon
so has part: feature:57459-57609:-1:exon
so has part: feature:57239-57366:-1:exon
so has part: feature:56973-57151:-1:exon
so has part: feature:56756-56827:-1:exon
so has part: feature:56167-56289:-1:exon
so has part: feature:55508-55580:-1:exon
so has part: feature:54909-55072:-1:exon
so has part: feature:54666-54820:-1:exon
so has part: feature:54365-54582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81113-81382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75783-75971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73570-73672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67795-67839:-1:exon

position:67795:-1
position: 67795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67839:-1
position: 67839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:65303-65418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64014-64168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63445-63591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62889-62979:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61834-62013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60667-60795:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59950-60129:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:59628-59780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58860-58962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:58516-58644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:57459-57609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:57239-57366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56973-57151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:56756-56827:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:56167-56289:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:55508-55580:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:54909-55072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:54666-54820:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:54365-54582:-1:exon

OGDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: OGDH
product: oxoglutarate dehydrogenase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005057887.2
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(54365..54582,54666..54820,54909..55072,55508..55580,56167..56289,56756..56827,56973..57151,57239..57366,57459..57609,58516..58644,58860..58962,59628..59780,59950..60129,60667..60795,61834..62013,62889..62979,63445..63591,64014..64168,65303..65418,73791..73881,75783..75971,81113..81382))
location: region:54365-81382:-1
so has part: feature:81113-81382:-1:exon
so has part: feature:75783-75971:-1:exon
so has part: feature:73791-73881:-1:exon
so has part: feature:65303-65418:-1:exon
so has part: feature:64014-64168:-1:exon
so has part: feature:63445-63591:-1:exon
so has part: feature:62889-62979:-1:exon
so has part: feature:61834-62013:-1:exon
so has part: feature:60667-60795:-1:exon
so has part: feature:59950-60129:-1:exon
so has part: feature:59628-59780:-1:exon
so has part: feature:58860-58962:-1:exon
so has part: feature:58516-58644:-1:exon
so has part: feature:57459-57609:-1:exon
so has part: feature:57239-57366:-1:exon
so has part: feature:56973-57151:-1:exon
so has part: feature:56756-56827:-1:exon
so has part: feature:56167-56289:-1:exon
so has part: feature:55508-55580:-1:exon
so has part: feature:54909-55072:-1:exon
so has part: feature:54666-54820:-1:exon
so has part: feature:54365-54582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81113-81382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75783-75971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73791-73881:-1:exon

position:73791:-1
position: 73791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73881:-1
position: 73881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:65303-65418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64014-64168:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63445-63591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62889-62979:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61834-62013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60667-60795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:59950-60129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59628-59780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58860-58962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58516-58644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:57459-57609:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:57239-57366:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:56973-57151:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56756-56827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:56167-56289:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:55508-55580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:54909-55072:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:54666-54820:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:54365-54582:-1:exon

OGDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: OGDH
product: oxoglutarate dehydrogenase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005057884.2
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(54365..54582,54666..54820,54909..55072,55508..55580,56167..56289,56756..56827,56973..57151,57239..57366,57459..57609,58516..58644,58860..58962,59628..59780,59950..60129,60667..60795,61834..62013,62889..62979,63445..63591,64014..64168,65303..65418,67795..67839,73791..73881,75783..75971,81113..81382))
location: region:54365-81382:-1
so has part: feature:81113-81382:-1:exon
so has part: feature:75783-75971:-1:exon
so has part: feature:73791-73881:-1:exon
so has part: feature:67795-67839:-1:exon
so has part: feature:65303-65418:-1:exon
so has part: feature:64014-64168:-1:exon
so has part: feature:63445-63591:-1:exon
so has part: feature:62889-62979:-1:exon
so has part: feature:61834-62013:-1:exon
so has part: feature:60667-60795:-1:exon
so has part: feature:59950-60129:-1:exon
so has part: feature:59628-59780:-1:exon
so has part: feature:58860-58962:-1:exon
so has part: feature:58516-58644:-1:exon
so has part: feature:57459-57609:-1:exon
so has part: feature:57239-57366:-1:exon
so has part: feature:56973-57151:-1:exon
so has part: feature:56756-56827:-1:exon
so has part: feature:56167-56289:-1:exon
so has part: feature:55508-55580:-1:exon
so has part: feature:54909-55072:-1:exon
so has part: feature:54666-54820:-1:exon
so has part: feature:54365-54582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:81113-81382:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75783-75971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73791-73881:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67795-67839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65303-65418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64014-64168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63445-63591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62889-62979:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61834-62013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60667-60795:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59950-60129:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:59628-59780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58860-58962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:58516-58644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:57459-57609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:57239-57366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56973-57151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:56756-56827:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:56167-56289:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:55508-55580:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:54909-55072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:54666-54820:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:54365-54582:-1:exon

OGDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoglutarate dehydrogenase, mitochondrial isoform X2
translation: MLNLRTCAAKLRPLTASQTVKTISQHRPAAPRTFQQLRCYSAPVAAEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGAAPGTAYQSPPPLTTSLSTLSQAQSLVQAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSLPADIITSTDKLGFYGLDESDLDKVFHLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFLRVIPDSGPAAQNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDTAFNLDAFKDMA
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(54462..54582,54666..54820,54909..55072,55508..55580,56167..56289,56756..56827,56973..57151,57239..57366,57459..57609,58516..58644,58860..58962,59628..59780,59950..60129,60667..60795,61834..62013,62889..62979,63445..63591,64014..64168,65303..65418,73570..73672,75783..75971,81113..81334))
location: region:54462-81334:-1
so has part: feature:81113-81334:-1:exon
so has part: feature:75783-75971:-1:exon
so has part: feature:73570-73672:-1:exon
so has part: feature:65303-65418:-1:exon
so has part: feature:64014-64168:-1:exon
so has part: feature:63445-63591:-1:exon
so has part: feature:62889-62979:-1:exon
so has part: feature:61834-62013:-1:exon
so has part: feature:60667-60795:-1:exon
so has part: feature:59950-60129:-1:exon
so has part: feature:59628-59780:-1:exon
so has part: feature:58860-58962:-1:exon
so has part: feature:58516-58644:-1:exon
so has part: feature:57459-57609:-1:exon
so has part: feature:57239-57366:-1:exon
so has part: feature:56973-57151:-1:exon
so has part: feature:56756-56827:-1:exon
so has part: feature:56167-56289:-1:exon
so has part: feature:55508-55580:-1:exon
so has part: feature:54909-55072:-1:exon
so has part: feature:54666-54820:-1:exon
so has part: feature:54462-54582:-1:exon

XP_005057943.1
type: Protein
SIO_000068: ncbiprotein

position:54462:-1
position: 54462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81334:-1
position: 81334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81113-81334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75783-75971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73570-73672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65303-65418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64014-64168:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63445-63591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62889-62979:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61834-62013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60667-60795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:59950-60129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59628-59780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58860-58962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58516-58644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:57459-57609:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:57239-57366:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:56973-57151:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56756-56827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:56167-56289:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:55508-55580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:54909-55072:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:54666-54820:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:54462-54582:-1:exon

OGDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoglutarate dehydrogenase, mitochondrial isoform X4
translation: MLNLRTCAAKLRPLTASQTVKTISQHRPAAPRTFQQLRCYSAPVAAEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGAAPGTAYQSPPPLTTSLSTLSQAQSLVQAQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSSLPADIITSTDKLDLAVFKERLRVLTVGGFYGLDESDLDKVFHLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFLRVIPDSGPAAQNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDTAFNLDAFKDMA
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(54462..54582,54666..54820,54909..55072,55508..55580,56167..56289,56756..56827,56973..57151,57239..57366,57459..57609,58516..58644,58860..58962,59628..59780,59950..60129,60667..60795,61834..62013,62889..62979,63445..63591,64014..64168,65303..65418,67795..67839,73570..73672,75783..75971,81113..81334))
location: region:54462-81334:-1
so has part: feature:81113-81334:-1:exon
so has part: feature:75783-75971:-1:exon
so has part: feature:73570-73672:-1:exon
so has part: feature:67795-67839:-1:exon
so has part: feature:65303-65418:-1:exon
so has part: feature:64014-64168:-1:exon
so has part: feature:63445-63591:-1:exon
so has part: feature:62889-62979:-1:exon
so has part: feature:61834-62013:-1:exon
so has part: feature:60667-60795:-1:exon
so has part: feature:59950-60129:-1:exon
so has part: feature:59628-59780:-1:exon
so has part: feature:58860-58962:-1:exon
so has part: feature:58516-58644:-1:exon
so has part: feature:57459-57609:-1:exon
so has part: feature:57239-57366:-1:exon
so has part: feature:56973-57151:-1:exon
so has part: feature:56756-56827:-1:exon
so has part: feature:56167-56289:-1:exon
so has part: feature:55508-55580:-1:exon
so has part: feature:54909-55072:-1:exon
so has part: feature:54666-54820:-1:exon
so has part: feature:54462-54582:-1:exon

XP_005057942.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81113-81334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75783-75971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73570-73672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67795-67839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65303-65418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64014-64168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63445-63591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62889-62979:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61834-62013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60667-60795:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59950-60129:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:59628-59780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58860-58962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:58516-58644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:57459-57609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:57239-57366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56973-57151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:56756-56827:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:56167-56289:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:55508-55580:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:54909-55072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:54666-54820:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:54462-54582:-1:exon

OGDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoglutarate dehydrogenase, mitochondrial isoform X3
translation: MLNLRTCAAKLRPLTASQTVKTISQHRPAAPRTFQQLRCYSAPVAAEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGAAPGTAYQSPPPLTTSLSTLSQAQSLVQAQPNVDKLVEDHLAVQSLIRAYQVRGHHIAKLDPLGISCVNFDDAPVTVSPNVGFYGLDESDLDKVFHLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFLRVIPDSGPAAQNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDTAFNLDAFKDMA
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(54462..54582,54666..54820,54909..55072,55508..55580,56167..56289,56756..56827,56973..57151,57239..57366,57459..57609,58516..58644,58860..58962,59628..59780,59950..60129,60667..60795,61834..62013,62889..62979,63445..63591,64014..64168,65303..65418,73791..73881,75783..75971,81113..81334))
location: region:54462-81334:-1
so has part: feature:81113-81334:-1:exon
so has part: feature:75783-75971:-1:exon
so has part: feature:73791-73881:-1:exon
so has part: feature:65303-65418:-1:exon
so has part: feature:64014-64168:-1:exon
so has part: feature:63445-63591:-1:exon
so has part: feature:62889-62979:-1:exon
so has part: feature:61834-62013:-1:exon
so has part: feature:60667-60795:-1:exon
so has part: feature:59950-60129:-1:exon
so has part: feature:59628-59780:-1:exon
so has part: feature:58860-58962:-1:exon
so has part: feature:58516-58644:-1:exon
so has part: feature:57459-57609:-1:exon
so has part: feature:57239-57366:-1:exon
so has part: feature:56973-57151:-1:exon
so has part: feature:56756-56827:-1:exon
so has part: feature:56167-56289:-1:exon
so has part: feature:55508-55580:-1:exon
so has part: feature:54909-55072:-1:exon
so has part: feature:54666-54820:-1:exon
so has part: feature:54462-54582:-1:exon

XP_005057944.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81113-81334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75783-75971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73791-73881:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:65303-65418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:64014-64168:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:63445-63591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62889-62979:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61834-62013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:60667-60795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:59950-60129:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59628-59780:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:58860-58962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58516-58644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:57459-57609:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:57239-57366:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:56973-57151:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56756-56827:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:56167-56289:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:55508-55580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:54909-55072:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:54666-54820:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:54462-54582:-1:exon

OGDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: OGDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-oxoglutarate dehydrogenase, mitochondrial isoform X1
translation: MLNLRTCAAKLRPLTASQTVKTISQHRPAAPRTFQQLRCYSAPVAAEPFLSGTSSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGAAPGTAYQSPPPLTTSLSTLSQAQSLVQAQPNVDKLVEDHLAVQSLIRAYQVRGHHIAKLDPLGISCVNFDDAPVTVSPNVDLAVFKERLRVLTVGGFYGLDESDLDKVFHLPTTTFIGGNESALPLREIIRRLEMAYCQHIGVEFMFINDLEQCQWIRQKFETPGIMQFTNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSEKGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVVYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLISQGVVNQPEYEEEIAKYDKICEEAHARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLNEEDLTHIGQVASSVPVEDFTIHGGLSRILKTRGEMVKNRTVDWALAEYMAFGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVFPKLDDFDVRQLYECNWIVVNCSTPANFFHVLRRQILLPFRKPLIIFTPKSLLRHPEARSSFDEMLPGTHFLRVIPDSGPAAQNPEQVKRVLFCTGKVYYDLTRERKARQMEADVAITRVEQLSPFPFDLLQREAQKYPAAELVWCQEEHKNQGYYDYVKPRLRTTINRAKPVWYAGREPAAAPATGNKKTHLTELQRLLDTAFNLDAFKDMA
SIO_010081: OGDH
subclass of: SO_0000673
so part of: OGDH
location: complement(join(54462..54582,54666..54820,54909..55072,55508..55580,56167..56289,56756..56827,56973..57151,57239..57366,57459..57609,58516..58644,58860..58962,59628..59780,59950..60129,60667..60795,61834..62013,62889..62979,63445..63591,64014..64168,65303..65418,67795..67839,73791..73881,75783..75971,81113..81334))
location: region:54462-81334:-1
so has part: feature:81113-81334:-1:exon
so has part: feature:75783-75971:-1:exon
so has part: feature:73791-73881:-1:exon
so has part: feature:67795-67839:-1:exon
so has part: feature:65303-65418:-1:exon
so has part: feature:64014-64168:-1:exon
so has part: feature:63445-63591:-1:exon
so has part: feature:62889-62979:-1:exon
so has part: feature:61834-62013:-1:exon
so has part: feature:60667-60795:-1:exon
so has part: feature:59950-60129:-1:exon
so has part: feature:59628-59780:-1:exon
so has part: feature:58860-58962:-1:exon
so has part: feature:58516-58644:-1:exon
so has part: feature:57459-57609:-1:exon
so has part: feature:57239-57366:-1:exon
so has part: feature:56973-57151:-1:exon
so has part: feature:56756-56827:-1:exon
so has part: feature:56167-56289:-1:exon
so has part: feature:55508-55580:-1:exon
so has part: feature:54909-55072:-1:exon
so has part: feature:54666-54820:-1:exon
so has part: feature:54462-54582:-1:exon

XP_005057941.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:81113-81334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75783-75971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73791-73881:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:67795-67839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:65303-65418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:64014-64168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:63445-63591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:62889-62979:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61834-62013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60667-60795:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:59950-60129:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:59628-59780:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58860-58962:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:58516-58644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:57459-57609:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:57239-57366:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:56973-57151:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:56756-56827:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:56167-56289:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:55508-55580:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:54909-55072:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:54666-54820:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:54462-54582:-1:exon

LOC101819115
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101819115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 87700..89246
location: region:87700-89246:1
so has part: feature:87700-89246:1:exon
subclass of: SO_0000010

101819115
type: Gene
SIO_000068: ncbigene

position:87700:1
position: 87700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89246:1
position: 89246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87700-89246:1:exon

LOC101819115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101819115
product: interleukin-1 beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016303595.1
SIO_010081: LOC101819115
subclass of: SO_0000673
so part of: LOC101819115
location: join(87700..87935,88021..88069,88151..88613,88723..88868,88956..89246)
location: region:87700-89246:1
so has part: feature:87700-87935:1:exon
so has part: feature:88021-88069:1:exon
so has part: feature:88151-88613:1:exon
so has part: feature:88723-88868:1:exon
so has part: feature:88956-89246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87700-87935:1:exon

position:87935:1
position: 87935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88021-88069:1:exon

position:88021:1
position: 88021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88069:1
position: 88069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88151-88613:1:exon

position:88151:1
position: 88151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88613:1
position: 88613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88723-88868:1:exon

position:88723:1
position: 88723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88868:1
position: 88868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88956-89246:1:exon

position:88956:1
position: 88956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101819115
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101819115
product: interleukin-1 beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005057889.1
SIO_010081: LOC101819115
subclass of: SO_0000673
so part of: LOC101819115
location: join(87700..87935,88021..88069,88151..88340,88443..88613,88723..88868,88956..89246)
location: region:87700-89246:1
so has part: feature:87700-87935:1:exon
so has part: feature:88021-88069:1:exon
so has part: feature:88151-88340:1:exon
so has part: feature:88443-88613:1:exon
so has part: feature:88723-88868:1:exon
so has part: feature:88956-89246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87700-87935:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88021-88069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88151-88340:1:exon

position:88340:1
position: 88340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88443-88613:1:exon

position:88443:1
position: 88443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88723-88868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88956-89246:1:exon

LOC101819115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101819115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 beta isoform X1
translation: MAFVPDLDTLESNSLNEEMLYGPNCLCPQKKPRLDLEVTSPGVGIQVTVTKGHLSRTFRQAAVLVAAVTKLLKQPSHNDFSDSDLGSFFDDIFGMRLMSGVSPQTEDILGGTLGPGSSILLTVSLPTEPVSFQCIKGSYTKAPVFRYTRSQSFDILDVDHKCFVLESPTQLVALHLQGPSAGRKVKLDIALYRPRSSQGGPRSGRVPVALGIKGYQLYMSCVMSDTQPVLQLEEADIRRDLESVELTRFIFYRLDSPAEGTTRFESAAFPGWFVCTSLQPRQPVGITNTPDQVNIATYELSGH
SIO_010081: LOC101819115
subclass of: SO_0000673
so part of: LOC101819115
location: join(87895..87935,88021..88069,88151..88613,88723..88868,88956..89168)
location: region:87895-89168:1
so has part: feature:87895-87935:1:exon
so has part: feature:88021-88069:1:exon
so has part: feature:88151-88613:1:exon
so has part: feature:88723-88868:1:exon
so has part: feature:88956-89168:1:exon

XP_016159081.1
type: Protein
SIO_000068: ncbiprotein

position:87895:1
position: 87895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89168:1
position: 89168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87895-87935:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88021-88069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88151-88613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88723-88868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88956-89168:1:exon

LOC101819115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101819115
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 beta isoform X2
translation: MAFVPDLDTLESNSLNEEMLYGPNCLCPQKKPRLDLEVTSPGVGIQVTVTKGHLSRTFRQAAVLVAAVTKLLKQPSHNDFSDSDLGSFFDDIFEPVSFQCIKGSYTKAPVFRYTRSQSFDILDVDHKCFVLESPTQLVALHLQGPSAGRKVKLDIALYRPRSSQGGPRSGRVPVALGIKGYQLYMSCVMSDTQPVLQLEEADIRRDLESVELTRFIFYRLDSPAEGTTRFESAAFPGWFVCTSLQPRQPVGITNTPDQVNIATYELSGH
SIO_010081: LOC101819115
subclass of: SO_0000673
so part of: LOC101819115
location: join(87895..87935,88021..88069,88151..88340,88443..88613,88723..88868,88956..89168)
location: region:87895-89168:1
so has part: feature:87895-87935:1:exon
so has part: feature:88021-88069:1:exon
so has part: feature:88151-88340:1:exon
so has part: feature:88443-88613:1:exon
so has part: feature:88723-88868:1:exon
so has part: feature:88956-89168:1:exon

XP_005057946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87895-87935:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88021-88069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88151-88340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88443-88613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88723-88868:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:88956-89168:1:exon

CKAP2L
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 90205..99932
location: region:90205-99932:1
so has part: feature:90205-99932:1:exon
subclass of: SO_0000010

101819510
type: Gene
SIO_000068: ncbigene

position:90205:1
position: 90205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99932:1
position: 99932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90205-99932:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_016303619.1
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90205..90259,92009..92075,93280..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..99932)
location: region:90205-99932:1
so has part: feature:90205-90259:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:93280-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90205-90259:1:exon

position:90259:1
position: 90259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

position:92009:1
position: 92009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92075:1
position: 92075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:93280-94343:1:exon

position:93280:1
position: 93280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94343:1
position: 94343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94758-94950:1:exon

position:94758:1
position: 94758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94950:1
position: 94950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:97059-97214:1:exon

position:97059:1
position: 97059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97214:1
position: 97214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:97573-97636:1:exon

position:97573:1
position: 97573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97636:1
position: 97636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:97930-98077:1:exon

position:97930:1
position: 97930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98077:1
position: 98077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:98169-99932:1:exon

position:98169:1
position: 98169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016303614.1
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90220..90259,90654..90803,92009..92075,92751..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..99932)
location: region:90220-99932:1
so has part: feature:90220-90259:1:exon
so has part: feature:90654-90803:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:92751-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

position:90220:1
position: 90220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90220-90259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90654-90803:1:exon

position:90654:1
position: 90654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90803:1
position: 90803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92751-94343:1:exon

position:92751:1
position: 92751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98169-99932:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005057896.2
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90234..90259,92009..92075,92751..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..99932)
location: region:90234-99932:1
so has part: feature:90234-90259:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:92751-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

position:90234:1
position: 90234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90234-90259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92751-94343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98169-99932:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016303615.1
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90234..90259,92009..92075,92751..92896,93280..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..99932)
location: region:90234-99932:1
so has part: feature:90234-90259:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:92751-92896:1:exon
so has part: feature:93280-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90234-90259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92751-92896:1:exon

position:92896:1
position: 92896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93280-94343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98169-99932:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303616.1
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90234..90259,92009..92075,92751..92816,93280..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..99932)
location: region:90234-99932:1
so has part: feature:90234-90259:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:92751-92816:1:exon
so has part: feature:93280-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90234-90259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92751-92816:1:exon

position:92816:1
position: 92816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:93280-94343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98169-99932:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005057898.2
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90283..90380,92009..92075,93280..94343,94758..94950,97573..97636,97930..98077,98169..99932)
location: region:90283-99932:1
so has part: feature:90283-90380:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:93280-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

position:90283:1
position: 90283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90283-90380:1:exon

position:90380:1
position: 90380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93280-94343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98169-99932:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005057891.2
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90284..90380,92009..92075,93280..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..99932)
location: region:90284-99932:1
so has part: feature:90284-90380:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:93280-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

position:90284:1
position: 90284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90284-90380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93280-94343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98169-99932:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016303618.1
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90294..90376,92009..92075,93280..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..99932)
location: region:90294-99932:1
so has part: feature:90294-90376:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:93280-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

position:90294:1
position: 90294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90294-90376:1:exon

position:90376:1
position: 90376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93280-94343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98169-99932:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X1
translation: MRGCCDLRTLRGRPFLRNWTNHLNSPLEAVSKLKHVDRSKKGVFANVMAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEGVCAEELSAVLSLVPQAEKFAKFWICQAKLLARSGPFDVLQLYREAVIAGAEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90343..90380,92009..92075,93280..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..98403)
location: region:90343-98403:1
so has part: feature:90343-90380:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:93280-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_005057948.1
type: Protein
SIO_000068: ncbiprotein

position:90343:1
position: 90343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98403:1
position: 98403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90343-90380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93280-94343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98169-98403:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X3
translation: MRGCCDLRTLRGRPFLRNWTNHLNSPLEAVSKLKHVDRSKKGVFANVMAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90343..90380,92009..92075,93280..94343,94758..94950,97573..97636,97930..98077,98169..98403)
location: region:90343-98403:1
so has part: feature:90343-90380:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:93280-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_005057955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90343-90380:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93280-94343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98169-98403:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005057894.2
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90387..90803,92009..92075,92751..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..99932)
location: region:90387-99932:1
so has part: feature:90387-90803:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:92751-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

position:90387:1
position: 90387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90387-90803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92751-94343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98169-99932:1:exon

CKAP2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CKAP2L
product: cytoskeleton associated protein 2 like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016303617.1
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(90387..90803,92009..92075,93280..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..99932)
location: region:90387-99932:1
so has part: feature:90387-90803:1:exon
so has part: feature:92009-92075:1:exon
so has part: feature:93280-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-99932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90387-90803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92009-92075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:93280-94343:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98169-99932:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X2
translation: MAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEGVCAEELSAVLSLVPQAEKFAKFWICQAKLLARSGPFDVLQLYREAVIAGAEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(93316..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..98403)
location: region:93316-98403:1
so has part: feature:93316-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_016159100.1
type: Protein
SIO_000068: ncbiprotein

position:93316:1
position: 93316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:93316-94343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98169-98403:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X2
translation: MAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEGVCAEELSAVLSLVPQAEKFAKFWICQAKLLARSGPFDVLQLYREAVIAGAEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(93316..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..98403)
location: region:93316-98403:1
so has part: feature:93316-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_016159101.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93316-94343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98169-98403:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X2
translation: MAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEGVCAEELSAVLSLVPQAEKFAKFWICQAKLLARSGPFDVLQLYREAVIAGAEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(93316..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..98403)
location: region:93316-98403:1
so has part: feature:93316-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_016159102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93316-94343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98169-98403:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X2
translation: MAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEGVCAEELSAVLSLVPQAEKFAKFWICQAKLLARSGPFDVLQLYREAVIAGAEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(93316..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..98403)
location: region:93316-98403:1
so has part: feature:93316-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_016159103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93316-94343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98169-98403:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X2
translation: MAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEGVCAEELSAVLSLVPQAEKFAKFWICQAKLLARSGPFDVLQLYREAVIAGAEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(93316..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..98403)
location: region:93316-98403:1
so has part: feature:93316-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_016159104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93316-94343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98169-98403:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X2
translation: MAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEGVCAEELSAVLSLVPQAEKFAKFWICQAKLLARSGPFDVLQLYREAVIAGAEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(93316..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..98403)
location: region:93316-98403:1
so has part: feature:93316-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_016159105.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93316-94343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98169-98403:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X2
translation: MAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEGVCAEELSAVLSLVPQAEKFAKFWICQAKLLARSGPFDVLQLYREAVIAGAEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(93316..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..98403)
location: region:93316-98403:1
so has part: feature:93316-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_005057951.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93316-94343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98169-98403:1:exon

CKAP2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CKAP2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoskeleton-associated protein 2-like isoform X2
translation: MAGAREDGRLGAKSMQHAGHTVQKKLSNTSQGAGRVQPANIMTLPASMQTSGKLPPSASGHVNPERSRKPAQETVTAAAAQAGSDHPPPGAPHSLSKGLQGRLVCHKENLNPQASTCLESMRTFQSDANSLRKTGVLAHRQSSAVTSKPVLGPKGRISNQQPQEALVVDKFRKTLPESKSISQNTSIGTQPLQPSGLLSASTNLLHKNSGTKEGETTMVRQPGTAPGGSLKHHSQPPPVRFPTKPPTLGNPQGLLNPGVTLPPRRPTVKEGMDRKDMKVVLPGHTAAGQGTGHPNQSCSWLHSSNTHVLEDGLRREQLKPELPKAGGMQARRIPRTPSAADRKKQLEEWLASKGKKYKRPPMAQLQKQAVKPSYRKVKAKENQEHPEQHCQATINSILTECLKLIEEGVCAEELSAVLSLVPQAEKFAKFWICQAKLLARSGPFDVLQLYREAVIAGAEPIEELRETVLNILKDAGQKLEGEKAEEPIPWEPRKCCPGERQPIASTPGLAGRPMTSLPLSVKLQVTPASRVREFLEGPEVKFLTPVRRSLRIERAGSHYPELLKDHDPVVSSLSEILDAEEDTCFYFRKNVALPEVTELEGLSSYPL
SIO_010081: CKAP2L
subclass of: SO_0000673
so part of: CKAP2L
location: join(93316..94343,94758..94950,97059..97214,97573..97636,97930..98077,98169..98403)
location: region:93316-98403:1
so has part: feature:93316-94343:1:exon
so has part: feature:94758-94950:1:exon
so has part: feature:97059-97214:1:exon
so has part: feature:97573-97636:1:exon
so has part: feature:97930-98077:1:exon
so has part: feature:98169-98403:1:exon

XP_005057953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:93316-94343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94758-94950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:97059-97214:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97573-97636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97930-98077:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98169-98403:1:exon

LOC101819316
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101819316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99579..103366)
location: region:99579-103366:-1
so has part: feature:99579-103366:-1:exon
subclass of: SO_0000010

101819316
type: Gene
SIO_000068: ncbigene

position:99579:-1
position: 99579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103366:-1
position: 103366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99579-103366:-1:exon

LOC101819316
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101819316
product: cytosolic purine 5'-nucleotidase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_016303621.1
SIO_010081: LOC101819316
subclass of: SO_0000673
so part of: LOC101819316
location: complement(join(99579..100161,100263..100364,100526..100702,100826..100886,100978..101029,101206..101376,101465..101531,101669..101776,101862..101903,102041..102124,102234..102287,102392..102485,102590..102647,102739..102830,102916..103011,103137..103203,103290..103366))
location: region:99579-103366:-1
so has part: feature:103290-103366:-1:exon
so has part: feature:103137-103203:-1:exon
so has part: feature:102916-103011:-1:exon
so has part: feature:102739-102830:-1:exon
so has part: feature:102590-102647:-1:exon
so has part: feature:102392-102485:-1:exon
so has part: feature:102234-102287:-1:exon
so has part: feature:102041-102124:-1:exon
so has part: feature:101862-101903:-1:exon
so has part: feature:101669-101776:-1:exon
so has part: feature:101465-101531:-1:exon
so has part: feature:101206-101376:-1:exon
so has part: feature:100978-101029:-1:exon
so has part: feature:100826-100886:-1:exon
so has part: feature:100526-100702:-1:exon
so has part: feature:100263-100364:-1:exon
so has part: feature:99579-100161:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103290-103366:-1:exon

position:103290:-1
position: 103290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103137-103203:-1:exon

position:103137:-1
position: 103137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103203:-1
position: 103203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:102916-103011:-1:exon

position:102916:-1
position: 102916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103011:-1
position: 103011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:102739-102830:-1:exon

position:102739:-1
position: 102739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102830:-1
position: 102830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:102590-102647:-1:exon

position:102590:-1
position: 102590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102647:-1
position: 102647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:102392-102485:-1:exon

position:102392:-1
position: 102392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102485:-1
position: 102485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:102234-102287:-1:exon

position:102234:-1
position: 102234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102287:-1
position: 102287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:102041-102124:-1:exon

position:102041:-1
position: 102041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102124:-1
position: 102124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:101862-101903:-1:exon

position:101862:-1
position: 101862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101903:-1
position: 101903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:101669-101776:-1:exon

position:101669:-1
position: 101669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101776:-1
position: 101776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:101465-101531:-1:exon

position:101465:-1
position: 101465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101531:-1
position: 101531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:101206-101376:-1:exon

position:101206:-1
position: 101206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101376:-1
position: 101376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:100978-101029:-1:exon

position:100978:-1
position: 100978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101029:-1
position: 101029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:100826-100886:-1:exon

position:100826:-1
position: 100826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100886:-1
position: 100886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:100526-100702:-1:exon

position:100526:-1
position: 100526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100702:-1
position: 100702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:100263-100364:-1:exon

position:100263:-1
position: 100263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100364:-1
position: 100364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:99579-100161:-1:exon

position:100161:-1
position: 100161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101819316
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101819316
product: cytosolic purine 5'-nucleotidase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016303620.1
SIO_010081: LOC101819316
subclass of: SO_0000673
so part of: LOC101819316
location: complement(join(99580..100161,100263..100364,100526..100702,100826..100886,100978..101029,101206..101376,101465..101531,101669..101776,101862..101903,102041..102124,102234..102287,102392..102485,102590..102647,102739..102830,102916..103011,103086..103203,103290..103366))
location: region:99580-103366:-1
so has part: feature:103290-103366:-1:exon
so has part: feature:103086-103203:-1:exon
so has part: feature:102916-103011:-1:exon
so has part: feature:102739-102830:-1:exon
so has part: feature:102590-102647:-1:exon
so has part: feature:102392-102485:-1:exon
so has part: feature:102234-102287:-1:exon
so has part: feature:102041-102124:-1:exon
so has part: feature:101862-101903:-1:exon
so has part: feature:101669-101776:-1:exon
so has part: feature:101465-101531:-1:exon
so has part: feature:101206-101376:-1:exon
so has part: feature:100978-101029:-1:exon
so has part: feature:100826-100886:-1:exon
so has part: feature:100526-100702:-1:exon
so has part: feature:100263-100364:-1:exon
so has part: feature:99580-100161:-1:exon

position:99580:-1
position: 99580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103290-103366:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103086-103203:-1:exon

position:103086:-1
position: 103086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:102916-103011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102739-102830:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102590-102647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102392-102485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102234-102287:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102041-102124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101862-101903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101669-101776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:101465-101531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:101206-101376:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100978-101029:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100826-100886:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100526-100702:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100263-100364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99580-100161:-1:exon

LOC101819316
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101819316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic purine 5'-nucleotidase-like isoform X2
translation: MDYTLAMYKSPDYEELAFTLLLEHLVAIGGLVFDALYGNLLKVDSHGNLLVCAHGFRFLKGAEILHYYPNKFIQRDDMKRFHILNTLFNLTEAHLYACLVDFFTNCSRYVNCDTGYKHGNLFMSFRSMFQDVREAMDHVHLSGCLKEKTLENLEKYVVKDPRVPLLLSRMKEVGKIFLATNSDYTYTDAIMSYLFDFSNEDKADVPQRPWRSYFDLIVVDTRKPLFFAEGTVLRQVDTDTGKLRIGTYTGPLQHCAVYSGGSSDMVCDLLGVKGKDILYMGDHIFGDILKSKKRQGWRTFLVVPELARELQVWTEKSELFEELRSLDLFLAELYQHLDSGSSERPDISSIKRRIQKVTHEMDMCYGKMGSLFRCGSRQTLFANQLMRYADLYAASFINFLYYPFSYLFRAPPVLMAHESTVEHSRPDSGDTVTALPPGLAQHGDPGQQVPQDSSGEEEDDGEA
SIO_010081: LOC101819316
subclass of: SO_0000673
so part of: LOC101819316
location: complement(join(100114..100161,100263..100364,100526..100702,100826..100886,100978..101029,101206..101376,101465..101531,101669..101776,101862..101903,102041..102124,102234..102287,102392..102485,102590..102647,102739..102830,102916..103011,103137..103203,103290..103308))
location: region:100114-103308:-1
so has part: feature:103290-103308:-1:exon
so has part: feature:103137-103203:-1:exon
so has part: feature:102916-103011:-1:exon
so has part: feature:102739-102830:-1:exon
so has part: feature:102590-102647:-1:exon
so has part: feature:102392-102485:-1:exon
so has part: feature:102234-102287:-1:exon
so has part: feature:102041-102124:-1:exon
so has part: feature:101862-101903:-1:exon
so has part: feature:101669-101776:-1:exon
so has part: feature:101465-101531:-1:exon
so has part: feature:101206-101376:-1:exon
so has part: feature:100978-101029:-1:exon
so has part: feature:100826-100886:-1:exon
so has part: feature:100526-100702:-1:exon
so has part: feature:100263-100364:-1:exon
so has part: feature:100114-100161:-1:exon

XP_016159107.1
type: Protein
SIO_000068: ncbiprotein

position:100114:-1
position: 100114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103308:-1
position: 103308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103290-103308:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103137-103203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102916-103011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102739-102830:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102590-102647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102392-102485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102234-102287:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102041-102124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101862-101903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101669-101776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:101465-101531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:101206-101376:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100978-101029:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100826-100886:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100526-100702:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100263-100364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100114-100161:-1:exon

LOC101819316
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101819316
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic purine 5'-nucleotidase-like isoform X1
translation: MDYTLAMYKSPDYEELAFTLLLEHLVAIGYPPEILAYKYDPTFPTRGLVFDALYGNLLKVDSHGNLLVCAHGFRFLKGAEILHYYPNKFIQRDDMKRFHILNTLFNLTEAHLYACLVDFFTNCSRYVNCDTGYKHGNLFMSFRSMFQDVREAMDHVHLSGCLKEKTLENLEKYVVKDPRVPLLLSRMKEVGKIFLATNSDYTYTDAIMSYLFDFSNEDKADVPQRPWRSYFDLIVVDTRKPLFFAEGTVLRQVDTDTGKLRIGTYTGPLQHCAVYSGGSSDMVCDLLGVKGKDILYMGDHIFGDILKSKKRQGWRTFLVVPELARELQVWTEKSELFEELRSLDLFLAELYQHLDSGSSERPDISSIKRRIQKVTHEMDMCYGKMGSLFRCGSRQTLFANQLMRYADLYAASFINFLYYPFSYLFRAPPVLMAHESTVEHSRPDSGDTVTALPPGLAQHGDPGQQVPQDSSGEEEDDGEA
SIO_010081: LOC101819316
subclass of: SO_0000673
so part of: LOC101819316
location: complement(join(100114..100161,100263..100364,100526..100702,100826..100886,100978..101029,101206..101376,101465..101531,101669..101776,101862..101903,102041..102124,102234..102287,102392..102485,102590..102647,102739..102830,102916..103011,103086..103203,103290..103308))
location: region:100114-103308:-1
so has part: feature:103290-103308:-1:exon
so has part: feature:103086-103203:-1:exon
so has part: feature:102916-103011:-1:exon
so has part: feature:102739-102830:-1:exon
so has part: feature:102590-102647:-1:exon
so has part: feature:102392-102485:-1:exon
so has part: feature:102234-102287:-1:exon
so has part: feature:102041-102124:-1:exon
so has part: feature:101862-101903:-1:exon
so has part: feature:101669-101776:-1:exon
so has part: feature:101465-101531:-1:exon
so has part: feature:101206-101376:-1:exon
so has part: feature:100978-101029:-1:exon
so has part: feature:100826-100886:-1:exon
so has part: feature:100526-100702:-1:exon
so has part: feature:100263-100364:-1:exon
so has part: feature:100114-100161:-1:exon

XP_016159106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103290-103308:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103086-103203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:102916-103011:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:102739-102830:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:102590-102647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102392-102485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102234-102287:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102041-102124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101862-101903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101669-101776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:101465-101531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:101206-101376:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:100978-101029:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:100826-100886:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:100526-100702:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100263-100364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:100114-100161:-1:exon

LOC107604133
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(103310..104942)
location: region:103310-104942:-1
so has part: feature:103310-104942:-1:exon
subclass of: SO_0000010

107604133
type: Gene
SIO_000068: ncbigene

position:103310:-1
position: 103310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104942:-1
position: 104942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103310-104942:-1:exon

LOC107604133
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604133
product: cytosolic purine 5'-nucleotidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303533.1
SIO_010081: LOC107604133
subclass of: SO_0000673
so part of: LOC107604133
location: complement(join(103310..103345,103390..103483,103588..103645,103737..103828,103914..104009,104084..104201,104288..104361,104833..104942))
location: region:103310-104942:-1
so has part: feature:104833-104942:-1:exon
so has part: feature:104288-104361:-1:exon
so has part: feature:104084-104201:-1:exon
so has part: feature:103914-104009:-1:exon
so has part: feature:103737-103828:-1:exon
so has part: feature:103588-103645:-1:exon
so has part: feature:103390-103483:-1:exon
so has part: feature:103310-103345:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104833-104942:-1:exon

position:104833:-1
position: 104833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:104288-104361:-1:exon

position:104288:-1
position: 104288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104361:-1
position: 104361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104084-104201:-1:exon

position:104084:-1
position: 104084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104201:-1
position: 104201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:103914-104009:-1:exon

position:103914:-1
position: 103914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104009:-1
position: 104009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:103737-103828:-1:exon

position:103737:-1
position: 103737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103828:-1
position: 103828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:103588-103645:-1:exon

position:103588:-1
position: 103588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103645:-1
position: 103645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:103390-103483:-1:exon

position:103390:-1
position: 103390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103483:-1
position: 103483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:103310-103345:-1:exon

position:103345:-1
position: 103345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107604133
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604133
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic purine 5'-nucleotidase-like
translation: MGSEGQRGPAAARGPGQGDPQTLRRDCQHRIFVNRSLALEKIKCFGFDMDYTLAMYKSPDYEELAFTLLLEHLVAIGYPPEILAYKYDPTFPTRGLVFDALYGNLLKVDSHGNLLVCAHGFRFLKGAEILHYYPNKFIQRDDMKRFHILNTLFNLTEAHLYACLVDFFTNCSRYVNCDTGYKHGNLFMSFRSMFQDVREAMDHVHLSPGAGEDQVLWL
SIO_010081: LOC107604133
subclass of: SO_0000673
so part of: LOC107604133
location: complement(join(103310..103345,103390..103483,103588..103645,103737..103828,103914..104009,104084..104201,104288..104361,104833..104921))
location: region:103310-104921:-1
so has part: feature:104833-104921:-1:exon
so has part: feature:104288-104361:-1:exon
so has part: feature:104084-104201:-1:exon
so has part: feature:103914-104009:-1:exon
so has part: feature:103737-103828:-1:exon
so has part: feature:103588-103645:-1:exon
so has part: feature:103390-103483:-1:exon
so has part: feature:103310-103345:-1:exon

XP_016159019.1
type: Protein
SIO_000068: ncbiprotein

position:104921:-1
position: 104921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104833-104921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104288-104361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104084-104201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:103914-104009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103737-103828:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103588-103645:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103390-103483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:103310-103345:-1:exon

SLC20A1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SLC20A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(106243..114512)
location: region:106243-114512:-1
so has part: feature:106243-114512:-1:exon
subclass of: SO_0000010

101820638
type: Gene
SIO_000068: ncbigene

position:106243:-1
position: 106243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114512:-1
position: 114512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:106243-114512:-1:exon

SLC20A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SLC20A1
product: solute carrier family 20 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016303622.1
SIO_010081: SLC20A1
subclass of: SO_0000673
so part of: SLC20A1
location: complement(join(106243..106904,107355..107439,108135..108684,108776..109024,110511..110630,112225..112321,113567..113652,113754..113894,113983..114512))
location: region:106243-114512:-1
so has part: feature:113983-114512:-1:exon
so has part: feature:113754-113894:-1:exon
so has part: feature:113567-113652:-1:exon
so has part: feature:112225-112321:-1:exon
so has part: feature:110511-110630:-1:exon
so has part: feature:108776-109024:-1:exon
so has part: feature:108135-108684:-1:exon
so has part: feature:107355-107439:-1:exon
so has part: feature:106243-106904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113983-114512:-1:exon

position:113983:-1
position: 113983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113754-113894:-1:exon

position:113754:-1
position: 113754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113894:-1
position: 113894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:113567-113652:-1:exon

position:113567:-1
position: 113567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113652:-1
position: 113652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:112225-112321:-1:exon

position:112225:-1
position: 112225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112321:-1
position: 112321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:110511-110630:-1:exon

position:110511:-1
position: 110511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110630:-1
position: 110630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:108776-109024:-1:exon

position:108776:-1
position: 108776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109024:-1
position: 109024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:108135-108684:-1:exon

position:108135:-1
position: 108135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108684:-1
position: 108684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:107355-107439:-1:exon

position:107355:-1
position: 107355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107439:-1
position: 107439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:106243-106904:-1:exon

position:106904:-1
position: 106904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC20A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SLC20A1
product: solute carrier family 20 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005057900.2
SIO_010081: SLC20A1
subclass of: SO_0000673
so part of: SLC20A1
location: complement(join(106243..106904,107355..107439,107686..107871,108135..108684,108776..109024,110511..110630,112225..112321,113567..113652,113754..113894,113983..114512))
location: region:106243-114512:-1
so has part: feature:113983-114512:-1:exon
so has part: feature:113754-113894:-1:exon
so has part: feature:113567-113652:-1:exon
so has part: feature:112225-112321:-1:exon
so has part: feature:110511-110630:-1:exon
so has part: feature:108776-109024:-1:exon
so has part: feature:108135-108684:-1:exon
so has part: feature:107686-107871:-1:exon
so has part: feature:107355-107439:-1:exon
so has part: feature:106243-106904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113983-114512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113754-113894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113567-113652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112225-112321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110511-110630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108776-109024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108135-108684:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107686-107871:-1:exon

position:107686:-1
position: 107686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107871:-1
position: 107871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:107355-107439:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106243-106904:-1:exon

SLC20A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SLC20A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 1 isoform X2
translation: MESTPVVPTAPMSDFLWMLVLGFIIAFVLAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETVGSVLLGAKVSETIRKGLIDVQMYNSTRELLMAGSISAMSGSAVWQLMASFLKLPISGTHCIVGATIGFSLVAIGQDGVKWSELLKIVLSWFISPLFSGIMSAILFFLVQRFILCKADPVPNGLRALPIFYACTVGINLFSIMYTGAPLLGFDKLPLWGILLISAGSAVVCALIVWFFVCPRMKKKIDREIKSSPSESPLMEKNVCPKEEQEEAKMPLGDAKGPAADAGSAIPLQAVVEERMVSFNLGELEESPEQERLPSLDLKETSIDSGAVRLPNGNLVHLSQAVGHQLGSGGQYQYHTVHKDSGLYKELLHKLHLAKMGDCMGDSGDKPLRRNNSYTSYTMAICGMPLDSLRARDSEDGEKLSWSVADTKKRVRMDSYTSYCNAVADSHPAADVDLNTAQAELGASDRKGSSGSLEEWHEQDKPEVSLLFQFLQILTACFGSFAHGGNDVSGFSIELASALTVVIASNVGLPISTTHCKVGSVVSVGWLRSRKAVDWRLFRNIFMAWFVTVPISGLISAAIMAVFKFAVLKR
SIO_010081: SLC20A1
subclass of: SO_0000673
so part of: SLC20A1
location: complement(join(106743..106904,107355..107439,108135..108684,108776..109024,110511..110630,112225..112321,113567..113652,113754..113894,113983..114298))
location: region:106743-114298:-1
so has part: feature:113983-114298:-1:exon
so has part: feature:113754-113894:-1:exon
so has part: feature:113567-113652:-1:exon
so has part: feature:112225-112321:-1:exon
so has part: feature:110511-110630:-1:exon
so has part: feature:108776-109024:-1:exon
so has part: feature:108135-108684:-1:exon
so has part: feature:107355-107439:-1:exon
so has part: feature:106743-106904:-1:exon

XP_016159108.1
type: Protein
SIO_000068: ncbiprotein

position:106743:-1
position: 106743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114298:-1
position: 114298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113983-114298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113754-113894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113567-113652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112225-112321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110511-110630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108776-109024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108135-108684:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107355-107439:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:106743-106904:-1:exon

SLC20A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SLC20A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium-dependent phosphate transporter 1 isoform X1
translation: MESTPVVPTAPMSDFLWMLVLGFIIAFVLAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETVGSVLLGAKVSETIRKGLIDVQMYNSTRELLMAGSISAMSGSAVWQLMASFLKLPISGTHCIVGATIGFSLVAIGQDGVKWSELLKIVLSWFISPLFSGIMSAILFFLVQRFILCKADPVPNGLRALPIFYACTVGINLFSIMYTGAPLLGFDKLPLWGILLISAGSAVVCALIVWFFVCPRMKKKIDREIKSSPSESPLMEKNVCPKEEQEEAKMPLGDAKGPAADAGSAIPLQAVVEERMVSFNLGELEESPEQERLPSLDLKETSIDSGAVRLPNGNLVHLSQAVGHQLGSGGQYQYHTVHKDSGLYKELLHKLHLAKMGDCMGDSGDKPLRRNNSYTSYTMAICGMPLDSLRARDSEDGEKLSWSVADTKKRVRMDSYTSYCNAVADSHPAADVDLNTAQAELGASDRKGSSGSLEEWHEQDKPEVSLLFQFLQILTACFGSFAHGGNDVSNAIGPLVALFLVYQTGDVATKVATPIWLLLYGGAGICIGLWVWGRRVIQTMGKDLTPITPSSGFSIELASALTVVIASNVGLPISTTHCKVGSVVSVGWLRSRKAVDWRLFRNIFMAWFVTVPISGLISAAIMAVFKFAVLKR
SIO_010081: SLC20A1
subclass of: SO_0000673
so part of: SLC20A1
location: complement(join(106743..106904,107355..107439,107686..107871,108135..108684,108776..109024,110511..110630,112225..112321,113567..113652,113754..113894,113983..114298))
location: region:106743-114298:-1
so has part: feature:113983-114298:-1:exon
so has part: feature:113754-113894:-1:exon
so has part: feature:113567-113652:-1:exon
so has part: feature:112225-112321:-1:exon
so has part: feature:110511-110630:-1:exon
so has part: feature:108776-109024:-1:exon
so has part: feature:108135-108684:-1:exon
so has part: feature:107686-107871:-1:exon
so has part: feature:107355-107439:-1:exon
so has part: feature:106743-106904:-1:exon

XP_005057957.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113983-114298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113754-113894:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113567-113652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:112225-112321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:110511-110630:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:108776-109024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:108135-108684:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:107686-107871:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:107355-107439:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:106743-106904:-1:exon

NUDCD3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NUDCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 124698..153153
location: region:124698-153153:1
so has part: feature:124698-153153:1:exon
subclass of: SO_0000010

101821282
type: Gene
SIO_000068: ncbigene

position:124698:1
position: 124698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153153:1
position: 153153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124698-153153:1:exon

NUDCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NUDCD3
product: NudC domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016303626.1
SIO_010081: NUDCD3
subclass of: SO_0000673
so part of: NUDCD3
location: join(124698..124943,126894..127189,140866..140998,145239..145382,151339..151527,152093..153153)
location: region:124698-153153:1
so has part: feature:124698-124943:1:exon
so has part: feature:126894-127189:1:exon
so has part: feature:140866-140998:1:exon
so has part: feature:145239-145382:1:exon
so has part: feature:151339-151527:1:exon
so has part: feature:152093-153153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124698-124943:1:exon

position:124943:1
position: 124943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126894-127189:1:exon

position:126894:1
position: 126894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127189:1
position: 127189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140866-140998:1:exon

position:140866:1
position: 140866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140998:1
position: 140998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:145239-145382:1:exon

position:145239:1
position: 145239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145382:1
position: 145382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:151339-151527:1:exon

position:151339:1
position: 151339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151527:1
position: 151527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:152093-153153:1:exon

position:152093:1
position: 152093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUDCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NUDCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nudC domain-containing protein 3
translation: MEAALTDMYDQALLGILQHVGSVEEFLRILFGFLYRKTDFYRLLLRPGDRLGFPPGAAQAMALQAFRVFERMARQDDEKRRREMEAKLRKKEEEEEEAAAAAERVKLCPAAQEIEVETTEHIPEPHAGEAAGTQESAAAQGAAAPSPVTAEPPGAAAPAELPTRQEQFQTNPDSYNGAVRENYTWSQDYSDLEIKVPVPKHIVKGKQVSVDISSGAIRVAVLEGSSQHILMEGKLTHKINTESSLWSLEPGKCVLINLNKGDEYWWNAILEGEEQIDIDKINKERSMATVDEEEHAVLDRLTFDYHQKLQGKPQSHELKVHEMLKKGWDTEGSPFRGQKFDPSMFNISPGAVQF
SIO_010081: NUDCD3
subclass of: SO_0000673
so part of: NUDCD3
location: join(124752..124943,126894..127189,140866..140998,145239..145382,151339..151527,152093..152203)
location: region:124752-152203:1
so has part: feature:124752-124943:1:exon
so has part: feature:126894-127189:1:exon
so has part: feature:140866-140998:1:exon
so has part: feature:145239-145382:1:exon
so has part: feature:151339-151527:1:exon
so has part: feature:152093-152203:1:exon

XP_016159112.1
type: Protein
SIO_000068: ncbiprotein

position:124752:1
position: 124752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152203:1
position: 152203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124752-124943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126894-127189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140866-140998:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:145239-145382:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151339-151527:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:152093-152203:1:exon

CAMK2B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CAMK2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 157793..176602
location: region:157793-176602:1
so has part: feature:157793-176602:1:exon
subclass of: SO_0000010

101817363
type: Gene
SIO_000068: ncbigene

position:157793:1
position: 157793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176602:1
position: 176602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157793-176602:1:exon

CAMK2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CAMK2B
product: calcium/calmodulin dependent protein kinase II beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303534.1
SIO_010081: CAMK2B
subclass of: SO_0000673
so part of: CAMK2B
location: join(157793..157947,158028..158122,160657..160716,160995..161049,161150..161215,163845..163917,164604..164706,164926..165009,165488..165582,165800..165922,166004..166087,166694..166736,170143..170183,170268..170339,171838..171882,172121..172169,175260..175335,175512..175606,176123..176357,176426..176602)
location: region:157793-176602:1
so has part: feature:157793-157947:1:exon
so has part: feature:158028-158122:1:exon
so has part: feature:160657-160716:1:exon
so has part: feature:160995-161049:1:exon
so has part: feature:161150-161215:1:exon
so has part: feature:163845-163917:1:exon
so has part: feature:164604-164706:1:exon
so has part: feature:164926-165009:1:exon
so has part: feature:165488-165582:1:exon
so has part: feature:165800-165922:1:exon
so has part: feature:166004-166087:1:exon
so has part: feature:166694-166736:1:exon
so has part: feature:170143-170183:1:exon
so has part: feature:170268-170339:1:exon
so has part: feature:171838-171882:1:exon
so has part: feature:172121-172169:1:exon
so has part: feature:175260-175335:1:exon
so has part: feature:175512-175606:1:exon
so has part: feature:176123-176357:1:exon
so has part: feature:176426-176602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157793-157947:1:exon

position:157947:1
position: 157947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158028-158122:1:exon

position:158028:1
position: 158028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158122:1
position: 158122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160657-160716:1:exon

position:160657:1
position: 160657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160716:1
position: 160716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:160995-161049:1:exon

position:160995:1
position: 160995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161049:1
position: 161049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:161150-161215:1:exon

position:161150:1
position: 161150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161215:1
position: 161215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:163845-163917:1:exon

position:163845:1
position: 163845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163917:1
position: 163917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164604-164706:1:exon

position:164604:1
position: 164604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164706:1
position: 164706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:164926-165009:1:exon

position:164926:1
position: 164926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165009:1
position: 165009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:165488-165582:1:exon

position:165488:1
position: 165488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165582:1
position: 165582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:165800-165922:1:exon

position:165800:1
position: 165800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165922:1
position: 165922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:166004-166087:1:exon

position:166004:1
position: 166004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166087:1
position: 166087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:166694-166736:1:exon

position:166694:1
position: 166694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166736:1
position: 166736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:170143-170183:1:exon

position:170143:1
position: 170143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170183:1
position: 170183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:170268-170339:1:exon

position:170268:1
position: 170268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170339:1
position: 170339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:171838-171882:1:exon

position:171838:1
position: 171838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171882:1
position: 171882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:172121-172169:1:exon

position:172121:1
position: 172121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172169:1
position: 172169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:175260-175335:1:exon

position:175260:1
position: 175260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175335:1
position: 175335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:175512-175606:1:exon

position:175512:1
position: 175512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175606:1
position: 175606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:176123-176357:1:exon

position:176123:1
position: 176123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176357:1
position: 176357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:176426-176602:1:exon

position:176426:1
position: 176426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAMK2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CAMK2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent protein kinase type II subunit beta
translation: MHGTEFPLQPLSPSHPRVPPQCTHSRGPPSPPRAGVHPPGAESLRVQPPDLGGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGAILTTMLATRNFSAAKSLLNKKADGVKPQTNSTKGSAGVTSPKGTLPPTALEPQTTVIHNPADGTKESSDSTNTTIEDEDTKARKQEIIKITEQLIEAVNNGDFEAYAKICDPGLTSFEPEALGNLVEGMDFHRFYFENLLSKNNKPIHTTILNPHVHVIGEDAACIAYIRLTQYIDAQGRPRTSQSEETRVWHRRDGKWQNVHFHGSGAPVAPLQ
SIO_010081: CAMK2B
subclass of: SO_0000673
so part of: CAMK2B
location: join(157793..157947,158028..158122,160657..160716,160995..161049,161150..161215,163845..163917,164604..164706,164926..165009,165488..165582,165800..165922,166004..166087,166694..166736,170143..170183,170268..170339,171838..171882,172121..172169,175260..175335,175512..175606,176123..176355)
location: region:157793-176355:1
so has part: feature:157793-157947:1:exon
so has part: feature:158028-158122:1:exon
so has part: feature:160657-160716:1:exon
so has part: feature:160995-161049:1:exon
so has part: feature:161150-161215:1:exon
so has part: feature:163845-163917:1:exon
so has part: feature:164604-164706:1:exon
so has part: feature:164926-165009:1:exon
so has part: feature:165488-165582:1:exon
so has part: feature:165800-165922:1:exon
so has part: feature:166004-166087:1:exon
so has part: feature:166694-166736:1:exon
so has part: feature:170143-170183:1:exon
so has part: feature:170268-170339:1:exon
so has part: feature:171838-171882:1:exon
so has part: feature:172121-172169:1:exon
so has part: feature:175260-175335:1:exon
so has part: feature:175512-175606:1:exon
so has part: feature:176123-176355:1:exon

XP_016159020.1
type: Protein
SIO_000068: ncbiprotein

position:176355:1
position: 176355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157793-157947:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158028-158122:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160657-160716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160995-161049:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:161150-161215:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163845-163917:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164604-164706:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164926-165009:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165488-165582:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165800-165922:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:166004-166087:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:166694-166736:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:170143-170183:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:170268-170339:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:171838-171882:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:172121-172169:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:175260-175335:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:175512-175606:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:176123-176355:1:exon

YKT6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: YKT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(178787..186647)
location: region:178787-186647:-1
so has part: feature:178787-186647:-1:exon
subclass of: SO_0000010

101821483
type: Gene
SIO_000068: ncbigene

position:178787:-1
position: 178787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186647:-1
position: 186647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178787-186647:-1:exon

YKT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: YKT6
product: YKT6 v-SNARE homolog (S. cerevisiae), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005057904.1
SIO_010081: YKT6
subclass of: SO_0000673
so part of: YKT6
location: complement(join(178787..179204,179617..179718,180102..180167,180337..180441,181777..181877,182706..182788,185605..185726,186495..186647))
location: region:178787-186647:-1
so has part: feature:186495-186647:-1:exon
so has part: feature:185605-185726:-1:exon
so has part: feature:182706-182788:-1:exon
so has part: feature:181777-181877:-1:exon
so has part: feature:180337-180441:-1:exon
so has part: feature:180102-180167:-1:exon
so has part: feature:179617-179718:-1:exon
so has part: feature:178787-179204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186495-186647:-1:exon

position:186495:-1
position: 186495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185605-185726:-1:exon

position:185605:-1
position: 185605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185726:-1
position: 185726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182706-182788:-1:exon

position:182706:-1
position: 182706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182788:-1
position: 182788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:181777-181877:-1:exon

position:181777:-1
position: 181777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181877:-1
position: 181877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180337-180441:-1:exon

position:180337:-1
position: 180337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180441:-1
position: 180441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:180102-180167:-1:exon

position:180102:-1
position: 180102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180167:-1
position: 180167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:179617-179718:-1:exon

position:179617:-1
position: 179617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179718:-1
position: 179718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:178787-179204:-1:exon

position:179204:-1
position: 179204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YKT6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: YKT6
product: YKT6 v-SNARE homolog (S. cerevisiae), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005057905.1
SIO_010081: YKT6
subclass of: SO_0000673
so part of: YKT6
location: complement(join(178787..179204,179617..179718,180102..180167,180337..180441,181777..181877,182706..182788,185605..185726,186491..186647))
location: region:178787-186647:-1
so has part: feature:186491-186647:-1:exon
so has part: feature:185605-185726:-1:exon
so has part: feature:182706-182788:-1:exon
so has part: feature:181777-181877:-1:exon
so has part: feature:180337-180441:-1:exon
so has part: feature:180102-180167:-1:exon
so has part: feature:179617-179718:-1:exon
so has part: feature:178787-179204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186491-186647:-1:exon

position:186491:-1
position: 186491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:185605-185726:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182706-182788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:181777-181877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180337-180441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180102-180167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179617-179718:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:178787-179204:-1:exon

YKT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: YKT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptobrevin homolog YKT6
translation: MRLYSLSVLYKGDPKVHLLKAAYDVSTFNFFQRSSVQEFMAFTSQLITERSALGSRASVKEQEYLCHVYVRSDGLAGVVIADNEYPQRVCFTLLDKVLDEFSRQVSKMDWPSGSPATISYSALDGYLSKYQNPRDADPMTRVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGAQSKAFYKTARKQNSCCEIM
SIO_010081: YKT6
subclass of: SO_0000673
so part of: YKT6
location: complement(join(179169..179204,179617..179718,180102..180167,180337..180441,181777..181877,182706..182788,185605..185708))
location: region:179169-185708:-1
so has part: feature:185605-185708:-1:exon
so has part: feature:182706-182788:-1:exon
so has part: feature:181777-181877:-1:exon
so has part: feature:180337-180441:-1:exon
so has part: feature:180102-180167:-1:exon
so has part: feature:179617-179718:-1:exon
so has part: feature:179169-179204:-1:exon

XP_005057961.1
type: Protein
SIO_000068: ncbiprotein

position:179169:-1
position: 179169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185708:-1
position: 185708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185605-185708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182706-182788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181777-181877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180337-180441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180102-180167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179617-179718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179169-179204:-1:exon

YKT6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: YKT6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptobrevin homolog YKT6
translation: MRLYSLSVLYKGDPKVHLLKAAYDVSTFNFFQRSSVQEFMAFTSQLITERSALGSRASVKEQEYLCHVYVRSDGLAGVVIADNEYPQRVCFTLLDKVLDEFSRQVSKMDWPSGSPATISYSALDGYLSKYQNPRDADPMTRVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGAQSKAFYKTARKQNSCCEIM
SIO_010081: YKT6
subclass of: SO_0000673
so part of: YKT6
location: complement(join(179169..179204,179617..179718,180102..180167,180337..180441,181777..181877,182706..182788,185605..185708))
location: region:179169-185708:-1
so has part: feature:185605-185708:-1:exon
so has part: feature:182706-182788:-1:exon
so has part: feature:181777-181877:-1:exon
so has part: feature:180337-180441:-1:exon
so has part: feature:180102-180167:-1:exon
so has part: feature:179617-179718:-1:exon
so has part: feature:179169-179204:-1:exon

XP_005057962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:185605-185708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182706-182788:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181777-181877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180337-180441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180102-180167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179617-179718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179169-179204:-1:exon

GCK
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GCK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 187890..196096
location: region:187890-196096:1
so has part: feature:187890-196096:1:exon
subclass of: SO_0000010

101821944
type: Gene
SIO_000068: ncbigene

position:187890:1
position: 187890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196096:1
position: 196096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187890-196096:1:exon

GCK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GCK
product: glucokinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005057906.2
SIO_010081: GCK
subclass of: SO_0000673
so part of: GCK
location: join(187890..188428,190561..190723,190844..190998,191573..191692,191783..191878,192196..192295,193972..194155,194372..194527,195263..195496,195590..196096)
location: region:187890-196096:1
so has part: feature:187890-188428:1:exon
so has part: feature:190561-190723:1:exon
so has part: feature:190844-190998:1:exon
so has part: feature:191573-191692:1:exon
so has part: feature:191783-191878:1:exon
so has part: feature:192196-192295:1:exon
so has part: feature:193972-194155:1:exon
so has part: feature:194372-194527:1:exon
so has part: feature:195263-195496:1:exon
so has part: feature:195590-196096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187890-188428:1:exon

position:188428:1
position: 188428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190561-190723:1:exon

position:190561:1
position: 190561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190723:1
position: 190723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:190844-190998:1:exon

position:190844:1
position: 190844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190998:1
position: 190998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191573-191692:1:exon

position:191573:1
position: 191573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191692:1
position: 191692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:191783-191878:1:exon

position:191783:1
position: 191783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191878:1
position: 191878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:192196-192295:1:exon

position:192196:1
position: 192196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192295:1
position: 192295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:193972-194155:1:exon

position:193972:1
position: 193972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194155:1
position: 194155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:194372-194527:1:exon

position:194372:1
position: 194372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194527:1
position: 194527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:195263-195496:1:exon

position:195263:1
position: 195263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195496:1
position: 195496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:195590-196096:1:exon

position:195590:1
position: 195590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GCK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GCK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucokinase
translation: MLDHRARMESSRKEKVEQILSEFRLKEEDLKKVMYRMQKEMDRGLKLETHEEASVKMLPTYVRSTPEGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWKVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHRCEVGMIVGTGCNACYMEEMHNVELVEGDEGRMCVNTEWGAFGASGELDEFLLEYDRVVDETSLNPGQQLYEKIIGGKYMGEIVRLVLLKLVDENLLFNGEASEKLKTRGTFETRFMSQIESDSDDRKQIYNILSAFELLPSRTDCEIVRRVCESVSTRAAQMCSAGLAGVINRMRESRSQDTLKITVGVDGSVYKLHPSFKDHFHATVRQLTPGCDITFIQSEEGSGRGAALISAVACKMACMMGQ
SIO_010081: GCK
subclass of: SO_0000673
so part of: GCK
location: join(188384..188428,190561..190723,190844..190998,191573..191692,191783..191878,192196..192295,193972..194155,194372..194527,195263..195496,195590..195734)
location: region:188384-195734:1
so has part: feature:188384-188428:1:exon
so has part: feature:190561-190723:1:exon
so has part: feature:190844-190998:1:exon
so has part: feature:191573-191692:1:exon
so has part: feature:191783-191878:1:exon
so has part: feature:192196-192295:1:exon
so has part: feature:193972-194155:1:exon
so has part: feature:194372-194527:1:exon
so has part: feature:195263-195496:1:exon
so has part: feature:195590-195734:1:exon

XP_005057963.1
type: Protein
SIO_000068: ncbiprotein

position:188384:1
position: 188384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195734:1
position: 195734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188384-188428:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190561-190723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190844-190998:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191573-191692:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191783-191878:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192196-192295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193972-194155:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194372-194527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195263-195496:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195590-195734:1:exon

LOC107604142
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(197664..199854)
location: region:197664-199854:-1
so has part: feature:197664-199854:-1:exon
subclass of: SO_0000010

107604142
type: Gene
SIO_000068: ncbigene

position:197664:-1
position: 197664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199854:-1
position: 199854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197664-199854:-1:exon

LOC107604142
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604142
product: antimicrobial peptide NK-lysin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016303590.1
SIO_010081: LOC107604142
subclass of: SO_0000673
so part of: LOC107604142
location: complement(join(197664..198541,198621..198731,198808..198830,198896..198997,199535..199854))
location: region:197664-199854:-1
so has part: feature:199535-199854:-1:exon
so has part: feature:198896-198997:-1:exon
so has part: feature:198808-198830:-1:exon
so has part: feature:198621-198731:-1:exon
so has part: feature:197664-198541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199535-199854:-1:exon

position:199535:-1
position: 199535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198896-198997:-1:exon

position:198896:-1
position: 198896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198997:-1
position: 198997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198808-198830:-1:exon

position:198808:-1
position: 198808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198830:-1
position: 198830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:198621-198731:-1:exon

position:198621:-1
position: 198621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198731:-1
position: 198731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197664-198541:-1:exon

position:198541:-1
position: 198541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107604142
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antimicrobial peptide NK-lysin-like
translation: MAATFLLLLLLLLGAAQAAAPPPCQGDPMSWCWDMATATHCGWEHQCLHLWDSLALGNVADGESVAQGRGIKCSQCTKILKKIKALAGDDPDEAAVAAALRKGCRVLGRTMGKWCQRLVKKYQDQITEALQNGDMPQDICTAMGFCRS
SIO_010081: LOC107604142
subclass of: SO_0000673
so part of: LOC107604142
location: complement(join(198374..198541,198621..198731,198808..198830,198896..198997,199535..199577))
location: region:198374-199577:-1
so has part: feature:199535-199577:-1:exon
so has part: feature:198896-198997:-1:exon
so has part: feature:198808-198830:-1:exon
so has part: feature:198621-198731:-1:exon
so has part: feature:198374-198541:-1:exon

XP_016159076.1
type: Protein
SIO_000068: ncbiprotein

position:198374:-1
position: 198374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199577:-1
position: 199577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199535-199577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198896-198997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198808-198830:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:198621-198731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198374-198541:-1:exon

POLD2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: POLD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <200932..206570
location: region:200932-206570:1
so has part: feature:200932-206570:1:exon
subclass of: SO_0000010

101805692
type: Gene
SIO_000068: ncbigene

position:200932:1
position: 200932
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:206570:1
position: 206570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200932-206570:1:exon

POLD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: POLD2
product: polymerase (DNA) delta 2, accessory subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_016303587.1
SIO_010081: POLD2
subclass of: SO_0000673
so part of: POLD2
location: join(<200932..201109,203646..203767,204445..204568,204653..204767,204933..205131,205244..205324,205633..205790,205904..206031,206111..206212,206312..206570)
location: region:200932-206570:1
so has part: feature:200932-201109:1:exon
so has part: feature:203646-203767:1:exon
so has part: feature:204445-204568:1:exon
so has part: feature:204653-204767:1:exon
so has part: feature:204933-205131:1:exon
so has part: feature:205244-205324:1:exon
so has part: feature:205633-205790:1:exon
so has part: feature:205904-206031:1:exon
so has part: feature:206111-206212:1:exon
so has part: feature:206312-206570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200932-201109:1:exon

position:201109:1
position: 201109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:203646-203767:1:exon

position:203646:1
position: 203646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203767:1
position: 203767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204445-204568:1:exon

position:204445:1
position: 204445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204568:1
position: 204568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:204653-204767:1:exon

position:204653:1
position: 204653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204767:1
position: 204767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:204933-205131:1:exon

position:204933:1
position: 204933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205131:1
position: 205131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:205244-205324:1:exon

position:205244:1
position: 205244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205324:1
position: 205324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:205633-205790:1:exon

position:205633:1
position: 205633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205790:1
position: 205790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:205904-206031:1:exon

position:205904:1
position: 205904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206031:1
position: 206031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:206111-206212:1:exon

position:206111:1
position: 206111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206212:1
position: 206212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:206312-206570:1:exon

position:206312:1
position: 206312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POLD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: POLD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase delta subunit 2
translation: APPSAEPPTFPRVPVSGYSDCSQPFQLGERGFSRQYAHIYAVRLAGMRPGLERHARSRWGNDIVLRKLSELQAGERCCVVGTLFKSMQLQPSILQEISEEHNLVPQPPLPKYIQPSDELMLEDELQRIKLEGAIDVQRLVTGTIMAVYGCEQDDGRFLVEDHCFAGLPPALPWNGPSSDRFVLLASGLGLGSVSGEALLSTQLLVDVVTGQLGAEGEQSCAAHITRVILAGNLLSQNTQSRDTINKAKYLTKKMQAASVEAVKMLDEILLQLCTSVPVDVMPGEFDPTNYTLPQQPLHRCMLPLASAYATLRLVTNPYQASLDGVRFLGTSGQNISDIFKYSSMDDYLEILEWTLLAGHISPTAPDTLGCYPFYKSDPFILTECPHVYFCGNAPHFQSKLLQGKEGQRVLLVTVPDFSATQTACLVNLRDLTCQPITFSGFGADSEDGDMEVGH
SIO_010081: POLD2
subclass of: SO_0000673
so part of: POLD2
location: join(<200932..201109,203646..203767,204445..204568,204653..204767,204933..205131,205244..205324,205633..205790,205904..206031,206111..206212,206312..206469)
location: region:200932-206469:1
so has part: feature:200932-201109:1:exon
so has part: feature:203646-203767:1:exon
so has part: feature:204445-204568:1:exon
so has part: feature:204653-204767:1:exon
so has part: feature:204933-205131:1:exon
so has part: feature:205244-205324:1:exon
so has part: feature:205633-205790:1:exon
so has part: feature:205904-206031:1:exon
so has part: feature:206111-206212:1:exon
so has part: feature:206312-206469:1:exon

XP_016159073.1
type: Protein
SIO_000068: ncbiprotein

position:206469:1
position: 206469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200932-201109:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:203646-203767:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204445-204568:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:204653-204767:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:204933-205131:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205244-205324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:205633-205790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205904-206031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:206111-206212:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:206312-206469:1:exon

AEBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: AEBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(206578..215184)
location: region:206578-215184:-1
so has part: feature:206578-215184:-1:exon
subclass of: SO_0000010

101817562
type: Gene
SIO_000068: ncbigene

position:206578:-1
position: 206578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215184:-1
position: 215184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206578-215184:-1:exon

AEBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AEBP1
product: AE binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303535.1
SIO_010081: AEBP1
subclass of: SO_0000673
so part of: AEBP1
location: complement(join(206578..207172,207425..207686,207765..207864,207942..208081,208171..208510,208886..209065,209328..209524,209602..209725,210054..210142,210234..210378,210453..210537,210626..210765,210840..210949,211022..211096,211176..211247,211691..211780,211877..211969,212675..212755,212860..212931,213386..213457,213713..214144,214371..214478,215046..215184))
location: region:206578-215184:-1
so has part: feature:215046-215184:-1:exon
so has part: feature:214371-214478:-1:exon
so has part: feature:213713-214144:-1:exon
so has part: feature:213386-213457:-1:exon
so has part: feature:212860-212931:-1:exon
so has part: feature:212675-212755:-1:exon
so has part: feature:211877-211969:-1:exon
so has part: feature:211691-211780:-1:exon
so has part: feature:211176-211247:-1:exon
so has part: feature:211022-211096:-1:exon
so has part: feature:210840-210949:-1:exon
so has part: feature:210626-210765:-1:exon
so has part: feature:210453-210537:-1:exon
so has part: feature:210234-210378:-1:exon
so has part: feature:210054-210142:-1:exon
so has part: feature:209602-209725:-1:exon
so has part: feature:209328-209524:-1:exon
so has part: feature:208886-209065:-1:exon
so has part: feature:208171-208510:-1:exon
so has part: feature:207942-208081:-1:exon
so has part: feature:207765-207864:-1:exon
so has part: feature:207425-207686:-1:exon
so has part: feature:206578-207172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:215046-215184:-1:exon

position:215046:-1
position: 215046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214371-214478:-1:exon

position:214371:-1
position: 214371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214478:-1
position: 214478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213713-214144:-1:exon

position:213713:-1
position: 213713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214144:-1
position: 214144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:213386-213457:-1:exon

position:213386:-1
position: 213386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213457:-1
position: 213457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:212860-212931:-1:exon

position:212860:-1
position: 212860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212931:-1
position: 212931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212675-212755:-1:exon

position:212675:-1
position: 212675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212755:-1
position: 212755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:211877-211969:-1:exon

position:211877:-1
position: 211877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211969:-1
position: 211969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:211691-211780:-1:exon

position:211691:-1
position: 211691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211780:-1
position: 211780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:211176-211247:-1:exon

position:211176:-1
position: 211176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211247:-1
position: 211247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:211022-211096:-1:exon

position:211022:-1
position: 211022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211096:-1
position: 211096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:210840-210949:-1:exon

position:210840:-1
position: 210840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210949:-1
position: 210949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:210626-210765:-1:exon

position:210626:-1
position: 210626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210765:-1
position: 210765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:210453-210537:-1:exon

position:210453:-1
position: 210453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210537:-1
position: 210537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:210234-210378:-1:exon

position:210234:-1
position: 210234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210378:-1
position: 210378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:210054-210142:-1:exon

position:210054:-1
position: 210054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210142:-1
position: 210142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:209602-209725:-1:exon

position:209602:-1
position: 209602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209725:-1
position: 209725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:209328-209524:-1:exon

position:209328:-1
position: 209328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209524:-1
position: 209524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:208886-209065:-1:exon

position:208886:-1
position: 208886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:209065:-1
position: 209065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:208171-208510:-1:exon

position:208171:-1
position: 208171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208510:-1
position: 208510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:207942-208081:-1:exon

position:207942:-1
position: 207942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208081:-1
position: 208081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:207765-207864:-1:exon

position:207765:-1
position: 207765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207864:-1
position: 207864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:207425-207686:-1:exon

position:207425:-1
position: 207425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207686:-1
position: 207686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:206578-207172:-1:exon

position:207172:-1
position: 207172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AEBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AEBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adipocyte enhancer-binding protein 1
translation: MAVPFRAISVPLSASAASVPSRSRPRPLHRPRPARPGLSGLSGSGAAPGFLGPGDGGDRDGDGTELGFDTHLDISTVPGTGTGSPGLLTEPEKPRKGKKEKPPKKPKERPRGPKKDKDKDKDKDKDKVKEKDRGKKEKPPKKSKEKPLKGSEKPPKGSEKTPKGSKKPKEKPPKATKPSGKKPPVPPSPPTERPPTLQPSQGEEDEETPGFLKPLRNKEEEDGGVRGELEEPPNERWGLDREGWNPEPQPEVPEEPEPPTLDYNEQLEREDYEDFEYIRRQQKPPKPPSRRRPERVWPQPEAPPPPPQPPPQPPVPGPVTEGDYGEGFDYDDWTYGLPPPTKPHEHLDKEDRLETDEEKIRPLKPKKEEEEEEEEHWAEEKGQDRKGKPKKPGGKKWDPDEEEWAPPAEKKRCPPIGLESHRIEDDQILASSMLRHGLGAQRGRLNMQAGTNEDDFFDGAWCAEDDSRAHWLEVDTRRITMFTGVITQGRDSQIHDDFVTSFYVGFSNDSQHWVMYSNGYEEMMFYGNVDKDTPVLSEFPEPVVARYIRIYPQRWNGSLCLRLEVLGCPLSAVSSYYTQQNEVTSTDNLDFRHHSYKDMRQLMKVVNEECPTITRIYNIGKSSRGLKIYAMEVSDNPGEHETGEPEFRYTAGLHGNEALGRELLLLLMQFLCKEYQDGNPRVRGLVTDTRIHLIPSLNPDGYELAHEAGSELGNWALGHWTEEGFDLFENFPDLATALWAAEERRLVPHQFPNHHIPIPEHYLSEDAAVAVETRAVMTWMDKNPFVLGANLQGGEKLVSFPFDTARPSPPTPAAAPRPLDYEDERPELQEAPDHAVFRWLAISYASAHLTMTETFRGGCHAQDVTDAMGIVQGAKWHPRAGSMNDFSYLHTNCLELSIYLGCDKFPHESELQQEWENNKESLLTFMEQIHRGIKGVVTDQQGEPIANATIVVGGINHNVRTASGGDYWRILNPGEYRVSARAEGYNPSVKTCHVLYDIGATQCNFILSRSNWKRIREIMAMNGNRPIRRVVPGRPMTPRERLRLRLRPRLRLRRLNATTATSSPTAPPSTTALPFPFSSTAYAPWSQEPPTAGTWEMDTETEVVTELVTETEGWELHTGTAQPLTTAETYTVNFGD
SIO_010081: AEBP1
subclass of: SO_0000673
so part of: AEBP1
location: complement(join(206908..207172,207425..207686,207765..207864,207942..208081,208171..208510,208886..209065,209328..209524,209602..209725,210054..210142,210234..210378,210453..210537,210626..210765,210840..210949,211022..211096,211176..211247,211691..211780,211877..211969,212675..212755,212860..212931,213386..213457,213713..214144,214371..214478,215046..215184))
location: region:206908-215184:-1
so has part: feature:215046-215184:-1:exon
so has part: feature:214371-214478:-1:exon
so has part: feature:213713-214144:-1:exon
so has part: feature:213386-213457:-1:exon
so has part: feature:212860-212931:-1:exon
so has part: feature:212675-212755:-1:exon
so has part: feature:211877-211969:-1:exon
so has part: feature:211691-211780:-1:exon
so has part: feature:211176-211247:-1:exon
so has part: feature:211022-211096:-1:exon
so has part: feature:210840-210949:-1:exon
so has part: feature:210626-210765:-1:exon
so has part: feature:210453-210537:-1:exon
so has part: feature:210234-210378:-1:exon
so has part: feature:210054-210142:-1:exon
so has part: feature:209602-209725:-1:exon
so has part: feature:209328-209524:-1:exon
so has part: feature:208886-209065:-1:exon
so has part: feature:208171-208510:-1:exon
so has part: feature:207942-208081:-1:exon
so has part: feature:207765-207864:-1:exon
so has part: feature:207425-207686:-1:exon
so has part: feature:206908-207172:-1:exon

XP_016159021.1
type: Protein
SIO_000068: ncbiprotein

position:206908:-1
position: 206908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215046-215184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214371-214478:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213713-214144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:213386-213457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:212860-212931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212675-212755:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211877-211969:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:211691-211780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:211176-211247:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:211022-211096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210840-210949:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210626-210765:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:210453-210537:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:210234-210378:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:210054-210142:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:209602-209725:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:209328-209524:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:208886-209065:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:208171-208510:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:207942-208081:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:207765-207864:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:207425-207686:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:206908-207172:-1:exon

DBNL
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DBNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(220022..230345)
location: region:220022-230345:-1
so has part: feature:220022-230345:-1:exon
subclass of: SO_0000010

101817758
type: Gene
SIO_000068: ncbigene

position:220022:-1
position: 220022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230345:-1
position: 230345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220022-230345:-1:exon

DBNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DBNL
product: drebrin like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303581.1
SIO_010081: DBNL
subclass of: SO_0000673
so part of: DBNL
location: complement(join(220022..220831,221134..221239,222205..222308,223307..223417,224689..224791,224877..224948,225436..225490,226185..226336,226843..226920,227520..227666,227928..228002,228251..228363,230131..230345))
location: region:220022-230345:-1
so has part: feature:230131-230345:-1:exon
so has part: feature:228251-228363:-1:exon
so has part: feature:227928-228002:-1:exon
so has part: feature:227520-227666:-1:exon
so has part: feature:226843-226920:-1:exon
so has part: feature:226185-226336:-1:exon
so has part: feature:225436-225490:-1:exon
so has part: feature:224877-224948:-1:exon
so has part: feature:224689-224791:-1:exon
so has part: feature:223307-223417:-1:exon
so has part: feature:222205-222308:-1:exon
so has part: feature:221134-221239:-1:exon
so has part: feature:220022-220831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230131-230345:-1:exon

position:230131:-1
position: 230131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228251-228363:-1:exon

position:228251:-1
position: 228251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228363:-1
position: 228363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227928-228002:-1:exon

position:227928:-1
position: 227928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228002:-1
position: 228002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:227520-227666:-1:exon

position:227520:-1
position: 227520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227666:-1
position: 227666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:226843-226920:-1:exon

position:226843:-1
position: 226843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226920:-1
position: 226920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:226185-226336:-1:exon

position:226185:-1
position: 226185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226336:-1
position: 226336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:225436-225490:-1:exon

position:225436:-1
position: 225436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225490:-1
position: 225490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:224877-224948:-1:exon

position:224877:-1
position: 224877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224948:-1
position: 224948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:224689-224791:-1:exon

position:224689:-1
position: 224689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224791:-1
position: 224791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:223307-223417:-1:exon

position:223307:-1
position: 223307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223417:-1
position: 223417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:222205-222308:-1:exon

position:222205:-1
position: 222205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222308:-1
position: 222308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:221134-221239:-1:exon

position:221134:-1
position: 221134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221239:-1
position: 221239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:220022-220831:-1:exon

position:220831:-1
position: 220831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DBNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DBNL
product: drebrin like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303580.1
SIO_010081: DBNL
subclass of: SO_0000673
so part of: DBNL
location: complement(join(220022..220831,221134..221239,222205..222308,223307..223417,224689..224791,224877..224951,225436..225490,226185..226336,226843..226920,227520..227666,227928..228002,228251..228363,230131..230345))
location: region:220022-230345:-1
so has part: feature:230131-230345:-1:exon
so has part: feature:228251-228363:-1:exon
so has part: feature:227928-228002:-1:exon
so has part: feature:227520-227666:-1:exon
so has part: feature:226843-226920:-1:exon
so has part: feature:226185-226336:-1:exon
so has part: feature:225436-225490:-1:exon
so has part: feature:224877-224951:-1:exon
so has part: feature:224689-224791:-1:exon
so has part: feature:223307-223417:-1:exon
so has part: feature:222205-222308:-1:exon
so has part: feature:221134-221239:-1:exon
so has part: feature:220022-220831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230131-230345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228251-228363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227928-228002:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:227520-227666:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226843-226920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226185-226336:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:225436-225490:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224877-224951:-1:exon

position:224951:-1
position: 224951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:224689-224791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223307-223417:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:222205-222308:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:221134-221239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:220022-220831:-1:exon

DBNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DBNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: drebrin-like protein isoform X2
translation: MVEELNSGKVMYGFCRVKDPNSGLPKYVLVNWTGEGVNDVRKGACANHVSTVANFLKGAHVTINARAEEDVEPELIMEKVAKASGANYSFHKESSKFQDSGPQAPVGSVYQKTNAMSEIKRVNKDNFWAKAEKDEENRRLEEKRRAEEERQRRERERRERELQEAAGREQMFKARSSEIEAQKRLQQQQEAENRDREQQQWERAEEHEAQQRKGVRRSESVEKAQEAAALVAQRAVNPRDIFKQRERAGPGDTGVPAQPGKLRSPFLQKEMNSVPTPASPSRDVWGSPPASPLPAAGRDSGYNSGVPGSHMEESLYEEPPEPSAIYEEPPQEQVDDAKYDYGVEYQEPPDLAGKGLCARALYDYQAADDTEISFDPENIITNIEMIDEGWWRGYGPDGHFGMFPANYVELLE
SIO_010081: DBNL
subclass of: SO_0000673
so part of: DBNL
location: complement(join(220692..220831,221134..221239,222205..222308,223307..223417,224689..224791,224877..224948,225436..225490,226185..226336,226843..226920,227520..227666,227928..228002,228251..228346))
location: region:220692-228346:-1
so has part: feature:228251-228346:-1:exon
so has part: feature:227928-228002:-1:exon
so has part: feature:227520-227666:-1:exon
so has part: feature:226843-226920:-1:exon
so has part: feature:226185-226336:-1:exon
so has part: feature:225436-225490:-1:exon
so has part: feature:224877-224948:-1:exon
so has part: feature:224689-224791:-1:exon
so has part: feature:223307-223417:-1:exon
so has part: feature:222205-222308:-1:exon
so has part: feature:221134-221239:-1:exon
so has part: feature:220692-220831:-1:exon

XP_016159067.1
type: Protein
SIO_000068: ncbiprotein

position:220692:-1
position: 220692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228346:-1
position: 228346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:228251-228346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227928-228002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227520-227666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226843-226920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226185-226336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:225436-225490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:224877-224948:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224689-224791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:223307-223417:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:222205-222308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:221134-221239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:220692-220831:-1:exon

DBNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DBNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: drebrin-like protein isoform X1
translation: MVEELNSGKVMYGFCRVKDPNSGLPKYVLVNWTGEGVNDVRKGACANHVSTVANFLKGAHVTINARAEEDVEPELIMEKVAKASGANYSFHKESSKFQDSGPQAPVGSVYQKTNAMSEIKRVNKDNFWAKAEKDEENRRLEEKRRAEEERQRRERERRERELQEAAGREQMFKARSSEIEAQKRLQQQQEAENRDREQQQWKERAEEHEAQQRKGVRRSESVEKAQEAAALVAQRAVNPRDIFKQRERAGPGDTGVPAQPGKLRSPFLQKEMNSVPTPASPSRDVWGSPPASPLPAAGRDSGYNSGVPGSHMEESLYEEPPEPSAIYEEPPQEQVDDAKYDYGVEYQEPPDLAGKGLCARALYDYQAADDTEISFDPENIITNIEMIDEGWWRGYGPDGHFGMFPANYVELLE
SIO_010081: DBNL
subclass of: SO_0000673
so part of: DBNL
location: complement(join(220692..220831,221134..221239,222205..222308,223307..223417,224689..224791,224877..224951,225436..225490,226185..226336,226843..226920,227520..227666,227928..228002,228251..228346))
location: region:220692-228346:-1
so has part: feature:228251-228346:-1:exon
so has part: feature:227928-228002:-1:exon
so has part: feature:227520-227666:-1:exon
so has part: feature:226843-226920:-1:exon
so has part: feature:226185-226336:-1:exon
so has part: feature:225436-225490:-1:exon
so has part: feature:224877-224951:-1:exon
so has part: feature:224689-224791:-1:exon
so has part: feature:223307-223417:-1:exon
so has part: feature:222205-222308:-1:exon
so has part: feature:221134-221239:-1:exon
so has part: feature:220692-220831:-1:exon

XP_016159066.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:228251-228346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227928-228002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227520-227666:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226843-226920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226185-226336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:225436-225490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:224877-224951:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224689-224791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:223307-223417:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:222205-222308:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:221134-221239:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:220692-220831:-1:exon

TCF7L1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TCF7L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 249789..259793
location: region:249789-259793:1
so has part: feature:249789-259793:1:exon
subclass of: SO_0000010

101817952
type: Gene
SIO_000068: ncbigene

position:249789:1
position: 249789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259793:1
position: 259793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249789-259793:1:exon

TCF7L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TCF7L1
product: transcription factor 7 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303536.1
SIO_010081: TCF7L1
subclass of: SO_0000673
so part of: TCF7L1
location: join(249789..250067,250409..250541,250910..251012,251293..251376,251893..252036,252113..252272,252648..252755,252942..253004,254847..254866,259562..259793)
location: region:249789-259793:1
so has part: feature:249789-250067:1:exon
so has part: feature:250409-250541:1:exon
so has part: feature:250910-251012:1:exon
so has part: feature:251293-251376:1:exon
so has part: feature:251893-252036:1:exon
so has part: feature:252113-252272:1:exon
so has part: feature:252648-252755:1:exon
so has part: feature:252942-253004:1:exon
so has part: feature:254847-254866:1:exon
so has part: feature:259562-259793:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249789-250067:1:exon

position:250067:1
position: 250067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:250409-250541:1:exon

position:250409:1
position: 250409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250541:1
position: 250541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:250910-251012:1:exon

position:250910:1
position: 250910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251012:1
position: 251012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:251293-251376:1:exon

position:251293:1
position: 251293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251376:1
position: 251376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:251893-252036:1:exon

position:251893:1
position: 251893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252036:1
position: 252036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:252113-252272:1:exon

position:252113:1
position: 252113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252272:1
position: 252272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:252648-252755:1:exon

position:252648:1
position: 252648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252755:1
position: 252755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:252942-253004:1:exon

position:252942:1
position: 252942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253004:1
position: 253004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:254847-254866:1:exon

position:254847:1
position: 254847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:254866:1
position: 254866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:259562-259793:1:exon

position:259562:1
position: 259562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TCF7L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TCF7L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor 7-like 1
translation: MFQDWCSVVGQEFFWGQGYPRLLEGIVPSLPQYLQMKWPLLDVPTGATLKDNRSPSPAHLSNKVPVVQHAHHVHPLTPLITYSSEPFPPGSPPGHLSPEIDPKTGIPRPPHPPELPSYYPLSPGAVGQLPHPLGWLVPQQGQPVYSIPAGGFRHPYPALAMNASMSSLMSSRFSPHMVPPPTHGLHPSGIPHPTIVAPIVKQEPSQPSASPAGSSKSPVAVKKEEEKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHSLSREEQAKYYELARKERQLHSQLYPTWSARDNYGKKKKRKREKLAQQQQQQQPSTYMKLHRGLPKPRPQTEQTPPHRYGHAHAGASTAPFSAPPLRGPSLARRLKSRPVPLSLRPPGSSRQLPAAARSREIRARKRR
SIO_010081: TCF7L1
subclass of: SO_0000673
so part of: TCF7L1
location: join(249888..250067,250409..250541,250910..251012,251293..251376,251893..252036,252113..252272,252648..252755,252942..253004,254847..254866,259562..259793)
location: region:249888-259793:1
so has part: feature:249888-250067:1:exon
so has part: feature:250409-250541:1:exon
so has part: feature:250910-251012:1:exon
so has part: feature:251293-251376:1:exon
so has part: feature:251893-252036:1:exon
so has part: feature:252113-252272:1:exon
so has part: feature:252648-252755:1:exon
so has part: feature:252942-253004:1:exon
so has part: feature:254847-254866:1:exon
so has part: feature:259562-259793:1:exon

XP_016159022.1
type: Protein
SIO_000068: ncbiprotein

position:249888:1
position: 249888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249888-250067:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:250409-250541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:250910-251012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251293-251376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:251893-252036:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:252113-252272:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:252648-252755:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252942-253004:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:254847-254866:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:259562-259793:1:exon

TGOLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TGOLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 259780..265062
location: region:259780-265062:1
so has part: feature:259780-265062:1:exon
subclass of: SO_0000010

101806004
type: Gene
SIO_000068: ncbigene

position:259780:1
position: 259780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265062:1
position: 265062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259780-265062:1:exon

TGOLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TGOLN2
product: trans-golgi network protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005057911.2
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259780..259882,260272..260715,260776..261599,262105..262188,262702..265062)
location: region:259780-265062:1
so has part: feature:259780-259882:1:exon
so has part: feature:260272-260715:1:exon
so has part: feature:260776-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-265062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259780-259882:1:exon

position:259882:1
position: 259882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:260272-260715:1:exon

position:260272:1
position: 260272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260715:1
position: 260715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260776-261599:1:exon

position:260776:1
position: 260776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261599:1
position: 261599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:262105-262188:1:exon

position:262105:1
position: 262105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262188:1
position: 262188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262702-265062:1:exon

position:262702:1
position: 262702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TGOLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TGOLN2
product: trans-golgi network protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303577.1
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259780..259882,260272..260707,260855..261599,262105..262188,262702..265062)
location: region:259780-265062:1
so has part: feature:259780-259882:1:exon
so has part: feature:260272-260707:1:exon
so has part: feature:260855-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-265062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259780-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260272-260707:1:exon

position:260707:1
position: 260707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260855-261599:1:exon

position:260855:1
position: 260855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262702-265062:1:exon

TGOLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TGOLN2
product: trans-golgi network protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005057912.2
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259780..259882,260272..260676,260824..261599,262105..262188,262702..265062)
location: region:259780-265062:1
so has part: feature:259780-259882:1:exon
so has part: feature:260272-260676:1:exon
so has part: feature:260824-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-265062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259780-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260272-260676:1:exon

position:260676:1
position: 260676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260824-261599:1:exon

position:260824:1
position: 260824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262702-265062:1:exon

TGOLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TGOLN2
product: trans-golgi network protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016303576.1
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259780..259882,260272..261599,262105..262188,262702..265061)
location: region:259780-265061:1
so has part: feature:259780-259882:1:exon
so has part: feature:260272-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-265061:1:exon

position:265061:1
position: 265061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259780-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260272-261599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262702-265061:1:exon

TGOLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TGOLN2
product: trans-golgi network protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005057909.2
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259780..259882,260275..261599,262105..262188,262702..265061)
location: region:259780-265061:1
so has part: feature:259780-259882:1:exon
so has part: feature:260275-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-265061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259780-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260275-261599:1:exon

position:260275:1
position: 260275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262702-265061:1:exon

TGOLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TGOLN2
product: trans-golgi network protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005057910.2
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259780..259882,260311..261599,262105..262188,262702..265061)
location: region:259780-265061:1
so has part: feature:259780-259882:1:exon
so has part: feature:260311-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-265061:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:259780-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260311-261599:1:exon

position:260311:1
position: 260311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262702-265061:1:exon

TGOLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TGOLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-Golgi network integral membrane protein 2 isoform X1
translation: MEAPRPVLLLLALLGLLLLLRLRAAAETSQTHTGQSSAVPEAAETAGADDDQDHRSLFTDNRGEKDKSSNGDFQTDLSDGTRVDDEQKTNEEQNDDILIGNGSNEEERENEGGQGANEIGESGNAGGRGQRDEDQNSSNGNTGSDDQGVAGTNTGGQSNPGSGTSGQGSTTNTGGQDGAGTSTGGQGGAGTNTGGQGGAGTSTGGQSSPGSGTSGQGSTTNTGGQDGTGTSTGGQGNPSSGTGDQGSTDTGTGGKTDSHNNNEQSTEQEGSVNKNSQDGSQAGSPGKGGTKENSSEKNNPGTGKSGGDKDSGNTNGSSTQDSTNNDQGSSDKSRAGTQGSEASNGHINGVTSQGSSGGQQAQTETQGSAGESQGTAGGEQPQGQDNVENSQEDQSPGAHSTVEENEENTAEDVADAEEGRDTSSDQDRGKSVPSLPRARSESSHFFAYLVTTAIIVAALYVAYHNKRKIIAFALEGKRSKTGRRPKSGDYQRLDQKI
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259807..259882,260272..261599,262105..262188,262702..262707)
location: region:259807-262707:1
so has part: feature:259807-259882:1:exon
so has part: feature:260272-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-262707:1:exon

XP_016159062.1
type: Protein
SIO_000068: ncbiprotein

position:259807:1
position: 259807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262707:1
position: 262707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259807-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260272-261599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262702-262707:1:exon

TGOLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TGOLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-Golgi network integral membrane protein 2 isoform X4
translation: MEAPRPVLLLLALLGLLLLLRLRAAAETSQTHTGQSSAVPEAAETAGADDDQDHRSLFTDNRGEKDKSSNGDFQTDLSDGTRVDDEQKTNEEQNDDILIGNGSNEEERENEGGQGANEIGESGNAGGRGQRDEDQNSSNGNTGSDDQGVAGTNTGGQSNPGSGTSGQGSTTNTGGQGGAGTSTGGQSSPGSGTSGQGSTTNTGGQDGTGTSTGGQGNPSSGTGDQGSTDTGTGGKTDSHNNNEQSTEQEGSVNKNSQDGSQAGSPGKGGTKENSSEKNNPGTGKSGGDKDSGNTNGSSTQDSTNNDQGSSDKSRAGTQGSEASNGHINGVTSQGSSGGQQAQTETQGSAGESQGTAGGEQPQGQDNVENSQEDQSPGAHSTVEENEENTAEDVADAEEGRDTSSDQDRGKSVPSLPRARSESSHFFAYLVTTAIIVAALYVAYHNKRKIIAFALEGKRSKTGRRPKSGDYQRLDQKI
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259807..259882,260272..260715,260776..261599,262105..262188,262702..262707)
location: region:259807-262707:1
so has part: feature:259807-259882:1:exon
so has part: feature:260272-260715:1:exon
so has part: feature:260776-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-262707:1:exon

XP_005057968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259807-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260272-260715:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260776-261599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262702-262707:1:exon

TGOLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TGOLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-Golgi network integral membrane protein 2 isoform X5
translation: MEAPRPVLLLLALLGLLLLLRLRAAAETSQTHTGQSSAVPEAAETAGADDDQDHRSLFTDNRGEKDKSSNGDFQTDLSDGTRVDDEQKTNEEQNDDILIGNGSNEEERENEGGQGANEIGESGNAGGRGQRDEDQNSSNGNTGSDDQGVAGTNTGGQSNPGSGTSGQGSTTNTGGQDGTGTSTGGQGNPSSGTGDQGSTDTGTGGKTDSHNNNEQSTEQEGSVNKNSQDGSQAGSPGKGGTKENSSEKNNPGTGKSGGDKDSGNTNGSSTQDSTNNDQGSSDKSRAGTQGSEASNGHINGVTSQGSSGGQQAQTETQGSAGESQGTAGGEQPQGQDNVENSQEDQSPGAHSTVEENEENTAEDVADAEEGRDTSSDQDRGKSVPSLPRARSESSHFFAYLVTTAIIVAALYVAYHNKRKIIAFALEGKRSKTGRRPKSGDYQRLDQKI
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259807..259882,260272..260707,260855..261599,262105..262188,262702..262707)
location: region:259807-262707:1
so has part: feature:259807-259882:1:exon
so has part: feature:260272-260707:1:exon
so has part: feature:260855-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-262707:1:exon

XP_016159063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259807-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260272-260707:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260855-261599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262702-262707:1:exon

TGOLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TGOLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-Golgi network integral membrane protein 2 isoform X6
translation: MEAPRPVLLLLALLGLLLLLRLRAAAETSQTHTGQSSAVPEAAETAGADDDQDHRSLFTDNRGEKDKSSNGDFQTDLSDGTRVDDEQKTNEEQNDDILIGNGSNEEERENEGGQGANEIGESGNAGGRGQRDEDQNSSNGNTGSDDQGVAGTNTGGQSNPGSGTSGQGSTTNTGGQDGTGTSTGGQGNPSSGTGDQGSTDTGTGGKTDSHNNNEQSTEQEGSVNKNSQDGSQAGSPGKGGTKENSSEKNNPGTGKSGGDKDSGNTNGSSTQDSTNNDQGSSDKSRAGTQGSEASNGHINGVTSQGSSGGQQAQTETQGSAGESQGTAGGEQPQGQDNVENSQEDQSPGAHSTVEENEENTAEDVADAEEGRDTSSDQDRGKSVPSLPRARSESSHFFAYLVTTAIIVAALYVAYHNKRKIIAFALEGKRSKTGRRPKSGDYQRLDQKI
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259807..259882,260272..260676,260824..261599,262105..262188,262702..262707)
location: region:259807-262707:1
so has part: feature:259807-259882:1:exon
so has part: feature:260272-260676:1:exon
so has part: feature:260824-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-262707:1:exon

XP_005057969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259807-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260272-260676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260824-261599:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262702-262707:1:exon

TGOLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TGOLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-Golgi network integral membrane protein 2 isoform X2
translation: MEAPRPVLLLLALLGLLLLLRLRAAETSQTHTGQSSAVPEAAETAGADDDQDHRSLFTDNRGEKDKSSNGDFQTDLSDGTRVDDEQKTNEEQNDDILIGNGSNEEERENEGGQGANEIGESGNAGGRGQRDEDQNSSNGNTGSDDQGVAGTNTGGQSNPGSGTSGQGSTTNTGGQDGAGTSTGGQGGAGTNTGGQGGAGTSTGGQSSPGSGTSGQGSTTNTGGQDGTGTSTGGQGNPSSGTGDQGSTDTGTGGKTDSHNNNEQSTEQEGSVNKNSQDGSQAGSPGKGGTKENSSEKNNPGTGKSGGDKDSGNTNGSSTQDSTNNDQGSSDKSRAGTQGSEASNGHINGVTSQGSSGGQQAQTETQGSAGESQGTAGGEQPQGQDNVENSQEDQSPGAHSTVEENEENTAEDVADAEEGRDTSSDQDRGKSVPSLPRARSESSHFFAYLVTTAIIVAALYVAYHNKRKIIAFALEGKRSKTGRRPKSGDYQRLDQKI
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259807..259882,260275..261599,262105..262188,262702..262707)
location: region:259807-262707:1
so has part: feature:259807-259882:1:exon
so has part: feature:260275-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-262707:1:exon

XP_005057966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259807-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260275-261599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262702-262707:1:exon

TGOLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TGOLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-Golgi network integral membrane protein 2 isoform X3
translation: MEAPRPVLLLLALLGLLLLLRLRAAVPEAAETAGADDDQDHRSLFTDNRGEKDKSSNGDFQTDLSDGTRVDDEQKTNEEQNDDILIGNGSNEEERENEGGQGANEIGESGNAGGRGQRDEDQNSSNGNTGSDDQGVAGTNTGGQSNPGSGTSGQGSTTNTGGQDGAGTSTGGQGGAGTNTGGQGGAGTSTGGQSSPGSGTSGQGSTTNTGGQDGTGTSTGGQGNPSSGTGDQGSTDTGTGGKTDSHNNNEQSTEQEGSVNKNSQDGSQAGSPGKGGTKENSSEKNNPGTGKSGGDKDSGNTNGSSTQDSTNNDQGSSDKSRAGTQGSEASNGHINGVTSQGSSGGQQAQTETQGSAGESQGTAGGEQPQGQDNVENSQEDQSPGAHSTVEENEENTAEDVADAEEGRDTSSDQDRGKSVPSLPRARSESSHFFAYLVTTAIIVAALYVAYHNKRKIIAFALEGKRSKTGRRPKSGDYQRLDQKI
SIO_010081: TGOLN2
subclass of: SO_0000673
so part of: TGOLN2
location: join(259807..259882,260311..261599,262105..262188,262702..262707)
location: region:259807-262707:1
so has part: feature:259807-259882:1:exon
so has part: feature:260311-261599:1:exon
so has part: feature:262105-262188:1:exon
so has part: feature:262702-262707:1:exon

XP_005057967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259807-259882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260311-261599:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262105-262188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262702-262707:1:exon

RETSAT
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RETSAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(269367..275989)
location: region:269367-275989:-1
so has part: feature:269367-275989:-1:exon
subclass of: SO_0000010

101818337
type: Gene
SIO_000068: ncbigene

position:269367:-1
position: 269367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275989:-1
position: 275989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269367-275989:-1:exon

RETSAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RETSAT
product: retinol saturase (all-trans-retinol 13,14-reductase)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005057978.2
SIO_010081: RETSAT
subclass of: SO_0000673
so part of: RETSAT
location: complement(join(269367..270182,270601..270760,271110..271276,271532..271641,271786..271924,272465..272584,272682..272879,273354..273555,274055..274299,274863..275045,275266..275414,275880..275989))
location: region:269367-275989:-1
so has part: feature:275880-275989:-1:exon
so has part: feature:275266-275414:-1:exon
so has part: feature:274863-275045:-1:exon
so has part: feature:274055-274299:-1:exon
so has part: feature:273354-273555:-1:exon
so has part: feature:272682-272879:-1:exon
so has part: feature:272465-272584:-1:exon
so has part: feature:271786-271924:-1:exon
so has part: feature:271532-271641:-1:exon
so has part: feature:271110-271276:-1:exon
so has part: feature:270601-270760:-1:exon
so has part: feature:269367-270182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275880-275989:-1:exon

position:275880:-1
position: 275880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275266-275414:-1:exon

position:275266:-1
position: 275266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275414:-1
position: 275414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274863-275045:-1:exon

position:274863:-1
position: 274863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275045:-1
position: 275045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:274055-274299:-1:exon

position:274055:-1
position: 274055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274299:-1
position: 274299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273354-273555:-1:exon

position:273354:-1
position: 273354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273555:-1
position: 273555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:272682-272879:-1:exon

position:272682:-1
position: 272682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272879:-1
position: 272879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:272465-272584:-1:exon

position:272465:-1
position: 272465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272584:-1
position: 272584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:271786-271924:-1:exon

position:271786:-1
position: 271786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271924:-1
position: 271924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:271532-271641:-1:exon

position:271532:-1
position: 271532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271641:-1
position: 271641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:271110-271276:-1:exon

position:271110:-1
position: 271110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271276:-1
position: 271276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:270601-270760:-1:exon

position:270601:-1
position: 270601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270760:-1
position: 270760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:269367-270182:-1:exon

position:270182:-1
position: 270182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RETSAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RETSAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: all-trans-retinol 13,14-reductase
translation: MSLPAPTSARSQSGLPAPSACFPFPVSSSQNRSARPRPPPPPPPPPLLFLLLPLLSSSRNPFATDTRRPPAPLVTDKAVRRTVVKTVFSAEKVPQKLDAIVVGSGIGGLAAAALLAKAGWRVLVLDQHGKLGGCCHTFTEKGFEFDTGIHYVGQMEEGSLMRFLVDQLTDGQLEWAPLPATFDAVVLGDPQGAGKTFHIHAGKREYFQRLKEQFPGEAAAIDEFQRLVKSASRGVVLLGILKMLPRFLARLLIHSRLLPRLCSFSHLASRSVKEVVDGLTPNPELRAVLSYIFPTYGVLPSKASFSMHSILVSHFLRGAWYPKGGAGEIAFHTIPVIRKAGGNVFGKAPVQRILLDAQGRACGVSVKKGQDSVEIFAPVIISDAGIFNTYERLLPAEARALPEIQSQLRMVTPGEGGFTVFVGLNGSREELGLEPTNYFMFPGNDLDGMMKRYLASSRDEAANNIPLLFVTSPSSKDPTWQMRHPGKSTLAIVTFARYEWFEEWKDKQVHKRGDDYEDLKKTFVDAIMQTVFKLYPRIEGRIEYLSGGTPLTNQHYIASPHGEFYGIDHGIPRLQAEAIAAMRADTAVPNLYLTGQDLCLGGFMGALQGALVCVSTILKRNLYADVAKLKMRLQATNSKKGD
SIO_010081: RETSAT
subclass of: SO_0000673
so part of: RETSAT
location: complement(join(270037..270182,270601..270760,271110..271276,271532..271641,271786..271924,272465..272584,272682..272879,273354..273555,274055..274299,274863..275045,275266..275414,275880..275989))
location: region:270037-275989:-1
so has part: feature:275880-275989:-1:exon
so has part: feature:275266-275414:-1:exon
so has part: feature:274863-275045:-1:exon
so has part: feature:274055-274299:-1:exon
so has part: feature:273354-273555:-1:exon
so has part: feature:272682-272879:-1:exon
so has part: feature:272465-272584:-1:exon
so has part: feature:271786-271924:-1:exon
so has part: feature:271532-271641:-1:exon
so has part: feature:271110-271276:-1:exon
so has part: feature:270601-270760:-1:exon
so has part: feature:270037-270182:-1:exon

XP_005058035.1
type: Protein
SIO_000068: ncbiprotein

position:270037:-1
position: 270037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275880-275989:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275266-275414:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274863-275045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274055-274299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273354-273555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272682-272879:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272465-272584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:271786-271924:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:271532-271641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:271110-271276:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:270601-270760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:270037-270182:-1:exon

ELMOD3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ELMOD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 275868..282606
location: region:275868-282606:1
so has part: feature:275868-282606:1:exon
subclass of: SO_0000010

107604140
type: Gene
SIO_000068: ncbigene

position:275868:1
position: 275868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282606:1
position: 282606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275868-282606:1:exon

ELMOD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ELMOD3
product: ELMO domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303582.1
SIO_010081: ELMOD3
subclass of: SO_0000673
so part of: ELMOD3
location: join(275868..275969,276884..277129,277226..277295,277605..277667,277905..277996,278230..278353,278965..279087,279676..279806,280326..280402,280908..281035,281633..282606)
location: region:275868-282606:1
so has part: feature:275868-275969:1:exon
so has part: feature:276884-277129:1:exon
so has part: feature:277226-277295:1:exon
so has part: feature:277605-277667:1:exon
so has part: feature:277905-277996:1:exon
so has part: feature:278230-278353:1:exon
so has part: feature:278965-279087:1:exon
so has part: feature:279676-279806:1:exon
so has part: feature:280326-280402:1:exon
so has part: feature:280908-281035:1:exon
so has part: feature:281633-282606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275868-275969:1:exon

position:275969:1
position: 275969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276884-277129:1:exon

position:276884:1
position: 276884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277129:1
position: 277129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:277226-277295:1:exon

position:277226:1
position: 277226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277295:1
position: 277295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:277605-277667:1:exon

position:277605:1
position: 277605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277667:1
position: 277667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277905-277996:1:exon

position:277905:1
position: 277905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277996:1
position: 277996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:278230-278353:1:exon

position:278230:1
position: 278230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278353:1
position: 278353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:278965-279087:1:exon

position:278965:1
position: 278965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279087:1
position: 279087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:279676-279806:1:exon

position:279676:1
position: 279676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279806:1
position: 279806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:280326-280402:1:exon

position:280326:1
position: 280326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280402:1
position: 280402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:280908-281035:1:exon

position:280908:1
position: 280908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281035:1
position: 281035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:281633-282606:1:exon

position:281633:1
position: 281633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELMOD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ELMOD3
product: ELMO domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016303583.1
SIO_010081: ELMOD3
subclass of: SO_0000673
so part of: ELMOD3
location: join(276500..276943,277061..277129,277226..277295,277605..277667,277905..277996,278230..278353,278965..279087,279676..279806,280326..280402,280908..281035,281633..282606)
location: region:276500-282606:1
so has part: feature:276500-276943:1:exon
so has part: feature:277061-277129:1:exon
so has part: feature:277226-277295:1:exon
so has part: feature:277605-277667:1:exon
so has part: feature:277905-277996:1:exon
so has part: feature:278230-278353:1:exon
so has part: feature:278965-279087:1:exon
so has part: feature:279676-279806:1:exon
so has part: feature:280326-280402:1:exon
so has part: feature:280908-281035:1:exon
so has part: feature:281633-282606:1:exon

position:276500:1
position: 276500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276500-276943:1:exon

position:276943:1
position: 276943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:277061-277129:1:exon

position:277061:1
position: 277061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:277226-277295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277605-277667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277905-277996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278230-278353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278965-279087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279676-279806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280326-280402:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280908-281035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:281633-282606:1:exon

ELMOD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ELMOD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 3 isoform X1
translation: MSGAAGSERPEERQRAVPPASPRPCVPGRSPPSRRPQGLSLQGSRPPLPLIAPFLPLQPQKIILGVQTPLKGPEPLSRGAQIPALGQEGVLQELLLGAGQSPDPGISEEQQQAREEWEALEEIQSGLGGTSGSSPPPISFTEALQHFQSAELSGSRGKVRAPRRRGILGALLHCLCGPPQLQPQLREEQELALAMAHCALDDSERVHMRILQTIYQQLTRSRLGCPRYGAHWEELGFQGADPGTDLRGTGMLGLMQILFFVLDSRLLPLAREIFQLSQHETQNFPFCIMSVNITRIVIQALQEERLSRECNRRQQVIGVLNDLYAAAFLRLSCLWRQQHGTVTNASFFLKDLELSTKKKPRQLLKSLEAYLSCSLRPPSPPSSQIHFSSICDTGVELEGDSRLI
SIO_010081: ELMOD3
subclass of: SO_0000673
so part of: ELMOD3
location: join(276887..277129,277226..277295,277605..277667,277905..277996,278230..278353,278965..279087,279676..279806,280326..280402,280908..281035,281633..281796)
location: region:276887-281796:1
so has part: feature:276887-277129:1:exon
so has part: feature:277226-277295:1:exon
so has part: feature:277605-277667:1:exon
so has part: feature:277905-277996:1:exon
so has part: feature:278230-278353:1:exon
so has part: feature:278965-279087:1:exon
so has part: feature:279676-279806:1:exon
so has part: feature:280326-280402:1:exon
so has part: feature:280908-281035:1:exon
so has part: feature:281633-281796:1:exon

XP_016159068.1
type: Protein
SIO_000068: ncbiprotein

position:276887:1
position: 276887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281796:1
position: 281796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276887-277129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277226-277295:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277605-277667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277905-277996:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278230-278353:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278965-279087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279676-279806:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:280326-280402:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280908-281035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281633-281796:1:exon

ELMOD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ELMOD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELMO domain-containing protein 3 isoform X2
translation: MSGAAGSERPEERQRAVPPPQKIILGVQTPLKGPEPLSRGAQIPALGQEGVLQELLLGAGQSPDPGISEEQQQAREEWEALEEIQSGLGGTSGSSPPPISFTEALQHFQSAELSGSRGKVRAPRRRGILGALLHCLCGPPQLQPQLREEQELALAMAHCALDDSERVHMRILQTIYQQLTRSRLGCPRYGAHWEELGFQGADPGTDLRGTGMLGLMQILFFVLDSRLLPLAREIFQLSQHETQNFPFCIMSVNITRIVIQALQEERLSRECNRRQQVIGVLNDLYAAAFLRLSCLWRQQHGTVTNASFFLKDLELSTKKKPRQLLKSLEAYLSCSLRPPSPPSSQIHFSSICDTGVELEGDSRLI
SIO_010081: ELMOD3
subclass of: SO_0000673
so part of: ELMOD3
location: join(276887..276943,277061..277129,277226..277295,277605..277667,277905..277996,278230..278353,278965..279087,279676..279806,280326..280402,280908..281035,281633..281796)
location: region:276887-281796:1
so has part: feature:276887-276943:1:exon
so has part: feature:277061-277129:1:exon
so has part: feature:277226-277295:1:exon
so has part: feature:277605-277667:1:exon
so has part: feature:277905-277996:1:exon
so has part: feature:278230-278353:1:exon
so has part: feature:278965-279087:1:exon
so has part: feature:279676-279806:1:exon
so has part: feature:280326-280402:1:exon
so has part: feature:280908-281035:1:exon
so has part: feature:281633-281796:1:exon

XP_016159069.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276887-276943:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277061-277129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277226-277295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277605-277667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277905-277996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278230-278353:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:278965-279087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279676-279806:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:280326-280402:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:280908-281035:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:281633-281796:1:exon

GPAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GPAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 285534..293078
location: region:285534-293078:1
so has part: feature:285534-293078:1:exon
subclass of: SO_0000010

101808492
type: Gene
SIO_000068: ncbigene

position:285534:1
position: 285534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293078:1
position: 293078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285534-293078:1:exon

GPAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GPAT2
product: glycerol-3-phosphate acyltransferase 2, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016303574.1
SIO_010081: GPAT2
subclass of: SO_0000673
so part of: GPAT2
location: join(285534..285666,286300..286416,286487..286560,288097..288207,288369..288497,289135..289600,289687..289893,290094..290201,290410..290495,290581..290675,290775..290845,291096..291354,291784..291932,292027..292104,292186..292311,292391..292511,292613..292663,292735..292832,292910..293078)
location: region:285534-293078:1
so has part: feature:285534-285666:1:exon
so has part: feature:286300-286416:1:exon
so has part: feature:286487-286560:1:exon
so has part: feature:288097-288207:1:exon
so has part: feature:288369-288497:1:exon
so has part: feature:289135-289600:1:exon
so has part: feature:289687-289893:1:exon
so has part: feature:290094-290201:1:exon
so has part: feature:290410-290495:1:exon
so has part: feature:290581-290675:1:exon
so has part: feature:290775-290845:1:exon
so has part: feature:291096-291354:1:exon
so has part: feature:291784-291932:1:exon
so has part: feature:292027-292104:1:exon
so has part: feature:292186-292311:1:exon
so has part: feature:292391-292511:1:exon
so has part: feature:292613-292663:1:exon
so has part: feature:292735-292832:1:exon
so has part: feature:292910-293078:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285534-285666:1:exon

position:285666:1
position: 285666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286300-286416:1:exon

position:286300:1
position: 286300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286416:1
position: 286416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286487-286560:1:exon

position:286487:1
position: 286487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286560:1
position: 286560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:288097-288207:1:exon

position:288097:1
position: 288097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288207:1
position: 288207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:288369-288497:1:exon

position:288369:1
position: 288369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288497:1
position: 288497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:289135-289600:1:exon

position:289135:1
position: 289135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289600:1
position: 289600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:289687-289893:1:exon

position:289687:1
position: 289687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289893:1
position: 289893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:290094-290201:1:exon

position:290094:1
position: 290094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290201:1
position: 290201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:290410-290495:1:exon

position:290410:1
position: 290410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290495:1
position: 290495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:290581-290675:1:exon

position:290581:1
position: 290581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290675:1
position: 290675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:290775-290845:1:exon

position:290775:1
position: 290775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290845:1
position: 290845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:291096-291354:1:exon

position:291096:1
position: 291096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291354:1
position: 291354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:291784-291932:1:exon

position:291784:1
position: 291784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291932:1
position: 291932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:292027-292104:1:exon

position:292027:1
position: 292027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292104:1
position: 292104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:292186-292311:1:exon

position:292186:1
position: 292186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292311:1
position: 292311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:292391-292511:1:exon

position:292391:1
position: 292391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292511:1
position: 292511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:292613-292663:1:exon

position:292613:1
position: 292613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292663:1
position: 292663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:292735-292832:1:exon

position:292735:1
position: 292735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292832:1
position: 292832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:292910-293078:1:exon

position:292910:1
position: 292910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GPAT2
product: glycerol-3-phosphate acyltransferase 2, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005057926.2
SIO_010081: GPAT2
subclass of: SO_0000673
so part of: GPAT2
location: join(285535..285666,286300..286416,286487..286560,288097..288207,288369..288497,289135..289600,289687..289893,290094..290201,290410..290495,290581..290675,290775..290845,291096..291354,291784..291932,292027..292104,292186..292311,292391..292511,292613..292663,292777..292832,292910..293077)
location: region:285535-293077:1
so has part: feature:285535-285666:1:exon
so has part: feature:286300-286416:1:exon
so has part: feature:286487-286560:1:exon
so has part: feature:288097-288207:1:exon
so has part: feature:288369-288497:1:exon
so has part: feature:289135-289600:1:exon
so has part: feature:289687-289893:1:exon
so has part: feature:290094-290201:1:exon
so has part: feature:290410-290495:1:exon
so has part: feature:290581-290675:1:exon
so has part: feature:290775-290845:1:exon
so has part: feature:291096-291354:1:exon
so has part: feature:291784-291932:1:exon
so has part: feature:292027-292104:1:exon
so has part: feature:292186-292311:1:exon
so has part: feature:292391-292511:1:exon
so has part: feature:292613-292663:1:exon
so has part: feature:292777-292832:1:exon
so has part: feature:292910-293077:1:exon

position:285535:1
position: 285535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293077:1
position: 293077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285535-285666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286300-286416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286487-286560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288097-288207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288369-288497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289135-289600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289687-289893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290094-290201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290410-290495:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290581-290675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290775-290845:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:291096-291354:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:291784-291932:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:292027-292104:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:292186-292311:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:292391-292511:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:292613-292663:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:292777-292832:1:exon

position:292777:1
position: 292777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:292910-293077:1:exon

GPAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GPAT2
product: glycerol-3-phosphate acyltransferase 2, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005057927.2
SIO_010081: GPAT2
subclass of: SO_0000673
so part of: GPAT2
location: join(285535..285666,286300..286416,286487..286560,288097..288207,288369..288497,289135..289234,289306..289439,289516..289600,289687..289893,290094..290201,290410..290495,290581..290675,290775..290845,291096..291354,291784..291932,292027..292104,292186..292311,292391..292511,292613..292663,292735..292832,292910..293077)
location: region:285535-293077:1
so has part: feature:285535-285666:1:exon
so has part: feature:286300-286416:1:exon
so has part: feature:286487-286560:1:exon
so has part: feature:288097-288207:1:exon
so has part: feature:288369-288497:1:exon
so has part: feature:289135-289234:1:exon
so has part: feature:289306-289439:1:exon
so has part: feature:289516-289600:1:exon
so has part: feature:289687-289893:1:exon
so has part: feature:290094-290201:1:exon
so has part: feature:290410-290495:1:exon
so has part: feature:290581-290675:1:exon
so has part: feature:290775-290845:1:exon
so has part: feature:291096-291354:1:exon
so has part: feature:291784-291932:1:exon
so has part: feature:292027-292104:1:exon
so has part: feature:292186-292311:1:exon
so has part: feature:292391-292511:1:exon
so has part: feature:292613-292663:1:exon
so has part: feature:292735-292832:1:exon
so has part: feature:292910-293077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285535-285666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286300-286416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286487-286560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288097-288207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288369-288497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289135-289234:1:exon

position:289234:1
position: 289234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:289306-289439:1:exon

position:289306:1
position: 289306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289439:1
position: 289439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:289516-289600:1:exon

position:289516:1
position: 289516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:289687-289893:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290094-290201:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290410-290495:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:290581-290675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290775-290845:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:291096-291354:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:291784-291932:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:292027-292104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:292186-292311:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:292391-292511:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:292613-292663:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:292735-292832:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:292910-293077:1:exon

GPAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GPAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate acyltransferase 2, mitochondrial isoform X1
translation: MTPPKIQTWLSHSGPKLEVFIPFLGKYHRPVSGRCCQTCTPRSWDGFYPEDLAALGFRDVSRVTEADTRFRGWLVRRVCGFLAAWEWKIPAETPGELLVRICSSKRVQGAASGPDPGSEGDEGSRQRWKEKICQILGEIQAPLSPLLLRLCHWLLPKFLTRLFLSVQLHRGQLEMVLRAARTVRSPAGRCQPLQRWQFTPGPLACSPRCRWCSCAATSPRWMGCSCPSSSCPRGSGCPGWRWVPGPALASGKAACGMFPEDPGGCRGCPRCPSLARCLLQRLGGIFLPSGSELDEGLPGAVLDAYVQEVLRSRQPLVLFLEEPPTALWLAEPARRWLLRLLRALRDAAVPDVLLVPVGIAYDVAPGRMEQDGAPPQPLGIGTCLQAAFQALRRRRGCAQVDFSQPFSLREFVNNNLVRPVLTENRPEQLLLPTILGRRPLDVGNVGTLSPSLGTEEEILVTALGLHALSDSRACSAIMAVGITAALLLHRHREVVLLPQLMRDFSELLEQLLLRGCAVGFSGQLRALVGHSLRQLQPPLAPHLLGPPRAALGPPEALARARLGWLAGGVRHHLAGEAVGACAIRALLLEVLPILGHPSSLTRIVLSRDELLRKILELLQLLPPTLLGLQPCQPPDCHSLDILDKLILGGLLEEEEPENERWGCDVAPRRFLWGHSLGSFSDDSDNDSEHGVPKQCYKLSEPQGFPGFLLFLCRLLSPILQTYCRAVEFLEQPPWPQPEADYVEALLEFLAEDEDEVAFGGSLGISLHTGYPDRSLALSSLRSFKDMGVLEELQTPTGPLLLLSQPFQSASNREKLGAFIHQFTQL
SIO_010081: GPAT2
subclass of: SO_0000673
so part of: GPAT2
location: join(285652..285666,286300..286416,286487..286560,288097..288207,288369..288497,289135..289600,289687..289893,290094..290201,290410..290495,290581..290675,290775..290845,291096..291354,291784..291932,292027..292104,292186..292311,292391..292511,292613..292663,292735..292832,292910..293026)
location: region:285652-293026:1
so has part: feature:285652-285666:1:exon
so has part: feature:286300-286416:1:exon
so has part: feature:286487-286560:1:exon
so has part: feature:288097-288207:1:exon
so has part: feature:288369-288497:1:exon
so has part: feature:289135-289600:1:exon
so has part: feature:289687-289893:1:exon
so has part: feature:290094-290201:1:exon
so has part: feature:290410-290495:1:exon
so has part: feature:290581-290675:1:exon
so has part: feature:290775-290845:1:exon
so has part: feature:291096-291354:1:exon
so has part: feature:291784-291932:1:exon
so has part: feature:292027-292104:1:exon
so has part: feature:292186-292311:1:exon
so has part: feature:292391-292511:1:exon
so has part: feature:292613-292663:1:exon
so has part: feature:292735-292832:1:exon
so has part: feature:292910-293026:1:exon

XP_016159060.1
type: Protein
SIO_000068: ncbiprotein

position:285652:1
position: 285652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293026:1
position: 293026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285652-285666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286300-286416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286487-286560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288097-288207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288369-288497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289135-289600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289687-289893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290094-290201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290410-290495:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290581-290675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290775-290845:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:291096-291354:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:291784-291932:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:292027-292104:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:292186-292311:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:292391-292511:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:292613-292663:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:292735-292832:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:292910-293026:1:exon

GPAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GPAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate acyltransferase 2, mitochondrial isoform X2
translation: MTPPKIQTWLSHSGPKLEVFIPFLGKYHRPVSGRCCQTCTPRSWDGFYPEDLAALGFRDVSRVTEADTRFRGWLVRRVCGFLAAWEWKIPAETPGELLVRICSSKRVQGAASGPDPGSEGDEGSRQRWKEKICQILGEIQAPLSPLLLRLCHWLLPKFLTRLFLSVQLHRGQLEMVLRAARTVRSPAGRCQPLQRWQFTPGPLACSPRCRWCSCAATSPRWMGCSCPSSSCPRGSGCPGWRWVPGPALASGKAACGMFPEDPGGCRGCPRCPSLARCLLQRLGGIFLPSGSELDEGLPGAVLDAYVQEVLRSRQPLVLFLEEPPTALWLAEPARRWLLRLLRALRDAAVPDVLLVPVGIAYDVAPGRMEQDGAPPQPLGIGTCLQAAFQALRRRRGCAQVDFSQPFSLREFVNNNLVRPVLTENRPEQLLLPTILGRRPLDVGNVGTLSPSLGTEEEILVTALGLHALSDSRACSAIMAVGITAALLLHRHREVVLLPQLMRDFSELLEQLLLRGCAVGFSGQLRALVGHSLRQLQPPLAPHLLGPPRAALGPPEALARARLGWLAGGVRHHLAGEAVGACAIRALLLEVLPILGHPSSLTRIVLSRDELLRKILELLQLLPPTLLGLQPCQPPDCHSLDILDKLILGGLLEEEEPENERWGCDVAPRRFLWGHSLGSFSDDSDNDSEHGVPKQCYKLSEPQGFPGFLLFLCRLLSPILQTYCRAVEFLEQPPWPQPEADYVEALLEFLAEDEDGYPDRSLALSSLRSFKDMGVLEELQTPTGPLLLLSQPFQSASNREKLGAFIHQFTQL
SIO_010081: GPAT2
subclass of: SO_0000673
so part of: GPAT2
location: join(285652..285666,286300..286416,286487..286560,288097..288207,288369..288497,289135..289600,289687..289893,290094..290201,290410..290495,290581..290675,290775..290845,291096..291354,291784..291932,292027..292104,292186..292311,292391..292511,292613..292663,292777..292832,292910..293026)
location: region:285652-293026:1
so has part: feature:285652-285666:1:exon
so has part: feature:286300-286416:1:exon
so has part: feature:286487-286560:1:exon
so has part: feature:288097-288207:1:exon
so has part: feature:288369-288497:1:exon
so has part: feature:289135-289600:1:exon
so has part: feature:289687-289893:1:exon
so has part: feature:290094-290201:1:exon
so has part: feature:290410-290495:1:exon
so has part: feature:290581-290675:1:exon
so has part: feature:290775-290845:1:exon
so has part: feature:291096-291354:1:exon
so has part: feature:291784-291932:1:exon
so has part: feature:292027-292104:1:exon
so has part: feature:292186-292311:1:exon
so has part: feature:292391-292511:1:exon
so has part: feature:292613-292663:1:exon
so has part: feature:292777-292832:1:exon
so has part: feature:292910-293026:1:exon

XP_005057983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285652-285666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286300-286416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286487-286560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288097-288207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288369-288497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289135-289600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289687-289893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290094-290201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290410-290495:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290581-290675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290775-290845:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:291096-291354:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:291784-291932:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:292027-292104:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:292186-292311:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:292391-292511:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:292613-292663:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:292777-292832:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:292910-293026:1:exon

GPAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GPAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate acyltransferase 2, mitochondrial isoform X3
translation: MTPPKIQTWLSHSGPKLEVFIPFLGKYHRPVSGRCCQTCTPRSWDGFYPEDLAALGFRDVSRVTEADTRFRGWLVRRVCGFLAAWEWKIPAETPGELLVRICSSKRVQGAASGPDPGSEGDEGSRQRWKEKICQILGEIQAPLSPLLLRLCHWLLPKFLTRLFLSVQLHRGQLEMVLRAARTPEVPLVFLCSYQSQVDGLLLSFILLSQGIGLPRVAVGAWTSPRLRCLLQRLGGIFLPSGSELDEGLPGAVLDAYVQEVLRSRQPLVLFLEEPPTALWLAEPARRWLLRLLRALRDAAVPDVLLVPVGIAYDVAPGRMEQDGAPPQPLGIGTCLQAAFQALRRRRGCAQVDFSQPFSLREFVNNNLVRPVLTENRPEQLLLPTILGRRPLDVGNVGTLSPSLGTEEEILVTALGLHALSDSRACSAIMAVGITAALLLHRHREVVLLPQLMRDFSELLEQLLLRGCAVGFSGQLRALVGHSLRQLQPPLAPHLLGPPRAALGPPEALARARLGWLAGGVRHHLAGEAVGACAIRALLLEVLPILGHPSSLTRIVLSRDELLRKILELLQLLPPTLLGLQPCQPPDCHSLDILDKLILGGLLEEEEPENERWGCDVAPRRFLWGHSLGSFSDDSDNDSEHGVPKQCYKLSEPQGFPGFLLFLCRLLSPILQTYCRAVEFLEQPPWPQPEADYVEALLEFLAEDEDEVAFGGSLGISLHTGYPDRSLALSSLRSFKDMGVLEELQTPTGPLLLLSQPFQSASNREKLGAFIHQFTQL
SIO_010081: GPAT2
subclass of: SO_0000673
so part of: GPAT2
location: join(285652..285666,286300..286416,286487..286560,288097..288207,288369..288497,289135..289234,289306..289439,289516..289600,289687..289893,290094..290201,290410..290495,290581..290675,290775..290845,291096..291354,291784..291932,292027..292104,292186..292311,292391..292511,292613..292663,292735..292832,292910..293026)
location: region:285652-293026:1
so has part: feature:285652-285666:1:exon
so has part: feature:286300-286416:1:exon
so has part: feature:286487-286560:1:exon
so has part: feature:288097-288207:1:exon
so has part: feature:288369-288497:1:exon
so has part: feature:289135-289234:1:exon
so has part: feature:289306-289439:1:exon
so has part: feature:289516-289600:1:exon
so has part: feature:289687-289893:1:exon
so has part: feature:290094-290201:1:exon
so has part: feature:290410-290495:1:exon
so has part: feature:290581-290675:1:exon
so has part: feature:290775-290845:1:exon
so has part: feature:291096-291354:1:exon
so has part: feature:291784-291932:1:exon
so has part: feature:292027-292104:1:exon
so has part: feature:292186-292311:1:exon
so has part: feature:292391-292511:1:exon
so has part: feature:292613-292663:1:exon
so has part: feature:292735-292832:1:exon
so has part: feature:292910-293026:1:exon

XP_005057984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:285652-285666:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286300-286416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286487-286560:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288097-288207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:288369-288497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289135-289234:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289306-289439:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289516-289600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:289687-289893:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290094-290201:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290410-290495:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:290581-290675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:290775-290845:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:291096-291354:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:291784-291932:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:292027-292104:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:292186-292311:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:292391-292511:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:292613-292663:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:292735-292832:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:292910-293026:1:exon

GPAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GPAT2
product: glycerol-3-phosphate acyltransferase 2, mitochondrial, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016303575.1
SIO_010081: GPAT2
subclass of: SO_0000673
so part of: GPAT2
location: join(286327..287439,288097..288207,288369..288497,289135..289600,289687..289893,290094..290201,290410..290495,290581..290675,290775..290845,291096..291354,291784..291932,292027..292104,292186..292311,292391..292511,292613..292663,292735..292832,292910..293077)
location: region:286327-293077:1
so has part: feature:286327-287439:1:exon
so has part: feature:288097-288207:1:exon
so has part: feature:288369-288497:1:exon
so has part: feature:289135-289600:1:exon
so has part: feature:289687-289893:1:exon
so has part: feature:290094-290201:1:exon
so has part: feature:290410-290495:1:exon
so has part: feature:290581-290675:1:exon
so has part: feature:290775-290845:1:exon
so has part: feature:291096-291354:1:exon
so has part: feature:291784-291932:1:exon
so has part: feature:292027-292104:1:exon
so has part: feature:292186-292311:1:exon
so has part: feature:292391-292511:1:exon
so has part: feature:292613-292663:1:exon
so has part: feature:292735-292832:1:exon
so has part: feature:292910-293077:1:exon

position:286327:1
position: 286327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286327-287439:1:exon

position:287439:1
position: 287439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288097-288207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288369-288497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289135-289600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289687-289893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290094-290201:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:290410-290495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290581-290675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290775-290845:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291096-291354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291784-291932:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:292027-292104:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:292186-292311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:292391-292511:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:292613-292663:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:292735-292832:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:292910-293077:1:exon

GPAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GPAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate acyltransferase 2, mitochondrial isoform X4
translation: MSPSRFRGWLVRRVCGFLAAWEWKIPAETPGELLVRICSSKRVQGAASGPDPGSEGDEGSRQRWKEKICQILGEIQAPLSPLLLRLCHWLLPKFLTRLFLSVQLHRGQLEMVLRAARTVRSPAGRCQPLQRWQFTPGPLACSPRCRWCSCAATSPRWMGCSCPSSSCPRGSGCPGWRWVPGPALASGKAACGMFPEDPGGCRGCPRCPSLARCLLQRLGGIFLPSGSELDEGLPGAVLDAYVQEVLRSRQPLVLFLEEPPTALWLAEPARRWLLRLLRALRDAAVPDVLLVPVGIAYDVAPGRMEQDGAPPQPLGIGTCLQAAFQALRRRRGCAQVDFSQPFSLREFVNNNLVRPVLTENRPEQLLLPTILGRRPLDVGNVGTLSPSLGTEEEILVTALGLHALSDSRACSAIMAVGITAALLLHRHREVVLLPQLMRDFSELLEQLLLRGCAVGFSGQLRALVGHSLRQLQPPLAPHLLGPPRAALGPPEALARARLGWLAGGVRHHLAGEAVGACAIRALLLEVLPILGHPSSLTRIVLSRDELLRKILELLQLLPPTLLGLQPCQPPDCHSLDILDKLILGGLLEEEEPENERWGCDVAPRRFLWGHSLGSFSDDSDNDSEHGVPKQCYKLSEPQGFPGFLLFLCRLLSPILQTYCRAVEFLEQPPWPQPEADYVEALLEFLAEDEDEVAFGGSLGISLHTGYPDRSLALSSLRSFKDMGVLEELQTPTGPLLLLSQPFQSASNREKLGAFIHQFTQL
SIO_010081: GPAT2
subclass of: SO_0000673
so part of: GPAT2
location: join(287426..287439,288097..288207,288369..288497,289135..289600,289687..289893,290094..290201,290410..290495,290581..290675,290775..290845,291096..291354,291784..291932,292027..292104,292186..292311,292391..292511,292613..292663,292735..292832,292910..293026)
location: region:287426-293026:1
so has part: feature:287426-287439:1:exon
so has part: feature:288097-288207:1:exon
so has part: feature:288369-288497:1:exon
so has part: feature:289135-289600:1:exon
so has part: feature:289687-289893:1:exon
so has part: feature:290094-290201:1:exon
so has part: feature:290410-290495:1:exon
so has part: feature:290581-290675:1:exon
so has part: feature:290775-290845:1:exon
so has part: feature:291096-291354:1:exon
so has part: feature:291784-291932:1:exon
so has part: feature:292027-292104:1:exon
so has part: feature:292186-292311:1:exon
so has part: feature:292391-292511:1:exon
so has part: feature:292613-292663:1:exon
so has part: feature:292735-292832:1:exon
so has part: feature:292910-293026:1:exon

XP_016159061.1
type: Protein
SIO_000068: ncbiprotein

position:287426:1
position: 287426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287426-287439:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288097-288207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288369-288497:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289135-289600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289687-289893:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290094-290201:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:290410-290495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:290581-290675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290775-290845:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291096-291354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291784-291932:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:292027-292104:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:292186-292311:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:292391-292511:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:292613-292663:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:292735-292832:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:292910-293026:1:exon

LOC101808048
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101808048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(293055..295452)
location: region:293055-295452:-1
so has part: feature:293055-295452:-1:exon
subclass of: SO_0000010

101808048
type: Gene
SIO_000068: ncbigene

position:293055:-1
position: 293055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295452:-1
position: 295452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293055-295452:-1:exon

LOC101808048
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101808048
product: fumarylacetoacetate hydrolase domain-containing protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005057925.2
SIO_010081: LOC101808048
subclass of: SO_0000673
so part of: LOC101808048
location: complement(join(293055..293185,293265..293352,293422..293530,293723..293882,293953..294012,294085..294301,294662..294806,294845..295452))
location: region:293055-295452:-1
so has part: feature:294845-295452:-1:exon
so has part: feature:294662-294806:-1:exon
so has part: feature:294085-294301:-1:exon
so has part: feature:293953-294012:-1:exon
so has part: feature:293723-293882:-1:exon
so has part: feature:293422-293530:-1:exon
so has part: feature:293265-293352:-1:exon
so has part: feature:293055-293185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294845-295452:-1:exon

position:294845:-1
position: 294845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:294662-294806:-1:exon

position:294662:-1
position: 294662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294806:-1
position: 294806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:294085-294301:-1:exon

position:294085:-1
position: 294085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294301:-1
position: 294301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:293953-294012:-1:exon

position:293953:-1
position: 293953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294012:-1
position: 294012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:293723-293882:-1:exon

position:293723:-1
position: 293723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293882:-1
position: 293882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:293422-293530:-1:exon

position:293422:-1
position: 293422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293530:-1
position: 293530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:293265-293352:-1:exon

position:293265:-1
position: 293265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293352:-1
position: 293352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:293055-293185:-1:exon

position:293185:-1
position: 293185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101808048
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101808048
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fumarylacetoacetate hydrolase domain-containing protein 2
translation: MWGSLGSELCGIGTVRNSGLEEGEVGGGSHGTGAFLGLGLSGREMGGTPSGLGLCRIGGIARIGLSGMGVGVMSSGSKRCGVRRASTGTGGILGIAAVWDWGATLEPWGWVGYPGSGPGGIEGRDPAGAGVHPLPRAPCGGIPSSVPQGMRGVLRLVRFRGAAGGGPRLGLEEAPGGDLVDLSAAEPELPRSMREFLEIGPRGLALARRALESGQHRVPRATARLLAPVGDPEKVICVGLNYHDHCQEQAVKVPKEPIIFSKFPSAITGPFDDIVHPQDTSELDWEVELAAVIGKRGRHIEEAAALEHVLGFTVANDVSARDWQKRNGRQWLLSKTFDTFCPLGPAIVTREAVADVHNLWIRCSVNGHRMQDSNTSHLIFRVPALVAWVSRFVTLVPGDILLTGTPAGVGVFRKPPVFLKRGDEVQCEIEELGTICNRVV
SIO_010081: LOC101808048
subclass of: SO_0000673
so part of: LOC101808048
location: complement(join(293123..293185,293265..293352,293422..293530,293723..293882,293953..294012,294085..294301,294662..294806,294845..295325))
location: region:293123-295325:-1
so has part: feature:294845-295325:-1:exon
so has part: feature:294662-294806:-1:exon
so has part: feature:294085-294301:-1:exon
so has part: feature:293953-294012:-1:exon
so has part: feature:293723-293882:-1:exon
so has part: feature:293422-293530:-1:exon
so has part: feature:293265-293352:-1:exon
so has part: feature:293123-293185:-1:exon

XP_005057982.1
type: Protein
SIO_000068: ncbiprotein

position:293123:-1
position: 293123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295325:-1
position: 295325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294845-295325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:294662-294806:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:294085-294301:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293953-294012:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293723-293882:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293422-293530:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293265-293352:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293123-293185:-1:exon

KCNIP3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: KCNIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(295741..299208)
location: region:295741-299208:-1
so has part: feature:295741-299208:-1:exon
subclass of: SO_0000010

101806768
type: Gene
SIO_000068: ncbigene

position:295741:-1
position: 295741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299208:-1
position: 299208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295741-299208:-1:exon

KCNIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KCNIP3
product: potassium voltage-gated channel interacting protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303586.1
SIO_010081: KCNIP3
subclass of: SO_0000673
so part of: KCNIP3
location: complement(join(295741..296376,296800..296862,296944..297048,297127..297234,297509..297752,297839..297963,298977..299062))
location: region:295741-299062:-1
so has part: feature:298977-299062:-1:exon
so has part: feature:297839-297963:-1:exon
so has part: feature:297509-297752:-1:exon
so has part: feature:297127-297234:-1:exon
so has part: feature:296944-297048:-1:exon
so has part: feature:296800-296862:-1:exon
so has part: feature:295741-296376:-1:exon

position:299062:-1
position: 299062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298977-299062:-1:exon

position:298977:-1
position: 298977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297839-297963:-1:exon

position:297839:-1
position: 297839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297963:-1
position: 297963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297509-297752:-1:exon

position:297509:-1
position: 297509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297752:-1
position: 297752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:297127-297234:-1:exon

position:297127:-1
position: 297127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297234:-1
position: 297234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296944-297048:-1:exon

position:296944:-1
position: 296944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297048:-1
position: 297048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:296800-296862:-1:exon

position:296800:-1
position: 296800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296862:-1
position: 296862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:295741-296376:-1:exon

position:296376:-1
position: 296376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KCNIP3
product: potassium voltage-gated channel interacting protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005057919.1
SIO_010081: KCNIP3
subclass of: SO_0000673
so part of: KCNIP3
location: complement(join(295741..296376,296800..296862,296944..297048,297127..297234,297509..297579,297683..297752,297839..298155))
location: region:295741-298155:-1
so has part: feature:297839-298155:-1:exon
so has part: feature:297683-297752:-1:exon
so has part: feature:297509-297579:-1:exon
so has part: feature:297127-297234:-1:exon
so has part: feature:296944-297048:-1:exon
so has part: feature:296800-296862:-1:exon
so has part: feature:295741-296376:-1:exon

position:298155:-1
position: 298155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297839-298155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297683-297752:-1:exon

position:297683:-1
position: 297683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297509-297579:-1:exon

position:297579:-1
position: 297579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:297127-297234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296944-297048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296800-296862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:295741-296376:-1:exon

KCNIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KCNIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsenilin isoform X2
translation: MRAPPRRWAVGLGGRFRSVSEGVCARGSLLADSSDADVELPTIRHQPEGLEQLLARTKFTKTELQSLYRGFKNECPSGLVDEETFTLIYSRFFPQGDASSYAHFLFDAFDADRNGALCFQDFAVGLSVLLRGTEQQKLKWTFDLYDVNKDGYVTKEDMLEIMKSIYAMMGRCTEPALGASAPAQHVELFFQKMDRNRDGVVTFEEFLATCQETNKKLKGRINQACGSQRWDRTRTTLPPEPPGDGSATCQTDPFWEAVPPLDTDPPPLAVQGPDTAQAQPQGPQGGT
SIO_010081: KCNIP3
subclass of: SO_0000673
so part of: KCNIP3
location: complement(join(296149..296376,296800..296862,296944..297048,297127..297234,297509..297579,297683..297752,297839..298057))
location: region:296149-298057:-1
so has part: feature:297839-298057:-1:exon
so has part: feature:297683-297752:-1:exon
so has part: feature:297509-297579:-1:exon
so has part: feature:297127-297234:-1:exon
so has part: feature:296944-297048:-1:exon
so has part: feature:296800-296862:-1:exon
so has part: feature:296149-296376:-1:exon

XP_005057976.1
type: Protein
SIO_000068: ncbiprotein

position:296149:-1
position: 296149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298057:-1
position: 298057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297839-298057:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297683-297752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297509-297579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297127-297234:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296944-297048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296800-296862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296149-296376:-1:exon

KCNIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KCNIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsenilin isoform X1
translation: MPTWSSPPSGTSPRGWSSCWLGPSSPRRSFNPSTVASRMNVPAASWMRKPSRSSTRGSSLKAVSEGSPNPAGGSGGAHPGNSRPQFWGSHCPPSPADASSYAHFLFDAFDADRNGALCFQDFAVGLSVLLRGTEQQKLKWTFDLYDVNKDGYVTKEDMLEIMKSIYAMMGRCTEPALGASAPAQHVELFFQKMDRNRDGVVTFEEFLATCQETNKKLKGRINQACGSQRWDRTRTTLPPEPPGDGSATCQTDPFWEAVPPLDTDPPPLAVQGPDTAQAQPQGPQGGT
SIO_010081: KCNIP3
subclass of: SO_0000673
so part of: KCNIP3
location: complement(join(296149..296376,296800..296862,296944..297048,297127..297234,297509..297752,297839..297954))
location: region:296149-297954:-1
so has part: feature:297839-297954:-1:exon
so has part: feature:297509-297752:-1:exon
so has part: feature:297127-297234:-1:exon
so has part: feature:296944-297048:-1:exon
so has part: feature:296800-296862:-1:exon
so has part: feature:296149-296376:-1:exon

XP_016159072.1
type: Protein
SIO_000068: ncbiprotein

position:297954:-1
position: 297954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297839-297954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297509-297752:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297127-297234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296944-297048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296800-296862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296149-296376:-1:exon

KCNIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KCNIP3
product: potassium voltage-gated channel interacting protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005057922.2
SIO_010081: KCNIP3
subclass of: SO_0000673
so part of: KCNIP3
location: complement(join(296284..296462,296800..296862,296944..297048,297127..297234,297509..297579,297683..297752,297839..297963,299047..299208))
location: region:296284-299208:-1
so has part: feature:299047-299208:-1:exon
so has part: feature:297839-297963:-1:exon
so has part: feature:297683-297752:-1:exon
so has part: feature:297509-297579:-1:exon
so has part: feature:297127-297234:-1:exon
so has part: feature:296944-297048:-1:exon
so has part: feature:296800-296862:-1:exon
so has part: feature:296284-296462:-1:exon

position:296284:-1
position: 296284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299047-299208:-1:exon

position:299047:-1
position: 299047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297839-297963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297683-297752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297509-297579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297127-297234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296944-297048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296800-296862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296284-296462:-1:exon

position:296462:-1
position: 296462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KCNIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calsenilin isoform X3
translation: MGIQGMELCAVAVVILLFIAVLKQFGILGALRRDSSDADVELPTIRHQPEGLEQLLARTKFTKTELQSLYRGFKNECPSGLVDEETFTLIYSRFFPQGDASSYAHFLFDAFDADRNGALCFQDFAVGLSVLLRGTEQQKLKWTFDLYDVNKDGYVTKEDMLEIMKSIYAMMGRCTEPALGASAPAQHVELFFQKMDRNRDGVVTFEEFLATCQEDKDIMSSMQIFHNVL
SIO_010081: KCNIP3
subclass of: SO_0000673
so part of: KCNIP3
location: complement(join(296415..296462,296800..296862,296944..297048,297127..297234,297509..297579,297683..297752,297839..297963,299047..299146))
location: region:296415-299146:-1
so has part: feature:299047-299146:-1:exon
so has part: feature:297839-297963:-1:exon
so has part: feature:297683-297752:-1:exon
so has part: feature:297509-297579:-1:exon
so has part: feature:297127-297234:-1:exon
so has part: feature:296944-297048:-1:exon
so has part: feature:296800-296862:-1:exon
so has part: feature:296415-296462:-1:exon

XP_005057979.1
type: Protein
SIO_000068: ncbiprotein

position:296415:-1
position: 296415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299146:-1
position: 299146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299047-299146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297839-297963:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297683-297752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:297509-297579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297127-297234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296944-297048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296800-296862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296415-296462:-1:exon

LOC101806579
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101806579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 299145..302161
location: region:299145-302161:1
so has part: feature:299145-302161:1:exon
subclass of: SO_0000010

101806579
type: Gene
SIO_000068: ncbigene

position:299145:1
position: 299145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302161:1
position: 302161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299145-302161:1:exon

LOC101806579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101806579
product: cytochrome c oxidase subunit 5B, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005057913.2
SIO_010081: LOC101806579
subclass of: SO_0000673
so part of: LOC101806579
location: join(299145..299184,300934..301007,301616..301715,301955..302161)
location: region:299145-302161:1
so has part: feature:299145-299184:1:exon
so has part: feature:300934-301007:1:exon
so has part: feature:301616-301715:1:exon
so has part: feature:301955-302161:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299145-299184:1:exon

position:299184:1
position: 299184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:300934-301007:1:exon

position:300934:1
position: 300934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301007:1
position: 301007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301616-301715:1:exon

position:301616:1
position: 301616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301715:1
position: 301715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:301955-302161:1:exon

position:301955:1
position: 301955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101806579
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101806579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 5B, mitochondrial
translation: MAPGGGGGSPPKAWNLASDEEQATGLERKVMEAMNKGQDPYSMFRPKRYMGTKEDPNLVPSITNKRIVGCVCEEDNSYVVWFWLHKGEAQRCPSCGAHYKLIPHELPH
SIO_010081: LOC101806579
subclass of: SO_0000673
so part of: LOC101806579
location: join(299145..299184,300934..301007,301616..301715,301955..302067)
location: region:299145-302067:1
so has part: feature:299145-299184:1:exon
so has part: feature:300934-301007:1:exon
so has part: feature:301616-301715:1:exon
so has part: feature:301955-302067:1:exon

XP_005057970.2
type: Protein
SIO_000068: ncbiprotein

position:302067:1
position: 302067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299145-299184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:300934-301007:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301616-301715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:301955-302067:1:exon

LOC101808819
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101808819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 313426..318282
location: region:313426-318282:1
so has part: feature:313426-318282:1:exon
subclass of: SO_0000010

101808819
type: Gene
SIO_000068: ncbigene

position:313426:1
position: 313426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318282:1
position: 318282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313426-318282:1:exon

LOC101808819
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101808819
product: histone H2A.V
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005057928.2
SIO_010081: LOC101808819
subclass of: SO_0000673
so part of: LOC101808819
location: join(313426..313551,313714..313809,316847..316924,317421..317534,317603..317732,317968..318282)
location: region:313426-318282:1
so has part: feature:313426-313551:1:exon
so has part: feature:313714-313809:1:exon
so has part: feature:316847-316924:1:exon
so has part: feature:317421-317534:1:exon
so has part: feature:317603-317732:1:exon
so has part: feature:317968-318282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313426-313551:1:exon

position:313551:1
position: 313551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313714-313809:1:exon

position:313714:1
position: 313714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313809:1
position: 313809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316847-316924:1:exon

position:316847:1
position: 316847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316924:1
position: 316924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:317421-317534:1:exon

position:317421:1
position: 317421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317534:1
position: 317534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:317603-317732:1:exon

position:317603:1
position: 317603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317732:1
position: 317732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:317968-318282:1:exon

position:317968:1
position: 317968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101808819
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101808819
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A.V
translation: MDGERSGSPIGRRGMFKLVWEAVIGGDAARPAAPARAGHCLAAPEAGRARRWLWGSDGGSGIMAGGKAGKDSGKAKAKAVSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDSLIKATIAGGGVIPHIHKSLIGKKGQQKTA
SIO_010081: LOC101808819
subclass of: SO_0000673
so part of: LOC101808819
location: join(313459..313551,313714..313809,316847..316924,317421..317534,317603..317732,317968..318029)
location: region:313459-318029:1
so has part: feature:313459-313551:1:exon
so has part: feature:313714-313809:1:exon
so has part: feature:316847-316924:1:exon
so has part: feature:317421-317534:1:exon
so has part: feature:317603-317732:1:exon
so has part: feature:317968-318029:1:exon

XP_005057985.1
type: Protein
SIO_000068: ncbiprotein

position:313459:1
position: 313459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318029:1
position: 318029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313459-313551:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313714-313809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316847-316924:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:317421-317534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:317603-317732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:317968-318029:1:exon

MAT2A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MAT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 319658..326144
location: region:319658-326144:1
so has part: feature:319658-326144:1:exon
subclass of: SO_0000010

101809012
type: Gene
SIO_000068: ncbigene

position:319658:1
position: 319658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326144:1
position: 326144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319658-326144:1:exon

MAT2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MAT2A
product: methionine adenosyltransferase 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005057930.1
SIO_010081: MAT2A
subclass of: SO_0000673
so part of: MAT2A
location: join(319658..319841,320898..320975,321053..321175,321275..321387,322690..322833,322913..323131,323471..323653,323758..323891,325931..326144)
location: region:319658-326144:1
so has part: feature:319658-319841:1:exon
so has part: feature:320898-320975:1:exon
so has part: feature:321053-321175:1:exon
so has part: feature:321275-321387:1:exon
so has part: feature:322690-322833:1:exon
so has part: feature:322913-323131:1:exon
so has part: feature:323471-323653:1:exon
so has part: feature:323758-323891:1:exon
so has part: feature:325931-326144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319658-319841:1:exon

position:319841:1
position: 319841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320898-320975:1:exon

position:320898:1
position: 320898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320975:1
position: 320975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321053-321175:1:exon

position:321053:1
position: 321053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321175:1
position: 321175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321275-321387:1:exon

position:321275:1
position: 321275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321387:1
position: 321387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:322690-322833:1:exon

position:322690:1
position: 322690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322833:1
position: 322833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:322913-323131:1:exon

position:322913:1
position: 322913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323131:1
position: 323131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:323471-323653:1:exon

position:323471:1
position: 323471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323653:1
position: 323653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:323758-323891:1:exon

position:323758:1
position: 323758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323891:1
position: 323891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:325931-326144:1:exon

position:325931:1
position: 325931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAT2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MAT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosylmethionine synthase isoform X1
translation: MNGQLNGFHEVFIEEGTFLFTSESVGEGHPDKICDQISDAVLDAHLKQDPDAKVACETVAKTGMILLAGEITSRANVDYQKVVRDTIRHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRSEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRSGALPWLRPDSKTQVTVQYMQDRGAVIPIRVHTIVISVQHDEDVCLDEMRDALKEKVIKAVVPPKYLDDDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPLYQRTAAYGHFGRDSFPWEVPKKLKY
SIO_010081: MAT2A
subclass of: SO_0000673
so part of: MAT2A
location: join(319751..319841,320898..320975,321053..321175,321275..321387,322690..322833,322913..323131,323471..323653,323758..323891,325931..326033)
location: region:319751-326033:1
so has part: feature:319751-319841:1:exon
so has part: feature:320898-320975:1:exon
so has part: feature:321053-321175:1:exon
so has part: feature:321275-321387:1:exon
so has part: feature:322690-322833:1:exon
so has part: feature:322913-323131:1:exon
so has part: feature:323471-323653:1:exon
so has part: feature:323758-323891:1:exon
so has part: feature:325931-326033:1:exon

XP_005057987.1
type: Protein
SIO_000068: ncbiprotein

position:319751:1
position: 319751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326033:1
position: 326033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319751-319841:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320898-320975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321053-321175:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321275-321387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322690-322833:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:322913-323131:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323471-323653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323758-323891:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:325931-326033:1:exon

MAT2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MAT2A
product: methionine adenosyltransferase 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303584.1
SIO_010081: MAT2A
subclass of: SO_0000673
so part of: MAT2A
location: join(321417..322203,322281..322403,322503..322615,322690..322833,322913..323131,323471..323653,323758..323891,325931..326144)
location: region:321417-326144:1
so has part: feature:321417-322203:1:exon
so has part: feature:322281-322403:1:exon
so has part: feature:322503-322615:1:exon
so has part: feature:322690-322833:1:exon
so has part: feature:322913-323131:1:exon
so has part: feature:323471-323653:1:exon
so has part: feature:323758-323891:1:exon
so has part: feature:325931-326144:1:exon

position:321417:1
position: 321417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321417-322203:1:exon

position:322203:1
position: 322203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322281-322403:1:exon

position:322281:1
position: 322281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322403:1
position: 322403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322503-322615:1:exon

position:322503:1
position: 322503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322615:1
position: 322615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:322690-322833:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322913-323131:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323471-323653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323758-323891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:325931-326144:1:exon

MAT2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MAT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S-adenosylmethionine synthase isoform X2
translation: MSPDKICDQISDAVLDAHLKQDPDAKVACETVAKTGMILLAGEITSRANVDYQKVVRDTIRHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGVHLDRSEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRSGALPWLRPDSKTQVTVQYMQDRGAVIPIRVHTIVISVQHDEDVCLDEMRDALKEKVIKAVVPPKYLDDDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKKPLYQRTAAYGHFGRDSFPWEVPKKLKY
SIO_010081: MAT2A
subclass of: SO_0000673
so part of: MAT2A
location: join(322116..322203,322281..322403,322503..322615,322690..322833,322913..323131,323471..323653,323758..323891,325931..326033)
location: region:322116-326033:1
so has part: feature:322116-322203:1:exon
so has part: feature:322281-322403:1:exon
so has part: feature:322503-322615:1:exon
so has part: feature:322690-322833:1:exon
so has part: feature:322913-323131:1:exon
so has part: feature:323471-323653:1:exon
so has part: feature:323758-323891:1:exon
so has part: feature:325931-326033:1:exon

XP_016159070.1
type: Protein
SIO_000068: ncbiprotein

position:322116:1
position: 322116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322116-322203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322281-322403:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322503-322615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322690-322833:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322913-323131:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:323471-323653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:323758-323891:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:325931-326033:1:exon

GGCX
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GGCX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(328212..336012)
location: region:328212-336012:-1
so has part: feature:328212-336012:-1:exon
subclass of: SO_0000010

101818545
type: Gene
SIO_000068: ncbigene

position:328212:-1
position: 328212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336012:-1
position: 336012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328212-336012:-1:exon

GGCX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GGCX
product: gamma-glutamyl carboxylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303537.1
SIO_010081: GGCX
subclass of: SO_0000673
so part of: GGCX
location: complement(join(328212..328396,328464..328653,329081..329228,329297..329427,329706..329875,330068..330219,330568..330699,330933..331192,331468..331633,332298..332402,332465..332543,333058..333223,333430..333588,334223..334415,335477..335640,335985..336012))
location: region:328212-336012:-1
so has part: feature:335985-336012:-1:exon
so has part: feature:335477-335640:-1:exon
so has part: feature:334223-334415:-1:exon
so has part: feature:333430-333588:-1:exon
so has part: feature:333058-333223:-1:exon
so has part: feature:332465-332543:-1:exon
so has part: feature:332298-332402:-1:exon
so has part: feature:331468-331633:-1:exon
so has part: feature:330933-331192:-1:exon
so has part: feature:330568-330699:-1:exon
so has part: feature:330068-330219:-1:exon
so has part: feature:329706-329875:-1:exon
so has part: feature:329297-329427:-1:exon
so has part: feature:329081-329228:-1:exon
so has part: feature:328464-328653:-1:exon
so has part: feature:328212-328396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:335985-336012:-1:exon

position:335985:-1
position: 335985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:335477-335640:-1:exon

position:335477:-1
position: 335477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335640:-1
position: 335640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:334223-334415:-1:exon

position:334223:-1
position: 334223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:334415:-1
position: 334415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333430-333588:-1:exon

position:333430:-1
position: 333430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333588:-1
position: 333588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333058-333223:-1:exon

position:333058:-1
position: 333058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333223:-1
position: 333223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:332465-332543:-1:exon

position:332465:-1
position: 332465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332543:-1
position: 332543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:332298-332402:-1:exon

position:332298:-1
position: 332298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332402:-1
position: 332402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:331468-331633:-1:exon

position:331468:-1
position: 331468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331633:-1
position: 331633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:330933-331192:-1:exon

position:330933:-1
position: 330933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331192:-1
position: 331192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:330568-330699:-1:exon

position:330568:-1
position: 330568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330699:-1
position: 330699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:330068-330219:-1:exon

position:330068:-1
position: 330068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330219:-1
position: 330219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:329706-329875:-1:exon

position:329706:-1
position: 329706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329875:-1
position: 329875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:329297-329427:-1:exon

position:329297:-1
position: 329297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329427:-1
position: 329427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:329081-329228:-1:exon

position:329081:-1
position: 329081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329228:-1
position: 329228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:328464-328653:-1:exon

position:328464:-1
position: 328464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328653:-1
position: 328653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:328212-328396:-1:exon

position:328396:-1
position: 328396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GGCX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GGCX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin K-dependent gamma-carboxylase
translation: MPPSNLQEQCTRLAPPSLPYTPQRNPVSTLWAPHGTLWAAQTLTRALEPPKGPPKHPRGTPHPHPQRGEAAGSPPSPTASPKSSSTSPGLARRLLGFELRDLTRWHRFVRLLHRPQDPAALGAFRAAFGLLMALDVPQERGLGHLDQRYLDGLEVCRFPLLPFLQPLPLDWMYLLYTIMFLGALGIMLGCCYRLSCVAFLCPYWYLFLLDKTSWNNHSYLYGLLGFQLALLGADRYGSVDGLFRPRKRNAHVPLWNYALLRAQVFIVYFIAGLKKLDADWVGGFSMGTLARHWLFAPSRLVLSEELPSRLVVHGGGLVLDLSAGFLLFFDATRPLALVFVTYFHCMNSQLFSIGMFSYTMLATNGLFCRPEWPRGLLARCPLWLQGWLPSTKPPQPSPDCHYGGRGARGGLRPRQHLAAAFTILYVLEQLFLPYSHFITQGYNNWTNGLYGYSWDMMVHSRFHQHVKITYRDGLTGEVGYLKPGAFTQSRRWRDHADMLKQYSACLSRLLPRYNVSQPQIYFDVWVSINERFQQRLVDPRVDLVRAPWSPWTPTPWLLPLLVDLSPWRQRLQELEAHLDGHTDTVFIADFPGLHLENFVSEDLGNTSLRVLQGKVLVELVEQQQNFSLQEGEGMQLPAGQYHKVHTVSPEPSCYMYLYVNTTALELERNLTRLRELRERVRNGTEQSPLPPELRPLLGEPLPTGVPLDPVVSLFLRREQREQRRERESGLAQRLQRFLRRKFFLFRRSALMTLIALRNLALGRPSPERLAREVAFASWRGEEEARPETDGGAQRGPEL
SIO_010081: GGCX
subclass of: SO_0000673
so part of: GGCX
location: complement(join(328243..328396,328464..328653,329081..329228,329297..329427,329706..329875,330068..330219,330568..330699,330933..331192,331468..331633,332298..332402,332465..332543,333058..333223,333430..333588,334223..334415,335477..335640,335985..336012))
location: region:328243-336012:-1
so has part: feature:335985-336012:-1:exon
so has part: feature:335477-335640:-1:exon
so has part: feature:334223-334415:-1:exon
so has part: feature:333430-333588:-1:exon
so has part: feature:333058-333223:-1:exon
so has part: feature:332465-332543:-1:exon
so has part: feature:332298-332402:-1:exon
so has part: feature:331468-331633:-1:exon
so has part: feature:330933-331192:-1:exon
so has part: feature:330568-330699:-1:exon
so has part: feature:330068-330219:-1:exon
so has part: feature:329706-329875:-1:exon
so has part: feature:329297-329427:-1:exon
so has part: feature:329081-329228:-1:exon
so has part: feature:328464-328653:-1:exon
so has part: feature:328243-328396:-1:exon

XP_016159023.1
type: Protein
SIO_000068: ncbiprotein

position:328243:-1
position: 328243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:335985-336012:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:335477-335640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:334223-334415:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333430-333588:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333058-333223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332465-332543:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332298-332402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331468-331633:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330933-331192:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:330568-330699:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:330068-330219:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:329706-329875:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:329297-329427:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:329081-329228:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:328464-328653:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:328243-328396:-1:exon

VAMP8
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: VAMP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 336015..337905
location: region:336015-337905:1
so has part: feature:336015-337905:1:exon
subclass of: SO_0000010

101818740
type: Gene
SIO_000068: ncbigene

position:336015:1
position: 336015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337905:1
position: 337905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336015-337905:1:exon

VAMP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: VAMP8
product: vesicle associated membrane protein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005057980.1
SIO_010081: VAMP8
subclass of: SO_0000673
so part of: VAMP8
location: join(336015..336047,336442..336711,337705..337905)
location: region:336015-337905:1
so has part: feature:336015-336047:1:exon
so has part: feature:336442-336711:1:exon
so has part: feature:337705-337905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336015-336047:1:exon

position:336047:1
position: 336047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336442-336711:1:exon

position:336442:1
position: 336442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336711:1
position: 336711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337705-337905:1:exon

position:337705:1
position: 337705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VAMP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: VAMP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein 8
translation: MPGAAQRVLEVGAVECCGGVQDTCGVLEVLPDPCPVLQAGVPGGNPADVATEATTGEGRVQALQREVQGVTSIMTQNVERILARGENLEQLHSKSQDLEATSEHFRTTSQKMARRYWWKNVKLLIILGLVGVIVVVLIILLATGTIPT
SIO_010081: VAMP8
subclass of: SO_0000673
so part of: VAMP8
location: join(336015..336047,336442..336711,337705..337848)
location: region:336015-337848:1
so has part: feature:336015-336047:1:exon
so has part: feature:336442-336711:1:exon
so has part: feature:337705-337848:1:exon

XP_005058037.1
type: Protein
SIO_000068: ncbiprotein

position:337848:1
position: 337848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336015-336047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:336442-336711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337705-337848:1:exon

LOC101809563
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101809563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 340367..342778
location: region:340367-342778:1
so has part: feature:340367-342778:1:exon
subclass of: SO_0000010

101809563
type: Gene
SIO_000068: ncbigene

position:340367:1
position: 340367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342778:1
position: 342778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340367-342778:1:exon

LOC101809563
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101809563
product: uncharacterized LOC101809563
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005057932.2
SIO_010081: LOC101809563
subclass of: SO_0000673
so part of: LOC101809563
location: join(340367..340989,341618..342778)
location: region:340367-342778:1
so has part: feature:340367-340989:1:exon
so has part: feature:341618-342778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340367-340989:1:exon

position:340989:1
position: 340989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341618-342778:1:exon

position:341618:1
position: 341618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101809563
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101809563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101809563
translation: MVRLCPQGGSFLMVPRVSIRPHDAHVPWSPQGPSPWFLSPHVPPVPLPHGAHCLRCPCLSPVASPCSHGPDIPMSLCPLSPPSPQRAYPQCSHSIRPCPHIVSPRPQAGLARCQREAEEVAELMRQNVARALEREGHLEQLQSRAQDLRKAGEAFTRTTQTVTRRQRRRHRRWHLVALGLGLLFLFILGLALALALARSSPGTVTSTVPTPQGGTKPPPSTAGTP
SIO_010081: LOC101809563
subclass of: SO_0000673
so part of: LOC101809563
location: join(340537..340989,341618..341842)
location: region:340537-341842:1
so has part: feature:340537-340989:1:exon
so has part: feature:341618-341842:1:exon

XP_005057989.1
type: Protein
SIO_000068: ncbiprotein

position:340537:1
position: 340537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341842:1
position: 341842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340537-340989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341618-341842:1:exon

USP39
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: USP39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 343551..351486
location: region:343551-351486:1
so has part: feature:343551-351486:1:exon
subclass of: SO_0000010

101818933
type: Gene
SIO_000068: ncbigene

position:343551:1
position: 343551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351486:1
position: 351486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343551-351486:1:exon

USP39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: USP39
product: ubiquitin specific peptidase 39
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005057981.1
SIO_010081: USP39
subclass of: SO_0000673
so part of: USP39
location: join(343551..343791,346351..346780,346851..346945,347241..347377,347764..347916,348472..348697,348948..349025,349124..349191,349748..350079,350716..350851,350934..351020,351171..351486)
location: region:343551-351486:1
so has part: feature:343551-343791:1:exon
so has part: feature:346351-346780:1:exon
so has part: feature:346851-346945:1:exon
so has part: feature:347241-347377:1:exon
so has part: feature:347764-347916:1:exon
so has part: feature:348472-348697:1:exon
so has part: feature:348948-349025:1:exon
so has part: feature:349124-349191:1:exon
so has part: feature:349748-350079:1:exon
so has part: feature:350716-350851:1:exon
so has part: feature:350934-351020:1:exon
so has part: feature:351171-351486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343551-343791:1:exon

position:343791:1
position: 343791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:346351-346780:1:exon

position:346351:1
position: 346351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346780:1
position: 346780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:346851-346945:1:exon

position:346851:1
position: 346851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346945:1
position: 346945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:347241-347377:1:exon

position:347241:1
position: 347241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347377:1
position: 347377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:347764-347916:1:exon

position:347764:1
position: 347764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347916:1
position: 347916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:348472-348697:1:exon

position:348472:1
position: 348472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348697:1
position: 348697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:348948-349025:1:exon

position:348948:1
position: 348948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349025:1
position: 349025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:349124-349191:1:exon

position:349124:1
position: 349124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349191:1
position: 349191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:349748-350079:1:exon

position:349748:1
position: 349748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350079:1
position: 350079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:350716-350851:1:exon

position:350716:1
position: 350716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350851:1
position: 350851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:350934-351020:1:exon

position:350934:1
position: 350934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351020:1
position: 351020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:351171-351486:1:exon

position:351171:1
position: 351171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: USP39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6.U5 tri-snRNP-associated protein 2
translation: MAAPVPHGTHRPTEPLPTALHGAPALWYPPGPTALPPVPWDPHPQHPNAAGTCGTPMPWQHPLAHGTPSDRHPPQPHTQGTGNWRGECRGVRVGTRQGGGQHWGTRGCEGTLGCGGTLGTLGRGGRSQGCPGGHQGEEGQDSLEERDGEWSVLGVLSSALGGICSQRGSLAPGRCSGRRGRHPRAFGVLVPPLLTPSCPPVRYGRFDPEDQRSRHCPYLDTINKSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQLSHHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTAQHIAHLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEENYRHIQRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVEFLSWFLNALHAALGGTKRKKKTIVTDVFQGSMRIFTKKLPHPDLPAEEKAQLLQNSEYQERMVESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFSILAKFNGSTEKEYKTYKENFLKRFQLTRLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLSEEVQAAHAHTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRREEDETKQQGA
SIO_010081: USP39
subclass of: SO_0000673
so part of: USP39
location: join(343551..343791,346351..346780,346851..346945,347241..347377,347764..347916,348472..348697,348948..349025,349124..349191,349748..350079,350716..350851,350934..351020,351171..351218)
location: region:343551-351218:1
so has part: feature:343551-343791:1:exon
so has part: feature:346351-346780:1:exon
so has part: feature:346851-346945:1:exon
so has part: feature:347241-347377:1:exon
so has part: feature:347764-347916:1:exon
so has part: feature:348472-348697:1:exon
so has part: feature:348948-349025:1:exon
so has part: feature:349124-349191:1:exon
so has part: feature:349748-350079:1:exon
so has part: feature:350716-350851:1:exon
so has part: feature:350934-351020:1:exon
so has part: feature:351171-351218:1:exon

XP_005058038.1
type: Protein
SIO_000068: ncbiprotein

position:351218:1
position: 351218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343551-343791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:346351-346780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:346851-346945:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347241-347377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347764-347916:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:348472-348697:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:348948-349025:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349124-349191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:349748-350079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:350716-350851:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:350934-351020:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:351171-351218:1:exon

LOC101809762
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101809762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(351707..355871)
location: region:351707-355871:-1
so has part: feature:351707-355871:-1:exon
subclass of: SO_0000010

101809762
type: Gene
SIO_000068: ncbigene

position:351707:-1
position: 351707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355871:-1
position: 355871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351707-355871:-1:exon

LOC101809762
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101809762
product: proactivator polypeptide-like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 55% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005057933.2
SIO_010081: LOC101809762
subclass of: SO_0000673
so part of: LOC101809762
location: complement(join(351707..351742,351814..351918,352452..352604,353178..353336,353925..353993,354304..354413,354978..355097,355856..355871))
location: region:351707-355871:-1
so has part: feature:355856-355871:-1:exon
so has part: feature:354978-355097:-1:exon
so has part: feature:354304-354413:-1:exon
so has part: feature:353925-353993:-1:exon
so has part: feature:353178-353336:-1:exon
so has part: feature:352452-352604:-1:exon
so has part: feature:351814-351918:-1:exon
so has part: feature:351707-351742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355856-355871:-1:exon

position:355856:-1
position: 355856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354978-355097:-1:exon

position:354978:-1
position: 354978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355097:-1
position: 355097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354304-354413:-1:exon

position:354304:-1
position: 354304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354413:-1
position: 354413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:353925-353993:-1:exon

position:353925:-1
position: 353925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353993:-1
position: 353993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:353178-353336:-1:exon

position:353178:-1
position: 353178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353336:-1
position: 353336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:352452-352604:-1:exon

position:352452:-1
position: 352452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:352604:-1
position: 352604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:351814-351918:-1:exon

position:351814:-1
position: 351814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351918:-1
position: 351918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:351707-351742:-1:exon

position:351742:-1
position: 351742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101809762
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101809762
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proactivator polypeptide-like 1
translation: MALALPLLLALLGASPGGGCGVPPSAWCQDWVTALRCGALGRCPHLAQGHPDMDVCAMCQQLFGFLHQASNHSATEKPWQVCATLKLCRGEPGAAPAAPILEAPGAHLQVRGHAGGWRWPRGHRHGPHGCLAQRYAALALEGLLGRLGPRLLCRLLLACRSEDTEALATLPPPWVLEAVVDPKGVGVPALSLPLGPCALGPTFWCSGPEAARRCQALQHCQEHIWL
SIO_010081: LOC101809762
subclass of: SO_0000673
so part of: LOC101809762
location: complement(join(351707..351742,351814..351918,352452..352604,353178..353336,353925..353993,354304..354413,354978..355026))
location: region:351707-355026:-1
so has part: feature:354978-355026:-1:exon
so has part: feature:354304-354413:-1:exon
so has part: feature:353925-353993:-1:exon
so has part: feature:353178-353336:-1:exon
so has part: feature:352452-352604:-1:exon
so has part: feature:351814-351918:-1:exon
so has part: feature:351707-351742:-1:exon

XP_005057990.2
type: Protein
SIO_000068: ncbiprotein

position:355026:-1
position: 355026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354978-355026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354304-354413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:353925-353993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353178-353336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352452-352604:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:351814-351918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:351707-351742:-1:exon

MXD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(357961..363569)
location: region:357961-363569:-1
so has part: feature:357961-363569:-1:exon
subclass of: SO_0000010

101819116
type: Gene
SIO_000068: ncbigene

position:357961:-1
position: 357961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363569:-1
position: 363569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357961-363569:-1:exon

MXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MXD1
product: MAX dimerization protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016303588.1
SIO_010081: MXD1
subclass of: SO_0000673
so part of: MXD1
location: complement(join(357961..359658,360857..360971,362027..363569))
location: region:357961-363569:-1
so has part: feature:362027-363569:-1:exon
so has part: feature:360857-360971:-1:exon
so has part: feature:357961-359658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362027-363569:-1:exon

position:362027:-1
position: 362027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360857-360971:-1:exon

position:360857:-1
position: 360857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360971:-1
position: 360971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:357961-359658:-1:exon

position:359658:-1
position: 359658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MXD1
product: MAX dimerization protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016303589.1
SIO_010081: MXD1
subclass of: SO_0000673
so part of: MXD1
location: complement(join(357961..359420,359499..359658,360857..360971,362027..363563))
location: region:357961-363563:-1
so has part: feature:362027-363563:-1:exon
so has part: feature:360857-360971:-1:exon
so has part: feature:359499-359658:-1:exon
so has part: feature:357961-359420:-1:exon

position:363563:-1
position: 363563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362027-363563:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360857-360971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359499-359658:-1:exon

position:359499:-1
position: 359499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:357961-359420:-1:exon

position:359420:-1
position: 359420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: max dimerization protein 1 isoform X2
translation: MEKNRRAQLRLCLERLKGLVPLGASAGRHTTLSLLTRARLHIQKLEDQERRALHQIEQLQREQRHLQRQLEKLGMERVRIDSIGSSLSSERSDSDQEEMDVDVESTDDLPADLDWSSSSPSDSDERGSLQSLGSDEGYSSSGGTRAKLASSRKLPAGI
SIO_010081: MXD1
subclass of: SO_0000673
so part of: MXD1
location: complement(join(359233..359420,359499..359658,360857..360971,362027..362040))
location: region:359233-362040:-1
so has part: feature:362027-362040:-1:exon
so has part: feature:360857-360971:-1:exon
so has part: feature:359499-359658:-1:exon
so has part: feature:359233-359420:-1:exon

XP_016159075.1
type: Protein
SIO_000068: ncbiprotein

position:359233:-1
position: 359233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362040:-1
position: 362040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362027-362040:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360857-360971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359499-359658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:359233-359420:-1:exon

MXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MXD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: max dimerization protein 1 isoform X1
translation: MEKNRRAQLRLCLERLKGLVPLGASAGRHTTLSLLTRARLHIQKLEDQERRALHQIEQLQREQRHLQRQLEKLGMERVRIDSIGSSLSSERSDSDQGESPRWGTAGERPGRAGAPTIPIPPAEEMDVDVESTDDLPADLDWSSSSPSDSDERGSLQSLGSDEGYSSSGGTRAKLASSRKLPAGI
SIO_010081: MXD1
subclass of: SO_0000673
so part of: MXD1
location: complement(join(359233..359658,360857..360971,362027..362040))
location: region:359233-362040:-1
so has part: feature:362027-362040:-1:exon
so has part: feature:360857-360971:-1:exon
so has part: feature:359233-359658:-1:exon

XP_016159074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:362027-362040:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:360857-360971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359233-359658:-1:exon

SNRNP27
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SNRNP27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(366551..369864)
location: region:366551-369864:-1
so has part: feature:366551-369864:-1:exon
subclass of: SO_0000010

101819317
type: Gene
SIO_000068: ncbigene

position:366551:-1
position: 366551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369864:-1
position: 369864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366551-369864:-1:exon

SNRNP27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SNRNP27
product: small nuclear ribonucleoprotein U4/U6.U5 subunit 27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303538.1
SIO_010081: SNRNP27
subclass of: SO_0000673
so part of: SNRNP27
location: complement(join(366551..366855,367368..367432,367526..367605,367734..367843,368055..368096,368163..368404,369670..369864))
location: region:366551-369864:-1
so has part: feature:369670-369864:-1:exon
so has part: feature:368163-368404:-1:exon
so has part: feature:368055-368096:-1:exon
so has part: feature:367734-367843:-1:exon
so has part: feature:367526-367605:-1:exon
so has part: feature:367368-367432:-1:exon
so has part: feature:366551-366855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369670-369864:-1:exon

position:369670:-1
position: 369670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368163-368404:-1:exon

position:368163:-1
position: 368163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368404:-1
position: 368404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368055-368096:-1:exon

position:368055:-1
position: 368055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368096:-1
position: 368096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:367734-367843:-1:exon

position:367734:-1
position: 367734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367843:-1
position: 367843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:367526-367605:-1:exon

position:367526:-1
position: 367526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367605:-1
position: 367605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:367368-367432:-1:exon

position:367368:-1
position: 367368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367432:-1
position: 367432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:366551-366855:-1:exon

position:366855:-1
position: 366855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNRNP27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SNRNP27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
translation: MPEPLAVGVPDTGKVPAASQRSPTTEPRHSRSTFGLQAGPGEPRPKGPHRPAPACLNPGAWTEDAVEDFCCCSFTSGVPRGVPEPRGAGGAVPRSPLGIFCGISFGQRAVKQLLTLPRAERRRSRSTSRDRDRRRRERSRSRDRDRRRSRSRSPHRRRSRSPRRHRSSSSSPARPKERRDEEKKELKDSKKERQITEEDLQGKTEEEIEMMKMMGFASFDTTKGKKVDGAANAYAINVSQKRKYRQYMNRKGGFNRPLDFIA
SIO_010081: SNRNP27
subclass of: SO_0000673
so part of: SNRNP27
location: complement(join(366801..366855,367368..367432,367526..367605,367734..367843,368055..368096,368163..368404,369670..369864))
location: region:366801-369864:-1
so has part: feature:369670-369864:-1:exon
so has part: feature:368163-368404:-1:exon
so has part: feature:368055-368096:-1:exon
so has part: feature:367734-367843:-1:exon
so has part: feature:367526-367605:-1:exon
so has part: feature:367368-367432:-1:exon
so has part: feature:366801-366855:-1:exon

XP_016159024.1
type: Protein
SIO_000068: ncbiprotein

position:366801:-1
position: 366801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369670-369864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368163-368404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368055-368096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367734-367843:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:367526-367605:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:367368-367432:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:366801-366855:-1:exon

ADD2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ADD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(370380..386350)
location: region:370380-386350:-1
so has part: feature:370380-386350:-1:exon
subclass of: SO_0000010

101809939
type: Gene
SIO_000068: ncbigene

position:370380:-1
position: 370380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386350:-1
position: 386350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370380-386350:-1:exon

ADD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ADD2
product: adducin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303591.1
SIO_010081: ADD2
subclass of: SO_0000673
so part of: ADD2
location: complement(join(370380..372948,373921..374010,374093..374243,374967..375056,375143..375244,375294..375311,376002..376259,376337..376516,380039..380137,380219..380378,381415..381548,381621..381701,382741..382892,383383..383521,384197..384341,384523..384552,386254..386350))
location: region:370380-386350:-1
so has part: feature:386254-386350:-1:exon
so has part: feature:384523-384552:-1:exon
so has part: feature:384197-384341:-1:exon
so has part: feature:383383-383521:-1:exon
so has part: feature:382741-382892:-1:exon
so has part: feature:381621-381701:-1:exon
so has part: feature:381415-381548:-1:exon
so has part: feature:380219-380378:-1:exon
so has part: feature:380039-380137:-1:exon
so has part: feature:376337-376516:-1:exon
so has part: feature:376002-376259:-1:exon
so has part: feature:375294-375311:-1:exon
so has part: feature:375143-375244:-1:exon
so has part: feature:374967-375056:-1:exon
so has part: feature:374093-374243:-1:exon
so has part: feature:373921-374010:-1:exon
so has part: feature:370380-372948:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386254-386350:-1:exon

position:386254:-1
position: 386254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:384523-384552:-1:exon

position:384523:-1
position: 384523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384552:-1
position: 384552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384197-384341:-1:exon

position:384197:-1
position: 384197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384341:-1
position: 384341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:383383-383521:-1:exon

position:383383:-1
position: 383383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383521:-1
position: 383521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:382741-382892:-1:exon

position:382741:-1
position: 382741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382892:-1
position: 382892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:381621-381701:-1:exon

position:381621:-1
position: 381621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381701:-1
position: 381701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:381415-381548:-1:exon

position:381415:-1
position: 381415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381548:-1
position: 381548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:380219-380378:-1:exon

position:380219:-1
position: 380219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380378:-1
position: 380378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:380039-380137:-1:exon

position:380039:-1
position: 380039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380137:-1
position: 380137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:376337-376516:-1:exon

position:376337:-1
position: 376337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376516:-1
position: 376516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:376002-376259:-1:exon

position:376002:-1
position: 376002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376259:-1
position: 376259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:375294-375311:-1:exon

position:375294:-1
position: 375294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375311:-1
position: 375311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:375143-375244:-1:exon

position:375143:-1
position: 375143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375244:-1
position: 375244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:374967-375056:-1:exon

position:374967:-1
position: 374967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375056:-1
position: 375056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:374093-374243:-1:exon

position:374093:-1
position: 374093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374243:-1
position: 374243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:373921-374010:-1:exon

position:373921:-1
position: 373921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374010:-1
position: 374010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:370380-372948:-1:exon

position:372948:-1
position: 372948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ADD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-adducin
translation: MSTAASPEPLPELPAPGPRCPIQEDPEFLRARSGAGDLRQDFNLMEQKKRVTMILQSPSFREELESLIQEQMKKGNNSSHVWALRQIADFMATTSPAALPTSPMGLASVTPINDLHGTEGPALAKGERLMRCKVGSIHRLLDLYGWAQLGHAAVTLRVSKEQEHFLVAPQGLACSEVTAASLVKVNVLGAVVEQGSTGFAPDARSFSLHAAIYAARPDIRCIVRLHTPRRAQVSAMRCGLLPISRAALLLGDVAYFDFRGEVEDEADRVELQKCLGPTCKILVLRNHGVLALGDTAEEAFYSIFHLQAACEVQVSALASAGGAQNLIVLERAQQRVPHGLGAVRRAGTTFGPLHKSRLGEHEFEALMRMLDNLGYRTGYTYRYPFVQEKSKPKSDVLIPATVTAFVFEEEPAGTPALRQHAQKQQKEKTRWLNTPNTYTRVNLAEEPQGSVGGQRTKTTWLRADEVEKGSSGTPIRIENPNQFVPLYTDPQEVLEMRNKIREQNRQDVKSAGPQSQLLASVIAETSRSPSTESHLGDAEAKEGREEAPPEPEPPNPFSQLTDQELEEYKQEVERKKRLEGEKDAAAEESGAPPPEPPPPEPPAPAEPTEGDKKDDGSKAPPDSTAKKEPPAVVNGKDEEQSTEENLGKGETDRTTTNADQDAPKEKETVTSNPVSPDGSPSKSPSKKKKKFRTPSFLKKGKKKEKIES
SIO_010081: ADD2
subclass of: SO_0000673
so part of: ADD2
location: complement(join(372650..372948,373921..374010,374093..374243,374967..375056,375143..375244,375294..375311,376002..376259,376337..376516,380039..380137,380219..380378,381415..381548,381621..381701,382741..382892,383383..383521,384197..384341,384523..384551))
location: region:372650-384551:-1
so has part: feature:384523-384551:-1:exon
so has part: feature:384197-384341:-1:exon
so has part: feature:383383-383521:-1:exon
so has part: feature:382741-382892:-1:exon
so has part: feature:381621-381701:-1:exon
so has part: feature:381415-381548:-1:exon
so has part: feature:380219-380378:-1:exon
so has part: feature:380039-380137:-1:exon
so has part: feature:376337-376516:-1:exon
so has part: feature:376002-376259:-1:exon
so has part: feature:375294-375311:-1:exon
so has part: feature:375143-375244:-1:exon
so has part: feature:374967-375056:-1:exon
so has part: feature:374093-374243:-1:exon
so has part: feature:373921-374010:-1:exon
so has part: feature:372650-372948:-1:exon

XP_016159077.1
type: Protein
SIO_000068: ncbiprotein

position:372650:-1
position: 372650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384551:-1
position: 384551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384523-384551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:384197-384341:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383383-383521:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:382741-382892:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:381621-381701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:381415-381548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:380219-380378:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:380039-380137:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376337-376516:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:376002-376259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375294-375311:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:375143-375244:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:374967-375056:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:374093-374243:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:373921-374010:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:372650-372948:-1:exon

LOC101810322
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101810322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 406182..438169
location: region:406182-438169:1
so has part: feature:406182-438169:1:exon
subclass of: SO_0000010

101810322
type: Gene
SIO_000068: ncbigene

position:406182:1
position: 406182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438169:1
position: 438169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406182-438169:1:exon

LOC101810322
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101810322
product: hexokinase-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005057936.1
SIO_010081: LOC101810322
subclass of: SO_0000673
so part of: LOC101810322
location: join(406182..406287,414099..414261,419825..419973,420140..420259,423686..423781,423898..423997,424278..424461,425345..425500,425637..425870,426121..426425,427008..427156,427882..428001,428089..428184,428978..429077,429182..429365,429596..429751,430202..430435,432553..438169)
location: region:406182-438169:1
so has part: feature:406182-406287:1:exon
so has part: feature:414099-414261:1:exon
so has part: feature:419825-419973:1:exon
so has part: feature:420140-420259:1:exon
so has part: feature:423686-423781:1:exon
so has part: feature:423898-423997:1:exon
so has part: feature:424278-424461:1:exon
so has part: feature:425345-425500:1:exon
so has part: feature:425637-425870:1:exon
so has part: feature:426121-426425:1:exon
so has part: feature:427008-427156:1:exon
so has part: feature:427882-428001:1:exon
so has part: feature:428089-428184:1:exon
so has part: feature:428978-429077:1:exon
so has part: feature:429182-429365:1:exon
so has part: feature:429596-429751:1:exon
so has part: feature:430202-430435:1:exon
so has part: feature:432553-438169:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:406182-406287:1:exon

position:406287:1
position: 406287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414099-414261:1:exon

position:414099:1
position: 414099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414261:1
position: 414261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:419825-419973:1:exon

position:419825:1
position: 419825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419973:1
position: 419973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:420140-420259:1:exon

position:420140:1
position: 420140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420259:1
position: 420259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:423686-423781:1:exon

position:423686:1
position: 423686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423781:1
position: 423781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:423898-423997:1:exon

position:423898:1
position: 423898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423997:1
position: 423997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:424278-424461:1:exon

position:424278:1
position: 424278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424461:1
position: 424461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:425345-425500:1:exon

position:425345:1
position: 425345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425500:1
position: 425500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:425637-425870:1:exon

position:425637:1
position: 425637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425870:1
position: 425870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:426121-426425:1:exon

position:426121:1
position: 426121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426425:1
position: 426425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:427008-427156:1:exon

position:427008:1
position: 427008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427156:1
position: 427156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:427882-428001:1:exon

position:427882:1
position: 427882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428001:1
position: 428001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:428089-428184:1:exon

position:428089:1
position: 428089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428184:1
position: 428184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:428978-429077:1:exon

position:428978:1
position: 428978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429077:1
position: 429077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:429182-429365:1:exon

position:429182:1
position: 429182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429365:1
position: 429365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:429596-429751:1:exon

position:429596:1
position: 429596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429751:1
position: 429751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:430202-430435:1:exon

position:430202:1
position: 430202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430435:1
position: 430435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:432553-438169:1:exon

position:432553:1
position: 432553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101810322
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101810322
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hexokinase-2
translation: MIASHLLAYFFTELNHDQTQKIDKYLYHMRLSDETLLEVSQRFEKEMEKGLGADTNPTASVKMLPTFVRSTPDGTEDGDFLALDLGGTNFRVLRVKVSDNGLRKVEMENQIYAIPEELMRGSGVQLFDHIAECLANFLDKLQIKDKKLPLGFTFSFPCHQTKLDESILVTWTKGFKCSSVEGRDVVSLLRKSIRKRGDFDIDIVAVVNDTVGTMMTCGYDDHNCEVGLIVGTGTNACYMEEMRHIDLVEGDEGRMCINMEWGAFGDDGVLNDIRTEFDREIDMGSLNPGKQLFEKMISGMYMGELVRLILVKMAKEGLLFGGRLTPDLLTTGHFETRFVSAIEKEKEGLQKAHEILSKLGLEPSHEDCLATLRICQIVSTRSASLCGATLAAVLRRIKDNKGVERLRSTVGVDGSVYKKHPHFARRLHKTVRKLLPDCEIRFIRSEDGSGKGAAMVTAVAYRLAAQHKARQKILEPLKLSHEQLLEVKERMRIEMEKGLGKETHAEATVKMLPTYVCSTPDGTEKGDFLALDLGGTNFRVLLVRVRNGMRRGVEMHNKIYSIPVEIMQGTGEELFDHIVHCISDFLEYMGMKGVSLPLGFTFSFPCQQNNLDEGILLKWTKGFKATGCEGEDVVGLLKEAIHRREEFDLDVVAVVNDTVGTMMTCGYEDPYCEVGLIVGTGSNACYMEEMRNVELVEGDEGRMCVNMEWGAFGDSGCLDDIRTEFDVAVDELSLNPGKQRYEKMISGMYLGEIVRNILMDFTKKGLLFRGRISERLKTRGIFETKFLSQIESDCLALLQVRSILQHLGLESTCDDSIIVKEVCTVVARRAAQLCGAGMAAVVDKIRENRGLDFLKITVGVDGTLYKLHPHFSNILHETVKQLSPKCEVTFLQSEDGSGKGAALITAVACRIREAGQR
SIO_010081: LOC101810322
subclass of: SO_0000673
so part of: LOC101810322
location: join(406225..406287,414099..414261,419825..419973,420140..420259,423686..423781,423898..423997,424278..424461,425345..425500,425637..425870,426121..426425,427008..427156,427882..428001,428089..428184,428978..429077,429182..429365,429596..429751,430202..430435,432553..432697)
location: region:406225-432697:1
so has part: feature:406225-406287:1:exon
so has part: feature:414099-414261:1:exon
so has part: feature:419825-419973:1:exon
so has part: feature:420140-420259:1:exon
so has part: feature:423686-423781:1:exon
so has part: feature:423898-423997:1:exon
so has part: feature:424278-424461:1:exon
so has part: feature:425345-425500:1:exon
so has part: feature:425637-425870:1:exon
so has part: feature:426121-426425:1:exon
so has part: feature:427008-427156:1:exon
so has part: feature:427882-428001:1:exon
so has part: feature:428089-428184:1:exon
so has part: feature:428978-429077:1:exon
so has part: feature:429182-429365:1:exon
so has part: feature:429596-429751:1:exon
so has part: feature:430202-430435:1:exon
so has part: feature:432553-432697:1:exon

XP_005057993.1
type: Protein
SIO_000068: ncbiprotein

position:406225:1
position: 406225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432697:1
position: 432697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406225-406287:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414099-414261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:419825-419973:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:420140-420259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423686-423781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:423898-423997:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:424278-424461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:425345-425500:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:425637-425870:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426121-426425:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:427008-427156:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:427882-428001:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:428089-428184:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:428978-429077:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:429182-429365:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:429596-429751:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:430202-430435:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:432553-432697:1:exon

GMCL1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GMCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(437370..456079)
location: region:437370-456079:-1
so has part: feature:437370-456079:-1:exon
subclass of: SO_0000010

101810139
type: Gene
SIO_000068: ncbigene

position:437370:-1
position: 437370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456079:-1
position: 456079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437370-456079:-1:exon

GMCL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GMCL1
product: germ cell-less, spermatogenesis associated 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016303579.1
SIO_010081: GMCL1
subclass of: SO_0000673
so part of: GMCL1
location: complement(join(437370..438676,439506..439593,440609..440684,443741..443810,449377..449517,449727..449817,449995..450079,450243..450308,450772..450884,451361..451458,453143..453239,455857..456079))
location: region:437370-456079:-1
so has part: feature:455857-456079:-1:exon
so has part: feature:453143-453239:-1:exon
so has part: feature:451361-451458:-1:exon
so has part: feature:450772-450884:-1:exon
so has part: feature:450243-450308:-1:exon
so has part: feature:449995-450079:-1:exon
so has part: feature:449727-449817:-1:exon
so has part: feature:449377-449517:-1:exon
so has part: feature:443741-443810:-1:exon
so has part: feature:440609-440684:-1:exon
so has part: feature:439506-439593:-1:exon
so has part: feature:437370-438676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455857-456079:-1:exon

position:455857:-1
position: 455857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:453143-453239:-1:exon

position:453143:-1
position: 453143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453239:-1
position: 453239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451361-451458:-1:exon

position:451361:-1
position: 451361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451458:-1
position: 451458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450772-450884:-1:exon

position:450772:-1
position: 450772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450884:-1
position: 450884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:450243-450308:-1:exon

position:450243:-1
position: 450243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450308:-1
position: 450308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:449995-450079:-1:exon

position:449995:-1
position: 449995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450079:-1
position: 450079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:449727-449817:-1:exon

position:449727:-1
position: 449727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449817:-1
position: 449817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:449377-449517:-1:exon

position:449377:-1
position: 449377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449517:-1
position: 449517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:443741-443810:-1:exon

position:443741:-1
position: 443741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443810:-1
position: 443810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:440609-440684:-1:exon

position:440609:-1
position: 440609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440684:-1
position: 440684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:439506-439593:-1:exon

position:439506:-1
position: 439506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439593:-1
position: 439593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:437370-438676:-1:exon

position:438676:-1
position: 438676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GMCL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GMCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: germ cell-less protein-like 1 isoform X2
translation: MECFSLFVVCCFVFARKKLKSTSKYIYQTLFLNGENSDIKICALGEEWNLHKIYLCQSGYFSSMFSGSWKESSMNVIELEIPDQNIDVEALQVAFGSLYRDDVLINPSRVVALLAAACMLQLDGLIQQCGETMKETITAQTVCGYYNSAGTYGLDSVKKKCLEWLLNNLMTHQSVGLFKELSINLMMQLISSSNLFVLQVEMDVYTALKKWMFLQLVPSWNGSFKQVLTEADAWFAERRREFGGDIAFLESAQGSAFLPVFAHLRLQYIISDLASARIVERDALLPSEWLSSVYKQQWFAMLRAEQDNDIGPQEINKEELEGNSMRCGRKLAKDGDVTPSLVRLQWEDDLQQDNGLSDPDPGEGPGADCDEFGQQTPDVPPVHLLQLPVHITREEGRQRGPAGSFGSLRPPWGLWQLLCRPGCCSKAWTGRPYPVAPPLALALVVSYAALKRSDLR
SIO_010081: GMCL1
subclass of: SO_0000673
so part of: GMCL1
location: complement(join(438402..438676,439506..439593,440609..440684,443741..443810,449377..449517,449727..449817,449995..450079,450243..450308,450772..450884,451361..451458,453143..453239,455857..456027))
location: region:438402-456027:-1
so has part: feature:455857-456027:-1:exon
so has part: feature:453143-453239:-1:exon
so has part: feature:451361-451458:-1:exon
so has part: feature:450772-450884:-1:exon
so has part: feature:450243-450308:-1:exon
so has part: feature:449995-450079:-1:exon
so has part: feature:449727-449817:-1:exon
so has part: feature:449377-449517:-1:exon
so has part: feature:443741-443810:-1:exon
so has part: feature:440609-440684:-1:exon
so has part: feature:439506-439593:-1:exon
so has part: feature:438402-438676:-1:exon

XP_016159065.1
type: Protein
SIO_000068: ncbiprotein

position:438402:-1
position: 438402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456027:-1
position: 456027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455857-456027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453143-453239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451361-451458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450772-450884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450243-450308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449995-450079:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449727-449817:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449377-449517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443741-443810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440609-440684:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439506-439593:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:438402-438676:-1:exon

GMCL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GMCL1
product: germ cell-less, spermatogenesis associated 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005057935.2
SIO_010081: GMCL1
subclass of: SO_0000673
so part of: GMCL1
location: complement(join(438452..438676,439506..439593,439752..439897,440609..440684,443741..443810,449377..449517,449727..449817,449995..450079,450243..450308,450772..450884,451361..451458,453143..453239,455857..456042))
location: region:438452-456042:-1
so has part: feature:455857-456042:-1:exon
so has part: feature:453143-453239:-1:exon
so has part: feature:451361-451458:-1:exon
so has part: feature:450772-450884:-1:exon
so has part: feature:450243-450308:-1:exon
so has part: feature:449995-450079:-1:exon
so has part: feature:449727-449817:-1:exon
so has part: feature:449377-449517:-1:exon
so has part: feature:443741-443810:-1:exon
so has part: feature:440609-440684:-1:exon
so has part: feature:439752-439897:-1:exon
so has part: feature:439506-439593:-1:exon
so has part: feature:438452-438676:-1:exon

position:438452:-1
position: 438452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456042:-1
position: 456042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455857-456042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453143-453239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451361-451458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450772-450884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450243-450308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449995-450079:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449727-449817:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449377-449517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443741-443810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440609-440684:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439752-439897:-1:exon

position:439752:-1
position: 439752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439897:-1
position: 439897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:439506-439593:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:438452-438676:-1:exon

GMCL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GMCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: germ cell-less protein-like 1 isoform X1
translation: MECFSLFVVCCFVFARKKLKSTSKYIYQTLFLNGENSDIKICALGEEWNLHKIYLCQSGYFSSMFSGSWKESSMNVIELEIPDQNIDVEALQVAFGSLYRDDVLINPSRVVALLAAACMLQLDGLIQQCGETMKETITAQTVCGYYNSAGTYGLDSVKKKCLEWLLNNLMTHQSVGLFKELSINLMMQLISSSNLFVLQVEMDVYTALKKWMFLQLVPSWNGSFKQVLTEADAWFAERRREFGGDIAFLESAQGSAFLPVFAHLRLQYIISDLASARIVERDALLPSEWLSSVYKQQWFAMLRAEQDNDIGPQEINKEELEGNSMRCGRKLAKDGDYCWRWTGFNFGLDLLVTYTNRYIIFKRNTLNQLCSGAVSLQPRRSIAFRLRLASFDCSGKMICSRTTGYQILTLEKDQEQIVMNLDSRLLTFPLYICCNFLYTSPEKRADSEAQLDHLEA
SIO_010081: GMCL1
subclass of: SO_0000673
so part of: GMCL1
location: complement(join(438548..438676,439506..439593,439752..439897,440609..440684,443741..443810,449377..449517,449727..449817,449995..450079,450243..450308,450772..450884,451361..451458,453143..453239,455857..456027))
location: region:438548-456027:-1
so has part: feature:455857-456027:-1:exon
so has part: feature:453143-453239:-1:exon
so has part: feature:451361-451458:-1:exon
so has part: feature:450772-450884:-1:exon
so has part: feature:450243-450308:-1:exon
so has part: feature:449995-450079:-1:exon
so has part: feature:449727-449817:-1:exon
so has part: feature:449377-449517:-1:exon
so has part: feature:443741-443810:-1:exon
so has part: feature:440609-440684:-1:exon
so has part: feature:439752-439897:-1:exon
so has part: feature:439506-439593:-1:exon
so has part: feature:438548-438676:-1:exon

XP_005057992.1
type: Protein
SIO_000068: ncbiprotein

position:438548:-1
position: 438548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455857-456027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:453143-453239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451361-451458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450772-450884:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450243-450308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449995-450079:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:449727-449817:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:449377-449517:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443741-443810:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440609-440684:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439752-439897:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:439506-439593:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:438548-438676:-1:exon

ANXA4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ANXA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(459115..469685)
location: region:459115-469685:-1
so has part: feature:459115-469685:-1:exon
subclass of: SO_0000010

101810636
type: Gene
SIO_000068: ncbigene

position:459115:-1
position: 459115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469685:-1
position: 469685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:459115-469685:-1:exon

ANXA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ANXA4
product: annexin A4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005057939.2
SIO_010081: ANXA4
subclass of: SO_0000673
so part of: ANXA4
location: complement(join(459115..460623,460862..460984,461267..461325,461762..461857,462338..462431,462852..462908,463263..463342,463986..464076,464241..464354,464613..464707,465070..465145,466196..466251,469583..469685))
location: region:459115-469685:-1
so has part: feature:469583-469685:-1:exon
so has part: feature:466196-466251:-1:exon
so has part: feature:465070-465145:-1:exon
so has part: feature:464613-464707:-1:exon
so has part: feature:464241-464354:-1:exon
so has part: feature:463986-464076:-1:exon
so has part: feature:463263-463342:-1:exon
so has part: feature:462852-462908:-1:exon
so has part: feature:462338-462431:-1:exon
so has part: feature:461762-461857:-1:exon
so has part: feature:461267-461325:-1:exon
so has part: feature:460862-460984:-1:exon
so has part: feature:459115-460623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469583-469685:-1:exon

position:469583:-1
position: 469583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466196-466251:-1:exon

position:466196:-1
position: 466196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466251:-1
position: 466251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465070-465145:-1:exon

position:465070:-1
position: 465070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465145:-1
position: 465145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464613-464707:-1:exon

position:464613:-1
position: 464613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464707:-1
position: 464707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:464241-464354:-1:exon

position:464241:-1
position: 464241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464354:-1
position: 464354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:463986-464076:-1:exon

position:463986:-1
position: 463986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464076:-1
position: 464076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:463263-463342:-1:exon

position:463263:-1
position: 463263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463342:-1
position: 463342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:462852-462908:-1:exon

position:462852:-1
position: 462852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462908:-1
position: 462908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:462338-462431:-1:exon

position:462338:-1
position: 462338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462431:-1
position: 462431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:461762-461857:-1:exon

position:461762:-1
position: 461762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461857:-1
position: 461857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:461267-461325:-1:exon

position:461267:-1
position: 461267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461325:-1
position: 461325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:460862-460984:-1:exon

position:460862:-1
position: 460862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460984:-1
position: 460984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:459115-460623:-1:exon

position:460623:-1
position: 460623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANXA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ANXA4
product: annexin A4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016303604.1
SIO_010081: ANXA4
subclass of: SO_0000673
so part of: ANXA4
location: complement(join(459115..460623,460862..460984,461267..461325,461762..461857,462338..462431,462852..462908,463263..463342,463986..464076,464241..464354,464613..464707,465070..465145,466196..466251,469216..469277))
location: region:459115-469277:-1
so has part: feature:469216-469277:-1:exon
so has part: feature:466196-466251:-1:exon
so has part: feature:465070-465145:-1:exon
so has part: feature:464613-464707:-1:exon
so has part: feature:464241-464354:-1:exon
so has part: feature:463986-464076:-1:exon
so has part: feature:463263-463342:-1:exon
so has part: feature:462852-462908:-1:exon
so has part: feature:462338-462431:-1:exon
so has part: feature:461762-461857:-1:exon
so has part: feature:461267-461325:-1:exon
so has part: feature:460862-460984:-1:exon
so has part: feature:459115-460623:-1:exon

position:469277:-1
position: 469277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469216-469277:-1:exon

position:469216:-1
position: 469216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466196-466251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465070-465145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464613-464707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:464241-464354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463986-464076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:463263-463342:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462852-462908:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:462338-462431:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461762-461857:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:461267-461325:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460862-460984:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:459115-460623:-1:exon

ANXA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ANXA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A4
translation: MATVKGVSTFSAEQEAQALRKAMKGLGTDEDAIIESLTKLNVSQRQQVLITYKSTIGRDLIDDLKSELSGNFERVIIALMTPTTMYDVHELRRALKGAGTDEGCLIEILASRTNAEIRHINENYKLQYGSTLEDDIVSDTSSMFRRVLVSLATGNRDEGTFVDEALAQQDAQCLYEAGEKKWGTDEVQFMSILCTRNRCHLLRVFDVYRLIANKDITESIKSEMSGDLEDALLAVVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRSEIDMLYIRREFLATYGKSLHSFIKGDCSGDYRKVLLRLCGGED
SIO_010081: ANXA4
subclass of: SO_0000673
so part of: ANXA4
location: complement(join(460564..460623,460862..460984,461267..461325,461762..461857,462338..462431,462852..462908,463263..463342,463986..464076,464241..464354,464613..464707,465070..465145,466196..466198))
location: region:460564-466198:-1
so has part: feature:466196-466198:-1:exon
so has part: feature:465070-465145:-1:exon
so has part: feature:464613-464707:-1:exon
so has part: feature:464241-464354:-1:exon
so has part: feature:463986-464076:-1:exon
so has part: feature:463263-463342:-1:exon
so has part: feature:462852-462908:-1:exon
so has part: feature:462338-462431:-1:exon
so has part: feature:461762-461857:-1:exon
so has part: feature:461267-461325:-1:exon
so has part: feature:460862-460984:-1:exon
so has part: feature:460564-460623:-1:exon

XP_016159090.1
type: Protein
SIO_000068: ncbiprotein

position:460564:-1
position: 460564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466198:-1
position: 466198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466196-466198:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465070-465145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464613-464707:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464241-464354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463986-464076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463263-463342:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462852-462908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462338-462431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461762-461857:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461267-461325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460862-460984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460564-460623:-1:exon

ANXA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ANXA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: annexin A4
translation: MATVKGVSTFSAEQEAQALRKAMKGLGTDEDAIIESLTKLNVSQRQQVLITYKSTIGRDLIDDLKSELSGNFERVIIALMTPTTMYDVHELRRALKGAGTDEGCLIEILASRTNAEIRHINENYKLQYGSTLEDDIVSDTSSMFRRVLVSLATGNRDEGTFVDEALAQQDAQCLYEAGEKKWGTDEVQFMSILCTRNRCHLLRVFDVYRLIANKDITESIKSEMSGDLEDALLAVVKCMRNKPAYFAERLYKSMKGLGTDDSTLIRVMVSRSEIDMLYIRREFLATYGKSLHSFIKGDCSGDYRKVLLRLCGGED
SIO_010081: ANXA4
subclass of: SO_0000673
so part of: ANXA4
location: complement(join(460564..460623,460862..460984,461267..461325,461762..461857,462338..462431,462852..462908,463263..463342,463986..464076,464241..464354,464613..464707,465070..465145,466196..466198))
location: region:460564-466198:-1
so has part: feature:466196-466198:-1:exon
so has part: feature:465070-465145:-1:exon
so has part: feature:464613-464707:-1:exon
so has part: feature:464241-464354:-1:exon
so has part: feature:463986-464076:-1:exon
so has part: feature:463263-463342:-1:exon
so has part: feature:462852-462908:-1:exon
so has part: feature:462338-462431:-1:exon
so has part: feature:461762-461857:-1:exon
so has part: feature:461267-461325:-1:exon
so has part: feature:460862-460984:-1:exon
so has part: feature:460564-460623:-1:exon

XP_005057996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466196-466198:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465070-465145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464613-464707:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464241-464354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463986-464076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:463263-463342:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462852-462908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:462338-462431:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461762-461857:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:461267-461325:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:460862-460984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:460564-460623:-1:exon

LOC101810504
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101810504
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(471449..477414)
location: region:471449-477414:-1
so has part: feature:471449-477414:-1:exon
subclass of: SO_0000011

101810504
type: Gene
SIO_000068: ncbigene

position:471449:-1
position: 471449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477414:-1
position: 477414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471449-477414:-1:exon

LOC101810504
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101810504
product: uncharacterized LOC101810504, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001611957.1
SIO_010081: LOC101810504
subclass of: SO_0000673
so part of: LOC101810504
location: complement(join(471449..471534,475889..475995,477276..477414))
location: region:471449-477414:-1
so has part: feature:477276-477414:-1:exon
so has part: feature:475889-475995:-1:exon
so has part: feature:471449-471534:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477276-477414:-1:exon

position:477276:-1
position: 477276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475889-475995:-1:exon

position:475889:-1
position: 475889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475995:-1
position: 475995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:471449-471534:-1:exon

position:471534:-1
position: 471534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101810504
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101810504
product: uncharacterized LOC101810504, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_219291.1
SIO_010081: LOC101810504
subclass of: SO_0000673
so part of: LOC101810504
location: complement(join(474819..475428,475889..475995,477276..477414))
location: region:474819-477414:-1
so has part: feature:477276-477414:-1:exon
so has part: feature:475889-475995:-1:exon
so has part: feature:474819-475428:-1:exon

position:474819:-1
position: 474819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477276-477414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475889-475995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474819-475428:-1:exon

position:475428:-1
position: 475428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AAK1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: AAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 478593..540682
location: region:478593-540682:1
so has part: feature:478593-540682:1:exon
subclass of: SO_0000010

101819511
type: Gene
SIO_000068: ncbigene

position:478593:1
position: 478593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540682:1
position: 540682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478593-540682:1:exon

AAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AAK1
product: AP2 associated kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303605.1
SIO_010081: AAK1
subclass of: SO_0000673
so part of: AAK1
location: join(478593..478725,478941..479048,500541..500659,502749..502857,505926..506068,509884..510005,511386..511467,513229..513361,514518..514621,515572..515651,516386..516540,516623..516903,517093..517305,520370..520617,521434..521591,521950..522066,523756..523851,531769..531870,532882..532983,533838..533948,536638..536742,538286..540682)
location: region:478593-540682:1
so has part: feature:478593-478725:1:exon
so has part: feature:478941-479048:1:exon
so has part: feature:500541-500659:1:exon
so has part: feature:502749-502857:1:exon
so has part: feature:505926-506068:1:exon
so has part: feature:509884-510005:1:exon
so has part: feature:511386-511467:1:exon
so has part: feature:513229-513361:1:exon
so has part: feature:514518-514621:1:exon
so has part: feature:515572-515651:1:exon
so has part: feature:516386-516540:1:exon
so has part: feature:516623-516903:1:exon
so has part: feature:517093-517305:1:exon
so has part: feature:520370-520617:1:exon
so has part: feature:521434-521591:1:exon
so has part: feature:521950-522066:1:exon
so has part: feature:523756-523851:1:exon
so has part: feature:531769-531870:1:exon
so has part: feature:532882-532983:1:exon
so has part: feature:533838-533948:1:exon
so has part: feature:536638-536742:1:exon
so has part: feature:538286-540682:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478593-478725:1:exon

position:478725:1
position: 478725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:478941-479048:1:exon

position:478941:1
position: 478941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479048:1
position: 479048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500541-500659:1:exon

position:500541:1
position: 500541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500659:1
position: 500659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:502749-502857:1:exon

position:502749:1
position: 502749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502857:1
position: 502857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:505926-506068:1:exon

position:505926:1
position: 505926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506068:1
position: 506068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:509884-510005:1:exon

position:509884:1
position: 509884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510005:1
position: 510005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:511386-511467:1:exon

position:511386:1
position: 511386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511467:1
position: 511467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:513229-513361:1:exon

position:513229:1
position: 513229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513361:1
position: 513361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:514518-514621:1:exon

position:514518:1
position: 514518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514621:1
position: 514621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:515572-515651:1:exon

position:515572:1
position: 515572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515651:1
position: 515651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:516386-516540:1:exon

position:516386:1
position: 516386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516540:1
position: 516540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:516623-516903:1:exon

position:516623:1
position: 516623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516903:1
position: 516903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:517093-517305:1:exon

position:517093:1
position: 517093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517305:1
position: 517305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:520370-520617:1:exon

position:520370:1
position: 520370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520617:1
position: 520617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:521434-521591:1:exon

position:521434:1
position: 521434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521591:1
position: 521591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:521950-522066:1:exon

position:521950:1
position: 521950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522066:1
position: 522066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:523756-523851:1:exon

position:523756:1
position: 523756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523851:1
position: 523851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:531769-531870:1:exon

position:531769:1
position: 531769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531870:1
position: 531870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:532882-532983:1:exon

position:532882:1
position: 532882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532983:1
position: 532983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:533838-533948:1:exon

position:533838:1
position: 533838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533948:1
position: 533948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:536638-536742:1:exon

position:536638:1
position: 536638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536742:1
position: 536742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:538286-540682:1:exon

position:538286:1
position: 538286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP2-associated protein kinase 1
translation: MKKFFDSRREQGGSGPGSGTSGGGGSRSAGVCRWTRSGYIGRVFSIGRHQVTVDEVLAEGGFAIVFLVRTSNGVKCALKRMYVNNEYDLQVCKREIQIMRDLSGHKNIVGYIDSSINPVSSGDVWEVLILMDFCRGGQVVNLMNQRLQTGFTESEVLQIFCDTCEAVARLHQCKTPIIHRDLKVENILLHDRGHYVLCDFGSATNKFQNPQTEGVNAVEEEIKKYTTLSYRAPEMVNLYSGKLITTKADIWALGCLLYKLCYFTLPFGESQVAICDGNFTIPDNSRHSQDMHCLIRYMLEPDPDKRPDIYQVSYFAFKLAKKDCPVQNVQNSPIPAKLPDPVKASEAAAKKSQPKARLTDPIPTTETSIAPRQRPKAGQTQPNPGILPIQPALTPRKRATAQAAIQPQVAGPAALGSAQPALPASTPQPKAAPQQPPAQPQAKPAAAPQAQPQVPSTQPQATPQHQQQLFLKQQLLQQQQQQQQQQQAAYFQQQQQMMQAQQFPAMQQGAPAQQPLMQNYYQQQQQQLLAQQAAMQQKSTAAAAAQQKQQPLAPAQPEAQPSAAAPAPPQEQGAQAQAQAQGRQQQQQQQQAQGPAPAQAQKPGSLTPPSSPKAQRAGHRRILSDVTHSAVFGVPASKSTQLLQAAAAEASLNKSKSASTTPSGSPRTSQQNVYNPPDVSTWNPFDDDNFSKLTAEELLNKDFAKLGEGKAPEKAGSSTENLIPGFQPAASAAPADAFGGSSFTAGPAEKTKDILSLDSNPPLLTVPDPFIPLPLSDTPEKLIEGLKSPEPALLLPELLPLADPFGSTSDAVNGKADVAVESLIPGLEAPLPQRLVSQSESVASNRTDSLTGEDSLLDCSLLSNPAADLLDEFAPVAFAAQPHKEDTNLISGFDAPEGSEKVTEDEFDPIPVLISKNSQGGHSRNNSGSSESSLPNIARSLLLVDQLIDL
SIO_010081: AAK1
subclass of: SO_0000673
so part of: AAK1
location: join(478656..478725,478941..479048,500541..500659,502749..502857,505926..506068,509884..510005,511386..511467,513229..513361,514518..514621,515572..515651,516386..516540,516623..516903,517093..517305,520370..520617,521434..521591,521950..522066,523756..523851,531769..531870,532882..532983,533838..533948,536638..536742,538286..538380)
location: region:478656-538380:1
so has part: feature:478656-478725:1:exon
so has part: feature:478941-479048:1:exon
so has part: feature:500541-500659:1:exon
so has part: feature:502749-502857:1:exon
so has part: feature:505926-506068:1:exon
so has part: feature:509884-510005:1:exon
so has part: feature:511386-511467:1:exon
so has part: feature:513229-513361:1:exon
so has part: feature:514518-514621:1:exon
so has part: feature:515572-515651:1:exon
so has part: feature:516386-516540:1:exon
so has part: feature:516623-516903:1:exon
so has part: feature:517093-517305:1:exon
so has part: feature:520370-520617:1:exon
so has part: feature:521434-521591:1:exon
so has part: feature:521950-522066:1:exon
so has part: feature:523756-523851:1:exon
so has part: feature:531769-531870:1:exon
so has part: feature:532882-532983:1:exon
so has part: feature:533838-533948:1:exon
so has part: feature:536638-536742:1:exon
so has part: feature:538286-538380:1:exon

XP_016159091.1
type: Protein
SIO_000068: ncbiprotein

position:478656:1
position: 478656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538380:1
position: 538380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478656-478725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478941-479048:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500541-500659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502749-502857:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505926-506068:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:509884-510005:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:511386-511467:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513229-513361:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514518-514621:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:515572-515651:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:516386-516540:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:516623-516903:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:517093-517305:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:520370-520617:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:521434-521591:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:521950-522066:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:523756-523851:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531769-531870:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:532882-532983:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:533838-533948:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:536638-536742:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:538286-538380:1:exon

LOC107604134
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 549069..550472
location: region:549069-550472:1
so has part: feature:549069-550472:1:exon
subclass of: SO_0000010

107604134
type: Gene
SIO_000068: ncbigene

position:549069:1
position: 549069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550472:1
position: 550472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549069-550472:1:exon

LOC107604134
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604134
product: uncharacterized protein FLJ45252-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_016303539.1
SIO_010081: LOC107604134
subclass of: SO_0000673
so part of: LOC107604134
location: join(549069..549072,549367..550472)
location: region:549069-550472:1
so has part: feature:549069-549072:1:exon
so has part: feature:549367-550472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549069-549072:1:exon

position:549072:1
position: 549072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:549367-550472:1:exon

position:549367:1
position: 549367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107604134
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604134
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein FLJ45252-like
translation: MGLQRDPGRFPAGALELCKGDSGTDGLALYKGQPEMLEVKVQHNSESEYLARDGPSSNSSFYSSEGEGTDHEGDILDCSGSRPLLMDSEEEEETCKLCPGFLQPVPRHEASKEDAQSQARAGETLFPAFQSHAGEVFNEPDVFATAPFRSSRKVPDEVDVFTKAPFICKGNAALRHPEEADVFLRAPFTKKKSMEELTSHKEPFTPPVFLSQGGDGRAQPMFPCLDSAAHGSVASVRAPHPSAGFAQPGNLHPCSVRAGEAPESVPAKAALPERGRGQALPPEAAPGAVPGQPFRPHSLAKYSRHYGPEDGPGLEAKPIAAYKVVSQSNRQAIAGSVSVLPLSARTTELPASDPFSSAPFPFKAAKQNP
SIO_010081: LOC107604134
subclass of: SO_0000673
so part of: LOC107604134
location: join(549069..549072,549367..550472)
location: region:549069-550472:1
so has part: feature:549069-549072:1:exon
so has part: feature:549367-550472:1:exon

XP_016159025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549069-549072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:549367-550472:1:exon

NFU1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NFU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 558089..565494
location: region:558089-565494:1
so has part: feature:558089-565494:1:exon
subclass of: SO_0000010

101811091
type: Gene
SIO_000068: ncbigene

position:558089:1
position: 558089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565494:1
position: 565494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558089-565494:1:exon

NFU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NFU1
product: NFU1 iron-sulfur cluster scaffold, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005057943.2
SIO_010081: NFU1
subclass of: SO_0000673
so part of: NFU1
location: join(558089..558118,559172..559278,559620..559755,561474..561540,562030..562144,562342..562405,564406..564580,565258..565493)
location: region:558089-565493:1
so has part: feature:558089-558118:1:exon
so has part: feature:559172-559278:1:exon
so has part: feature:559620-559755:1:exon
so has part: feature:561474-561540:1:exon
so has part: feature:562030-562144:1:exon
so has part: feature:562342-562405:1:exon
so has part: feature:564406-564580:1:exon
so has part: feature:565258-565493:1:exon

position:565493:1
position: 565493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558089-558118:1:exon

position:558118:1
position: 558118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559172-559278:1:exon

position:559172:1
position: 559172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559278:1
position: 559278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559620-559755:1:exon

position:559620:1
position: 559620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559755:1
position: 559755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:561474-561540:1:exon

position:561474:1
position: 561474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561540:1
position: 561540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:562030-562144:1:exon

position:562030:1
position: 562030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562144:1
position: 562144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:562342-562405:1:exon

position:562342:1
position: 562342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562405:1
position: 562405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:564406-564580:1:exon

position:564406:1
position: 564406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564580:1
position: 564580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:565258-565493:1:exon

position:565258:1
position: 565258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NFU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X2
translation: MRFCRVLLKHHNLTTRQPFHQLLPKKPSLPSAAWHRAVRGMFIQTQDTPNPNSLKFIPGREVLESRTMEFSTPAAAYCSPLARQLFRIEGVKSVFFGPDFITITKESEDLDWNLLKPDIYAAIMDFFASGLPVVTDEAPRTDTAASEEDDEVVLMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVVDDDDDVEKEANST
SIO_010081: NFU1
subclass of: SO_0000673
so part of: NFU1
location: join(558114..558118,559172..559278,559620..559755,561474..561540,562030..562144,562342..562405,564406..564580,565258..565305)
location: region:558114-565305:1
so has part: feature:558114-558118:1:exon
so has part: feature:559172-559278:1:exon
so has part: feature:559620-559755:1:exon
so has part: feature:561474-561540:1:exon
so has part: feature:562030-562144:1:exon
so has part: feature:562342-562405:1:exon
so has part: feature:564406-564580:1:exon
so has part: feature:565258-565305:1:exon

XP_005058000.1
type: Protein
SIO_000068: ncbiprotein

position:558114:1
position: 558114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565305:1
position: 565305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558114-558118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559172-559278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559620-559755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561474-561540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562030-562144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562342-562405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564406-564580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:565258-565305:1:exon

NFU1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NFU1
product: NFU1 iron-sulfur cluster scaffold, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005057942.2
SIO_010081: NFU1
subclass of: SO_0000673
so part of: NFU1
location: join(558882..558933,559172..559278,559620..559755,561474..561540,562030..562144,562342..562405,564406..564580,565258..565494)
location: region:558882-565494:1
so has part: feature:558882-558933:1:exon
so has part: feature:559172-559278:1:exon
so has part: feature:559620-559755:1:exon
so has part: feature:561474-561540:1:exon
so has part: feature:562030-562144:1:exon
so has part: feature:562342-562405:1:exon
so has part: feature:564406-564580:1:exon
so has part: feature:565258-565494:1:exon

position:558882:1
position: 558882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558882-558933:1:exon

position:558933:1
position: 558933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:559172-559278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559620-559755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561474-561540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562030-562144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562342-562405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564406-564580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:565258-565494:1:exon

NFU1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NFU1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform X1
translation: MLLAVHIVTEIRFCRVLLKHHNLTTRQPFHQLLPKKPSLPSAAWHRAVRGMFIQTQDTPNPNSLKFIPGREVLESRTMEFSTPAAAYCSPLARQLFRIEGVKSVFFGPDFITITKESEDLDWNLLKPDIYAAIMDFFASGLPVVTDEAPRTDTAASEEDDEVVLMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPEVEGVEQVVDDDDDVEKEANST
SIO_010081: NFU1
subclass of: SO_0000673
so part of: NFU1
location: join(558899..558933,559172..559278,559620..559755,561474..561540,562030..562144,562342..562405,564406..564580,565258..565305)
location: region:558899-565305:1
so has part: feature:558899-558933:1:exon
so has part: feature:559172-559278:1:exon
so has part: feature:559620-559755:1:exon
so has part: feature:561474-561540:1:exon
so has part: feature:562030-562144:1:exon
so has part: feature:562342-562405:1:exon
so has part: feature:564406-564580:1:exon
so has part: feature:565258-565305:1:exon

XP_005057999.1
type: Protein
SIO_000068: ncbiprotein

position:558899:1
position: 558899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558899-558933:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:559172-559278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559620-559755:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:561474-561540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562030-562144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562342-562405:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564406-564580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:565258-565305:1:exon

GFPT1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GFPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 567587..610459
location: region:567587-610459:1
so has part: feature:567587-610459:1:exon
subclass of: SO_0000010

101811675
type: Gene
SIO_000068: ncbigene

position:567587:1
position: 567587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610459:1
position: 610459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567587-610459:1:exon

GFPT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GFPT1
product: glutamine--fructose-6-phosphate transaminase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005057944.2
SIO_010081: GFPT1
subclass of: SO_0000673
so part of: GFPT1
location: join(567587..567722,576727..576834,577959..578066,579394..579519,583393..583451,584353..584487,585203..585264,586315..586394,589382..589435,591493..591598,592538..592701,594766..594861,595144..595241,596296..596416,599043..599200,600971..601085,603400..603527,604335..604502,604800..604961,609470..610459)
location: region:567587-610459:1
so has part: feature:567587-567722:1:exon
so has part: feature:576727-576834:1:exon
so has part: feature:577959-578066:1:exon
so has part: feature:579394-579519:1:exon
so has part: feature:583393-583451:1:exon
so has part: feature:584353-584487:1:exon
so has part: feature:585203-585264:1:exon
so has part: feature:586315-586394:1:exon
so has part: feature:589382-589435:1:exon
so has part: feature:591493-591598:1:exon
so has part: feature:592538-592701:1:exon
so has part: feature:594766-594861:1:exon
so has part: feature:595144-595241:1:exon
so has part: feature:596296-596416:1:exon
so has part: feature:599043-599200:1:exon
so has part: feature:600971-601085:1:exon
so has part: feature:603400-603527:1:exon
so has part: feature:604335-604502:1:exon
so has part: feature:604800-604961:1:exon
so has part: feature:609470-610459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:567587-567722:1:exon

position:567722:1
position: 567722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576727-576834:1:exon

position:576727:1
position: 576727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576834:1
position: 576834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577959-578066:1:exon

position:577959:1
position: 577959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578066:1
position: 578066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579394-579519:1:exon

position:579394:1
position: 579394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579519:1
position: 579519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:583393-583451:1:exon

position:583393:1
position: 583393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583451:1
position: 583451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:584353-584487:1:exon

position:584353:1
position: 584353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584487:1
position: 584487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:585203-585264:1:exon

position:585203:1
position: 585203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585264:1
position: 585264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:586315-586394:1:exon

position:586315:1
position: 586315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586394:1
position: 586394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:589382-589435:1:exon

position:589382:1
position: 589382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589435:1
position: 589435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:591493-591598:1:exon

position:591493:1
position: 591493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591598:1
position: 591598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:592538-592701:1:exon

position:592538:1
position: 592538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592701:1
position: 592701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:594766-594861:1:exon

position:594766:1
position: 594766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594861:1
position: 594861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:595144-595241:1:exon

position:595144:1
position: 595144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595241:1
position: 595241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:596296-596416:1:exon

position:596296:1
position: 596296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596416:1
position: 596416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:599043-599200:1:exon

position:599043:1
position: 599043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599200:1
position: 599200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:600971-601085:1:exon

position:600971:1
position: 600971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601085:1
position: 601085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:603400-603527:1:exon

position:603400:1
position: 603400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603527:1
position: 603527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:604335-604502:1:exon

position:604335:1
position: 604335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604502:1
position: 604502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:604800-604961:1:exon

position:604800:1
position: 604800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604961:1
position: 604961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:609470-610459:1:exon

position:609470:1
position: 609470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GFPT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GFPT1
product: glutamine--fructose-6-phosphate transaminase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016303600.1
SIO_010081: GFPT1
subclass of: SO_0000673
so part of: GFPT1
location: join(567587..567722,576727..576834,577959..578066,579394..579519,583393..583451,584353..584487,585203..585264,586315..586394,591493..591598,592538..592701,594766..594861,595144..595241,596296..596416,599043..599200,600971..601085,603400..603527,604335..604502,604800..604961,609470..609514)
location: region:567587-609514:1
so has part: feature:567587-567722:1:exon
so has part: feature:576727-576834:1:exon
so has part: feature:577959-578066:1:exon
so has part: feature:579394-579519:1:exon
so has part: feature:583393-583451:1:exon
so has part: feature:584353-584487:1:exon
so has part: feature:585203-585264:1:exon
so has part: feature:586315-586394:1:exon
so has part: feature:591493-591598:1:exon
so has part: feature:592538-592701:1:exon
so has part: feature:594766-594861:1:exon
so has part: feature:595144-595241:1:exon
so has part: feature:596296-596416:1:exon
so has part: feature:599043-599200:1:exon
so has part: feature:600971-601085:1:exon
so has part: feature:603400-603527:1:exon
so has part: feature:604335-604502:1:exon
so has part: feature:604800-604961:1:exon
so has part: feature:609470-609514:1:exon

position:609514:1
position: 609514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567587-567722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576727-576834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577959-578066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579394-579519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583393-583451:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584353-584487:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585203-585264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586315-586394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:591493-591598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:592538-592701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594766-594861:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595144-595241:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596296-596416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:599043-599200:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:600971-601085:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:603400-603527:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:604335-604502:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:604800-604961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:609470-609514:1:exon

GFPT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GFPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X1
translation: MSRLGIFAYLNYHVPRTRREILETLIKGLQRLEYRGYDSAGVGLDGGNDKDWEANACKIHIIKQTGKVKALDEEVHKQQDMDLDIEFDVHLGIAHTRWATHGEPKPVNSHPQRSDKNNEFIVIHNGIITNYKDLQKFLESKGYDFESETDTESIVKLVKYMYDNRDSDDISFSTLVERVIQQLEGAFALVFKSVHYPGQAVGTRRGSPLLIGVRSEHKLSTDHIPILYRSAVPSMDHSFDGISIKMEEGKDKKGSCNLSRVDSTTCLFPVEEKAVEYYFASDASAVIEHTNRVIFLEDDDVAAVVDGRLSIHRVKRTAGDHPGRAVQTLQMELQQIMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADTLMCLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMRGLKGLPDLIKEVLSMDDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQVIARQGRPVVICDKEDIETIKNNKRTIKVPHSVDCLQGILSVIPLQLLAFHLAVLRGYDVDFPRNLAKSVTVE
SIO_010081: GFPT1
subclass of: SO_0000673
so part of: GFPT1
location: join(567710..567722,576727..576834,577959..578066,579394..579519,583393..583451,584353..584487,585203..585264,586315..586394,589382..589435,591493..591598,592538..592701,594766..594861,595144..595241,596296..596416,599043..599200,600971..601085,603400..603527,604335..604502,604800..604961,609470..609514)
location: region:567710-609514:1
so has part: feature:567710-567722:1:exon
so has part: feature:576727-576834:1:exon
so has part: feature:577959-578066:1:exon
so has part: feature:579394-579519:1:exon
so has part: feature:583393-583451:1:exon
so has part: feature:584353-584487:1:exon
so has part: feature:585203-585264:1:exon
so has part: feature:586315-586394:1:exon
so has part: feature:589382-589435:1:exon
so has part: feature:591493-591598:1:exon
so has part: feature:592538-592701:1:exon
so has part: feature:594766-594861:1:exon
so has part: feature:595144-595241:1:exon
so has part: feature:596296-596416:1:exon
so has part: feature:599043-599200:1:exon
so has part: feature:600971-601085:1:exon
so has part: feature:603400-603527:1:exon
so has part: feature:604335-604502:1:exon
so has part: feature:604800-604961:1:exon
so has part: feature:609470-609514:1:exon

XP_005058001.1
type: Protein
SIO_000068: ncbiprotein

position:567710:1
position: 567710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567710-567722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576727-576834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577959-578066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579394-579519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583393-583451:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584353-584487:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585203-585264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586315-586394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:589382-589435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:591493-591598:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:592538-592701:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:594766-594861:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:595144-595241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:596296-596416:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:599043-599200:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:600971-601085:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:603400-603527:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:604335-604502:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:604800-604961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:609470-609514:1:exon

GFPT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GFPT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 isoform X2
translation: MSRLGIFAYLNYHVPRTRREILETLIKGLQRLEYRGYDSAGVGLDGGNDKDWEANACKIHIIKQTGKVKALDEEVHKQQDMDLDIEFDVHLGIAHTRWATHGEPKPVNSHPQRSDKNNEFIVIHNGIITNYKDLQKFLESKGYDFESETDTESIVKLVKYMYDNRDSDDISFSTLVERVIQQLEGAFALVFKSVHYPGQAVGTRRGSPLLIGVRSEHKLSTDHIPILYRSGKDKKGSCNLSRVDSTTCLFPVEEKAVEYYFASDASAVIEHTNRVIFLEDDDVAAVVDGRLSIHRVKRTAGDHPGRAVQTLQMELQQIMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGLKDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFFLSQSGETADTLMCLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFVSLVMFALMMCDDRISMQERRKEIMRGLKGLPDLIKEVLSMDDEIQKLATELYHQKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQNALQQVIARQGRPVVICDKEDIETIKNNKRTIKVPHSVDCLQGILSVIPLQLLAFHLAVLRGYDVDFPRNLAKSVTVE
SIO_010081: GFPT1
subclass of: SO_0000673
so part of: GFPT1
location: join(567710..567722,576727..576834,577959..578066,579394..579519,583393..583451,584353..584487,585203..585264,586315..586394,591493..591598,592538..592701,594766..594861,595144..595241,596296..596416,599043..599200,600971..601085,603400..603527,604335..604502,604800..604961,609470..609514)
location: region:567710-609514:1
so has part: feature:567710-567722:1:exon
so has part: feature:576727-576834:1:exon
so has part: feature:577959-578066:1:exon
so has part: feature:579394-579519:1:exon
so has part: feature:583393-583451:1:exon
so has part: feature:584353-584487:1:exon
so has part: feature:585203-585264:1:exon
so has part: feature:586315-586394:1:exon
so has part: feature:591493-591598:1:exon
so has part: feature:592538-592701:1:exon
so has part: feature:594766-594861:1:exon
so has part: feature:595144-595241:1:exon
so has part: feature:596296-596416:1:exon
so has part: feature:599043-599200:1:exon
so has part: feature:600971-601085:1:exon
so has part: feature:603400-603527:1:exon
so has part: feature:604335-604502:1:exon
so has part: feature:604800-604961:1:exon
so has part: feature:609470-609514:1:exon

XP_016159086.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:567710-567722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576727-576834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577959-578066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579394-579519:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:583393-583451:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584353-584487:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:585203-585264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586315-586394:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:591493-591598:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:592538-592701:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594766-594861:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595144-595241:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:596296-596416:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:599043-599200:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:600971-601085:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:603400-603527:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:604335-604502:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:604800-604961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:609470-609514:1:exon

ANTXR1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ANTXR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(646328..727584)
location: region:646328-727584:-1
so has part: feature:646328-727584:-1:exon
subclass of: SO_0000010

101819707
type: Gene
SIO_000068: ncbigene

position:646328:-1
position: 646328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727584:-1
position: 727584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646328-727584:-1:exon

ANTXR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ANTXR1
product: anthrax toxin receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005057985.1
SIO_010081: ANTXR1
subclass of: SO_0000673
so part of: ANTXR1
location: complement(join(646328..646420,653427..653507,661047..661214,661628..661723,669414..669455,682301..682396,692218..692296,692958..693027,700516..700614,703159..703219,710002..710082,713486..713554,715205..715284,716068..716101,716956..717037,719429..719500,720083..720154,727128..727584))
location: region:646328-727584:-1
so has part: feature:727128-727584:-1:exon
so has part: feature:720083-720154:-1:exon
so has part: feature:719429-719500:-1:exon
so has part: feature:716956-717037:-1:exon
so has part: feature:716068-716101:-1:exon
so has part: feature:715205-715284:-1:exon
so has part: feature:713486-713554:-1:exon
so has part: feature:710002-710082:-1:exon
so has part: feature:703159-703219:-1:exon
so has part: feature:700516-700614:-1:exon
so has part: feature:692958-693027:-1:exon
so has part: feature:692218-692296:-1:exon
so has part: feature:682301-682396:-1:exon
so has part: feature:669414-669455:-1:exon
so has part: feature:661628-661723:-1:exon
so has part: feature:661047-661214:-1:exon
so has part: feature:653427-653507:-1:exon
so has part: feature:646328-646420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:727128-727584:-1:exon

position:727128:-1
position: 727128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720083-720154:-1:exon

position:720083:-1
position: 720083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720154:-1
position: 720154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:719429-719500:-1:exon

position:719429:-1
position: 719429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719500:-1
position: 719500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:716956-717037:-1:exon

position:716956:-1
position: 716956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717037:-1
position: 717037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:716068-716101:-1:exon

position:716068:-1
position: 716068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716101:-1
position: 716101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:715205-715284:-1:exon

position:715205:-1
position: 715205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715284:-1
position: 715284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:713486-713554:-1:exon

position:713486:-1
position: 713486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713554:-1
position: 713554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:710002-710082:-1:exon

position:710002:-1
position: 710002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710082:-1
position: 710082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:703159-703219:-1:exon

position:703159:-1
position: 703159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703219:-1
position: 703219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:700516-700614:-1:exon

position:700516:-1
position: 700516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700614:-1
position: 700614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:692958-693027:-1:exon

position:692958:-1
position: 692958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693027:-1
position: 693027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:692218-692296:-1:exon

position:692218:-1
position: 692218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692296:-1
position: 692296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:682301-682396:-1:exon

position:682301:-1
position: 682301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682396:-1
position: 682396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:669414-669455:-1:exon

position:669414:-1
position: 669414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669455:-1
position: 669455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:661628-661723:-1:exon

position:661628:-1
position: 661628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661723:-1
position: 661723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:661047-661214:-1:exon

position:661047:-1
position: 661047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661214:-1
position: 661214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:653427-653507:-1:exon

position:653427:-1
position: 653427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653507:-1
position: 653507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:646328-646420:-1:exon

position:646420:-1
position: 646420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANTXR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ANTXR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anthrax toxin receptor 1
translation: MAIANQSILRFGFKCVFLAVFTLTCDGHGGKRENGGPACYGGFDLYFILDKSGSVLHHWNEIYHFVEHLARKFISPQLRMSFIVFSTRGTILMRLTEDREQIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENVHGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGATVYCVGVKDFNETQLARIADSKDHVFPVNDGFEALQGIIDSILKKSCIEILAAEPSSICAGESFQVVVRGNGFRHARNVDRVLCSFRINDTVTLNEKPFVVEDTYLLCPAPVLREVGMEAALQVSMNDGLSFISSSVIISSTHCSDGSILAIALLILFLLLALALLWWFWPLCCTVIIKEPPPPPAEDSEEEDDDGLPKKKWPTVDASYYGGRGVGGIKRMEVRWGEKGSTEEGAKLEKAKNARVKMPEQEYEFPEPRNLGSSMRRPSSPRKWYSPIKGKLDALWVLLRKGYDRVSVMRPQPGDKSDRSPPRGAVGFPISSEAVQLPKPMPAHLD
SIO_010081: ANTXR1
subclass of: SO_0000673
so part of: ANTXR1
location: complement(join(646328..646420,653427..653507,661047..661214,661628..661723,669414..669455,682301..682396,692218..692296,692958..693027,700516..700614,703159..703219,710002..710082,713486..713554,715205..715284,716068..716101,716956..717037,719429..719500,720083..720154,727128..727279))
location: region:646328-727279:-1
so has part: feature:727128-727279:-1:exon
so has part: feature:720083-720154:-1:exon
so has part: feature:719429-719500:-1:exon
so has part: feature:716956-717037:-1:exon
so has part: feature:716068-716101:-1:exon
so has part: feature:715205-715284:-1:exon
so has part: feature:713486-713554:-1:exon
so has part: feature:710002-710082:-1:exon
so has part: feature:703159-703219:-1:exon
so has part: feature:700516-700614:-1:exon
so has part: feature:692958-693027:-1:exon
so has part: feature:692218-692296:-1:exon
so has part: feature:682301-682396:-1:exon
so has part: feature:669414-669455:-1:exon
so has part: feature:661628-661723:-1:exon
so has part: feature:661047-661214:-1:exon
so has part: feature:653427-653507:-1:exon
so has part: feature:646328-646420:-1:exon

XP_005058042.1
type: Protein
SIO_000068: ncbiprotein

position:727279:-1
position: 727279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:727128-727279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720083-720154:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:719429-719500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716956-717037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:716068-716101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:715205-715284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:713486-713554:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:710002-710082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:703159-703219:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:700516-700614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:692958-693027:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:692218-692296:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:682301-682396:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:669414-669455:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:661628-661723:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:661047-661214:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:653427-653507:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:646328-646420:-1:exon

GKN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GKN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(730815..736613)
location: region:730815-736613:-1
so has part: feature:730815-736613:-1:exon
subclass of: SO_0000010

101819905
type: Gene
SIO_000068: ncbigene

position:730815:-1
position: 730815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736613:-1
position: 736613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730815-736613:-1:exon

GKN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GKN1
product: gastrokine 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303599.1
SIO_010081: GKN1
subclass of: SO_0000673
so part of: GKN1
location: complement(join(730815..731049,732321..732462,732815..732925,733080..733220,733365..733418,736574..736613))
location: region:730815-736613:-1
so has part: feature:736574-736613:-1:exon
so has part: feature:733365-733418:-1:exon
so has part: feature:733080-733220:-1:exon
so has part: feature:732815-732925:-1:exon
so has part: feature:732321-732462:-1:exon
so has part: feature:730815-731049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:736574-736613:-1:exon

position:736574:-1
position: 736574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:733365-733418:-1:exon

position:733365:-1
position: 733365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733418:-1
position: 733418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:733080-733220:-1:exon

position:733080:-1
position: 733080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733220:-1
position: 733220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:732815-732925:-1:exon

position:732815:-1
position: 732815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732925:-1
position: 732925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:732321-732462:-1:exon

position:732321:-1
position: 732321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732462:-1
position: 732462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:730815-731049:-1:exon

position:731049:-1
position: 731049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GKN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GKN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrokine-1
translation: MKFPILTAVLLGLVLTPALADHHQQTEVSKKISFGGGYQLMTINRKWLVASIEQKTNHGSWKTIWNYDTGFMATKVLPEKVCYLSIMNRTEMPSFDALPQLAADIRNHNRPRPPSKEITFTLVKRTIRDLESYGPDTFSMCRGLSTYVAYEVHGPQFSLGSCIKLDVLQYLALTYCHNDNFV
SIO_010081: GKN1
subclass of: SO_0000673
so part of: GKN1
location: complement(join(730961..731049,732321..732462,732815..732925,733080..733220,733365..733418,736574..736585))
location: region:730961-736585:-1
so has part: feature:736574-736585:-1:exon
so has part: feature:733365-733418:-1:exon
so has part: feature:733080-733220:-1:exon
so has part: feature:732815-732925:-1:exon
so has part: feature:732321-732462:-1:exon
so has part: feature:730961-731049:-1:exon

XP_016159085.1
type: Protein
SIO_000068: ncbiprotein

position:730961:-1
position: 730961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736585:-1
position: 736585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736574-736585:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:733365-733418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733080-733220:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:732815-732925:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:732321-732462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:730961-731049:-1:exon

LOC101820095
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101820095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(738398..761123)
location: region:738398-761123:-1
so has part: feature:738398-761123:-1:exon
subclass of: SO_0000010

101820095
type: Gene
SIO_000068: ncbigene

position:738398:-1
position: 738398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761123:-1
position: 761123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738398-761123:-1:exon

LOC101820095
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101820095
product: gastrokine-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016303541.1
SIO_010081: LOC101820095
subclass of: SO_0000673
so part of: LOC101820095
location: complement(join(738398..738589,739517..739627,739843..739983,754151..754233,759916..760054,761061..761123))
location: region:738398-761123:-1
so has part: feature:761061-761123:-1:exon
so has part: feature:759916-760054:-1:exon
so has part: feature:754151-754233:-1:exon
so has part: feature:739843-739983:-1:exon
so has part: feature:739517-739627:-1:exon
so has part: feature:738398-738589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:761061-761123:-1:exon

position:761061:-1
position: 761061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:759916-760054:-1:exon

position:759916:-1
position: 759916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760054:-1
position: 760054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:754151-754233:-1:exon

position:754151:-1
position: 754151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754233:-1
position: 754233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:739843-739983:-1:exon

position:739843:-1
position: 739843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739983:-1
position: 739983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:739517-739627:-1:exon

position:739517:-1
position: 739517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739627:-1
position: 739627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:738398-738589:-1:exon

position:738589:-1
position: 738589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101820095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101820095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrokine-1-like
translation: MNRNEMPSFENLAKLASQNRNLLGLGRPNKGITFVTNGLVNNLTPYGIDITAMCSGLTTYMAYEVHGPQVNLGSCVTLDVLRVVDLKYCTGNGQSQQTNHNCHFSGGCIYQNMTVSSQTHVAIFEQRSNQFSWKTIWDYNTGIIATKVVQERTCYISTMNRNVVPSFDALVIYASENRNQVGFGRPTKKITFVTSGLVNNLRNYGIDITAMCSGLTTYMAYEVHGECKHGNSQCYGNSLSK
SIO_010081: LOC101820095
subclass of: SO_0000673
so part of: LOC101820095
location: complement(join(738398..738589,739517..739627,739843..739983,754151..754233,759916..760054,761061..761120))
location: region:738398-761120:-1
so has part: feature:761061-761120:-1:exon
so has part: feature:759916-760054:-1:exon
so has part: feature:754151-754233:-1:exon
so has part: feature:739843-739983:-1:exon
so has part: feature:739517-739627:-1:exon
so has part: feature:738398-738589:-1:exon

XP_016159027.1
type: Protein
SIO_000068: ncbiprotein

position:761120:-1
position: 761120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761061-761120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759916-760054:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754151-754233:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:739843-739983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:739517-739627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738398-738589:-1:exon

LOC107604135
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(776621..779676)
location: region:776621-779676:-1
so has part: feature:776621-779676:-1:exon
subclass of: SO_0000010

107604135
type: Gene
SIO_000068: ncbigene

position:776621:-1
position: 776621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779676:-1
position: 779676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:776621-779676:-1:exon

LOC107604135
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604135
product: gastrokine-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_016303542.1
SIO_010081: LOC107604135
subclass of: SO_0000673
so part of: LOC107604135
location: complement(join(776621..776709,777245..777383,778304..778414,778635..778724,779605..779676))
location: region:776621-779676:-1
so has part: feature:779605-779676:-1:exon
so has part: feature:778635-778724:-1:exon
so has part: feature:778304-778414:-1:exon
so has part: feature:777245-777383:-1:exon
so has part: feature:776621-776709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779605-779676:-1:exon

position:779605:-1
position: 779605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778635-778724:-1:exon

position:778635:-1
position: 778635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778724:-1
position: 778724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:778304-778414:-1:exon

position:778304:-1
position: 778304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778414:-1
position: 778414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777245-777383:-1:exon

position:777245:-1
position: 777245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777383:-1
position: 777383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:776621-776709:-1:exon

position:776709:-1
position: 776709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107604135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604135
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrokine-1-like
translation: MAVGMAVTIGMVVGMVVGMVVGTTSMSINSQTQTAIFEQKSNRLSWKTIWNYNTGVIATKVMQERTCYISTMNRSEMPSFAALIKVAAERRNQIGFGRPNKMITFVTNGLVNNLMSYGANVFSMCSGLTTYMAHEVYGPQYNQQSCTALNVVRLVELKYCRGNGYI
SIO_010081: LOC107604135
subclass of: SO_0000673
so part of: LOC107604135
location: complement(join(776621..776709,777245..777383,778304..778414,778635..778724,779605..779676))
location: region:776621-779676:-1
so has part: feature:779605-779676:-1:exon
so has part: feature:778635-778724:-1:exon
so has part: feature:778304-778414:-1:exon
so has part: feature:777245-777383:-1:exon
so has part: feature:776621-776709:-1:exon

XP_016159028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:779605-779676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778635-778724:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:778304-778414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777245-777383:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776621-776709:-1:exon

GKN2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GKN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 819549..822852
location: region:819549-822852:1
so has part: feature:819549-822852:1:exon
subclass of: SO_0000010

101811996
type: Gene
SIO_000068: ncbigene

position:819549:1
position: 819549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822852:1
position: 822852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819549-822852:1:exon

GKN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GKN2
product: gastrokine 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005057945.1
SIO_010081: GKN2
subclass of: SO_0000673
so part of: GKN2
location: join(819549..819593,820140..820193,820677..820808,821289..821399,822179..822332,822644..822852)
location: region:819549-822852:1
so has part: feature:819549-819593:1:exon
so has part: feature:820140-820193:1:exon
so has part: feature:820677-820808:1:exon
so has part: feature:821289-821399:1:exon
so has part: feature:822179-822332:1:exon
so has part: feature:822644-822852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:819549-819593:1:exon

position:819593:1
position: 819593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820140-820193:1:exon

position:820140:1
position: 820140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820193:1
position: 820193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:820677-820808:1:exon

position:820677:1
position: 820677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820808:1
position: 820808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:821289-821399:1:exon

position:821289:1
position: 821289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821399:1
position: 821399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:822179-822332:1:exon

position:822179:1
position: 822179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822332:1
position: 822332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:822644-822852:1:exon

position:822644:1
position: 822644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GKN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GKN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrokine-2
translation: MKRFTAVLICLGVFWAQTSALNTFVLRDPVSNYVTGTMTIHNEEHIVDVHVRSGVYSSDTIFDYTHGYIATRLFSRNACFIMKIKKEFIPELREIGHLAFERETMKDVYSPNNVWAQFQPGNSRLGNFKDWILYGKHIENLCTGLPLYQLVATEPTMNVDGCASAGIPSILGLKICQELIATGS
SIO_010081: GKN2
subclass of: SO_0000673
so part of: GKN2
location: join(819582..819593,820140..820193,820677..820808,821289..821399,822179..822332,822644..822735)
location: region:819582-822735:1
so has part: feature:819582-819593:1:exon
so has part: feature:820140-820193:1:exon
so has part: feature:820677-820808:1:exon
so has part: feature:821289-821399:1:exon
so has part: feature:822179-822332:1:exon
so has part: feature:822644-822735:1:exon

XP_005058002.1
type: Protein
SIO_000068: ncbiprotein

position:819582:1
position: 819582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822735:1
position: 822735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819582-819593:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820140-820193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820677-820808:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:821289-821399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822179-822332:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:822644-822735:1:exon

BMP10
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BMP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 836571..845349
location: region:836571-845349:1
so has part: feature:836571-845349:1:exon
subclass of: SO_0000010

101812197
type: Gene
SIO_000068: ncbigene

position:836571:1
position: 836571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845349:1
position: 845349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836571-845349:1:exon

BMP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BMP10
product: bone morphogenetic protein 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005057947.1
SIO_010081: BMP10
subclass of: SO_0000673
so part of: BMP10
location: join(836571..836980,842744..845349)
location: region:836571-845349:1
so has part: feature:836571-836980:1:exon
so has part: feature:842744-845349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:836571-836980:1:exon

position:836980:1
position: 836980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842744-845349:1:exon

position:842744:1
position: 842744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BMP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BMP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone morphogenetic protein 10 isoform X2
translation: MDSVLLQLWAVLSLLVHLAACSPILSLEHSSLEEDVPLFDEILSEQDGVDFNTLLQNMKNEFLKTLNLSDIPLHESAKVDPPEYMLELYNRFATDRTSMPSANIIRSFKNEDLDSHPVGVPGTRKYPLLFNVSIPHHEEITMAELRLYTLVERDQRLYEGLDRKVTIFEVLDNIHMGAGEERKLVALASRHIYGTSSEWESFEVTEAIRRWRRAGLTTHRLEVHIESREGHEQNGEGKLDIDINSEAKHVPLLVVYSDDQSNDRKEEKEELNEMIDHEQLLELENLEVGNFHDQPGEEALLQMRSNIIYDSTARIRRNAKGNYCKKTPLYIDFKEIGWDSWIIAPAGYEAYECHGVCAYPLTEHVTPTKHAIVKTLVHLKNPQKASKACCVPTKLDPISILYLDAGVVTYKFKYEGMVVSECGCR
SIO_010081: BMP10
subclass of: SO_0000673
so part of: BMP10
location: join(836647..836980,842744..843687)
location: region:836647-843687:1
so has part: feature:836647-836980:1:exon
so has part: feature:842744-843687:1:exon

XP_005058004.1
type: Protein
SIO_000068: ncbiprotein

position:836647:1
position: 836647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843687:1
position: 843687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836647-836980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842744-843687:1:exon

BMP10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BMP10
product: bone morphogenetic protein 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005057946.1
SIO_010081: BMP10
subclass of: SO_0000673
so part of: BMP10
location: join(838065..838801,842744..845349)
location: region:838065-845349:1
so has part: feature:838065-838801:1:exon
so has part: feature:842744-845349:1:exon

position:838065:1
position: 838065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838065-838801:1:exon

position:838801:1
position: 838801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842744-845349:1:exon

BMP10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BMP10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bone morphogenetic protein 10 isoform X1
translation: MDSVLLQLWAVLSLLVHLAACSPILSLEHSSLEEDVPLFDEILSEQDGVDFNTLLQNMKNEFLKTLNLSDIPLHESAKVDPPEYMLELYNRFATDRTSMPSANIIRSFKNEDLDSHPVGVPGTRKYPLLFNVSIPHHEEITMAELRLYTLVERDQRLYEGLDRKVTIFEVLDNIHMGAGEERKLVALASRHIYGTSSEWESFEVTEAIRRWRRAGLTTHRLEVHIESREGHEQNGEGKLDIDINSEAKHVPLLVVYSDDQSNDRKEEKEELNEMIDHEQLLELENLEVGNFHDQPGEEALLQMRSNIIYDSTARIRRNAKGNYCKKTPLYIDFKEIGWDSWIIAPAGYEAYECHGVCAYPLTEHVTPTKHAIVKTLVHLKNPQKASKACCVPTKLDPISILYLDAGVVTYKFKYEGMVVSECGCR
SIO_010081: BMP10
subclass of: SO_0000673
so part of: BMP10
location: join(838468..838801,842744..843687)
location: region:838468-843687:1
so has part: feature:838468-838801:1:exon
so has part: feature:842744-843687:1:exon

XP_005058003.1
type: Protein
SIO_000068: ncbiprotein

position:838468:1
position: 838468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838468-838801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:842744-843687:1:exon

ARHGAP25
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ARHGAP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(860275..884457)
location: region:860275-884457:-1
so has part: feature:860275-884457:-1:exon
subclass of: SO_0000010

101812530
type: Gene
SIO_000068: ncbigene

position:860275:-1
position: 860275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884457:-1
position: 884457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:860275-884457:-1:exon

ARHGAP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARHGAP25
product: Rho GTPase activating protein 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016303642.1
SIO_010081: ARHGAP25
subclass of: SO_0000673
so part of: ARHGAP25
location: complement(join(860275..861003,862845..863413,863864..864054,864567..864688,865247..865320,868454..868586,874183..874387,876922..877041,878034..878121,880558..880745,884313..884457))
location: region:860275-884457:-1
so has part: feature:884313-884457:-1:exon
so has part: feature:880558-880745:-1:exon
so has part: feature:878034-878121:-1:exon
so has part: feature:876922-877041:-1:exon
so has part: feature:874183-874387:-1:exon
so has part: feature:868454-868586:-1:exon
so has part: feature:865247-865320:-1:exon
so has part: feature:864567-864688:-1:exon
so has part: feature:863864-864054:-1:exon
so has part: feature:862845-863413:-1:exon
so has part: feature:860275-861003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:884313-884457:-1:exon

position:884313:-1
position: 884313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880558-880745:-1:exon

position:880558:-1
position: 880558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:880745:-1
position: 880745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:878034-878121:-1:exon

position:878034:-1
position: 878034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878121:-1
position: 878121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:876922-877041:-1:exon

position:876922:-1
position: 876922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877041:-1
position: 877041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:874183-874387:-1:exon

position:874183:-1
position: 874183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874387:-1
position: 874387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:868454-868586:-1:exon

position:868454:-1
position: 868454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868586:-1
position: 868586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:865247-865320:-1:exon

position:865247:-1
position: 865247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865320:-1
position: 865320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:864567-864688:-1:exon

position:864567:-1
position: 864567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864688:-1
position: 864688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:863864-864054:-1:exon

position:863864:-1
position: 863864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864054:-1
position: 864054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:862845-863413:-1:exon

position:862845:-1
position: 862845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863413:-1
position: 863413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:860275-861003:-1:exon

position:861003:-1
position: 861003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARHGAP25
product: Rho GTPase activating protein 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005057948.1
SIO_010081: ARHGAP25
subclass of: SO_0000673
so part of: ARHGAP25
location: complement(join(860275..861003,862845..863413,863864..864054,864567..864688,865247..865320,868454..868586,874183..874390,876922..877041,878034..878121,880558..880745,884313..884457))
location: region:860275-884457:-1
so has part: feature:884313-884457:-1:exon
so has part: feature:880558-880745:-1:exon
so has part: feature:878034-878121:-1:exon
so has part: feature:876922-877041:-1:exon
so has part: feature:874183-874390:-1:exon
so has part: feature:868454-868586:-1:exon
so has part: feature:865247-865320:-1:exon
so has part: feature:864567-864688:-1:exon
so has part: feature:863864-864054:-1:exon
so has part: feature:862845-863413:-1:exon
so has part: feature:860275-861003:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:884313-884457:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880558-880745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878034-878121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876922-877041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874183-874390:-1:exon

position:874390:-1
position: 874390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:868454-868586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865247-865320:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864567-864688:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:863864-864054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:862845-863413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:860275-861003:-1:exon

ARHGAP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARHGAP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 25 isoform X2
translation: MSLKLPRNWDFNLKMDAAKIARSRSVMSADPGSQPCPAPGPRPLKLGWLRKQRSIVKNWQLRFFVLQGQRLLYYKDEDDAKPQGCLSLQGSTIKVVATNPEEGGKFIFEIVPGLAGEPGRAGQDPCVLMASSQAEMEEWVKSIRRALGAAAGVFGQPLADTVAHEQKLGQPQVPVLVQKSAEFIREHGVAEEGIFRLPGQDNLVRRLRDAFDAGERPSFPRDTDVHTVASLFKLYLRELPEPVVPWLQYEDFLLCGQALEADETKGHQELLKQLSLLPRDNYNLLSYICRFLYEIQLNSSVNKMSVDNLATVIGVNLIRPRIEDPAIIMRGTPQVQKVMTVLISDHEKLFPPSKDVPPSPPAPDEKKAPVPRSSVGWGAAEEPTAPRASSQRQMRDHPNSSSSPGPAATSSVPGEDTEPRDTQGTWKTQARQRTQTLPTRRSFLAAAPGERGSKERSDVLASDFWKGSARPLPSEGHKRTLSHDLFKLLDLHRASAFDSGPSCQAESGEGSGSSPSPASSISEKEFLPCFSPGQEPREAASATSSPAEEPSPEQESRELLQSTILKLEKDMEAQRNDYEGQIKSLQEENYEAWAKVVRLSQEMEQEKKKCGELELRLENAERLREELEKKNKMLEEELKNLTKPTSKTGAKTN
SIO_010081: ARHGAP25
subclass of: SO_0000673
so part of: ARHGAP25
location: complement(join(860793..861003,862845..863413,863864..864054,864567..864688,865247..865320,868454..868586,874183..874387,876922..877041,878034..878121,880558..880745,884313..884373))
location: region:860793-884373:-1
so has part: feature:884313-884373:-1:exon
so has part: feature:880558-880745:-1:exon
so has part: feature:878034-878121:-1:exon
so has part: feature:876922-877041:-1:exon
so has part: feature:874183-874387:-1:exon
so has part: feature:868454-868586:-1:exon
so has part: feature:865247-865320:-1:exon
so has part: feature:864567-864688:-1:exon
so has part: feature:863864-864054:-1:exon
so has part: feature:862845-863413:-1:exon
so has part: feature:860793-861003:-1:exon

XP_016159128.1
type: Protein
SIO_000068: ncbiprotein

position:860793:-1
position: 860793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884373:-1
position: 884373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884313-884373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880558-880745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878034-878121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876922-877041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874183-874387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:868454-868586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865247-865320:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864567-864688:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:863864-864054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:862845-863413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:860793-861003:-1:exon

ARHGAP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARHGAP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 25 isoform X1
translation: MSLKLPRNWDFNLKMDAAKIARSRSVMSADPGSQPCPAPGPRPLKLGWLRKQRSIVKNWQLRFFVLQGQRLLYYKDEDDAKPQGCLSLQGSTIKVVATNPEEGGKFIFEIVPGLAGEPGRAGQDPCVLMASSQAEMEEWVKSIRRALGAAAGAVFGQPLADTVAHEQKLGQPQVPVLVQKSAEFIREHGVAEEGIFRLPGQDNLVRRLRDAFDAGERPSFPRDTDVHTVASLFKLYLRELPEPVVPWLQYEDFLLCGQALEADETKGHQELLKQLSLLPRDNYNLLSYICRFLYEIQLNSSVNKMSVDNLATVIGVNLIRPRIEDPAIIMRGTPQVQKVMTVLISDHEKLFPPSKDVPPSPPAPDEKKAPVPRSSVGWGAAEEPTAPRASSQRQMRDHPNSSSSPGPAATSSVPGEDTEPRDTQGTWKTQARQRTQTLPTRRSFLAAAPGERGSKERSDVLASDFWKGSARPLPSEGHKRTLSHDLFKLLDLHRASAFDSGPSCQAESGEGSGSSPSPASSISEKEFLPCFSPGQEPREAASATSSPAEEPSPEQESRELLQSTILKLEKDMEAQRNDYEGQIKSLQEENYEAWAKVVRLSQEMEQEKKKCGELELRLENAERLREELEKKNKMLEEELKNLTKPTSKTGAKTN
SIO_010081: ARHGAP25
subclass of: SO_0000673
so part of: ARHGAP25
location: complement(join(860793..861003,862845..863413,863864..864054,864567..864688,865247..865320,868454..868586,874183..874390,876922..877041,878034..878121,880558..880745,884313..884373))
location: region:860793-884373:-1
so has part: feature:884313-884373:-1:exon
so has part: feature:880558-880745:-1:exon
so has part: feature:878034-878121:-1:exon
so has part: feature:876922-877041:-1:exon
so has part: feature:874183-874390:-1:exon
so has part: feature:868454-868586:-1:exon
so has part: feature:865247-865320:-1:exon
so has part: feature:864567-864688:-1:exon
so has part: feature:863864-864054:-1:exon
so has part: feature:862845-863413:-1:exon
so has part: feature:860793-861003:-1:exon

XP_005058005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:884313-884373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880558-880745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878034-878121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:876922-877041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:874183-874390:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:868454-868586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:865247-865320:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:864567-864688:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:863864-864054:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:862845-863413:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:860793-861003:-1:exon

LOC101812726
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 892377..893552
location: region:892377-893552:1
so has part: feature:892377-893552:1:exon
subclass of: SO_0000011

101812726
type: Gene
SIO_000068: ncbigene

position:892377:1
position: 892377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893552:1
position: 893552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892377-893552:1:exon

LOC101812726
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101812726
product: uncharacterized LOC101812726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_219294.2
SIO_010081: LOC101812726
subclass of: SO_0000673
so part of: LOC101812726
location: join(892377..893276,893333..893552)
location: region:892377-893552:1
so has part: feature:892377-893276:1:exon
so has part: feature:893333-893552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:892377-893276:1:exon

position:893276:1
position: 893276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:893333-893552:1:exon

position:893333:1
position: 893333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDS2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CDS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(894749..916379)
location: region:894749-916379:-1
so has part: feature:894749-916379:-1:exon
subclass of: SO_0000010

101820305
type: Gene
SIO_000068: ncbigene

position:894749:-1
position: 894749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916379:-1
position: 916379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894749-916379:-1:exon

CDS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CDS2
product: CDP-diacylglycerol synthase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303543.1
SIO_010081: CDS2
subclass of: SO_0000673
so part of: CDS2
location: complement(join(894749..895014,895517..895620,896111..896230,896466..896618,897476..897544,897879..897966,898861..898943,899779..899837,900182..900321,902503..902600,903364..903460,904797..904939,906209..906247,916239..916379))
location: region:894749-916379:-1
so has part: feature:916239-916379:-1:exon
so has part: feature:906209-906247:-1:exon
so has part: feature:904797-904939:-1:exon
so has part: feature:903364-903460:-1:exon
so has part: feature:902503-902600:-1:exon
so has part: feature:900182-900321:-1:exon
so has part: feature:899779-899837:-1:exon
so has part: feature:898861-898943:-1:exon
so has part: feature:897879-897966:-1:exon
so has part: feature:897476-897544:-1:exon
so has part: feature:896466-896618:-1:exon
so has part: feature:896111-896230:-1:exon
so has part: feature:895517-895620:-1:exon
so has part: feature:894749-895014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:916239-916379:-1:exon

position:916239:-1
position: 916239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:906209-906247:-1:exon

position:906209:-1
position: 906209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906247:-1
position: 906247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:904797-904939:-1:exon

position:904797:-1
position: 904797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904939:-1
position: 904939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:903364-903460:-1:exon

position:903364:-1
position: 903364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903460:-1
position: 903460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:902503-902600:-1:exon

position:902503:-1
position: 902503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902600:-1
position: 902600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:900182-900321:-1:exon

position:900182:-1
position: 900182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900321:-1
position: 900321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:899779-899837:-1:exon

position:899779:-1
position: 899779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899837:-1
position: 899837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:898861-898943:-1:exon

position:898861:-1
position: 898861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898943:-1
position: 898943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:897879-897966:-1:exon

position:897879:-1
position: 897879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897966:-1
position: 897966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:897476-897544:-1:exon

position:897476:-1
position: 897476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897544:-1
position: 897544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:896466-896618:-1:exon

position:896466:-1
position: 896466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896618:-1
position: 896618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:896111-896230:-1:exon

position:896111:-1
position: 896111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896230:-1
position: 896230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:895517-895620:-1:exon

position:895517:-1
position: 895517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition