Ficedula albicollis isolate OC2 chromosome 20, FicAlb1.5, whole genome shotgun sequence.
type: Entry
definition: Ficedula albicollis isolate OC2 chromosome 20, FicAlb1.5, whole genome shotgun sequence.
sequence version: NC_021691.1
sequence date: 2016-04-20
sequence: sequence
division: CON
label: NC_021691.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA208061
dblink: SAMN02981387
keyword: WGS
keyword: RefSeq
source: Ficedula albicollis (collared flycatcher)
organism: Ficedula albicollis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
reference: 1
references: 23103876
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002008.1.\nAssembly name: FicAlb1.5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Uppsala University on 2013/06/24.\nThe original whole-genome shotgun project has the accession\nAGTO00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: FicAlb1.5\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina GAII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Ficedula albicollis Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 15675940
topology: linear
so has quality: SO_0000987
location: 1..15675940
location: region:1-15675940:1
RO_0002162: 59894

NC_021691
type: RefSeq
SIO_000068: refseq

PRJNA208061
type: BioProject
SIO_000068: bioproject

SAMN02981387
type: BioSample
SIO_000068: biosample

1
title: The genomic landscape of species divergence in Ficedula flycatchers
author: Ellegren, H.
author: Smeds, L.
author: Burri, R.
author: Olason, P.I.
author: Backstrom, N.
author: Kawakami, T.
author: Kunstner, A.
author: Makinen, H.
author: Nadachowska-Brzyska, K.
author: Qvarnstrom, A.
author: Uebbing, S.
author: Wolf, J.B.
journal: Nature
volume: 491
issue: 7426
pages: 756-760
year: 2012
pubmed: 23103876

23103876
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15675940:1
position: 15675940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-15675940:1:source
so part of: sequence
organism: Ficedula albicollis
mol type: genomic DNA
isolate: OC2
chromosome: 20
sex: male
country: Sweden: Oland
collection date: 2009

59894
type: Taxonomy
SIO_000068: taxonomy

LOC101811929
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101811929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9666..10545
location: region:9666-10545:1
so has part: feature:9666-10545:1:exon
subclass of: SO_0000011

101811929
type: Gene
SIO_000068: ncbigene

position:9666:1
position: 9666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10545:1
position: 10545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9666-10545:1:exon

LOC101811929
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101811929
product: uncharacterized LOC101811929
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_219234.1
SIO_010081: LOC101811929
subclass of: SO_0000673
so part of: LOC101811929
location: join(9666..9967,10224..10545)
location: region:9666-10545:1
so has part: feature:9666-9967:1:exon
so has part: feature:10224-10545:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9666-9967:1:exon

position:9967:1
position: 9967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10224-10545:1:exon

position:10224:1
position: 10224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101811798
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101811798
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10853..12368)
location: region:10853-12368:-1
so has part: feature:10853-12368:-1:exon
subclass of: SO_0000011

101811798
type: Gene
SIO_000068: ncbigene

position:10853:-1
position: 10853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12368:-1
position: 12368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10853-12368:-1:exon

LOC101811798
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101811798
product: uncharacterized LOC101811798, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_219233.1
SIO_010081: LOC101811798
subclass of: SO_0000673
so part of: LOC101811798
location: complement(join(10853..11633,11749..11961,12169..12368))
location: region:10853-12368:-1
so has part: feature:12169-12368:-1:exon
so has part: feature:11749-11961:-1:exon
so has part: feature:10853-11633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12169-12368:-1:exon

position:12169:-1
position: 12169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11749-11961:-1:exon

position:11749:-1
position: 11749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11961:-1
position: 11961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10853-11633:-1:exon

position:11633:-1
position: 11633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101811798
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101811798
product: uncharacterized LOC101811798, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_001611925.1
SIO_010081: LOC101811798
subclass of: SO_0000673
so part of: LOC101811798
location: complement(join(10853..11633,11749..12368))
location: region:10853-12368:-1
so has part: feature:11749-12368:-1:exon
so has part: feature:10853-11633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11749-12368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10853-11633:-1:exon

MMP24
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MMP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12576..57942
location: region:12576-57942:1
so has part: feature:12576-57942:1:exon
subclass of: SO_0000010

101811478
type: Gene
SIO_000068: ncbigene

position:12576:1
position: 12576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57942:1
position: 57942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12576-57942:1:exon

MMP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MMP24
product: matrix metallopeptidase 24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005056922.1
SIO_010081: MMP24
subclass of: SO_0000673
so part of: MMP24
location: join(12576..12649,15018..15166,23131..23247,25234..25538,40599..40760,51379..51593,52893..53031,53926..54192,55456..57942)
location: region:12576-57942:1
so has part: feature:12576-12649:1:exon
so has part: feature:15018-15166:1:exon
so has part: feature:23131-23247:1:exon
so has part: feature:25234-25538:1:exon
so has part: feature:40599-40760:1:exon
so has part: feature:51379-51593:1:exon
so has part: feature:52893-53031:1:exon
so has part: feature:53926-54192:1:exon
so has part: feature:55456-57942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12576-12649:1:exon

position:12649:1
position: 12649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15018-15166:1:exon

position:15018:1
position: 15018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15166:1
position: 15166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23131-23247:1:exon

position:23131:1
position: 23131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23247:1
position: 23247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:25234-25538:1:exon

position:25234:1
position: 25234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25538:1
position: 25538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:40599-40760:1:exon

position:40599:1
position: 40599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40760:1
position: 40760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51379-51593:1:exon

position:51379:1
position: 51379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51593:1
position: 51593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:52893-53031:1:exon

position:52893:1
position: 52893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53031:1
position: 53031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:53926-54192:1:exon

position:53926:1
position: 53926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54192:1
position: 54192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:55456-57942:1:exon

position:55456:1
position: 55456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MMP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MMP24
product: matrix metallopeptidase 24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005056923.1
SIO_010081: MMP24
subclass of: SO_0000673
so part of: MMP24
location: join(12679..12729,15018..15166,23131..23247,25234..25538,40599..40760,51379..51593,52893..53031,53926..54192,55456..57942)
location: region:12679-57942:1
so has part: feature:12679-12729:1:exon
so has part: feature:15018-15166:1:exon
so has part: feature:23131-23247:1:exon
so has part: feature:25234-25538:1:exon
so has part: feature:40599-40760:1:exon
so has part: feature:51379-51593:1:exon
so has part: feature:52893-53031:1:exon
so has part: feature:53926-54192:1:exon
so has part: feature:55456-57942:1:exon

position:12679:1
position: 12679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12679-12729:1:exon

position:12729:1
position: 12729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15018-15166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23131-23247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:25234-25538:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:40599-40760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51379-51593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:52893-53031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:53926-54192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:55456-57942:1:exon

MMP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MMP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrix metalloproteinase-24
translation: MSPFQSGKAVQSAVATMQQFYGIPVTGVLDQTTIEWMKKPRCGVPDHPHLRRSRRKKRYALTGQKWRQKHITYSVHNYTPKVGEIDTRRAIRQAFDVWQRVTPLTFEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNSNHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIYGPPIEPLEPTRPLPTLPVRRIHSTSERKHERQPRPPSPPLGDRPALPGSKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPAKIDAAYERSDGKFVFFKGDKYWVFKEVTAEPGYPHSLVELGSCLPREGIDTALRWEPVGKTYFFKGDRYWRYNEDKRATDPGYPKPITVWRGVPQAPQGAFISKEGFYTYFYKGKEYWKFDNQRLSVEPGYPRSILKDWMGCNQKDVERSKDRRLPHDDVDIMVTINDMPSTVNAIAVVIPCILSLCILVLVYTIFQFKNKEVQQNVVYYKRPVQEWV
SIO_010081: MMP24
subclass of: SO_0000673
so part of: MMP24
location: join(15063..15166,23131..23247,25234..25538,40599..40760,51379..51593,52893..53031,53926..54192,55456..55793)
location: region:15063-55793:1
so has part: feature:15063-15166:1:exon
so has part: feature:23131-23247:1:exon
so has part: feature:25234-25538:1:exon
so has part: feature:40599-40760:1:exon
so has part: feature:51379-51593:1:exon
so has part: feature:52893-53031:1:exon
so has part: feature:53926-54192:1:exon
so has part: feature:55456-55793:1:exon

XP_005056979.1
type: Protein
SIO_000068: ncbiprotein

position:15063:1
position: 15063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55793:1
position: 55793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15063-15166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23131-23247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25234-25538:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40599-40760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51379-51593:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52893-53031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:53926-54192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:55456-55793:1:exon

MMP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MMP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrix metalloproteinase-24
translation: MSPFQSGKAVQSAVATMQQFYGIPVTGVLDQTTIEWMKKPRCGVPDHPHLRRSRRKKRYALTGQKWRQKHITYSVHNYTPKVGEIDTRRAIRQAFDVWQRVTPLTFEEVPYHEIKNDRKEADIMIFFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNSNHDGNDLFLVAVHELGHALGLEHSNDPSAIMAPFYQYMETHNFKLPQDDLQGIQKIYGPPIEPLEPTRPLPTLPVRRIHSTSERKHERQPRPPSPPLGDRPALPGSKPNICDGNFNTVALFRGEMFVFKDRWFWRLRNNRVQEGYPMQIEQFWKGLPAKIDAAYERSDGKFVFFKGDKYWVFKEVTAEPGYPHSLVELGSCLPREGIDTALRWEPVGKTYFFKGDRYWRYNEDKRATDPGYPKPITVWRGVPQAPQGAFISKEGFYTYFYKGKEYWKFDNQRLSVEPGYPRSILKDWMGCNQKDVERSKDRRLPHDDVDIMVTINDMPSTVNAIAVVIPCILSLCILVLVYTIFQFKNKEVQQNVVYYKRPVQEWV
SIO_010081: MMP24
subclass of: SO_0000673
so part of: MMP24
location: join(15063..15166,23131..23247,25234..25538,40599..40760,51379..51593,52893..53031,53926..54192,55456..55793)
location: region:15063-55793:1
so has part: feature:15063-15166:1:exon
so has part: feature:23131-23247:1:exon
so has part: feature:25234-25538:1:exon
so has part: feature:40599-40760:1:exon
so has part: feature:51379-51593:1:exon
so has part: feature:52893-53031:1:exon
so has part: feature:53926-54192:1:exon
so has part: feature:55456-55793:1:exon

XP_005056980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15063-15166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23131-23247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:25234-25538:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:40599-40760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51379-51593:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52893-53031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:53926-54192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:55456-55793:1:exon

EIF6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: EIF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(60041..66293)
location: region:60041-66293:-1
so has part: feature:60041-66293:-1:exon
subclass of: SO_0000010

101811282
type: Gene
SIO_000068: ncbigene

position:60041:-1
position: 60041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66293:-1
position: 66293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60041-66293:-1:exon

EIF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: EIF6
product: eukaryotic translation initiation factor 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005056921.2
SIO_010081: EIF6
subclass of: SO_0000673
so part of: EIF6
location: complement(join(60041..61637,62751..62932,63475..63651,64888..65063,65770..65874,65960..66293))
location: region:60041-66293:-1
so has part: feature:65960-66293:-1:exon
so has part: feature:65770-65874:-1:exon
so has part: feature:64888-65063:-1:exon
so has part: feature:63475-63651:-1:exon
so has part: feature:62751-62932:-1:exon
so has part: feature:60041-61637:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65960-66293:-1:exon

position:65960:-1
position: 65960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65770-65874:-1:exon

position:65770:-1
position: 65770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65874:-1
position: 65874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64888-65063:-1:exon

position:64888:-1
position: 64888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65063:-1
position: 65063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63475-63651:-1:exon

position:63475:-1
position: 63475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63651:-1
position: 63651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62751-62932:-1:exon

position:62751:-1
position: 62751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62932:-1
position: 62932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:60041-61637:-1:exon

position:61637:-1
position: 61637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EIF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: EIF6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 6
translation: MAVRASFENNNELGCFAKLTNAYCLVAIGGSENFYSVFEGELFGTIPVVHASIAGCRIIGSCRIIGRMCVGNRHGLLVPSSTTDQELQHIRNSLPDSVRIQRVEERLSALGNVTTCNDYVALVHPDLDRETEEILADVLKVEVFRQTIADQVLVGSYCVFSNQGGIVHPKTSIDDQDELSSLLQVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVIESIFRLNEAQPSTIATNMRDSLIDSLT
SIO_010081: EIF6
subclass of: SO_0000673
so part of: EIF6
location: complement(join(61628..61637,62751..62932,63475..63651,64888..65063,65770..65874,65960..66066))
location: region:61628-66066:-1
so has part: feature:65960-66066:-1:exon
so has part: feature:65770-65874:-1:exon
so has part: feature:64888-65063:-1:exon
so has part: feature:63475-63651:-1:exon
so has part: feature:62751-62932:-1:exon
so has part: feature:61628-61637:-1:exon

XP_005056978.1
type: Protein
SIO_000068: ncbiprotein

position:61628:-1
position: 61628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66066:-1
position: 66066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65960-66066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65770-65874:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64888-65063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63475-63651:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62751-62932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61628-61637:-1:exon

LOC107604093
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 66487..69647
location: region:66487-69647:1
so has part: feature:66487-69647:1:exon
subclass of: SO_0000011

107604093
type: Gene
SIO_000068: ncbigene

position:66487:1
position: 66487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69647:1
position: 69647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66487-69647:1:exon

LOC107604093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107604093
product: uncharacterized LOC107604093, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001611927.1
SIO_010081: LOC107604093
subclass of: SO_0000673
so part of: LOC107604093
location: join(66487..66707,68942..69088,69470..69647)
location: region:66487-69647:1
so has part: feature:66487-66707:1:exon
so has part: feature:68942-69088:1:exon
so has part: feature:69470-69647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66487-66707:1:exon

position:66707:1
position: 66707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68942-69088:1:exon

position:68942:1
position: 68942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69088:1
position: 69088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69470-69647:1:exon

position:69470:1
position: 69470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM83C
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FAM83C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(67097..90387)
location: region:67097-90387:-1
so has part: feature:67097-90387:-1:exon
subclass of: SO_0000010

101820170
type: Gene
SIO_000068: ncbigene

position:67097:-1
position: 67097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90387:-1
position: 90387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67097-90387:-1:exon

FAM83C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FAM83C
product: family with sequence similarity 83 member C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056974.2
SIO_010081: FAM83C
subclass of: SO_0000673
so part of: FAM83C
location: complement(join(67097..68249,68339..68701,78164..78288,82599..82766,89722..90387))
location: region:67097-90387:-1
so has part: feature:89722-90387:-1:exon
so has part: feature:82599-82766:-1:exon
so has part: feature:78164-78288:-1:exon
so has part: feature:68339-68701:-1:exon
so has part: feature:67097-68249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89722-90387:-1:exon

position:89722:-1
position: 89722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82599-82766:-1:exon

position:82599:-1
position: 82599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82766:-1
position: 82766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78164-78288:-1:exon

position:78164:-1
position: 78164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78288:-1
position: 78288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:68339-68701:-1:exon

position:68339:-1
position: 68339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68701:-1
position: 68701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:67097-68249:-1:exon

position:68249:-1
position: 68249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM83C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FAM83C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM83C
translation: MFNYLAVEVRPQLHRSYGSQQGVSGPLKSRLEQLKKPWWREPTPLVLQHSETARLAIDAFLEQGERGYLSAITEERELPFLSTLDMDYISRQMNQSFPDPSAVKDKEADPGDADTGDRFSLNSELTSGTYFPLMSDVHPPELELGWPGTPLLTVSGQTQATVIFQRNRTNSIKDLVRSLISRARTVIAIVMDLFTDMEILCDLLQVSSRQHVPVYLILDEEYLKHFVEMCNKMALTQDSFPNMRIRCLSGDTYYSKAGKKFAGQVLEKFVMVDCDQVLAGTYSFTWLCSQVHTGLVTHFRGQIVAEFDKEFRYLYAESRAVTSFCVPEPGTCLSSWNTSKVDNCLLKPTQGNDTETLSPSSSLSNVSIRSIKVSPFMKNSSCSAHQEKQDSSSDSGNKKGKEDTFLKPTCPKQQEEPPDLVNCPPSKPTPASYPKSNLVTARTFVQPEPSSNKPGSQEDSKANSSHCSLPRAGQPLQSLSEGTSSNGTGVKQRAPVATSGELPAENENIFYEEKRQSPGHGQFGLFSPYTQLKRDKKSVKPCYDKFPEDVLLEKNSVYGAEKRMTLGHSKLDLITKYNKLKSKHIHSRFEL
SIO_010081: FAM83C
subclass of: SO_0000673
so part of: FAM83C
location: complement(join(67685..68249,68339..68701,78164..78288,82599..82766,89722..90276))
location: region:67685-90276:-1
so has part: feature:89722-90276:-1:exon
so has part: feature:82599-82766:-1:exon
so has part: feature:78164-78288:-1:exon
so has part: feature:68339-68701:-1:exon
so has part: feature:67685-68249:-1:exon

XP_005057031.2
type: Protein
SIO_000068: ncbiprotein

position:67685:-1
position: 67685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90276:-1
position: 90276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89722-90276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82599-82766:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:78164-78288:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68339-68701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67685-68249:-1:exon

LOC107604093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107604093
product: uncharacterized LOC107604093, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001611926.1
SIO_010081: LOC107604093
subclass of: SO_0000673
so part of: LOC107604093
location: join(67969..68052,68942..69088,69470..69647)
location: region:67969-69647:1
so has part: feature:67969-68052:1:exon
so has part: feature:68942-69088:1:exon
so has part: feature:69470-69647:1:exon

position:67969:1
position: 67969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67969-68052:1:exon

position:68052:1
position: 68052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:68942-69088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69470-69647:1:exon

LOC101820370
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101820370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99811..>147965)
location: region:99811-147965:-1
so has part: feature:99811-147965:-1:exon
subclass of: SO_0000010

101820370
type: Gene
SIO_000068: ncbigene

position:99811:-1
position: 99811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147965:-1
position: 147965
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99811-147965:-1:exon

LOC101820370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101820370
product: ubiquinol-cytochrome-c reductase complex assembly factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005056975.1
SIO_010081: LOC101820370
subclass of: SO_0000673
so part of: LOC101820370
location: complement(join(99811..100987,104906..105019,106309..106386,122240..122348,128150..128207,134614..134686,136929..137036,142378..142482,143801..143905,147807..>147965))
location: region:99811-147965:-1
so has part: feature:147807-147965:-1:exon
so has part: feature:143801-143905:-1:exon
so has part: feature:142378-142482:-1:exon
so has part: feature:136929-137036:-1:exon
so has part: feature:134614-134686:-1:exon
so has part: feature:128150-128207:-1:exon
so has part: feature:122240-122348:-1:exon
so has part: feature:106309-106386:-1:exon
so has part: feature:104906-105019:-1:exon
so has part: feature:99811-100987:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147807-147965:-1:exon

position:147807:-1
position: 147807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143801-143905:-1:exon

position:143801:-1
position: 143801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143905:-1
position: 143905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142378-142482:-1:exon

position:142378:-1
position: 142378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142482:-1
position: 142482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:136929-137036:-1:exon

position:136929:-1
position: 136929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137036:-1
position: 137036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:134614-134686:-1:exon

position:134614:-1
position: 134614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134686:-1
position: 134686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:128150-128207:-1:exon

position:128150:-1
position: 128150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128207:-1
position: 128207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122240-122348:-1:exon

position:122240:-1
position: 122240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122348:-1
position: 122348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:106309-106386:-1:exon

position:106309:-1
position: 106309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106386:-1
position: 106386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:104906-105019:-1:exon

position:104906:-1
position: 104906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105019:-1
position: 105019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:99811-100987:-1:exon

position:100987:-1
position: 100987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101820370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101820370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquinol-cytochrome-c reductase complex assembly factor 1
translation: PAGAVPAPPLWRPPPQPEGCRRGLLPLPALWPRARCLAKQRGEISRGVCVCRRSCQTGVTQWIAGCSGLLQTAAVPGRCQRMLCSTFQRHKAGPFQLSKFCGGLIQANGAITQQNRFFYNMNKHLSAKDSLQPSEEKVGAFTRIIEAMGFTGPLKYSRWKIKVAALRMYTCCVEKTDYEEFFNRCQLPDTLNSWFLVAQLHVWMCLVRLKQEGRTGKYMCRYIVHCMWEDVEQRGKVMGINSAVLKEDLKRMVENFYAALFGYDEGILCDDRVLAAALWRNLFNRNCDDPRHLELLVEYVRKQVQHLDALSGEDLLLTGEVSWRPLVESNARSILKPLSPIYNDEGL
SIO_010081: LOC101820370
subclass of: SO_0000673
so part of: LOC101820370
location: complement(join(100853..100987,104906..105019,106309..106386,122240..122348,128150..128207,134614..134686,136929..137036,142378..142482,143801..143905,147807..>147965))
location: region:100853-147965:-1
so has part: feature:147807-147965:-1:exon
so has part: feature:143801-143905:-1:exon
so has part: feature:142378-142482:-1:exon
so has part: feature:136929-137036:-1:exon
so has part: feature:134614-134686:-1:exon
so has part: feature:128150-128207:-1:exon
so has part: feature:122240-122348:-1:exon
so has part: feature:106309-106386:-1:exon
so has part: feature:104906-105019:-1:exon
so has part: feature:100853-100987:-1:exon

XP_005057032.1
type: Protein
SIO_000068: ncbiprotein

position:100853:-1
position: 100853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147807-147965:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143801-143905:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142378-142482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:136929-137036:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134614-134686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128150-128207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122240-122348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106309-106386:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:104906-105019:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:100853-100987:-1:exon

GDF5
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GDF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(165529..169263)
location: region:165529-169263:-1
so has part: feature:165529-169263:-1:exon
subclass of: SO_0000010

101810960
type: Gene
SIO_000068: ncbigene

position:165529:-1
position: 165529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169263:-1
position: 169263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165529-169263:-1:exon

GDF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GDF5
product: growth differentiation factor 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005056919.1
SIO_010081: GDF5
subclass of: SO_0000673
so part of: GDF5
location: complement(join(165529..166833,168409..169263))
location: region:165529-169263:-1
so has part: feature:168409-169263:-1:exon
so has part: feature:165529-166833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:168409-169263:-1:exon

position:168409:-1
position: 168409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:165529-166833:-1:exon

position:166833:-1
position: 166833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GDF5
product: growth differentiation factor 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056920.1
SIO_010081: GDF5
subclass of: SO_0000673
so part of: GDF5
location: complement(join(165529..166833,168409..168506,168728..168923))
location: region:165529-168923:-1
so has part: feature:168728-168923:-1:exon
so has part: feature:168409-168506:-1:exon
so has part: feature:165529-166833:-1:exon

position:168923:-1
position: 168923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168728-168923:-1:exon

position:168728:-1
position: 168728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168409-168506:-1:exon

position:168506:-1
position: 168506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:165529-166833:-1:exon

GDF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GDF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 5 isoform X1
translation: MKILHFLTLLLWHLTWLSLDLVPGALSNSEAGQGNPGSKLSFLKAEGKETNLSARAGTLRTASHGYSAGTSKARTKSSTVQAGALLAKNGDSKKVPSRAAATEGKVGHLPSRPSSVRTVTPKVQNLSSKVALKKTGTSSTDSDSFKTKKTKEPVSQREAKEPFRHPPITPHEYMLSLYRTLSDAERKGVNGSVKLEAGLANTITSFIDKGQDERTPAIRKQKYIFDISALEKDGLLGAELRILRKKPSDTWKSHSSGKTSQVKLFSCSTNRQSSTLLDSRTVSITDTPKWEVFDIWKLFRSFKNLVNLCFELETFDRGRAVDLRSVGFNRTGRQVNEKALFLVFGRTKKRDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPTKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR
SIO_010081: GDF5
subclass of: SO_0000673
so part of: GDF5
location: complement(join(165965..166833,168409..169042))
location: region:165965-169042:-1
so has part: feature:168409-169042:-1:exon
so has part: feature:165965-166833:-1:exon

XP_005056976.1
type: Protein
SIO_000068: ncbiprotein

position:165965:-1
position: 165965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169042:-1
position: 169042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168409-169042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:165965-166833:-1:exon

GDF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GDF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 5 isoform X2
translation: MDTVLGPQRPGLKAVLFRLELCWPRTVTQRRFPQEQQPRRARTLSDAERKGVNGSVKLEAGLANTITSFIDKGQDERTPAIRKQKYIFDISALEKDGLLGAELRILRKKPSDTWKSHSSGKTSQVKLFSCSTNRQSSTLLDSRTVSITDTPKWEVFDIWKLFRSFKNLVNLCFELETFDRGRAVDLRSVGFNRTGRQVNEKALFLVFGRTKKRDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPTKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR
SIO_010081: GDF5
subclass of: SO_0000673
so part of: GDF5
location: complement(join(165965..166833,168409..168506,168728..168852))
location: region:165965-168852:-1
so has part: feature:168728-168852:-1:exon
so has part: feature:168409-168506:-1:exon
so has part: feature:165965-166833:-1:exon

XP_005056977.1
type: Protein
SIO_000068: ncbiprotein

position:168852:-1
position: 168852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168728-168852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168409-168506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:165965-166833:-1:exon

CEP250
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CEP250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 173464..209247
location: region:173464-209247:1
so has part: feature:173464-209247:1:exon
subclass of: SO_0000010

101820565
type: Gene
SIO_000068: ncbigene

position:173464:1
position: 173464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209247:1
position: 209247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173464-209247:1:exon

CEP250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CEP250
product: centrosomal protein 250
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303117.1
SIO_010081: CEP250
subclass of: SO_0000673
so part of: CEP250
location: join(173464..173505,175487..175675,175882..175938,176625..176707,177269..177434,179092..179198,180967..181194,181770..181866,182358..182456,183199..183360,183668..183846,184298..184480,184609..184753,185022..185168,185348..185578,186969..187162,189619..189746,189925..190104,192837..192871,193328..193608,197016..197175,198620..198932,199337..199464,199724..199840,202280..205063,206665..206820,207187..207300,207465..207515,208533..209247)
location: region:173464-209247:1
so has part: feature:173464-173505:1:exon
so has part: feature:175487-175675:1:exon
so has part: feature:175882-175938:1:exon
so has part: feature:176625-176707:1:exon
so has part: feature:177269-177434:1:exon
so has part: feature:179092-179198:1:exon
so has part: feature:180967-181194:1:exon
so has part: feature:181770-181866:1:exon
so has part: feature:182358-182456:1:exon
so has part: feature:183199-183360:1:exon
so has part: feature:183668-183846:1:exon
so has part: feature:184298-184480:1:exon
so has part: feature:184609-184753:1:exon
so has part: feature:185022-185168:1:exon
so has part: feature:185348-185578:1:exon
so has part: feature:186969-187162:1:exon
so has part: feature:189619-189746:1:exon
so has part: feature:189925-190104:1:exon
so has part: feature:192837-192871:1:exon
so has part: feature:193328-193608:1:exon
so has part: feature:197016-197175:1:exon
so has part: feature:198620-198932:1:exon
so has part: feature:199337-199464:1:exon
so has part: feature:199724-199840:1:exon
so has part: feature:202280-205063:1:exon
so has part: feature:206665-206820:1:exon
so has part: feature:207187-207300:1:exon
so has part: feature:207465-207515:1:exon
so has part: feature:208533-209247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173464-173505:1:exon

position:173505:1
position: 173505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175487-175675:1:exon

position:175487:1
position: 175487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175675:1
position: 175675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175882-175938:1:exon

position:175882:1
position: 175882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175938:1
position: 175938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176625-176707:1:exon

position:176625:1
position: 176625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176707:1
position: 176707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:177269-177434:1:exon

position:177269:1
position: 177269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177434:1
position: 177434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:179092-179198:1:exon

position:179092:1
position: 179092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179198:1
position: 179198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:180967-181194:1:exon

position:180967:1
position: 180967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181194:1
position: 181194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:181770-181866:1:exon

position:181770:1
position: 181770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181866:1
position: 181866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:182358-182456:1:exon

position:182358:1
position: 182358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182456:1
position: 182456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:183199-183360:1:exon

position:183199:1
position: 183199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183360:1
position: 183360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:183668-183846:1:exon

position:183668:1
position: 183668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183846:1
position: 183846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:184298-184480:1:exon

position:184298:1
position: 184298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184480:1
position: 184480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:184609-184753:1:exon

position:184609:1
position: 184609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184753:1
position: 184753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:185022-185168:1:exon

position:185022:1
position: 185022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185168:1
position: 185168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:185348-185578:1:exon

position:185348:1
position: 185348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185578:1
position: 185578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:186969-187162:1:exon

position:186969:1
position: 186969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187162:1
position: 187162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:189619-189746:1:exon

position:189619:1
position: 189619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189746:1
position: 189746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:189925-190104:1:exon

position:189925:1
position: 189925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190104:1
position: 190104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:192837-192871:1:exon

position:192837:1
position: 192837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192871:1
position: 192871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:193328-193608:1:exon

position:193328:1
position: 193328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193608:1
position: 193608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:197016-197175:1:exon

position:197016:1
position: 197016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197175:1
position: 197175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:198620-198932:1:exon

position:198620:1
position: 198620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198932:1
position: 198932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:199337-199464:1:exon

position:199337:1
position: 199337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199464:1
position: 199464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:199724-199840:1:exon

position:199724:1
position: 199724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199840:1
position: 199840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:202280-205063:1:exon

position:202280:1
position: 202280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205063:1
position: 205063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:206665-206820:1:exon

position:206665:1
position: 206665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206820:1
position: 206820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:207187-207300:1:exon

position:207187:1
position: 207187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207300:1
position: 207300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:207465-207515:1:exon

position:207465:1
position: 207465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207515:1
position: 207515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:208533-209247:1:exon

position:208533:1
position: 208533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEP250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CEP250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosome-associated protein CEP250
translation: MRLTPRTIPDETRTASLVGFVAQESGRFACRASLKTHFGRFRDPLDLPDVGSGYVGAVGQVEPHAPVPSLCWLPLSQVLQYQTWCRELEQQVKAGGGSLPGRWEATADHSLENALLQVEERQQRCENLAEVNTLLREHLDKANEVNSALREDVGKLTVDWMRAREELELKESEWRSERELYDNYLRGEHNRLLSLWRQVVTFRRHFLEMKTATDRDLSELKAEQVRLSGSILVNFSCLNSCVQLRESIPLGNPVLKDQAEQQVEPKINQTAQEVIALQVRWDMEKKELQERVMELSALLVQSQKQNEEKEKTMKTLNDTVEILESSWIEKEFAASLTNNAKEENLFLQKLVRNITEMVLDDSDSLVSIICTDSCQHADSGDIFSSPRSVDTGHAFGLVLEALARMRGATRALREELSAVQDSNNFLLQQQRHQEETCREVQQRLEQLEEKCKKSSSHQQHLQSLVETLRSDCANLEKTREELQKQLGLMEQEASRLHQSNAELQMKEESAQAEKAEQQDRMERVRHKQELLVKDLAALEAKHSLLQSELVVKRQTLEKLQLQKDLLEQEKDEFAIALKKAEQSVAELTGAQNKLNAERADLQAATVKMSSINEALALDKVQLNKYVWQLEQEKEVLSAKVDEMERAKICEQEKLNFCERANEELCAEKARLEHLLKEAEEQQEELWLKLRTLGEEKAETQEKFHQVSQEQESSSRALEQLRRESSGQGHALAQVCREKELLGQEKAALEGRLAAMEQQQHDLSKELSETRSAKESLESSLFAAQQQISQLEETRNHLEAQMLTVKQAKEVIEGEVKCLQGELEAERALRRQEQEDTAQQLLQAEQQHQESLRLQRTAQQLELNKLLQDLVGDRGLEQREALQKQVGELTSQLAASRESQEAIVQRAQKDVSEAQEQSRQKLLEVEHTKKWLEEAEHQNKELQVHLQNLERERSQWKEVAQQNSELQASVNVLEREKARLTLSLEEKDLDLRTLEENNLAQINQASHLRSALNQAEQLHSEHRRELQELNTQIRALQDTVLEMEAAQATREKQLLQELEESQAGERCLKASVDVLETEVSQLRVSLRSSHDRAEALATQCQQASGAHLETRSQLDKLLLLLHHMIRNSRDLVTWNSEEGHVVGLAASQSEDVPAEFTVDRVAAYLQDLQQHLEHSQKDLNDARKKIQALELELGTGQAQMDNLKASNQELQIQLDESQRGLEMLAAVLAAPPQRNTGVELQEVGEGQEGSWDGLSELGKMQHQGEPSKGLQHAERQRERGSLCLPLGQESRSGMRSKAREGMSDPFLPVLQHERDRLQADKEKLEYEIKLLEESVTASETRAITAIDKNHSLEQELQTALSMLKIKNEEVQNQGKKMEFLQKEAAETKGLQEHLTRVTAILSEREEEMKLYQEQMRMLEKQKEMHKTALNQVIKDITEKEQKTESQQEQIQELEKQQEKQRLVLSKMSQELEEKDQEIRSQQELIQELEKQLELQNSAVSRVSKELEDRCLEIKFQEEKIMILEQHGAVQVRNLLVDLDDMQGNLKEKSLELLSLTQQIQEMEKEREDVKSLNATLEYLKTVLKDRESECDIQREELRLLQQHKEQQDRHLQELLGKVEIMTLSLSKKDQELESQQKQMQEAEVMEMQLKTVCDQLEQTLATLKEKDRLMDIQKQQTKSYEEKIEEKINVLHRDLEYSRTVLKEKDLLIESQKELIETFQKQKQDSEQQKQILQHLQVELKEKQQEILSLRKQCEACKEREEKHEAEQKNFHATALTLKEKEEKICVLEDAITKLQQQKEKTAVQTKAILQKLEYAESSLEAKDQEIVSLQEHVQELREQKGVAGQQARNLEQDLDKASQMLQKNHLEFLKQTEQVNTFQLSEESMKIALTSCQKPVTLLEEVVRKKDEDSDALSQKLQHIEEKLKTSQNLQLRLTEKNEEVRRDGELEFLKEAFPERKEIKAQSEQNQLEKEIRALWEDLQHVQQTLTKKDKEIKYQTDT…
SIO_010081: CEP250
subclass of: SO_0000673
so part of: CEP250
location: join(173464..173505,175487..175675,175882..175938,176625..176707,177269..177434,179092..179198,180967..181194,181770..181866,182358..182456,183199..183360,183668..183846,184298..184480,184609..184753,185022..185168,185348..185578,186969..187162,189619..189746,189925..190104,192837..192871,193328..193608,197016..197175,198620..198932,199337..199464,199724..199840,202280..205063,206665..206820,207187..207300,207465..207515,208533..208820)
location: region:173464-208820:1
so has part: feature:173464-173505:1:exon
so has part: feature:175487-175675:1:exon
so has part: feature:175882-175938:1:exon
so has part: feature:176625-176707:1:exon
so has part: feature:177269-177434:1:exon
so has part: feature:179092-179198:1:exon
so has part: feature:180967-181194:1:exon
so has part: feature:181770-181866:1:exon
so has part: feature:182358-182456:1:exon
so has part: feature:183199-183360:1:exon
so has part: feature:183668-183846:1:exon
so has part: feature:184298-184480:1:exon
so has part: feature:184609-184753:1:exon
so has part: feature:185022-185168:1:exon
so has part: feature:185348-185578:1:exon
so has part: feature:186969-187162:1:exon
so has part: feature:189619-189746:1:exon
so has part: feature:189925-190104:1:exon
so has part: feature:192837-192871:1:exon
so has part: feature:193328-193608:1:exon
so has part: feature:197016-197175:1:exon
so has part: feature:198620-198932:1:exon
so has part: feature:199337-199464:1:exon
so has part: feature:199724-199840:1:exon
so has part: feature:202280-205063:1:exon
so has part: feature:206665-206820:1:exon
so has part: feature:207187-207300:1:exon
so has part: feature:207465-207515:1:exon
so has part: feature:208533-208820:1:exon

XP_016158603.1
type: Protein
SIO_000068: ncbiprotein

position:208820:1
position: 208820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173464-173505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175487-175675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175882-175938:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176625-176707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177269-177434:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:179092-179198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180967-181194:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:181770-181866:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:182358-182456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:183199-183360:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:183668-183846:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:184298-184480:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:184609-184753:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:185022-185168:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:185348-185578:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:186969-187162:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:189619-189746:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:189925-190104:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:192837-192871:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:193328-193608:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:197016-197175:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:198620-198932:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:199337-199464:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:199724-199840:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:202280-205063:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:206665-206820:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:207187-207300:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:207465-207515:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:208533-208820:1:exon

LOC101820956
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101820956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 217311..220778
location: region:217311-220778:1
so has part: feature:217311-220778:1:exon
subclass of: SO_0000010

101820956
type: Gene
SIO_000068: ncbigene

position:217311:1
position: 217311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220778:1
position: 220778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217311-220778:1:exon

LOC101820956
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101820956
product: uncharacterized LOC101820956
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005056977.2
SIO_010081: LOC101820956
subclass of: SO_0000673
so part of: LOC101820956
location: join(217311..217774,217975..218107,218903..219064,219409..219498,219750..220778)
location: region:217311-220778:1
so has part: feature:217311-217774:1:exon
so has part: feature:217975-218107:1:exon
so has part: feature:218903-219064:1:exon
so has part: feature:219409-219498:1:exon
so has part: feature:219750-220778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217311-217774:1:exon

position:217774:1
position: 217774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:217975-218107:1:exon

position:217975:1
position: 217975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218107:1
position: 218107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:218903-219064:1:exon

position:218903:1
position: 218903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219064:1
position: 219064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:219409-219498:1:exon

position:219409:1
position: 219409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219498:1
position: 219498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:219750-220778:1:exon

position:219750:1
position: 219750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101820956
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101820956
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101820956
translation: MSIFSQETCCCVSGARVSVGSQHHESPRRPQLGGDSRKMDPELLNLPLAVKIPVAPGTKPVFSRGKLGENLVRPYPYFNLDDPYSHHLSPAYNCLHDPHLRDYHKRKDVLQLLKRQGVITSDNKVVCTLKEFNEYRNYLTRLKLQSEQFLKQQEEGLLPLLAKLKDGPKLPGTSDTSCRRKRRLQPQKPTCPCPQKSKETPLKSGRFRKVKIASDEGQTYSRAKLGTAADSQRKRHNTAHSLFKAVLRQLTAAEAQKLQELVEIIVYKVFVRLKVPRNQRINFLRNAAQGIRGSIFSSCRRTPLDRRQKIEMVAKELLAMVLEGLGYCLEPKASKPRRAVRWKEQPVDGRATLVDKSEEDEAASSDSAHLHACLDKLTRQVVKNVRCLLKSMVASQFEGDSRCEHTKILELPKDKVSNIQMQPGISGACEGQSQEASTGVKLPQKPKIRGMQNRESSFGQGPNLLQSCAGPGGCQHCCWLPEEARWHCQWPVECCV
SIO_010081: LOC101820956
subclass of: SO_0000673
so part of: LOC101820956
location: join(217698..217774,217975..218107,218903..219064,219409..219498,219750..220778)
location: region:217698-220778:1
so has part: feature:217698-217774:1:exon
so has part: feature:217975-218107:1:exon
so has part: feature:218903-219064:1:exon
so has part: feature:219409-219498:1:exon
so has part: feature:219750-220778:1:exon

XP_005057034.1
type: Protein
SIO_000068: ncbiprotein

position:217698:1
position: 217698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217698-217774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:217975-218107:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:218903-219064:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219409-219498:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:219750-220778:1:exon

LOC101821147
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101821147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(226014..256530)
location: region:226014-256530:-1
so has part: feature:226014-256530:-1:exon
subclass of: SO_0000010

101821147
type: Gene
SIO_000068: ncbigene

position:226014:-1
position: 226014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256530:-1
position: 256530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226014-256530:-1:exon

LOC101821147
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101821147
product: rho GTPase-activating protein 39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056978.1
SIO_010081: LOC101821147
subclass of: SO_0000673
so part of: LOC101821147
location: complement(join(226014..228702,229051..229220,229690..229781,230725..230924,233058..233131,240581..240670,241781..242327,244888..246196,255388..255786,256331..256358,256521..256530))
location: region:226014-256530:-1
so has part: feature:256521-256530:-1:exon
so has part: feature:256331-256358:-1:exon
so has part: feature:255388-255786:-1:exon
so has part: feature:244888-246196:-1:exon
so has part: feature:241781-242327:-1:exon
so has part: feature:240581-240670:-1:exon
so has part: feature:233058-233131:-1:exon
so has part: feature:230725-230924:-1:exon
so has part: feature:229690-229781:-1:exon
so has part: feature:229051-229220:-1:exon
so has part: feature:226014-228702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256521-256530:-1:exon

position:256521:-1
position: 256521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:256331-256358:-1:exon

position:256331:-1
position: 256331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256358:-1
position: 256358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:255388-255786:-1:exon

position:255388:-1
position: 255388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255786:-1
position: 255786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:244888-246196:-1:exon

position:244888:-1
position: 244888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246196:-1
position: 246196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:241781-242327:-1:exon

position:241781:-1
position: 241781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242327:-1
position: 242327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:240581-240670:-1:exon

position:240581:-1
position: 240581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240670:-1
position: 240670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:233058-233131:-1:exon

position:233058:-1
position: 233058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233131:-1
position: 233131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:230725-230924:-1:exon

position:230725:-1
position: 230725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230924:-1
position: 230924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:229690-229781:-1:exon

position:229690:-1
position: 229690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229781:-1
position: 229781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:229051-229220:-1:exon

position:229051:-1
position: 229051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229220:-1
position: 229220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:226014-228702:-1:exon

position:228702:-1
position: 228702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101821147
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101821147
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 39-like
translation: MGAVIPHMYLLDSSDWVEIIEPRSQERMYVNLSSGECSWEPPPNLTVRQSDHKQWWELFDHNNNRFYYYNASTRQTVWHRPQGCDIVPLAQLQAMKGSSQAGCCGREQRGSTGSSGRSTPVQMAVLQDVEKGKWDSAVEKRKDPARETPTHWEPLPGTKAAMLVKVNSLRQMQSFSNSSLQLQGAPKPSSPKSLPKAAVYARPRSMSQSPGATKQMPAGEAKQTMQIKKTESGGFCLVLMNGPTSPTAPRSRTGTPQPASPTYASPAPIYDEPSLELPIYDEPPVDMDTESICVSGMSPPRSPSNSLKKQLQPAKLLQHPSMQQQQAAKKHARNPSSTEYSPAGREYIKHMVNVDQAAKLSHSSAAATDTSTKLPGQLASKDSFKQSWRVLEANVLKNMELHHSRQNSLQTQEYPTSISHQDSGYSTGPSPSLRKRKGRRQGTGQARPGSVGSSSELTALNDKVIAEMRAVVGRSAACRGSKASLDAESLESSVPAESSKVRFQSDHLKKCISRSSRDDVSASSRSLYRQDLEIREAFPSNVAAPQDTMRQKRTFEKIDSLEKNLTSQTSLASSGTTRHSSQPESTELEPKEEGSSQRGGCVGCHFPYSTLRKPISQSSMADWASKNLNMHTQGIFRRRISLSNMLSWNGGSIKKPMLITSNRSVKKEACEMFKLVQSYMGDRHTRMDRNHVALLAVTKCWSTQGLRDELYIQLIRQTTDNSSYRSLAWGWELMAISLAFFSPSPKFQSYLEGYIYRHLDSDEKIAQHIKELVDLKNKKITKSRKKRKQNIEDEGLPISTYAKYCYRKLQKVAVTGGKKGLRKPTVEEITHARNAILTPSLFGSSLEEIMLRQQSMHPGNKLPWVQTQLSQQVLALGGEQTEGIFRIPGDIDEVNALKLQVDQWKIPNNLSDPNIPASLLKLWYRELEEPVIPQQFYKECINNYENPDAAVAVVQLLPELNRLVLCYLIHFLQIFAQPSNVGRTKMDVNNLAMVMAPNCLRCQSDDPRVIFENTRKEMSFLRMLIVHLDTSFIKGLV
SIO_010081: LOC101821147
subclass of: SO_0000673
so part of: LOC101821147
location: complement(join(228508..228702,229051..229220,229690..229781,230725..230924,233058..233131,240581..240670,241781..242327,244888..246196,255388..255786,256331..256358,256521..256530))
location: region:228508-256530:-1
so has part: feature:256521-256530:-1:exon
so has part: feature:256331-256358:-1:exon
so has part: feature:255388-255786:-1:exon
so has part: feature:244888-246196:-1:exon
so has part: feature:241781-242327:-1:exon
so has part: feature:240581-240670:-1:exon
so has part: feature:233058-233131:-1:exon
so has part: feature:230725-230924:-1:exon
so has part: feature:229690-229781:-1:exon
so has part: feature:229051-229220:-1:exon
so has part: feature:228508-228702:-1:exon

XP_005057035.1
type: Protein
SIO_000068: ncbiprotein

position:228508:-1
position: 228508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256521-256530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256331-256358:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255388-255786:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:244888-246196:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:241781-242327:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:240581-240670:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233058-233131:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:230725-230924:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:229690-229781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:229051-229220:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:228508-228702:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 293044..293115
location: region:293044-293115:1
so has part: feature:293044-293115:1:exon
subclass of: SO_0000663

107604109
type: Gene
SIO_000068: ncbigene

position:293044:1
position: 293044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293115:1
position: 293115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293044-293115:1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 59894
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); tRNA features were annotated by tRNAscan-SE; Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:293077..293079,aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: 293044..293115
location: region:293044-293115:1
so has part: feature:293044-293115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293044-293115:1:exon

RBM39
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 299593..326577
location: region:299593-326577:1
so has part: feature:299593-326577:1:exon
subclass of: SO_0000010

101812061
type: Gene
SIO_000068: ncbigene

position:299593:1
position: 299593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326577:1
position: 326577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299593-326577:1:exon

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RBM39
product: RNA binding motif protein 39, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005056924.1
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(299593..299658,301515..301564,304421..304615,309809..309874,309980..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..326577)
location: region:299593-326577:1
so has part: feature:299593-299658:1:exon
so has part: feature:301515-301564:1:exon
so has part: feature:304421-304615:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309980-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-326577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299593-299658:1:exon

position:299658:1
position: 299658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301515-301564:1:exon

position:301515:1
position: 301515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301564:1
position: 301564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:304421-304615:1:exon

position:304421:1
position: 304421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304615:1
position: 304615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309809-309874:1:exon

position:309809:1
position: 309809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309874:1
position: 309874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:309980-310033:1:exon

position:309980:1
position: 309980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310033:1
position: 310033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:311396-311513:1:exon

position:311396:1
position: 311396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:311513:1
position: 311513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312096-312248:1:exon

position:312096:1
position: 312096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312248:1
position: 312248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:312738-312875:1:exon

position:312738:1
position: 312738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312875:1
position: 312875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:314370-314435:1:exon

position:314370:1
position: 314370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314435:1
position: 314435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:315447-315651:1:exon

position:315447:1
position: 315447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315651:1
position: 315651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:315857-315934:1:exon

position:315857:1
position: 315857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315934:1
position: 315934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:321419-321451:1:exon

position:321419:1
position: 321419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321451:1
position: 321451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:322451-322526:1:exon

position:322451:1
position: 322451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322526:1
position: 322526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:322673-322778:1:exon

position:322673:1
position: 322673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322778:1
position: 322778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:325414-325492:1:exon

position:325414:1
position: 325414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325492:1
position: 325492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:325582-326577:1:exon

position:325582:1
position: 325582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RBM39
product: RNA binding motif protein 39, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_016303225.1
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(299593..299658,301515..301564,304421..304615,309809..309874,309983..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..326577)
location: region:299593-326577:1
so has part: feature:299593-299658:1:exon
so has part: feature:301515-301564:1:exon
so has part: feature:304421-304615:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309983-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-326577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299593-299658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301515-301564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304421-304615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309809-309874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309983-310033:1:exon

position:309983:1
position: 309983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322451-322526:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322673-322778:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325414-325492:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:325582-326577:1:exon

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RBM39
product: RNA binding motif protein 39, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005056925.1
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(299593..299658,301515..301564,304421..304615,309980..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..326577)
location: region:299593-326577:1
so has part: feature:299593-299658:1:exon
so has part: feature:301515-301564:1:exon
so has part: feature:304421-304615:1:exon
so has part: feature:309980-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-326577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299593-299658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301515-301564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304421-304615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309980-310033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322451-322526:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322673-322778:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325414-325492:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325582-326577:1:exon

RBM39
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: RBM39
product: RNA binding motif protein 39, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_219236.2
SIO_010081: RBM39
so part of: RBM39
location: join(299593..299658,301515..301564,304421..304615,309809..309874,309980..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,317464..317644,321419..321451,322451..322502)
location: region:299593-322502:1
so has part: feature:299593-299658:1:exon
so has part: feature:301515-301564:1:exon
so has part: feature:304421-304615:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309980-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:317464-317644:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322502:1:exon

position:322502:1
position: 322502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299593-299658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301515-301564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304421-304615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309809-309874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309980-310033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317464-317644:1:exon

position:317464:1
position: 317464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:317644:1
position: 317644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322451-322502:1:exon

RBM39
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: RBM39
product: RNA binding motif protein 39, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_001611933.1
SIO_010081: RBM39
so part of: RBM39
location: join(299593..299658,301515..301564,304421..304615,309809..309874,309980..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,317521..317644,321419..321451,322451..322502)
location: region:299593-322502:1
so has part: feature:299593-299658:1:exon
so has part: feature:301515-301564:1:exon
so has part: feature:304421-304615:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309980-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:317521-317644:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299593-299658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301515-301564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304421-304615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309809-309874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309980-310033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:317521-317644:1:exon

position:317521:1
position: 317521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322451-322502:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X1
translation: MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSRDRKRSRSKERKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNIAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(299608..299658,301515..301564,304421..304615,309809..309874,309980..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..325682)
location: region:299608-325682:1
so has part: feature:299608-299658:1:exon
so has part: feature:301515-301564:1:exon
so has part: feature:304421-304615:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309980-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-325682:1:exon

XP_005056981.1
type: Protein
SIO_000068: ncbiprotein

position:299608:1
position: 299608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325682:1
position: 325682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299608-299658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301515-301564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304421-304615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309809-309874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309980-310033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322451-322526:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322673-322778:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325414-325492:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:325582-325682:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X2
translation: MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSRDRKRSRSKERKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNIAIRGKIGLPHSIKLRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(299608..299658,301515..301564,304421..304615,309809..309874,309983..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..325682)
location: region:299608-325682:1
so has part: feature:299608-299658:1:exon
so has part: feature:301515-301564:1:exon
so has part: feature:304421-304615:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309983-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-325682:1:exon

XP_016158711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299608-299658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301515-301564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304421-304615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309809-309874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:309983-310033:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322451-322526:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:322673-322778:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325414-325492:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:325582-325682:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X3
translation: MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSRDRKRSRSKERKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(299608..299658,301515..301564,304421..304615,309980..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..325682)
location: region:299608-325682:1
so has part: feature:299608-299658:1:exon
so has part: feature:301515-301564:1:exon
so has part: feature:304421-304615:1:exon
so has part: feature:309980-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-325682:1:exon

XP_005056982.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:299608-299658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301515-301564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:304421-304615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309980-310033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322451-322526:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322673-322778:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325414-325492:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325582-325682:1:exon

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RBM39
product: RNA binding motif protein 39, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005056926.2
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(304527..304615,308530..308909,309809..309874,309980..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..326577)
location: region:304527-326577:1
so has part: feature:304527-304615:1:exon
so has part: feature:308530-308909:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309980-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-326577:1:exon

position:304527:1
position: 304527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304527-304615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308530-308909:1:exon

position:308530:1
position: 308530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308909:1
position: 308909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:309809-309874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309980-310033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322451-322526:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322673-322778:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325414-325492:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325582-326577:1:exon

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RBM39
product: RNA binding motif protein 39, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_016303226.1
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(304527..304615,308530..308909,309809..309874,309983..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..326577)
location: region:304527-326577:1
so has part: feature:304527-304615:1:exon
so has part: feature:308530-308909:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309983-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-326577:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304527-304615:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308530-308909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309809-309874:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309983-310033:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322451-322526:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:322673-322778:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325414-325492:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:325582-326577:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X4
translation: MDLVKDYLMSSARRVFQGVSLQFVATAERINCVQMESQSPVHSIQFVQQCLCAWWRYRKNVNSSGPKFNIAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(308722..308909,309809..309874,309980..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..325682)
location: region:308722-325682:1
so has part: feature:308722-308909:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309980-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-325682:1:exon

XP_005056983.1
type: Protein
SIO_000068: ncbiprotein

position:308722:1
position: 308722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:308722-308909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309809-309874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309980-310033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322451-322526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322673-322778:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:325414-325492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325582-325682:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X5
translation: MDLVKDYLMSSARRVFQGVSLQFVATAERINCVQMESQSPVHSIQFVQQCLCAWWRYRKNVNSSGPKFNIAIRGKIGLPHSIKLRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(308722..308909,309809..309874,309983..310033,311396..311513,312096..312248,312738..312875,314370..314435,315447..315651,315857..315934,321419..321451,322451..322526,322673..322778,325414..325492,325582..325682)
location: region:308722-325682:1
so has part: feature:308722-308909:1:exon
so has part: feature:309809-309874:1:exon
so has part: feature:309983-310033:1:exon
so has part: feature:311396-311513:1:exon
so has part: feature:312096-312248:1:exon
so has part: feature:312738-312875:1:exon
so has part: feature:314370-314435:1:exon
so has part: feature:315447-315651:1:exon
so has part: feature:315857-315934:1:exon
so has part: feature:321419-321451:1:exon
so has part: feature:322451-322526:1:exon
so has part: feature:322673-322778:1:exon
so has part: feature:325414-325492:1:exon
so has part: feature:325582-325682:1:exon

XP_016158712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:308722-308909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:309809-309874:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309983-310033:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:311396-311513:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312096-312248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312738-312875:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:314370-314435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:315447-315651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315857-315934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:321419-321451:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322451-322526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322673-322778:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:325414-325492:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325582-325682:1:exon

ROMO1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ROMO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(327971..330368)
location: region:327971-330368:-1
so has part: feature:327971-330368:-1:exon
subclass of: SO_0000010

101812722
type: Gene
SIO_000068: ncbigene

position:327971:-1
position: 327971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330368:-1
position: 330368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327971-330368:-1:exon

ROMO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ROMO1
product: reactive oxygen species modulator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303261.1
SIO_010081: ROMO1
subclass of: SO_0000673
so part of: ROMO1
location: complement(join(327971..328188,329704..329834,330361..330368))
location: region:327971-330368:-1
so has part: feature:330361-330368:-1:exon
so has part: feature:329704-329834:-1:exon
so has part: feature:327971-328188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330361-330368:-1:exon

position:330361:-1
position: 330361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329704-329834:-1:exon

position:329704:-1
position: 329704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329834:-1
position: 329834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:327971-328188:-1:exon

position:328188:-1
position: 328188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROMO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ROMO1
product: reactive oxygen species modulator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005056927.2
SIO_010081: ROMO1
subclass of: SO_0000673
so part of: ROMO1
location: complement(join(327971..328188,329704..329834,330048..330300))
location: region:327971-330300:-1
so has part: feature:330048-330300:-1:exon
so has part: feature:329704-329834:-1:exon
so has part: feature:327971-328188:-1:exon

position:330300:-1
position: 330300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330048-330300:-1:exon

position:330048:-1
position: 330048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:329704-329834:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:327971-328188:-1:exon

ROMO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ROMO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reactive oxygen species modulator 1
translation: MPVTVGPYGQSQPSCFDRIKMGFMMGFAVGMAAGALFGTFSCLRIGMRGRELMGGVGKTMMQSGGTFGTFMAIGMGIRC
SIO_010081: ROMO1
subclass of: SO_0000673
so part of: ROMO1
location: complement(join(328080..328188,329704..329834))
location: region:328080-329834:-1
so has part: feature:329704-329834:-1:exon
so has part: feature:328080-328188:-1:exon

XP_016158747.1
type: Protein
SIO_000068: ncbiprotein

position:328080:-1
position: 328080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329704-329834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328080-328188:-1:exon

ROMO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ROMO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reactive oxygen species modulator 1
translation: MPVTVGPYGQSQPSCFDRIKMGFMMGFAVGMAAGALFGTFSCLRIGMRGRELMGGVGKTMMQSGGTFGTFMAIGMGIRC
SIO_010081: ROMO1
subclass of: SO_0000673
so part of: ROMO1
location: complement(join(328080..328188,329704..329834))
location: region:328080-329834:-1
so has part: feature:329704-329834:-1:exon
so has part: feature:328080-328188:-1:exon

XP_005056984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:329704-329834:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328080-328188:-1:exon

NFS1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NFS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <330804..344882
location: region:330804-344882:1
so has part: feature:330804-344882:1:exon
subclass of: SO_0000010

101821352
type: Gene
SIO_000068: ncbigene

position:330804:1
position: 330804
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:344882:1
position: 344882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330804-344882:1:exon

NFS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NFS1
product: NFS1 cysteine desulfurase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005056979.2
SIO_010081: NFS1
subclass of: SO_0000673
so part of: NFS1
location: join(<330804..330875,331536..331652,332970..333053,333740..333892,334825..334918,337445..337579,338939..339096,340493..340598,340767..340848,342230..342313,342441..342530,343140..344882)
location: region:330804-344882:1
so has part: feature:330804-330875:1:exon
so has part: feature:331536-331652:1:exon
so has part: feature:332970-333053:1:exon
so has part: feature:333740-333892:1:exon
so has part: feature:334825-334918:1:exon
so has part: feature:337445-337579:1:exon
so has part: feature:338939-339096:1:exon
so has part: feature:340493-340598:1:exon
so has part: feature:340767-340848:1:exon
so has part: feature:342230-342313:1:exon
so has part: feature:342441-342530:1:exon
so has part: feature:343140-344882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330804-330875:1:exon

position:330875:1
position: 330875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:331536-331652:1:exon

position:331536:1
position: 331536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331652:1
position: 331652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:332970-333053:1:exon

position:332970:1
position: 332970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333053:1
position: 333053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333740-333892:1:exon

position:333740:1
position: 333740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333892:1
position: 333892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334825-334918:1:exon

position:334825:1
position: 334825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334918:1
position: 334918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:337445-337579:1:exon

position:337445:1
position: 337445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337579:1
position: 337579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:338939-339096:1:exon

position:338939:1
position: 338939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339096:1
position: 339096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:340493-340598:1:exon

position:340493:1
position: 340493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340598:1
position: 340598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:340767-340848:1:exon

position:340767:1
position: 340767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340848:1
position: 340848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:342230-342313:1:exon

position:342230:1
position: 342230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342313:1
position: 342313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:342441-342530:1:exon

position:342441:1
position: 342441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342530:1
position: 342530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:343140-344882:1:exon

position:343140:1
position: 343140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NFS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine desulfurase, mitochondrial
translation: SERSSDGSGAPRPLYMDVQATTPLDPRVLDSMLPYLTAYYGNPHSRTHAYGWESEAAMENARRQVANLIGADSREIIFTSGATESNNMAIKGVARFYKSRKKHIITTQTEHKCVLDSCRSLETEGFRITYLPVKKNGLIDLKELEAAFQPDTSLVSVMTVNNEIGVKQPIYDIGEICRARKVFFHTDAAQAIGKIPMDVNNMKIDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLQSGGGQERGLRSGTVPTPLAVGLGAACEVAQHEMEYDHKRISQLAERLVTKIMSEVPDVVMNGDQEHRYPGCINLSFAYVEGESLLMALKDVALSSGSACTSASLEPSYVLRAIGTDEDLAHSSIRFGIGRFTTEEEVDYTVQKCIQHVKRLREMSPLWEMVQDGIDLKSIKWTQH
SIO_010081: NFS1
subclass of: SO_0000673
so part of: NFS1
location: join(<330804..330875,331536..331652,332970..333053,333740..333892,334825..334918,337445..337579,338939..339096,340493..340598,340767..340848,342230..342313,342441..342530,343140..343203)
location: region:330804-343203:1
so has part: feature:330804-330875:1:exon
so has part: feature:331536-331652:1:exon
so has part: feature:332970-333053:1:exon
so has part: feature:333740-333892:1:exon
so has part: feature:334825-334918:1:exon
so has part: feature:337445-337579:1:exon
so has part: feature:338939-339096:1:exon
so has part: feature:340493-340598:1:exon
so has part: feature:340767-340848:1:exon
so has part: feature:342230-342313:1:exon
so has part: feature:342441-342530:1:exon
so has part: feature:343140-343203:1:exon

XP_005057036.1
type: Protein
SIO_000068: ncbiprotein

position:343203:1
position: 343203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330804-330875:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:331536-331652:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:332970-333053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333740-333892:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334825-334918:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:337445-337579:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338939-339096:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:340493-340598:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340767-340848:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:342230-342313:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:342441-342530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:343140-343203:1:exon

RBM12
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RBM12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 353013..362118
location: region:353013-362118:1
so has part: feature:353013-362118:1:exon
subclass of: SO_0000010

107604099
type: Gene
SIO_000068: ncbigene

position:353013:1
position: 353013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362118:1
position: 362118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353013-362118:1:exon

RBM12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RBM12
product: RNA binding motif protein 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303199.1
SIO_010081: RBM12
subclass of: SO_0000673
so part of: RBM12
location: join(353013..353106,357553..362118)
location: region:353013-362118:1
so has part: feature:353013-353106:1:exon
so has part: feature:357553-362118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353013-353106:1:exon

position:353106:1
position: 353106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:357553-362118:1:exon

position:357553:1
position: 357553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPNE1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 353031..397969
location: region:353031-397969:1
so has part: feature:353031-397969:1:exon
subclass of: SO_0000010

101812920
type: Gene
SIO_000068: ncbigene

position:353031:1
position: 353031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397969:1
position: 397969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353031-397969:1:exon

CPNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CPNE1
product: copine 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005056929.2
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(353031..353106,376177..376305,376739..376918,377707..377790,377999..378070,378719..378802,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..397969)
location: region:353031-397969:1
so has part: feature:353031-353106:1:exon
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377790:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:378719-378802:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-397969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353031-353106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376177-376305:1:exon

position:376177:1
position: 376177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376305:1
position: 376305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:376739-376918:1:exon

position:376739:1
position: 376739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376918:1
position: 376918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:377707-377790:1:exon

position:377707:1
position: 377707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377790:1
position: 377790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:377999-378070:1:exon

position:377999:1
position: 377999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378070:1
position: 378070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:378719-378802:1:exon

position:378719:1
position: 378719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378802:1
position: 378802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:379253-379342:1:exon

position:379253:1
position: 379253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379342:1
position: 379342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:383995-384093:1:exon

position:383995:1
position: 383995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384093:1
position: 384093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:385073-385159:1:exon

position:385073:1
position: 385073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385159:1
position: 385159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:385241-385300:1:exon

position:385241:1
position: 385241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385300:1
position: 385300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:385743-385876:1:exon

position:385743:1
position: 385743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385876:1
position: 385876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:386480-386534:1:exon

position:386480:1
position: 386480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386534:1
position: 386534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:386614-386665:1:exon

position:386614:1
position: 386614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386665:1
position: 386665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:392543-392676:1:exon

position:392543:1
position: 392543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392676:1
position: 392676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:395908-396144:1:exon

position:395908:1
position: 395908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396144:1
position: 396144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:396840-397969:1:exon

position:396840:1
position: 396840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CPNE1
product: copine 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016303200.1
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(353031..353106,376177..376305,376739..376918,377707..377790,377999..378070,378719..378802,379253..379342,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..397969)
location: region:353031-397969:1
so has part: feature:353031-353106:1:exon
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377790:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:378719-378802:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-397969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353031-353106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377707-377790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378719-378802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:396840-397969:1:exon

CPNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CPNE1
product: copine 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005056932.2
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(353031..353106,376177..376305,376739..376918,377707..377790,377999..378070,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..397969)
location: region:353031-397969:1
so has part: feature:353031-353106:1:exon
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377790:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-397969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353031-353106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377707-377790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383995-384093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:396840-397969:1:exon

CPNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CPNE1
product: copine 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005056931.2
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(353031..353106,376177..376305,376739..376918,377707..377781,377999..378070,378719..378802,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..397969)
location: region:353031-397969:1
so has part: feature:353031-353106:1:exon
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377781:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:378719-378802:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-397969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353031-353106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377707-377781:1:exon

position:377781:1
position: 377781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378719-378802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:383995-384093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:396840-397969:1:exon

CPNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CPNE1
product: copine 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005056933.2
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(353031..353106,376177..376305,376739..376918,377707..377781,377999..378070,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..397969)
location: region:353031-397969:1
so has part: feature:353031-353106:1:exon
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377781:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-397969:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353031-353106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377707-377781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383995-384093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:396840-397969:1:exon

RBM12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RBM12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 12
translation: MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRTGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDMPPANASRSGPPPSSGMSGRVNLPTTVPNFSNPSPSVVTASTTVHESNKNISTFSTASIGTAPPNLGSTFGSPTFSSTIPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPPVPPMTPLPPISGMPPMNPPPVAPLPTGMNGSGAAVNMNSGLNPLFIGPMNPVNPIQMNSQGSVKPIPINPDDLYVSVHGMPFTATESDVKDFFLGLRVDAIHMLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQTMGPSGQAHPPPQPHPRSKSPTGQKRSRSRSPHEHGFCVYLKGLPFESENKHVIDFFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIDVIRKRLQNFSYDQREILMNAEGESGLPKLCAHISNIPYNITKIEILQFLEGLAVEENSVQILVDNNGQGLGQALVQFKAEDDARKAERLHRKKLNGRDVNLRLITVEEMRDIERNPPSQGKKILKIPMQGSAAVPGAQGPAGDEHAFLGGNAKEANNGPPFNFPGNFSGSGTFGPPLPPPGIGGFPDSRPGIPTVAASGLPGASIEVPGFAGGPANLSGPAGFAGGPQTFGNGPGNLGGPPAFGAGPPAIASGLGHLSGPPGFGPGPGNIHIGGPPGFGTGSGKPGPTVIKVQNMPFTVSVDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEAMAAVVDLNDRPIGSRKVKLVLG
SIO_010081: RBM12
subclass of: SO_0000673
so part of: RBM12
location: 357574..360213
location: region:357574-360213:1
so has part: feature:357574-360213:1:exon

XP_016158685.1
type: Protein
SIO_000068: ncbiprotein

position:357574:1
position: 357574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360213:1
position: 360213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357574-360213:1:exon

CPNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CPNE1
product: copine 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005056930.1
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(357616..357694,376177..376305,376739..376918,377707..377790,377999..378070,378719..378802,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..397969)
location: region:357616-397969:1
so has part: feature:357616-357694:1:exon
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377790:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:378719-378802:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-397969:1:exon

position:357616:1
position: 357616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357616-357694:1:exon

position:357694:1
position: 357694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377707-377790:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:378719-378802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:383995-384093:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:396840-397969:1:exon

CPNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-1 isoform X1
translation: MAACVSRVELSVSCRSLLARDLGSRSDPLCVLLQDAGGGRWAELDRTEKIKNCQDPEFCKKLIVDYYFEKVQKLKFGVYDIDNESFDLNDDDYLGGIECTLGQVVSSSVFTKPLELKQGKPAGKGTITVDKISAEEIKDTRVVHLEIEAQNLDKKDLFGTSDPFLEFYRQSDAGTWQLVYRSEVIKNNLNPCWRKFSVPLQTFCGGDFNKPIKVHCADHDRDGSHDLIGAAETSLAQMQPAAAGSLVEYECIHPEKKQKKKNYKNSGIIRIKSCKIETEYSFLDYVMGGCQINFTVGVDFTASNGDPKSPDSLHYISPDGINEYLIAIWSVGSVVQDYDTDKLFPAFGFGAQVPPSWQVSHEFALNFNPSNPYCQGIQGIVDAYRQTLPQIRLYGPTNFSPIINHVARFAAHSLQQGAAAQYFILLIITDGEITDLDQTRQAIVNASKLPMSIIIVGVGEADFQAMEFLDGDSGVLKSVTGEPAARDIVQFVPFRQFKNAPQEALSQMVLAEVPKQLVSFYKWQGWPPLKLPEVKALQIQASPGYL
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(376177..376305,376739..376918,377707..377790,377999..378070,378719..378802,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..396983)
location: region:376177-396983:1
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377790:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:378719-378802:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-396983:1:exon

XP_005056986.1
type: Protein
SIO_000068: ncbiprotein

position:396983:1
position: 396983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377707-377790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378719-378802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383995-384093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:396840-396983:1:exon

CPNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-1 isoform X1
translation: MAACVSRVELSVSCRSLLARDLGSRSDPLCVLLQDAGGGRWAELDRTEKIKNCQDPEFCKKLIVDYYFEKVQKLKFGVYDIDNESFDLNDDDYLGGIECTLGQVVSSSVFTKPLELKQGKPAGKGTITVDKISAEEIKDTRVVHLEIEAQNLDKKDLFGTSDPFLEFYRQSDAGTWQLVYRSEVIKNNLNPCWRKFSVPLQTFCGGDFNKPIKVHCADHDRDGSHDLIGAAETSLAQMQPAAAGSLVEYECIHPEKKQKKKNYKNSGIIRIKSCKIETEYSFLDYVMGGCQINFTVGVDFTASNGDPKSPDSLHYISPDGINEYLIAIWSVGSVVQDYDTDKLFPAFGFGAQVPPSWQVSHEFALNFNPSNPYCQGIQGIVDAYRQTLPQIRLYGPTNFSPIINHVARFAAHSLQQGAAAQYFILLIITDGEITDLDQTRQAIVNASKLPMSIIIVGVGEADFQAMEFLDGDSGVLKSVTGEPAARDIVQFVPFRQFKNAPQEALSQMVLAEVPKQLVSFYKWQGWPPLKLPEVKALQIQASPGYL
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(376177..376305,376739..376918,377707..377790,377999..378070,378719..378802,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..396983)
location: region:376177-396983:1
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377790:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:378719-378802:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-396983:1:exon

XP_005056987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377707-377790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378719-378802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383995-384093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:396840-396983:1:exon

CPNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-1 isoform X5
translation: MAACVSRVELSVSCRSLLARDLGSRSDPLCVLLQDAGGGRWAELDRTEKIKNCQDPEFCKKLIVDYYFEKVQKLKFGVYDIDNESFDLNDDDYLGGIECTLGQVVSSSVFTKPLELKQGKPAGKGTITVDKISAEEIKDTRVVHLEIEAQNLDKKDLFGTSDPFLEFYRQSDAGTWQLVYRSEVIKNNLNPCWRKFSVPLQTFCGGDFNKPIKVEYECIHPEKKQKKKNYKNSGIIRIKSCKIETEYSFLDYVMGGCQINFTVGVDFTASNGDPKSPDSLHYISPDGINEYLIAIWSVGSVVQDYDTDKLFPAFGFGAQVPPSWQVSHEFALNFNPSNPYCQGIQGIVDAYRQTLPQIRLYGPTNFSPIINHVARFAAHSLQQGAAAQYFILLIITDGEITDLDQTRQAIVNASKLPMSIIIVGVGEADFQAMEFLDGDSGVLKSVTGEPAARDIVQFVPFRQFKNAPQEALSQMVLAEVPKQLVSFYKWQGWPPLKLPEVKALQIQASPGYL
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(376177..376305,376739..376918,377707..377790,377999..378070,378719..378802,379253..379342,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..396983)
location: region:376177-396983:1
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377790:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:378719-378802:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-396983:1:exon

XP_016158686.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377707-377790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378719-378802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:396840-396983:1:exon

CPNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-1 isoform X3
translation: MAACVSRVELSVSCRSLLARDLGSRSDPLCVLLQDAGGGRWAELDRTEKIKNCQDPEFCKKLIVDYYFEKVQKLKFGVYDIDNESFDLNDDDYLGGIECTLGQVVSSSVFTKPLELKQGKPAGKGTITVDKISAEEIKDTRVVHLEIEAQNLDKKVIKNNLNPCWRKFSVPLQTFCGGDFNKPIKVHCADHDRDGSHDLIGAAETSLAQMQPAAAGSLVEYECIHPEKKQKKKNYKNSGIIRIKSCKIETEYSFLDYVMGGCQINFTVGVDFTASNGDPKSPDSLHYISPDGINEYLIAIWSVGSVVQDYDTDKLFPAFGFGAQVPPSWQVSHEFALNFNPSNPYCQGIQGIVDAYRQTLPQIRLYGPTNFSPIINHVARFAAHSLQQGAAAQYFILLIITDGEITDLDQTRQAIVNASKLPMSIIIVGVGEADFQAMEFLDGDSGVLKSVTGEPAARDIVQFVPFRQFKNAPQEALSQMVLAEVPKQLVSFYKWQGWPPLKLPEVKALQIQASPGYL
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(376177..376305,376739..376918,377707..377790,377999..378070,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..396983)
location: region:376177-396983:1
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377790:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-396983:1:exon

XP_005056989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377707-377790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:383995-384093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:396840-396983:1:exon

CPNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-1 isoform X2
translation: MAACVSRVELSVSCRSLLARDLGSRSDPLCVLLQDAGGGRWAELDRTEKIKNCQDPEFCKKLIVDYYFEKVQKLKFGVYDIDNESFDLNDDDYLGGIECTLGQVVSSSVFTKPLELKQGKPAGKGTITISAEEIKDTRVVHLEIEAQNLDKKDLFGTSDPFLEFYRQSDAGTWQLVYRSEVIKNNLNPCWRKFSVPLQTFCGGDFNKPIKVHCADHDRDGSHDLIGAAETSLAQMQPAAAGSLVEYECIHPEKKQKKKNYKNSGIIRIKSCKIETEYSFLDYVMGGCQINFTVGVDFTASNGDPKSPDSLHYISPDGINEYLIAIWSVGSVVQDYDTDKLFPAFGFGAQVPPSWQVSHEFALNFNPSNPYCQGIQGIVDAYRQTLPQIRLYGPTNFSPIINHVARFAAHSLQQGAAAQYFILLIITDGEITDLDQTRQAIVNASKLPMSIIIVGVGEADFQAMEFLDGDSGVLKSVTGEPAARDIVQFVPFRQFKNAPQEALSQMVLAEVPKQLVSFYKWQGWPPLKLPEVKALQIQASPGYL
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(376177..376305,376739..376918,377707..377781,377999..378070,378719..378802,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..396983)
location: region:376177-396983:1
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377781:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:378719-378802:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-396983:1:exon

XP_005056988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377707-377781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378719-378802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:383995-384093:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:396840-396983:1:exon

CPNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-1 isoform X4
translation: MAACVSRVELSVSCRSLLARDLGSRSDPLCVLLQDAGGGRWAELDRTEKIKNCQDPEFCKKLIVDYYFEKVQKLKFGVYDIDNESFDLNDDDYLGGIECTLGQVVSSSVFTKPLELKQGKPAGKGTITISAEEIKDTRVVHLEIEAQNLDKKVIKNNLNPCWRKFSVPLQTFCGGDFNKPIKVHCADHDRDGSHDLIGAAETSLAQMQPAAAGSLVEYECIHPEKKQKKKNYKNSGIIRIKSCKIETEYSFLDYVMGGCQINFTVGVDFTASNGDPKSPDSLHYISPDGINEYLIAIWSVGSVVQDYDTDKLFPAFGFGAQVPPSWQVSHEFALNFNPSNPYCQGIQGIVDAYRQTLPQIRLYGPTNFSPIINHVARFAAHSLQQGAAAQYFILLIITDGEITDLDQTRQAIVNASKLPMSIIIVGVGEADFQAMEFLDGDSGVLKSVTGEPAARDIVQFVPFRQFKNAPQEALSQMVLAEVPKQLVSFYKWQGWPPLKLPEVKALQIQASPGYL
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(376177..376305,376739..376918,377707..377781,377999..378070,379253..379342,383995..384093,385073..385159,385241..385300,385743..385876,386480..386534,386614..386665,392543..392676,395908..396144,396840..396983)
location: region:376177-396983:1
so has part: feature:376177-376305:1:exon
so has part: feature:376739-376918:1:exon
so has part: feature:377707-377781:1:exon
so has part: feature:377999-378070:1:exon
so has part: feature:379253-379342:1:exon
so has part: feature:383995-384093:1:exon
so has part: feature:385073-385159:1:exon
so has part: feature:385241-385300:1:exon
so has part: feature:385743-385876:1:exon
so has part: feature:386480-386534:1:exon
so has part: feature:386614-386665:1:exon
so has part: feature:392543-392676:1:exon
so has part: feature:395908-396144:1:exon
so has part: feature:396840-396983:1:exon

XP_005056990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:376177-376305:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:376739-376918:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:377707-377781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:377999-378070:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:379253-379342:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:383995-384093:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:385073-385159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:385241-385300:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:385743-385876:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:386480-386534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:386614-386665:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:392543-392676:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395908-396144:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:396840-396983:1:exon

LOC101813775
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101813775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 405979..444289
location: region:405979-444289:1
so has part: feature:405979-444289:1:exon
subclass of: SO_0000010

101813775
type: Gene
SIO_000068: ncbigene

position:405979:1
position: 405979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444289:1
position: 444289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405979-444289:1:exon

LOC101813775
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101813775
product: fer-1-like protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303343.1
SIO_010081: LOC101813775
subclass of: SO_0000673
so part of: LOC101813775
location: join(405979..406057,406147..406202,407162..407250,409711..409810,411925..412016,412550..412591,412698..412862,413141..413201,414309..414440,414560..414622,415612..415696,415972..416131,416349..416532,417310..417496,417707..418071,418409..418517,419260..419458,420164..420284,420901..421001,421571..421658,422934..423050,424106..424258,424493..424670,425275..425399,425782..425916,427038..427211,427460..427576,427867..428028,428366..428525,429293..429396,429784..429915,430518..430566,431786..431892,432141..432272,432967..433077,433505..433632,434104..434274,435035..435189,437497..437672,438710..438795,439730..439828,440096..440337,442193..442461,443205..443305,443842..444289)
location: region:405979-444289:1
so has part: feature:405979-406057:1:exon
so has part: feature:406147-406202:1:exon
so has part: feature:407162-407250:1:exon
so has part: feature:409711-409810:1:exon
so has part: feature:411925-412016:1:exon
so has part: feature:412550-412591:1:exon
so has part: feature:412698-412862:1:exon
so has part: feature:413141-413201:1:exon
so has part: feature:414309-414440:1:exon
so has part: feature:414560-414622:1:exon
so has part: feature:415612-415696:1:exon
so has part: feature:415972-416131:1:exon
so has part: feature:416349-416532:1:exon
so has part: feature:417310-417496:1:exon
so has part: feature:417707-418071:1:exon
so has part: feature:418409-418517:1:exon
so has part: feature:419260-419458:1:exon
so has part: feature:420164-420284:1:exon
so has part: feature:420901-421001:1:exon
so has part: feature:421571-421658:1:exon
so has part: feature:422934-423050:1:exon
so has part: feature:424106-424258:1:exon
so has part: feature:424493-424670:1:exon
so has part: feature:425275-425399:1:exon
so has part: feature:425782-425916:1:exon
so has part: feature:427038-427211:1:exon
so has part: feature:427460-427576:1:exon
so has part: feature:427867-428028:1:exon
so has part: feature:428366-428525:1:exon
so has part: feature:429293-429396:1:exon
so has part: feature:429784-429915:1:exon
so has part: feature:430518-430566:1:exon
so has part: feature:431786-431892:1:exon
so has part: feature:432141-432272:1:exon
so has part: feature:432967-433077:1:exon
so has part: feature:433505-433632:1:exon
so has part: feature:434104-434274:1:exon
so has part: feature:435035-435189:1:exon
so has part: feature:437497-437672:1:exon
so has part: feature:438710-438795:1:exon
so has part: feature:439730-439828:1:exon
so has part: feature:440096-440337:1:exon
so has part: feature:442193-442461:1:exon
so has part: feature:443205-443305:1:exon
so has part: feature:443842-444289:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:405979-406057:1:exon

position:406057:1
position: 406057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:406147-406202:1:exon

position:406147:1
position: 406147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406202:1
position: 406202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:407162-407250:1:exon

position:407162:1
position: 407162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407250:1
position: 407250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:409711-409810:1:exon

position:409711:1
position: 409711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409810:1
position: 409810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:411925-412016:1:exon

position:411925:1
position: 411925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412016:1
position: 412016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:412550-412591:1:exon

position:412550:1
position: 412550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412591:1
position: 412591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:412698-412862:1:exon

position:412698:1
position: 412698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412862:1
position: 412862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:413141-413201:1:exon

position:413141:1
position: 413141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413201:1
position: 413201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:414309-414440:1:exon

position:414309:1
position: 414309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414440:1
position: 414440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:414560-414622:1:exon

position:414560:1
position: 414560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414622:1
position: 414622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:415612-415696:1:exon

position:415612:1
position: 415612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415696:1
position: 415696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:415972-416131:1:exon

position:415972:1
position: 415972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416131:1
position: 416131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:416349-416532:1:exon

position:416349:1
position: 416349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:416532:1
position: 416532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:417310-417496:1:exon

position:417310:1
position: 417310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417496:1
position: 417496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:417707-418071:1:exon

position:417707:1
position: 417707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418071:1
position: 418071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:418409-418517:1:exon

position:418409:1
position: 418409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418517:1
position: 418517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:419260-419458:1:exon

position:419260:1
position: 419260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419458:1
position: 419458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:420164-420284:1:exon

position:420164:1
position: 420164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:420284:1
position: 420284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:420901-421001:1:exon

position:420901:1
position: 420901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421001:1
position: 421001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:421571-421658:1:exon

position:421571:1
position: 421571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:421658:1
position: 421658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:422934-423050:1:exon

position:422934:1
position: 422934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:423050:1
position: 423050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:424106-424258:1:exon

position:424106:1
position: 424106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424258:1
position: 424258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:424493-424670:1:exon

position:424493:1
position: 424493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424670:1
position: 424670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:425275-425399:1:exon

position:425275:1
position: 425275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425399:1
position: 425399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:425782-425916:1:exon

position:425782:1
position: 425782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425916:1
position: 425916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:427038-427211:1:exon

position:427038:1
position: 427038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427211:1
position: 427211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:427460-427576:1:exon

position:427460:1
position: 427460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427576:1
position: 427576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:427867-428028:1:exon

position:427867:1
position: 427867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428028:1
position: 428028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:428366-428525:1:exon

position:428366:1
position: 428366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428525:1
position: 428525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:429293-429396:1:exon

position:429293:1
position: 429293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429396:1
position: 429396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:429784-429915:1:exon

position:429784:1
position: 429784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429915:1
position: 429915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:430518-430566:1:exon

position:430518:1
position: 430518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430566:1
position: 430566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:431786-431892:1:exon

position:431786:1
position: 431786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431892:1
position: 431892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:432141-432272:1:exon

position:432141:1
position: 432141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432272:1
position: 432272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:432967-433077:1:exon

position:432967:1
position: 432967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433077:1
position: 433077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:433505-433632:1:exon

position:433505:1
position: 433505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:433632:1
position: 433632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:434104-434274:1:exon

position:434104:1
position: 434104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434274:1
position: 434274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:435035-435189:1:exon

position:435035:1
position: 435035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435189:1
position: 435189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:437497-437672:1:exon

position:437497:1
position: 437497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437672:1
position: 437672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:438710-438795:1:exon

position:438710:1
position: 438710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438795:1
position: 438795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:439730-439828:1:exon

position:439730:1
position: 439730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439828:1
position: 439828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:440096-440337:1:exon

position:440096:1
position: 440096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:440337:1
position: 440337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:442193-442461:1:exon

position:442193:1
position: 442193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442461:1
position: 442461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:443205-443305:1:exon

position:443205:1
position: 443205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443305:1
position: 443305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:443842-444289:1:exon

position:443842:1
position: 443842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101813775
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101813775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fer-1-like protein 4
translation: MALSVAVRRLSQLPGHGERQVQLSFRGFTQKTRKVCCGPEAVFKELFRWPHYGKLAVGEMLSIKVYNCSKVFSNRLLGTLVLSLQHLMTSGRLILRESLVDKNNRVTGIYIELDLRYQPPNGSAGSWVEEDFIYLMKDSSDLIIHNPGFEQLETAECPRGKELDKKAAALGRKLAKGLGTDEEEEEEEDFYDTSEIEASGIIFSPVKSRSRLCSARDLFAIPTPQSFQVGINVIEAQKLVGVNINPFVVVKVGEEKRHTATQKSTNCPFYNEYFLFDFYEPRDVLFHRLIEISVFHSKKIPFLGTCIGTFKMDVETVYSQPDHRFFQKWAVISDPMDTQAGVKGFVKCNISVSARGDTVGFLPTYSRNQDVDIERNLLLPKRVPAERPWARVCIKLYRAEGLPSMGAGIMGGISKLIGERRVFIDPYVQVSFCGQQGETSVETSTTEPEWNEQISFIEMFPPLSRKIKVQVLDDANVGDVAIATHYIDLQEISDPDRNGFNPTFGPAWVNLYGSPQNSALRDVHKDLNEGMGEGIFYRGRILMAITVEIFSSPRAAERKLGDRTRGALKKLKLKKKSKKSKEKTKELSQLQGEEEAGGSQEAEQPREVTVEVEELHPLPENVLGRKEEFLLFAAFFEATMMDSSLISKPVSFEVSIGNYGKSEEAVTKGWQKAEKGEVKEERQPLLDAVSGGEMDAEILTPALGALNKSVTKSQRPEPMEYDKSYTCLPMRHEKPCVYVWSHWEDHAWRLCISNRIVKLAERLEQGLDDVEKLLRRPKAKAEERLRGVLEEFVAGCRQYSLSAERKTMAHPNNLDRCRTKYLMRNIILYAKQGLRVRRRMTRDNVKEKVKETRRILAKIRFMAKEPQCTLPDVLIWMLSNNRRVAYARIPAQNILYSVVEEEKGKDCAKIQTVFMKVPGLHTGEIFAKLEIYMWLGVTKYAKNCLAELPEEFLSQSEQEVAQLSAYSPPSWLSRDDFSYFQLRAHLYQARGILPADDNGLSDPFARVVFSTHCQTTRMLEETLSPMWNELLLFDQLIIDGKKEELKTETPIIIINLFSHNKFGSPEFLGQAFAVPQVKLVDEPYRKPALQFFDFYRGTKAAGELIATFELIELDYSGYLEPSVPEDVEPKEPGYLEDPRAGRFIIPEGIRPVLKEFRIEILFWGLRDLKRVNLFEVDEPQVIIECAGKKVESEVIVSYKENPNFIELVKYMDVELPEQVYLHPPLSIFVVEKRAFGRTVLVGSHVVSDVMKFSPRELEEEPEDVPKACNVSSHRPPSQTVVNIGLAASDPVSSTHPLSFVKAPLKKNPISKLVKKEEAYEEEKPELEELDWWSKYYASLKELYNQACSDEEDAENDDLNDADGGNLNASSIDMEAEDEAVIEAEPAQHKRKPIATLQIYNSELENEFGNFEDWLCIFPLHRGKANEDEDGNDDEHYVGKYKGSFYVYPAEEAAAEPKVSQGIPRNRPIKVLVRVYIVKATNLSPADPNGKADPYVVVTVGQQQKDTKERYIPKQLNPVFGEVVELTVSFPMESELTVAIFDHDLVGSDDLIGETKIDLENRFYSKHRANCGVAAQYDLNGYNMWRDAFKPTQILDSLCKKNSIPAAEYRWEEIKVDNKIFKVPPEAFPEEASVRNKREVADENLVDDEHKALYVLQHWEEMPGYGYKLVPEHVETRSLYNPESPGLVQGSLHMWIDMFPNDVPAPPPINIKPRLPVSYELRVIIWNTDDVILDDVNPVTGEPSSDIYVKSWIKGLDHDKQETDVHFNSLTGEGNFNWRFIFRFSYLPTEKEITYKKKDSVFSMEESEFREPPVLVLQVWDYDRISANDFLGSIELKLHDMVRAARSSEHCTVRMARENAAPRVSIFRNKRMRGWWPFIKLRDQEEKREEREYKKKKKWSSSVKPEDVELTDPSGNKYLLTGKVEAEIQLLTVEEADKSPVGLGRKGPEPLEKPNRPKTSFNWFVNPVKTFVFFIWKRYKRYIIMLIIVTALTIFLVLLVY…
SIO_010081: LOC101813775
subclass of: SO_0000673
so part of: LOC101813775
location: join(405979..406057,406147..406202,407162..407250,409711..409810,411925..412016,412550..412591,412698..412862,413141..413201,414309..414440,414560..414622,415612..415696,415972..416131,416349..416532,417310..417496,417707..418071,418409..418517,419260..419458,420164..420284,420901..421001,421571..421658,422934..423050,424106..424258,424493..424670,425275..425399,425782..425916,427038..427211,427460..427576,427867..428028,428366..428525,429293..429396,429784..429915,430518..430566,431786..431892,432141..432272,432967..433077,433505..433632,434104..434274,435035..435189,437497..437672,438710..438795,439730..439828,440096..440337,442193..442461,443205..443305,443842..444022)
location: region:405979-444022:1
so has part: feature:405979-406057:1:exon
so has part: feature:406147-406202:1:exon
so has part: feature:407162-407250:1:exon
so has part: feature:409711-409810:1:exon
so has part: feature:411925-412016:1:exon
so has part: feature:412550-412591:1:exon
so has part: feature:412698-412862:1:exon
so has part: feature:413141-413201:1:exon
so has part: feature:414309-414440:1:exon
so has part: feature:414560-414622:1:exon
so has part: feature:415612-415696:1:exon
so has part: feature:415972-416131:1:exon
so has part: feature:416349-416532:1:exon
so has part: feature:417310-417496:1:exon
so has part: feature:417707-418071:1:exon
so has part: feature:418409-418517:1:exon
so has part: feature:419260-419458:1:exon
so has part: feature:420164-420284:1:exon
so has part: feature:420901-421001:1:exon
so has part: feature:421571-421658:1:exon
so has part: feature:422934-423050:1:exon
so has part: feature:424106-424258:1:exon
so has part: feature:424493-424670:1:exon
so has part: feature:425275-425399:1:exon
so has part: feature:425782-425916:1:exon
so has part: feature:427038-427211:1:exon
so has part: feature:427460-427576:1:exon
so has part: feature:427867-428028:1:exon
so has part: feature:428366-428525:1:exon
so has part: feature:429293-429396:1:exon
so has part: feature:429784-429915:1:exon
so has part: feature:430518-430566:1:exon
so has part: feature:431786-431892:1:exon
so has part: feature:432141-432272:1:exon
so has part: feature:432967-433077:1:exon
so has part: feature:433505-433632:1:exon
so has part: feature:434104-434274:1:exon
so has part: feature:435035-435189:1:exon
so has part: feature:437497-437672:1:exon
so has part: feature:438710-438795:1:exon
so has part: feature:439730-439828:1:exon
so has part: feature:440096-440337:1:exon
so has part: feature:442193-442461:1:exon
so has part: feature:443205-443305:1:exon
so has part: feature:443842-444022:1:exon

XP_016158829.1
type: Protein
SIO_000068: ncbiprotein

position:444022:1
position: 444022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405979-406057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:406147-406202:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:407162-407250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409711-409810:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411925-412016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:412550-412591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:412698-412862:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:413141-413201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:414309-414440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:414560-414622:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415612-415696:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:415972-416131:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:416349-416532:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:417310-417496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:417707-418071:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:418409-418517:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:419260-419458:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:420164-420284:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:420901-421001:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:421571-421658:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:422934-423050:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:424106-424258:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:424493-424670:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:425275-425399:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:425782-425916:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:427038-427211:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:427460-427576:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:427867-428028:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:428366-428525:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:429293-429396:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:429784-429915:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:430518-430566:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:431786-431892:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:432141-432272:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:432967-433077:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:433505-433632:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:434104-434274:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:435035-435189:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:437497-437672:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:438710-438795:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:439730-439828:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:440096-440337:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:442193-442461:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:443205-443305:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:443842-444022:1:exon

ERGIC3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ERGIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(447794..465561)
location: region:447794-465561:-1
so has part: feature:447794-465561:-1:exon
subclass of: SO_0000010

101821551
type: Gene
SIO_000068: ncbigene

position:447794:-1
position: 447794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465561:-1
position: 465561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447794-465561:-1:exon

ERGIC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ERGIC3
product: ERGIC and golgi 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016303315.1
SIO_010081: ERGIC3
subclass of: SO_0000673
so part of: ERGIC3
location: complement(join(447794..448494,451065..451120,451959..452095,452892..452956,454614..454710,455333..455364,460281..460338,462007..462172,463325..463418,464671..464790,464909..464996,465458..465561))
location: region:447794-465561:-1
so has part: feature:465458-465561:-1:exon
so has part: feature:464909-464996:-1:exon
so has part: feature:464671-464790:-1:exon
so has part: feature:463325-463418:-1:exon
so has part: feature:462007-462172:-1:exon
so has part: feature:460281-460338:-1:exon
so has part: feature:455333-455364:-1:exon
so has part: feature:454614-454710:-1:exon
so has part: feature:452892-452956:-1:exon
so has part: feature:451959-452095:-1:exon
so has part: feature:451065-451120:-1:exon
so has part: feature:447794-448494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465458-465561:-1:exon

position:465458:-1
position: 465458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464909-464996:-1:exon

position:464909:-1
position: 464909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464996:-1
position: 464996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464671-464790:-1:exon

position:464671:-1
position: 464671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464790:-1
position: 464790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:463325-463418:-1:exon

position:463325:-1
position: 463325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463418:-1
position: 463418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:462007-462172:-1:exon

position:462007:-1
position: 462007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462172:-1
position: 462172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:460281-460338:-1:exon

position:460281:-1
position: 460281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460338:-1
position: 460338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:455333-455364:-1:exon

position:455333:-1
position: 455333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455364:-1
position: 455364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:454614-454710:-1:exon

position:454614:-1
position: 454614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454710:-1
position: 454710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:452892-452956:-1:exon

position:452892:-1
position: 452892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452956:-1
position: 452956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:451959-452095:-1:exon

position:451959:-1
position: 451959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452095:-1
position: 452095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:451065-451120:-1:exon

position:451065:-1
position: 451065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451120:-1
position: 451120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:447794-448494:-1:exon

position:448494:-1
position: 448494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERGIC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ERGIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum-Golgi intermediate compartment protein 3
translation: MVLLFFSELQYYLTKEVHPELYVDKSRGDKLKINLDVIFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKAGNRVTPEAERHELGKEEEKVFDPNSLDADRCESCYGAESEDIRCCNTCDDVREAYRRRGWAFKNPDSIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGRDYPGIVNPLDGTAITAQQASMMFQYFVKVVPTVYRKVDGEVVRTNQFSVTRHEKIANGLLGDQGLPGVFVLYELSPMMVKLTEKHRSFTHFLTGVCAIVGGIFTVAGFIDSLIYHSARAIQKKIELGKTT
SIO_010081: ERGIC3
subclass of: SO_0000673
so part of: ERGIC3
location: complement(join(448415..448494,451065..451120,451959..452095,452892..452956,454614..454710,455333..455364,460281..460338,462007..462172,463325..463418,464671..464790,464909..464996,465458..465505))
location: region:448415-465505:-1
so has part: feature:465458-465505:-1:exon
so has part: feature:464909-464996:-1:exon
so has part: feature:464671-464790:-1:exon
so has part: feature:463325-463418:-1:exon
so has part: feature:462007-462172:-1:exon
so has part: feature:460281-460338:-1:exon
so has part: feature:455333-455364:-1:exon
so has part: feature:454614-454710:-1:exon
so has part: feature:452892-452956:-1:exon
so has part: feature:451959-452095:-1:exon
so has part: feature:451065-451120:-1:exon
so has part: feature:448415-448494:-1:exon

XP_016158801.1
type: Protein
SIO_000068: ncbiprotein

position:448415:-1
position: 448415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465505:-1
position: 465505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465458-465505:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464909-464996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464671-464790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:463325-463418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462007-462172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460281-460338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455333-455364:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:454614-454710:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452892-452956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:451959-452095:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:451065-451120:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448415-448494:-1:exon

LOC107604083
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(467309..471910)
location: region:467309-471910:-1
so has part: feature:467309-471910:-1:exon
subclass of: SO_0000010

107604083
type: Gene
SIO_000068: ncbigene

position:467309:-1
position: 467309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471910:-1
position: 471910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467309-471910:-1:exon

LOC107604083
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604083
product: uncharacterized LOC107604083
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303118.1
SIO_010081: LOC107604083
subclass of: SO_0000673
so part of: LOC107604083
location: complement(join(467309..467652,469616..470237,470489..470578,470923..471090,471484..471910))
location: region:467309-471910:-1
so has part: feature:471484-471910:-1:exon
so has part: feature:470923-471090:-1:exon
so has part: feature:470489-470578:-1:exon
so has part: feature:469616-470237:-1:exon
so has part: feature:467309-467652:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471484-471910:-1:exon

position:471484:-1
position: 471484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:470923-471090:-1:exon

position:470923:-1
position: 470923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471090:-1
position: 471090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:470489-470578:-1:exon

position:470489:-1
position: 470489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470578:-1
position: 470578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:469616-470237:-1:exon

position:469616:-1
position: 469616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470237:-1
position: 470237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:467309-467652:-1:exon

position:467652:-1
position: 467652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107604083
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107604083
translation: MDSDLLDLPLGVKIHLKPKSKTVFCRGKLGETLNGPCPSFNLDDPYIHHPAPPVQYNRLHDPHLRDYHKRKDILRMLKRQGVITSDNKVVCTLKEFNEYRNYLTRLKLQLEKILRQQEEGLLPLLAKLKDGPKLPGTSDTSCRRKRRLQPQKPTCPCPQKSKETPLKSGRFRKVKIASDEGQTYSRAKLGTAADSQRKRHNTAHSLFKAVLRQLTAAEAQKLQELVEIIVYKVFVRLKVPRNQRINFLRNAAQGIRGSIFSSCRRTPLDRRQKIEMVAKELLAMVLEGLGYCLEPKASKPRRAVRWKEQPVDGRATLVDKSEEDEDTPRTLYPLHFPHSSTRIPTQDTPASCIPSYSPNIPPYIPCQTTPGPPSAPSRYSQIPLALPQDLPRTTCTWWWRATVPRIPPTEPPGSSPAPPSSGVPPMEDKGAGGWWKTME
SIO_010081: LOC107604083
subclass of: SO_0000673
so part of: LOC107604083
location: complement(join(467309..467652,469616..470237,470489..470578,470923..471090,471484..471579))
location: region:467309-471579:-1
so has part: feature:471484-471579:-1:exon
so has part: feature:470923-471090:-1:exon
so has part: feature:470489-470578:-1:exon
so has part: feature:469616-470237:-1:exon
so has part: feature:467309-467652:-1:exon

XP_016158604.1
type: Protein
SIO_000068: ncbiprotein

position:471579:-1
position: 471579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471484-471579:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470923-471090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:470489-470578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:469616-470237:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:467309-467652:-1:exon

ITCH
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ITCH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 508681..541133
location: region:508681-541133:1
so has part: feature:508681-541133:1:exon
subclass of: SO_0000010

101813986
type: Gene
SIO_000068: ncbigene

position:508681:1
position: 508681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541133:1
position: 541133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508681-541133:1:exon

ITCH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ITCH
product: itchy E3 ubiquitin protein ligase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005056935.1
SIO_010081: ITCH
subclass of: SO_0000673
so part of: ITCH
location: join(508681..508770,511184..511322,513155..513279,514503..514640,516716..516758,518776..518945,520062..520296,521515..521610,522860..523034,523892..523958,525437..525521,527011..527139,527766..527838,529437..529508,530153..530241,530926..531085,531369..531502,533680..533820,535537..535657,536595..536699,536888..536984,537352..537424,538079..541133)
location: region:508681-541133:1
so has part: feature:508681-508770:1:exon
so has part: feature:511184-511322:1:exon
so has part: feature:513155-513279:1:exon
so has part: feature:514503-514640:1:exon
so has part: feature:516716-516758:1:exon
so has part: feature:518776-518945:1:exon
so has part: feature:520062-520296:1:exon
so has part: feature:521515-521610:1:exon
so has part: feature:522860-523034:1:exon
so has part: feature:523892-523958:1:exon
so has part: feature:525437-525521:1:exon
so has part: feature:527011-527139:1:exon
so has part: feature:527766-527838:1:exon
so has part: feature:529437-529508:1:exon
so has part: feature:530153-530241:1:exon
so has part: feature:530926-531085:1:exon
so has part: feature:531369-531502:1:exon
so has part: feature:533680-533820:1:exon
so has part: feature:535537-535657:1:exon
so has part: feature:536595-536699:1:exon
so has part: feature:536888-536984:1:exon
so has part: feature:537352-537424:1:exon
so has part: feature:538079-541133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:508681-508770:1:exon

position:508770:1
position: 508770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:511184-511322:1:exon

position:511184:1
position: 511184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511322:1
position: 511322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513155-513279:1:exon

position:513155:1
position: 513155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513279:1
position: 513279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:514503-514640:1:exon

position:514503:1
position: 514503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514640:1
position: 514640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:516716-516758:1:exon

position:516716:1
position: 516716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516758:1
position: 516758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:518776-518945:1:exon

position:518776:1
position: 518776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518945:1
position: 518945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:520062-520296:1:exon

position:520062:1
position: 520062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520296:1
position: 520296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:521515-521610:1:exon

position:521515:1
position: 521515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521610:1
position: 521610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:522860-523034:1:exon

position:522860:1
position: 522860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523034:1
position: 523034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:523892-523958:1:exon

position:523892:1
position: 523892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523958:1
position: 523958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:525437-525521:1:exon

position:525437:1
position: 525437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525521:1
position: 525521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:527011-527139:1:exon

position:527011:1
position: 527011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527139:1
position: 527139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:527766-527838:1:exon

position:527766:1
position: 527766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527838:1
position: 527838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:529437-529508:1:exon

position:529437:1
position: 529437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529508:1
position: 529508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:530153-530241:1:exon

position:530153:1
position: 530153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530241:1
position: 530241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:530926-531085:1:exon

position:530926:1
position: 530926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531085:1
position: 531085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:531369-531502:1:exon

position:531369:1
position: 531369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531502:1
position: 531502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:533680-533820:1:exon

position:533680:1
position: 533680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533820:1
position: 533820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:535537-535657:1:exon

position:535537:1
position: 535537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535657:1
position: 535657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:536595-536699:1:exon

position:536595:1
position: 536595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536699:1
position: 536699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:536888-536984:1:exon

position:536888:1
position: 536888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536984:1
position: 536984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:537352-537424:1:exon

position:537352:1
position: 537352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537424:1
position: 537424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:538079-541133:1:exon

position:538079:1
position: 538079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ITCH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ITCH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase Itchy homolog
translation: MAGSGSRLGPASGLSMKSQLQITVISAKLKEKNKWFGPSPYVEVSVDGQSKKTEKCNNTNSPKWKQHLTVIVTPVSKLNFRVWSHQTLKSDVLLGSAALDIHETLKSNSMKLEQVVVTLHLVSDREPAEVVGDLSVCLDGMQVDPELLTNGEASSTRSPTQSESSRVRSDTRTNSNGLENCEDAASSENKTVNGSDSPLLTNGNGKPARPPRPARPPPPTPRRPPSVAASANGPSSASTESDGASAGSLAGTASNTPSEQSPEGATAATTAPATPALTTPPVLRQVQPVNPSPQALTTVSQGPLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPSWERRVDNMGRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDFSSTQNKEFDPLGPLPHGWEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSALDNGPQIAYVRDFKAKVHYFRFWCQQLAMPQHIKITVSRKTLFEDSFQQIMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKAVGLKDLESVDPEFYNSLIWVKENDIEECGLEMFFSVDKEILGEIKSHDLKPNGSNILVTEENKEDYIRLVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHTIYRHYTRTSRQIVWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKNYEQLKEKLLFAIEETEGFGQE
SIO_010081: ITCH
subclass of: SO_0000673
so part of: ITCH
location: join(508701..508770,511184..511322,513155..513279,514503..514640,516716..516758,518776..518945,520062..520296,521515..521610,522860..523034,523892..523958,525437..525521,527011..527139,527766..527838,529437..529508,530153..530241,530926..531085,531369..531502,533680..533820,535537..535657,536595..536699,536888..536984,537352..537424,538079..538178)
location: region:508701-538178:1
so has part: feature:508701-508770:1:exon
so has part: feature:511184-511322:1:exon
so has part: feature:513155-513279:1:exon
so has part: feature:514503-514640:1:exon
so has part: feature:516716-516758:1:exon
so has part: feature:518776-518945:1:exon
so has part: feature:520062-520296:1:exon
so has part: feature:521515-521610:1:exon
so has part: feature:522860-523034:1:exon
so has part: feature:523892-523958:1:exon
so has part: feature:525437-525521:1:exon
so has part: feature:527011-527139:1:exon
so has part: feature:527766-527838:1:exon
so has part: feature:529437-529508:1:exon
so has part: feature:530153-530241:1:exon
so has part: feature:530926-531085:1:exon
so has part: feature:531369-531502:1:exon
so has part: feature:533680-533820:1:exon
so has part: feature:535537-535657:1:exon
so has part: feature:536595-536699:1:exon
so has part: feature:536888-536984:1:exon
so has part: feature:537352-537424:1:exon
so has part: feature:538079-538178:1:exon

XP_005056992.1
type: Protein
SIO_000068: ncbiprotein

position:508701:1
position: 508701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538178:1
position: 538178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508701-508770:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511184-511322:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513155-513279:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:514503-514640:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:516716-516758:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:518776-518945:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520062-520296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521515-521610:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522860-523034:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:523892-523958:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525437-525521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527011-527139:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:527766-527838:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:529437-529508:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:530153-530241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:530926-531085:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531369-531502:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:533680-533820:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:535537-535657:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:536595-536699:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:536888-536984:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:537352-537424:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:538079-538178:1:exon

DYNLRB1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DYNLRB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 544292..549928
location: region:544292-549928:1
so has part: feature:544292-549928:1:exon
subclass of: SO_0000010

101814432
type: Gene
SIO_000068: ncbigene

position:544292:1
position: 544292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549928:1
position: 549928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544292-549928:1:exon

DYNLRB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DYNLRB1
product: dynein light chain roadblock-type 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005056939.2
SIO_010081: DYNLRB1
subclass of: SO_0000673
so part of: DYNLRB1
location: join(544292..544323,546751..546826,548127..548294,549431..549928)
location: region:544292-549928:1
so has part: feature:544292-544323:1:exon
so has part: feature:546751-546826:1:exon
so has part: feature:548127-548294:1:exon
so has part: feature:549431-549928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544292-544323:1:exon

position:544323:1
position: 544323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546751-546826:1:exon

position:546751:1
position: 546751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546826:1
position: 546826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548127-548294:1:exon

position:548127:1
position: 548127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548294:1
position: 548294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:549431-549928:1:exon

position:549431:1
position: 549431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DYNLRB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DYNLRB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynein light chain roadblock-type 1
translation: MAEVEETLKRIQSQKGVQGIIVVNSEGIPIKSTIDNSTTIQYAGLMHSFIMKARSTVRDIDPQNDLTFLRIRSKKNEIMVAPDKDYFLIVIQNPAE
SIO_010081: DYNLRB1
subclass of: SO_0000673
so part of: DYNLRB1
location: join(544321..544323,546751..546826,548127..548294,549431..549474)
location: region:544321-549474:1
so has part: feature:544321-544323:1:exon
so has part: feature:546751-546826:1:exon
so has part: feature:548127-548294:1:exon
so has part: feature:549431-549474:1:exon

XP_005056996.1
type: Protein
SIO_000068: ncbiprotein

position:544321:1
position: 544321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549474:1
position: 549474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544321-544323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546751-546826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548127-548294:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549431-549474:1:exon

MAP1LC3A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MAP1LC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 554118..571611
location: region:554118-571611:1
so has part: feature:554118-571611:1:exon
subclass of: SO_0000010

101814765
type: Gene
SIO_000068: ncbigene

position:554118:1
position: 554118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571611:1
position: 571611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554118-571611:1:exon

MAP1LC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MAP1LC3A
product: microtubule associated protein 1 light chain 3 alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005056941.2
SIO_010081: MAP1LC3A
subclass of: SO_0000673
so part of: MAP1LC3A
location: join(554118..554167,565118..565173,570734..570840,571358..571611)
location: region:554118-571611:1
so has part: feature:554118-554167:1:exon
so has part: feature:565118-565173:1:exon
so has part: feature:570734-570840:1:exon
so has part: feature:571358-571611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:554118-554167:1:exon

position:554167:1
position: 554167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565118-565173:1:exon

position:565118:1
position: 565118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565173:1
position: 565173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:570734-570840:1:exon

position:570734:1
position: 570734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570840:1
position: 570840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:571358-571611:1:exon

position:571358:1
position: 571358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP1LC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MAP1LC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated proteins 1A/1B light chain 3A isoform X2
translation: MVSLKTKRADRCKEVQQIREQHPNKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPISEIYEQEKDEDGFLYMVYASQETFGF
SIO_010081: MAP1LC3A
subclass of: SO_0000673
so part of: MAP1LC3A
location: join(554143..554167,565118..565173,570734..570840,571358..571520)
location: region:554143-571520:1
so has part: feature:554143-554167:1:exon
so has part: feature:565118-565173:1:exon
so has part: feature:570734-570840:1:exon
so has part: feature:571358-571520:1:exon

XP_005056998.1
type: Protein
SIO_000068: ncbiprotein

position:554143:1
position: 554143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571520:1
position: 571520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554143-554167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565118-565173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570734-570840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571358-571520:1:exon

MAP1LC3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MAP1LC3A
product: microtubule associated protein 1 light chain 3 alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005056940.2
SIO_010081: MAP1LC3A
subclass of: SO_0000673
so part of: MAP1LC3A
location: join(555693..555833,565118..565173,570734..570840,571358..571611)
location: region:555693-571611:1
so has part: feature:555693-555833:1:exon
so has part: feature:565118-565173:1:exon
so has part: feature:570734-570840:1:exon
so has part: feature:571358-571611:1:exon

position:555693:1
position: 555693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555693-555833:1:exon

position:555833:1
position: 555833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565118-565173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570734-570840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571358-571611:1:exon

MAP1LC3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MAP1LC3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated proteins 1A/1B light chain 3A isoform X1
translation: MPHALCDGCGDPEQSVLASSPSVKADRCKEVQQIREQHPNKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPISEIYEQEKDEDGFLYMVYASQETFGF
SIO_010081: MAP1LC3A
subclass of: SO_0000673
so part of: MAP1LC3A
location: join(555761..555833,565118..565173,570734..570840,571358..571520)
location: region:555761-571520:1
so has part: feature:555761-555833:1:exon
so has part: feature:565118-565173:1:exon
so has part: feature:570734-570840:1:exon
so has part: feature:571358-571520:1:exon

XP_005056997.1
type: Protein
SIO_000068: ncbiprotein

position:555761:1
position: 555761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555761-555833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565118-565173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:570734-570840:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:571358-571520:1:exon

LOC107604104
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(572105..573018)
location: region:572105-573018:-1
so has part: feature:572105-573018:-1:exon
subclass of: SO_0000011

107604104
type: Gene
SIO_000068: ncbigene

position:572105:-1
position: 572105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573018:-1
position: 573018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572105-573018:-1:exon

LOC107604104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107604104
product: uncharacterized LOC107604104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_001611935.1
SIO_010081: LOC107604104
subclass of: SO_0000673
so part of: LOC107604104
location: complement(join(572105..572881,572923..573018))
location: region:572105-573018:-1
so has part: feature:572923-573018:-1:exon
so has part: feature:572105-572881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572923-573018:-1:exon

position:572923:-1
position: 572923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:572105-572881:-1:exon

position:572881:-1
position: 572881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101821751
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101821751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(574576..581325)
location: region:574576-581325:-1
so has part: feature:574576-581325:-1:exon
subclass of: SO_0000010

101821751
type: Gene
SIO_000068: ncbigene

position:574576:-1
position: 574576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581325:-1
position: 581325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574576-581325:-1:exon

LOC101821751
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101821751
product: uncharacterized LOC101821751
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056981.1
SIO_010081: LOC101821751
subclass of: SO_0000673
so part of: LOC101821751
location: complement(join(574576..574743,577359..577796,578190..578324,581207..581325))
location: region:574576-581325:-1
so has part: feature:581207-581325:-1:exon
so has part: feature:578190-578324:-1:exon
so has part: feature:577359-577796:-1:exon
so has part: feature:574576-574743:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581207-581325:-1:exon

position:581207:-1
position: 581207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578190-578324:-1:exon

position:578190:-1
position: 578190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578324:-1
position: 578324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577359-577796:-1:exon

position:577359:-1
position: 577359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577796:-1
position: 577796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:574576-574743:-1:exon

position:574743:-1
position: 574743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101821751
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101821751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101821751
translation: MYTGILNVKYYSVSLWVDKFSLVQLGHRRPLLGATRLMGSDLLDLPLGVKIHLKPKSKTVFCRGKLGETLNGPCPSFNLDDPYIHHPAPPVQYNRLHDPHLRDYHKRKDILRMLKRQGVITSDNKVALGVGLIKNSPLQAGLPQPWLQPPAAVRGQGCALLSLGAEAAPTSPWQVPLLPFSACPTLPVQPWLGGHQWPQHQDMGGGLGGSSPPAGRIFKGLSQAQPHPKAERRAVLLRTLSPPCTHSFPDSLSLWRVPSPLPRPEHSTDR
SIO_010081: LOC101821751
subclass of: SO_0000673
so part of: LOC101821751
location: complement(join(574576..574743,577359..577796,578190..578324,581207..581278))
location: region:574576-581278:-1
so has part: feature:581207-581278:-1:exon
so has part: feature:578190-578324:-1:exon
so has part: feature:577359-577796:-1:exon
so has part: feature:574576-574743:-1:exon

XP_005057038.1
type: Protein
SIO_000068: ncbiprotein

position:581278:-1
position: 581278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581207-581278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:578190-578324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577359-577796:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574576-574743:-1:exon

PHF20
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PHF20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 584669..648249
location: region:584669-648249:1
so has part: feature:584669-648249:1:exon
subclass of: SO_0000010

101815092
type: Gene
SIO_000068: ncbigene

position:584669:1
position: 584669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648249:1
position: 648249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584669-648249:1:exon

PHF20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHF20
product: PHD finger protein 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016303251.1
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(584669..584716,586333..586381,590354..590402,592021..592149,596348..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610187,616152..616430,625745..625918,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..648249)
location: region:584669-648249:1
so has part: feature:584669-584716:1:exon
so has part: feature:586333-586381:1:exon
so has part: feature:590354-590402:1:exon
so has part: feature:592021-592149:1:exon
so has part: feature:596348-596462:1:exon
so has part: feature:602307-602478:1:exon
so has part: feature:602678-602762:1:exon
so has part: feature:603477-603556:1:exon
so has part: feature:607112-607499:1:exon
so has part: feature:607877-607984:1:exon
so has part: feature:609059-609244:1:exon
so has part: feature:610008-610187:1:exon
so has part: feature:616152-616430:1:exon
so has part: feature:625745-625918:1:exon
so has part: feature:630097-630195:1:exon
so has part: feature:631278-631439:1:exon
so has part: feature:633638-633807:1:exon
so has part: feature:636105-636204:1:exon
so has part: feature:639011-639206:1:exon
so has part: feature:641505-641904:1:exon
so has part: feature:643948-644131:1:exon
so has part: feature:645622-648249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584669-584716:1:exon

position:584716:1
position: 584716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586333-586381:1:exon

position:586333:1
position: 586333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586381:1
position: 586381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590354-590402:1:exon

position:590354:1
position: 590354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590402:1
position: 590402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:592021-592149:1:exon

position:592021:1
position: 592021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592149:1
position: 592149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:596348-596462:1:exon

position:596348:1
position: 596348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596462:1
position: 596462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:602307-602478:1:exon

position:602307:1
position: 602307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602478:1
position: 602478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:602678-602762:1:exon

position:602678:1
position: 602678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602762:1
position: 602762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:603477-603556:1:exon

position:603477:1
position: 603477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603556:1
position: 603556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:607112-607499:1:exon

position:607112:1
position: 607112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607499:1
position: 607499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:607877-607984:1:exon

position:607877:1
position: 607877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607984:1
position: 607984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:609059-609244:1:exon

position:609059:1
position: 609059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609244:1
position: 609244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:610008-610187:1:exon

position:610008:1
position: 610008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610187:1
position: 610187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:616152-616430:1:exon

position:616152:1
position: 616152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616430:1
position: 616430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:625745-625918:1:exon

position:625745:1
position: 625745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625918:1
position: 625918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:630097-630195:1:exon

position:630097:1
position: 630097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630195:1
position: 630195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:631278-631439:1:exon

position:631278:1
position: 631278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631439:1
position: 631439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:633638-633807:1:exon

position:633638:1
position: 633638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633807:1
position: 633807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:636105-636204:1:exon

position:636105:1
position: 636105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636204:1
position: 636204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:639011-639206:1:exon

position:639011:1
position: 639011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639206:1
position: 639206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:641505-641904:1:exon

position:641505:1
position: 641505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641904:1
position: 641904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:643948-644131:1:exon

position:643948:1
position: 643948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644131:1
position: 644131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:645622-648249:1:exon

position:645622:1
position: 645622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHF20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHF20
product: PHD finger protein 20, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016303253.1
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(584669..584716,586333..586381,590354..590402,592021..592149,596348..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610181,616152..616430,625745..625918,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..648249)
location: region:584669-648249:1
so has part: feature:584669-584716:1:exon
so has part: feature:586333-586381:1:exon
so has part: feature:590354-590402:1:exon
so has part: feature:592021-592149:1:exon
so has part: feature:596348-596462:1:exon
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urn:…
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urn:…
SIO_000300: 12
SIO_000628: feature:610008-610181:1:exon

position:610181:1
position: 610181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
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SIO_000300: 16
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SIO_000300: 17
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urn:…
SIO_000300: 18
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SIO_000300: 19
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SIO_000300: 21
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urn:…
SIO_000300: 22
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PHF20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHF20
product: PHD finger protein 20, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_016303254.1
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(584669..584716,586333..586381,590354..590402,592021..592149,596348..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610181,625745..625918,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..648249)
location: region:584669-648249:1
so has part: feature:584669-584716:1:exon
so has part: feature:586333-586381:1:exon
so has part: feature:590354-590402:1:exon
so has part: feature:592021-592149:1:exon
so has part: feature:596348-596462:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 5
SIO_000628: feature:596348-596462:1:exon

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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:603477-603556:1:exon

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SIO_000300: 9
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SIO_000300: 10
SIO_000628: feature:607877-607984:1:exon

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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:631278-631439:1:exon

urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:636105-636204:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:639011-639206:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:641505-641904:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:643948-644131:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:645622-648249:1:exon

PHF20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHF20
product: PHD finger protein 20, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_016303255.1
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(584669..584716,586333..586381,590354..590402,592021..592149,596348..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610181,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..648249)
location: region:584669-648249:1
so has part: feature:584669-584716:1:exon
so has part: feature:586333-586381:1:exon
so has part: feature:590354-590402:1:exon
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so has part: feature:607877-607984:1:exon
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so has part: feature:636105-636204:1:exon
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so has part: feature:641505-641904:1:exon
so has part: feature:643948-644131:1:exon
so has part: feature:645622-648249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:584669-584716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586333-586381:1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:592021-592149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596348-596462:1:exon

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SIO_000300: 6
SIO_000628: feature:602307-602478:1:exon

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SIO_000300: 7
SIO_000628: feature:602678-602762:1:exon

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SIO_000300: 8
SIO_000628: feature:603477-603556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607112-607499:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:607877-607984:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:609059-609244:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610008-610181:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:630097-630195:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:631278-631439:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:633638-633807:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:636105-636204:1:exon

urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
SIO_000628: feature:641505-641904:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:643948-644131:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:645622-648249:1:exon

PHF20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHF20
product: PHD finger protein 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016303252.1
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(584669..584716,586333..586381,590354..590402,596348..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610187,616152..616430,625745..625918,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..648249)
location: region:584669-648249:1
so has part: feature:584669-584716:1:exon
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so has part: feature:590354-590402:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:584669-584716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586333-586381:1:exon

urn:…
SIO_000300: 3
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SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:602678-602762:1:exon

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SIO_000628: feature:616152-616430:1:exon

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SIO_000628: feature:630097-630195:1:exon

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SIO_000628: feature:631278-631439:1:exon

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SIO_000300: 16
SIO_000628: feature:633638-633807:1:exon

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SIO_000628: feature:636105-636204:1:exon

urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
SIO_000628: feature:641505-641904:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:643948-644131:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:645622-648249:1:exon

PHF20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHF20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 20 isoform X1
translation: MTKHPPNRRGINFEVGAQLEARDRLKNWYPAHIEEIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEEGCAGFRINDQVLACWSDCRFYPAKVTSVNKDGTYTVKFYDGVVQTVKNIHVKAFSKDQNIVGDAKPKERGNEIPSSPENQEKFKEQRKATGSAKKDEDEKTLKTEKRVKQPDKEGKFIVISEKGKISEKNISKNGKEDKENISENDMEYSVDTQIEKKPENDKVKSPQENGKETKRKRGRPPVTPSTEPSSQTLQPITLELRCRKIPKGGDVPLKRPRIEKNLSVPAQEKSKNSSDNAERDQIRRRSSRLSSSISHEILNTDLVTTSTEIQTWKDAVPNQNESEKVQLEIPVEPDQSLGEQGSPANPSHSTALSPDASLQEEKAEDTESSSVPARTPEPSAATGSVTKPCRRTDFLASKKAATVDQDHKFRCKFLDCSKSFRKAKLLHYHMKYFHGVEKAAESQQNPVKRNIQTRASLASEKANQERSKRGRTTAGSLYAPPHIALRSTPYRDEKVERRRTSAPVSVLNSHRHSIRDQSRNHIARALRRPRERVQHAVKGHEKKKEKKSKDYGRSKSKKKKKKKKRSKPGYSGTGENTDTSQELSPEKSVVTKSNSSSKSSAHPSTLLHCTDSGQHKGKSKANEDDTLSESSMDSLPWSEDDCSQDVDVTTNPDEEVEESDFEMVRCVCEVKEENDFMIQCEECLCWQHGVCMGLLEDNIPEKYTCYICQDPPGQRSSLKYWYEKEWLSNGHMHGLGFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQNKEHPDLKLWCHPWKHITVDEKIHTKHIIHFEENCCKEETASYRTWNGTVEKPSTIPSVEESYITSEHCYQKPRAYYPAIEQRLVVETRGSAMDDGVNRIRENGDDTLSERFGWNLDQEICKMESESKHNYSKVRESVSKKVSPEEAIEMKLLEKDKEGVVNSQLQWQLNLLAHVESLQDEVIHRMDFIEKELDVLESWLDYTGELQPPEPLARLPQLKHCIKQLITDLGKVQQIALCCST
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(596380..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610187,616152..616430,625745..625918,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..645764)
location: region:596380-645764:1
so has part: feature:596380-596462:1:exon
so has part: feature:602307-602478:1:exon
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so has part: feature:609059-609244:1:exon
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so has part: feature:625745-625918:1:exon
so has part: feature:630097-630195:1:exon
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so has part: feature:641505-641904:1:exon
so has part: feature:643948-644131:1:exon
so has part: feature:645622-645764:1:exon

XP_016158737.1
type: Protein
SIO_000068: ncbiprotein

position:596380:1
position: 596380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645764:1
position: 645764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596380-596462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602307-602478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602678-602762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603477-603556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607112-607499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607877-607984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609059-609244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610008-610187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616152-616430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:625745-625918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630097-630195:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631278-631439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633638-633807:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:636105-636204:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:639011-639206:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:641505-641904:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:643948-644131:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:645622-645764:1:exon

PHF20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHF20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 20 isoform X1
translation: MTKHPPNRRGINFEVGAQLEARDRLKNWYPAHIEEIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEEGCAGFRINDQVLACWSDCRFYPAKVTSVNKDGTYTVKFYDGVVQTVKNIHVKAFSKDQNIVGDAKPKERGNEIPSSPENQEKFKEQRKATGSAKKDEDEKTLKTEKRVKQPDKEGKFIVISEKGKISEKNISKNGKEDKENISENDMEYSVDTQIEKKPENDKVKSPQENGKETKRKRGRPPVTPSTEPSSQTLQPITLELRCRKIPKGGDVPLKRPRIEKNLSVPAQEKSKNSSDNAERDQIRRRSSRLSSSISHEILNTDLVTTSTEIQTWKDAVPNQNESEKVQLEIPVEPDQSLGEQGSPANPSHSTALSPDASLQEEKAEDTESSSVPARTPEPSAATGSVTKPCRRTDFLASKKAATVDQDHKFRCKFLDCSKSFRKAKLLHYHMKYFHGVEKAAESQQNPVKRNIQTRASLASEKANQERSKRGRTTAGSLYAPPHIALRSTPYRDEKVERRRTSAPVSVLNSHRHSIRDQSRNHIARALRRPRERVQHAVKGHEKKKEKKSKDYGRSKSKKKKKKKKRSKPGYSGTGENTDTSQELSPEKSVVTKSNSSSKSSAHPSTLLHCTDSGQHKGKSKANEDDTLSESSMDSLPWSEDDCSQDVDVTTNPDEEVEESDFEMVRCVCEVKEENDFMIQCEECLCWQHGVCMGLLEDNIPEKYTCYICQDPPGQRSSLKYWYEKEWLSNGHMHGLGFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQNKEHPDLKLWCHPWKHITVDEKIHTKHIIHFEENCCKEETASYRTWNGTVEKPSTIPSVEESYITSEHCYQKPRAYYPAIEQRLVVETRGSAMDDGVNRIRENGDDTLSERFGWNLDQEICKMESESKHNYSKVRESVSKKVSPEEAIEMKLLEKDKEGVVNSQLQWQLNLLAHVESLQDEVIHRMDFIEKELDVLESWLDYTGELQPPEPLARLPQLKHCIKQLITDLGKVQQIALCCST
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(596380..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610187,616152..616430,625745..625918,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..645764)
location: region:596380-645764:1
so has part: feature:596380-596462:1:exon
so has part: feature:602307-602478:1:exon
so has part: feature:602678-602762:1:exon
so has part: feature:603477-603556:1:exon
so has part: feature:607112-607499:1:exon
so has part: feature:607877-607984:1:exon
so has part: feature:609059-609244:1:exon
so has part: feature:610008-610187:1:exon
so has part: feature:616152-616430:1:exon
so has part: feature:625745-625918:1:exon
so has part: feature:630097-630195:1:exon
so has part: feature:631278-631439:1:exon
so has part: feature:633638-633807:1:exon
so has part: feature:636105-636204:1:exon
so has part: feature:639011-639206:1:exon
so has part: feature:641505-641904:1:exon
so has part: feature:643948-644131:1:exon
so has part: feature:645622-645764:1:exon

XP_016158738.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596380-596462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602307-602478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602678-602762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603477-603556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607112-607499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607877-607984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609059-609244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610008-610187:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616152-616430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:625745-625918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630097-630195:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631278-631439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633638-633807:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:636105-636204:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:639011-639206:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:641505-641904:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:643948-644131:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:645622-645764:1:exon

PHF20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHF20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 20 isoform X2
translation: MTKHPPNRRGINFEVGAQLEARDRLKNWYPAHIEEIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEEGCAGFRINDQVLACWSDCRFYPAKVTSVNKDGTYTVKFYDGVVQTVKNIHVKAFSKDQNIVGDAKPKERGNEIPSSPENQEKFKEQRKATGSAKKDEDEKTLKTEKRVKQPDKEGKFIVISEKGKISEKNISKNGKEDKENISENDMEYSVDTQIEKKPENDKVKSPQENGKETKRKRGRPPVTPSTEPSSQTLQPITLELRCRKIPKGGDVPLKRPRIEKNLSVPAQEKSKNSSDNAERDQIRRRSSRLSSSISHEILNTDLVTTSTEIQTWKDAVPNQNESEKVQLEIPVEPDQSLGEQGSPANPSHSTALSPDASLQEEKAEDTESSSVPARTPEPSAATVTKPCRRTDFLASKKAATVDQDHKFRCKFLDCSKSFRKAKLLHYHMKYFHGVEKAAESQQNPVKRNIQTRASLASEKANQERSKRGRTTAGSLYAPPHIALRSTPYRDEKVERRRTSAPVSVLNSHRHSIRDQSRNHIARALRRPRERVQHAVKGHEKKKEKKSKDYGRSKSKKKKKKKKRSKPGYSGTGENTDTSQELSPEKSVVTKSNSSSKSSAHPSTLLHCTDSGQHKGKSKANEDDTLSESSMDSLPWSEDDCSQDVDVTTNPDEEVEESDFEMVRCVCEVKEENDFMIQCEECLCWQHGVCMGLLEDNIPEKYTCYICQDPPGQRSSLKYWYEKEWLSNGHMHGLGFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQNKEHPDLKLWCHPWKHITVDEKIHTKHIIHFEENCCKEETASYRTWNGTVEKPSTIPSVEESYITSEHCYQKPRAYYPAIEQRLVVETRGSAMDDGVNRIRENGDDTLSERFGWNLDQEICKMESESKHNYSKVRESVSKKVSPEEAIEMKLLEKDKEGVVNSQLQWQLNLLAHVESLQDEVIHRMDFIEKELDVLESWLDYTGELQPPEPLARLPQLKHCIKQLITDLGKVQQIALCCST
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(596380..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610181,616152..616430,625745..625918,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..645764)
location: region:596380-645764:1
so has part: feature:596380-596462:1:exon
so has part: feature:602307-602478:1:exon
so has part: feature:602678-602762:1:exon
so has part: feature:603477-603556:1:exon
so has part: feature:607112-607499:1:exon
so has part: feature:607877-607984:1:exon
so has part: feature:609059-609244:1:exon
so has part: feature:610008-610181:1:exon
so has part: feature:616152-616430:1:exon
so has part: feature:625745-625918:1:exon
so has part: feature:630097-630195:1:exon
so has part: feature:631278-631439:1:exon
so has part: feature:633638-633807:1:exon
so has part: feature:636105-636204:1:exon
so has part: feature:639011-639206:1:exon
so has part: feature:641505-641904:1:exon
so has part: feature:643948-644131:1:exon
so has part: feature:645622-645764:1:exon

XP_016158739.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596380-596462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602307-602478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602678-602762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603477-603556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607112-607499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607877-607984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609059-609244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610008-610181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:616152-616430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:625745-625918:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:630097-630195:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:631278-631439:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:633638-633807:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:636105-636204:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:639011-639206:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:641505-641904:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:643948-644131:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:645622-645764:1:exon

PHF20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHF20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 20 isoform X3
translation: MTKHPPNRRGINFEVGAQLEARDRLKNWYPAHIEEIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEEGCAGFRINDQVLACWSDCRFYPAKVTSVNKDGTYTVKFYDGVVQTVKNIHVKAFSKDQNIVGDAKPKERGNEIPSSPENQEKFKEQRKATGSAKKDEDEKTLKTEKRVKQPDKEGKFIVISEKGKISEKNISKNGKEDKENISENDMEYSVDTQIEKKPENDKVKSPQENGKETKRKRGRPPVTPSTEPSSQTLQPITLELRCRKIPKGGDVPLKRPRIEKNLSVPAQEKSKNSSDNAERDQIRRRSSRLSSSISHEILNTDLVTTSTEIQTWKDAVPNQNESEKVQLEIPVEPDQSLGEQGSPANPSHSTALSPDASLQEEKAEDTESSSVPARTPEPSAATDAPPHIALRSTPYRDEKVERRRTSAPVSVLNSHRHSIRDQSRNHIARALRRPRERVQHAVKGHEKKKEKKSKDYGRSKSKKKKKKKKRSKPGYSGTGENTDTSQELSPEKSVVTKSNSSSKSSAHPSTLLHCTDSGQHKGKSKANEDDTLSESSMDSLPWSEDDCSQDVDVTTNPDEEVEESDFEMVRCVCEVKEENDFMIQCEECLCWQHGVCMGLLEDNIPEKYTCYICQDPPGQRSSLKYWYEKEWLSNGHMHGLGFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQNKEHPDLKLWCHPWKHITVDEKIHTKHIIHFEENCCKEETASYRTWNGTVEKPSTIPSVEESYITSEHCYQKPRAYYPAIEQRLVVETRGSAMDDGVNRIRENGDDTLSERFGWNLDQEICKMESESKHNYSKVRESVSKKVSPEEAIEMKLLEKDKEGVVNSQLQWQLNLLAHVESLQDEVIHRMDFIEKELDVLESWLDYTGELQPPEPLARLPQLKHCIKQLITDLGKVQQIALCCST
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(596380..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610181,625745..625918,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..645764)
location: region:596380-645764:1
so has part: feature:596380-596462:1:exon
so has part: feature:602307-602478:1:exon
so has part: feature:602678-602762:1:exon
so has part: feature:603477-603556:1:exon
so has part: feature:607112-607499:1:exon
so has part: feature:607877-607984:1:exon
so has part: feature:609059-609244:1:exon
so has part: feature:610008-610181:1:exon
so has part: feature:625745-625918:1:exon
so has part: feature:630097-630195:1:exon
so has part: feature:631278-631439:1:exon
so has part: feature:633638-633807:1:exon
so has part: feature:636105-636204:1:exon
so has part: feature:639011-639206:1:exon
so has part: feature:641505-641904:1:exon
so has part: feature:643948-644131:1:exon
so has part: feature:645622-645764:1:exon

XP_016158740.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596380-596462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602307-602478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602678-602762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603477-603556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607112-607499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607877-607984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609059-609244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610008-610181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625745-625918:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:630097-630195:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:631278-631439:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:633638-633807:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:636105-636204:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:639011-639206:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:641505-641904:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:643948-644131:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:645622-645764:1:exon

PHF20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHF20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 20 isoform X4
translation: MTKHPPNRRGINFEVGAQLEARDRLKNWYPAHIEEIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEEGCAGFRINDQVLACWSDCRFYPAKVTSVNKDGTYTVKFYDGVVQTVKNIHVKAFSKDQNIVGDAKPKERGNEIPSSPENQEKFKEQRKATGSAKKDEDEKTLKTEKRVKQPDKEGKFIVISEKGKISEKNISKNGKEDKENISENDMEYSVDTQIEKKPENDKVKSPQENGKETKRKRGRPPVTPSTEPSSQTLQPITLELRCRKIPKGGDVPLKRPRIEKNLSVPAQEKSKNSSDNAERDQIRRRSSRLSSSISHEILNTDLVTTSTEIQTWKDAVPNQNESEKVQLEIPVEPDQSLGEQGSPANPSHSTALSPDASLQEEKAEDTESSSVPARTPEPSAATAVKGHEKKKEKKSKDYGRSKSKKKKKKKKRSKPGYSGTGENTDTSQELSPEKSVVTKSNSSSKSSAHPSTLLHCTDSGQHKGKSKANEDDTLSESSMDSLPWSEDDCSQDVDVTTNPDEEVEESDFEMVRCVCEVKEENDFMIQCEECLCWQHGVCMGLLEDNIPEKYTCYICQDPPGQRSSLKYWYEKEWLSNGHMHGLGFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQNKEHPDLKLWCHPWKHITVDEKIHTKHIIHFEENCCKEETASYRTWNGTVEKPSTIPSVEESYITSEHCYQKPRAYYPAIEQRLVVETRGSAMDDGVNRIRENGDDTLSERFGWNLDQEICKMESESKHNYSKVRESVSKKVSPEEAIEMKLLEKDKEGVVNSQLQWQLNLLAHVESLQDEVIHRMDFIEKELDVLESWLDYTGELQPPEPLARLPQLKHCIKQLITDLGKVQQIALCCST
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: join(596380..596462,602307..602478,602678..602762,603477..603556,607112..607499,607877..607984,609059..609244,610008..610181,630097..630195,631278..631439,633638..633807,636105..636204,639011..639206,641505..641904,643948..644131,645622..645764)
location: region:596380-645764:1
so has part: feature:596380-596462:1:exon
so has part: feature:602307-602478:1:exon
so has part: feature:602678-602762:1:exon
so has part: feature:603477-603556:1:exon
so has part: feature:607112-607499:1:exon
so has part: feature:607877-607984:1:exon
so has part: feature:609059-609244:1:exon
so has part: feature:610008-610181:1:exon
so has part: feature:630097-630195:1:exon
so has part: feature:631278-631439:1:exon
so has part: feature:633638-633807:1:exon
so has part: feature:636105-636204:1:exon
so has part: feature:639011-639206:1:exon
so has part: feature:641505-641904:1:exon
so has part: feature:643948-644131:1:exon
so has part: feature:645622-645764:1:exon

XP_016158741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596380-596462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602307-602478:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:602678-602762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603477-603556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:607112-607499:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607877-607984:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609059-609244:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:610008-610181:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:630097-630195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:631278-631439:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:633638-633807:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:636105-636204:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:639011-639206:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:641505-641904:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:643948-644131:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:645622-645764:1:exon

NDRG3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NDRG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(649917..678721)
location: region:649917-678721:-1
so has part: feature:649917-678721:-1:exon
subclass of: SO_0000010

101815293
type: Gene
SIO_000068: ncbigene

position:649917:-1
position: 649917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678721:-1
position: 678721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649917-678721:-1:exon

NDRG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NDRG3
product: NDRG family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005056948.2
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: complement(join(649917..651408,653713..653764,653855..653890,654517..654564,655893..655944,656398..656463,656837..656940,658120..658176,658721..658807,660354..660414,660739..660801,661302..661422,662063..662168,676214..676249,678617..678721))
location: region:649917-678721:-1
so has part: feature:678617-678721:-1:exon
so has part: feature:676214-676249:-1:exon
so has part: feature:662063-662168:-1:exon
so has part: feature:661302-661422:-1:exon
so has part: feature:660739-660801:-1:exon
so has part: feature:660354-660414:-1:exon
so has part: feature:658721-658807:-1:exon
so has part: feature:658120-658176:-1:exon
so has part: feature:656837-656940:-1:exon
so has part: feature:656398-656463:-1:exon
so has part: feature:655893-655944:-1:exon
so has part: feature:654517-654564:-1:exon
so has part: feature:653855-653890:-1:exon
so has part: feature:653713-653764:-1:exon
so has part: feature:649917-651408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678617-678721:-1:exon

position:678617:-1
position: 678617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:676214-676249:-1:exon

position:676214:-1
position: 676214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676249:-1
position: 676249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:662063-662168:-1:exon

position:662063:-1
position: 662063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:662168:-1
position: 662168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:661302-661422:-1:exon

position:661302:-1
position: 661302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661422:-1
position: 661422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:660739-660801:-1:exon

position:660739:-1
position: 660739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660801:-1
position: 660801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:660354-660414:-1:exon

position:660354:-1
position: 660354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660414:-1
position: 660414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:658721-658807:-1:exon

position:658721:-1
position: 658721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658807:-1
position: 658807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:658120-658176:-1:exon

position:658120:-1
position: 658120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658176:-1
position: 658176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:656837-656940:-1:exon

position:656837:-1
position: 656837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656940:-1
position: 656940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:656398-656463:-1:exon

position:656398:-1
position: 656398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656463:-1
position: 656463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:655893-655944:-1:exon

position:655893:-1
position: 655893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655944:-1
position: 655944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:654517-654564:-1:exon

position:654517:-1
position: 654517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654564:-1
position: 654564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:653855-653890:-1:exon

position:653855:-1
position: 653855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653890:-1
position: 653890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:653713-653764:-1:exon

position:653713:-1
position: 653713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653764:-1
position: 653764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:649917-651408:-1:exon

position:651408:-1
position: 651408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDRG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NDRG3
product: NDRG family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005056947.2
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: complement(join(649917..651408,651894..651932,653713..653764,653855..653890,654517..654564,655893..655944,656398..656463,656837..656940,658120..658176,658721..658807,660354..660414,660739..660801,661302..661422,662063..662168,676214..676249,678617..678721))
location: region:649917-678721:-1
so has part: feature:678617-678721:-1:exon
so has part: feature:676214-676249:-1:exon
so has part: feature:662063-662168:-1:exon
so has part: feature:661302-661422:-1:exon
so has part: feature:660739-660801:-1:exon
so has part: feature:660354-660414:-1:exon
so has part: feature:658721-658807:-1:exon
so has part: feature:658120-658176:-1:exon
so has part: feature:656837-656940:-1:exon
so has part: feature:656398-656463:-1:exon
so has part: feature:655893-655944:-1:exon
so has part: feature:654517-654564:-1:exon
so has part: feature:653855-653890:-1:exon
so has part: feature:653713-653764:-1:exon
so has part: feature:651894-651932:-1:exon
so has part: feature:649917-651408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678617-678721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676214-676249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662063-662168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661302-661422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660739-660801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660354-660414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658721-658807:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658120-658176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:656837-656940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656398-656463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655893-655944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654517-654564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653855-653890:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:653713-653764:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:651894-651932:-1:exon

position:651894:-1
position: 651894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651932:-1
position: 651932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:649917-651408:-1:exon

NDRG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NDRG3
product: NDRG family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005056945.2
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: complement(join(649917..651408,651894..651932,653713..653890,654517..654564,655893..655944,656398..656463,656837..656940,658120..658176,658721..658807,660354..660414,660739..660801,661302..661422,662063..662168,676214..676249,678617..678721))
location: region:649917-678721:-1
so has part: feature:678617-678721:-1:exon
so has part: feature:676214-676249:-1:exon
so has part: feature:662063-662168:-1:exon
so has part: feature:661302-661422:-1:exon
so has part: feature:660739-660801:-1:exon
so has part: feature:660354-660414:-1:exon
so has part: feature:658721-658807:-1:exon
so has part: feature:658120-658176:-1:exon
so has part: feature:656837-656940:-1:exon
so has part: feature:656398-656463:-1:exon
so has part: feature:655893-655944:-1:exon
so has part: feature:654517-654564:-1:exon
so has part: feature:653713-653890:-1:exon
so has part: feature:651894-651932:-1:exon
so has part: feature:649917-651408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:678617-678721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676214-676249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662063-662168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661302-661422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660739-660801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660354-660414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658721-658807:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658120-658176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:656837-656940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656398-656463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655893-655944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654517-654564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653713-653890:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651894-651932:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:649917-651408:-1:exon

NDRG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NDRG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG3 isoform X3
translation: MDELQDVQLTEIKPLLNDKNAARNFQDFDCQEHDIETAFGVVHVTMRGTAKGNRPVILTYHDIGLNHKSCFNAFFNFEDMQEITHHFAVCHVDAPGQQEGAPPFPSGYQYPSMDELAEMLPAVLTHLNLKSFIGIGLGAGAYVLSRCALSHPDLVEGLVLINVDPCAKGWIDWAASKFSGWTTNIVDIVLAHHFGHEELQANLDLIQTYRLHIAQDINQDNLQLFLTSYNSRKDLEIERPVVGVNETIAKTLKCPALLVVGDNSPAVEAVVECNSRLDPTKTTLLKMADCGGLPQVVQPGKLTEAFKYFVQGMGYMPAASMTRLMRSRSHSSSSVGSGESSRSRSHASTHGDGSAGTPEGIDLQAAPQTMEVSC
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: complement(join(651230..651408,653713..653764,653855..653890,654517..654564,655893..655944,656398..656463,656837..656940,658120..658176,658721..658807,660354..660414,660739..660801,661302..661422,662063..662168,676214..676249,678617..678673))
location: region:651230-678673:-1
so has part: feature:678617-678673:-1:exon
so has part: feature:676214-676249:-1:exon
so has part: feature:662063-662168:-1:exon
so has part: feature:661302-661422:-1:exon
so has part: feature:660739-660801:-1:exon
so has part: feature:660354-660414:-1:exon
so has part: feature:658721-658807:-1:exon
so has part: feature:658120-658176:-1:exon
so has part: feature:656837-656940:-1:exon
so has part: feature:656398-656463:-1:exon
so has part: feature:655893-655944:-1:exon
so has part: feature:654517-654564:-1:exon
so has part: feature:653855-653890:-1:exon
so has part: feature:653713-653764:-1:exon
so has part: feature:651230-651408:-1:exon

XP_005057005.1
type: Protein
SIO_000068: ncbiprotein

position:651230:-1
position: 651230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678673:-1
position: 678673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678617-678673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676214-676249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662063-662168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661302-661422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660739-660801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660354-660414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658721-658807:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658120-658176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:656837-656940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656398-656463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655893-655944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654517-654564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653855-653890:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:653713-653764:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:651230-651408:-1:exon

NDRG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NDRG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG3 isoform X2
translation: MDELQDVQLTEIKPLLNDKNAARNFQDFDCQEHDIETAFGVVHVTMRGTAKGNRPVILTYHDIGLNHKSCFNAFFNFEDMQEITHHFAVCHVDAPGQQEGAPPFPSGYQYPSMDELAEMLPAVLTHLNLKSFIGIGLGAGAYVLSRCALSHPDLVEGLVLINVDPCAKGWIDWAASKFSGWTTNIVDIVLAHHFGHEELQANLDLIQTYRLHIAQDINQDNLQLFLTSYNSRKDLEIERPVVGVNETIAKTLKCPALLVVGDNSPAVEAVVECNSRLDPTKTTLLKMADCGGLPQVVQPGKLTEAFKYFVQGMGYIPYVQLSHLSTESVPAASMTRLMRSRSHSSSSVGSGESSRSRSHASTHGDGSAGTPEGIDLQAAPQTMEVSC
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: complement(join(651230..651408,651894..651932,653713..653764,653855..653890,654517..654564,655893..655944,656398..656463,656837..656940,658120..658176,658721..658807,660354..660414,660739..660801,661302..661422,662063..662168,676214..676249,678617..678673))
location: region:651230-678673:-1
so has part: feature:678617-678673:-1:exon
so has part: feature:676214-676249:-1:exon
so has part: feature:662063-662168:-1:exon
so has part: feature:661302-661422:-1:exon
so has part: feature:660739-660801:-1:exon
so has part: feature:660354-660414:-1:exon
so has part: feature:658721-658807:-1:exon
so has part: feature:658120-658176:-1:exon
so has part: feature:656837-656940:-1:exon
so has part: feature:656398-656463:-1:exon
so has part: feature:655893-655944:-1:exon
so has part: feature:654517-654564:-1:exon
so has part: feature:653855-653890:-1:exon
so has part: feature:653713-653764:-1:exon
so has part: feature:651894-651932:-1:exon
so has part: feature:651230-651408:-1:exon

XP_005057004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:678617-678673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676214-676249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662063-662168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661302-661422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660739-660801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660354-660414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658721-658807:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658120-658176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:656837-656940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656398-656463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655893-655944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654517-654564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653855-653890:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:653713-653764:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:651894-651932:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:651230-651408:-1:exon

NDRG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NDRG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG3 isoform X1
translation: MDELQDVQLTEIKPLLNDKNAARNFQDFDCQEHDIETAFGVVHVTMRGTAKGNRPVILTYHDIGLNHKSCFNAFFNFEDMQEITHHFAVCHVDAPGQQEGAPPFPSGYQYPSMDELAEMLPAVLTHLNLKSFIGIGLGAGAYVLSRCALSHPDLVEGLVLINVDPCAKGWIDWAASKFSGWTTNIVDIVLAHHFGHEELQANLDLIQTYRLHIAQDINQDNLQLFLTSYNSRKDLEIERPVVGVNETIAKTLKCPALLVVGDNSPAVEAVVECNSRLDPTKTTLLKMADCGGLPQVVQVRHPLTLPWHLGAPEPFVLLALKPPSLFPQPGKLTEAFKYFVQGMGYIPYVQLSHLSTESVPAASMTRLMRSRSHSSSSVGSGESSRSRSHASTHGDGSAGTPEGIDLQAAPQTMEVSC
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: complement(join(651230..651408,651894..651932,653713..653890,654517..654564,655893..655944,656398..656463,656837..656940,658120..658176,658721..658807,660354..660414,660739..660801,661302..661422,662063..662168,676214..676249,678617..678673))
location: region:651230-678673:-1
so has part: feature:678617-678673:-1:exon
so has part: feature:676214-676249:-1:exon
so has part: feature:662063-662168:-1:exon
so has part: feature:661302-661422:-1:exon
so has part: feature:660739-660801:-1:exon
so has part: feature:660354-660414:-1:exon
so has part: feature:658721-658807:-1:exon
so has part: feature:658120-658176:-1:exon
so has part: feature:656837-656940:-1:exon
so has part: feature:656398-656463:-1:exon
so has part: feature:655893-655944:-1:exon
so has part: feature:654517-654564:-1:exon
so has part: feature:653713-653890:-1:exon
so has part: feature:651894-651932:-1:exon
so has part: feature:651230-651408:-1:exon

XP_005057002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:678617-678673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676214-676249:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:662063-662168:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:661302-661422:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660739-660801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:660354-660414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658721-658807:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658120-658176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:656837-656940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:656398-656463:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:655893-655944:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:654517-654564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:653713-653890:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:651894-651932:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:651230-651408:-1:exon

RALGAPB
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RALGAPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 716424..782928
location: region:716424-782928:1
so has part: feature:716424-782928:1:exon
subclass of: SO_0000010

101816273
type: Gene
SIO_000068: ncbigene

position:716424:1
position: 716424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782928:1
position: 782928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716424-782928:1:exon

RALGAPB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RALGAPB
product: Ral GTPase activating protein non-catalytic beta subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016303259.1
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: join(716424..716546,724589..724801,725466..725668,729702..729865,730500..730686,735662..735793,736934..737112,739407..739555,739666..739882,744565..744600,746388..746589,748068..748235,748992..749106,749343..749490,752326..752390,752553..752685,754674..754807,756817..756999,759607..759758,761434..761621,763758..763864,765783..765935,766557..766766,767705..767863,769782..769947,772657..772779,773494..773630,774421..774529,776880..776958,777289..777437,779046..782928)
location: region:716424-782928:1
so has part: feature:716424-716546:1:exon
so has part: feature:724589-724801:1:exon
so has part: feature:725466-725668:1:exon
so has part: feature:729702-729865:1:exon
so has part: feature:730500-730686:1:exon
so has part: feature:735662-735793:1:exon
so has part: feature:736934-737112:1:exon
so has part: feature:739407-739555:1:exon
so has part: feature:739666-739882:1:exon
so has part: feature:744565-744600:1:exon
so has part: feature:746388-746589:1:exon
so has part: feature:748068-748235:1:exon
so has part: feature:748992-749106:1:exon
so has part: feature:749343-749490:1:exon
so has part: feature:752326-752390:1:exon
so has part: feature:752553-752685:1:exon
so has part: feature:754674-754807:1:exon
so has part: feature:756817-756999:1:exon
so has part: feature:759607-759758:1:exon
so has part: feature:761434-761621:1:exon
so has part: feature:763758-763864:1:exon
so has part: feature:765783-765935:1:exon
so has part: feature:766557-766766:1:exon
so has part: feature:767705-767863:1:exon
so has part: feature:769782-769947:1:exon
so has part: feature:772657-772779:1:exon
so has part: feature:773494-773630:1:exon
so has part: feature:774421-774529:1:exon
so has part: feature:776880-776958:1:exon
so has part: feature:777289-777437:1:exon
so has part: feature:779046-782928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716424-716546:1:exon

position:716546:1
position: 716546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:724589-724801:1:exon

position:724589:1
position: 724589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:724801:1
position: 724801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725466-725668:1:exon

position:725466:1
position: 725466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725668:1
position: 725668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:729702-729865:1:exon

position:729702:1
position: 729702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729865:1
position: 729865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:730500-730686:1:exon

position:730500:1
position: 730500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730686:1
position: 730686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:735662-735793:1:exon

position:735662:1
position: 735662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735793:1
position: 735793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:736934-737112:1:exon

position:736934:1
position: 736934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737112:1
position: 737112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:739407-739555:1:exon

position:739407:1
position: 739407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739555:1
position: 739555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:739666-739882:1:exon

position:739666:1
position: 739666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739882:1
position: 739882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:744565-744600:1:exon

position:744565:1
position: 744565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744600:1
position: 744600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:746388-746589:1:exon

position:746388:1
position: 746388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746589:1
position: 746589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:748068-748235:1:exon

position:748068:1
position: 748068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:748235:1
position: 748235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:748992-749106:1:exon

position:748992:1
position: 748992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749106:1
position: 749106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:749343-749490:1:exon

position:749343:1
position: 749343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749490:1
position: 749490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:752326-752390:1:exon

position:752326:1
position: 752326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752390:1
position: 752390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:752553-752685:1:exon

position:752553:1
position: 752553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752685:1
position: 752685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:754674-754807:1:exon

position:754674:1
position: 754674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754807:1
position: 754807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:756817-756999:1:exon

position:756817:1
position: 756817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756999:1
position: 756999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:759607-759758:1:exon

position:759607:1
position: 759607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759758:1
position: 759758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:761434-761621:1:exon

position:761434:1
position: 761434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761621:1
position: 761621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:763758-763864:1:exon

position:763758:1
position: 763758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763864:1
position: 763864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:765783-765935:1:exon

position:765783:1
position: 765783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765935:1
position: 765935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:766557-766766:1:exon

position:766557:1
position: 766557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766766:1
position: 766766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:767705-767863:1:exon

position:767705:1
position: 767705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767863:1
position: 767863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:769782-769947:1:exon

position:769782:1
position: 769782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769947:1
position: 769947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:772657-772779:1:exon

position:772657:1
position: 772657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772779:1
position: 772779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:773494-773630:1:exon

position:773494:1
position: 773494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773630:1
position: 773630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:774421-774529:1:exon

position:774421:1
position: 774421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774529:1
position: 774529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:776880-776958:1:exon

position:776880:1
position: 776880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776958:1
position: 776958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:777289-777437:1:exon

position:777289:1
position: 777289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777437:1
position: 777437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:779046-782928:1:exon

position:779046:1
position: 779046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RALGAPB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RALGAPB
product: Ral GTPase activating protein non-catalytic beta subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016303260.1
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: join(716424..716546,724589..724801,725466..725668,729702..729865,730500..730686,735662..735793,736934..737112,739407..739555,739666..739882,744565..744600,746388..746589,748068..748235,748992..749106,749343..749490,752326..752390,752553..752685,754686..754807,756817..756999,759607..759758,761434..761621,763758..763864,765783..765935,766557..766766,767705..767863,769782..769947,772657..772779,773494..773630,774421..774529,776880..776958,777289..777437,779046..782928)
location: region:716424-782928:1
so has part: feature:716424-716546:1:exon
so has part: feature:724589-724801:1:exon
so has part: feature:725466-725668:1:exon
so has part: feature:729702-729865:1:exon
so has part: feature:730500-730686:1:exon
so has part: feature:735662-735793:1:exon
so has part: feature:736934-737112:1:exon
so has part: feature:739407-739555:1:exon
so has part: feature:739666-739882:1:exon
so has part: feature:744565-744600:1:exon
so has part: feature:746388-746589:1:exon
so has part: feature:748068-748235:1:exon
so has part: feature:748992-749106:1:exon
so has part: feature:749343-749490:1:exon
so has part: feature:752326-752390:1:exon
so has part: feature:752553-752685:1:exon
so has part: feature:754686-754807:1:exon
so has part: feature:756817-756999:1:exon
so has part: feature:759607-759758:1:exon
so has part: feature:761434-761621:1:exon
so has part: feature:763758-763864:1:exon
so has part: feature:765783-765935:1:exon
so has part: feature:766557-766766:1:exon
so has part: feature:767705-767863:1:exon
so has part: feature:769782-769947:1:exon
so has part: feature:772657-772779:1:exon
so has part: feature:773494-773630:1:exon
so has part: feature:774421-774529:1:exon
so has part: feature:776880-776958:1:exon
so has part: feature:777289-777437:1:exon
so has part: feature:779046-782928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716424-716546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724589-724801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725466-725668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729702-729865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730500-730686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735662-735793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736934-737112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739407-739555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739666-739882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:744565-744600:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:746388-746589:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748068-748235:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:748992-749106:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:749343-749490:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752326-752390:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:752553-752685:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:754686-754807:1:exon

position:754686:1
position: 754686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:756817-756999:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:759607-759758:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761434-761621:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:763758-763864:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:765783-765935:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:766557-766766:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:767705-767863:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:769782-769947:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:772657-772779:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:773494-773630:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:774421-774529:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:776880-776958:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:777289-777437:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:779046-782928:1:exon

RALGAPB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RALGAPB
product: Ral GTPase activating protein non-catalytic beta subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005056950.1
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: join(716424..716546,724589..724801,725466..725668,729702..729865,730500..730686,735662..735793,736934..737112,739407..739555,739666..739882,746388..746589,748068..748235,748992..749106,749343..749490,752326..752390,752553..752685,754674..754807,756817..756999,759607..759758,761434..761621,763758..763864,765783..765935,766557..766766,767705..767863,769782..769947,772657..772779,773494..773630,774421..774529,776880..776958,777289..777437,779046..782928)
location: region:716424-782928:1
so has part: feature:716424-716546:1:exon
so has part: feature:724589-724801:1:exon
so has part: feature:725466-725668:1:exon
so has part: feature:729702-729865:1:exon
so has part: feature:730500-730686:1:exon
so has part: feature:735662-735793:1:exon
so has part: feature:736934-737112:1:exon
so has part: feature:739407-739555:1:exon
so has part: feature:739666-739882:1:exon
so has part: feature:746388-746589:1:exon
so has part: feature:748068-748235:1:exon
so has part: feature:748992-749106:1:exon
so has part: feature:749343-749490:1:exon
so has part: feature:752326-752390:1:exon
so has part: feature:752553-752685:1:exon
so has part: feature:754674-754807:1:exon
so has part: feature:756817-756999:1:exon
so has part: feature:759607-759758:1:exon
so has part: feature:761434-761621:1:exon
so has part: feature:763758-763864:1:exon
so has part: feature:765783-765935:1:exon
so has part: feature:766557-766766:1:exon
so has part: feature:767705-767863:1:exon
so has part: feature:769782-769947:1:exon
so has part: feature:772657-772779:1:exon
so has part: feature:773494-773630:1:exon
so has part: feature:774421-774529:1:exon
so has part: feature:776880-776958:1:exon
so has part: feature:777289-777437:1:exon
so has part: feature:779046-782928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716424-716546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724589-724801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725466-725668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729702-729865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730500-730686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735662-735793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736934-737112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739407-739555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739666-739882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746388-746589:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:748068-748235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748992-749106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:749343-749490:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:752326-752390:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752553-752685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:754674-754807:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:756817-756999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759607-759758:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761434-761621:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763758-763864:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:765783-765935:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:766557-766766:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:767705-767863:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:769782-769947:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:772657-772779:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:773494-773630:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:774421-774529:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:776880-776958:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:777289-777437:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:779046-782928:1:exon

RALGAPB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RALGAPB
product: Ral GTPase activating protein non-catalytic beta subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005056951.1
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: join(716424..716546,724589..724801,725466..725668,729702..729865,730500..730686,735662..735793,736934..737112,739407..739555,739666..739882,746388..746589,748068..748235,748992..749106,749343..749490,752326..752390,752553..752685,754686..754807,756817..756999,759607..759758,761434..761621,763758..763864,765783..765935,766557..766766,767705..767863,769782..769947,772657..772779,773494..773630,774421..774529,776880..776958,777289..777437,779046..782928)
location: region:716424-782928:1
so has part: feature:716424-716546:1:exon
so has part: feature:724589-724801:1:exon
so has part: feature:725466-725668:1:exon
so has part: feature:729702-729865:1:exon
so has part: feature:730500-730686:1:exon
so has part: feature:735662-735793:1:exon
so has part: feature:736934-737112:1:exon
so has part: feature:739407-739555:1:exon
so has part: feature:739666-739882:1:exon
so has part: feature:746388-746589:1:exon
so has part: feature:748068-748235:1:exon
so has part: feature:748992-749106:1:exon
so has part: feature:749343-749490:1:exon
so has part: feature:752326-752390:1:exon
so has part: feature:752553-752685:1:exon
so has part: feature:754686-754807:1:exon
so has part: feature:756817-756999:1:exon
so has part: feature:759607-759758:1:exon
so has part: feature:761434-761621:1:exon
so has part: feature:763758-763864:1:exon
so has part: feature:765783-765935:1:exon
so has part: feature:766557-766766:1:exon
so has part: feature:767705-767863:1:exon
so has part: feature:769782-769947:1:exon
so has part: feature:772657-772779:1:exon
so has part: feature:773494-773630:1:exon
so has part: feature:774421-774529:1:exon
so has part: feature:776880-776958:1:exon
so has part: feature:777289-777437:1:exon
so has part: feature:779046-782928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716424-716546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:724589-724801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:725466-725668:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729702-729865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730500-730686:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735662-735793:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:736934-737112:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739407-739555:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:739666-739882:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746388-746589:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:748068-748235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748992-749106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:749343-749490:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:752326-752390:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752553-752685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:754686-754807:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:756817-756999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759607-759758:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761434-761621:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763758-763864:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:765783-765935:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:766557-766766:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:767705-767863:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:769782-769947:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:772657-772779:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:773494-773630:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:774421-774529:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:776880-776958:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:777289-777437:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:779046-782928:1:exon

RALGAPB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RALGAPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral GTPase-activating protein subunit beta isoform X1
translation: MYSEWRSLHLVIQNDQGNTSVLHSYPENVGREVANAVVRPLGQALITSSVGSESLLKTDKEVKWTMEVVCYGLTLPLDGDTVKYCVDVYTDWIMALVLPKDSIPLPVIKEPNLYVQSILKHLQNLFVPRPDPGSSQIRLCLQVLKAVQKLAHESTIMARETWEVLLLFLLQINDTLLAAPTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTYGPSFPPFKIPDEDAGLIPLEMDNECVAQTWFRFLHMLSNPVDLSNPAIISSTPKFQEQFLNVSGMTQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSAPPTPVNRLSMPQSTATNTTPPHNRRHRAVTVNKVTMKTSTGTTAHPSKVQHQPSSTSPLSSPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTASFIQILLSYKSSIATQASVEFRRKGSQMSTDTMASNPMFDASECPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQIADFVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKVYVNPTELRRASINILLSLLPLPHHFGTIKSEVVLEGKFSNDDSSAYDKPVTFLSLKLRLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQMETNGGENNLFKSHSRTNSSISTASGGSTEPTTPDSERPAQALLRDYALHTDTAAGLLIRSIHLVTQRLNSQWRQDMSISLAALELLSGLAKVKVAVDPAERRRAISSVCSYIVFQCSRPAPLHSRDLHSVIVAAFQCLCVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKNSEQEVKYKGDKEPNPASMRVKDAAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTVNKHSFRYFVLDNSVILAMLEQPLGNEENDSFPSVTVLIRGTSGRFAWAQQLCLLPRGAKANQKTFVPEPRPAPKNDVGLKHSVKHRPFPEEVDKIPFVKADLSIPDLHEIVNQELEERHEKLRNGMAQQIVFETSIDQRSEEEWRKKSFPDPVTECKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDSALPGFFDDLGYLDLLPCRPFDTVFIFYMKAGQKTSQEILKNMESSRIVQPHFLEFLLSLGWSVDVGKHPGWTGHVSTSWSINSCSDEEGPEQDDLVISEDVGASIFNGQKKVLYYADALTEIAFVVPSPVESLTDSLESSVSDQESDSNMDLLPGILKQQPLTLELFPNHTDNLNPSQRLSPTSRSKRMPQGRTIPPMGPETKVYVVWVERYDDIENFPLPDLVSETSTGVETTANSSSSLRSTIPEKEVPVIFIHPLNTGLFRIKLQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESDSYNPPHVRRKQKIADIVNKYRNRQLEPEFYTSLFQEVGLKNCNP
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: join(724619..724801,725466..725668,729702..729865,730500..730686,735662..735793,736934..737112,739407..739555,739666..739882,744565..744600,746388..746589,748068..748235,748992..749106,749343..749490,752326..752390,752553..752685,754674..754807,756817..756999,759607..759758,761434..761621,763758..763864,765783..765935,766557..766766,767705..767863,769782..769947,772657..772779,773494..773630,774421..774529,776880..776958,777289..777437,779046..779239)
location: region:724619-779239:1
so has part: feature:724619-724801:1:exon
so has part: feature:725466-725668:1:exon
so has part: feature:729702-729865:1:exon
so has part: feature:730500-730686:1:exon
so has part: feature:735662-735793:1:exon
so has part: feature:736934-737112:1:exon
so has part: feature:739407-739555:1:exon
so has part: feature:739666-739882:1:exon
so has part: feature:744565-744600:1:exon
so has part: feature:746388-746589:1:exon
so has part: feature:748068-748235:1:exon
so has part: feature:748992-749106:1:exon
so has part: feature:749343-749490:1:exon
so has part: feature:752326-752390:1:exon
so has part: feature:752553-752685:1:exon
so has part: feature:754674-754807:1:exon
so has part: feature:756817-756999:1:exon
so has part: feature:759607-759758:1:exon
so has part: feature:761434-761621:1:exon
so has part: feature:763758-763864:1:exon
so has part: feature:765783-765935:1:exon
so has part: feature:766557-766766:1:exon
so has part: feature:767705-767863:1:exon
so has part: feature:769782-769947:1:exon
so has part: feature:772657-772779:1:exon
so has part: feature:773494-773630:1:exon
so has part: feature:774421-774529:1:exon
so has part: feature:776880-776958:1:exon
so has part: feature:777289-777437:1:exon
so has part: feature:779046-779239:1:exon

XP_016158745.1
type: Protein
SIO_000068: ncbiprotein

position:724619:1
position: 724619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779239:1
position: 779239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724619-724801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725466-725668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729702-729865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730500-730686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735662-735793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736934-737112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739407-739555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739666-739882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:744565-744600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746388-746589:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:748068-748235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748992-749106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:749343-749490:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:752326-752390:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752553-752685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:754674-754807:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:756817-756999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759607-759758:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761434-761621:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763758-763864:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:765783-765935:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:766557-766766:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:767705-767863:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:769782-769947:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:772657-772779:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:773494-773630:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:774421-774529:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:776880-776958:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:777289-777437:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:779046-779239:1:exon

RALGAPB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RALGAPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral GTPase-activating protein subunit beta isoform X2
translation: MYSEWRSLHLVIQNDQGNTSVLHSYPENVGREVANAVVRPLGQALITSSVGSESLLKTDKEVKWTMEVVCYGLTLPLDGDTVKYCVDVYTDWIMALVLPKDSIPLPVIKEPNLYVQSILKHLQNLFVPRPDPGSSQIRLCLQVLKAVQKLAHESTIMARETWEVLLLFLLQINDTLLAAPTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTYGPSFPPFKIPDEDAGLIPLEMDNECVAQTWFRFLHMLSNPVDLSNPAIISSTPKFQEQFLNVSGMTQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSAPPTPVNRLSMPQSTATNTTPPHNRRHRAVTVNKVTMKTSTGTTAHPSKVQHQPSSTSPLSSPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTASFIQILLSYKSSIATQASVEFRRKGSQMSTDTMASNPMFDASECPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQIADFVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKVYVNPTELRRASINILLSLLPLPHHFGTIKSEVVLEGKFSNDDSSAYDKPVTFLSLKLRLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQMETNGGENNLFKSHSRTNSSISTASGGSTEPTTPDSERPAQALLRDYDTAAGLLIRSIHLVTQRLNSQWRQDMSISLAALELLSGLAKVKVAVDPAERRRAISSVCSYIVFQCSRPAPLHSRDLHSVIVAAFQCLCVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKNSEQEVKYKGDKEPNPASMRVKDAAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTVNKHSFRYFVLDNSVILAMLEQPLGNEENDSFPSVTVLIRGTSGRFAWAQQLCLLPRGAKANQKTFVPEPRPAPKNDVGLKHSVKHRPFPEEVDKIPFVKADLSIPDLHEIVNQELEERHEKLRNGMAQQIVFETSIDQRSEEEWRKKSFPDPVTECKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDSALPGFFDDLGYLDLLPCRPFDTVFIFYMKAGQKTSQEILKNMESSRIVQPHFLEFLLSLGWSVDVGKHPGWTGHVSTSWSINSCSDEEGPEQDDLVISEDVGASIFNGQKKVLYYADALTEIAFVVPSPVESLTDSLESSVSDQESDSNMDLLPGILKQQPLTLELFPNHTDNLNPSQRLSPTSRSKRMPQGRTIPPMGPETKVYVVWVERYDDIENFPLPDLVSETSTGVETTANSSSSLRSTIPEKEVPVIFIHPLNTGLFRIKLQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESDSYNPPHVRRKQKIADIVNKYRNRQLEPEFYTSLFQEVGLKNCNP
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: join(724619..724801,725466..725668,729702..729865,730500..730686,735662..735793,736934..737112,739407..739555,739666..739882,744565..744600,746388..746589,748068..748235,748992..749106,749343..749490,752326..752390,752553..752685,754686..754807,756817..756999,759607..759758,761434..761621,763758..763864,765783..765935,766557..766766,767705..767863,769782..769947,772657..772779,773494..773630,774421..774529,776880..776958,777289..777437,779046..779239)
location: region:724619-779239:1
so has part: feature:724619-724801:1:exon
so has part: feature:725466-725668:1:exon
so has part: feature:729702-729865:1:exon
so has part: feature:730500-730686:1:exon
so has part: feature:735662-735793:1:exon
so has part: feature:736934-737112:1:exon
so has part: feature:739407-739555:1:exon
so has part: feature:739666-739882:1:exon
so has part: feature:744565-744600:1:exon
so has part: feature:746388-746589:1:exon
so has part: feature:748068-748235:1:exon
so has part: feature:748992-749106:1:exon
so has part: feature:749343-749490:1:exon
so has part: feature:752326-752390:1:exon
so has part: feature:752553-752685:1:exon
so has part: feature:754686-754807:1:exon
so has part: feature:756817-756999:1:exon
so has part: feature:759607-759758:1:exon
so has part: feature:761434-761621:1:exon
so has part: feature:763758-763864:1:exon
so has part: feature:765783-765935:1:exon
so has part: feature:766557-766766:1:exon
so has part: feature:767705-767863:1:exon
so has part: feature:769782-769947:1:exon
so has part: feature:772657-772779:1:exon
so has part: feature:773494-773630:1:exon
so has part: feature:774421-774529:1:exon
so has part: feature:776880-776958:1:exon
so has part: feature:777289-777437:1:exon
so has part: feature:779046-779239:1:exon

XP_016158746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:724619-724801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725466-725668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729702-729865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730500-730686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735662-735793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736934-737112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739407-739555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739666-739882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:744565-744600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746388-746589:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:748068-748235:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748992-749106:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:749343-749490:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:752326-752390:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:752553-752685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:754686-754807:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:756817-756999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759607-759758:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:761434-761621:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:763758-763864:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:765783-765935:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:766557-766766:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:767705-767863:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:769782-769947:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:772657-772779:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:773494-773630:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:774421-774529:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:776880-776958:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:777289-777437:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:779046-779239:1:exon

RALGAPB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RALGAPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral GTPase-activating protein subunit beta isoform X3
translation: MYSEWRSLHLVIQNDQGNTSVLHSYPENVGREVANAVVRPLGQALITSSVGSESLLKTDKEVKWTMEVVCYGLTLPLDGDTVKYCVDVYTDWIMALVLPKDSIPLPVIKEPNLYVQSILKHLQNLFVPRPDPGSSQIRLCLQVLKAVQKLAHESTIMARETWEVLLLFLLQINDTLLAAPTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTYGPSFPPFKIPDEDAGLIPLEMDNECVAQTWFRFLHMLSNPVDLSNPAIISSTPKFQEQFLNVSGMTQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSAPPTPVNRLSMPQSTATNTTPPHNRRHRAVTVNKVTMKTSTGTTAHPSKVQHQPSSTSPLSSPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTAIATQASVEFRRKGSQMSTDTMASNPMFDASECPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQIADFVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKVYVNPTELRRASINILLSLLPLPHHFGTIKSEVVLEGKFSNDDSSAYDKPVTFLSLKLRLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQMETNGGENNLFKSHSRTNSSISTASGGSTEPTTPDSERPAQALLRDYALHTDTAAGLLIRSIHLVTQRLNSQWRQDMSISLAALELLSGLAKVKVAVDPAERRRAISSVCSYIVFQCSRPAPLHSRDLHSVIVAAFQCLCVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKNSEQEVKYKGDKEPNPASMRVKDAAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTVNKHSFRYFVLDNSVILAMLEQPLGNEENDSFPSVTVLIRGTSGRFAWAQQLCLLPRGAKANQKTFVPEPRPAPKNDVGLKHSVKHRPFPEEVDKIPFVKADLSIPDLHEIVNQELEERHEKLRNGMAQQIVFETSIDQRSEEEWRKKSFPDPVTECKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDSALPGFFDDLGYLDLLPCRPFDTVFIFYMKAGQKTSQEILKNMESSRIVQPHFLEFLLSLGWSVDVGKHPGWTGHVSTSWSINSCSDEEGPEQDDLVISEDVGASIFNGQKKVLYYADALTEIAFVVPSPVESLTDSLESSVSDQESDSNMDLLPGILKQQPLTLELFPNHTDNLNPSQRLSPTSRSKRMPQGRTIPPMGPETKVYVVWVERYDDIENFPLPDLVSETSTGVETTANSSSSLRSTIPEKEVPVIFIHPLNTGLFRIKLQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESDSYNPPHVRRKQKIADIVNKYRNRQLEPEFYTSLFQEVGLKNCNP
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: join(724619..724801,725466..725668,729702..729865,730500..730686,735662..735793,736934..737112,739407..739555,739666..739882,746388..746589,748068..748235,748992..749106,749343..749490,752326..752390,752553..752685,754674..754807,756817..756999,759607..759758,761434..761621,763758..763864,765783..765935,766557..766766,767705..767863,769782..769947,772657..772779,773494..773630,774421..774529,776880..776958,777289..777437,779046..779239)
location: region:724619-779239:1
so has part: feature:724619-724801:1:exon
so has part: feature:725466-725668:1:exon
so has part: feature:729702-729865:1:exon
so has part: feature:730500-730686:1:exon
so has part: feature:735662-735793:1:exon
so has part: feature:736934-737112:1:exon
so has part: feature:739407-739555:1:exon
so has part: feature:739666-739882:1:exon
so has part: feature:746388-746589:1:exon
so has part: feature:748068-748235:1:exon
so has part: feature:748992-749106:1:exon
so has part: feature:749343-749490:1:exon
so has part: feature:752326-752390:1:exon
so has part: feature:752553-752685:1:exon
so has part: feature:754674-754807:1:exon
so has part: feature:756817-756999:1:exon
so has part: feature:759607-759758:1:exon
so has part: feature:761434-761621:1:exon
so has part: feature:763758-763864:1:exon
so has part: feature:765783-765935:1:exon
so has part: feature:766557-766766:1:exon
so has part: feature:767705-767863:1:exon
so has part: feature:769782-769947:1:exon
so has part: feature:772657-772779:1:exon
so has part: feature:773494-773630:1:exon
so has part: feature:774421-774529:1:exon
so has part: feature:776880-776958:1:exon
so has part: feature:777289-777437:1:exon
so has part: feature:779046-779239:1:exon

XP_005057007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:724619-724801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725466-725668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729702-729865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730500-730686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735662-735793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736934-737112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739407-739555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739666-739882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746388-746589:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:748068-748235:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:748992-749106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:749343-749490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:752326-752390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:752553-752685:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:754674-754807:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:756817-756999:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759607-759758:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:761434-761621:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:763758-763864:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:765783-765935:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:766557-766766:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:767705-767863:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:769782-769947:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772657-772779:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:773494-773630:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:774421-774529:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:776880-776958:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:777289-777437:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:779046-779239:1:exon

RALGAPB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RALGAPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral GTPase-activating protein subunit beta isoform X4
translation: MYSEWRSLHLVIQNDQGNTSVLHSYPENVGREVANAVVRPLGQALITSSVGSESLLKTDKEVKWTMEVVCYGLTLPLDGDTVKYCVDVYTDWIMALVLPKDSIPLPVIKEPNLYVQSILKHLQNLFVPRPDPGSSQIRLCLQVLKAVQKLAHESTIMARETWEVLLLFLLQINDTLLAAPTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTYGPSFPPFKIPDEDAGLIPLEMDNECVAQTWFRFLHMLSNPVDLSNPAIISSTPKFQEQFLNVSGMTQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSAPPTPVNRLSMPQSTATNTTPPHNRRHRAVTVNKVTMKTSTGTTAHPSKVQHQPSSTSPLSSPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTAIATQASVEFRRKGSQMSTDTMASNPMFDASECPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQIADFVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKVYVNPTELRRASINILLSLLPLPHHFGTIKSEVVLEGKFSNDDSSAYDKPVTFLSLKLRLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQMETNGGENNLFKSHSRTNSSISTASGGSTEPTTPDSERPAQALLRDYDTAAGLLIRSIHLVTQRLNSQWRQDMSISLAALELLSGLAKVKVAVDPAERRRAISSVCSYIVFQCSRPAPLHSRDLHSVIVAAFQCLCVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKNSEQEVKYKGDKEPNPASMRVKDAAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTVNKHSFRYFVLDNSVILAMLEQPLGNEENDSFPSVTVLIRGTSGRFAWAQQLCLLPRGAKANQKTFVPEPRPAPKNDVGLKHSVKHRPFPEEVDKIPFVKADLSIPDLHEIVNQELEERHEKLRNGMAQQIVFETSIDQRSEEEWRKKSFPDPVTECKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDSALPGFFDDLGYLDLLPCRPFDTVFIFYMKAGQKTSQEILKNMESSRIVQPHFLEFLLSLGWSVDVGKHPGWTGHVSTSWSINSCSDEEGPEQDDLVISEDVGASIFNGQKKVLYYADALTEIAFVVPSPVESLTDSLESSVSDQESDSNMDLLPGILKQQPLTLELFPNHTDNLNPSQRLSPTSRSKRMPQGRTIPPMGPETKVYVVWVERYDDIENFPLPDLVSETSTGVETTANSSSSLRSTIPEKEVPVIFIHPLNTGLFRIKLQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESDSYNPPHVRRKQKIADIVNKYRNRQLEPEFYTSLFQEVGLKNCNP
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: join(724619..724801,725466..725668,729702..729865,730500..730686,735662..735793,736934..737112,739407..739555,739666..739882,746388..746589,748068..748235,748992..749106,749343..749490,752326..752390,752553..752685,754686..754807,756817..756999,759607..759758,761434..761621,763758..763864,765783..765935,766557..766766,767705..767863,769782..769947,772657..772779,773494..773630,774421..774529,776880..776958,777289..777437,779046..779239)
location: region:724619-779239:1
so has part: feature:724619-724801:1:exon
so has part: feature:725466-725668:1:exon
so has part: feature:729702-729865:1:exon
so has part: feature:730500-730686:1:exon
so has part: feature:735662-735793:1:exon
so has part: feature:736934-737112:1:exon
so has part: feature:739407-739555:1:exon
so has part: feature:739666-739882:1:exon
so has part: feature:746388-746589:1:exon
so has part: feature:748068-748235:1:exon
so has part: feature:748992-749106:1:exon
so has part: feature:749343-749490:1:exon
so has part: feature:752326-752390:1:exon
so has part: feature:752553-752685:1:exon
so has part: feature:754686-754807:1:exon
so has part: feature:756817-756999:1:exon
so has part: feature:759607-759758:1:exon
so has part: feature:761434-761621:1:exon
so has part: feature:763758-763864:1:exon
so has part: feature:765783-765935:1:exon
so has part: feature:766557-766766:1:exon
so has part: feature:767705-767863:1:exon
so has part: feature:769782-769947:1:exon
so has part: feature:772657-772779:1:exon
so has part: feature:773494-773630:1:exon
so has part: feature:774421-774529:1:exon
so has part: feature:776880-776958:1:exon
so has part: feature:777289-777437:1:exon
so has part: feature:779046-779239:1:exon

XP_005057008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:724619-724801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725466-725668:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729702-729865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730500-730686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735662-735793:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736934-737112:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739407-739555:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739666-739882:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746388-746589:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:748068-748235:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:748992-749106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:749343-749490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:752326-752390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:752553-752685:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:754686-754807:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:756817-756999:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759607-759758:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:761434-761621:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:763758-763864:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:765783-765935:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:766557-766766:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:767705-767863:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:769782-769947:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:772657-772779:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:773494-773630:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:774421-774529:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:776880-776958:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:777289-777437:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:779046-779239:1:exon

CHD6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833316..888456
location: region:833316-888456:1
so has part: feature:833316-888456:1:exon
subclass of: SO_0000010

101816785
type: Gene
SIO_000068: ncbigene

position:833316:1
position: 833316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888456:1
position: 888456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833316-888456:1:exon

CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016303190.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,882966..883070,885029..888456)
location: region:833316-888456:1
so has part: feature:833316-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854035:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864202:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879807-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:882966-883070:1:exon
so has part: feature:885029-888456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833316-833399:1:exon

position:833399:1
position: 833399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

position:843482:1
position: 843482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843975:1
position: 843975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

position:847183:1
position: 847183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847321:1
position: 847321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

position:847850:1
position: 847850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847999:1
position: 847999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

position:851457:1
position: 851457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851522:1
position: 851522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

position:851966:1
position: 851966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852024:1
position: 852024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

position:852377:1
position: 852377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852494:1
position: 852494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

position:853610:1
position: 853610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:853696:1
position: 853696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854035:1:exon

position:853886:1
position: 853886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854035:1
position: 854035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

position:854306:1
position: 854306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854427:1
position: 854427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

position:855045:1
position: 855045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855288:1
position: 855288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

position:855712:1
position: 855712
reference: sequence
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urn:…
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urn:…
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urn:…
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position:860139:1
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urn:…
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SIO_000628: feature:860662-860826:1:exon

position:860662:1
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position:860826:1
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urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

position:861223:1
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position:861402:1
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urn:…
SIO_000300: 19
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position:862221:1
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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position:864202:1
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

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urn:…
SIO_000300: 24
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position:869424:1
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urn:…
SIO_000300: 25
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position:870077:1
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position:870206:1
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urn:…
SIO_000300: 26
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position:870501:1
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urn:…
SIO_000300: 27
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urn:…
SIO_000300: 28
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urn:…
SIO_000300: 29
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
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position:877657:1
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urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

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position:878147:1
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urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

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position:879168:1
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urn:…
SIO_000300: 34
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urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:882966-883070:1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:885029-888456:1:exon

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reference: sequence
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CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005056954.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,885029..888456)
location: region:833316-888456:1
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so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
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so has part: feature:864000-864202:1:exon
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so has part: feature:871865-872084:1:exon
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so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
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so has part: feature:878722-879168:1:exon
so has part: feature:879807-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:885029-888456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833316-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

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SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

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SIO_000628: feature:851966-852024:1:exon

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SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864202:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
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SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

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SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

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SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879807-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:885029-888456:1:exon

CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005056956.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,885029..888456)
location: region:833316-888456:1
so has part: feature:833316-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
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so has part: feature:878722-879168:1:exon
so has part: feature:879807-879998:1:exon
so has part: feature:885029-888456:1:exon

urn:…
SIO_000300: 1
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urn:…
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SIO_000628: feature:860662-860826:1:exon

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SIO_000628: feature:861223-861402:1:exon

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urn:…
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urn:…
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SIO_000628: feature:867582-867741:1:exon

urn:…
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urn:…
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SIO_000628: feature:879807-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:885029-888456:1:exon

CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016303192.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879810..879998,881794..881913,882966..883070,885029..888456)
location: region:833316-888456:1
so has part: feature:833316-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
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CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005056955.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
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location: region:833316-888456:1
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CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016303191.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,882966..883070,885029..888456)
location: region:833316-888456:1
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position:864199:1
position: 864199
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CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016303193.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879810..879998,881794..881913,882966..883070,885029..888456)
location: region:833316-888456:1
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CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016303194.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854020,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,882966..883070,885029..888456)
location: region:833316-888456:1
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position:854020:1
position: 854020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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urn:…
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SIO_000628: feature:885029-888456:1:exon

CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005056953.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854020,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,882966..883070,885029..888456)
location: region:833316-888456:1
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CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016303195.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854020,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879810..879998,881794..881913,882966..883070,885029..888456)
location: region:833316-888456:1
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SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879810-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:882966-883070:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:885029-888456:1:exon

CHD6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHD6
product: chromodomain helicase DNA binding protein 6, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016303196.1
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833316..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854020,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879810..879998,881794..881913,885029..888456)
location: region:833316-888456:1
so has part: feature:833316-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854020:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864199:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879810-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:885029-888456:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833316-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864199:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879810-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:885029-888456:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X1
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGC…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,882966..883070,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854035:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864202:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879807-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:882966-883070:1:exon
so has part: feature:885029-885916:1:exon

XP_016158676.1
type: Protein
SIO_000068: ncbiprotein

position:833367:1
position: 833367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885916:1
position: 885916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864202:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879807-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:882966-883070:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X8
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGC…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854035:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864202:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879807-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:885029-885916:1:exon

XP_005057011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864202:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879807-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X10
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGC…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854035:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864202:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879807-879998:1:exon
so has part: feature:885029-885916:1:exon

XP_005057013.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864202:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879807-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X3
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGC…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879810..879998,881794..881913,882966..883070,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854035:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864202:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879810-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:882966-883070:1:exon
so has part: feature:885029-885916:1:exon

XP_016158678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864202:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879810-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:882966-883070:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X9
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGC…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879810..879998,881794..881913,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854035:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864202:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879810-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:885029-885916:1:exon

XP_005057012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864202:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879810-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X2
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGCT…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,882966..883070,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854035:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864199:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879807-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:882966-883070:1:exon
so has part: feature:885029-885916:1:exon

XP_016158677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864199:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879807-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:882966-883070:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X4
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTVTYPEERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGCT…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854035,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879810..879998,881794..881913,882966..883070,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854035:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864199:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879810-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:882966-883070:1:exon
so has part: feature:885029-885916:1:exon

XP_016158679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854035:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864199:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879810-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:882966-883070:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X5
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGSLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGCTEAPH…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854020,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864202,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,882966..883070,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854020:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864202:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879807-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:882966-883070:1:exon
so has part: feature:885029-885916:1:exon

XP_016158680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864202:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879807-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:882966-883070:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X6
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGCTEAPHP…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854020,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879807..879998,881794..881913,882966..883070,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854020:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864199:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879807-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:882966-883070:1:exon
so has part: feature:885029-885916:1:exon

XP_005057010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864199:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879807-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:882966-883070:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X7
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGCTEAPHP…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854020,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879810..879998,881794..881913,882966..883070,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854020:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864199:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879810-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:882966-883070:1:exon
so has part: feature:885029-885916:1:exon

XP_016158681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864199:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879810-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:882966-883070:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:885029-885916:1:exon

CHD6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHD6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromodomain-helicase-DNA-binding protein 6 isoform X11
translation: MIMKIQKKEKQPPSLKALSLSPMSSAWECKGQDTFASSEEQDEVPHQVTVTATSTGGQCQCPKEESDGAPPKRTSTQNGMQDSGGMGVKKKRKKKDLGEQEGGDKAAVEVKPKRRREPKEPKEPKKVKESKKPKEPKQREVAKKPRKPREPKAPKEPKDKKSGSEPAPRSRPKKSSKDTPVEKKKKGKRKNEIPVNSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKEAHPGGLAFETEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHTERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHCPEAADFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGVSDGAQDAAERGSVEKEESSGEKLEGLSKQEDIVAAGVGEASEKRDEPATAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARGEVLVPGSHGYWLQDEVFRRASEMDSLNREMQKRWTRREQADFYRTVSSFGVIYDQEKKIFDWAQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGAPDPDIYVEPITEERAARTLYRIELLRKVREQVLKCPQLQERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRAGFPGPETLCCLYQSNSKLYSSPVYSRMDQSCETLENEGESHVKLEAVDSAMCQAGGSPLDANCDTFMSEVRDIISSNYDESSLPESLVCMMYDEKACPSEQSSLARDSPGRTDGGSGIAKLSEGKLEGDEDPSSCDADAMREASFLEGLQVGSDRMDNQNEEAEPSPPTPKGNPSQSALVKLGKGLEQKEALASPAAGLPEHGTMERVLGVGLYSPSLHNYELKVPPEQRFISLLQEKGLEAKLGPSQSHSEEDEEEEEDDDNSEAAADAMEGLNGSRTRADCDTEAHELGGEEQSSGLPTPEDTCPEDVNGERESLGLGEPRAEGREDCGLNEESTQQLPPGQAQSQPFGLPTPLPQGEPRGEEPPCVRGEPLGRDAEGQTGCTEAPHP…
SIO_010081: CHD6
subclass of: SO_0000673
so part of: CHD6
location: join(833367..833399,843482..843975,847183..847321,847850..847999,851457..851522,851966..852024,852377..852494,853610..853696,853886..854020,854306..854427,855045..855288,855712..855888,857556..857699,858438..858693,859193..859403,859944..860139,860662..860826,861223..861402,862111..862221,863392..863594,864000..864199,867582..867741,868306..868395,869321..869424,870077..870206,870441..870501,871164..871221,871865..872084,874092..874300,875358..876911,877509..877657,877941..878147,878722..879168,879810..879998,881794..881913,885029..885916)
location: region:833367-885916:1
so has part: feature:833367-833399:1:exon
so has part: feature:843482-843975:1:exon
so has part: feature:847183-847321:1:exon
so has part: feature:847850-847999:1:exon
so has part: feature:851457-851522:1:exon
so has part: feature:851966-852024:1:exon
so has part: feature:852377-852494:1:exon
so has part: feature:853610-853696:1:exon
so has part: feature:853886-854020:1:exon
so has part: feature:854306-854427:1:exon
so has part: feature:855045-855288:1:exon
so has part: feature:855712-855888:1:exon
so has part: feature:857556-857699:1:exon
so has part: feature:858438-858693:1:exon
so has part: feature:859193-859403:1:exon
so has part: feature:859944-860139:1:exon
so has part: feature:860662-860826:1:exon
so has part: feature:861223-861402:1:exon
so has part: feature:862111-862221:1:exon
so has part: feature:863392-863594:1:exon
so has part: feature:864000-864199:1:exon
so has part: feature:867582-867741:1:exon
so has part: feature:868306-868395:1:exon
so has part: feature:869321-869424:1:exon
so has part: feature:870077-870206:1:exon
so has part: feature:870441-870501:1:exon
so has part: feature:871164-871221:1:exon
so has part: feature:871865-872084:1:exon
so has part: feature:874092-874300:1:exon
so has part: feature:875358-876911:1:exon
so has part: feature:877509-877657:1:exon
so has part: feature:877941-878147:1:exon
so has part: feature:878722-879168:1:exon
so has part: feature:879810-879998:1:exon
so has part: feature:881794-881913:1:exon
so has part: feature:885029-885916:1:exon

XP_016158682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:833367-833399:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:843482-843975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:847183-847321:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:847850-847999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851457-851522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851966-852024:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852377-852494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:853610-853696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853886-854020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854306-854427:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:855045-855288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:855712-855888:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:857556-857699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:858438-858693:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:859193-859403:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:859944-860139:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:860662-860826:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:861223-861402:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:862111-862221:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:863392-863594:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:864000-864199:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:867582-867741:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:868306-868395:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:869321-869424:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:870077-870206:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:870441-870501:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:871164-871221:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:871865-872084:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:874092-874300:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:875358-876911:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:877509-877657:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:877941-878147:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:878722-879168:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:879810-879998:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:881794-881913:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:885029-885916:1:exon

RBL1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 893700..917792
location: region:893700-917792:1
so has part: feature:893700-917792:1:exon
subclass of: SO_0000010

101816601
type: Gene
SIO_000068: ncbigene

position:893700:1
position: 893700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917792:1
position: 917792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893700-917792:1:exon

RBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RBL1
product: retinoblastoma-like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005056952.2
SIO_010081: RBL1
subclass of: SO_0000673
so part of: RBL1
location: join(893700..893896,895106..895170,895262..895390,895493..895653,896306..896355,897970..898153,899553..899719,901251..901363,901889..901992,902773..902910,904405..904569,904734..904869,906833..907099,908410..908588,911447..911623,913013..913084,913269..913353,914291..914457,914832..914876,914922..915059,915673..917792)
location: region:893700-917792:1
so has part: feature:893700-893896:1:exon
so has part: feature:895106-895170:1:exon
so has part: feature:895262-895390:1:exon
so has part: feature:895493-895653:1:exon
so has part: feature:896306-896355:1:exon
so has part: feature:897970-898153:1:exon
so has part: feature:899553-899719:1:exon
so has part: feature:901251-901363:1:exon
so has part: feature:901889-901992:1:exon
so has part: feature:902773-902910:1:exon
so has part: feature:904405-904569:1:exon
so has part: feature:904734-904869:1:exon
so has part: feature:906833-907099:1:exon
so has part: feature:908410-908588:1:exon
so has part: feature:911447-911623:1:exon
so has part: feature:913013-913084:1:exon
so has part: feature:913269-913353:1:exon
so has part: feature:914291-914457:1:exon
so has part: feature:914832-914876:1:exon
so has part: feature:914922-915059:1:exon
so has part: feature:915673-917792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:893700-893896:1:exon

position:893896:1
position: 893896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:895106-895170:1:exon

position:895106:1
position: 895106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895170:1
position: 895170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:895262-895390:1:exon

position:895262:1
position: 895262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895390:1
position: 895390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:895493-895653:1:exon

position:895493:1
position: 895493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895653:1
position: 895653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:896306-896355:1:exon

position:896306:1
position: 896306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896355:1
position: 896355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:897970-898153:1:exon

position:897970:1
position: 897970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898153:1
position: 898153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:899553-899719:1:exon

position:899553:1
position: 899553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899719:1
position: 899719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:901251-901363:1:exon

position:901251:1
position: 901251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901363:1
position: 901363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:901889-901992:1:exon

position:901889:1
position: 901889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901992:1
position: 901992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:902773-902910:1:exon

position:902773:1
position: 902773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902910:1
position: 902910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:904405-904569:1:exon

position:904405:1
position: 904405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904569:1
position: 904569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:904734-904869:1:exon

position:904734:1
position: 904734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904869:1
position: 904869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:906833-907099:1:exon

position:906833:1
position: 906833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907099:1
position: 907099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:908410-908588:1:exon

position:908410:1
position: 908410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908588:1
position: 908588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:911447-911623:1:exon

position:911447:1
position: 911447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911623:1
position: 911623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:913013-913084:1:exon

position:913013:1
position: 913013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913084:1
position: 913084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:913269-913353:1:exon

position:913269:1
position: 913269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913353:1
position: 913353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:914291-914457:1:exon

position:914291:1
position: 914291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914457:1
position: 914457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:914832-914876:1:exon

position:914832:1
position: 914832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914876:1
position: 914876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:914922-915059:1:exon

position:914922:1
position: 914922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915059:1
position: 915059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:915673-917792:1:exon

position:915673:1
position: 915673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-like protein 1 isoform X1
translation: MKKWMDMSNLPQEFRERVERLERNFEVSTVIFKKFEPIFFDIFQNPYEETSKPHRSRKQRRVPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDLLNPSFKGLPVEFQALGIPGSEEPPCIIALLCELHDGLLVEAKGIKEHYFKPYIAKLFARKILKGDCLLDLCNFTENSKALNKEYEEYVLTVGDFDERVFLGADAEEEIGTRKFPADVAGEKTAARAHMECHLQQHFEKKRSFAPSTPLTGRRYLREKEAAITPVASATQSVSRLQSMVAGLKNAPSEQLTAIFESCARSPLESIVSRVKEIGETFCCSYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGKDLTALLEQDLFHRSLLACCLELVLFAYSSPRTFPWIIDVLDLRPFYFYKVIEVLIRSEEGLSRDMVKHLNSIEEQILESLAWTRNSALWNALEASENKVPTCEEVIFPSNFEASNGGSGFGHLPMMPLSPIVHPRVKEVRTDLGGSLRRDVQPLSPISVHERYSSPTAGSAKRRLFGDDSPKEMQIEKILTKGTKLTIAPASSIGAENMSASPGQTVLTMTTATGPGKAGQKVTIPLHGVANDMGGITLVPISMNLGQPCKVDVQAPCHPPGSQAQEVQLPAASKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSDDVALDKNANPDTEMTEDSSVKAGSSSGRSAAENSSESETEERGDLIKFYNAVYVGRVKSFALKYDITNQDHVVEAPPLSPFPSVRQQPLSPRRVSQQHSVYVSPHKSRNQNKGGACLPPPAALLYRFNGSPSKSLKDINNMIKQGEHRSKKRAITIDSDTESPTKRLCQENDDVLLKRLQDVVSERANR
SIO_010081: RBL1
subclass of: SO_0000673
so part of: RBL1
location: join(893718..893896,895106..895170,895262..895390,895493..895653,896306..896355,897970..898153,899553..899719,901251..901363,901889..901992,902773..902910,904405..904569,904734..904869,906833..907099,908410..908588,911447..911623,913013..913084,913269..913353,914291..914457,914832..914876,914922..915059,915673..915843)
location: region:893718-915843:1
so has part: feature:893718-893896:1:exon
so has part: feature:895106-895170:1:exon
so has part: feature:895262-895390:1:exon
so has part: feature:895493-895653:1:exon
so has part: feature:896306-896355:1:exon
so has part: feature:897970-898153:1:exon
so has part: feature:899553-899719:1:exon
so has part: feature:901251-901363:1:exon
so has part: feature:901889-901992:1:exon
so has part: feature:902773-902910:1:exon
so has part: feature:904405-904569:1:exon
so has part: feature:904734-904869:1:exon
so has part: feature:906833-907099:1:exon
so has part: feature:908410-908588:1:exon
so has part: feature:911447-911623:1:exon
so has part: feature:913013-913084:1:exon
so has part: feature:913269-913353:1:exon
so has part: feature:914291-914457:1:exon
so has part: feature:914832-914876:1:exon
so has part: feature:914922-915059:1:exon
so has part: feature:915673-915843:1:exon

XP_005057009.1
type: Protein
SIO_000068: ncbiprotein

position:893718:1
position: 893718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915843:1
position: 915843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893718-893896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895106-895170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895262-895390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:895493-895653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:896306-896355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897970-898153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:899553-899719:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901251-901363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:901889-901992:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:902773-902910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:904405-904569:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:904734-904869:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:906833-907099:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:908410-908588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:911447-911623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:913013-913084:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:913269-913353:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:914291-914457:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914832-914876:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:914922-915059:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:915673-915843:1:exon

RBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RBL1
product: retinoblastoma-like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303197.1
SIO_010081: RBL1
subclass of: SO_0000673
so part of: RBL1
location: join(893812..893896,895106..895170,895362..895390,895493..895653,896306..896355,897970..898153,899553..899719,901251..901363,901889..901992,902773..902910,904405..904569,904734..904869,906833..907099,908410..908588,911447..911623,913013..913084,913269..913353,914291..914457,914832..915059,915673..917791)
location: region:893812-917791:1
so has part: feature:893812-893896:1:exon
so has part: feature:895106-895170:1:exon
so has part: feature:895362-895390:1:exon
so has part: feature:895493-895653:1:exon
so has part: feature:896306-896355:1:exon
so has part: feature:897970-898153:1:exon
so has part: feature:899553-899719:1:exon
so has part: feature:901251-901363:1:exon
so has part: feature:901889-901992:1:exon
so has part: feature:902773-902910:1:exon
so has part: feature:904405-904569:1:exon
so has part: feature:904734-904869:1:exon
so has part: feature:906833-907099:1:exon
so has part: feature:908410-908588:1:exon
so has part: feature:911447-911623:1:exon
so has part: feature:913013-913084:1:exon
so has part: feature:913269-913353:1:exon
so has part: feature:914291-914457:1:exon
so has part: feature:914832-915059:1:exon
so has part: feature:915673-917791:1:exon

position:893812:1
position: 893812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917791:1
position: 917791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:893812-893896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895106-895170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895362-895390:1:exon

position:895362:1
position: 895362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:895493-895653:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:896306-896355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897970-898153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:899553-899719:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901251-901363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:901889-901992:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:902773-902910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:904405-904569:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:904734-904869:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:906833-907099:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:908410-908588:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:911447-911623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:913013-913084:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:913269-913353:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:914291-914457:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:914832-915059:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:915673-917791:1:exon

RBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-like protein 1 isoform X2
translation: MQRQRSLQLLLDSLCVHQGRDLLNPSFKGLPVEFQALGIPGSEEPPCIIALLCELHDGLLVEAKGIKEHYFKPYIAKLFARKILKGDCLLDLCNFTENSKALNKEYEEYVLTVGDFDERVFLGADAEEEIGTRKFPADVAGEKTAARAHMECHLQQHFEKKRSFAPSTPLTGRRYLREKEAAITPVASATQSVSRLQSMVAGLKNAPSEQLTAIFESCARSPLESIVSRVKEIGETFCCSYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGKDLTALLEQDLFHRSLLACCLELVLFAYSSPRTFPWIIDVLDLRPFYFYKVIEVLIRSEEGLSRDMVKHLNSIEEQILESLAWTRNSALWNALEASENKVPTCEEVIFPSNFEASNGGSGFGHLPMMPLSPIVHPRVKEVRTDLGGSLRRDVQPLSPISVHERYSSPTAGSAKRRLFGDDSPKEMQIEKILTKGTKLTIAPASSIGAENMSASPGQTVLTMTTATGPGKAGQKVTIPLHGVANDMGGITLVPISMNLGQPCKVDVQAPCHPPGSQAQEVQLPAASKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSDDVALDKNANPDTEMTEDSSVKAGSSSGRSAAENSSESETEERGDLIKFYNAVYVGRVKSFALKYDITNQDHVVEAPPLSPFPSVRQQGGGGGGGGGGSVRQQPLSPRRVSQQHSVYVSPHKSRNQNKGGACLPPPAALLYRFNGSPSKSLKDINNMIKQGEHRSKKRAITIDSDTESPTKRLCQENDDVLLKRLQDVVSERANR
SIO_010081: RBL1
subclass of: SO_0000673
so part of: RBL1
location: join(895115..895170,895362..895390,895493..895653,896306..896355,897970..898153,899553..899719,901251..901363,901889..901992,902773..902910,904405..904569,904734..904869,906833..907099,908410..908588,911447..911623,913013..913084,913269..913353,914291..914457,914832..915059,915673..915843)
location: region:895115-915843:1
so has part: feature:895115-895170:1:exon
so has part: feature:895362-895390:1:exon
so has part: feature:895493-895653:1:exon
so has part: feature:896306-896355:1:exon
so has part: feature:897970-898153:1:exon
so has part: feature:899553-899719:1:exon
so has part: feature:901251-901363:1:exon
so has part: feature:901889-901992:1:exon
so has part: feature:902773-902910:1:exon
so has part: feature:904405-904569:1:exon
so has part: feature:904734-904869:1:exon
so has part: feature:906833-907099:1:exon
so has part: feature:908410-908588:1:exon
so has part: feature:911447-911623:1:exon
so has part: feature:913013-913084:1:exon
so has part: feature:913269-913353:1:exon
so has part: feature:914291-914457:1:exon
so has part: feature:914832-915059:1:exon
so has part: feature:915673-915843:1:exon

XP_016158683.1
type: Protein
SIO_000068: ncbiprotein

position:895115:1
position: 895115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895115-895170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895362-895390:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:895493-895653:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:896306-896355:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897970-898153:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:899553-899719:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901251-901363:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901889-901992:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:902773-902910:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:904405-904569:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:904734-904869:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:906833-907099:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:908410-908588:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:911447-911623:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:913013-913084:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:913269-913353:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:914291-914457:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:914832-915059:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:915673-915843:1:exon

SAMHD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SAMHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <925754..950754
location: region:925754-950754:1
so has part: feature:925754-950754:1:exon
subclass of: SO_0000010

101817618
type: Gene
SIO_000068: ncbigene

position:925754:1
position: 925754
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:950754:1
position: 950754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925754-950754:1:exon

SAMHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SAMHD1
product: SAM domain and HD domain 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016303287.1
SIO_010081: SAMHD1
subclass of: SO_0000673
so part of: SAMHD1
location: join(<925754..925816,926170..926288,931623..931695,932134..932294,933987..934102,935660..935730,936501..936656,939273..939373,939472..939580,940107..940198,941567..941682,944799..944938,946589..946678,947762..947866,948180..948317,948896..950754)
location: region:925754-950754:1
so has part: feature:925754-925816:1:exon
so has part: feature:926170-926288:1:exon
so has part: feature:931623-931695:1:exon
so has part: feature:932134-932294:1:exon
so has part: feature:933987-934102:1:exon
so has part: feature:935660-935730:1:exon
so has part: feature:936501-936656:1:exon
so has part: feature:939273-939373:1:exon
so has part: feature:939472-939580:1:exon
so has part: feature:940107-940198:1:exon
so has part: feature:941567-941682:1:exon
so has part: feature:944799-944938:1:exon
so has part: feature:946589-946678:1:exon
so has part: feature:947762-947866:1:exon
so has part: feature:948180-948317:1:exon
so has part: feature:948896-950754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:925754-925816:1:exon

position:925816:1
position: 925816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:926170-926288:1:exon

position:926170:1
position: 926170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926288:1
position: 926288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931623-931695:1:exon

position:931623:1
position: 931623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931695:1
position: 931695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:932134-932294:1:exon

position:932134:1
position: 932134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932294:1
position: 932294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:933987-934102:1:exon

position:933987:1
position: 933987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934102:1
position: 934102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:935660-935730:1:exon

position:935660:1
position: 935660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935730:1
position: 935730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:936501-936656:1:exon

position:936501:1
position: 936501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936656:1
position: 936656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:939273-939373:1:exon

position:939273:1
position: 939273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939373:1
position: 939373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:939472-939580:1:exon

position:939472:1
position: 939472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939580:1
position: 939580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:940107-940198:1:exon

position:940107:1
position: 940107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940198:1
position: 940198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:941567-941682:1:exon

position:941567:1
position: 941567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941682:1
position: 941682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:944799-944938:1:exon

position:944799:1
position: 944799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944938:1
position: 944938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:946589-946678:1:exon

position:946589:1
position: 946589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946678:1
position: 946678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:947762-947866:1:exon

position:947762:1
position: 947762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947866:1
position: 947866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:948180-948317:1:exon

position:948180:1
position: 948180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948317:1
position: 948317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:948896-950754:1:exon

position:948896:1
position: 948896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SAMHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SAMHD1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: deoxynucleoside triphosphate triphosphohydrolase SAMHD1
translation: GGHREDAAGPAGLRPRAHPRLLLLLQLQERQRPQCLTEREVLLRRGRVPPFSLGEIRGIDSCPSERLEVLACLRQPRQQHMEVMKVFNDPIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGHLAGCLVRTLKDRQPDLGITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTRPDLKWKHETASVQMFEHLITSNKLEEVMRSYGLVLEEDMLFIKEQIGGPIDETACVKSWPYRGRPKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGISNNFDYKRLLVFTRVCEVENQKHICTRDKEVGNLYEMFHTRNCLHRRAYQHKTGNIIEIMITEAFQKADRFFEIKGSGGKVYRISTAMEDMEAYAKLTDCIYLGILHSSDENLKEAREILHRVERRELYKFLGETRPKSKKEIVKSNSLAESIANSKPKKDPPDVELKAENFIVDVVSMDYGMKEQNPIDNVHFYCKADPSKAVKITQEQVSSLLPRTFMEQVVRVYYKSQDPLIISAAKQYFVQWCMQNDFTKPQDGDVVAPHLIPMEEAWNNMTSXEHRRASEPGCKQRLSFDE
SIO_010081: SAMHD1
subclass of: SO_0000673
so part of: SAMHD1
location: join(<925754..925816,926170..926288,931623..931695,932134..932294,933987..934102,935660..935730,936501..936656,939273..939373,939472..939580,940107..940198,941567..941682,944799..944938,946589..946678,947762..947866,948180..948317,948896..949016)
location: region:925754-949016:1
so has part: feature:925754-925816:1:exon
so has part: feature:926170-926288:1:exon
so has part: feature:931623-931695:1:exon
so has part: feature:932134-932294:1:exon
so has part: feature:933987-934102:1:exon
so has part: feature:935660-935730:1:exon
so has part: feature:936501-936656:1:exon
so has part: feature:939273-939373:1:exon
so has part: feature:939472-939580:1:exon
so has part: feature:940107-940198:1:exon
so has part: feature:941567-941682:1:exon
so has part: feature:944799-944938:1:exon
so has part: feature:946589-946678:1:exon
so has part: feature:947762-947866:1:exon
so has part: feature:948180-948317:1:exon
so has part: feature:948896-949016:1:exon

XP_016158773.1
type: Protein
SIO_000068: ncbiprotein

position:949016:1
position: 949016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:925754-925816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:926170-926288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931623-931695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932134-932294:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933987-934102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:935660-935730:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:936501-936656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:939273-939373:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:939472-939580:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:940107-940198:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:941567-941682:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:944799-944938:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:946589-946678:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:947762-947866:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:948180-948317:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:948896-949016:1:exon

TLDC2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TLDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(953944..958521)
location: region:953944-958521:-1
so has part: feature:953944-958521:-1:exon
subclass of: SO_0000010

101821941
type: Gene
SIO_000068: ncbigene

position:953944:-1
position: 953944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958521:-1
position: 958521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953944-958521:-1:exon

TLDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TLDC2
product: TBC/LysM-associated domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056982.1
SIO_010081: TLDC2
subclass of: SO_0000673
so part of: TLDC2
location: complement(join(953944..954590,957398..957471,958023..958118,958219..958363,958412..958521))
location: region:953944-958521:-1
so has part: feature:958412-958521:-1:exon
so has part: feature:958219-958363:-1:exon
so has part: feature:958023-958118:-1:exon
so has part: feature:957398-957471:-1:exon
so has part: feature:953944-954590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:958412-958521:-1:exon

position:958412:-1
position: 958412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:958219-958363:-1:exon

position:958219:-1
position: 958219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958363:-1
position: 958363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:958023-958118:-1:exon

position:958023:-1
position: 958023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958118:-1
position: 958118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:957398-957471:-1:exon

position:957398:-1
position: 957398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957471:-1
position: 957471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:953944-954590:-1:exon

position:954590:-1
position: 954590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TLDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TLDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLD domain-containing protein 2
translation: MRSQVCAGAGGMLGRAALAEAAVPQLGPQLPPRLTQHPLPPRLTQQPWHLLYSTARDGFSLRTLYRSGARPDSPALLLIRDTEAQAFGAFSASAIRSSSGFYGTGETFLFSFCPELKVFRWTGRNDFFVKGDVNLLMVGGGSGRFGLWLDGDLHRGGSQPCETFDNETLSQREEFCIQDLEMWGLA
SIO_010081: TLDC2
subclass of: SO_0000673
so part of: TLDC2
location: complement(join(954455..954590,957398..957471,958023..958118,958219..958363,958412..958521))
location: region:954455-958521:-1
so has part: feature:958412-958521:-1:exon
so has part: feature:958219-958363:-1:exon
so has part: feature:958023-958118:-1:exon
so has part: feature:957398-957471:-1:exon
so has part: feature:954455-954590:-1:exon

XP_005057039.1
type: Protein
SIO_000068: ncbiprotein

position:954455:-1
position: 954455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:958412-958521:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958219-958363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:958023-958118:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:957398-957471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954455-954590:-1:exon

PIGU
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PIGU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(964105..983236)
location: region:964105-983236:-1
so has part: feature:964105-983236:-1:exon
subclass of: SO_0000010

101822145
type: Gene
SIO_000068: ncbigene

position:964105:-1
position: 964105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983236:-1
position: 983236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964105-983236:-1:exon

PIGU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PIGU
product: phosphatidylinositol glycan anchor biosynthesis class U
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056983.1
SIO_010081: PIGU
subclass of: SO_0000673
so part of: PIGU
location: complement(join(964105..965488,967962..968104,969926..970050,970787..970930,971451..971605,973382..973479,975418..975518,977172..977281,978513..978575,979426..979485,980748..980812,982683..982792,983034..983236))
location: region:964105-983236:-1
so has part: feature:983034-983236:-1:exon
so has part: feature:982683-982792:-1:exon
so has part: feature:980748-980812:-1:exon
so has part: feature:979426-979485:-1:exon
so has part: feature:978513-978575:-1:exon
so has part: feature:977172-977281:-1:exon
so has part: feature:975418-975518:-1:exon
so has part: feature:973382-973479:-1:exon
so has part: feature:971451-971605:-1:exon
so has part: feature:970787-970930:-1:exon
so has part: feature:969926-970050:-1:exon
so has part: feature:967962-968104:-1:exon
so has part: feature:964105-965488:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:983034-983236:-1:exon

position:983034:-1
position: 983034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982683-982792:-1:exon

position:982683:-1
position: 982683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982792:-1
position: 982792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:980748-980812:-1:exon

position:980748:-1
position: 980748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980812:-1
position: 980812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:979426-979485:-1:exon

position:979426:-1
position: 979426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979485:-1
position: 979485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:978513-978575:-1:exon

position:978513:-1
position: 978513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978575:-1
position: 978575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:977172-977281:-1:exon

position:977172:-1
position: 977172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977281:-1
position: 977281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:975418-975518:-1:exon

position:975418:-1
position: 975418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975518:-1
position: 975518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:973382-973479:-1:exon

position:973382:-1
position: 973382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973479:-1
position: 973479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:971451-971605:-1:exon

position:971451:-1
position: 971451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971605:-1
position: 971605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:970787-970930:-1:exon

position:970787:-1
position: 970787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970930:-1
position: 970930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:969926-970050:-1:exon

position:969926:-1
position: 969926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970050:-1
position: 970050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:967962-968104:-1:exon

position:967962:-1
position: 967962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968104:-1
position: 968104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:964105-965488:-1:exon

position:965488:-1
position: 965488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIGU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PIGU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol glycan anchor biosynthesis class U protein
translation: MARRERDATRGHSHPCPPAEEGLSPVAALGKGDPNRTARGTGAGPSLGRSKRAPANLAPPRPPYFRVVPVLAAVTVRAALYRSSLANFIAERVEVASPLNAWKRVVEGLALLDLGVSPYSGAIFHETPLIIYLFHFLIEYAELVFMITDVLTAVALYLAIQDFNKVVFKKQKLLIELDKYAPDVAELIQTPMEMHYIPLKVALFYLLNPYTVMSCVAKSTCAINNSVIAFFILATIKGSAFLSAVFLALATYQSLYPLTLFAPALLYLLQRQFIPIKLKSKSFWLYTMQYASLYLCSLVVIICLSFFLLNSWDFIPSVYGFILSVPDLTPNIGLFWYFFAEMFEHFSLFFVCVFQINVFFYTIPLAIKLKEHPIFFMFVQLAIISIFKSYPTVGDIALYMAFLPVWSHLYRFLRNIFILSCVLIFCSFLFPVLWHLWIYAGSANSNFYYAITLTFNIGQILLVSDYFYAFLRREYYLTHGLHLTRQDGTEAMLVLK
SIO_010081: PIGU
subclass of: SO_0000673
so part of: PIGU
location: complement(join(965375..965488,967962..968104,969926..970050,970787..970930,971451..971605,973382..973479,975418..975518,977172..977281,978513..978575,979426..979485,980748..980812,982683..982792,983034..983236))
location: region:965375-983236:-1
so has part: feature:983034-983236:-1:exon
so has part: feature:982683-982792:-1:exon
so has part: feature:980748-980812:-1:exon
so has part: feature:979426-979485:-1:exon
so has part: feature:978513-978575:-1:exon
so has part: feature:977172-977281:-1:exon
so has part: feature:975418-975518:-1:exon
so has part: feature:973382-973479:-1:exon
so has part: feature:971451-971605:-1:exon
so has part: feature:970787-970930:-1:exon
so has part: feature:969926-970050:-1:exon
so has part: feature:967962-968104:-1:exon
so has part: feature:965375-965488:-1:exon

XP_005057040.1
type: Protein
SIO_000068: ncbiprotein

position:965375:-1
position: 965375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983034-983236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982683-982792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:980748-980812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979426-979485:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978513-978575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:977172-977281:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:975418-975518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973382-973479:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:971451-971605:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:970787-970930:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:969926-970050:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:967962-968104:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:965375-965488:-1:exon

TP53INP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TP53INP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1015299..1023027
location: region:1015299-1023027:1
so has part: feature:1015299-1023027:1:exon
subclass of: SO_0000010

101817824
type: Gene
SIO_000068: ncbigene

position:1015299:1
position: 1015299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023027:1
position: 1023027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1015299-1023027:1:exon

TP53INP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TP53INP2
product: tumor protein p53 inducible nuclear protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303119.1
SIO_010081: TP53INP2
subclass of: SO_0000673
so part of: TP53INP2
location: join(1015299..1015644,1019419..1019550,1020086..1020160,1022954..1023027)
location: region:1015299-1023027:1
so has part: feature:1015299-1015644:1:exon
so has part: feature:1019419-1019550:1:exon
so has part: feature:1020086-1020160:1:exon
so has part: feature:1022954-1023027:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1015299-1015644:1:exon

position:1015644:1
position: 1015644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1019419-1019550:1:exon

position:1019419:1
position: 1019419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019550:1
position: 1019550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1020086-1020160:1:exon

position:1020086:1
position: 1020086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020160:1
position: 1020160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1022954-1023027:1:exon

position:1022954:1
position: 1022954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TP53INP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TP53INP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible nuclear protein 2
translation: MFQRLTSLFFSDSNTPEGLEEPKPFVEEEEEEDGWLIIDLAEEPGLDDVGSSPMEDLLIEHPSMSVYVTSTLEVDGEGPEDDAAECRRVLQPPSIPHLAPDWFSGGVSHRWASRRAKQLPGAFVHQPCQRHCNY
SIO_010081: TP53INP2
subclass of: SO_0000673
so part of: TP53INP2
location: join(1015521..1015644,1019419..1019550,1020086..1020160,1022954..1023027)
location: region:1015521-1023027:1
so has part: feature:1015521-1015644:1:exon
so has part: feature:1019419-1019550:1:exon
so has part: feature:1020086-1020160:1:exon
so has part: feature:1022954-1023027:1:exon

XP_016158605.1
type: Protein
SIO_000068: ncbiprotein

position:1015521:1
position: 1015521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1015521-1015644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1019419-1019550:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020086-1020160:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1022954-1023027:1:exon

LOC107604101
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1024656..1025546)
location: region:1024656-1025546:-1
so has part: feature:1024656-1025546:-1:exon
subclass of: SO_0000010

107604101
type: Gene
SIO_000068: ncbigene

position:1024656:-1
position: 1024656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025546:-1
position: 1025546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1024656-1025546:-1:exon

LOC107604101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604101
product: uncharacterized LOC107604101
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016303256.1
SIO_010081: LOC107604101
subclass of: SO_0000673
so part of: LOC107604101
location: complement(join(1024656..1024988,1025040..1025546))
location: region:1024656-1025546:-1
so has part: feature:1025040-1025546:-1:exon
so has part: feature:1024656-1024988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1025040-1025546:-1:exon

position:1025040:-1
position: 1025040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1024656-1024988:-1:exon

position:1024988:-1
position: 1024988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107604101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107604101
translation: MRRVHRGFPQGISPGVPFPAVGQAQESPVGETRQPLPQDLCSPQPAPLGAAGGALGPQAASDFGGAPEGLAGTQVGRKRTPGAEQAGGWTVLASPPDVCWGWREDASPGAAATEGLIQRRGKSGTDGRTDGRTDGRTDGRTELLPRRSAAQPPPVPQHLPRPGPAPAQERCRGKRKASKPRKPKDVNAPRESGDVRLFTKETPGLEQGDVSAAWRGTAPAQRLWEHGAGE
SIO_010081: LOC107604101
subclass of: SO_0000673
so part of: LOC107604101
location: complement(join(1024682..1024988,1025040..1025425))
location: region:1024682-1025425:-1
so has part: feature:1025040-1025425:-1:exon
so has part: feature:1024682-1024988:-1:exon

XP_016158742.1
type: Protein
SIO_000068: ncbiprotein

position:1024682:-1
position: 1024682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1025425:-1
position: 1025425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025040-1025425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1024682-1024988:-1:exon

NCOA6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NCOA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1032666..1072795)
location: region:1032666-1072795:-1
so has part: feature:1032666-1072795:-1:exon
subclass of: SO_0000010

101818010
type: Gene
SIO_000068: ncbigene

position:1032666:-1
position: 1032666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072795:-1
position: 1072795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032666-1072795:-1:exon

NCOA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NCOA6
product: nuclear receptor coactivator 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056962.2
SIO_010081: NCOA6
subclass of: SO_0000673
so part of: NCOA6
location: complement(join(1032666..1033635,1036529..1036677,1039240..1039276,1041121..1041189,1046883..1047004,1052661..1053780,1054790..1054936,1057676..1058491,1059318..1059446,1062858..1062980,1063528..1063683,1066803..1067077,1067169..1067318,1072664..1072795))
location: region:1032666-1072795:-1
so has part: feature:1072664-1072795:-1:exon
so has part: feature:1067169-1067318:-1:exon
so has part: feature:1066803-1067077:-1:exon
so has part: feature:1063528-1063683:-1:exon
so has part: feature:1062858-1062980:-1:exon
so has part: feature:1059318-1059446:-1:exon
so has part: feature:1057676-1058491:-1:exon
so has part: feature:1054790-1054936:-1:exon
so has part: feature:1052661-1053780:-1:exon
so has part: feature:1046883-1047004:-1:exon
so has part: feature:1041121-1041189:-1:exon
so has part: feature:1039240-1039276:-1:exon
so has part: feature:1036529-1036677:-1:exon
so has part: feature:1032666-1033635:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072664-1072795:-1:exon

position:1072664:-1
position: 1072664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1067169-1067318:-1:exon

position:1067169:-1
position: 1067169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067318:-1
position: 1067318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066803-1067077:-1:exon

position:1066803:-1
position: 1066803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067077:-1
position: 1067077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1063528-1063683:-1:exon

position:1063528:-1
position: 1063528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063683:-1
position: 1063683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1062858-1062980:-1:exon

position:1062858:-1
position: 1062858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062980:-1
position: 1062980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1059318-1059446:-1:exon

position:1059318:-1
position: 1059318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059446:-1
position: 1059446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1057676-1058491:-1:exon

position:1057676:-1
position: 1057676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058491:-1
position: 1058491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1054790-1054936:-1:exon

position:1054790:-1
position: 1054790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054936:-1
position: 1054936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1052661-1053780:-1:exon

position:1052661:-1
position: 1052661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053780:-1
position: 1053780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1046883-1047004:-1:exon

position:1046883:-1
position: 1046883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1047004:-1
position: 1047004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1041121-1041189:-1:exon

position:1041121:-1
position: 1041121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041189:-1
position: 1041189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1039240-1039276:-1:exon

position:1039240:-1
position: 1039240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039276:-1
position: 1039276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1036529-1036677:-1:exon

position:1036529:-1
position: 1036529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036677:-1
position: 1036677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1032666-1033635:-1:exon

position:1033635:-1
position: 1033635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCOA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NCOA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 6
translation: MVLDDLPNLKDTYASLYSSAMEDLEVDFDSGLEEDELKQEAAPGDSTIFVAFKGNISDRDFEQKLDTILKNVPSLLHMESNKLKVQKIEPWNSVRVTFNIPREAAERLRILAQSNNQQLRDLGILSVQIEGEGAINLALAQSRSQDVRINGPLGASTAMRMDTGFPVQGGQGLIRMSNAAAVMMSQGGNVPSSMVASGASAELQPRTPRPSSQPDAMDPLLSGLNIQQQNHPSGSLAPQLHSMQSVPVNRQMNSANFQQLQQQQQLQNRPPQPHQQPQQGLRPSFTSPAQVPVPPGWNQLPSGALQPPPTQGALGTLTVNQGWKKAPLPGQMQQQLQARPSLATVQTPTHPPPPYPFGSQQASQAHSNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQLGPRPPQSSTLPQGFQQPVTSPSRNPMVQQGNLPPNFMVMQQQNQGPQGLHPGLGGMAKRLPPGFPAGQANQNFLQGQVPSTAPGAAGNSGAPQLQTSQSVQHTGGQGSGPPQTQLQAAHGPPNMMQSNLMGLHGNMNNQQAGASGVPQVNMGSMQGQPQQGPQSQLMGMHQQIVSSQGQMVNIQAQGSLNPQNQMILSRTQLMPQGQMMVTPQNQNLGPSPQRMTPPKQMIPQQGQQMMSTHNQMMGPQGQVMLQQNSMMEQMMTTQMQGNKQPFNTQNQSNVMTGPAQLMRGPTPNMQGNMVQFTGQMMAQQGPVNGNPSQVMGMQGQVLRPTGPGPHISQQLGDTATTTNNDGNLPQMLPEVPVQQPNMVPSHMQGMQGNNNASGSHFSGHGLPFNTGFSGTPNGNQVSCGQNPVFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNQNANKPKKKKPPRKKKNNQQLEQTTSSESRPAGLEESDQSSMSGDQGMNLDKSGPKLSDFASRPPASSQHLTQKKSSVATSESTVQRTELETNAAVVAGQSNETKENCEKSKTPSRRNSRTEDSATSQETVENGQRKRSSRPASTSSTAKETSASAMQSKRRKSK
SIO_010081: NCOA6
subclass of: SO_0000673
so part of: NCOA6
location: complement(join(1033589..1033635,1036529..1036677,1039240..1039276,1041121..1041189,1046883..1047004,1052661..1053780,1054790..1054936,1057676..1058491,1059318..1059446,1062858..1062980,1063528..1063683,1066803..1067037))
location: region:1033589-1067037:-1
so has part: feature:1066803-1067037:-1:exon
so has part: feature:1063528-1063683:-1:exon
so has part: feature:1062858-1062980:-1:exon
so has part: feature:1059318-1059446:-1:exon
so has part: feature:1057676-1058491:-1:exon
so has part: feature:1054790-1054936:-1:exon
so has part: feature:1052661-1053780:-1:exon
so has part: feature:1046883-1047004:-1:exon
so has part: feature:1041121-1041189:-1:exon
so has part: feature:1039240-1039276:-1:exon
so has part: feature:1036529-1036677:-1:exon
so has part: feature:1033589-1033635:-1:exon

XP_005057019.1
type: Protein
SIO_000068: ncbiprotein

position:1033589:-1
position: 1033589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067037:-1
position: 1067037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066803-1067037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1063528-1063683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062858-1062980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1059318-1059446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1057676-1058491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1054790-1054936:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1052661-1053780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1046883-1047004:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041121-1041189:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1039240-1039276:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1036529-1036677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1033589-1033635:-1:exon

GGT7
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GGT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1083444..1105469)
location: region:1083444-1105469:-1
so has part: feature:1083444-1105469:-1:exon
subclass of: SO_0000010

101805688
type: Gene
SIO_000068: ncbigene

position:1083444:-1
position: 1083444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105469:-1
position: 1105469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083444-1105469:-1:exon

GGT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GGT7
product: gamma-glutamyltransferase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303317.1
SIO_010081: GGT7
subclass of: SO_0000673
so part of: GGT7
location: complement(join(1083444..1087927,1089360..1089459,1090371..1090508,1090970..1091087,1091580..1091642,1092019..1092099,1092865..1092953,1095947..1096074,1097247..1097334,1099395..1099588,1100041..1100114,1100772..1100839,1101380..1101494,1103077..1103172,1103500..1103555,1104660..1104886,1105412..1105469))
location: region:1083444-1105469:-1
so has part: feature:1105412-1105469:-1:exon
so has part: feature:1104660-1104886:-1:exon
so has part: feature:1103500-1103555:-1:exon
so has part: feature:1103077-1103172:-1:exon
so has part: feature:1101380-1101494:-1:exon
so has part: feature:1100772-1100839:-1:exon
so has part: feature:1100041-1100114:-1:exon
so has part: feature:1099395-1099588:-1:exon
so has part: feature:1097247-1097334:-1:exon
so has part: feature:1095947-1096074:-1:exon
so has part: feature:1092865-1092953:-1:exon
so has part: feature:1092019-1092099:-1:exon
so has part: feature:1091580-1091642:-1:exon
so has part: feature:1090970-1091087:-1:exon
so has part: feature:1090371-1090508:-1:exon
so has part: feature:1089360-1089459:-1:exon
so has part: feature:1083444-1087927:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1105412-1105469:-1:exon

position:1105412:-1
position: 1105412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104660-1104886:-1:exon

position:1104660:-1
position: 1104660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104886:-1
position: 1104886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1103500-1103555:-1:exon

position:1103500:-1
position: 1103500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103555:-1
position: 1103555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1103077-1103172:-1:exon

position:1103077:-1
position: 1103077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103172:-1
position: 1103172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1101380-1101494:-1:exon

position:1101380:-1
position: 1101380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101494:-1
position: 1101494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1100772-1100839:-1:exon

position:1100772:-1
position: 1100772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100839:-1
position: 1100839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1100041-1100114:-1:exon

position:1100041:-1
position: 1100041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100114:-1
position: 1100114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1099395-1099588:-1:exon

position:1099395:-1
position: 1099395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1099588:-1
position: 1099588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1097247-1097334:-1:exon

position:1097247:-1
position: 1097247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1097334:-1
position: 1097334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1095947-1096074:-1:exon

position:1095947:-1
position: 1095947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096074:-1
position: 1096074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1092865-1092953:-1:exon

position:1092865:-1
position: 1092865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092953:-1
position: 1092953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1092019-1092099:-1:exon

position:1092019:-1
position: 1092019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092099:-1
position: 1092099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1091580-1091642:-1:exon

position:1091580:-1
position: 1091580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091642:-1
position: 1091642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1090970-1091087:-1:exon

position:1090970:-1
position: 1090970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091087:-1
position: 1091087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1090371-1090508:-1:exon

position:1090371:-1
position: 1090371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090508:-1
position: 1090508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1089360-1089459:-1:exon

position:1089360:-1
position: 1089360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089459:-1
position: 1089459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1083444-1087927:-1:exon

position:1087927:-1
position: 1087927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GGT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GGT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-glutamyltransferase 7
translation: MGSQEVSPLQETSKDPFSGDCSCRQDGLTVIITACLTFATGVTVALIMQIYFGDPQLFQRGAVVTDAARCTALGTRVLARRGSSVDAAIASALCAGIVNPHASGLGGGGVMLVHDIRKNRSWVIDFREVAPLGIPLEGDLQQDTKPGLLVGVPGMIQGMHQAHQLHGRLPWSELLGLTAGVAQNGFNVTHDLAKALSELKDLNFSDRFHELFLPGGQPLLPGMFVRRPDLAAVLQLLGAEGVSAFYSGNLTQEIVSEVHNYGGVLVEEDFSNYSVTVEEPVHTIYRGHLVFTPPPPHAGPALITALNILEGFNITRQGSRGNILHWIAETLKIALSLASNLGDPSGDVSVTHTAEGMVSQSEASSLRQLINGSQSFPPEPRSALQSGSAASQVLVMGPDDFIVAVVSSLNRPFGSGIVTPSGILLNSQMLDFSWQNKTMNHSIPRLQNLLQPRKRPRSFLLPTIVRPSEGMCGTYLCLGANNGDRALSSIVQVLVNVLSFHKNLSESLSLGRLHPQLQSNTLQVDSEFPEEDIEFLVARGHQVEKVPVVSLVHGARRTNSFIIGLQDPRSADAAGATTL
SIO_010081: GGT7
subclass of: SO_0000673
so part of: GGT7
location: complement(join(1087764..1087927,1089360..1089459,1090371..1090508,1090970..1091087,1091580..1091642,1092019..1092099,1092865..1092953,1095947..1096074,1097247..1097334,1099395..1099588,1100041..1100114,1100772..1100839,1101380..1101494,1103077..1103172,1103500..1103555,1104660..1104827))
location: region:1087764-1104827:-1
so has part: feature:1104660-1104827:-1:exon
so has part: feature:1103500-1103555:-1:exon
so has part: feature:1103077-1103172:-1:exon
so has part: feature:1101380-1101494:-1:exon
so has part: feature:1100772-1100839:-1:exon
so has part: feature:1100041-1100114:-1:exon
so has part: feature:1099395-1099588:-1:exon
so has part: feature:1097247-1097334:-1:exon
so has part: feature:1095947-1096074:-1:exon
so has part: feature:1092865-1092953:-1:exon
so has part: feature:1092019-1092099:-1:exon
so has part: feature:1091580-1091642:-1:exon
so has part: feature:1090970-1091087:-1:exon
so has part: feature:1090371-1090508:-1:exon
so has part: feature:1089360-1089459:-1:exon
so has part: feature:1087764-1087927:-1:exon

XP_016158803.1
type: Protein
SIO_000068: ncbiprotein

position:1087764:-1
position: 1087764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104827:-1
position: 1104827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104660-1104827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103500-1103555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103077-1103172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1101380-1101494:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100772-1100839:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1100041-1100114:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099395-1099588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1097247-1097334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1095947-1096074:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092865-1092953:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1092019-1092099:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1091580-1091642:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090970-1091087:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1090371-1090508:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1089360-1089459:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1087764-1087927:-1:exon

C20H20orf24
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: C20H20orf24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1112017..1116490)
location: region:1112017-1116490:-1
so has part: feature:1112017-1116490:-1:exon
subclass of: SO_0000010

101818333
type: Gene
SIO_000068: ncbigene

position:1112017:-1
position: 1112017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116490:-1
position: 1116490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112017-1116490:-1:exon

C20H20orf24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: C20H20orf24
product: chromosome 20 open reading frame, human C20orf24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005056964.2
SIO_010081: C20H20orf24
subclass of: SO_0000673
so part of: C20H20orf24
location: complement(join(1112017..1113740,1114327..1114456,1116282..1116490))
location: region:1112017-1116490:-1
so has part: feature:1116282-1116490:-1:exon
so has part: feature:1114327-1114456:-1:exon
so has part: feature:1112017-1113740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1116282-1116490:-1:exon

position:1116282:-1
position: 1116282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1114327-1114456:-1:exon

position:1114327:-1
position: 1114327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114456:-1
position: 1114456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1112017-1113740:-1:exon

position:1113740:-1
position: 1113740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C20H20orf24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: C20H20orf24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C20orf24 homolog
translation: MLNFHLLIVWCFKNKKRNKCQNFSCALSPQDEFLDVIYWFRQIIAVILGIIWGVVPLKGFVGIAVFCLINAGVLYLYFSSFQQIDEEEYGGTWELTKEGFMTSFALFLVVWIIFYTAIHYD
SIO_010081: C20H20orf24
subclass of: SO_0000673
so part of: C20H20orf24
location: complement(join(1113699..1113740,1114327..1114456,1116282..1116475))
location: region:1113699-1116475:-1
so has part: feature:1116282-1116475:-1:exon
so has part: feature:1114327-1114456:-1:exon
so has part: feature:1113699-1113740:-1:exon

XP_005057021.1
type: Protein
SIO_000068: ncbiprotein

position:1113699:-1
position: 1113699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1116475:-1
position: 1116475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116282-1116475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1114327-1114456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1113699-1113740:-1:exon

MYL9
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MYL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1124901..1136088
location: region:1124901-1136088:1
so has part: feature:1124901-1136088:1:exon
subclass of: SO_0000010

101818675
type: Gene
SIO_000068: ncbigene

position:1124901:1
position: 1124901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136088:1
position: 1136088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1124901-1136088:1:exon

MYL9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MYL9
product: myosin light chain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005056965.1
SIO_010081: MYL9
subclass of: SO_0000673
so part of: MYL9
location: join(1124901..1125004,1132884..1133087,1134110..1134271,1135414..1136088)
location: region:1124901-1136088:1
so has part: feature:1124901-1125004:1:exon
so has part: feature:1132884-1133087:1:exon
so has part: feature:1134110-1134271:1:exon
so has part: feature:1135414-1136088:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1124901-1125004:1:exon

position:1125004:1
position: 1125004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1132884-1133087:1:exon

position:1132884:1
position: 1132884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133087:1
position: 1133087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1134110-1134271:1:exon

position:1134110:1
position: 1134110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134271:1
position: 1134271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1135414-1136088:1:exon

position:1135414:1
position: 1135414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYL9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MYL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light polypeptide 9
translation: MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASLGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD
SIO_010081: MYL9
subclass of: SO_0000673
so part of: MYL9
location: join(1132904..1133087,1134110..1134271,1135414..1135586)
location: region:1132904-1135586:1
so has part: feature:1132904-1133087:1:exon
so has part: feature:1134110-1134271:1:exon
so has part: feature:1135414-1135586:1:exon

XP_005057022.1
type: Protein
SIO_000068: ncbiprotein

position:1132904:1
position: 1132904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135586:1
position: 1135586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132904-1133087:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1134110-1134271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135414-1135586:1:exon

DLGAP4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DLGAP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<1161366..1287521)
location: region:1161366-1287521:-1
so has part: feature:1161366-1287521:-1:exon
subclass of: SO_0000010

101806073
type: Gene
SIO_000068: ncbigene

position:1161366:-1
position: 1161366
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:1287521:-1
position: 1287521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161366-1287521:-1:exon

DLGAP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DLGAP4
product: discs large homolog associated protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303120.1
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: complement(join(<1161366..1161578,1162626..1162778,1163915..1164006,1166339..1166748,1167163..1167254,1168547..1168908,1210898..1211093,1212411..1212461,1215530..1215644,1220160..1220377,1227158..1227295,1228621..1229638,1235715..1235808,1287316..1287521))
location: region:1161366-1287521:-1
so has part: feature:1287316-1287521:-1:exon
so has part: feature:1235715-1235808:-1:exon
so has part: feature:1228621-1229638:-1:exon
so has part: feature:1227158-1227295:-1:exon
so has part: feature:1220160-1220377:-1:exon
so has part: feature:1215530-1215644:-1:exon
so has part: feature:1212411-1212461:-1:exon
so has part: feature:1210898-1211093:-1:exon
so has part: feature:1168547-1168908:-1:exon
so has part: feature:1167163-1167254:-1:exon
so has part: feature:1166339-1166748:-1:exon
so has part: feature:1163915-1164006:-1:exon
so has part: feature:1162626-1162778:-1:exon
so has part: feature:1161366-1161578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1287316-1287521:-1:exon

position:1287316:-1
position: 1287316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235715-1235808:-1:exon

position:1235715:-1
position: 1235715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235808:-1
position: 1235808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1228621-1229638:-1:exon

position:1228621:-1
position: 1228621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1229638:-1
position: 1229638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1227158-1227295:-1:exon

position:1227158:-1
position: 1227158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227295:-1
position: 1227295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1220160-1220377:-1:exon

position:1220160:-1
position: 1220160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220377:-1
position: 1220377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1215530-1215644:-1:exon

position:1215530:-1
position: 1215530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215644:-1
position: 1215644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1212411-1212461:-1:exon

position:1212411:-1
position: 1212411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212461:-1
position: 1212461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1210898-1211093:-1:exon

position:1210898:-1
position: 1210898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211093:-1
position: 1211093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1168547-1168908:-1:exon

position:1168547:-1
position: 1168547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168908:-1
position: 1168908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1167163-1167254:-1:exon

position:1167163:-1
position: 1167163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167254:-1
position: 1167254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1166339-1166748:-1:exon

position:1166339:-1
position: 1166339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166748:-1
position: 1166748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1163915-1164006:-1:exon

position:1163915:-1
position: 1163915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164006:-1
position: 1164006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1162626-1162778:-1:exon

position:1162626:-1
position: 1162626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162778:-1
position: 1162778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1161366-1161578:-1:exon

position:1161578:-1
position: 1161578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLGAP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DLGAP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4
translation: MKGLGDNRSRHLSENLDSPQDSLYAPQDRNPYLLSPTDSFTMDPRFPAQSAVHGDCLLPLNNQISNSSTFPRIHYNSHFEVPDDNPFPSHAQATKINRLPANLLDQFEKQLPIHRDGFSTLQFQRSDAKHRSESPGRIRHLVHSVQKLFAKSQSLEGPTKGNVNGKKGADDAKQNRRSKSKDRAKTSEPKRRTRSNISGWWSSDDNLDSDTCSYRNPMGLMTLGRQPDHSQPKYFMHAYNTISEHMLKSSKSNNDLKVTPCTNIPINNDSNYIKRGSWSTLTLSHAREVCQKASATIDKALLKSKSCHQDLAYHYLQPDAGLRAQLGGTGLASSWAAPPLGWEDTGHWDQPLSPGPTDAGSAQVPHGEWNSTLSRDKDSEIPCRRMRSGSYIKAMGDDDSEDSETSPKPSPKTAARRQSYLKATQQSLSEQSTTQRSLDRLDSVEILLPPKFPTWEEEYNQISDSVNESSCINQMFGPPSLIPQIFTHGEQPREAESAAAEVLDLPLPSYFRSRSHSYLRAIQAGCSQEDDTGSVRSISPPPAGSLSGSRTLPTNSSSSCLVAYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDSQDHKSEVTSQSGLSNSSDSLDSTRTPSVTRGSVVTPARDTPELPQKNATLKSDKGTLTNEEPKAENIPKRKLSSIGIQVDCLQPVAKEEPPPPATKFQSIGVQVEDEWRNSHSRSMSSKQDTDSDTQEPNNSSCKSSERSLAECPQHNNSVGVDASTRQPAKPSQIKRNLSYGENNDPALEPSSLPPPDPWLESSSTSPSEPAPPGPCRRDGFWFLKLLQAETERLEGWCRQMDQETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFHGLCEQNLNPNANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLAETPERKEEKKPPPPVPKKPAKSKSQLSREKGSDSDKQRQEARKRLMAAKRAASVRQNSATESADSIEIYVPEAQTRL
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: complement(join(<1161366..1161578,1162626..1162778,1163915..1164006,1166339..1166748,1167163..1167254,1168547..1168908,1210898..1211093,1212411..1212461,1215530..1215644,1220160..1220377,1227158..1227295,1228621..1229571))
location: region:1161366-1229571:-1
so has part: feature:1228621-1229571:-1:exon
so has part: feature:1227158-1227295:-1:exon
so has part: feature:1220160-1220377:-1:exon
so has part: feature:1215530-1215644:-1:exon
so has part: feature:1212411-1212461:-1:exon
so has part: feature:1210898-1211093:-1:exon
so has part: feature:1168547-1168908:-1:exon
so has part: feature:1167163-1167254:-1:exon
so has part: feature:1166339-1166748:-1:exon
so has part: feature:1163915-1164006:-1:exon
so has part: feature:1162626-1162778:-1:exon
so has part: feature:1161366-1161578:-1:exon

XP_016158606.1
type: Protein
SIO_000068: ncbiprotein

position:1229571:-1
position: 1229571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228621-1229571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1227158-1227295:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220160-1220377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215530-1215644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212411-1212461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1210898-1211093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1168547-1168908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1167163-1167254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1166339-1166748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1163915-1164006:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1162626-1162778:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1161366-1161578:-1:exon

AAR2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: AAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1359481..1370184)
location: region:1359481-1370184:-1
so has part: feature:1359481-1370184:-1:exon
subclass of: SO_0000010

101806258
type: Gene
SIO_000068: ncbigene

position:1359481:-1
position: 1359481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370184:-1
position: 1370184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359481-1370184:-1:exon

AAR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AAR2
product: AAR2 splicing factor homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056987.1
SIO_010081: AAR2
subclass of: SO_0000673
so part of: AAR2
location: complement(join(1359481..1361252,1364647..1364876,1365915..1366076,1370160..1370184))
location: region:1359481-1370184:-1
so has part: feature:1370160-1370184:-1:exon
so has part: feature:1365915-1366076:-1:exon
so has part: feature:1364647-1364876:-1:exon
so has part: feature:1359481-1361252:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1370160-1370184:-1:exon

position:1370160:-1
position: 1370160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1365915-1366076:-1:exon

position:1365915:-1
position: 1365915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366076:-1
position: 1366076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1364647-1364876:-1:exon

position:1364647:-1
position: 1364647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364876:-1
position: 1364876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1359481-1361252:-1:exon

position:1361252:-1
position: 1361252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AAR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AAR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein AAR2 homolog
translation: MPEQECLSRPRDGTQIRFSELPRQAFPAGASPAEITRHSMDLSYALQRVMEQRYPGRPLGLLAELQFAFICFLIGNVYDAFEHWKRLLNILCRSEEAMGKYQDLYINLISVLYHQLNEIPADFFVDIVSQDNFLTSTLQVLFSCTCSSAVDETLRKKAEKFKAHLTKKFKWDFEAEPDDCAPVVVQLPEGVQVD
SIO_010081: AAR2
subclass of: SO_0000673
so part of: AAR2
location: complement(join(1361085..1361252,1364647..1364876,1365915..1366076,1370160..1370184))
location: region:1361085-1370184:-1
so has part: feature:1370160-1370184:-1:exon
so has part: feature:1365915-1366076:-1:exon
so has part: feature:1364647-1364876:-1:exon
so has part: feature:1361085-1361252:-1:exon

XP_005057044.1
type: Protein
SIO_000068: ncbiprotein

position:1361085:-1
position: 1361085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1370160-1370184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1365915-1366076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1364647-1364876:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361085-1361252:-1:exon

EPB41L1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1369023..1433999)
location: region:1369023-1433999:-1
so has part: feature:1369023-1433999:-1:exon
subclass of: SO_0000010

101819004
type: Gene
SIO_000068: ncbigene

position:1369023:-1
position: 1369023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1433999:-1
position: 1433999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1369023-1433999:-1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056967.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: complement(join(1369023..1371973,1373039..1373155,1374032..1374112,1374934..1375029,1375901..1375963,1376131..1376211,1376602..1376694,1378041..1378439,1379542..1379649,1380183..1382711,1386938..1387036,1388741..1388932,1390649..1390684,1391168..1391316,1392130..1392305,1392433..1392530,1393191..1393343,1393598..1393685,1393769..1393987,1394149..1394224,1394861..1394903,1394980..1395084,1397283..1397447,1399121..1399311,1429961..1430010,1433707..1433999))
location: region:1369023-1433999:-1
so has part: feature:1433707-1433999:-1:exon
so has part: feature:1429961-1430010:-1:exon
so has part: feature:1399121-1399311:-1:exon
so has part: feature:1397283-1397447:-1:exon
so has part: feature:1394980-1395084:-1:exon
so has part: feature:1394861-1394903:-1:exon
so has part: feature:1394149-1394224:-1:exon
so has part: feature:1393769-1393987:-1:exon
so has part: feature:1393598-1393685:-1:exon
so has part: feature:1393191-1393343:-1:exon
so has part: feature:1392433-1392530:-1:exon
so has part: feature:1392130-1392305:-1:exon
so has part: feature:1391168-1391316:-1:exon
so has part: feature:1390649-1390684:-1:exon
so has part: feature:1388741-1388932:-1:exon
so has part: feature:1386938-1387036:-1:exon
so has part: feature:1380183-1382711:-1:exon
so has part: feature:1379542-1379649:-1:exon
so has part: feature:1378041-1378439:-1:exon
so has part: feature:1376602-1376694:-1:exon
so has part: feature:1376131-1376211:-1:exon
so has part: feature:1375901-1375963:-1:exon
so has part: feature:1374934-1375029:-1:exon
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so has part: feature:1369023-1371973:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1433707-1433999:-1:exon

position:1433707:-1
position: 1433707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1429961-1430010:-1:exon

position:1429961:-1
position: 1429961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1430010:-1
position: 1430010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1399121-1399311:-1:exon

position:1399121:-1
position: 1399121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399311:-1
position: 1399311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1397283-1397447:-1:exon

position:1397283:-1
position: 1397283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397447:-1
position: 1397447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1394980-1395084:-1:exon

position:1394980:-1
position: 1394980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395084:-1
position: 1395084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1394861-1394903:-1:exon

position:1394861:-1
position: 1394861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394903:-1
position: 1394903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1394149-1394224:-1:exon

position:1394149:-1
position: 1394149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394224:-1
position: 1394224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1393769-1393987:-1:exon