Ficedula albicollis isolate OC2 chromosome 19, FicAlb1.5, whole genome shotgun sequence.
type: Entry
definition: Ficedula albicollis isolate OC2 chromosome 19, FicAlb1.5, whole genome shotgun sequence.
sequence version: NC_021690.1
sequence date: 2016-04-20
sequence: sequence
division: CON
label: NC_021690.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA208061
dblink: SAMN02981387
keyword: WGS
keyword: RefSeq
source: Ficedula albicollis (collared flycatcher)
organism: Ficedula albicollis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
reference: 1
references: 23103876
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002007.1.\nAssembly name: FicAlb1.5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Uppsala University on 2013/06/24.\nThe original whole-genome shotgun project has the accession\nAGTO00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: FicAlb1.5\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina GAII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Ficedula albicollis Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 11933672
topology: linear
so has quality: SO_0000987
location: 1..11933672
location: region:1-11933672:1
RO_0002162: 59894

NC_021690
type: RefSeq
SIO_000068: refseq

PRJNA208061
type: BioProject
SIO_000068: bioproject

SAMN02981387
type: BioSample
SIO_000068: biosample

1
title: The genomic landscape of species divergence in Ficedula flycatchers
author: Ellegren, H.
author: Smeds, L.
author: Burri, R.
author: Olason, P.I.
author: Backstrom, N.
author: Kawakami, T.
author: Kunstner, A.
author: Makinen, H.
author: Nadachowska-Brzyska, K.
author: Qvarnstrom, A.
author: Uebbing, S.
author: Wolf, J.B.
journal: Nature
volume: 491
issue: 7426
pages: 756-760
year: 2012
pubmed: 23103876

23103876
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11933672:1
position: 11933672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11933672:1:source
so part of: sequence
organism: Ficedula albicollis
mol type: genomic DNA
isolate: OC2
chromosome: 19
sex: male
country: Sweden: Oland
collection date: 2009

59894
type: Taxonomy
SIO_000068: taxonomy

LOC101818404
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101818404
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15537..20286
location: region:15537-20286:1
so has part: feature:15537-20286:1:exon
subclass of: SO_0000010

101818404
type: Gene
SIO_000068: ncbigene

position:15537:1
position: 15537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20286:1
position: 20286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15537-20286:1:exon

LOC101818404
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101818404
product: hydroperoxide isomerase ALOXE3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016302933.1
SIO_010081: LOC101818404
subclass of: SO_0000673
so part of: LOC101818404
location: join(15537..15674,16061..16259,16332..16413,16507..16629,16728..16831,16942..17264,17340..17543,17675..17761,18366..18535,18612..18733,18826..18926,19352..19522,19742..20286)
location: region:15537-20286:1
so has part: feature:15537-15674:1:exon
so has part: feature:16061-16259:1:exon
so has part: feature:16332-16413:1:exon
so has part: feature:16507-16629:1:exon
so has part: feature:16728-16831:1:exon
so has part: feature:16942-17264:1:exon
so has part: feature:17340-17543:1:exon
so has part: feature:17675-17761:1:exon
so has part: feature:18366-18535:1:exon
so has part: feature:18612-18733:1:exon
so has part: feature:18826-18926:1:exon
so has part: feature:19352-19522:1:exon
so has part: feature:19742-20286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15537-15674:1:exon

position:15674:1
position: 15674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16061-16259:1:exon

position:16061:1
position: 16061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16259:1
position: 16259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16332-16413:1:exon

position:16332:1
position: 16332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16413:1
position: 16413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16507-16629:1:exon

position:16507:1
position: 16507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16629:1
position: 16629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16728-16831:1:exon

position:16728:1
position: 16728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16831:1
position: 16831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16942-17264:1:exon

position:16942:1
position: 16942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17264:1
position: 17264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:17340-17543:1:exon

position:17340:1
position: 17340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17543:1
position: 17543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17675-17761:1:exon

position:17675:1
position: 17675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17761:1
position: 17761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:18366-18535:1:exon

position:18366:1
position: 18366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18535:1
position: 18535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:18612-18733:1:exon

position:18612:1
position: 18612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18733:1
position: 18733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:18826-18926:1:exon

position:18826:1
position: 18826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18926:1
position: 18926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:19352-19522:1:exon

position:19352:1
position: 19352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19522:1
position: 19522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:19742-20286:1:exon

position:19742:1
position: 19742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101818404
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101818404
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroperoxide isomerase ALOXE3
translation: MAVYKVTVATGDMVEAGTNNSISITLVGSYGESRRTTVSFLFLPGKERSLSVHCGQDLGPIVLIRLHKWRLFLEDAWFCKDVRVTAPNGTLYRFPCYQWLEGVTTVEVREGSGKKLVDDKLQILKEHRSQELAARQEAYRWKNFAQGWPRCLNVDSIFELDSNIQFSRIRANNFTGFLIFQGASHFLSGFLLRRTSWNSLDEMRTVFSRTQGRDIVPEYVAKHWQEDDFFGYQFLNGNNPIIIHRCTTLPLNFPVTPEMVAGSLGGGTDLGKELQEGRIFIVDYKVLEDIPTDTIYGRQQHIAAPLCLLHQGIDGLLRPIAIQLSQTPGPCSPIFLPSDDEWDWLLAKTWVRNADFYSHQLLTHLLRTHLFGEVFAIATLRHLPTCHPLFKLLMPHFHFTLHINTLARTVLINRGGLIDKGSGVTYEGLLLVVQQGLEQVTYTSLCLPDDICHRGMSHVPNYHYRDDGMRLWEAIESFVSGIVTFYYRGDAAVSGDTELQAWVMDIFTNGFLGRTSSGVPSSLQTVAELIKFLTMVMFTCSAQHAAVNNGQYDLGAFVPNAPSSMRHPPPCEKGRAFLQHFLDTIPEVATTANILVALILLSSQLKDRRLLGQYPEEWFTEAEPRRLIRAFQGRLEEIRDRIEERNHLAELRYNYLNPLETENSISI
SIO_010081: LOC101818404
subclass of: SO_0000673
so part of: LOC101818404
location: join(15537..15674,16061..16259,16332..16413,16507..16629,16728..16831,16942..17264,17340..17543,17675..17761,18366..18535,18612..18733,18826..18926,19352..19522,19742..19921)
location: region:15537-19921:1
so has part: feature:15537-15674:1:exon
so has part: feature:16061-16259:1:exon
so has part: feature:16332-16413:1:exon
so has part: feature:16507-16629:1:exon
so has part: feature:16728-16831:1:exon
so has part: feature:16942-17264:1:exon
so has part: feature:17340-17543:1:exon
so has part: feature:17675-17761:1:exon
so has part: feature:18366-18535:1:exon
so has part: feature:18612-18733:1:exon
so has part: feature:18826-18926:1:exon
so has part: feature:19352-19522:1:exon
so has part: feature:19742-19921:1:exon

XP_016158419.1
type: Protein
SIO_000068: ncbiprotein

position:19921:1
position: 19921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15537-15674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16061-16259:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16332-16413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16507-16629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16728-16831:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16942-17264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17340-17543:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17675-17761:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18366-18535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:18612-18733:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:18826-18926:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19352-19522:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19742-19921:1:exon

LOC101811347
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101811347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 28592..32806
location: region:28592-32806:1
so has part: feature:28592-32806:1:exon
subclass of: SO_0000010

101811347
type: Gene
SIO_000068: ncbigene

position:28592:1
position: 28592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32806:1
position: 32806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28592-32806:1:exon

LOC101811347
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811347
product: zinc finger protein 239-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_016303092.1
SIO_010081: LOC101811347
subclass of: SO_0000673
so part of: LOC101811347
location: join(28592..28728,29611..29689,29875..32806)
location: region:28592-32806:1
so has part: feature:28592-28728:1:exon
so has part: feature:29611-29689:1:exon
so has part: feature:29875-32806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28592-28728:1:exon

position:28728:1
position: 28728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29611-29689:1:exon

position:29611:1
position: 29611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29689:1
position: 29689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:29875-32806:1:exon

position:29875:1
position: 29875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101811347
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 239-like
translation: MEDEAAVKREMPWDSEAGNELQTEIKEEKSAWQNAVAEAILSGSMAQESNGEEKPQRSLTRRDCKPSPMCTKEERSLLSWEDGQSFSQSSEQVEKPHVGEKPYKCLECGKSFSRSFHLLRHQMIHTGERPYECLECGKSFSRSSCLIRHQVIHTGERPYMCKECGKSFSDRSNLLTHQRLHARERPYQCGKCGKSFSISSDLIQHQKIHSGERPYECPECAKRFRTSSHLLLHQRIHTDERPFRCCHCGKGFKRNSHLVSHVRVHTGERPYECPECGKSFSHSSALTSHQQTHD
SIO_010081: LOC101811347
subclass of: SO_0000673
so part of: LOC101811347
location: join(29638..29689,29875..30707)
location: region:29638-30707:1
so has part: feature:29638-29689:1:exon
so has part: feature:29875-30707:1:exon

XP_016158578.1
type: Protein
SIO_000068: ncbiprotein

position:29638:1
position: 29638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30707:1
position: 30707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29638-29689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29875-30707:1:exon

LOC101818613
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101818613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(34778..37312)
location: region:34778-37312:-1
so has part: feature:34778-37312:-1:exon
subclass of: SO_0000010

101818613
type: Gene
SIO_000068: ncbigene

position:34778:-1
position: 34778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37312:-1
position: 37312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34778-37312:-1:exon

LOC101818613
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101818613
product: class II histocompatibility antigen, B-L beta chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 276 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016302871.1
SIO_010081: LOC101818613
subclass of: SO_0000673
so part of: LOC101818613
location: complement(join(34778..34926,35070..35174,35759..36040,36665..36934,37228..37312))
location: region:34778-37312:-1
so has part: feature:37228-37312:-1:exon
so has part: feature:36665-36934:-1:exon
so has part: feature:35759-36040:-1:exon
so has part: feature:35070-35174:-1:exon
so has part: feature:34778-34926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:37228-37312:-1:exon

position:37228:-1
position: 37228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36665-36934:-1:exon

position:36665:-1
position: 36665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36934:-1
position: 36934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35759-36040:-1:exon

position:35759:-1
position: 35759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36040:-1
position: 36040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35070-35174:-1:exon

position:35070:-1
position: 35070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35174:-1
position: 35174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:34778-34926:-1:exon

position:34926:-1
position: 34926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101818613
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101818613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: class II histocompatibility antigen, B-L beta chain-like
translation: MERVAAAGAVLVPLVVLGVFLAAGAELSEVFQEMVKSECHFINGTSRVRFVKRFVYNREQYVHFDSDVGHFVGDSPYGEKVARYWNRDPEWMEYRRDAVDRHCRHNYELSSPFLVERRVPPSVSISLVPSSSQSGPGRLLCSVMDFYPAEIQVRWFQGQQELSEHVVATDVVPNGDLTYQVLVLLETPPRRRVSYTCQVEHVSLEHPLRRQWEMQLNATRSKVLMGIGGSVLGFVFFALCLGFYLHKKLLSLQQPPHGLGPGRDPPLCPRADFGGVVCPPNPAVTLPPPSCSQCSQ
SIO_010081: LOC101818613
subclass of: SO_0000673
so part of: LOC101818613
location: complement(join(34778..34926,35070..35174,35759..36040,36665..36934,37228..37312))
location: region:34778-37312:-1
so has part: feature:37228-37312:-1:exon
so has part: feature:36665-36934:-1:exon
so has part: feature:35759-36040:-1:exon
so has part: feature:35070-35174:-1:exon
so has part: feature:34778-34926:-1:exon

XP_016158357.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37228-37312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36665-36934:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35759-36040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35070-35174:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34778-34926:-1:exon

LOC101818805
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101818805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 41545..46783
location: region:41545-46783:1
so has part: feature:41545-46783:1:exon
subclass of: SO_0000010

101818805
type: Gene
SIO_000068: ncbigene

position:41545:1
position: 41545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46783:1
position: 46783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41545-46783:1:exon

LOC101818805
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101818805
product: cilia- and flagella-associated protein 45-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016302936.1
SIO_010081: LOC101818805
subclass of: SO_0000673
so part of: LOC101818805
location: join(41545..41718,41888..42018,42325..42466,43750..43923,44214..44392,44607..44736,44974..45120,45526..45639,45852..46045,46253..46477,46639..46783)
location: region:41545-46783:1
so has part: feature:41545-41718:1:exon
so has part: feature:41888-42018:1:exon
so has part: feature:42325-42466:1:exon
so has part: feature:43750-43923:1:exon
so has part: feature:44214-44392:1:exon
so has part: feature:44607-44736:1:exon
so has part: feature:44974-45120:1:exon
so has part: feature:45526-45639:1:exon
so has part: feature:45852-46045:1:exon
so has part: feature:46253-46477:1:exon
so has part: feature:46639-46783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41545-41718:1:exon

position:41718:1
position: 41718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:41888-42018:1:exon

position:41888:1
position: 41888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42018:1
position: 42018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42325-42466:1:exon

position:42325:1
position: 42325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42466:1
position: 42466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43750-43923:1:exon

position:43750:1
position: 43750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43923:1
position: 43923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:44214-44392:1:exon

position:44214:1
position: 44214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44392:1
position: 44392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:44607-44736:1:exon

position:44607:1
position: 44607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44736:1
position: 44736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:44974-45120:1:exon

position:44974:1
position: 44974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45120:1
position: 45120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:45526-45639:1:exon

position:45526:1
position: 45526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45639:1
position: 45639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:45852-46045:1:exon

position:45852:1
position: 45852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46045:1
position: 46045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:46253-46477:1:exon

position:46253:1
position: 46253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46477:1
position: 46477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:46639-46783:1:exon

position:46639:1
position: 46639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101818805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101818805
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 45-like
translation: MAAATAGTGSRSLGAGGSSRGSHLPRRRQLHPPGFLSVLPKGTDTSSPIVTLQDVPKDLKGSPPSIGYKPKTTRIITNDLIRDLVIPQEKPQPCLIIGEKEYERIKESAQAPTDAERWDRLKTLKARQDAAFEALKKAQMEEQRKAELEDERDYRRHVEEEELQQEEQKLLQRAMRMRLEWEEEMQELNTLLFNAKCNMIWDKQVLEKRMIHKELVEEEKRLDKMLEMEREKGLEVQEELERCRKRELIRARQHIVKQMEQNAEERALRAEELYQEGQRQLERLEQMKREDRKAWEQKQQRLKQIHEEIKHFNVESQRLKDKQWEQERLEDERVLEHQRQKAEREAALEAEQEQLCLEKEKELARLRATQKQAQDWQAERDALKAKRNQEAADREWRRRETEKTQRKAEMQQQLRQDWLQQVAQKEQHLAMQMEQDRQEFQRVLRAHQEQLEQEKLQEEQRELRQRAHAEDVRRQIQELRQQRQRERAAGAEEGRQQEQEIRQRSQRLAQLRQQKLQEFRATGMPEKYCAQVERKA
SIO_010081: LOC101818805
subclass of: SO_0000673
so part of: LOC101818805
location: join(41596..41718,41888..42018,42325..42466,43750..43923,44214..44392,44607..44736,44974..45120,45526..45639,45852..46045,46253..46477,46639..46690)
location: region:41596-46690:1
so has part: feature:41596-41718:1:exon
so has part: feature:41888-42018:1:exon
so has part: feature:42325-42466:1:exon
so has part: feature:43750-43923:1:exon
so has part: feature:44214-44392:1:exon
so has part: feature:44607-44736:1:exon
so has part: feature:44974-45120:1:exon
so has part: feature:45526-45639:1:exon
so has part: feature:45852-46045:1:exon
so has part: feature:46253-46477:1:exon
so has part: feature:46639-46690:1:exon

XP_016158422.1
type: Protein
SIO_000068: ncbiprotein

position:41596:1
position: 41596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46690:1
position: 46690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41596-41718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41888-42018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42325-42466:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43750-43923:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:44214-44392:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44607-44736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44974-45120:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45526-45639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:45852-46045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46253-46477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:46639-46690:1:exon

BCL7B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BCL7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(53832..58971)
location: region:53832-58971:-1
so has part: feature:53832-58971:-1:exon
subclass of: SO_0000010

101819003
type: Gene
SIO_000068: ncbigene

position:53832:-1
position: 53832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58971:-1
position: 58971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53832-58971:-1:exon

BCL7B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BCL7B
product: B-cell CLL/lymphoma 7B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016302872.1
SIO_010081: BCL7B
subclass of: SO_0000673
so part of: BCL7B
location: complement(join(53832..54815,54934..55458,55852..55931,56123..56308,57327..57423,58138..58335,58957..58971))
location: region:53832-58971:-1
so has part: feature:58957-58971:-1:exon
so has part: feature:58138-58335:-1:exon
so has part: feature:57327-57423:-1:exon
so has part: feature:56123-56308:-1:exon
so has part: feature:55852-55931:-1:exon
so has part: feature:54934-55458:-1:exon
so has part: feature:53832-54815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58957-58971:-1:exon

position:58957:-1
position: 58957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58138-58335:-1:exon

position:58138:-1
position: 58138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58335:-1
position: 58335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57327-57423:-1:exon

position:57327:-1
position: 57327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57423:-1
position: 57423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:56123-56308:-1:exon

position:56123:-1
position: 56123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56308:-1
position: 56308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:55852-55931:-1:exon

position:55852:-1
position: 55852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55931:-1
position: 55931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:54934-55458:-1:exon

position:54934:-1
position: 54934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55458:-1
position: 55458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:53832-54815:-1:exon

position:54815:-1
position: 54815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCL7B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BCL7B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B-cell CLL/lymphoma 7 protein family member B
translation: MSGRSGRGAELTLLWANQSVAGWRGGGVSCRGAPGPVRPVSVLSCREKKWVTVGDTSLRIFKWVPVADSKEKEKSKSSSSTAREPNGFPANTSANSSLLLEFQGAVSADENSNQSSLSDVYQLKVDSSPNSSPSPQQSESMSPAHTSDFRTDDSQPPTLGQETLEDPSLPSSEVADEPPTLTKEEPVPLETQVTEEEEDSSAPPLKRFCADQNSVCHTALES
SIO_010081: BCL7B
subclass of: SO_0000673
so part of: BCL7B
location: complement(join(55366..55458,55852..55931,56123..56308,57327..57423,58138..58335,58957..58971))
location: region:55366-58971:-1
so has part: feature:58957-58971:-1:exon
so has part: feature:58138-58335:-1:exon
so has part: feature:57327-57423:-1:exon
so has part: feature:56123-56308:-1:exon
so has part: feature:55852-55931:-1:exon
so has part: feature:55366-55458:-1:exon

XP_016158358.1
type: Protein
SIO_000068: ncbiprotein

position:55366:-1
position: 55366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58957-58971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58138-58335:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57327-57423:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56123-56308:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55852-55931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55366-55458:-1:exon

TBL2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(59561..65385)
location: region:59561-65385:-1
so has part: feature:59561-65385:-1:exon
subclass of: SO_0000010

101811537
type: Gene
SIO_000068: ncbigene

position:59561:-1
position: 59561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65385:-1
position: 65385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59561-65385:-1:exon

TBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TBL2
product: transducin (beta)-like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005056357.1
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(59561..60110,61075..61227,61882..62008,63085..63236,63842..64026,64254..64378,65351..65385))
location: region:59561-65385:-1
so has part: feature:65351-65385:-1:exon
so has part: feature:64254-64378:-1:exon
so has part: feature:63842-64026:-1:exon
so has part: feature:63085-63236:-1:exon
so has part: feature:61882-62008:-1:exon
so has part: feature:61075-61227:-1:exon
so has part: feature:59561-60110:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65351-65385:-1:exon

position:65351:-1
position: 65351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64254-64378:-1:exon

position:64254:-1
position: 64254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64378:-1
position: 64378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63842-64026:-1:exon

position:63842:-1
position: 63842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64026:-1
position: 64026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63085-63236:-1:exon

position:63085:-1
position: 63085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63236:-1
position: 63236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:61882-62008:-1:exon

position:61882:-1
position: 61882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62008:-1
position: 62008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:61075-61227:-1:exon

position:61075:-1
position: 61075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61227:-1
position: 61227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:59561-60110:-1:exon

position:60110:-1
position: 60110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TBL2
product: transducin (beta)-like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005056356.2
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(59561..60110,61075..61227,61882..62008,63085..63236,63842..64026,64254..64378,64460..64732))
location: region:59561-64732:-1
so has part: feature:64460-64732:-1:exon
so has part: feature:64254-64378:-1:exon
so has part: feature:63842-64026:-1:exon
so has part: feature:63085-63236:-1:exon
so has part: feature:61882-62008:-1:exon
so has part: feature:61075-61227:-1:exon
so has part: feature:59561-60110:-1:exon

position:64732:-1
position: 64732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64460-64732:-1:exon

position:64460:-1
position: 64460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64254-64378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63842-64026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63085-63236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61882-62008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61075-61227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59561-60110:-1:exon

TBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin beta-like protein 2 isoform X2
translation: MRGTELAGPRANGHARPEQPRKAKPAARARREKPQQHSFAHRLLVAALKGHSSPVTCLDFSSNGKYLASCSEDRTVRLWSTRDLAGREHRCLRANVGLDHAEFVRLSPDSRAFIVWLANAETIRVYKMTKKEDGSFTFSATSGDFPKKHKAPVINIGIAETGKFIMTASSDTTILIWSPKGEVLASINTNQMNNAYATVSPCGRFVASCGFTPDVKVWEVCFSKNGDFREVTRAFELKGHTAGVQSFSFSNDSRRMATVSKDGTWKFWGTDVEYKKQQDPYLLLTGQCAVPEPCRIALSPDGRTVAVAGGTDIVVCNTRRGEEEERFLGVHSHRITDLAFDTTGRYVVSCGDRAIRVFHNTAGHRAVVEEMEAMLKKTGNKATRERLEQQISSALKALAAIYGKKH
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(59654..60110,61075..61227,61882..62008,63085..63236,63842..64026,64254..64378,65351..65372))
location: region:59654-65372:-1
so has part: feature:65351-65372:-1:exon
so has part: feature:64254-64378:-1:exon
so has part: feature:63842-64026:-1:exon
so has part: feature:63085-63236:-1:exon
so has part: feature:61882-62008:-1:exon
so has part: feature:61075-61227:-1:exon
so has part: feature:59654-60110:-1:exon

XP_005056414.1
type: Protein
SIO_000068: ncbiprotein

position:59654:-1
position: 59654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65372:-1
position: 65372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65351-65372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64254-64378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63842-64026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63085-63236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61882-62008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61075-61227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59654-60110:-1:exon

TBL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TBL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transducin beta-like protein 2 isoform X1
translation: MEVWAALGGSGLPGALIVLILVVLLAVALHRSAPWETPTAPQGGPRANGHARPEQPRKAKPAARARREKPQQHSFAHRLLVAALKGHSSPVTCLDFSSNGKYLASCSEDRTVRLWSTRDLAGREHRCLRANVGLDHAEFVRLSPDSRAFIVWLANAETIRVYKMTKKEDGSFTFSATSGDFPKKHKAPVINIGIAETGKFIMTASSDTTILIWSPKGEVLASINTNQMNNAYATVSPCGRFVASCGFTPDVKVWEVCFSKNGDFREVTRAFELKGHTAGVQSFSFSNDSRRMATVSKDGTWKFWGTDVEYKKQQDPYLLLTGQCAVPEPCRIALSPDGRTVAVAGGTDIVVCNTRRGEEEERFLGVHSHRITDLAFDTTGRYVVSCGDRAIRVFHNTAGHRAVVEEMEAMLKKTGNKATRERLEQQISSALKALAAIYGKKH
SIO_010081: TBL2
subclass of: SO_0000673
so part of: TBL2
location: complement(join(59654..60110,61075..61227,61882..62008,63085..63236,63842..64026,64254..64378,64460..64589))
location: region:59654-64589:-1
so has part: feature:64460-64589:-1:exon
so has part: feature:64254-64378:-1:exon
so has part: feature:63842-64026:-1:exon
so has part: feature:63085-63236:-1:exon
so has part: feature:61882-62008:-1:exon
so has part: feature:61075-61227:-1:exon
so has part: feature:59654-60110:-1:exon

XP_005056413.1
type: Protein
SIO_000068: ncbiprotein

position:64589:-1
position: 64589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64460-64589:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64254-64378:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:63842-64026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:63085-63236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61882-62008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:61075-61227:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:59654-60110:-1:exon

MLXIPL
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(65465..83360)
location: region:65465-83360:-1
so has part: feature:65465-83360:-1:exon
subclass of: SO_0000010

101819188
type: Gene
SIO_000068: ncbigene

position:65465:-1
position: 65465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83360:-1
position: 83360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65465-83360:-1:exon

MLXIPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MLXIPL
product: MLX interacting protein like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016303113.1
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(65465..65737,66108..66237,67331..67454,67756..67883,68087..68206,68355..68467,69114..69288,69668..69741,70267..70861,70944..71116,74772..74849,75494..75692,75949..75993,76190..76279,76470..76552,76694..76800,82869..83360))
location: region:65465-83360:-1
so has part: feature:82869-83360:-1:exon
so has part: feature:76694-76800:-1:exon
so has part: feature:76470-76552:-1:exon
so has part: feature:76190-76279:-1:exon
so has part: feature:75949-75993:-1:exon
so has part: feature:75494-75692:-1:exon
so has part: feature:74772-74849:-1:exon
so has part: feature:70944-71116:-1:exon
so has part: feature:70267-70861:-1:exon
so has part: feature:69668-69741:-1:exon
so has part: feature:69114-69288:-1:exon
so has part: feature:68355-68467:-1:exon
so has part: feature:68087-68206:-1:exon
so has part: feature:67756-67883:-1:exon
so has part: feature:67331-67454:-1:exon
so has part: feature:66108-66237:-1:exon
so has part: feature:65465-65737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82869-83360:-1:exon

position:82869:-1
position: 82869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:76694-76800:-1:exon

position:76694:-1
position: 76694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76800:-1
position: 76800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:76470-76552:-1:exon

position:76470:-1
position: 76470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76552:-1
position: 76552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:76190-76279:-1:exon

position:76190:-1
position: 76190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76279:-1
position: 76279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:75949-75993:-1:exon

position:75949:-1
position: 75949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75993:-1
position: 75993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:75494-75692:-1:exon

position:75494:-1
position: 75494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75692:-1
position: 75692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:74772-74849:-1:exon

position:74772:-1
position: 74772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74849:-1
position: 74849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:70944-71116:-1:exon

position:70944:-1
position: 70944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71116:-1
position: 71116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:70267-70861:-1:exon

position:70267:-1
position: 70267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70861:-1
position: 70861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:69668-69741:-1:exon

position:69668:-1
position: 69668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69741:-1
position: 69741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:69114-69288:-1:exon

position:69114:-1
position: 69114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69288:-1
position: 69288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:68355-68467:-1:exon

position:68355:-1
position: 68355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68467:-1
position: 68467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:68087-68206:-1:exon

position:68087:-1
position: 68087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68206:-1
position: 68206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:67756-67883:-1:exon

position:67756:-1
position: 67756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67883:-1
position: 67883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:67331-67454:-1:exon

position:67331:-1
position: 67331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67454:-1
position: 67454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:66108-66237:-1:exon

position:66108:-1
position: 66108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66237:-1
position: 66237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:65465-65737:-1:exon

position:65737:-1
position: 65737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MLXIPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MLXIPL
product: MLX interacting protein like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303112.1
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(65465..65737,66108..66237,67331..67454,67756..67883,68087..68206,68355..68467,69114..69285,69668..69741,70267..70861,70944..71116,72807..72902,74772..74849,75494..75692,75949..75993,76190..76279,76470..76552,76694..76800,82869..83360))
location: region:65465-83360:-1
so has part: feature:82869-83360:-1:exon
so has part: feature:76694-76800:-1:exon
so has part: feature:76470-76552:-1:exon
so has part: feature:76190-76279:-1:exon
so has part: feature:75949-75993:-1:exon
so has part: feature:75494-75692:-1:exon
so has part: feature:74772-74849:-1:exon
so has part: feature:72807-72902:-1:exon
so has part: feature:70944-71116:-1:exon
so has part: feature:70267-70861:-1:exon
so has part: feature:69668-69741:-1:exon
so has part: feature:69114-69285:-1:exon
so has part: feature:68355-68467:-1:exon
so has part: feature:68087-68206:-1:exon
so has part: feature:67756-67883:-1:exon
so has part: feature:67331-67454:-1:exon
so has part: feature:66108-66237:-1:exon
so has part: feature:65465-65737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82869-83360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76694-76800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76470-76552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76190-76279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75949-75993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75494-75692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74772-74849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72807-72902:-1:exon

position:72807:-1
position: 72807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72902:-1
position: 72902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:70944-71116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70267-70861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69668-69741:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69114-69285:-1:exon

position:69285:-1
position: 69285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:68355-68467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68087-68206:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67756-67883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67331-67454:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66108-66237:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65465-65737:-1:exon

MLXIPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MLXIPL
product: MLX interacting protein like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303111.1
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(65465..65737,66108..66237,67331..67454,67756..67883,68087..68206,68355..68467,69114..69288,69668..69741,70267..70861,70944..71116,72807..72902,74772..74849,75494..75692,75949..75993,76190..76279,76470..76552,76694..76800,82869..83360))
location: region:65465-83360:-1
so has part: feature:82869-83360:-1:exon
so has part: feature:76694-76800:-1:exon
so has part: feature:76470-76552:-1:exon
so has part: feature:76190-76279:-1:exon
so has part: feature:75949-75993:-1:exon
so has part: feature:75494-75692:-1:exon
so has part: feature:74772-74849:-1:exon
so has part: feature:72807-72902:-1:exon
so has part: feature:70944-71116:-1:exon
so has part: feature:70267-70861:-1:exon
so has part: feature:69668-69741:-1:exon
so has part: feature:69114-69288:-1:exon
so has part: feature:68355-68467:-1:exon
so has part: feature:68087-68206:-1:exon
so has part: feature:67756-67883:-1:exon
so has part: feature:67331-67454:-1:exon
so has part: feature:66108-66237:-1:exon
so has part: feature:65465-65737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82869-83360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76694-76800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76470-76552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76190-76279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75949-75993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75494-75692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74772-74849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72807-72902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70944-71116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70267-70861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69668-69741:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69114-69288:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68355-68467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68087-68206:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67756-67883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67331-67454:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66108-66237:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65465-65737:-1:exon

MLXIPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate-responsive element-binding protein isoform X3
translation: MAGAQVGLPGPFLEPPVRPCPVSDSDSEDTAAGGTGPSAAAQNSSQVIHSGHFMVSCPHSDSLPRRRHHHAKPEPADPWSIDPTLTRLFECMSLEYSGKLVSPKWKNFKGLQLLCWDKIRLNNVIWRAWYIQYVERRKNPVCGFITPLEGMEADEHRKPEAVVLEGNYWKRRIEVVMREYHKWRIYYKKRLRKSTRDGEISSPKTDEDAWRPTEKWCNQLFCNVVPMLLGDEEEEHGSRQHFDLDTFLSDISDTLFTMTQMPSTHQALPEDAYVGNADMIQPDLAPLQPSLDDMDISEIFTSHRAPPSQIQLGYQDSSCFSPMAEPLFSSGESLMGARGLPVSPDAPLLPGAPLQPSGASQLSFHSTFPGSELPLAPLPPDPPDVAPSSLSPQLRHKPTLQYDFPGKCLSLEPPAPHYVPPIPSPRAPLLSLEPPFSPASVPHFKFPCSSSPDPSLVTHPASPLSSPCFAPYVPGLGYATGMGPQGYPSPAASQLLPPTLMGNPRFAPRKGLPQGGGGRPKAKPSGTKARRLQGHALSHLPAPNPCPSQLLTTAKQDLVLDTPCPMGAGLVPTAPGSPQQSTVPKVPATFLSRIAQMSPGLAPGSSPSQVLSHTVSMQPDPLQVPKAEQLSPTSACGSDWPKPSQASPGPTARLGTSISPHQTMSRPGRPESSKLESRRITHISAEQKRRFNIKLGFTTLHSLVSTLSAQPSIKVSKATTLQKTAEYICKLQQERAALQDEALRLREQIEELNGSINLCQEQLPATGVPITRQRFDNMRRMFDEYVCSSTLQNWKFWIFSIIIRPLFESFNDMVSTASMESLTQTSLAWLDQHCSLPALRPTVLSSLRQLSISTSILSDPARVPEQAARAVAALGRPGASSST
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(65610..65737,66108..66237,67331..67454,67756..67883,68087..68206,68355..68467,69114..69288,69668..69741,70267..70861,70944..71116,74772..74849,75494..75692,75949..75993,76190..76279,76470..76552,76694..76800,82869..83158))
location: region:65610-83158:-1
so has part: feature:82869-83158:-1:exon
so has part: feature:76694-76800:-1:exon
so has part: feature:76470-76552:-1:exon
so has part: feature:76190-76279:-1:exon
so has part: feature:75949-75993:-1:exon
so has part: feature:75494-75692:-1:exon
so has part: feature:74772-74849:-1:exon
so has part: feature:70944-71116:-1:exon
so has part: feature:70267-70861:-1:exon
so has part: feature:69668-69741:-1:exon
so has part: feature:69114-69288:-1:exon
so has part: feature:68355-68467:-1:exon
so has part: feature:68087-68206:-1:exon
so has part: feature:67756-67883:-1:exon
so has part: feature:67331-67454:-1:exon
so has part: feature:66108-66237:-1:exon
so has part: feature:65610-65737:-1:exon

XP_016158599.1
type: Protein
SIO_000068: ncbiprotein

position:65610:-1
position: 65610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83158:-1
position: 83158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82869-83158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76694-76800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76470-76552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76190-76279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75949-75993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75494-75692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74772-74849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70944-71116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70267-70861:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69668-69741:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69114-69288:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:68355-68467:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68087-68206:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:67756-67883:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67331-67454:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:66108-66237:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:65610-65737:-1:exon

MLXIPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate-responsive element-binding protein isoform X2
translation: MAGAQVGLPGPFLEPPVRPCPVSDSDSEDTAAGGTGPSAAAQNSSQVIHSGHFMVSCPHSDSLPRRRHHHAKPEPADPWSIDPTLTRLFECMSLEYSGKLVSPKWKNFKGLQLLCWDKIRLNNVIWRAWYIQYVERRKNPVCGFITPLEGMEADEHRKPEAVVLEGNYWKRRIEVVMREYHKWRIYYKKRLRKSTRDGEISSPKTDEDAWRPTEKWCNQLFCNVVPMLLGDEEEEHGSRQHFDLDTFLSDISDTLFTMTQMPSTHQALPEDAYVGNADMIQPDLAPLQPSLDDMDISAGAGLRCEADGEVLTAKAREQSGPVPCWHPAPEIFTSHRAPPSQIQLGYQDSSCFSPMAEPLFSSGESLMGARGLPVSPDAPLLPGAPLQPSGASQLSFHSTFPGSELPLAPLPPDPPDVAPSSLSPQLRHKPTLQYDFPGKCLSLEPPAPHYVPPIPSPRAPLLSLEPPFSPASVPHFKFPCSSSPDPSLVTHPASPLSSPCFAPYVPGLGYATGMGPQGYPSPAASQLLPPTLMGNPRFAPRKGLPQGGGGRPKAKPSGTKARRLQGHALSHLPAPNPCPSQLLTTAKQDLVLDTPCPMGAGLVPTAPGSPQSTVPKVPATFLSRIAQMSPGLAPGSSPSQVLSHTVSMQPDPLQVPKAEQLSPTSACGSDWPKPSQASPGPTARLGTSISPHQTMSRPGRPESSKLESRRITHISAEQKRRFNIKLGFTTLHSLVSTLSAQPSIKVSKATTLQKTAEYICKLQQERAALQDEALRLREQIEELNGSINLCQEQLPATGVPITRQRFDNMRRMFDEYVCSSTLQNWKFWIFSIIIRPLFESFNDMVSTASMESLTQTSLAWLDQHCSLPALRPTVLSSLRQLSISTSILSDPARVPEQAARAVAALGRPGASSST
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(65610..65737,66108..66237,67331..67454,67756..67883,68087..68206,68355..68467,69114..69285,69668..69741,70267..70861,70944..71116,72807..72902,74772..74849,75494..75692,75949..75993,76190..76279,76470..76552,76694..76800,82869..83158))
location: region:65610-83158:-1
so has part: feature:82869-83158:-1:exon
so has part: feature:76694-76800:-1:exon
so has part: feature:76470-76552:-1:exon
so has part: feature:76190-76279:-1:exon
so has part: feature:75949-75993:-1:exon
so has part: feature:75494-75692:-1:exon
so has part: feature:74772-74849:-1:exon
so has part: feature:72807-72902:-1:exon
so has part: feature:70944-71116:-1:exon
so has part: feature:70267-70861:-1:exon
so has part: feature:69668-69741:-1:exon
so has part: feature:69114-69285:-1:exon
so has part: feature:68355-68467:-1:exon
so has part: feature:68087-68206:-1:exon
so has part: feature:67756-67883:-1:exon
so has part: feature:67331-67454:-1:exon
so has part: feature:66108-66237:-1:exon
so has part: feature:65610-65737:-1:exon

XP_016158598.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82869-83158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76694-76800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76470-76552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76190-76279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75949-75993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75494-75692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74772-74849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72807-72902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70944-71116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70267-70861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69668-69741:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69114-69285:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68355-68467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68087-68206:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67756-67883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67331-67454:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66108-66237:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65610-65737:-1:exon

MLXIPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MLXIPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate-responsive element-binding protein isoform X1
translation: MAGAQVGLPGPFLEPPVRPCPVSDSDSEDTAAGGTGPSAAAQNSSQVIHSGHFMVSCPHSDSLPRRRHHHAKPEPADPWSIDPTLTRLFECMSLEYSGKLVSPKWKNFKGLQLLCWDKIRLNNVIWRAWYIQYVERRKNPVCGFITPLEGMEADEHRKPEAVVLEGNYWKRRIEVVMREYHKWRIYYKKRLRKSTRDGEISSPKTDEDAWRPTEKWCNQLFCNVVPMLLGDEEEEHGSRQHFDLDTFLSDISDTLFTMTQMPSTHQALPEDAYVGNADMIQPDLAPLQPSLDDMDISAGAGLRCEADGEVLTAKAREQSGPVPCWHPAPEIFTSHRAPPSQIQLGYQDSSCFSPMAEPLFSSGESLMGARGLPVSPDAPLLPGAPLQPSGASQLSFHSTFPGSELPLAPLPPDPPDVAPSSLSPQLRHKPTLQYDFPGKCLSLEPPAPHYVPPIPSPRAPLLSLEPPFSPASVPHFKFPCSSSPDPSLVTHPASPLSSPCFAPYVPGLGYATGMGPQGYPSPAASQLLPPTLMGNPRFAPRKGLPQGGGGRPKAKPSGTKARRLQGHALSHLPAPNPCPSQLLTTAKQDLVLDTPCPMGAGLVPTAPGSPQQSTVPKVPATFLSRIAQMSPGLAPGSSPSQVLSHTVSMQPDPLQVPKAEQLSPTSACGSDWPKPSQASPGPTARLGTSISPHQTMSRPGRPESSKLESRRITHISAEQKRRFNIKLGFTTLHSLVSTLSAQPSIKVSKATTLQKTAEYICKLQQERAALQDEALRLREQIEELNGSINLCQEQLPATGVPITRQRFDNMRRMFDEYVCSSTLQNWKFWIFSIIIRPLFESFNDMVSTASMESLTQTSLAWLDQHCSLPALRPTVLSSLRQLSISTSILSDPARVPEQAARAVAALGRPGASSST
SIO_010081: MLXIPL
subclass of: SO_0000673
so part of: MLXIPL
location: complement(join(65610..65737,66108..66237,67331..67454,67756..67883,68087..68206,68355..68467,69114..69288,69668..69741,70267..70861,70944..71116,72807..72902,74772..74849,75494..75692,75949..75993,76190..76279,76470..76552,76694..76800,82869..83158))
location: region:65610-83158:-1
so has part: feature:82869-83158:-1:exon
so has part: feature:76694-76800:-1:exon
so has part: feature:76470-76552:-1:exon
so has part: feature:76190-76279:-1:exon
so has part: feature:75949-75993:-1:exon
so has part: feature:75494-75692:-1:exon
so has part: feature:74772-74849:-1:exon
so has part: feature:72807-72902:-1:exon
so has part: feature:70944-71116:-1:exon
so has part: feature:70267-70861:-1:exon
so has part: feature:69668-69741:-1:exon
so has part: feature:69114-69288:-1:exon
so has part: feature:68355-68467:-1:exon
so has part: feature:68087-68206:-1:exon
so has part: feature:67756-67883:-1:exon
so has part: feature:67331-67454:-1:exon
so has part: feature:66108-66237:-1:exon
so has part: feature:65610-65737:-1:exon

XP_016158597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82869-83158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76694-76800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76470-76552:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76190-76279:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:75949-75993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:75494-75692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:74772-74849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72807-72902:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70944-71116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70267-70861:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:69668-69741:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69114-69288:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:68355-68467:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:68087-68206:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:67756-67883:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:67331-67454:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:66108-66237:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:65610-65737:-1:exon

LOC101811994
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101811994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(89949..100621)
location: region:89949-100621:-1
so has part: feature:89949-100621:-1:exon
subclass of: SO_0000010

101811994
type: Gene
SIO_000068: ncbigene

position:89949:-1
position: 89949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:100621:-1
position: 100621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89949-100621:-1:exon

LOC101811994
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811994
product: fibrinogen-like protein 1-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005056359.2
SIO_010081: LOC101811994
subclass of: SO_0000673
so part of: LOC101811994
location: complement(join(89949..90787,91383..91448,92510..92653,94028..94392,100295..100621))
location: region:89949-100621:-1
so has part: feature:100295-100621:-1:exon
so has part: feature:94028-94392:-1:exon
so has part: feature:92510-92653:-1:exon
so has part: feature:91383-91448:-1:exon
so has part: feature:89949-90787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100295-100621:-1:exon

position:100295:-1
position: 100295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94028-94392:-1:exon

position:94028:-1
position: 94028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94392:-1
position: 94392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:92510-92653:-1:exon

position:92510:-1
position: 92510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92653:-1
position: 92653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:91383-91448:-1:exon

position:91383:-1
position: 91383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91448:-1
position: 91448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89949-90787:-1:exon

position:90787:-1
position: 90787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101811994
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen-like protein 1-like protein
translation: MAAHHYSPLFFTSVLALLSPLLALHIENLERLKVNLDEIINIPSDRPLPDEAGGITQQNWAADPQQEQGRSGWPKDCSELPASSPSGIYIIQPTGEQTIVVYCEMSRDDGGWTVIQRNHRDTPVSWDDSWSTYKHGFGNVHTEFWLGTEYIHQITRQKVYQVRFVIWDAANNMKFADYNLFSVDDESQGYQLRLGAHSGTAEDAMASKGTTTMHDNMKFSAKDRDQDTSSGNCATSSGGGWWYSACYSVRLNFKGAMTWGNLCQGSCRASAILIKPTTYC
SIO_010081: LOC101811994
subclass of: SO_0000673
so part of: LOC101811994
location: complement(join(90159..90787,91383..91448,92510..92653,94028..94031))
location: region:90159-94031:-1
so has part: feature:94028-94031:-1:exon
so has part: feature:92510-92653:-1:exon
so has part: feature:91383-91448:-1:exon
so has part: feature:90159-90787:-1:exon

XP_005056416.1
type: Protein
SIO_000068: ncbiprotein

position:90159:-1
position: 90159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94031:-1
position: 94031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94028-94031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92510-92653:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:91383-91448:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90159-90787:-1:exon

BAZ1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BAZ1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 107028..151859
location: region:107028-151859:1
so has part: feature:107028-151859:1:exon
subclass of: SO_0000010

101812193
type: Gene
SIO_000068: ncbigene

position:107028:1
position: 107028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151859:1
position: 151859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107028-151859:1:exon

BAZ1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BAZ1B
product: bromodomain adjacent to zinc finger domain 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005056360.1
SIO_010081: BAZ1B
subclass of: SO_0000673
so part of: BAZ1B
location: join(107028..107205,114049..114165,116256..116400,117218..117416,120870..120991,121788..121985,123109..124804,125720..125858,126326..126456,127785..127896,134361..134459,134868..135045,135482..135667,139849..139996,141512..141659,144311..144429,146427..146575,149239..149342,149811..151859)
location: region:107028-151859:1
so has part: feature:107028-107205:1:exon
so has part: feature:114049-114165:1:exon
so has part: feature:116256-116400:1:exon
so has part: feature:117218-117416:1:exon
so has part: feature:120870-120991:1:exon
so has part: feature:121788-121985:1:exon
so has part: feature:123109-124804:1:exon
so has part: feature:125720-125858:1:exon
so has part: feature:126326-126456:1:exon
so has part: feature:127785-127896:1:exon
so has part: feature:134361-134459:1:exon
so has part: feature:134868-135045:1:exon
so has part: feature:135482-135667:1:exon
so has part: feature:139849-139996:1:exon
so has part: feature:141512-141659:1:exon
so has part: feature:144311-144429:1:exon
so has part: feature:146427-146575:1:exon
so has part: feature:149239-149342:1:exon
so has part: feature:149811-151859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107028-107205:1:exon

position:107205:1
position: 107205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114049-114165:1:exon

position:114049:1
position: 114049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114165:1
position: 114165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116256-116400:1:exon

position:116256:1
position: 116256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116400:1
position: 116400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:117218-117416:1:exon

position:117218:1
position: 117218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117416:1
position: 117416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:120870-120991:1:exon

position:120870:1
position: 120870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120991:1
position: 120991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:121788-121985:1:exon

position:121788:1
position: 121788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121985:1
position: 121985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:123109-124804:1:exon

position:123109:1
position: 123109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124804:1
position: 124804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125720-125858:1:exon

position:125720:1
position: 125720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125858:1
position: 125858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:126326-126456:1:exon

position:126326:1
position: 126326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126456:1
position: 126456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:127785-127896:1:exon

position:127785:1
position: 127785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127896:1
position: 127896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:134361-134459:1:exon

position:134361:1
position: 134361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134459:1
position: 134459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:134868-135045:1:exon

position:134868:1
position: 134868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135045:1
position: 135045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:135482-135667:1:exon

position:135482:1
position: 135482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135667:1
position: 135667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:139849-139996:1:exon

position:139849:1
position: 139849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139996:1
position: 139996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:141512-141659:1:exon

position:141512:1
position: 141512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141659:1
position: 141659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:144311-144429:1:exon

position:144311:1
position: 144311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144429:1
position: 144429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:146427-146575:1:exon

position:146427:1
position: 146427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146575:1
position: 146575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:149239-149342:1:exon

position:149239:1
position: 149239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149342:1
position: 149342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:149811-151859:1:exon

position:149811:1
position: 149811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BAZ1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BAZ1B
product: bromodomain adjacent to zinc finger domain 1B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005056361.1
SIO_010081: BAZ1B
subclass of: SO_0000673
so part of: BAZ1B
location: join(107028..107205,114049..114165,116256..116400,117218..117410,120870..120991,121788..121985,123109..124804,125720..125858,126326..126456,127785..127896,134361..134459,134868..135045,135482..135667,139849..139996,141512..141659,144311..144429,146427..146575,149239..149342,149811..151859)
location: region:107028-151859:1
so has part: feature:107028-107205:1:exon
so has part: feature:114049-114165:1:exon
so has part: feature:116256-116400:1:exon
so has part: feature:117218-117410:1:exon
so has part: feature:120870-120991:1:exon
so has part: feature:121788-121985:1:exon
so has part: feature:123109-124804:1:exon
so has part: feature:125720-125858:1:exon
so has part: feature:126326-126456:1:exon
so has part: feature:127785-127896:1:exon
so has part: feature:134361-134459:1:exon
so has part: feature:134868-135045:1:exon
so has part: feature:135482-135667:1:exon
so has part: feature:139849-139996:1:exon
so has part: feature:141512-141659:1:exon
so has part: feature:144311-144429:1:exon
so has part: feature:146427-146575:1:exon
so has part: feature:149239-149342:1:exon
so has part: feature:149811-151859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:107028-107205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114049-114165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116256-116400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117218-117410:1:exon

position:117410:1
position: 117410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:120870-120991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121788-121985:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123109-124804:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125720-125858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126326-126456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127785-127896:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134361-134459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:134868-135045:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:135482-135667:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:139849-139996:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:141512-141659:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144311-144429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:146427-146575:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149239-149342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:149811-151859:1:exon

BAZ1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BAZ1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase BAZ1B isoform X1
translation: MAPLLGRKPFPLAKPLPPGEPGERFVIPHTQEAFRTREEYEARLERYSERIWTCKSTGSSQLTHKEAWEEEQEVAELLKEEFPIWYEKLVLEIVHHNTVSLEKLVDAAWLEIMTKFAVGEECDFEVGKEKMLPVKVVKIHPLDKVDEEASEKKSDGACHSPSSDKENSSQAAQDNQKEAMLKEDDNRRDGMNDRARRSPRKLPTSLKKEERKWVPPKFLPHKYDVKLKNEDKIISNVPADSLVRTERPPNKEILRYFIRHNALRAGTCENAPWVVEDELVKKYSLPSKFSDFLLDPHKYMALNPSTKRKSSRSPDRKLPKKSKADGSSLGQPLSPTLWCHVHLEKSIIGSPLKVKNSKNSKCPKEELEEVMKIVSPAKLASNFHIPKRGRLGKGNNKSLDKKQRGKRVLNGQKSSGKAKSPRKGLKTPKMKMKQMTLLDMAKGTTKVSRAPRSSSGTPGSSRKPQKHLPPAALHLIAYYKENKDREDKKSALSCIISKTARLLSSEDRARLPEDLRGLVQKRYELLEHRKRWATMTEEQRKEYMKKKREKLKEKLKERAKERKEKEMKEKLEKQRRFEDQDLKGKVLPTFKLVDTPEGLPNTLFGDVAMVVEFLSCYSGLLMPDAQYPITAVSLMEALCAEKGGFLYLNRVLVILLQTLLQDEIAEDYAELGMKLSEIPLTLHSASELVRLCLRKSDVQEESEVSDNIDESKDSATFEDNEVQDEFLEKLETSEFFELTPEEKLRILGALCHRILMTYSVQDHVEAKQQASAELWKERLAVLKEENDKKRAEKQKRKEMVAKTKESGKEEHMMGRNEKKKHEMMKIEHRVEIEADDMISAVKSRRLLAIQAKKEREQQEIQMRVRMEKEAEEERIRRHKAAAEKTFQDGIAKAKLVMRRTPVGTDRNHNRYWLFSDEVPGLFIEKGWVHDSIDYRFTLPHQKKEDLKKDYSPGEKRKSTGSDGRGNKLHRSVPATDLPPETTTPKQGQNLWFLCDSQKDLDELLDCLHPQGVRESQLKERLEKRYQDITHSIHLARKQNLGLKSCDGNQELLNYLRSDLIEVATRLQKGGLGYVDVTPEYEAKVYSLESLKDFGECVIALQAGVVKKFLQGFMAPKQKRRKHQGEDYIAKAEEIDEDKKMAEEAKVASAVEKWKTAIREAQTFSRMHVLLGMLDACIKWDMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEIPDGEWQCPACQPSTARRSSRGRNYAEDSAEDEGEESEEASDEPDAEEEEEEEDDYEVAGLKLRPRKAARGKQSSMYSSRQGRHQRKKQTLHPARGSRQRTAPVNGADIDELVLQTKRTARRQNLELQKCEEILSKLIKYRFSWPFREPVTTEEAEDYFEVISNPMDFQTMQSKCSCGNYRSVQEFLSDMKQVFSNAERYNQNGSHVLSCLEKTEQCLIDMVHKHLPGHTYARRKRKQLSARCQGLEEQEGDSESEPLDHSRGRKRKK
SIO_010081: BAZ1B
subclass of: SO_0000673
so part of: BAZ1B
location: join(107093..107205,114049..114165,116256..116400,117218..117416,120870..120991,121788..121985,123109..124804,125720..125858,126326..126456,127785..127896,134361..134459,134868..135045,135482..135667,139849..139996,141512..141659,144311..144429,146427..146575,149239..149342,149811..150177)
location: region:107093-150177:1
so has part: feature:107093-107205:1:exon
so has part: feature:114049-114165:1:exon
so has part: feature:116256-116400:1:exon
so has part: feature:117218-117416:1:exon
so has part: feature:120870-120991:1:exon
so has part: feature:121788-121985:1:exon
so has part: feature:123109-124804:1:exon
so has part: feature:125720-125858:1:exon
so has part: feature:126326-126456:1:exon
so has part: feature:127785-127896:1:exon
so has part: feature:134361-134459:1:exon
so has part: feature:134868-135045:1:exon
so has part: feature:135482-135667:1:exon
so has part: feature:139849-139996:1:exon
so has part: feature:141512-141659:1:exon
so has part: feature:144311-144429:1:exon
so has part: feature:146427-146575:1:exon
so has part: feature:149239-149342:1:exon
so has part: feature:149811-150177:1:exon

XP_005056417.1
type: Protein
SIO_000068: ncbiprotein

position:107093:1
position: 107093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150177:1
position: 150177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107093-107205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114049-114165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116256-116400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117218-117416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120870-120991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121788-121985:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123109-124804:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125720-125858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126326-126456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127785-127896:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134361-134459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:134868-135045:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:135482-135667:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:139849-139996:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:141512-141659:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144311-144429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:146427-146575:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149239-149342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:149811-150177:1:exon

BAZ1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BAZ1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase BAZ1B isoform X2
translation: MAPLLGRKPFPLAKPLPPGEPGERFVIPHTQEAFRTREEYEARLERYSERIWTCKSTGSSQLTHKEAWEEEQEVAELLKEEFPIWYEKLVLEIVHHNTVSLEKLVDAAWLEIMTKFAVGEECDFEVGKEKMLPVKVVKIHPLDKVDEEASEKKSDGACHSPSSDKENSSQAAQDNQKEAMLKEDDNRRDDDRARRSPRKLPTSLKKEERKWVPPKFLPHKYDVKLKNEDKIISNVPADSLVRTERPPNKEILRYFIRHNALRAGTCENAPWVVEDELVKKYSLPSKFSDFLLDPHKYMALNPSTKRKSSRSPDRKLPKKSKADGSSLGQPLSPTLWCHVHLEKSIIGSPLKVKNSKNSKCPKEELEEVMKIVSPAKLASNFHIPKRGRLGKGNNKSLDKKQRGKRVLNGQKSSGKAKSPRKGLKTPKMKMKQMTLLDMAKGTTKVSRAPRSSSGTPGSSRKPQKHLPPAALHLIAYYKENKDREDKKSALSCIISKTARLLSSEDRARLPEDLRGLVQKRYELLEHRKRWATMTEEQRKEYMKKKREKLKEKLKERAKERKEKEMKEKLEKQRRFEDQDLKGKVLPTFKLVDTPEGLPNTLFGDVAMVVEFLSCYSGLLMPDAQYPITAVSLMEALCAEKGGFLYLNRVLVILLQTLLQDEIAEDYAELGMKLSEIPLTLHSASELVRLCLRKSDVQEESEVSDNIDESKDSATFEDNEVQDEFLEKLETSEFFELTPEEKLRILGALCHRILMTYSVQDHVEAKQQASAELWKERLAVLKEENDKKRAEKQKRKEMVAKTKESGKEEHMMGRNEKKKHEMMKIEHRVEIEADDMISAVKSRRLLAIQAKKEREQQEIQMRVRMEKEAEEERIRRHKAAAEKTFQDGIAKAKLVMRRTPVGTDRNHNRYWLFSDEVPGLFIEKGWVHDSIDYRFTLPHQKKEDLKKDYSPGEKRKSTGSDGRGNKLHRSVPATDLPPETTTPKQGQNLWFLCDSQKDLDELLDCLHPQGVRESQLKERLEKRYQDITHSIHLARKQNLGLKSCDGNQELLNYLRSDLIEVATRLQKGGLGYVDVTPEYEAKVYSLESLKDFGECVIALQAGVVKKFLQGFMAPKQKRRKHQGEDYIAKAEEIDEDKKMAEEAKVASAVEKWKTAIREAQTFSRMHVLLGMLDACIKWDMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEIPDGEWQCPACQPSTARRSSRGRNYAEDSAEDEGEESEEASDEPDAEEEEEEEDDYEVAGLKLRPRKAARGKQSSMYSSRQGRHQRKKQTLHPARGSRQRTAPVNGADIDELVLQTKRTARRQNLELQKCEEILSKLIKYRFSWPFREPVTTEEAEDYFEVISNPMDFQTMQSKCSCGNYRSVQEFLSDMKQVFSNAERYNQNGSHVLSCLEKTEQCLIDMVHKHLPGHTYARRKRKQLSARCQGLEEQEGDSESEPLDHSRGRKRKK
SIO_010081: BAZ1B
subclass of: SO_0000673
so part of: BAZ1B
location: join(107093..107205,114049..114165,116256..116400,117218..117410,120870..120991,121788..121985,123109..124804,125720..125858,126326..126456,127785..127896,134361..134459,134868..135045,135482..135667,139849..139996,141512..141659,144311..144429,146427..146575,149239..149342,149811..150177)
location: region:107093-150177:1
so has part: feature:107093-107205:1:exon
so has part: feature:114049-114165:1:exon
so has part: feature:116256-116400:1:exon
so has part: feature:117218-117410:1:exon
so has part: feature:120870-120991:1:exon
so has part: feature:121788-121985:1:exon
so has part: feature:123109-124804:1:exon
so has part: feature:125720-125858:1:exon
so has part: feature:126326-126456:1:exon
so has part: feature:127785-127896:1:exon
so has part: feature:134361-134459:1:exon
so has part: feature:134868-135045:1:exon
so has part: feature:135482-135667:1:exon
so has part: feature:139849-139996:1:exon
so has part: feature:141512-141659:1:exon
so has part: feature:144311-144429:1:exon
so has part: feature:146427-146575:1:exon
so has part: feature:149239-149342:1:exon
so has part: feature:149811-150177:1:exon

XP_005056418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107093-107205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114049-114165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116256-116400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117218-117410:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120870-120991:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:121788-121985:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:123109-124804:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125720-125858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126326-126456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:127785-127896:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:134361-134459:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:134868-135045:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:135482-135667:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:139849-139996:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:141512-141659:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:144311-144429:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:146427-146575:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149239-149342:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:149811-150177:1:exon

FZD9
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FZD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155464..157513)
location: region:155464-157513:-1
so has part: feature:155464-157513:-1:exon
subclass of: SO_0000010

101819389
type: Gene
SIO_000068: ncbigene

position:155464:-1
position: 155464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157513:-1
position: 157513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155464-157513:-1:exon

FZD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FZD9
product: frizzled class receptor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056399.2
SIO_010081: FZD9
subclass of: SO_0000673
so part of: FZD9
location: complement(155464..157513)
location: region:155464-157513:-1
so has part: feature:155464-157513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:155464-157513:-1:exon

FZD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FZD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: frizzled-9
translation: MCRGIGYNLTRMPNLLGHESQREAALKLHEFAPLVEYGCHVHLRFFLCSLYAPMCTDQVSASIPACRPMCEQARHKCVPIMEQFNFGWPESLDCGRLPTKNDPNALCMEAPENASAAEPHKGQGMLPVAPRPWPPGTTTEGRGPNGVGACDNPEKFQYVEKSLSCAPKCSPGVDVYWSREDKDFAFIWMAVWSTLCFVSTAFTVLTFLLDPHRFQYPERPIIFLSMCYNVYSVAFIIRSVAGAENIACDRENGELYIIQEGLESTGCTIVFLILYYFGMASSLWWVVLTLTWFLAAGKKWGHEAIEAHSSYFHMAAWGIPAMKTIVILTMRKVAGDELTGLCYVGSMDISALTGFVLIPLSCYLVIGTSFILTGFVALFHIRKIMKTGGTNTEKLEKLMVKIGVFSILYTVPATCVIVCYFYERLNMDYWMLRALEHGCLRLPGRRAANCSLEASVPTVAVFMLKIFMSLVVGITSGVWVWSSKTLQTWQSLCNRRLGMRTRGKPCSGVSCGGGHCHYKAPTVMLHMTKTDPYLDNPTHV
SIO_010081: FZD9
subclass of: SO_0000673
so part of: FZD9
location: complement(155757..157379)
location: region:155757-157379:-1
so has part: feature:155757-157379:-1:exon

XP_005056456.2
type: Protein
SIO_000068: ncbiprotein

position:155757:-1
position: 155757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157379:-1
position: 157379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155757-157379:-1:exon

FKBP6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FKBP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(173509..193947)
location: region:173509-193947:-1
so has part: feature:173509-193947:-1:exon
subclass of: SO_0000010

101819580
type: Gene
SIO_000068: ncbigene

position:173509:-1
position: 173509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193947:-1
position: 193947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173509-193947:-1:exon

FKBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FKBP6
product: FK506 binding protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016303100.1
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(173509..173923,181762..181849,185103..185212,185501..185695,186669..186788,187925..188127,188698..188787,193713..193947))
location: region:173509-193947:-1
so has part: feature:193713-193947:-1:exon
so has part: feature:188698-188787:-1:exon
so has part: feature:187925-188127:-1:exon
so has part: feature:186669-186788:-1:exon
so has part: feature:185501-185695:-1:exon
so has part: feature:185103-185212:-1:exon
so has part: feature:181762-181849:-1:exon
so has part: feature:173509-173923:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193713-193947:-1:exon

position:193713:-1
position: 193713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188698-188787:-1:exon

position:188698:-1
position: 188698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188787:-1
position: 188787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:187925-188127:-1:exon

position:187925:-1
position: 187925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188127:-1
position: 188127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:186669-186788:-1:exon

position:186669:-1
position: 186669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186788:-1
position: 186788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:185501-185695:-1:exon

position:185501:-1
position: 185501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185695:-1
position: 185695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:185103-185212:-1:exon

position:185103:-1
position: 185103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185212:-1
position: 185212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:181762-181849:-1:exon

position:181762:-1
position: 181762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181849:-1
position: 181849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:173509-173923:-1:exon

position:173923:-1
position: 173923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FKBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FKBP6
product: FK506 binding protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016303101.1
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(173509..173923,181762..181849,185103..185212,185501..185695,186669..186788,187925..188127,188698..188787,190797..191063))
location: region:173509-191063:-1
so has part: feature:190797-191063:-1:exon
so has part: feature:188698-188787:-1:exon
so has part: feature:187925-188127:-1:exon
so has part: feature:186669-186788:-1:exon
so has part: feature:185501-185695:-1:exon
so has part: feature:185103-185212:-1:exon
so has part: feature:181762-181849:-1:exon
so has part: feature:173509-173923:-1:exon

position:191063:-1
position: 191063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190797-191063:-1:exon

position:190797:-1
position: 190797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188698-188787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187925-188127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186669-186788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:185501-185695:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:185103-185212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181762-181849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:173509-173923:-1:exon

FKBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FKBP6
product: FK506 binding protein 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016303102.1
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(178759..178875,181762..181849,185103..185212,185501..185695,186669..186788,187925..188127,188698..188787,193713..193947))
location: region:178759-193947:-1
so has part: feature:193713-193947:-1:exon
so has part: feature:188698-188787:-1:exon
so has part: feature:187925-188127:-1:exon
so has part: feature:186669-186788:-1:exon
so has part: feature:185501-185695:-1:exon
so has part: feature:185103-185212:-1:exon
so has part: feature:181762-181849:-1:exon
so has part: feature:178759-178875:-1:exon

position:178759:-1
position: 178759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193713-193947:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188698-188787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:187925-188127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186669-186788:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:185501-185695:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:185103-185212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:181762-181849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:178759-178875:-1:exon

position:178875:-1
position: 178875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FKBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FKBP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive peptidyl-prolyl cis-trans isomerase FKBP6
translation: MKLGKDITLWGLEIGLLSMTKGEAALFVLTPEYAYGQRGCPPSIPPNTTVLFKVEVLDFIDSEECDAFFELTYEQRDGLPLEKVLKVAATEREFGNYFFYKQCFKIAKDRYKRALSILGHSSSSEAEQSQINTSKLLLFLNLSLTYLKLERADRALKYGELALEMDQGSAKALFRCGQACLYMREYSKSRDFLVRAQCIQPFNRDINNELRKLARYYKEYMEMEKEMCCQMFDPLNSCG
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(181774..181849,185103..185212,185501..185695,186669..186788,187925..188127,188698..188713))
location: region:181774-188713:-1
so has part: feature:188698-188713:-1:exon
so has part: feature:187925-188127:-1:exon
so has part: feature:186669-186788:-1:exon
so has part: feature:185501-185695:-1:exon
so has part: feature:185103-185212:-1:exon
so has part: feature:181774-181849:-1:exon

XP_016158586.1
type: Protein
SIO_000068: ncbiprotein

position:181774:-1
position: 181774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188713:-1
position: 188713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188698-188713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187925-188127:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186669-186788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185501-185695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:185103-185212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181774-181849:-1:exon

FKBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FKBP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive peptidyl-prolyl cis-trans isomerase FKBP6
translation: MKLGKDITLWGLEIGLLSMTKGEAALFVLTPEYAYGQRGCPPSIPPNTTVLFKVEVLDFIDSEECDAFFELTYEQRDGLPLEKVLKVAATEREFGNYFFYKQCFKIAKDRYKRALSILGHSSSSEAEQSQINTSKLLLFLNLSLTYLKLERADRALKYGELALEMDQGSAKALFRCGQACLYMREYSKSRDFLVRAQCIQPFNRDINNELRKLARYYKEYMEMEKEMCCQMFDPLNSCG
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(181774..181849,185103..185212,185501..185695,186669..186788,187925..188127,188698..188713))
location: region:181774-188713:-1
so has part: feature:188698-188713:-1:exon
so has part: feature:187925-188127:-1:exon
so has part: feature:186669-186788:-1:exon
so has part: feature:185501-185695:-1:exon
so has part: feature:185103-185212:-1:exon
so has part: feature:181774-181849:-1:exon

XP_016158587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188698-188713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187925-188127:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186669-186788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185501-185695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:185103-185212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181774-181849:-1:exon

FKBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FKBP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive peptidyl-prolyl cis-trans isomerase FKBP6
translation: MKLGKDITLWGLEIGLLSMTKGEAALFVLTPEYAYGQRGCPPSIPPNTTVLFKVEVLDFIDSEECDAFFELTYEQRDGLPLEKVLKVAATEREFGNYFFYKQCFKIAKDRYKRALSILGHSSSSEAEQSQINTSKLLLFLNLSLTYLKLERADRALKYGELALEMDQGSAKALFRCGQACLYMREYSKSRDFLVRAQCIQPFNRDINNELRKLARYYKEYMEMEKEMCCQMFDPLNSCG
SIO_010081: FKBP6
subclass of: SO_0000673
so part of: FKBP6
location: complement(join(181774..181849,185103..185212,185501..185695,186669..186788,187925..188127,188698..188713))
location: region:181774-188713:-1
so has part: feature:188698-188713:-1:exon
so has part: feature:187925-188127:-1:exon
so has part: feature:186669-186788:-1:exon
so has part: feature:185501-185695:-1:exon
so has part: feature:185103-185212:-1:exon
so has part: feature:181774-181849:-1:exon

XP_016158588.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:188698-188713:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187925-188127:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:186669-186788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185501-185695:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:185103-185212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181774-181849:-1:exon

NSUN5
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NSUN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <194522..198804
location: region:194522-198804:1
so has part: feature:194522-198804:1:exon
subclass of: SO_0000010

101819770
type: Gene
SIO_000068: ncbigene

position:194522:1
position: 194522
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:198804:1
position: 198804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194522-198804:1:exon

NSUN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NSUN5
product: NOP2/Sun RNA methyltransferase family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005056401.1
SIO_010081: NSUN5
subclass of: SO_0000673
so part of: NSUN5
location: join(<194522..194545,194662..194784,194879..195053,195132..195240,195504..195642,196010..196125,196434..196612,196693..196897,196969..197121,197269..198804)
location: region:194522-198804:1
so has part: feature:194522-194545:1:exon
so has part: feature:194662-194784:1:exon
so has part: feature:194879-195053:1:exon
so has part: feature:195132-195240:1:exon
so has part: feature:195504-195642:1:exon
so has part: feature:196010-196125:1:exon
so has part: feature:196434-196612:1:exon
so has part: feature:196693-196897:1:exon
so has part: feature:196969-197121:1:exon
so has part: feature:197269-198804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:194522-194545:1:exon

position:194545:1
position: 194545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:194662-194784:1:exon

position:194662:1
position: 194662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194784:1
position: 194784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:194879-195053:1:exon

position:194879:1
position: 194879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195053:1
position: 195053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195132-195240:1:exon

position:195132:1
position: 195132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195240:1
position: 195240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:195504-195642:1:exon

position:195504:1
position: 195504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195642:1
position: 195642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196010-196125:1:exon

position:196010:1
position: 196010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196125:1
position: 196125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:196434-196612:1:exon

position:196434:1
position: 196434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196612:1
position: 196612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:196693-196897:1:exon

position:196693:1
position: 196693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196897:1
position: 196897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:196969-197121:1:exon

position:196969:1
position: 196969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197121:1
position: 197121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:197269-198804:1:exon

position:197269:1
position: 197269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NSUN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NSUN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable 28S rRNA (cytosine-C(5))-methyltransferase
translation: PVYNSGFPHVRRLYALVSETLRYASVLEKLLDGAALLQAEKKLAPQLAKVLVYDLLFGKGLKCGGRWKALARRHRARLEAELARMKVRHRVSRNEDLLAPEKAVSAAASQVPRYVRVNTLKTCVDDVIDFFKRQGYAYLGKAASVEELKALSGKKFLLDLHLPELLVFPSQTDLHDNLLYTSGHIILQDKASCLPAFLLGPVAGSHVIDACAAPGNKTSHLAAILKNKGQIFAFDVDPKRVATMNTLLTRAGVTGCQLAQQDFLTVDPRDPKYSRVTHILLDPSCSGSGMVTRGPGEEAASSAERLQALAGFQRRVLSHALSFPALQRLVYSTCSLHQEENEDVVQAVLQEWGSAFRLVPAFPSWPCRGLTAFSGSENCLRASPAETLTHGFFVAVLERCKEGAAAPSSLSAAAKENPQPGEGMEPGAAPKKRKKKKQRVK
SIO_010081: NSUN5
subclass of: SO_0000673
so part of: NSUN5
location: join(<194522..194545,194662..194784,194879..195053,195132..195240,195504..195642,196010..196125,196434..196612,196693..196897,196969..197121,197269..197371)
location: region:194522-197371:1
so has part: feature:194522-194545:1:exon
so has part: feature:194662-194784:1:exon
so has part: feature:194879-195053:1:exon
so has part: feature:195132-195240:1:exon
so has part: feature:195504-195642:1:exon
so has part: feature:196010-196125:1:exon
so has part: feature:196434-196612:1:exon
so has part: feature:196693-196897:1:exon
so has part: feature:196969-197121:1:exon
so has part: feature:197269-197371:1:exon

XP_005056458.1
type: Protein
SIO_000068: ncbiprotein

position:197371:1
position: 197371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:194522-194545:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:194662-194784:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:194879-195053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195132-195240:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:195504-195642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196010-196125:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196434-196612:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196693-196897:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196969-197121:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:197269-197371:1:exon

POM121
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: POM121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(199754..212999)
location: region:199754-212999:-1
so has part: feature:199754-212999:-1:exon
subclass of: SO_0000010

101819971
type: Gene
SIO_000068: ncbigene

position:199754:-1
position: 199754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212999:-1
position: 212999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199754-212999:-1:exon

POM121
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: POM121
product: POM121 transmembrane nucleoporin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016302873.1
SIO_010081: POM121
subclass of: SO_0000673
so part of: POM121
location: complement(join(199754..201106,201319..201447,202301..204040,204360..204530,204752..204854,205258..205382,206065..206135,206925..207016,207960..208131,208410..208490,210617..210781,211025..211207,212803..212999))
location: region:199754-212999:-1
so has part: feature:212803-212999:-1:exon
so has part: feature:211025-211207:-1:exon
so has part: feature:210617-210781:-1:exon
so has part: feature:208410-208490:-1:exon
so has part: feature:207960-208131:-1:exon
so has part: feature:206925-207016:-1:exon
so has part: feature:206065-206135:-1:exon
so has part: feature:205258-205382:-1:exon
so has part: feature:204752-204854:-1:exon
so has part: feature:204360-204530:-1:exon
so has part: feature:202301-204040:-1:exon
so has part: feature:201319-201447:-1:exon
so has part: feature:199754-201106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:212803-212999:-1:exon

position:212803:-1
position: 212803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:211025-211207:-1:exon

position:211025:-1
position: 211025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211207:-1
position: 211207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:210617-210781:-1:exon

position:210617:-1
position: 210617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210781:-1
position: 210781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:208410-208490:-1:exon

position:208410:-1
position: 208410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208490:-1
position: 208490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:207960-208131:-1:exon

position:207960:-1
position: 207960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208131:-1
position: 208131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:206925-207016:-1:exon

position:206925:-1
position: 206925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207016:-1
position: 207016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:206065-206135:-1:exon

position:206065:-1
position: 206065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206135:-1
position: 206135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:205258-205382:-1:exon

position:205258:-1
position: 205258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205382:-1
position: 205382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:204752-204854:-1:exon

position:204752:-1
position: 204752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204854:-1
position: 204854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:204360-204530:-1:exon

position:204360:-1
position: 204360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204530:-1
position: 204530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:202301-204040:-1:exon

position:202301:-1
position: 202301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204040:-1
position: 204040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:201319-201447:-1:exon

position:201319:-1
position: 201319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201447:-1
position: 201447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:199754-201106:-1:exon

position:201106:-1
position: 201106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POM121
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: POM121
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear envelope pore membrane protein POM 121
translation: MTRREEGGVVRGHGGGMGTQCRGRAPQRVRREPAETAGPCSRGRPPDNALEALLTPEAPPRAATPPGPRRRYPLPDARPAVPLCLPAARWEGGSPRSAPWARRAGPLRSPVTVRIAPPAVGIARSPALEQLVSPLAFPATSSPDPCAKETVLNAIRESRKRAVEEDEEEDQTSGNDQESKRRRHDSSGSGQSAFEPLVANGAPASLIPKPGSLKRGLVSQCPDDCSNKRSRTSSMSSLNNTYTGGIPSSIRNAIASSYSSSRGLTQLWKRSGVNMSPLSSPASSRPQTPEWPLKKAREEESHCSSASTPVKSDKELLTEKVVESPVWKKQNSLSPPSASGSSGKRKRKIPLLSSLRGDQLVLPPPPQLGYSITSEDLDAEKKAMMQWFNSVLEDKADAVPSTTAAMMPVSKPLVFAVTSPGPMPASTAPAPASSSLLDSLKKMQSSQAVSTAPDSTGIAAASQPPPSAAQPPAPAVSLESSSLPAISADIKPVPVLSTPGPSALPALAVQPPSSLAPPVFTELGQTPSKPPSFPKPSILFGMPNTTPDSQPALTVATALPTVATAAPTASTAVPTTVTATPSTTPIFKPIFGAVPKSENAAGCTAVTCTTATVEATASSGPASASPTSSIFKPIFGSVTAASSPAKVSPFAFKPAAQPASEPPTASTATLAGFTGLPSVIFTTAATTATTQSSSTDATIKPVFSFGLNPPASTGPAPSVTVTAATSTSTTQPFLFGGLASSAPSTEASFATSGPVFQFGKPPPATVTATTSVPGGPAFGQVPTSSTAAATTVGFSIFGSTTLTSSAPATTAQAPLTFGSSVSAFGSFSATTKPPPPYPGTGSQLTFSTGAADSQVPASKPPGPISFTPQFSFGAPPAQSVAQPAFGSGAQPAFGTTSAQGSFGTSSTQAAFGTTTSVFSFGTATSTTSSFGATTQTTSSSTGAAVFGTTPSPFTFGATTQSGPSTSAFGMGTPGLSSGSPAVAFSFGAGQSGAAPAATPFGSSLPQSALGAQGQSTPFAFTMTSTPNSKPAFGGPPVPTFGQGTPVPGAVGSGSSTLSFRTPSNPASSFGGVGTSFGSSTPIFSIGSGSKMGTRQRLQARRQHTRKK
SIO_010081: POM121
subclass of: SO_0000673
so part of: POM121
location: complement(join(201012..201106,201319..201447,202301..204040,204360..204530,204752..204854,205258..205382,206065..206135,206925..207016,207960..208131,208410..208490,210617..210781,211025..211207,212803..212999))
location: region:201012-212999:-1
so has part: feature:212803-212999:-1:exon
so has part: feature:211025-211207:-1:exon
so has part: feature:210617-210781:-1:exon
so has part: feature:208410-208490:-1:exon
so has part: feature:207960-208131:-1:exon
so has part: feature:206925-207016:-1:exon
so has part: feature:206065-206135:-1:exon
so has part: feature:205258-205382:-1:exon
so has part: feature:204752-204854:-1:exon
so has part: feature:204360-204530:-1:exon
so has part: feature:202301-204040:-1:exon
so has part: feature:201319-201447:-1:exon
so has part: feature:201012-201106:-1:exon

XP_016158359.1
type: Protein
SIO_000068: ncbiprotein

position:201012:-1
position: 201012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:212803-212999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:211025-211207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210617-210781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:208410-208490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207960-208131:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:206925-207016:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206065-206135:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:205258-205382:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:204752-204854:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:204360-204530:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:202301-204040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:201319-201447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:201012-201106:-1:exon

HIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215752..231109)
location: region:215752-231109:-1
so has part: feature:215752-231109:-1:exon
subclass of: SO_0000010

101820168
type: Gene
SIO_000068: ncbigene

position:215752:-1
position: 215752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231109:-1
position: 231109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215752-231109:-1:exon

HIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HIP1
product: huntingtin interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016302874.1
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(215752..215845,216155..216266,216785..216846,217319..217442,217572..217677,217790..217890,218267..218360,218469..218527,218646..218756,218863..218999,220453..220560,220667..220753,220846..220993,221111..221305,222001..222102,222189..222305,222395..222483,222573..222756,223087..223159,223315..223412,224001..224132,224579..224654,225432..225489,225860..226000,227187..227248,227405..227481,228161..228241,228686..228742,229293..229435,229986..230049,231089..231109))
location: region:215752-231109:-1
so has part: feature:231089-231109:-1:exon
so has part: feature:229986-230049:-1:exon
so has part: feature:229293-229435:-1:exon
so has part: feature:228686-228742:-1:exon
so has part: feature:228161-228241:-1:exon
so has part: feature:227405-227481:-1:exon
so has part: feature:227187-227248:-1:exon
so has part: feature:225860-226000:-1:exon
so has part: feature:225432-225489:-1:exon
so has part: feature:224579-224654:-1:exon
so has part: feature:224001-224132:-1:exon
so has part: feature:223315-223412:-1:exon
so has part: feature:223087-223159:-1:exon
so has part: feature:222573-222756:-1:exon
so has part: feature:222395-222483:-1:exon
so has part: feature:222189-222305:-1:exon
so has part: feature:222001-222102:-1:exon
so has part: feature:221111-221305:-1:exon
so has part: feature:220846-220993:-1:exon
so has part: feature:220667-220753:-1:exon
so has part: feature:220453-220560:-1:exon
so has part: feature:218863-218999:-1:exon
so has part: feature:218646-218756:-1:exon
so has part: feature:218469-218527:-1:exon
so has part: feature:218267-218360:-1:exon
so has part: feature:217790-217890:-1:exon
so has part: feature:217572-217677:-1:exon
so has part: feature:217319-217442:-1:exon
so has part: feature:216785-216846:-1:exon
so has part: feature:216155-216266:-1:exon
so has part: feature:215752-215845:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:231089-231109:-1:exon

position:231089:-1
position: 231089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:229986-230049:-1:exon

position:229986:-1
position: 229986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230049:-1
position: 230049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:229293-229435:-1:exon

position:229293:-1
position: 229293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229435:-1
position: 229435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:228686-228742:-1:exon

position:228686:-1
position: 228686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228742:-1
position: 228742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:228161-228241:-1:exon

position:228161:-1
position: 228161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228241:-1
position: 228241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:227405-227481:-1:exon

position:227405:-1
position: 227405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227481:-1
position: 227481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:227187-227248:-1:exon

position:227187:-1
position: 227187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227248:-1
position: 227248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:225860-226000:-1:exon

position:225860:-1
position: 225860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226000:-1
position: 226000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:225432-225489:-1:exon

position:225432:-1
position: 225432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225489:-1
position: 225489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:224579-224654:-1:exon

position:224579:-1
position: 224579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224654:-1
position: 224654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:224001-224132:-1:exon

position:224001:-1
position: 224001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224132:-1
position: 224132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:223315-223412:-1:exon

position:223315:-1
position: 223315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223412:-1
position: 223412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:223087-223159:-1:exon

position:223087:-1
position: 223087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223159:-1
position: 223159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:222573-222756:-1:exon

position:222573:-1
position: 222573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222756:-1
position: 222756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:222395-222483:-1:exon

position:222395:-1
position: 222395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222483:-1
position: 222483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:222189-222305:-1:exon

position:222189:-1
position: 222189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222305:-1
position: 222305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:222001-222102:-1:exon

position:222001:-1
position: 222001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222102:-1
position: 222102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:221111-221305:-1:exon

position:221111:-1
position: 221111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221305:-1
position: 221305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:220846-220993:-1:exon

position:220846:-1
position: 220846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220993:-1
position: 220993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:220667-220753:-1:exon

position:220667:-1
position: 220667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220753:-1
position: 220753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:220453-220560:-1:exon

position:220453:-1
position: 220453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220560:-1
position: 220560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:218863-218999:-1:exon

position:218863:-1
position: 218863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218999:-1
position: 218999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:218646-218756:-1:exon

position:218646:-1
position: 218646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218756:-1
position: 218756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:218469-218527:-1:exon

position:218469:-1
position: 218469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218527:-1
position: 218527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:218267-218360:-1:exon

position:218267:-1
position: 218267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218360:-1
position: 218360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:217790-217890:-1:exon

position:217790:-1
position: 217790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217890:-1
position: 217890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:217572-217677:-1:exon

position:217572:-1
position: 217572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217677:-1
position: 217677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:217319-217442:-1:exon

position:217319:-1
position: 217319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217442:-1
position: 217442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:216785-216846:-1:exon

position:216785:-1
position: 216785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216846:-1
position: 216846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:216155-216266:-1:exon

position:216155:-1
position: 216155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216266:-1
position: 216266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:215752-215845:-1:exon

position:215845:-1
position: 215845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: huntingtin-interacting protein 1
translation: MFGSGLGTVSINKAINAQEVAVKEKHARTCILGTHHEKGAQTFWSVVNRLPLSGNAVLCWKFCHVFHKLLRDGHSNVLKDSVRYKNELSDMSRMWGHLNEGYGQLCSIYLKLLRTKMDFHTKNPRFPGNLQMSDRQLDEAGENDVNNFFQLTVEMFDYLECELNLFQTVFSSLDMSRSVSVTAAGQCRLAPLIQVILDCSHLYDYTVKLLFKLHSCLPADTLQGHRDRFLEQFRKLKDLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPDSEPITDLVEMDAASQSLFDNKFDDIFGSSFSCDPFNFNSQNGMSKDDKDRLIEQLYGEITALKEGLENFKAESTRGAVQLRGRASELEAELAEQQHLKQQAQDESEFLRAELEELKKQREDTEKAQRSLTEIERRAQANEQRYSKLKEKYSELVQNHADLLRKNAEVTKQITVARQAQGDVEREKKELEDSFQRVSEQAQRKSQEQAEVLETLKRELATSRQELQVLQGTLESSTQAGAEQSTRIASLEQERDRLSRAAEQHREEMAALQAELQQLQDTLSHEQESSRTELEVLQTQLRDKESTEQALQQLLAKEQLSLLQGTTHEAKRMVQDALARMEDPAHISCTGSADCLLSQTLAASECAERLRDAHSKYLLDGAAVGSLLPCLALFAHLVSNTLLQGSATSHVAPVEPADRLLELCKQCGSEAVSYLSALQDPGTVASADCSLVTACLGQISAIGEELRPRGLDIKQEELGDLVDKEMAATAAAIETASARIEEMLSKARAGDTGVKLEVNERILGSCTGLMQAIHVLVLASKDLQREIVESGRGAASPKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGKGTFEELMVCSREIAASTAQLVAASKVKADKDSANLCKLQQASRGVSQATASVVASTKAGKSQVEEKDSMDFSSMTLTQIKRQEMDSQVRVLELENQLQKERQKLGELRKKHYELAGVAEGWEEDAAD
SIO_010081: HIP1
subclass of: SO_0000673
so part of: HIP1
location: complement(join(215835..215845,216155..216266,216785..216846,217319..217442,217572..217677,217790..217890,218267..218360,218469..218527,218646..218756,218863..218999,220453..220560,220667..220753,220846..220993,221111..221305,222001..222102,222189..222305,222395..222483,222573..222756,223087..223159,223315..223412,224001..224132,224579..224654,225432..225489,225860..226000,227187..227248,227405..227481,228161..228241,228686..228742,229293..229435,229986..230049,231089..231109))
location: region:215835-231109:-1
so has part: feature:231089-231109:-1:exon
so has part: feature:229986-230049:-1:exon
so has part: feature:229293-229435:-1:exon
so has part: feature:228686-228742:-1:exon
so has part: feature:228161-228241:-1:exon
so has part: feature:227405-227481:-1:exon
so has part: feature:227187-227248:-1:exon
so has part: feature:225860-226000:-1:exon
so has part: feature:225432-225489:-1:exon
so has part: feature:224579-224654:-1:exon
so has part: feature:224001-224132:-1:exon
so has part: feature:223315-223412:-1:exon
so has part: feature:223087-223159:-1:exon
so has part: feature:222573-222756:-1:exon
so has part: feature:222395-222483:-1:exon
so has part: feature:222189-222305:-1:exon
so has part: feature:222001-222102:-1:exon
so has part: feature:221111-221305:-1:exon
so has part: feature:220846-220993:-1:exon
so has part: feature:220667-220753:-1:exon
so has part: feature:220453-220560:-1:exon
so has part: feature:218863-218999:-1:exon
so has part: feature:218646-218756:-1:exon
so has part: feature:218469-218527:-1:exon
so has part: feature:218267-218360:-1:exon
so has part: feature:217790-217890:-1:exon
so has part: feature:217572-217677:-1:exon
so has part: feature:217319-217442:-1:exon
so has part: feature:216785-216846:-1:exon
so has part: feature:216155-216266:-1:exon
so has part: feature:215835-215845:-1:exon

XP_016158360.1
type: Protein
SIO_000068: ncbiprotein

position:215835:-1
position: 215835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:231089-231109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:229986-230049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229293-229435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228686-228742:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228161-228241:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227405-227481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227187-227248:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:225860-226000:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225432-225489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:224579-224654:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:224001-224132:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:223315-223412:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:223087-223159:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:222573-222756:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:222395-222483:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:222189-222305:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222001-222102:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:221111-221305:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:220846-220993:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:220667-220753:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:220453-220560:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:218863-218999:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:218646-218756:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:218469-218527:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:218267-218360:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:217790-217890:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:217572-217677:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:217319-217442:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:216785-216846:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:216155-216266:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:215835-215845:-1:exon

LOC101812529
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 270668..272099
location: region:270668-272099:1
so has part: feature:270668-272099:1:exon
subclass of: SO_0000010

101812529
type: Gene
SIO_000068: ncbigene

position:270668:1
position: 270668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272099:1
position: 272099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270668-272099:1:exon

LOC101812529
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812529
product: C-C motif chemokine 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005056362.1
SIO_010081: LOC101812529
subclass of: SO_0000673
so part of: LOC101812529
location: join(270668..270968,271249..271363,271859..272099)
location: region:270668-272099:1
so has part: feature:270668-270968:1:exon
so has part: feature:271249-271363:1:exon
so has part: feature:271859-272099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:270668-270968:1:exon

position:270968:1
position: 270968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271249-271363:1:exon

position:271249:1
position: 271249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271363:1
position: 271363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:271859-272099:1:exon

position:271859:1
position: 271859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101812529
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812529
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 5-like
translation: MKTFTAALSVLFVVVFCYQASSSPLSVNIYGPCCIEYITRPLPLSRVVKYEQTGSHCSLPAVIFTTIKDKLVCANPNDKWVQDIMNQLKDKHSG
SIO_010081: LOC101812529
subclass of: SO_0000673
so part of: LOC101812529
location: join(270896..270968,271249..271363,271859..271955)
location: region:270896-271955:1
so has part: feature:270896-270968:1:exon
so has part: feature:271249-271363:1:exon
so has part: feature:271859-271955:1:exon

XP_005056419.1
type: Protein
SIO_000068: ncbiprotein

position:270896:1
position: 270896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271955:1
position: 271955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270896-270968:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271249-271363:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271859-271955:1:exon

LOC101820368
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101820368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <273576..279421
location: region:273576-279421:1
so has part: feature:273576-279421:1:exon
subclass of: SO_0000010

101820368
type: Gene
SIO_000068: ncbigene

position:273576:1
position: 273576
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:279421:1
position: 279421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273576-279421:1:exon

LOC101820368
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101820368
product: E3 ubiquitin-protein ligase TRIM39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005056404.1
SIO_010081: LOC101820368
subclass of: SO_0000673
so part of: LOC101820368
location: join(<273576..273998,275062..275157,276957..277187,277292..277314,277871..277983,278472..279421)
location: region:273576-279421:1
so has part: feature:273576-273998:1:exon
so has part: feature:275062-275157:1:exon
so has part: feature:276957-277187:1:exon
so has part: feature:277292-277314:1:exon
so has part: feature:277871-277983:1:exon
so has part: feature:278472-279421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273576-273998:1:exon

position:273998:1
position: 273998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275062-275157:1:exon

position:275062:1
position: 275062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275157:1
position: 275157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276957-277187:1:exon

position:276957:1
position: 276957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277187:1
position: 277187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:277292-277314:1:exon

position:277292:1
position: 277292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277314:1
position: 277314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:277871-277983:1:exon

position:277871:1
position: 277871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277983:1
position: 277983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:278472-279421:1:exon

position:278472:1
position: 278472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101820368
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101820368
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM39-like
translation: PLERLQEEAICPICLEYMSEPVSIDCGHNFCRGCIAKHCQDKGLRADGPFSCPQCRASCHRSGFRPNRQLANIVESIRQLGLRGAPGPELELGTPLCPQHDERLKLFCEEDEEPICVVCRESLLHRPHSVYPIEEAAHVYQVKLQKSLENLLKEVEEVKKRESAERMKTQECKETVKKKRERIVSEFGKLHRLLADEEKLLLQKLEEEEKQILLLINENLARLVEEKCLLEELILEIKEKSQQPADGLLKDMKSILSRCEGVKFQSLKAVSVTLKENYSIPERCLGMRDMLKKFKVDVILDPETAHPDLTVSEDRKSVRRGSKKLLLSLFDNPKRFSSAPVVLGTPGFFSGRHYWEVQVGDKPEWGLGLCREAAGRKGSVLFSPSNGYWVLRLQSGGGYEALSAPVSPLALRVRPRRVGVFLDYEAGEISFYNVSDRSHIYTFTDKFSGNLRPLFFLGAFLGGRNAEPLVISWVRDPQGTGCIIL
SIO_010081: LOC101820368
subclass of: SO_0000673
so part of: LOC101820368
location: join(<273576..273998,275062..275157,276957..277187,277292..277314,277871..277983,278472..279043)
location: region:273576-279043:1
so has part: feature:273576-273998:1:exon
so has part: feature:275062-275157:1:exon
so has part: feature:276957-277187:1:exon
so has part: feature:277292-277314:1:exon
so has part: feature:277871-277983:1:exon
so has part: feature:278472-279043:1:exon

XP_005056461.1
type: Protein
SIO_000068: ncbiprotein

position:279043:1
position: 279043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273576-273998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275062-275157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276957-277187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:277292-277314:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277871-277983:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278472-279043:1:exon

LOC101812721
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(287108..289520)
location: region:287108-289520:-1
so has part: feature:287108-289520:-1:exon
subclass of: SO_0000010

101812721
type: Gene
SIO_000068: ncbigene

position:287108:-1
position: 287108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289520:-1
position: 289520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287108-289520:-1:exon

LOC101812721
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812721
product: C-C motif chemokine 4 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016303055.1
SIO_010081: LOC101812721
subclass of: SO_0000673
so part of: LOC101812721
location: complement(join(287108..287359,287761..287875,288382..289520))
location: region:287108-289520:-1
so has part: feature:288382-289520:-1:exon
so has part: feature:287761-287875:-1:exon
so has part: feature:287108-287359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288382-289520:-1:exon

position:288382:-1
position: 288382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287761-287875:-1:exon

position:287761:-1
position: 287761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287875:-1
position: 287875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287108-287359:-1:exon

position:287359:-1
position: 287359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101812721
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812721
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 4 homolog
translation: MKVSVVALAIVIAAFCCQTSAAPLGSDPPTSCCFSYISRQLPRSFVKDYYETNSQCSQPAVVFITRKGREVCANPMEDWVQQYVNELELD
SIO_010081: LOC101812721
subclass of: SO_0000673
so part of: LOC101812721
location: complement(join(287272..287359,287761..287875,288382..288451))
location: region:287272-288451:-1
so has part: feature:288382-288451:-1:exon
so has part: feature:287761-287875:-1:exon
so has part: feature:287272-287359:-1:exon

XP_016158541.1
type: Protein
SIO_000068: ncbiprotein

position:287272:-1
position: 287272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288451:-1
position: 288451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288382-288451:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287761-287875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287272-287359:-1:exon

LOC101812919
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 298180..300521
location: region:298180-300521:1
so has part: feature:298180-300521:1:exon
subclass of: SO_0000010

101812919
type: Gene
SIO_000068: ncbigene

position:298180:1
position: 298180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300521:1
position: 300521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298180-300521:1:exon

LOC101812919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812919
product: C-C motif chemokine 4 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005056364.1
SIO_010081: LOC101812919
subclass of: SO_0000673
so part of: LOC101812919
location: join(298180..298402,299527..299638,299991..300521)
location: region:298180-300521:1
so has part: feature:298180-298402:1:exon
so has part: feature:299527-299638:1:exon
so has part: feature:299991-300521:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:298180-298402:1:exon

position:298402:1
position: 298402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:299527-299638:1:exon

position:299527:1
position: 299527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299638:1
position: 299638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:299991-300521:1:exon

position:299991:1
position: 299991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101812919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C motif chemokine 4 homolog
translation: MRVSAAGLALLLILASFSQTFSGPAGLDMPICCFTYRQHKIPWKLVRRHYTTSSSCPQPAIVFVTKEGRQVCANPKHTWVRSYLQILEQN
SIO_010081: LOC101812919
subclass of: SO_0000673
so part of: LOC101812919
location: join(298330..298402,299527..299638,299991..300078)
location: region:298330-300078:1
so has part: feature:298330-298402:1:exon
so has part: feature:299527-299638:1:exon
so has part: feature:299991-300078:1:exon

XP_005056421.1
type: Protein
SIO_000068: ncbiprotein

position:298330:1
position: 298330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300078:1
position: 300078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298330-298402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:299527-299638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299991-300078:1:exon

LOC101820562
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101820562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315255..336127
location: region:315255-336127:1
so has part: feature:315255-336127:1:exon
subclass of: SO_0000010

101820562
type: Gene
SIO_000068: ncbigene

position:315255:1
position: 315255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336127:1
position: 336127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315255-336127:1:exon

LOC101820562
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101820562
product: myeloperoxidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056405.1
SIO_010081: LOC101820562
subclass of: SO_0000673
so part of: LOC101820562
location: join(315255..315393,315989..316112,318115..318244,319131..319331,319425..319740,321442..321602,322016..322268,323542..323712,329747..329984,330448..330665,335992..336127)
location: region:315255-336127:1
so has part: feature:315255-315393:1:exon
so has part: feature:315989-316112:1:exon
so has part: feature:318115-318244:1:exon
so has part: feature:319131-319331:1:exon
so has part: feature:319425-319740:1:exon
so has part: feature:321442-321602:1:exon
so has part: feature:322016-322268:1:exon
so has part: feature:323542-323712:1:exon
so has part: feature:329747-329984:1:exon
so has part: feature:330448-330665:1:exon
so has part: feature:335992-336127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315255-315393:1:exon

position:315393:1
position: 315393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315989-316112:1:exon

position:315989:1
position: 315989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316112:1
position: 316112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:318115-318244:1:exon

position:318115:1
position: 318115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318244:1
position: 318244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:319131-319331:1:exon

position:319131:1
position: 319131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319331:1
position: 319331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:319425-319740:1:exon

position:319425:1
position: 319425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319740:1
position: 319740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:321442-321602:1:exon

position:321442:1
position: 321442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321602:1
position: 321602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:322016-322268:1:exon

position:322016:1
position: 322016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322268:1
position: 322268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:323542-323712:1:exon

position:323542:1
position: 323542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323712:1
position: 323712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:329747-329984:1:exon

position:329747:1
position: 329747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329984:1
position: 329984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:330448-330665:1:exon

position:330448:1
position: 330448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330665:1
position: 330665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:335992-336127:1:exon

position:335992:1
position: 335992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101820562
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101820562
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloperoxidase
translation: MDFLKHLKDPIGRTRSAVRAADYLETTLKLLKRKLHLSGKQSFNVTDLLSRRQKEMISKGTGCDYQTRSIKCPEWDFYRTITGECNNRIHSHLGSSNRAFARWLPAVYEDGVSVPRGASEGKRYNGFPLPLVRKVSNEIAHTANENVTADQQLSLVFMHWGQWVNHDIDLAPASGEGASLELQCHTSCAFKPPCFPIKFPPDDPRMLGPHTCMPFVQSASACGPGAFRREQLNAATSFVDASTVYGSEGALATSLRNLSSPLGLMATNQHFTDAGLPLLPFESTAHSICLLTNKSANIPCFKAGDKRVTENLGLSAMHTLFVREHNRLATELRKLNPHWDGEKLYQESRKIVIAINQIITYRDYLPLLLAEETSKWIPLYSGYNEKVDPRASNVFSLAFRFGHTSVQPFVSRLNESFQPLGSFSHVPLHLTFCAPWRIIMEGGIDPLIRGMVVDHAKLMKQNQLLVEELQNHLFQQTEVMGLDLGAMNMQRGRDHGLPGYNAWRGFCGLSQPQTVEELSEVLGNPKLAKKFMDVYGTPYNIDLWIGAVAEPVVPQGRVGPLLSCIIGTQFRNLRDGDRFWWENPGVFTPQQLQALRKISVSRVICDNTHIKKIPRDVFKINTYPEDFTDCQEIDVLDLSSWKDEPESDTKVSNPTHQTSIGNP
SIO_010081: LOC101820562
subclass of: SO_0000673
so part of: LOC101820562
location: join(315255..315393,315989..316112,318115..318244,319131..319331,319425..319740,321442..321602,322016..322268,323542..323712,329747..329984,330448..330665,335992..336032)
location: region:315255-336032:1
so has part: feature:315255-315393:1:exon
so has part: feature:315989-316112:1:exon
so has part: feature:318115-318244:1:exon
so has part: feature:319131-319331:1:exon
so has part: feature:319425-319740:1:exon
so has part: feature:321442-321602:1:exon
so has part: feature:322016-322268:1:exon
so has part: feature:323542-323712:1:exon
so has part: feature:329747-329984:1:exon
so has part: feature:330448-330665:1:exon
so has part: feature:335992-336032:1:exon

XP_005056462.1
type: Protein
SIO_000068: ncbiprotein

position:336032:1
position: 336032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315255-315393:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315989-316112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:318115-318244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:319131-319331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319425-319740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:321442-321602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:322016-322268:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:323542-323712:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:329747-329984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:330448-330665:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:335992-336032:1:exon

LOC101813123
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101813123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(337218..344242)
location: region:337218-344242:-1
so has part: feature:337218-344242:-1:exon
subclass of: SO_0000010

101813123
type: Gene
SIO_000068: ncbigene

position:337218:-1
position: 337218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344242:-1
position: 344242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337218-344242:-1:exon

LOC101813123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101813123
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005056365.2
SIO_010081: LOC101813123
subclass of: SO_0000673
so part of: LOC101813123
location: complement(join(337218..338623,340955..341027,341530..341625,341864..342039,342443..342576,343880..344242))
location: region:337218-344242:-1
so has part: feature:343880-344242:-1:exon
so has part: feature:342443-342576:-1:exon
so has part: feature:341864-342039:-1:exon
so has part: feature:341530-341625:-1:exon
so has part: feature:340955-341027:-1:exon
so has part: feature:337218-338623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:343880-344242:-1:exon

position:343880:-1
position: 343880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:342443-342576:-1:exon

position:342443:-1
position: 342443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342576:-1
position: 342576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341864-342039:-1:exon

position:341864:-1
position: 341864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342039:-1
position: 342039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:341530-341625:-1:exon

position:341530:-1
position: 341530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341625:-1
position: 341625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340955-341027:-1:exon

position:340955:-1
position: 340955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341027:-1
position: 341027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:337218-338623:-1:exon

position:338623:-1
position: 338623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101813123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101813123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like
translation: MELFLLHYPFTCLLIAFLVLYQVKPAFRFFCKMTFYKLWLFTISIGVAILSIPRGRNVDNMMFLRILTRPLKHIFGIQIVVKGKENLRTKKPFVLVLNHQTSLDILVMMEVLPKRCVPIAKKEILYMGTFGLACWLAGVIFIDRKRREESIGTLTEVAHSLHKDDLRVLIFPEGTRNHGGSMLPFKRGAFQLAVKAQVPIIPVVLSSYNSFYNQKEKKFTSGKMIIQILPQVETLGLSPDDVPKLTEQVRDSMLSTYQGISGMMNGASH
SIO_010081: LOC101813123
subclass of: SO_0000673
so part of: LOC101813123
location: complement(join(338478..338623,340955..341027,341530..341625,341864..342039,342443..342576,343880..344064))
location: region:338478-344064:-1
so has part: feature:343880-344064:-1:exon
so has part: feature:342443-342576:-1:exon
so has part: feature:341864-342039:-1:exon
so has part: feature:341530-341625:-1:exon
so has part: feature:340955-341027:-1:exon
so has part: feature:338478-338623:-1:exon

XP_005056422.1
type: Protein
SIO_000068: ncbiprotein

position:338478:-1
position: 338478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344064:-1
position: 344064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343880-344064:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:342443-342576:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341864-342039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341530-341625:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340955-341027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338478-338623:-1:exon

LOC101813304
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101813304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(351761..370643)
location: region:351761-370643:-1
so has part: feature:351761-370643:-1:exon
subclass of: SO_0000010

101813304
type: Gene
SIO_000068: ncbigene

position:351761:-1
position: 351761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370643:-1
position: 370643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351761-370643:-1:exon

LOC101813304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101813304
product: eosinophil peroxidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016302875.1
SIO_010081: LOC101813304
subclass of: SO_0000673
so part of: LOC101813304
location: complement(join(351761..352022,352985..353222,355481..355651,356074..356320,357668..357828,360150..360462,362029..362235,363255..363384,364920..365040,366975..367150,368473..368566,369865..370029,370625..370643))
location: region:351761-370643:-1
so has part: feature:370625-370643:-1:exon
so has part: feature:369865-370029:-1:exon
so has part: feature:368473-368566:-1:exon
so has part: feature:366975-367150:-1:exon
so has part: feature:364920-365040:-1:exon
so has part: feature:363255-363384:-1:exon
so has part: feature:362029-362235:-1:exon
so has part: feature:360150-360462:-1:exon
so has part: feature:357668-357828:-1:exon
so has part: feature:356074-356320:-1:exon
so has part: feature:355481-355651:-1:exon
so has part: feature:352985-353222:-1:exon
so has part: feature:351761-352022:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370625-370643:-1:exon

position:370625:-1
position: 370625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369865-370029:-1:exon

position:369865:-1
position: 369865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370029:-1
position: 370029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368473-368566:-1:exon

position:368473:-1
position: 368473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368566:-1
position: 368566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:366975-367150:-1:exon

position:366975:-1
position: 366975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367150:-1
position: 367150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:364920-365040:-1:exon

position:364920:-1
position: 364920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365040:-1
position: 365040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:363255-363384:-1:exon

position:363255:-1
position: 363255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363384:-1
position: 363384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:362029-362235:-1:exon

position:362029:-1
position: 362029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362235:-1
position: 362235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:360150-360462:-1:exon

position:360150:-1
position: 360150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360462:-1
position: 360462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:357668-357828:-1:exon

position:357668:-1
position: 357668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357828:-1
position: 357828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:356074-356320:-1:exon

position:356074:-1
position: 356074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356320:-1
position: 356320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:355481-355651:-1:exon

position:355481:-1
position: 355481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355651:-1
position: 355651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:352985-353222:-1:exon

position:352985:-1
position: 352985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353222:-1
position: 353222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:351761-352022:-1:exon

position:352022:-1
position: 352022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101813304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101813304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eosinophil peroxidase
translation: MLKERLAPLTRTILHLGKNLPDASTVLGLLHSHFFAGMKAESFLESLMILSLFQASVSSSYGAALELPDTSLLSSVAEARQLVDAAYKRTRERIKKNLQNNALTPAELLRYFKQPVEGTRSAVRAADYLQTTLSLLKERLRWAVRGDFNVTDLLTPAQVEVIFKATGCDQQDRKISCASSGYRTITGECNNRRNPSLGASNRALARWLPAEYEDGLSVPRGWTEGKRFSGFPLPLVRQVSNEIVRFPPEQLQMDQQRSLMFMQWGQFIDHDLDFSPETPARVPFGGETDCDTSCAKEPPCFPIQIPANDPRIPNRRDCLPFFRSAASCARGRAREQINALTSFLDASVVYGSEAGLARRLRDRGAQGGLLAVNRNFTDRGRAYMPFGPMRKEPCLKASGPARIPCFLAGDTRASEMLELACMHTLFVREHNRLAGQLRSLNPHWNDERLYQEARKILGAMIQIITYRDYLPLLLGGRFRRFIPPYRGYDEFVDPRISNVFTLAFRFAHASIPPTVGRLDEYYRPITPEIQLRTSFFAVWRIIQEGGIDPYLRSLMANPAKLMTQQQMVVGELRDRLFEQVERIGFDLAALNMQRSRDHGLPGYNSWRKFCGLSQPSGVNSLGQVLRNQNLARKFLQLYGTPKNIDIWIGALAEPFVEGGRVGPLMACLIGTQFRHIRDGDRFWWQNPGVFTPRQRCSLAKISLSRIICDNTHITKVSRNIFRANRYPQGFVSCSQIPKLDLRAWKSQSTEQQGMICKQQQVLPAGS
SIO_010081: LOC101813304
subclass of: SO_0000673
so part of: LOC101813304
location: complement(join(351764..352022,352985..353222,355481..355651,356074..356320,357668..357828,360150..360462,362029..362235,363255..363384,364920..365040,366975..367150,368473..368566,369865..370029,370625..370643))
location: region:351764-370643:-1
so has part: feature:370625-370643:-1:exon
so has part: feature:369865-370029:-1:exon
so has part: feature:368473-368566:-1:exon
so has part: feature:366975-367150:-1:exon
so has part: feature:364920-365040:-1:exon
so has part: feature:363255-363384:-1:exon
so has part: feature:362029-362235:-1:exon
so has part: feature:360150-360462:-1:exon
so has part: feature:357668-357828:-1:exon
so has part: feature:356074-356320:-1:exon
so has part: feature:355481-355651:-1:exon
so has part: feature:352985-353222:-1:exon
so has part: feature:351764-352022:-1:exon

XP_016158361.1
type: Protein
SIO_000068: ncbiprotein

position:351764:-1
position: 351764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370625-370643:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369865-370029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368473-368566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366975-367150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:364920-365040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:363255-363384:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:362029-362235:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360150-360462:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357668-357828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356074-356320:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355481-355651:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:352985-353222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:351764-352022:-1:exon

TSPOAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(376728..442749)
location: region:376728-442749:-1
so has part: feature:376728-442749:-1:exon
subclass of: SO_0000010

101813498
type: Gene
SIO_000068: ncbigene

position:376728:-1
position: 376728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442749:-1
position: 442749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376728-442749:-1:exon

TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPOAP1
product: TSPO associated protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016302983.1
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(376728..377945,384359..384487,386001..386072,387808..387911,388754..388789,389147..389218,390605..390773,391188..391339,391469..391595,392205..393320,396393..396569,396850..397143,399046..399612,401087..401238,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442749))
location: region:376728-442749:-1
so has part: feature:442611-442749:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392205-393320:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:389147-389218:-1:exon
so has part: feature:388754-388789:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:376728-377945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442749:-1:exon

position:442611:-1
position: 442611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

position:430773:-1
position: 430773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430880:-1
position: 430880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

position:429053:-1
position: 429053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429181:-1
position: 429181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

position:427213:-1
position: 427213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427389:-1
position: 427389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

position:423794:-1
position: 423794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424048:-1
position: 424048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

position:419042:-1
position: 419042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419149:-1
position: 419149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

position:418175:-1
position: 418175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418258:-1
position: 418258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

position:417424:-1
position: 417424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417513:-1
position: 417513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

position:416607:-1
position: 416607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416729:-1
position: 416729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

position:416139:-1
position: 416139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416243:-1
position: 416243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

position:415334:-1
position: 415334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415384:-1
position: 415384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

position:409181:-1
position: 409181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409364:-1
position: 409364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

position:408653:-1
position: 408653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408873:-1
position: 408873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

position:405867:-1
position: 405867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405976:-1
position: 405976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

position:403965:-1
position: 403965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404074:-1
position: 404074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:401087-401238:-1:exon

position:401087:-1
position: 401087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401238:-1
position: 401238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:399046-399612:-1:exon

position:399046:-1
position: 399046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399612:-1
position: 399612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:396850-397143:-1:exon

position:396850:-1
position: 396850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397143:-1
position: 397143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:396393-396569:-1:exon

position:396393:-1
position: 396393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396569:-1
position: 396569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:392205-393320:-1:exon

position:392205:-1
position: 392205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393320:-1
position: 393320
reference: sequence
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TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPOAP1
product: TSPO associated protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016302984.1
SIO_010081: TSPOAP1
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TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPOAP1
product: TSPO associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005056369.1
SIO_010081: TSPOAP1
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TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPOAP1
product: TSPO associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005056368.1
SIO_010081: TSPOAP1
subclass of: SO_0000673
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TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPOAP1
product: TSPO associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005056367.1
SIO_010081: TSPOAP1
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urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392205-393320:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:389147-389218:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:388754-388786:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:376728-377945:-1:exon

TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPOAP1
product: TSPO associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016302980.1
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(376728..377945,384359..384487,386001..386072,387808..387911,388754..388789,389147..389218,390605..390773,391188..391339,391469..391595,392205..393320,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442749))
location: region:376728-442749:-1
so has part: feature:442611-442749:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392205-393320:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:389147-389218:-1:exon
so has part: feature:388754-388789:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:376728-377945:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392205-393320:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:389147-389218:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:388754-388789:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:376728-377945:-1:exon

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripheral-type benzodiazepine receptor-associated protein 1 isoform X6
translation: MDRTDRPPQSGADYSFLVSQNTKLLSALEDLRHRCCSLAEENSLLRRSCFPQTEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFAHQRAKDLTEQASALLAKDKQIEALQQECRELQAKLLAGKDDPRCLNIVEFDRLLRESQQEVLRLQRQIALKNFKECLRSSKMSSGSAMPSAAARLGPTSSCLKGASRLKEALGDPALGGRARREVEPGVQPLGPASEGHENFPPKNAITNHKSSRQIQQLEVELKKKRKKCENLEHEVRKKHKRCKELEIQLQEVQNENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRNVAERRQQLEVEHKEALLDLQEKQEEVRRLQQAQAEARREHEGAVQLLEARVKDLEDQCRSQTEQFSLLSQELQQFRLQTGKIDLLTSTLVTSELPLALCSSAPQPHWEKESAVPGLLPHQSTKKVHNEENDKLEPSQRGPDTTMGSPAAPTSAQKQSKKGESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPEPGSQGTAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGTPDAPLDVQVEAGPSPDILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKVIEVTSPTAGSVLVDLSQLQMFQVCHEVSVRTMSQYGESVDSVPAQISSVLLRSSHCTSPVCTTVPFRVPRGGPRASLPAHSPQHAPALLLPQKSPAESSDAKLADPSSSPAGSARPLAGKASSPPHLPSPSARLAPGTSPQGPGPVGDKKCLSVPPQQAGTALPGQGTEPGPSQELGLPQPAEGTEVQMEQARTKTPELMTDSGMKLQTEACHVCSVEEAPRGPSADTEREAENHLSSEPPSSPRQAGGTQDTFPDGNTSGSSCQDFLRLSSGKEVVKEMSRVKREEEKLSEMGRRQLTLFTEHNRSSDLSDILEEEEEDELSSEALEEKKWDQRGPCSQENGEKMDLCDTDSDEEILERILELPLQKNHSKKLFSIPEVTEDEDEDEDEKGATEEKIDPQDSLETQTYHSEKTEKPSNSKEPFLKEDGNNTSKNVSAQTPQGEHGAKESKVDADHANPAFGQLACSQRKVHWNWCYQENDQKSGSGTRPSWSKKKGNNFQEKIRSRPETSRKRQSDLTEHCSRLLSNCSQMGSGLYRAPSLREELNVVSSASGKEGLDLYSRARQGTLRKKAPRAVGSGEAEPAVMATHCPSPRSLEIDIEYDSEDDQDSTCASSPESRLWPERSQSCQGDWSDCSSQSEVAHSGGRRHLTRLEMMEEQGMESAGSLSQHLRFFCREKEAPSSEEQGWELDCKSSGWRRRFEHSSKGIRSTSLHKRASSHKDSGGPEPPGTAAWQAPSRRRSKSIRRSQMQKPLLSSPGPPRSTAPESSGKDDGIRIFVALFDYDPVSMSPNPDAAEEELPFKEGQILKVCGDKDADGFYRGECAGREGYIPCNMVSEVPVESSELKQQLLKQGFLPADRDTESPGNGTFSPPPRRQTVPPPKPRRSKKAGLDKQEYKSQPGQKHKDIEAELLTPRRMVAAFDYNPKESSPNTDVEAELTFSAGDVITVFGSMDDDGFYYGELNQQRGLVPSNFLEAVPLDGDMAEEFHSKDKEAPLLSAESQPSPDGSVDQSDSSPSPPLPAPSCLVPGEQCPEQASLALLTCSDAPGQSKKKRGFFFKGKNLFKKLGSNKKN
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(377730..377945,384359..384487,386001..386072,387808..387911,388754..388789,389147..389218,390605..390773,391188..391339,391469..391595,392205..393320,396393..396569,396850..397143,399046..399612,401087..401238,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442637))
location: region:377730-442637:-1
so has part: feature:442611-442637:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392205-393320:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:389147-389218:-1:exon
so has part: feature:388754-388789:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:377730-377945:-1:exon

XP_016158469.1
type: Protein
SIO_000068: ncbiprotein

position:377730:-1
position: 377730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442637:-1
position: 442637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:392205-393320:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:389147-389218:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:388754-388789:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:377730-377945:-1:exon

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripheral-type benzodiazepine receptor-associated protein 1 isoform X7
translation: MDRTDRPPQSGADYSFLVSQNTKLLSALEDLRHRCCSLAEENSLLRRSCFPQTEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFAHQRAKDLTEQASALLAKDKQIEALQQECRELQAKLLAGKDDPRCLNIVEFDRLLRESQQEVLRLQRQIALKNFKECLRSSKMSSGSAMPSAAARLGPTSSCLKGASRLKEALGDPALGGRARREVEPGVQPLGPASEGHENFPPKNAITNHKSSRQIQQLEVELKKKRKKCENLEHEVRKKHKRCKELEIQLQEVQNENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRNVAERRQQLEVEHKEALLDLQEKQEEVRRLQQAQAEARREHEGAVQLLEARVKDLEDQCRSQTEQFSLLSQELQQFRLQTGKIDLLTSTLVTSELPLALCSSAPQPHWEKESAVPGLLPHQSTKKVHNEENDKLEPSQRGPDTTMGSPAAPTSAQKQSKKGESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPEPGSQGTAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLMTFLPPELNDLTHSSYQEKSLVSASTSSGDKSELSIEEGSISPLAGRAEGDQEEPVSHTAVPYPRRLTLIKQLARSIVVGWEPPLLPAGCPDIQSYNIYVDEELRQNVKSGLQTKAVLEKLDLHSRAYRVSVQTVTERGRSDKLRCTFFVGQGFGVAPTMLKVRSVTATSAEVTWLPCNSNYSHGVYLNGQECDVTKPGVYWYTFHNLQPSTQYVAKLEARPMKTPWEEVPEGQEQDSAVIHFTTPLAGTPDAPLDVQVEAGPSPDILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKVIEVTSPTAGSVLVDLSQLQMFQVCHEVSVRTMSQYGESVDSVPAQISSVLLRSSHCTSPVCTTVPFRVPRGGPRASLPAHSPQHAPALLLPQKSPAESSDAKLADPSSSPAGSARPLAGKASSPPHLPSPSARLAPGTSPQGPGPVGDKKCLSVPPQQAGTALPGQGTEPGPSQELGLPQPAEGTEVQMEQARTKTPELMTDSGMKLQTEACHVCSVEEAPRGPSADTEREAENHLSSEPPSSPRQAGGTQDTFPDGNTSGSSCQDFLRLSSGKEVVKEMSRVKREEEKLSEMGRRQLTLFTEHNRSSDLSDILEEEEEDELSSEALEEKKWDQRGPCSQENGEKASSHKDSGGPEPPGTAAWQAPSRRRSKSIRRSQMQKPLLSSPGPPRSTAPESSGKDDGIRIFVALFDYDPVSMSPNPDAAEEELPFKEGQILKVCGDKDADGFYRGECAGREGYIPCNMVSEVPVESSELKQQLLKQGFLPADRDTESPGNGTFSPPPRRQTVPPPKPRRSKKAGLDKQEYKSQPGQKHKDIEAELLTPRRMVAAFDYNPKESSPNTDVEAELTFSAGDVITVFGSMDDDGFYYGELNQQRGLVPSNFLEAVPLDGDMAEEFHSKDKEAPLLSAESQPSPDGSVDQSDSSPSPPLPAPSCLVPGEQCPEQASLALLTCSDAPGQSKKKRGFFFKGKNLFKKLGSNKKN
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(377730..377945,384359..384487,386001..386072,387808..387911,388754..388789,389147..389218,390605..390773,391188..391339,391469..391595,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442637))
location: region:377730-442637:-1
so has part: feature:442611-442637:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:389147-389218:-1:exon
so has part: feature:388754-388789:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:377730-377945:-1:exon

XP_016158470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:389147-389218:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:388754-388789:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:377730-377945:-1:exon

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripheral-type benzodiazepine receptor-associated protein 1 isoform X4
translation: MDRTDRPPQSGADYSFLVSQNTKLLSALEDLRHRCCSLAEENSLLRRSCFPQTEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFAHQRAKDLTEQASALLAKDKQIEALQQECRELQAKLLAGKDDPRCLNIVEFDRLLRESQQEVLRLQRQIALKNFKECLRSSKMSSGSAMPSAAARLGPTSSCLKGASRLKEALGDPALGGRARREVEPGVQPLGPASEGHENFPPKNAITNHKSSRQIQQLEVELKKKRKKCENLEHEVRKKHKRCKELEIQLQEVQNENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRNVAERRQQLEVEHKEALLDLQEKQEEVRRLQQAQAEARREHEGAVQLLEARVKDLEDQCRSQTEQFSLLSQELQQFRLQTGKIDLLTSTLVTSELPLALCSSAPQPHWEKESAVPGLLPHQSTKKVHNEENDKLEPSQRGPDTTMGSPAAPTSAQKQSKKGESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPEPGSQGTAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLMTFLPPELNDLTHSSYQEKSLVSASTSSGDKSELSIEEGSISPLAGRAEGDQEEPVSHTAVPYPRRLTLIKQLARSIVVGWEPPLLPAGCPDIQSYNIYVDEELRQNVKSGLQTKAVLEKLDLHSRAYRVSVQTVTERGRSDKLRCTFFVGQGFGVAPTMLKVRSVTATSAEVTWLPCNSNYSHGVYLNGQECDVTKPGVYWYTFHNLQPSTQYVAKLEARPMKTPWEEVPEGQEQDSAVIHFTTPLAGTPDAPLDVQVEAGPSPDILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKVIEVTSPTAGSVLVDLSQLQMFQVCHEVSVRTMSQYGESVDSVPAQISSVLLRSSHCTSPVCTTVPFRVPRGGPRASLPAHSPQHAPALLLPQKSPAESSDAKLADPSSSPAGSARPLAGKASSPPHLPSPSARLAPGTSPQGPGPVGDKKCLSVPPQQAGTALPGQGTEPGPSQELGLPQPAEGTEVQMEQARTKTPELMTDSGMKLQTEACHVCSVEEAPRGPSADTEREAENHLSSEPPSSPRQAGGTQDTFPDGNTSGSSCQDFLRLSSGKEVVKEMSRVKREEEKLSEMGRRQLTLFTEHNRSSDLSDILEEEEEDELSSEALEEKKWDQRGPCSQENGEKMDLCDTDSDEEILERILELPLQKNHSKKLFSIPEVTEDEDEDEDEKGATEEKIDPQDSLETQTYHSEKTEKPSNSKEPFLKEDGNNTSKNVSAQTPQGEHGAKESKVDADHANPAFGQLACSQRKVHWNWCYQENDQKSGSGTRPSWSKKKGNNFQEKIRSRPETSRKRQSDLTEHCSRLLSNCSQMGSGLYRAPSLREELNVVSSASGKEGLDLYSRARQGTLRKKAPRAVGSGEAEPAVMATHCPSPRSLEIDIEYDSEDDQDSTCASSPESRLWPERSQSCQGDWSDCSSQSEVAHSGGRRHLTRLEMMEEQGMESAGSLSQHLRFFCREKEAPSSEEQGWELDCKSSGWRRRFEHSSKGIRSTSLHKRASSHKDSGGPEPPGTAAWQAPSRRRSKSIRRSQMQKPLLSSPGPPRSTAPESSGKDDGIRIFVALFDYDPVSMSPNPDAAEEELPFKEGQILKVCGDKDADGFYRGECAGREGYIPCNMVSEVPVESSELKQQLLKQGFLPADRDTESPGLDKQEYKSQPGQKHKDIEAELLTPRRMVAAFDYNPKESSPNTDVEAELTFSAGDVITVFGSMDDDGFYYGELNQQRGLVPSNFLEAVPLDGDMAEEFHSKDKEAPLLSAESQPSPDGSVDQSDSSPSPPLPAPSCLVPGEQCPEQASLALLTCSDAPGQSKKKRGFFFKGKNLFKKLGSNKK…
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(377730..377945,384359..384487,386001..386072,387808..387911,388754..388786,390605..390773,391188..391339,391469..391595,392205..393320,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442637))
location: region:377730-442637:-1
so has part: feature:442611-442637:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392205-393320:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:388754-388786:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:377730-377945:-1:exon

XP_005056426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392205-393320:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:388754-388786:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:377730-377945:-1:exon

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripheral-type benzodiazepine receptor-associated protein 1 isoform X3
translation: MDRTDRPPQSGADYSFLVSQNTKLLSALEDLRHRCCSLAEENSLLRRSCFPQTEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFAHQRAKDLTEQASALLAKDKQIEALQQECRELQAKLLAGKDDPRCLNIVEFDRLLRESQQEVLRLQRQIALKNFKECLRSSKMSSGSAMPSAAARLGPTSSCLKGASRLKEALGDPALGGRARREVEPGVQPLGPASEGHENFPPKNAITNHKSSRQIQQLEVELKKKRKKCENLEHEVRKKHKRCKELEIQLQEVQNENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRNVAERRQQLEVEHKEALLDLQEKQEEVRRLQQAQAEARREHEGAVQLLEARVKDLEDQCRSQTEQFSLLSQELQQFRLQTGKIDLLTSTLVTSELPLALCSSAPQPHWEKESAVPGLLPHQSTKKVHNEENDKLEPSQRGPDTTMGSPAAPTSAQKQSKKGESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPEPGSQGTAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLMTFLPPELNDLTHSSYQEKSLVSASTSSGDKSELSIEEGSISPLAGRAEGDQEEPVSHTAVPYPRRLTLIKQLARSIVVGWEPPLLPAGCPDIQSYNIYVDEELRQNVKSGLQTKAVLEKLDLHSRAYRVSVQTVTERGRSDKLRCTFFVGQGFGVAPTMLKVRSVTATSAEVTWLPCNSNYSHGVYLNGQECDVTKPGVYWYTFHNLQPSTQYVAKLEARPMKTPWEEVPEGQEQDSAVIHFTTPLAGTPDAPLDVQVEAGPSPDILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKVIEVTSPTAGSVLVDLSQLQMFQVCHEVSVRTMSQYGESVDSVPAQISSVLLRSSHCTSPVCTTVPFRVPRGGPRASLPAHSPQHAPALLLPQKSPAESSDAKLADPSSSPAGSARPLAGKASSPPHLPSPSARLAPGTSPQGPGPVGDKKCLSVPPQQAGTALPGQGTEPGPSQELGLPQPAEGTEVQMEQARTKTPELMTDSGMKLQTEACHVCSVEEAPRGPSADTEREAENHLSSEPPSSPRQAGGTQDTFPDGNTSGSSCQDFLRLSSGKEVVKEMSRVKREEEKLSEMGRRQLTLFTEHNRSSDLSDILEEEEEDELSSEALEEKKWDQRGPCSQENGEKMDLCDTDSDEEILERILELPLQKNHSKKLFSIPEVTEDEDEDEDEKGATEEKIDPQDSLETQTYHSEKTEKPSNSKEPFLKEDGNNTSKNVSAQTPQGEHGAKESKVDADHANPAFGQLACSQRKVHWNWCYQENDQKSGSGTRPSWSKKKGNNFQEKIRSRPETSRKRQSDLTEHCSRLLSNCSQMGSGLYRAPSLREELNVVSSASGKEGLDLYSRARQGTLRKKAPRAVGSGEAEPAVMATHCPSPRSLEIDIEYDSEDDQDSTCASSPESRLWPERSQSCQGDWSDCSSQSEVAHSGGRRHLTRLEMMEEQGMESAGSLSQHLRFFCREKEAPSSEEQGWELDCKSSGWRRRFEHSSKGIRSTSLHKRASSHKDSGGPEPPGTAAWQAPSRRRSKSIRRSQMQKPLLSSPGPPRSTAPESSGKDDGIRIFVALFDYDPVSMSPNPDAAEEELPFKEGQILKVCGDKDADGFYRGECAGREGYIPCNMVSEVPVESSELKQQLLKQGFLPADRDTESPAGLDKQEYKSQPGQKHKDIEAELLTPRRMVAAFDYNPKESSPNTDVEAELTFSAGDVITVFGSMDDDGFYYGELNQQRGLVPSNFLEAVPLDGDMAEEFHSKDKEAPLLSAESQPSPDGSVDQSDSSPSPPLPAPSCLVPGEQCPEQASLALLTCSDAPGQSKKKRGFFFKGKNLFKKLGSNK…
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(377730..377945,384359..384487,386001..386072,387808..387911,388754..388789,390605..390773,391188..391339,391469..391595,392205..393320,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442637))
location: region:377730-442637:-1
so has part: feature:442611-442637:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392205-393320:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:388754-388789:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:377730-377945:-1:exon

XP_005056425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392205-393320:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:388754-388789:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:377730-377945:-1:exon

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripheral-type benzodiazepine receptor-associated protein 1 isoform X2
translation: MDRTDRPPQSGADYSFLVSQNTKLLSALEDLRHRCCSLAEENSLLRRSCFPQTEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFAHQRAKDLTEQASALLAKDKQIEALQQECRELQAKLLAGKDDPRCLNIVEFDRLLRESQQEVLRLQRQIALKNFKECLRSSKMSSGSAMPSAAARLGPTSSCLKGASRLKEALGDPALGGRARREVEPGVQPLGPASEGHENFPPKNAITNHKSSRQIQQLEVELKKKRKKCENLEHEVRKKHKRCKELEIQLQEVQNENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRNVAERRQQLEVEHKEALLDLQEKQEEVRRLQQAQAEARREHEGAVQLLEARVKDLEDQCRSQTEQFSLLSQELQQFRLQTGKIDLLTSTLVTSELPLALCSSAPQPHWEKESAVPGLLPHQSTKKVHNEENDKLEPSQRGPDTTMGSPAAPTSAQKQSKKGESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPEPGSQGTAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLMTFLPPELNDLTHSSYQEKSLVSASTSSGDKSELSIEEGSISPLAGRAEGDQEEPVSHTAVPYPRRLTLIKQLARSIVVGWEPPLLPAGCPDIQSYNIYVDEELRQNVKSGLQTKAVLEKLDLHSRAYRVSVQTVTERGRSDKLRCTFFVGQGFGVAPTMLKVRSVTATSAEVTWLPCNSNYSHGVYLNGQECDVTKPGVYWYTFHNLQPSTQYVAKLEARPMKTPWEEVPEGQEQDSAVIHFTTPLAGTPDAPLDVQVEAGPSPDILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKVIEVTSPTAGSVLVDLSQLQMFQVCHEVSVRTMSQYGESVDSVPAQISSVLLRSSHCTSPVCTTVPFRVPRGGPRASLPAHSPQHAPALLLPQKSPAESSDAKLADPSSSPAGSARPLAGKASSPPHLPSPSARLAPGTSPQGPGPVGDKKCLSVPPQQAGTALPGQGTEPGPSQELGLPQPAEGTEVQMEQARTKTPELMTDSGMKLQTEACHVCSVEEAPRGPSADTEREAENHLSSEPPSSPRQAGGTQDTFPDGNTSGSSCQDFLRLSSGKEVVKEMSRVKREEEKLSEMGRRQLTLFTEHNRSSDLSDILEEEEEDELSSEALEEKKWDQRGPCSQENGEKMDLCDTDSDEEILERILELPLQKNHSKKLFSIPEVTEDEDEDEDEKGATEEKIDPQDSLETQTYHSEKTEKPSNSKEPFLKEDGNNTSKNVSAQTPQGEHGAKESKVDADHANPAFGQLACSQRKVHWNWCYQENDQKSGSGTRPSWSKKKGNNFQEKIRSRPETSRKRQSDLTEHCSRLLSNCSQMGSGLYRAPSLREELNVVSSASGKEGLDLYSRARQGTLRKKAPRAVGSGEAEPAVMATHCPSPRSLEIDIEYDSEDDQDSTCASSPESRLWPERSQSCQGDWSDCSSQSEVAHSGGRRHLTRLEMMEEQGMESAGSLSQHLRFFCREKEAPSSEEQGWELDCKSSGWRRRFEHSSKGIRSTSLHKRASSHKDSGGPEPPGTAAWQAPSRRRSKSIRRSQMQKPLLSSPGPPRSTAPESSGKDDGIRIFVALFDYDPVSMSPNPDAAEEELPFKEGQILKVCGDKDADGFYRGECAGREGYIPCNMVSEVPVESSELKQQLLKQGFLPADRDTESPGNGTFSPPPRRQTVPPPKPRRSKKGLDKQEYKSQPGQKHKDIEAELLTPRRMVAAFDYNPKESSPNTDVEAELTFSAGDVITVFGSMDDDGFYYGELNQQRGLVPSNFLEAVPLDGDMAEEFHSKDKEAPLLSAESQPSPDGSVDQSDSSPSPPLPAPSCLVPGEQCPEQASLALLTCSDAPG…
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(377730..377945,384359..384487,386001..386072,387808..387911,388754..388786,389147..389218,390605..390773,391188..391339,391469..391595,392205..393320,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442637))
location: region:377730-442637:-1
so has part: feature:442611-442637:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392205-393320:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:389147-389218:-1:exon
so has part: feature:388754-388786:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:377730-377945:-1:exon

XP_005056424.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392205-393320:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:389147-389218:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:388754-388786:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:377730-377945:-1:exon

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripheral-type benzodiazepine receptor-associated protein 1 isoform X1
translation: MDRTDRPPQSGADYSFLVSQNTKLLSALEDLRHRCCSLAEENSLLRRSCFPQTEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFAHQRAKDLTEQASALLAKDKQIEALQQECRELQAKLLAGKDDPRCLNIVEFDRLLRESQQEVLRLQRQIALKNFKECLRSSKMSSGSAMPSAAARLGPTSSCLKGASRLKEALGDPALGGRARREVEPGVQPLGPASEGHENFPPKNAITNHKSSRQIQQLEVELKKKRKKCENLEHEVRKKHKRCKELEIQLQEVQNENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRNVAERRQQLEVEHKEALLDLQEKQEEVRRLQQAQAEARREHEGAVQLLEARVKDLEDQCRSQTEQFSLLSQELQQFRLQTGKIDLLTSTLVTSELPLALCSSAPQPHWEKESAVPGLLPHQSTKKVHNEENDKLEPSQRGPDTTMGSPAAPTSAQKQSKKGESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPEPGSQGTAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLMTFLPPELNDLTHSSYQEKSLVSASTSSGDKSELSIEEGSISPLAGRAEGDQEEPVSHTAVPYPRRLTLIKQLARSIVVGWEPPLLPAGCPDIQSYNIYVDEELRQNVKSGLQTKAVLEKLDLHSRAYRVSVQTVTERGRSDKLRCTFFVGQGFGVAPTMLKVRSVTATSAEVTWLPCNSNYSHGVYLNGQECDVTKPGVYWYTFHNLQPSTQYVAKLEARPMKTPWEEVPEGQEQDSAVIHFTTPLAGTPDAPLDVQVEAGPSPDILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKVIEVTSPTAGSVLVDLSQLQMFQVCHEVSVRTMSQYGESVDSVPAQISSVLLRSSHCTSPVCTTVPFRVPRGGPRASLPAHSPQHAPALLLPQKSPAESSDAKLADPSSSPAGSARPLAGKASSPPHLPSPSARLAPGTSPQGPGPVGDKKCLSVPPQQAGTALPGQGTEPGPSQELGLPQPAEGTEVQMEQARTKTPELMTDSGMKLQTEACHVCSVEEAPRGPSADTEREAENHLSSEPPSSPRQAGGTQDTFPDGNTSGSSCQDFLRLSSGKEVVKEMSRVKREEEKLSEMGRRQLTLFTEHNRSSDLSDILEEEEEDELSSEALEEKKWDQRGPCSQENGEKMDLCDTDSDEEILERILELPLQKNHSKKLFSIPEVTEDEDEDEDEKGATEEKIDPQDSLETQTYHSEKTEKPSNSKEPFLKEDGNNTSKNVSAQTPQGEHGAKESKVDADHANPAFGQLACSQRKVHWNWCYQENDQKSGSGTRPSWSKKKGNNFQEKIRSRPETSRKRQSDLTEHCSRLLSNCSQMGSGLYRAPSLREELNVVSSASGKEGLDLYSRARQGTLRKKAPRAVGSGEAEPAVMATHCPSPRSLEIDIEYDSEDDQDSTCASSPESRLWPERSQSCQGDWSDCSSQSEVAHSGGRRHLTRLEMMEEQGMESAGSLSQHLRFFCREKEAPSSEEQGWELDCKSSGWRRRFEHSSKGIRSTSLHKRASSHKDSGGPEPPGTAAWQAPSRRRSKSIRRSQMQKPLLSSPGPPRSTAPESSGKDDGIRIFVALFDYDPVSMSPNPDAAEEELPFKEGQILKVCGDKDADGFYRGECAGREGYIPCNMVSEVPVESSELKQQLLKQGFLPADRDTESPGNGTFSPPPRRQTVPPPKPRRSKKAGLDKQEYKSQPGQKHKDIEAELLTPRRMVAAFDYNPKESSPNTDVEAELTFSAGDVITVFGSMDDDGFYYGELNQQRGLVPSNFLEAVPLDGDMAEEFHSKDKEAPLLSAESQPSPDGSVDQSDSSPSPPLPAPSCLVPGEQCPEQASLALLTCSDAP…
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(377730..377945,384359..384487,386001..386072,387808..387911,388754..388789,389147..389218,390605..390773,391188..391339,391469..391595,392205..393320,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442637))
location: region:377730-442637:-1
so has part: feature:442611-442637:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392205-393320:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:389147-389218:-1:exon
so has part: feature:388754-388789:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:377730-377945:-1:exon

XP_016158466.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392205-393320:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:389147-389218:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:388754-388789:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:377730-377945:-1:exon

TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPOAP1
product: TSPO associated protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016302981.1
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(377859..377945,381225..381280,384359..384487,386001..386072,387808..387911,388754..388789,389147..389218,390605..390773,391188..391339,391469..391595,392205..393320,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442749))
location: region:377859-442749:-1
so has part: feature:442611-442749:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392205-393320:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:389147-389218:-1:exon
so has part: feature:388754-388789:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:381225-381280:-1:exon
so has part: feature:377859-377945:-1:exon

position:377859:-1
position: 377859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392205-393320:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:389147-389218:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:388754-388789:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:381225-381280:-1:exon

position:381225:-1
position: 381225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381280:-1
position: 381280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:377859-377945:-1:exon

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripheral-type benzodiazepine receptor-associated protein 1 isoform X5
translation: MDRTDRPPQSGADYSFLVSQNTKLLSALEDLRHRCCSLAEENSLLRRSCFPQTEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFAHQRAKDLTEQASALLAKDKQIEALQQECRELQAKLLAGKDDPRCLNIVEFDRLLRESQQEVLRLQRQIALKNFKECLRSSKMSSGSAMPSAAARLGPTSSCLKGASRLKEALGDPALGGRARREVEPGVQPLGPASEGHENFPPKNAITNHKSSRQIQQLEVELKKKRKKCENLEHEVRKKHKRCKELEIQLQEVQNENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRNVAERRQQLEVEHKEALLDLQEKQEEVRRLQQAQAEARREHEGAVQLLEARVKDLEDQCRSQTEQFSLLSQELQQFRLQTGKIDLLTSTLVTSELPLALCSSAPQPHWEKESAVPGLLPHQSTKKVHNEENDKLEPSQRGPDTTMGSPAAPTSAQKQSKKGESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPEPGSQGTAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLMTFLPPELNDLTHSSYQEKSLVSASTSSGDKSELSIEEGSISPLAGRAEGDQEEPVSHTAVPYPRRLTLIKQLARSIVVGWEPPLLPAGCPDIQSYNIYVDEELRQNVKSGLQTKAVLEKLDLHSRAYRVSVQTVTERGRSDKLRCTFFVGQGFGVAPTMLKVRSVTATSAEVTWLPCNSNYSHGVYLNGQECDVTKPGVYWYTFHNLQPSTQYVAKLEARPMKTPWEEVPEGQEQDSAVIHFTTPLAGTPDAPLDVQVEAGPSPDILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKVIEVTSPTAGSVLVDLSQLQMFQVCHEVSVRTMSQYGESVDSVPAQISSVLLRSSHCTSPVCTTVPFRVPRGGPRASLPAHSPQHAPALLLPQKSPAESSDAKLADPSSSPAGSARPLAGKASSPPHLPSPSARLAPGTSPQGPGPVGDKKCLSVPPQQAGTALPGQGTEPGPSQELGLPQPAEGTEVQMEQARTKTPELMTDSGMKLQTEACHVCSVEEAPRGPSADTEREAENHLSSEPPSSPRQAGGTQDTFPDGNTSGSSCQDFLRLSSGKEVVKEMSRVKREEEKLSEMGRRQLTLFTEHNRSSDLSDILEEEEEDELSSEALEEKKWDQRGPCSQENGEKMDLCDTDSDEEILERILELPLQKNHSKKLFSIPEVTEDEDEDEDEKGATEEKIDPQDSLETQTYHSEKTEKPSNSKEPFLKEDGNNTSKNVSAQTPQGEHGAKESKVDADHANPAFGQLACSQRKVHWNWCYQENDQKSGSGTRPSWSKKKGNNFQEKIRSRPETSRKRQSDLTEHCSRLLSNCSQMGSGLYRAPSLREELNVVSSASGKEGLDLYSRARQGTLRKKAPRAVGSGEAEPAVMATHCPSPRSLEIDIEYDSEDDQDSTCASSPESRLWPERSQSCQGDWSDCSSQSEVAHSGGRRHLTRLEMMEEQGMESAGSLSQHLRFFCREKEAPSSEEQGWELDCKSSGWRRRFEHSSKGIRSTSLHKRASSHKDSGGPEPPGTAAWQAPSRRRSKSIRRSQMQKPLLSSPGPPRSTAPESSGKDDGIRIFVALFDYDPVSMSPNPDAAEEELPFKEGQILKVCGDKDADGFYRGECAGREGYIPCNMVSEVPVESSELKQQLLKQGFLPADRDTESPGNGTFSPPPRRQTVPPPKPRRSKKAGLDKQEYKSQPGQKHKDIEAELLTPRRMVAAFDYNPKESSPNTDVEAELTFSAGDVITVFGSMDDDGFYYGELNQQRGLVPSNFLEAVPLDGDMAEEFHSKDKEAPLLSAESQRMRKRRVQ
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(381254..381280,384359..384487,386001..386072,387808..387911,388754..388789,389147..389218,390605..390773,391188..391339,391469..391595,392205..393320,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442637))
location: region:381254-442637:-1
so has part: feature:442611-442637:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392205-393320:-1:exon
so has part: feature:391469-391595:-1:exon
so has part: feature:391188-391339:-1:exon
so has part: feature:390605-390773:-1:exon
so has part: feature:389147-389218:-1:exon
so has part: feature:388754-388789:-1:exon
so has part: feature:387808-387911:-1:exon
so has part: feature:386001-386072:-1:exon
so has part: feature:384359-384487:-1:exon
so has part: feature:381254-381280:-1:exon

XP_016158467.1
type: Protein
SIO_000068: ncbiprotein

position:381254:-1
position: 381254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392205-393320:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391469-391595:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391188-391339:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:390605-390773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:389147-389218:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:388754-388789:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:387808-387911:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:386001-386072:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:384359-384487:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:381254-381280:-1:exon

TSPOAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPOAP1
product: TSPO associated protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005056375.2
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(391497..391595,392279..393320,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442749))
location: region:391497-442749:-1
so has part: feature:442611-442749:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392279-393320:-1:exon
so has part: feature:391497-391595:-1:exon

position:391497:-1
position: 391497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392279-393320:-1:exon

position:392279:-1
position: 392279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:391497-391595:-1:exon

TSPOAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPOAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peripheral-type benzodiazepine receptor-associated protein 1 isoform X8
translation: MDRTDRPPQSGADYSFLVSQNTKLLSALEDLRHRCCSLAEENSLLRRSCFPQTEEKVKHLKRKNAELAVIAKRLEERARKLQEANLKVVTAPVPLKGSSLELCKKAFAHQRAKDLTEQASALLAKDKQIEALQQECRELQAKLLAGKDDPRCLNIVEFDRLLRESQQEVLRLQRQIALKNFKECLRSSKMSSGSAMPSAAARLGPTSSCLKGASRLKEALGDPALGGRARREVEPGVQPLGPASEGHENFPPKNAITNHKSSRQIQQLEVELKKKRKKCENLEHEVRKKHKRCKELEIQLQEVQNENARLAEENLQLNEKAGWAGQVESENADLKLQVVLVTKERDSVIQTNQGLQTKLENLEQVLKHMRNVAERRQQLEVEHKEALLDLQEKQEEVRRLQQAQAEARREHEGAVQLLEARVKDLEDQCRSQTEQFSLLSQELQQFRLQTGKIDLLTSTLVTSELPLALCSSAPQPHWEKESAVPGLLPHQSTKKVHNEENDKLEPSQRGPDTTMGSPAAPTSAQKQSKKGESQSSSSKSESMQNSPKSCPTPEVDTASEMEELDVDSISLMPEPGSQGTAKLQVFLARYSYNPFDGPNENPEAELPLTAGEYIYIYGDMDEDGFFEGELMDGRRGLVPSNFVERVSDDDLMTFLPPELNDLTHSSYQEKSLVSASTSSGDKSELSIEEGSISPLAGRAEGDQEEPVSHTAVPYPRRLTLIKQLARSIVVGWEPPLLPAGCPDIQSYNIYVDEELRQNVKSGLQTKAVLEKLDLHSRAYRVSVQTVTERGRSDKLRCTFFVGQGFGVAPTMLKVRSVTATSAEVTWLPCNSNYSHGVYLNGQECDVTKPGVYWYTFHNLQPSTQYVAKLEARPMKTPWEEVPEGQEQDSAVIHFTTPLAGTPDAPLDVQVEAGPSPDILVISWLPVTIDAEGSSNGVRVTGYAVYADGQKVIEVTSPTAGSVLVDLSQLQMFQVCHEVSVRTMSQYGESVDSVPAQISSVLLRSSHCTSPVCTTVPFRVPRGGPRASLPAHSPQHAPALLLPQKSPAESSDAKLADPSSSPAGSARPLAGKASSPPHLPSPSARLAPGTSPQGPGPVGDKKCLSVPPQQAGTALPGQGTEPGPSQELGLPQPAEGTEVQMEQARTKTPELMTDSGMKLQTEACHVCSVEEAPRGPSADTEREAENHLSSEPPSSPRQAGGTQDTFPDGNTSGSSCQDFLRLSSGKEVVKEMSRVKREEEKLSEMGRRQLTLFTEHNRSSDLSDILEEEEEDELSSEALEEKKWDQRGPCSQENGEKMDLCDTDSDEEILERILELPLQKNHSKKLFSIPEVTEDEDEDEDEKGATEEKIDPQDSLETQTYHSEKTEKPSNSKEPFLKEDGNNTSKNVSAQTPQGEHGAKESKVDADHANPAFGQLACSQRKVHWNWCYQENDQKSGSGTRPSWSKKKGNNFQEKIRSRPETSRKRQSDLTEHCSRLLSNCSQMGSGLYRAPSLREELNVVSSASGKEGLDLYSRARQGTLRKKAPRAVGSGEAEPAVMATHCPSPRSLEIDIEYDSEDDQDSTCASSPESRLWPERSQSCQGDWSDCSSQSEVAHSGGRRHLTRLEMMEEQGMESAGSLSQHLRFFCREKEAPSSEEQGWELDCIES
SIO_010081: TSPOAP1
subclass of: SO_0000673
so part of: TSPOAP1
location: complement(join(391582..391595,392279..393320,396393..396569,396850..397143,399046..399612,401087..401238,401740..402555,403965..404074,405867..405976,408653..408873,409181..409364,415334..415384,416139..416243,416607..416729,417424..417513,418175..418258,419042..419149,423794..424048,427213..427389,429053..429181,430773..430880,442611..442637))
location: region:391582-442637:-1
so has part: feature:442611-442637:-1:exon
so has part: feature:430773-430880:-1:exon
so has part: feature:429053-429181:-1:exon
so has part: feature:427213-427389:-1:exon
so has part: feature:423794-424048:-1:exon
so has part: feature:419042-419149:-1:exon
so has part: feature:418175-418258:-1:exon
so has part: feature:417424-417513:-1:exon
so has part: feature:416607-416729:-1:exon
so has part: feature:416139-416243:-1:exon
so has part: feature:415334-415384:-1:exon
so has part: feature:409181-409364:-1:exon
so has part: feature:408653-408873:-1:exon
so has part: feature:405867-405976:-1:exon
so has part: feature:403965-404074:-1:exon
so has part: feature:401740-402555:-1:exon
so has part: feature:401087-401238:-1:exon
so has part: feature:399046-399612:-1:exon
so has part: feature:396850-397143:-1:exon
so has part: feature:396393-396569:-1:exon
so has part: feature:392279-393320:-1:exon
so has part: feature:391582-391595:-1:exon

XP_005056432.1
type: Protein
SIO_000068: ncbiprotein

position:391582:-1
position: 391582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442611-442637:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430773-430880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:429053-429181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427213-427389:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:423794-424048:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:419042-419149:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418175-418258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417424-417513:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416607-416729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:416139-416243:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:415334-415384:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:409181-409364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:408653-408873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:405867-405976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403965-404074:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:401740-402555:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:401087-401238:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:399046-399612:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:396850-397143:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:396393-396569:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:392279-393320:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391582-391595:-1:exon

SUPT4H1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SUPT4H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(461075..462980)
location: region:461075-462980:-1
so has part: feature:461075-462980:-1:exon
subclass of: SO_0000010

101820765
type: Gene
SIO_000068: ncbigene

position:461075:-1
position: 461075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462980:-1
position: 462980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461075-462980:-1:exon

SUPT4H1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SUPT4H1
product: SPT4 homolog, DSIF elongation factor subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016302922.1
SIO_010081: SUPT4H1
subclass of: SO_0000673
so part of: SUPT4H1
location: complement(join(461075..461464,462476..462529,462700..462755,462856..462980))
location: region:461075-462980:-1
so has part: feature:462856-462980:-1:exon
so has part: feature:462700-462755:-1:exon
so has part: feature:462476-462529:-1:exon
so has part: feature:461075-461464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462856-462980:-1:exon

position:462856:-1
position: 462856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:462700-462755:-1:exon

position:462700:-1
position: 462700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462755:-1
position: 462755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:462476-462529:-1:exon

position:462476:-1
position: 462476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462529:-1
position: 462529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:461075-461464:-1:exon

position:461464:-1
position: 461464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT4H1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SUPT4H1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor SPT4
translation: MKGNREMVYDCTSSSFDGIITMMSPEDSWVSKWQRISTFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT
SIO_010081: SUPT4H1
subclass of: SO_0000673
so part of: SUPT4H1
location: complement(join(461397..461464,462476..462529,462700..462755,462856..462908))
location: region:461397-462908:-1
so has part: feature:462856-462908:-1:exon
so has part: feature:462700-462755:-1:exon
so has part: feature:462476-462529:-1:exon
so has part: feature:461397-461464:-1:exon

XP_016158408.1
type: Protein
SIO_000068: ncbiprotein

position:461397:-1
position: 461397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462908:-1
position: 462908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462856-462908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:462700-462755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:462476-462529:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:461397-461464:-1:exon

RNF43
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RNF43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(465805..525367)
location: region:465805-525367:-1
so has part: feature:465805-525367:-1:exon
subclass of: SO_0000010

107604080
type: Gene
SIO_000068: ncbigene

position:465805:-1
position: 465805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525367:-1
position: 525367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465805-525367:-1:exon

RNF43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RNF43
product: ring finger protein 43
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303071.1
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: complement(join(465805..468480,474435..474781,474860..475303,475483..476212,476669..476771,478119..478274,478959..479060,479575..479706,481076..481150,485442..485564,525045..525367))
location: region:465805-525367:-1
so has part: feature:525045-525367:-1:exon
so has part: feature:485442-485564:-1:exon
so has part: feature:481076-481150:-1:exon
so has part: feature:479575-479706:-1:exon
so has part: feature:478959-479060:-1:exon
so has part: feature:478119-478274:-1:exon
so has part: feature:476669-476771:-1:exon
so has part: feature:475483-476212:-1:exon
so has part: feature:474860-475303:-1:exon
so has part: feature:474435-474781:-1:exon
so has part: feature:465805-468480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525045-525367:-1:exon

position:525045:-1
position: 525045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:485442-485564:-1:exon

position:485442:-1
position: 485442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485564:-1
position: 485564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:481076-481150:-1:exon

position:481076:-1
position: 481076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481150:-1
position: 481150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:479575-479706:-1:exon

position:479575:-1
position: 479575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479706:-1
position: 479706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:478959-479060:-1:exon

position:478959:-1
position: 478959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479060:-1
position: 479060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:478119-478274:-1:exon

position:478119:-1
position: 478119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478274:-1
position: 478274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:476669-476771:-1:exon

position:476669:-1
position: 476669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476771:-1
position: 476771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:475483-476212:-1:exon

position:475483:-1
position: 475483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476212:-1
position: 476212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:474860-475303:-1:exon

position:474860:-1
position: 474860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475303:-1
position: 475303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:474435-474781:-1:exon

position:474435:-1
position: 474435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474781:-1
position: 474781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:465805-468480:-1:exon

position:468480:-1
position: 468480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RNF43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF43
translation: MSAGPQVQLAVLWPWLLMATLQAGLGHTGLALAAAVESERAAAQKAIIRVIPLKVEPITLEGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANKAKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVKIEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATRRYQPRARPAPRWDSASSCSSAPLCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHTCPLCMFNILARDSGDQAMAASSRLVPQDMEPGRRLHLFRQHPGHALYHLPHAYPQRSLRSFPSEPAHGNPFFHSPELSHLDFGTIHYMPYRPATSLLACGHVAPLAPGLLGQQHPSPSACGQALAPHRTCPLQPQPPCLVPKAALAQKQHRAPTLRRGLGHGHQHNSSGSGESYLTEHSGYLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGPATDHGQEQLRPPRERRPRSLDLMVPGGAAPAKPQVLSHVHYHHHQHHHYRRDAECPPGRAGQGPGPRRSRYSGAKVAFHSARTQKRTEKSHHSQQPLESSGVLQEAAPAGQPTCPKEGREPPHSPSTSPDRLDFSVDASRQLGAAGTPPVPLPPRHSLQRRHHRRKRKCPLEPDPALLAKDSAEPGACDTHLPPGRPAGYRCSPEAQPLLPSAPLPSGSRLLWKCLVPQSSSELRKQEEGLSGRERNRSVPADFSGMGAPRHSLSVRLHCPAQQGQGSEDEVQDVHEHSV
SIO_010081: RNF43
subclass of: SO_0000673
so part of: RNF43
location: complement(join(468437..468480,474435..474781,474860..475303,475483..476212,476669..476771,478119..478274,478959..479060,479575..479706,481076..481150,485442..485564,525045..525281))
location: region:468437-525281:-1
so has part: feature:525045-525281:-1:exon
so has part: feature:485442-485564:-1:exon
so has part: feature:481076-481150:-1:exon
so has part: feature:479575-479706:-1:exon
so has part: feature:478959-479060:-1:exon
so has part: feature:478119-478274:-1:exon
so has part: feature:476669-476771:-1:exon
so has part: feature:475483-476212:-1:exon
so has part: feature:474860-475303:-1:exon
so has part: feature:474435-474781:-1:exon
so has part: feature:468437-468480:-1:exon

XP_016158557.1
type: Protein
SIO_000068: ncbiprotein

position:468437:-1
position: 468437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525281:-1
position: 525281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525045-525281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485442-485564:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481076-481150:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479575-479706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478959-479060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478119-478274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476669-476771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475483-476212:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:474860-475303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:474435-474781:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468437-468480:-1:exon

LOC101814900
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101814900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(525795..527262)
location: region:525795-527262:-1
so has part: feature:525795-527262:-1:exon
subclass of: SO_0000011

101814900
type: Gene
SIO_000068: ncbigene

position:525795:-1
position: 525795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527262:-1
position: 527262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525795-527262:-1:exon

LOC101814900
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101814900
product: uncharacterized LOC101814900
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_219213.1
SIO_010081: LOC101814900
subclass of: SO_0000673
so part of: LOC101814900
location: complement(join(525795..526607,526716..526845,527069..527262))
location: region:525795-527262:-1
so has part: feature:527069-527262:-1:exon
so has part: feature:526716-526845:-1:exon
so has part: feature:525795-526607:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527069-527262:-1:exon

position:527069:-1
position: 527069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:526716-526845:-1:exon

position:526716:-1
position: 526716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526845:-1
position: 526845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:525795-526607:-1:exon

position:526607:-1
position: 526607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTMR4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(548921..608109)
location: region:548921-608109:-1
so has part: feature:548921-608109:-1:exon
subclass of: SO_0000010

101815162
type: Gene
SIO_000068: ncbigene

position:548921:-1
position: 548921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608109:-1
position: 608109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548921-608109:-1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MTMR4
product: myotubularin related protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005056376.2
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(548921..551134,551507..551595,551848..551958,552256..553462,553808..553962,554051..554221,555006..555191,555640..555835,556264..556375,557444..557572,557812..558008,564016..564129,569625..569721,571734..571900,572090..572172,572817..572933,575551..575640,577905..578076))
location: region:548921-578076:-1
so has part: feature:577905-578076:-1:exon
so has part: feature:575551-575640:-1:exon
so has part: feature:572817-572933:-1:exon
so has part: feature:572090-572172:-1:exon
so has part: feature:571734-571900:-1:exon
so has part: feature:569625-569721:-1:exon
so has part: feature:564016-564129:-1:exon
so has part: feature:557812-558008:-1:exon
so has part: feature:557444-557572:-1:exon
so has part: feature:556264-556375:-1:exon
so has part: feature:555640-555835:-1:exon
so has part: feature:555006-555191:-1:exon
so has part: feature:554051-554221:-1:exon
so has part: feature:553808-553962:-1:exon
so has part: feature:552256-553462:-1:exon
so has part: feature:551848-551958:-1:exon
so has part: feature:551507-551595:-1:exon
so has part: feature:548921-551134:-1:exon

position:578076:-1
position: 578076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577905-578076:-1:exon

position:577905:-1
position: 577905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575551-575640:-1:exon

position:575551:-1
position: 575551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575640:-1
position: 575640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:572817-572933:-1:exon

position:572817:-1
position: 572817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572933:-1
position: 572933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:572090-572172:-1:exon

position:572090:-1
position: 572090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572172:-1
position: 572172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:571734-571900:-1:exon

position:571734:-1
position: 571734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571900:-1
position: 571900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:569625-569721:-1:exon

position:569625:-1
position: 569625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569721:-1
position: 569721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:564016-564129:-1:exon

position:564016:-1
position: 564016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564129:-1
position: 564129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557812-558008:-1:exon

position:557812:-1
position: 557812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558008:-1
position: 558008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:557444-557572:-1:exon

position:557444:-1
position: 557444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557572:-1
position: 557572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:556264-556375:-1:exon

position:556264:-1
position: 556264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556375:-1
position: 556375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:555640-555835:-1:exon

position:555640:-1
position: 555640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555835:-1
position: 555835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:555006-555191:-1:exon

position:555006:-1
position: 555006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555191:-1
position: 555191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:554051-554221:-1:exon

position:554051:-1
position: 554051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554221:-1
position: 554221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:553808-553962:-1:exon

position:553808:-1
position: 553808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553962:-1
position: 553962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:552256-553462:-1:exon

position:552256:-1
position: 552256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553462:-1
position: 553462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:551848-551958:-1:exon

position:551848:-1
position: 551848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551958:-1
position: 551958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:551507-551595:-1:exon

position:551507:-1
position: 551507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551595:-1
position: 551595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:548921-551134:-1:exon

position:551134:-1
position: 551134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MTMR4
product: myotubularin related protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005056378.2
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(550957..551134,551507..551595,551848..551958,552256..553462,553808..553962,554051..554221,555006..555191,555640..555835,556264..556375,557444..557572,557812..558008,564016..564129,569625..569721,571734..571900,572090..572172,572817..572933,575551..575640,586919..586992,607979..608109))
location: region:550957-608109:-1
so has part: feature:607979-608109:-1:exon
so has part: feature:586919-586992:-1:exon
so has part: feature:575551-575640:-1:exon
so has part: feature:572817-572933:-1:exon
so has part: feature:572090-572172:-1:exon
so has part: feature:571734-571900:-1:exon
so has part: feature:569625-569721:-1:exon
so has part: feature:564016-564129:-1:exon
so has part: feature:557812-558008:-1:exon
so has part: feature:557444-557572:-1:exon
so has part: feature:556264-556375:-1:exon
so has part: feature:555640-555835:-1:exon
so has part: feature:555006-555191:-1:exon
so has part: feature:554051-554221:-1:exon
so has part: feature:553808-553962:-1:exon
so has part: feature:552256-553462:-1:exon
so has part: feature:551848-551958:-1:exon
so has part: feature:551507-551595:-1:exon
so has part: feature:550957-551134:-1:exon

position:550957:-1
position: 550957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607979-608109:-1:exon

position:607979:-1
position: 607979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586919-586992:-1:exon

position:586919:-1
position: 586919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586992:-1
position: 586992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:575551-575640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572817-572933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572090-572172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:571734-571900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:569625-569721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564016-564129:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:557812-558008:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557444-557572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556264-556375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:555640-555835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:555006-555191:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:554051-554221:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:553808-553962:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:552256-553462:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:551848-551958:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:551507-551595:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:550957-551134:-1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MTMR4
product: myotubularin related protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005056379.2
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(550957..551134,551507..551595,551848..551958,552256..553462,553808..553962,554051..554221,555006..555191,555640..555835,556264..556375,557444..557572,557812..558008,564016..564129,569625..569721,571734..571900,572090..572172,572817..572933,575551..575640,586919..586992,603739..603804))
location: region:550957-603804:-1
so has part: feature:603739-603804:-1:exon
so has part: feature:586919-586992:-1:exon
so has part: feature:575551-575640:-1:exon
so has part: feature:572817-572933:-1:exon
so has part: feature:572090-572172:-1:exon
so has part: feature:571734-571900:-1:exon
so has part: feature:569625-569721:-1:exon
so has part: feature:564016-564129:-1:exon
so has part: feature:557812-558008:-1:exon
so has part: feature:557444-557572:-1:exon
so has part: feature:556264-556375:-1:exon
so has part: feature:555640-555835:-1:exon
so has part: feature:555006-555191:-1:exon
so has part: feature:554051-554221:-1:exon
so has part: feature:553808-553962:-1:exon
so has part: feature:552256-553462:-1:exon
so has part: feature:551848-551958:-1:exon
so has part: feature:551507-551595:-1:exon
so has part: feature:550957-551134:-1:exon

position:603804:-1
position: 603804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603739-603804:-1:exon

position:603739:-1
position: 603739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586919-586992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575551-575640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572817-572933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572090-572172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:571734-571900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:569625-569721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564016-564129:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:557812-558008:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557444-557572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556264-556375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:555640-555835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:555006-555191:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:554051-554221:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:553808-553962:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:552256-553462:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:551848-551958:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:551507-551595:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:550957-551134:-1:exon

MTMR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MTMR4
product: myotubularin related protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005056377.2
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(550957..551134,551507..551595,551848..551958,552256..553462,553808..553962,554051..554221,555006..555191,555640..555835,556264..556375,557444..557572,557812..558008,564016..564129,569625..569721,571734..571900,572090..572172,572817..572933,575551..575640,586919..586992,587417..587464))
location: region:550957-587464:-1
so has part: feature:587417-587464:-1:exon
so has part: feature:586919-586992:-1:exon
so has part: feature:575551-575640:-1:exon
so has part: feature:572817-572933:-1:exon
so has part: feature:572090-572172:-1:exon
so has part: feature:571734-571900:-1:exon
so has part: feature:569625-569721:-1:exon
so has part: feature:564016-564129:-1:exon
so has part: feature:557812-558008:-1:exon
so has part: feature:557444-557572:-1:exon
so has part: feature:556264-556375:-1:exon
so has part: feature:555640-555835:-1:exon
so has part: feature:555006-555191:-1:exon
so has part: feature:554051-554221:-1:exon
so has part: feature:553808-553962:-1:exon
so has part: feature:552256-553462:-1:exon
so has part: feature:551848-551958:-1:exon
so has part: feature:551507-551595:-1:exon
so has part: feature:550957-551134:-1:exon

position:587464:-1
position: 587464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587417-587464:-1:exon

position:587417:-1
position: 587417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586919-586992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:575551-575640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572817-572933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572090-572172:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:571734-571900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:569625-569721:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564016-564129:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:557812-558008:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:557444-557572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:556264-556375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:555640-555835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:555006-555191:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:554051-554221:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:553808-553962:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:552256-553462:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:551848-551958:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:551507-551595:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:550957-551134:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELIKEEESLQVPFTVLQGEGVEYLGLANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNAWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHARNGAVISRCSQPEISWWGWRNADDEYLVTSIAKACALNPGARASGAAPHSGSSDGSEPCDADFDSSLTACSGVENAATPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHLWTAVYLPASSPHPLGQEDMDIYMPPGSQSQDFSGRCLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEARHASTEGAEGAAVASGEAWPREKKEANPALQGSSHVEHEGQSRQLDSQAAVPASSVPVKVEKGNGTLMEELDSIGPDPNPSGQENGDKVSTSSRKHLETCPQEPLKAAGMVSNRGGCPKRITTHQDISSQESLAPGTPSQDIPGPAVGIPCPDADKGRGEAGQSMPFEDPGRPGRLLLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPNGEPTPRHLFSYGCCSKRLSSKPLRAPGLCLSGPWSGREGGKPSACSGHVSTHFGKPSRLWLPCHLKQASGPKHLLPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEASYKQEVEQLRRQVRELQLRLDIRHFCAPPAEPPMDYEDDFTCLKESDGSDTEDFCSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCATCCHLKLPIPDQQLYDPVLVCNSCYDHIQVSRARELMSQHMKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(550957..551134,551507..551595,551848..551958,552256..553462,553808..553962,554051..554221,555006..555191,555640..555835,556264..556375,557444..557572,557812..558008,564016..564129,569625..569721,571734..571900,572090..572172,572817..572933,575551..575640,586919..586921))
location: region:550957-586921:-1
so has part: feature:586919-586921:-1:exon
so has part: feature:575551-575640:-1:exon
so has part: feature:572817-572933:-1:exon
so has part: feature:572090-572172:-1:exon
so has part: feature:571734-571900:-1:exon
so has part: feature:569625-569721:-1:exon
so has part: feature:564016-564129:-1:exon
so has part: feature:557812-558008:-1:exon
so has part: feature:557444-557572:-1:exon
so has part: feature:556264-556375:-1:exon
so has part: feature:555640-555835:-1:exon
so has part: feature:555006-555191:-1:exon
so has part: feature:554051-554221:-1:exon
so has part: feature:553808-553962:-1:exon
so has part: feature:552256-553462:-1:exon
so has part: feature:551848-551958:-1:exon
so has part: feature:551507-551595:-1:exon
so has part: feature:550957-551134:-1:exon

XP_005056434.1
type: Protein
SIO_000068: ncbiprotein

position:586921:-1
position: 586921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586919-586921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575551-575640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572817-572933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572090-572172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:571734-571900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:569625-569721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564016-564129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557812-558008:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:557444-557572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556264-556375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555640-555835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:555006-555191:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:554051-554221:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553808-553962:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:552256-553462:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:551848-551958:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:551507-551595:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:550957-551134:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELIKEEESLQVPFTVLQGEGVEYLGLANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNAWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHARNGAVISRCSQPEISWWGWRNADDEYLVTSIAKACALNPGARASGAAPHSGSSDGSEPCDADFDSSLTACSGVENAATPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHLWTAVYLPASSPHPLGQEDMDIYMPPGSQSQDFSGRCLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEARHASTEGAEGAAVASGEAWPREKKEANPALQGSSHVEHEGQSRQLDSQAAVPASSVPVKVEKGNGTLMEELDSIGPDPNPSGQENGDKVSTSSRKHLETCPQEPLKAAGMVSNRGGCPKRITTHQDISSQESLAPGTPSQDIPGPAVGIPCPDADKGRGEAGQSMPFEDPGRPGRLLLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPNGEPTPRHLFSYGCCSKRLSSKPLRAPGLCLSGPWSGREGGKPSACSGHVSTHFGKPSRLWLPCHLKQASGPKHLLPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEASYKQEVEQLRRQVRELQLRLDIRHFCAPPAEPPMDYEDDFTCLKESDGSDTEDFCSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCATCCHLKLPIPDQQLYDPVLVCNSCYDHIQVSRARELMSQHMKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(550957..551134,551507..551595,551848..551958,552256..553462,553808..553962,554051..554221,555006..555191,555640..555835,556264..556375,557444..557572,557812..558008,564016..564129,569625..569721,571734..571900,572090..572172,572817..572933,575551..575640,586919..586921))
location: region:550957-586921:-1
so has part: feature:586919-586921:-1:exon
so has part: feature:575551-575640:-1:exon
so has part: feature:572817-572933:-1:exon
so has part: feature:572090-572172:-1:exon
so has part: feature:571734-571900:-1:exon
so has part: feature:569625-569721:-1:exon
so has part: feature:564016-564129:-1:exon
so has part: feature:557812-558008:-1:exon
so has part: feature:557444-557572:-1:exon
so has part: feature:556264-556375:-1:exon
so has part: feature:555640-555835:-1:exon
so has part: feature:555006-555191:-1:exon
so has part: feature:554051-554221:-1:exon
so has part: feature:553808-553962:-1:exon
so has part: feature:552256-553462:-1:exon
so has part: feature:551848-551958:-1:exon
so has part: feature:551507-551595:-1:exon
so has part: feature:550957-551134:-1:exon

XP_005056435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586919-586921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575551-575640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572817-572933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572090-572172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:571734-571900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:569625-569721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564016-564129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557812-558008:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:557444-557572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556264-556375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555640-555835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:555006-555191:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:554051-554221:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553808-553962:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:552256-553462:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:551848-551958:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:551507-551595:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:550957-551134:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X2
translation: MGEEGPPSLEYIQAKDLFPPKELIKEEESLQVPFTVLQGEGVEYLGLANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNAWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHARNGAVISRCSQPEISWWGWRNADDEYLVTSIAKACALNPGARASGAAPHSGSSDGSEPCDADFDSSLTACSGVENAATPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHLWTAVYLPASSPHPLGQEDMDIYMPPGSQSQDFSGRCLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEARHASTEGAEGAAVASGEAWPREKKEANPALQGSSHVEHEGQSRQLDSQAAVPASSVPVKVEKGNGTLMEELDSIGPDPNPSGQENGDKVSTSSRKHLETCPQEPLKAAGMVSNRGGCPKRITTHQDISSQESLAPGTPSQDIPGPAVGIPCPDADKGRGEAGQSMPFEDPGRPGRLLLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPNGEPTPRHLFSYGCCSKRLSSKPLRAPGLCLSGPWSGREGGKPSACSGHVSTHFGKPSRLWLPCHLKQASGPKHLLPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEASYKQEVEQLRRQVRELQLRLDIRHFCAPPAEPPMDYEDDFTCLKESDGSDTEDFCSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCATCCHLKLPIPDQQLYDPVLVCNSCYDHIQVSRARELMSQHMKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(550957..551134,551507..551595,551848..551958,552256..553462,553808..553962,554051..554221,555006..555191,555640..555835,556264..556375,557444..557572,557812..558008,564016..564129,569625..569721,571734..571900,572090..572172,572817..572933,575551..575640,586919..586921))
location: region:550957-586921:-1
so has part: feature:586919-586921:-1:exon
so has part: feature:575551-575640:-1:exon
so has part: feature:572817-572933:-1:exon
so has part: feature:572090-572172:-1:exon
so has part: feature:571734-571900:-1:exon
so has part: feature:569625-569721:-1:exon
so has part: feature:564016-564129:-1:exon
so has part: feature:557812-558008:-1:exon
so has part: feature:557444-557572:-1:exon
so has part: feature:556264-556375:-1:exon
so has part: feature:555640-555835:-1:exon
so has part: feature:555006-555191:-1:exon
so has part: feature:554051-554221:-1:exon
so has part: feature:553808-553962:-1:exon
so has part: feature:552256-553462:-1:exon
so has part: feature:551848-551958:-1:exon
so has part: feature:551507-551595:-1:exon
so has part: feature:550957-551134:-1:exon

XP_005056436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586919-586921:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575551-575640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572817-572933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572090-572172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:571734-571900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:569625-569721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564016-564129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557812-558008:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:557444-557572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556264-556375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555640-555835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:555006-555191:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:554051-554221:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553808-553962:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:552256-553462:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:551848-551958:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:551507-551595:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:550957-551134:-1:exon

MTMR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MTMR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 4 isoform X1
translation: MNMSLPGRVSCSMLNCFGEEGPPSLEYIQAKDLFPPKELIKEEESLQVPFTVLQGEGVEYLGLANDAVIAISNYRLHIKFKDSVINVPLRMMESVECRDMFQLHIVCKDSKVIRCHFSTFKQCQEWLKRLTRAIARPAKPEDLFAFAYHAWCLGVCVDEEDQHAHLCRPGDHVRFRFEMELVRMGFDLQNAWRVSDINNNYKLCSSYPQKLLVPVWITDKELENVASFRSWKRIPVVVYRHARNGAVISRCSQPEISWWGWRNADDEYLVTSIAKACALNPGARASGAAPHSGSSDGSEPCDADFDSSLTACSGVENAATPQKLLILDARSYTAAVANRAKGGGCECEEYYPNCEVVFMGMANIHSIRNSFQYLRAVCSQVPDPSNWLSALESTKWLQHLSVMLKAAVLVSSAVDREGRPVLVHCSDGWDRTPQIVALAKILLDPYYRTMEGFQVLVESDWLDFGHKFGDRCGHQEKVEDQNEQCPVFLQWLDAVHQLLKQFPCLFEFNEAFLVKLVQHTYSCLYGTFLGNSPCEREMHNIYKRTCSVWSLLRAGNKNFHNLLYMPGSEQVLHPVCHVRALHLWTAVYLPASSPHPLGQEDMDIYMPPGSQSQDFSGRCLDRLPKTRSMDDLLSACDSSSPLTRTSSDPNLNNHCQEVRVGLEARHASTEGAEGAAVASGEAWPREKKEANPALQGSSHVEHEGQSRQLDSQAAVPASSVPVKVEKGNGTLMEELDSIGPDPNPSGQENGDKVSTSSRKHLETCPQEPLKAAGMVSNRGGCPKRITTHQDISSQESLAPGTPSQDIPGPAVGIPCPDADKGRGEAGQSMPFEDPGRPGRLLLEQWRKPISQSQSSEFSFLGSNWDSFQGMVTSLPNGEPTPRHLFSYGCCSKRLSSKPLRAPGLCLSGPWSGREGGKPSACSGHVSTHFGKPSRLWLPCHLKQASGPKHLLPKCPSPVPPLYLDDDGLPFPTDVIQHRLRQIEASYKQEVEQLRRQVRELQLRLDIRHFCAPPAEPPMDYEDDFTCLKESDGSDTEDFCSDHSEDCLSEASWEPVDKKETEVTRWVPDHMASHCFNCDCEFWLAKRRHHCRNCGNVFCATCCHLKLPIPDQQLYDPVLVCNSCYDHIQVSRARELMSQHMKKPIATASS
SIO_010081: MTMR4
subclass of: SO_0000673
so part of: MTMR4
location: complement(join(550957..551134,551507..551595,551848..551958,552256..553462,553808..553962,554051..554221,555006..555191,555640..555835,556264..556375,557444..557572,557812..558008,564016..564129,569625..569721,571734..571900,572090..572172,572817..572933,575551..575640,577905..577955))
location: region:550957-577955:-1
so has part: feature:577905-577955:-1:exon
so has part: feature:575551-575640:-1:exon
so has part: feature:572817-572933:-1:exon
so has part: feature:572090-572172:-1:exon
so has part: feature:571734-571900:-1:exon
so has part: feature:569625-569721:-1:exon
so has part: feature:564016-564129:-1:exon
so has part: feature:557812-558008:-1:exon
so has part: feature:557444-557572:-1:exon
so has part: feature:556264-556375:-1:exon
so has part: feature:555640-555835:-1:exon
so has part: feature:555006-555191:-1:exon
so has part: feature:554051-554221:-1:exon
so has part: feature:553808-553962:-1:exon
so has part: feature:552256-553462:-1:exon
so has part: feature:551848-551958:-1:exon
so has part: feature:551507-551595:-1:exon
so has part: feature:550957-551134:-1:exon

XP_005056433.1
type: Protein
SIO_000068: ncbiprotein

position:577955:-1
position: 577955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577905-577955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575551-575640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:572817-572933:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:572090-572172:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:571734-571900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:569625-569721:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:564016-564129:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:557812-558008:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:557444-557572:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:556264-556375:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555640-555835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:555006-555191:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:554051-554221:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:553808-553962:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:552256-553462:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:551848-551958:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:551507-551595:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:550957-551134:-1:exon

LOC107604071
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 583450..587418
location: region:583450-587418:1
so has part: feature:583450-587418:1:exon
subclass of: SO_0000011

107604071
type: Gene
SIO_000068: ncbigene

position:583450:1
position: 583450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:587418:1
position: 587418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583450-587418:1:exon

LOC107604071
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107604071
product: uncharacterized LOC107604071
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001611905.1
SIO_010081: LOC107604071
subclass of: SO_0000673
so part of: LOC107604071
location: join(583450..583878,585272..585349,587172..587418)
location: region:583450-587418:1
so has part: feature:583450-583878:1:exon
so has part: feature:585272-585349:1:exon
so has part: feature:587172-587418:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:583450-583878:1:exon

position:583878:1
position: 583878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585272-585349:1:exon

position:585272:1
position: 585272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585349:1
position: 585349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:587172-587418:1:exon

position:587172:1
position: 587172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ABHD11
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ABHD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(613246..615649)
location: region:613246-615649:-1
so has part: feature:613246-615649:-1:exon
subclass of: SO_0000010

101820955
type: Gene
SIO_000068: ncbigene

position:613246:-1
position: 613246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615649:-1
position: 615649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613246-615649:-1:exon

ABHD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ABHD11
product: abhydrolase domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016302923.1
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: complement(join(613246..613919,614201..614382,614480..614650,615084..615261,615356..615649))
location: region:613246-615649:-1
so has part: feature:615356-615649:-1:exon
so has part: feature:615084-615261:-1:exon
so has part: feature:614480-614650:-1:exon
so has part: feature:614201-614382:-1:exon
so has part: feature:613246-613919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615356-615649:-1:exon

position:615356:-1
position: 615356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615084-615261:-1:exon

position:615084:-1
position: 615084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615261:-1
position: 615261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614480-614650:-1:exon

position:614480:-1
position: 614480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614650:-1
position: 614650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614201-614382:-1:exon

position:614201:-1
position: 614201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614382:-1
position: 614382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613246-613919:-1:exon

position:613919:-1
position: 613919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABHD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ABHD11
product: abhydrolase domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005056407.2
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: complement(join(613246..613919,614201..614382,614480..614650,615084..615257,615356..615648))
location: region:613246-615648:-1
so has part: feature:615356-615648:-1:exon
so has part: feature:615084-615257:-1:exon
so has part: feature:614480-614650:-1:exon
so has part: feature:614201-614382:-1:exon
so has part: feature:613246-613919:-1:exon

position:615648:-1
position: 615648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615356-615648:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615084-615257:-1:exon

position:615257:-1
position: 615257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614480-614650:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614201-614382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613246-613919:-1:exon

ABHD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ABHD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABHD11 isoform X1
translation: MCLTRAGQRGRAHFLPAPLAIPHDCLPAVQCPWPMRSWRVAGIGHPLSCSTGSLVARATSRQWPRHWCAVVAARQVLTVDARNHGSSPHSPMMTYEAMSLDVQHLLSRLGITKCILVGHSMGGKTAMTLALQRPDLVERLISVDIGPGSTAPVSEFSAYISAMKEVKVPAGLSRSAARQLADDQLQPVVKLPQLRQFLLTNLVEVEGRYVWRVNLEAISRHLADIMNFPLFHKPYPGPALFLGGSDSPYISSRDYPEIQRLFPKAEIQYIKGAGHIVHQDKFEEFITAVLSFLP
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: complement(join(613787..613919,614201..614382,614480..614650,615084..615261,615356..615576))
location: region:613787-615576:-1
so has part: feature:615356-615576:-1:exon
so has part: feature:615084-615261:-1:exon
so has part: feature:614480-614650:-1:exon
so has part: feature:614201-614382:-1:exon
so has part: feature:613787-613919:-1:exon

XP_016158409.1
type: Protein
SIO_000068: ncbiprotein

position:613787:-1
position: 613787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615576:-1
position: 615576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615356-615576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:615084-615261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614480-614650:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614201-614382:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613787-613919:-1:exon

ABHD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ABHD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ABHD11 isoform X2
translation: MMTYEAMSLDVQHLLSRLGITKCILVGHSMGGKTAMTLALQRPDLVERLISVDIGPGSTAPVSEFSAYISAMKEVKVPAGLSRSAARQLADDQLQPVVKLPQLRQFLLTNLVEVEGRYVWRVNLEAISRHLADIMNFPLFHKPYPGPALFLGGSDSPYISSRDYPEIQRLFPKAEIQYIKGAGHIVHQDKFEEFITAVLSFLP
SIO_010081: ABHD11
subclass of: SO_0000673
so part of: ABHD11
location: complement(join(613787..613919,614201..614382,614480..614650,615084..615209))
location: region:613787-615209:-1
so has part: feature:615084-615209:-1:exon
so has part: feature:614480-614650:-1:exon
so has part: feature:614201-614382:-1:exon
so has part: feature:613787-613919:-1:exon

XP_005056464.2
type: Protein
SIO_000068: ncbiprotein

position:615209:-1
position: 615209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615084-615209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:614480-614650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614201-614382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:613787-613919:-1:exon

CLDN3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CLDN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(618288..619596)
location: region:618288-619596:-1
so has part: feature:618288-619596:-1:exon
subclass of: SO_0000010

101815743
type: Gene
SIO_000068: ncbigene

position:618288:-1
position: 618288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619596:-1
position: 619596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618288-619596:-1:exon

CLDN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CLDN3
product: claudin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056380.2
SIO_010081: CLDN3
subclass of: SO_0000673
so part of: CLDN3
location: complement(618288..619596)
location: region:618288-619596:-1
so has part: feature:618288-619596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:618288-619596:-1:exon

CLDN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CLDN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-3
translation: MSMGLEIGGVALSVLGWLCSIICCALPMWKVSAFIGNNIVTAQILWEGLWMSCVVQSTGQMQCKVYDSMLALPQDLQAARALLVVSIILAVLGLMVAIVGAQCTRCVEDESTKAKITIVAGVIFLLSGIMTLIPVCWSANTIIRDFYNPLVIEAQKRELGTSLYVGWAASALLMLGGGLLCCSCPPKDDRYPTGKVAYSAPRSAVTSYDKRNYV
SIO_010081: CLDN3
subclass of: SO_0000673
so part of: CLDN3
location: complement(618323..618967)
location: region:618323-618967:-1
so has part: feature:618323-618967:-1:exon

XP_005056437.1
type: Protein
SIO_000068: ncbiprotein

position:618323:-1
position: 618323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618967:-1
position: 618967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:618323-618967:-1:exon

LOC101816138
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101816138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 623006..631760
location: region:623006-631760:1
so has part: feature:623006-631760:1:exon
subclass of: SO_0000010

101816138
type: Gene
SIO_000068: ncbigene

position:623006:1
position: 623006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631760:1
position: 631760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623006-631760:1:exon

LOC101816138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101816138
product: claudin-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005056382.1
SIO_010081: LOC101816138
subclass of: SO_0000673
so part of: LOC101816138
location: join(623006..623115,630949..631760)
location: region:623006-631760:1
so has part: feature:623006-623115:1:exon
so has part: feature:630949-631760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623006-623115:1:exon

position:623115:1
position: 623115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:630949-631760:1:exon

position:630949:1
position: 630949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101815944
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101815944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 627361..629004
location: region:627361-629004:1
so has part: feature:627361-629004:1:exon
subclass of: SO_0000010

101815944
type: Gene
SIO_000068: ncbigene

position:627361:1
position: 627361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629004:1
position: 629004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627361-629004:1:exon

LOC101815944
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101815944
product: claudin-4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005056381.2
SIO_010081: LOC101815944
subclass of: SO_0000673
so part of: LOC101815944
location: join(627361..627627,627694..628086,628128..629004)
location: region:627361-629004:1
so has part: feature:627361-627627:1:exon
so has part: feature:627694-628086:1:exon
so has part: feature:628128-629004:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:627361-627627:1:exon

position:627627:1
position: 627627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:627694-628086:1:exon

position:627694:1
position: 627694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628086:1
position: 628086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:628128-629004:1:exon

position:628128:1
position: 628128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101815944
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101815944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4
translation: MASMGMQVLGIALSVIGWLAAILCCALPMWRETAFVGNNIVVAQIIWEGLWMSCVVQSTGQMQCKVYDSLLALPQDLQAARAMVVVAIVLAILGTLLAVAGGKCTNCVEDDTAKAKVMILSGIIFVVAGILILIPISWSANSIIQDFYNPLVSDSQKRDLGSSLYVGWAASALLLLGGGILCCTCPPRGEKPYSAKFTAARSLPASNYV
SIO_010081: LOC101815944
subclass of: SO_0000673
so part of: LOC101815944
location: join(627433..627627,627694..628086,628128..628169)
location: region:627433-628169:1
so has part: feature:627433-627627:1:exon
so has part: feature:627694-628086:1:exon
so has part: feature:628128-628169:1:exon

XP_005056438.2
type: Protein
SIO_000068: ncbiprotein

position:627433:1
position: 627433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628169:1
position: 628169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627433-627627:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:627694-628086:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628128-628169:1:exon

LOC101816138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101816138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: claudin-4-like
translation: MAMMTMQMGGLMMAALGWLGSILTCALPMWKVTAFIGSNIVVAQVFWEGLWMNCVYESTGQMQCKAYDSLLELTSDLQAARALVVTSIFVAFLAFFIALSGADCTRCVDDNSTKTRISAVAGVIFIMASIMLLIPVSWSANSIVSNFYNPMVPEALKRELGAALYIGWASSALQLFGGGVLCCSGSQSQQDPYPKKYRAVKTCGPMGYAMKDYV
SIO_010081: LOC101816138
subclass of: SO_0000673
so part of: LOC101816138
location: 630958..631602
location: region:630958-631602:1
so has part: feature:630958-631602:1:exon

XP_005056439.1
type: Protein
SIO_000068: ncbiprotein

position:630958:1
position: 630958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631602:1
position: 631602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630958-631602:1:exon

WBSCR27
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: WBSCR27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(632140..635396)
location: region:632140-635396:-1
so has part: feature:632140-635396:-1:exon
subclass of: SO_0000010

101821146
type: Gene
SIO_000068: ncbigene

position:632140:-1
position: 632140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635396:-1
position: 635396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632140-635396:-1:exon

WBSCR27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WBSCR27
product: Williams Beuren syndrome chromosome region 27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303023.1
SIO_010081: WBSCR27
subclass of: SO_0000673
so part of: WBSCR27
location: complement(join(632140..633537,634024..634185,634781..634835,634981..635109,635183..635288,635321..635396))
location: region:632140-635396:-1
so has part: feature:635321-635396:-1:exon
so has part: feature:635183-635288:-1:exon
so has part: feature:634981-635109:-1:exon
so has part: feature:634781-634835:-1:exon
so has part: feature:634024-634185:-1:exon
so has part: feature:632140-633537:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:635321-635396:-1:exon

position:635321:-1
position: 635321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:635183-635288:-1:exon

position:635183:-1
position: 635183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635288:-1
position: 635288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634981-635109:-1:exon

position:634981:-1
position: 634981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635109:-1
position: 635109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:634781-634835:-1:exon

position:634781:-1
position: 634781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634835:-1
position: 634835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:634024-634185:-1:exon

position:634024:-1
position: 634024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634185:-1
position: 634185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:632140-633537:-1:exon

position:633537:-1
position: 633537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WBSCR27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WBSCR27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Williams-Beuren syndrome chromosomal region 27 protein
translation: MGLPAAVRDRVAAVHRGSALPDRLRLYDGWAARYEQDVAALEYRAPHLAAASLAFAFPAPHAEARLLDVACGTGLVARELHRRGFRCLHGVDGSAPPLSRAGTGRGEPRRVPPVTPCVLAEHYDAVTLVGALGEGQVPSTVLPELLRVTRPGGFLCLTTRSNPSNLRYKAELEAALGQLERSGAWQKLLAQEVEYWERAVTEEESTQGNGYISGVVYIYQKCPVPHLEEG
SIO_010081: WBSCR27
subclass of: SO_0000673
so part of: WBSCR27
location: complement(join(633299..633537,634024..634185,634781..634835,634981..635109,635183..635288,635321..635322))
location: region:633299-635322:-1
so has part: feature:635321-635322:-1:exon
so has part: feature:635183-635288:-1:exon
so has part: feature:634981-635109:-1:exon
so has part: feature:634781-634835:-1:exon
so has part: feature:634024-634185:-1:exon
so has part: feature:633299-633537:-1:exon

XP_016158509.1
type: Protein
SIO_000068: ncbiprotein

position:633299:-1
position: 633299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635322:-1
position: 635322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635321-635322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635183-635288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634981-635109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:634781-634835:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634024-634185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:633299-633537:-1:exon

ELN
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ELN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 743881..773268
location: region:743881-773268:1
so has part: feature:743881-773268:1:exon
subclass of: SO_0000010

101821350
type: Gene
SIO_000068: ncbigene

position:743881:1
position: 743881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773268:1
position: 773268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743881-773268:1:exon

ELN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ELN
product: elastin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_016303078.1
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: join(743881..744038,750834..750887,751338..751364,751544..751576,752960..753004,753550..753642,753993..754052,754150..754215,754298..754345,755271..755342,755544..755570,755778..755849,758424..758450,758855..758920,759179..759223,759343..759423,759514..759582,760259..760363,760447..760488,761071..761208,761292..761333,761916..762053,762137..762178,762761..762898,762982..763023,764456..764593,764677..764718,768793..768930,769014..769055,769288..769422,769504..769560,769719..769838,769924..769971,770664..770765,770956..771009,771161..771295,771534..771581,771885..771926,772131..772169,772589..773045,773222..773268)
location: region:743881-773268:1
so has part: feature:743881-744038:1:exon
so has part: feature:750834-750887:1:exon
so has part: feature:751338-751364:1:exon
so has part: feature:751544-751576:1:exon
so has part: feature:752960-753004:1:exon
so has part: feature:753550-753642:1:exon
so has part: feature:753993-754052:1:exon
so has part: feature:754150-754215:1:exon
so has part: feature:754298-754345:1:exon
so has part: feature:755271-755342:1:exon
so has part: feature:755544-755570:1:exon
so has part: feature:755778-755849:1:exon
so has part: feature:758424-758450:1:exon
so has part: feature:758855-758920:1:exon
so has part: feature:759179-759223:1:exon
so has part: feature:759343-759423:1:exon
so has part: feature:759514-759582:1:exon
so has part: feature:760259-760363:1:exon
so has part: feature:760447-760488:1:exon
so has part: feature:761071-761208:1:exon
so has part: feature:761292-761333:1:exon
so has part: feature:761916-762053:1:exon
so has part: feature:762137-762178:1:exon
so has part: feature:762761-762898:1:exon
so has part: feature:762982-763023:1:exon
so has part: feature:764456-764593:1:exon
so has part: feature:764677-764718:1:exon
so has part: feature:768793-768930:1:exon
so has part: feature:769014-769055:1:exon
so has part: feature:769288-769422:1:exon
so has part: feature:769504-769560:1:exon
so has part: feature:769719-769838:1:exon
so has part: feature:769924-769971:1:exon
so has part: feature:770664-770765:1:exon
so has part: feature:770956-771009:1:exon
so has part: feature:771161-771295:1:exon
so has part: feature:771534-771581:1:exon
so has part: feature:771885-771926:1:exon
so has part: feature:772131-772169:1:exon
so has part: feature:772589-773045:1:exon
so has part: feature:773222-773268:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743881-744038:1:exon

position:744038:1
position: 744038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:750834-750887:1:exon

position:750834:1
position: 750834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750887:1
position: 750887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751338-751364:1:exon

position:751338:1
position: 751338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751364:1
position: 751364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:751544-751576:1:exon

position:751544:1
position: 751544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751576:1
position: 751576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:752960-753004:1:exon

position:752960:1
position: 752960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753004:1
position: 753004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:753550-753642:1:exon

position:753550:1
position: 753550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753642:1
position: 753642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:753993-754052:1:exon

position:753993:1
position: 753993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754052:1
position: 754052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:754150-754215:1:exon

position:754150:1
position: 754150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754215:1
position: 754215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:754298-754345:1:exon

position:754298:1
position: 754298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754345:1
position: 754345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:755271-755342:1:exon

position:755271:1
position: 755271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755342:1
position: 755342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:755544-755570:1:exon

position:755544:1
position: 755544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755570:1
position: 755570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:755778-755849:1:exon

position:755778:1
position: 755778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755849:1
position: 755849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:758424-758450:1:exon

position:758424:1
position: 758424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758450:1
position: 758450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:758855-758920:1:exon

position:758855:1
position: 758855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758920:1
position: 758920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:759179-759223:1:exon

position:759179:1
position: 759179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759223:1
position: 759223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:759343-759423:1:exon

position:759343:1
position: 759343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759423:1
position: 759423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:759514-759582:1:exon

position:759514:1
position: 759514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759582:1
position: 759582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:760259-760363:1:exon

position:760259:1
position: 760259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760363:1
position: 760363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:760447-760488:1:exon

position:760447:1
position: 760447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760488:1
position: 760488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:761071-761208:1:exon

position:761071:1
position: 761071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761208:1
position: 761208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:761292-761333:1:exon

position:761292:1
position: 761292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761333:1
position: 761333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:761916-762053:1:exon

position:761916:1
position: 761916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762053:1
position: 762053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:762137-762178:1:exon

position:762137:1
position: 762137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762178:1
position: 762178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:762761-762898:1:exon

position:762761:1
position: 762761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:762898:1
position: 762898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:762982-763023:1:exon

position:762982:1
position: 762982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763023:1
position: 763023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:764456-764593:1:exon

position:764456:1
position: 764456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764593:1
position: 764593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:764677-764718:1:exon

position:764677:1
position: 764677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764718:1
position: 764718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:768793-768930:1:exon

position:768793:1
position: 768793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768930:1
position: 768930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:769014-769055:1:exon

position:769014:1
position: 769014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769055:1
position: 769055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:769288-769422:1:exon

position:769288:1
position: 769288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769422:1
position: 769422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:769504-769560:1:exon

position:769504:1
position: 769504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769560:1
position: 769560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:769719-769838:1:exon

position:769719:1
position: 769719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769838:1
position: 769838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:769924-769971:1:exon

position:769924:1
position: 769924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769971:1
position: 769971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:770664-770765:1:exon

position:770664:1
position: 770664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770765:1
position: 770765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:770956-771009:1:exon

position:770956:1
position: 770956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771009:1
position: 771009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:771161-771295:1:exon

position:771161:1
position: 771161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771295:1
position: 771295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:771534-771581:1:exon

position:771534:1
position: 771534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771581:1
position: 771581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:771885-771926:1:exon

position:771885:1
position: 771885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771926:1
position: 771926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:772131-772169:1:exon

position:772131:1
position: 772131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772169:1
position: 772169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:772589-773045:1:exon

position:772589:1
position: 772589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773045:1
position: 773045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:773222-773268:1:exon

position:773222:1
position: 773222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ELN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ELN
product: elastin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016303079.1
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: join(743881..744038,750834..750887,751338..751364,751544..751576,752960..753004,753550..753642,753993..754052,754150..754215,754298..754345,755271..755342,755544..755570,755778..755849,758424..758450,758855..758920,759179..759223,759343..759423,759514..759582,760259..760363,760447..760488,761071..761208,761292..761333,761916..762053,762137..762178,762761..762898,762982..763023,764456..764593,764677..764718,768793..768930,769014..769055,769288..769422,769504..769560,769719..769838,769924..769971,770664..770765,770956..771009,771161..771295,771534..771581,771885..771926,772131..772615,773004..773045,773222..773240)
location: region:743881-773240:1
so has part: feature:743881-744038:1:exon
so has part: feature:750834-750887:1:exon
so has part: feature:751338-751364:1:exon
so has part: feature:751544-751576:1:exon
so has part: feature:752960-753004:1:exon
so has part: feature:753550-753642:1:exon
so has part: feature:753993-754052:1:exon
so has part: feature:754150-754215:1:exon
so has part: feature:754298-754345:1:exon
so has part: feature:755271-755342:1:exon
so has part: feature:755544-755570:1:exon
so has part: feature:755778-755849:1:exon
so has part: feature:758424-758450:1:exon
so has part: feature:758855-758920:1:exon
so has part: feature:759179-759223:1:exon
so has part: feature:759343-759423:1:exon
so has part: feature:759514-759582:1:exon
so has part: feature:760259-760363:1:exon
so has part: feature:760447-760488:1:exon
so has part: feature:761071-761208:1:exon
so has part: feature:761292-761333:1:exon
so has part: feature:761916-762053:1:exon
so has part: feature:762137-762178:1:exon
so has part: feature:762761-762898:1:exon
so has part: feature:762982-763023:1:exon
so has part: feature:764456-764593:1:exon
so has part: feature:764677-764718:1:exon
so has part: feature:768793-768930:1:exon
so has part: feature:769014-769055:1:exon
so has part: feature:769288-769422:1:exon
so has part: feature:769504-769560:1:exon
so has part: feature:769719-769838:1:exon
so has part: feature:769924-769971:1:exon
so has part: feature:770664-770765:1:exon
so has part: feature:770956-771009:1:exon
so has part: feature:771161-771295:1:exon
so has part: feature:771534-771581:1:exon
so has part: feature:771885-771926:1:exon
so has part: feature:772131-772615:1:exon
so has part: feature:773004-773045:1:exon
so has part: feature:773222-773240:1:exon

position:773240:1
position: 773240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743881-744038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750834-750887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751338-751364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751544-751576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:752960-753004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:753550-753642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753993-754052:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754150-754215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754298-754345:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:755271-755342:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755544-755570:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:755778-755849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:758424-758450:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:758855-758920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:759179-759223:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:759343-759423:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759514-759582:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760259-760363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:760447-760488:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761071-761208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761292-761333:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:761916-762053:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:762137-762178:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:762761-762898:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:762982-763023:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:764456-764593:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:764677-764718:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:768793-768930:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:769014-769055:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:769288-769422:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:769504-769560:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:769719-769838:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:769924-769971:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:770664-770765:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:770956-771009:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:771161-771295:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:771534-771581:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:771885-771926:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:772131-772615:1:exon

position:772615:1
position: 772615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:773004-773045:1:exon

position:773004:1
position: 773004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:773222-773240:1:exon

ELN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ELN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elastin isoform X1
translation: MARQAAAPLLPGVLLLLSILPATQQGGVPGAIPGGGVPGGGFFPGAGIGGLGAGLGAAGKPPKPGVGGLGGLGPLGLQPGAAGLFPGAAFPGGAFPGAASAAALKAAAKAGAGIGGVGGIGGPGGLGVSTGAVVPGAVQPGLGAAGKPPKIPGAGIPGAFPGGVLPGAGVRFPGVGVLPGVPTGAGVKPKAPGVGAFGGIPGLGGFGGQQPGVPLGYPIKAPKLPGGYGLPYTNGLRPGGIGAGLLAGKAGYPTGTGVGAQAAAAKAAAKLGAGVLPGVGGIPGVAPGVGVGGVPGVGVGGPAAAAAAAAAAKAAAKAGAFGPGAVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGIAGVPGVPGVPGVPGVPGVPGVPGVPGVPGVPGAVPGVGVGGPAAAAAAKAAAKAAAIGAGRVPGVGVPGVGVPGVGVPGVGVPGVGVPGLVPGVGVPGGPAAAAKAAAKAAKYGAGGLAPGVGGLVPGVGGLVPGVGGLVPGVGGVPGVGGPAAAAKAAAKAAKFGAGVGGVPGVVPGVGGVPGVTPGVGGVPGLVPGVGVPGTGILPGAGIPQVGVQPGAKPPKFGVPGVGVPGVGGLPGGLGVGGLGVGGLGAAGKPPKPGKGQPEGPEE
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: join(743960..744038,750834..750887,751338..751364,751544..751576,752960..753004,753550..753642,753993..754052,754150..754215,754298..754345,755271..755342,755544..755570,755778..755849,758424..758450,758855..758920,759179..759223,759343..759423,759514..759582,760259..760363,760447..760488,761071..761208,761292..761333,761916..762053,762137..762178,762761..762898,762982..763023,764456..764593,764677..764718,768793..768930,769014..769055,769288..769422,769504..769560,769719..769838,769924..769971,770664..770765,770956..771009,771161..771295,771534..771581,771885..771926,772131..772169,772589..772647)
location: region:743960-772647:1
so has part: feature:743960-744038:1:exon
so has part: feature:750834-750887:1:exon
so has part: feature:751338-751364:1:exon
so has part: feature:751544-751576:1:exon
so has part: feature:752960-753004:1:exon
so has part: feature:753550-753642:1:exon
so has part: feature:753993-754052:1:exon
so has part: feature:754150-754215:1:exon
so has part: feature:754298-754345:1:exon
so has part: feature:755271-755342:1:exon
so has part: feature:755544-755570:1:exon
so has part: feature:755778-755849:1:exon
so has part: feature:758424-758450:1:exon
so has part: feature:758855-758920:1:exon
so has part: feature:759179-759223:1:exon
so has part: feature:759343-759423:1:exon
so has part: feature:759514-759582:1:exon
so has part: feature:760259-760363:1:exon
so has part: feature:760447-760488:1:exon
so has part: feature:761071-761208:1:exon
so has part: feature:761292-761333:1:exon
so has part: feature:761916-762053:1:exon
so has part: feature:762137-762178:1:exon
so has part: feature:762761-762898:1:exon
so has part: feature:762982-763023:1:exon
so has part: feature:764456-764593:1:exon
so has part: feature:764677-764718:1:exon
so has part: feature:768793-768930:1:exon
so has part: feature:769014-769055:1:exon
so has part: feature:769288-769422:1:exon
so has part: feature:769504-769560:1:exon
so has part: feature:769719-769838:1:exon
so has part: feature:769924-769971:1:exon
so has part: feature:770664-770765:1:exon
so has part: feature:770956-771009:1:exon
so has part: feature:771161-771295:1:exon
so has part: feature:771534-771581:1:exon
so has part: feature:771885-771926:1:exon
so has part: feature:772131-772169:1:exon
so has part: feature:772589-772647:1:exon

XP_016158564.1
type: Protein
SIO_000068: ncbiprotein

position:743960:1
position: 743960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772647:1
position: 772647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743960-744038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750834-750887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751338-751364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751544-751576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:752960-753004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:753550-753642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753993-754052:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754150-754215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754298-754345:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:755271-755342:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755544-755570:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:755778-755849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:758424-758450:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:758855-758920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:759179-759223:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:759343-759423:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759514-759582:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760259-760363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:760447-760488:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761071-761208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761292-761333:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:761916-762053:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:762137-762178:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:762761-762898:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:762982-763023:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:764456-764593:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:764677-764718:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:768793-768930:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:769014-769055:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:769288-769422:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:769504-769560:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:769719-769838:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:769924-769971:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:770664-770765:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:770956-771009:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:771161-771295:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:771534-771581:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:771885-771926:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:772131-772169:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:772589-772647:1:exon

ELN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ELN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elastin isoform X2
translation: MARQAAAPLLPGVLLLLSILPATQQGGVPGAIPGGGVPGGGFFPGAGIGGLGAGLGAAGKPPKPGVGGLGGLGPLGLQPGAAGLFPGAAFPGGAFPGAASAAALKAAAKAGAGIGGVGGIGGPGGLGVSTGAVVPGAVQPGLGAAGKPPKIPGAGIPGAFPGGVLPGAGVRFPGVGVLPGVPTGAGVKPKAPGVGAFGGIPGLGGFGGQQPGVPLGYPIKAPKLPGGYGLPYTNGLRPGGIGAGLLAGKAGYPTGTGVGAQAAAAKAAAKLGAGVLPGVGGIPGVAPGVGVGGVPGVGVGGPAAAAAAAAAAKAAAKAGAFGPGAVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGVGVGGVPGLVPGVGGVPGLVPGVGGVPGAVPGVGGVPGVAGVPSAAAAAKAAKYGAGVPGIAGVPGVPGVPGVPGVPGVPGVPGVPGVPGVPGAVPGVGVGGPAAAAAAKAAAKAAAIGAGRVPGVGVPGVGVPGVGVPGVGVPGVGVPGLVPGVGVPGGPAAAAKAAAKAAKYGAGGLAPGVGGLVPGVGGLVPGVGGLVPGVGGVPGVGGPAAAAKAAAKAAKFGAGVGGVPGVVPGVGGVPGVTPGVGGVPGLVPGVGVPGTGILPGAGIPQVGVQPGAKPPKFGVPGVGVPGVGGLPGGLGVGGLGVGGLGE
SIO_010081: ELN
subclass of: SO_0000673
so part of: ELN
location: join(743960..744038,750834..750887,751338..751364,751544..751576,752960..753004,753550..753642,753993..754052,754150..754215,754298..754345,755271..755342,755544..755570,755778..755849,758424..758450,758855..758920,759179..759223,759343..759423,759514..759582,760259..760363,760447..760488,761071..761208,761292..761333,761916..762053,762137..762178,762761..762898,762982..763023,764456..764593,764677..764718,768793..768930,769014..769055,769288..769422,769504..769560,769719..769838,769924..769971,770664..770765,770956..771009,771161..771295,771534..771581,771885..771926,772131..772177)
location: region:743960-772177:1
so has part: feature:743960-744038:1:exon
so has part: feature:750834-750887:1:exon
so has part: feature:751338-751364:1:exon
so has part: feature:751544-751576:1:exon
so has part: feature:752960-753004:1:exon
so has part: feature:753550-753642:1:exon
so has part: feature:753993-754052:1:exon
so has part: feature:754150-754215:1:exon
so has part: feature:754298-754345:1:exon
so has part: feature:755271-755342:1:exon
so has part: feature:755544-755570:1:exon
so has part: feature:755778-755849:1:exon
so has part: feature:758424-758450:1:exon
so has part: feature:758855-758920:1:exon
so has part: feature:759179-759223:1:exon
so has part: feature:759343-759423:1:exon
so has part: feature:759514-759582:1:exon
so has part: feature:760259-760363:1:exon
so has part: feature:760447-760488:1:exon
so has part: feature:761071-761208:1:exon
so has part: feature:761292-761333:1:exon
so has part: feature:761916-762053:1:exon
so has part: feature:762137-762178:1:exon
so has part: feature:762761-762898:1:exon
so has part: feature:762982-763023:1:exon
so has part: feature:764456-764593:1:exon
so has part: feature:764677-764718:1:exon
so has part: feature:768793-768930:1:exon
so has part: feature:769014-769055:1:exon
so has part: feature:769288-769422:1:exon
so has part: feature:769504-769560:1:exon
so has part: feature:769719-769838:1:exon
so has part: feature:769924-769971:1:exon
so has part: feature:770664-770765:1:exon
so has part: feature:770956-771009:1:exon
so has part: feature:771161-771295:1:exon
so has part: feature:771534-771581:1:exon
so has part: feature:771885-771926:1:exon
so has part: feature:772131-772177:1:exon

XP_016158565.1
type: Protein
SIO_000068: ncbiprotein

position:772177:1
position: 772177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743960-744038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750834-750887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751338-751364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751544-751576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:752960-753004:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:753550-753642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753993-754052:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754150-754215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754298-754345:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:755271-755342:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755544-755570:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:755778-755849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:758424-758450:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:758855-758920:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:759179-759223:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:759343-759423:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759514-759582:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760259-760363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:760447-760488:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761071-761208:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761292-761333:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:761916-762053:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:762137-762178:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:762761-762898:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:762982-763023:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:764456-764593:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:764677-764718:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:768793-768930:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:769014-769055:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:769288-769422:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:769504-769560:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:769719-769838:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:769924-769971:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:770664-770765:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:770956-771009:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:771161-771295:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:771534-771581:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:771885-771926:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:772131-772177:1:exon

LIMK1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 777176..796550
location: region:777176-796550:1
so has part: feature:777176-796550:1:exon
subclass of: SO_0000010

101821749
type: Gene
SIO_000068: ncbigene

position:777176:1
position: 777176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796550:1
position: 796550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777176-796550:1:exon

LIMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LIMK1
product: LIM domain kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056411.1
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(777176..777290,778971..779097,782674..782812,783227..783336,785623..785814,786209..786314,786396..786580,786652..786835,786919..787005,787211..787342,787452..787511,787610..787675,787772..787928,788032..788087,788552..788577,788642..788773,788866..788949,796466..796550)
location: region:777176-796550:1
so has part: feature:777176-777290:1:exon
so has part: feature:778971-779097:1:exon
so has part: feature:782674-782812:1:exon
so has part: feature:783227-783336:1:exon
so has part: feature:785623-785814:1:exon
so has part: feature:786209-786314:1:exon
so has part: feature:786396-786580:1:exon
so has part: feature:786652-786835:1:exon
so has part: feature:786919-787005:1:exon
so has part: feature:787211-787342:1:exon
so has part: feature:787452-787511:1:exon
so has part: feature:787610-787675:1:exon
so has part: feature:787772-787928:1:exon
so has part: feature:788032-788087:1:exon
so has part: feature:788552-788577:1:exon
so has part: feature:788642-788773:1:exon
so has part: feature:788866-788949:1:exon
so has part: feature:796466-796550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777176-777290:1:exon

position:777290:1
position: 777290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778971-779097:1:exon

position:778971:1
position: 778971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779097:1
position: 779097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:782674-782812:1:exon

position:782674:1
position: 782674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782812:1
position: 782812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:783227-783336:1:exon

position:783227:1
position: 783227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783336:1
position: 783336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:785623-785814:1:exon

position:785623:1
position: 785623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785814:1
position: 785814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:786209-786314:1:exon

position:786209:1
position: 786209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786314:1
position: 786314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:786396-786580:1:exon

position:786396:1
position: 786396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786580:1
position: 786580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:786652-786835:1:exon

position:786652:1
position: 786652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786835:1
position: 786835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:786919-787005:1:exon

position:786919:1
position: 786919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787005:1
position: 787005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:787211-787342:1:exon

position:787211:1
position: 787211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787342:1
position: 787342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:787452-787511:1:exon

position:787452:1
position: 787452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787511:1
position: 787511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:787610-787675:1:exon

position:787610:1
position: 787610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787675:1
position: 787675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:787772-787928:1:exon

position:787772:1
position: 787772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787928:1
position: 787928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:788032-788087:1:exon

position:788032:1
position: 788032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788087:1
position: 788087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:788552-788577:1:exon

position:788552:1
position: 788552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788577:1
position: 788577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:788642-788773:1:exon

position:788642:1
position: 788642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788773:1
position: 788773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:788866-788949:1:exon

position:788866:1
position: 788866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788949:1
position: 788949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:796466-796550:1:exon

position:796466:1
position: 796466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LIMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain kinase 1
translation: MSPCTPYPAHVTPCIPLYVASLAPPAPPSNLHPPHIPKSLSPGVVLPAGTQLPVCASCGQGIFDGQYLQALKADWHADCFRCCDCGASLSHQYYEKDGRLYCKKDYWARFGELCHGCSEQITKGLVMVAGEQKYHPECFSCLNCRAFIGDGDTYALVERSKLYCGHCYYQMVVTPVIEQILPDSPASRIPHTVTLVSIPACSDGKRGFSVSIDQGCGTEHPRTVRVREVDPDCISPDMKNSIHVGDRILEINGTPIGHVPLDEIDLLIQETSRLLQLTIEHDPHEPLGREPGPAGSPLPALCSPLCSPAPAPCGDPAAARQRAVTRSCSTDKSPGSGSAGSPASQRKDIGRSESLRVVSRAHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKEKRLNFITEYIKGGTLRSLIKSMDSHYPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVDEKNQPEHLKNLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDIFSFGIVLCEIIGRVSADPXYLPRTTDFGLNVRGFLERYCPPACPPSFFPIAVCCCDLDPEKRPSFAKLEQWLETLRMHLEIHLPLSSQLDRPRRDAGRVESLPGPPEYRVEVATSAF
SIO_010081: LIMK1
subclass of: SO_0000673
so part of: LIMK1
location: join(777176..777290,778971..779097,782674..782812,783227..783336,785623..785814,786209..786314,786396..786580,786652..786835,786919..787005,787211..787342,787452..787511,787610..787675,787772..787928,788032..788087,788552..788577,788642..788773,788866..788949,796466..796550)
location: region:777176-796550:1
so has part: feature:777176-777290:1:exon
so has part: feature:778971-779097:1:exon
so has part: feature:782674-782812:1:exon
so has part: feature:783227-783336:1:exon
so has part: feature:785623-785814:1:exon
so has part: feature:786209-786314:1:exon
so has part: feature:786396-786580:1:exon
so has part: feature:786652-786835:1:exon
so has part: feature:786919-787005:1:exon
so has part: feature:787211-787342:1:exon
so has part: feature:787452-787511:1:exon
so has part: feature:787610-787675:1:exon
so has part: feature:787772-787928:1:exon
so has part: feature:788032-788087:1:exon
so has part: feature:788552-788577:1:exon
so has part: feature:788642-788773:1:exon
so has part: feature:788866-788949:1:exon
so has part: feature:796466-796550:1:exon

XP_005056468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:777176-777290:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778971-779097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782674-782812:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:783227-783336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785623-785814:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786209-786314:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:786396-786580:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:786652-786835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:786919-787005:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:787211-787342:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:787452-787511:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:787610-787675:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:787772-787928:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:788032-788087:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:788552-788577:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:788642-788773:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:788866-788949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:796466-796550:1:exon

SEPT4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SEPT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 801590..818007
location: region:801590-818007:1
so has part: feature:801590-818007:1:exon
subclass of: SO_0000010

101821939
type: Gene
SIO_000068: ncbigene

position:801590:1
position: 801590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818007:1
position: 818007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801590-818007:1:exon

SEPT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SEPT4
product: septin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016302876.1
SIO_010081: SEPT4
subclass of: SO_0000673
so part of: SEPT4
location: join(801590..801679,803503..803755,804084..804151,804437..804530,804639..804725,805530..805653,805862..805996,806079..806196,806514..806615,806992..807088,807166..807328,809492..809591,817900..818007)
location: region:801590-818007:1
so has part: feature:801590-801679:1:exon
so has part: feature:803503-803755:1:exon
so has part: feature:804084-804151:1:exon
so has part: feature:804437-804530:1:exon
so has part: feature:804639-804725:1:exon
so has part: feature:805530-805653:1:exon
so has part: feature:805862-805996:1:exon
so has part: feature:806079-806196:1:exon
so has part: feature:806514-806615:1:exon
so has part: feature:806992-807088:1:exon
so has part: feature:807166-807328:1:exon
so has part: feature:809492-809591:1:exon
so has part: feature:817900-818007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:801590-801679:1:exon

position:801679:1
position: 801679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803503-803755:1:exon

position:803503:1
position: 803503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803755:1
position: 803755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:804084-804151:1:exon

position:804084:1
position: 804084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804151:1
position: 804151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:804437-804530:1:exon

position:804437:1
position: 804437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804530:1
position: 804530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:804639-804725:1:exon

position:804639:1
position: 804639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804725:1
position: 804725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:805530-805653:1:exon

position:805530:1
position: 805530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805653:1
position: 805653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:805862-805996:1:exon

position:805862:1
position: 805862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805996:1
position: 805996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:806079-806196:1:exon

position:806079:1
position: 806079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806196:1
position: 806196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:806514-806615:1:exon

position:806514:1
position: 806514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806615:1
position: 806615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:806992-807088:1:exon

position:806992:1
position: 806992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807088:1
position: 807088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:807166-807328:1:exon

position:807166:1
position: 807166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807328:1
position: 807328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:809492-809591:1:exon

position:809492:1
position: 809492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809591:1
position: 809591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:817900-818007:1:exon

position:817900:1
position: 817900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEPT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SEPT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-4
translation: MATCPELQHGQEIKRFLKEDSDEAELTQFLRDCPPADGSRKVEAPESRREPGHPLGGVARVPPDEASDERDARIFSRSRPSDFQQHIAAPPPPSPNPPPPSPNRPRSPWGQLDPYDSSEDDKEYVGFATLPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDMYRDRKLLNAEERITQTVEITKHVVDIEEKGVKLRLTIVDTPGFGDAVNNTECWKPVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCIYFISPFGHGLRPLDVEFMRALHQRVNIVPVLAKADTLTPAEVERMKNKIREEIDHYGIRIYQFPECDSDEDEEFKLQDQALKESIPFAVIGSNTVVEAKGRRVRGRLYPWGIVEVENPSHCDFVKLRTMLVRTHMQDLKDVTRETHYENYRTQCIQSMTRMVVKERNRNKLTRESGTDFPIPVIPPVPDVETEKLIREKDEEEQRPARGCAPRQEQRLALRSLAILALLPRLTPGRS
SIO_010081: SEPT4
subclass of: SO_0000673
so part of: SEPT4
location: join(801644..801679,803503..803755,804084..804151,804437..804530,804639..804725,805530..805653,805862..805996,806079..806196,806514..806615,806992..807088,807166..807328,809492..809591,817900..818007)
location: region:801644-818007:1
so has part: feature:801644-801679:1:exon
so has part: feature:803503-803755:1:exon
so has part: feature:804084-804151:1:exon
so has part: feature:804437-804530:1:exon
so has part: feature:804639-804725:1:exon
so has part: feature:805530-805653:1:exon
so has part: feature:805862-805996:1:exon
so has part: feature:806079-806196:1:exon
so has part: feature:806514-806615:1:exon
so has part: feature:806992-807088:1:exon
so has part: feature:807166-807328:1:exon
so has part: feature:809492-809591:1:exon
so has part: feature:817900-818007:1:exon

XP_016158362.1
type: Protein
SIO_000068: ncbiprotein

position:801644:1
position: 801644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801644-801679:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:803503-803755:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:804084-804151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804437-804530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:804639-804725:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805530-805653:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805862-805996:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:806079-806196:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806514-806615:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806992-807088:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:807166-807328:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:809492-809591:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:817900-818007:1:exon

CCDC183
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CCDC183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(818489..823858)
location: region:818489-823858:-1
so has part: feature:818489-823858:-1:exon
subclass of: SO_0000010

101816321
type: Gene
SIO_000068: ncbigene

position:818489:-1
position: 818489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823858:-1
position: 823858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818489-823858:-1:exon

CCDC183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CCDC183
product: coiled-coil domain containing 183, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005056384.1
SIO_010081: CCDC183
subclass of: SO_0000673
so part of: CCDC183
location: complement(join(818489..818688,819318..819414,819595..819711,819821..819980,820309..820469,820714..820814,820897..820954,821170..821298,821918..822025,822166..822270,822378..822545,823267..823338,823484..823605,823693..823858))
location: region:818489-823858:-1
so has part: feature:823693-823858:-1:exon
so has part: feature:823484-823605:-1:exon
so has part: feature:823267-823338:-1:exon
so has part: feature:822378-822545:-1:exon
so has part: feature:822166-822270:-1:exon
so has part: feature:821918-822025:-1:exon
so has part: feature:821170-821298:-1:exon
so has part: feature:820897-820954:-1:exon
so has part: feature:820714-820814:-1:exon
so has part: feature:820309-820469:-1:exon
so has part: feature:819821-819980:-1:exon
so has part: feature:819595-819711:-1:exon
so has part: feature:819318-819414:-1:exon
so has part: feature:818489-818688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823693-823858:-1:exon

position:823693:-1
position: 823693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:823484-823605:-1:exon

position:823484:-1
position: 823484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823605:-1
position: 823605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823267-823338:-1:exon

position:823267:-1
position: 823267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823338:-1
position: 823338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:822378-822545:-1:exon

position:822378:-1
position: 822378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822545:-1
position: 822545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:822166-822270:-1:exon

position:822166:-1
position: 822166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822270:-1
position: 822270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:821918-822025:-1:exon

position:821918:-1
position: 821918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822025:-1
position: 822025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:821170-821298:-1:exon

position:821170:-1
position: 821170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821298:-1
position: 821298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:820897-820954:-1:exon

position:820897:-1
position: 820897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820954:-1
position: 820954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:820714-820814:-1:exon

position:820714:-1
position: 820714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820814:-1
position: 820814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:820309-820469:-1:exon

position:820309:-1
position: 820309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820469:-1
position: 820469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:819821-819980:-1:exon

position:819821:-1
position: 819821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819980:-1
position: 819980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:819595-819711:-1:exon

position:819595:-1
position: 819595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819711:-1
position: 819711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:819318-819414:-1:exon

position:819318:-1
position: 819318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819414:-1
position: 819414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:818489-818688:-1:exon

position:818688:-1
position: 818688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CCDC183
product: coiled-coil domain containing 183, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005056383.1
SIO_010081: CCDC183
subclass of: SO_0000673
so part of: CCDC183
location: complement(join(818489..818688,819318..819414,819595..819714,819821..819980,820309..820469,820714..820814,820897..820954,821170..821298,821918..822025,822166..822270,822378..822545,823267..823338,823484..823605,823693..823858))
location: region:818489-823858:-1
so has part: feature:823693-823858:-1:exon
so has part: feature:823484-823605:-1:exon
so has part: feature:823267-823338:-1:exon
so has part: feature:822378-822545:-1:exon
so has part: feature:822166-822270:-1:exon
so has part: feature:821918-822025:-1:exon
so has part: feature:821170-821298:-1:exon
so has part: feature:820897-820954:-1:exon
so has part: feature:820714-820814:-1:exon
so has part: feature:820309-820469:-1:exon
so has part: feature:819821-819980:-1:exon
so has part: feature:819595-819714:-1:exon
so has part: feature:819318-819414:-1:exon
so has part: feature:818489-818688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823693-823858:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823484-823605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823267-823338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822378-822545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822166-822270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821918-822025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821170-821298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820897-820954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820714-820814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820309-820469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819821-819980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819595-819714:-1:exon

position:819714:-1
position: 819714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:819318-819414:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818489-818688:-1:exon

CCDC183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CCDC183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 183 isoform X2
translation: MVGPGMEAPGSERGPKAKLSQRSQELRALVGLQEQGGKVFAQSCEEKLRQNRELLPSLQAALQEDSSVLKFVLKYNKLPIKDAFGEGQELFSATESLEVVIKKIEAKVHEQVKVCDMLLHQLRQWSQARDERQRHLQELQEAEVDPKWQEPQLQTIRQLGNDIEKMLMKIHSGEMVTNLYLRLQEVLRRELVYLPRYLDLLCGMTVMYHEELRARSSLKANNAIKKLMAEAGPQVRAEKQLRDQSLAEQRKHIESLRRQEESERQQRQQAVSMLSEEQDLSSSDVLVGADVEAAKAKMQREAFVTDKMEKAKSALQCSRLWDIPSSIEAQRRSLGSLQQHIDECKERKTELKKTLEELELQQAKLKFNEPVSTTRLREEELRQNLQQEEARLEQMRAQMSKSQKRLIEFENIIDNLYLLLQGILIPGQDSAAVVGLEEKLQECEKKLQFLKERLAARPEDSTDEHGETFAKVRTLLEKRTAEETRNLKISFEDEEAMEDDTLDFEDEDHDYIPSREDIKKQGLQLIRMNTRRRKKKQ
SIO_010081: CCDC183
subclass of: SO_0000673
so part of: CCDC183
location: complement(join(818573..818688,819318..819414,819595..819711,819821..819980,820309..820469,820714..820814,820897..820954,821170..821298,821918..822025,822166..822270,822378..822545,823267..823338,823484..823605,823693..823792))
location: region:818573-823792:-1
so has part: feature:823693-823792:-1:exon
so has part: feature:823484-823605:-1:exon
so has part: feature:823267-823338:-1:exon
so has part: feature:822378-822545:-1:exon
so has part: feature:822166-822270:-1:exon
so has part: feature:821918-822025:-1:exon
so has part: feature:821170-821298:-1:exon
so has part: feature:820897-820954:-1:exon
so has part: feature:820714-820814:-1:exon
so has part: feature:820309-820469:-1:exon
so has part: feature:819821-819980:-1:exon
so has part: feature:819595-819711:-1:exon
so has part: feature:819318-819414:-1:exon
so has part: feature:818573-818688:-1:exon

XP_005056441.1
type: Protein
SIO_000068: ncbiprotein

position:818573:-1
position: 818573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823792:-1
position: 823792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823693-823792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823484-823605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823267-823338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822378-822545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822166-822270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821918-822025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821170-821298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820897-820954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820714-820814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820309-820469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819821-819980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819595-819711:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819318-819414:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818573-818688:-1:exon

CCDC183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CCDC183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 183 isoform X1
translation: MVGPGMEAPGSERGPKAKLSQRSQELRALVGLQEQGGKVFAQSCEEKLRQNRELLPSLQAALQEDSSVLKFVLKYNKLPIKDAFGEGQELFSATESLEVVIKKIEAKVHEQVKVCDMLLHQLRQWSQARDERQRHLQELQEAEVDPKWQEPQLQTIRQLGNDIEKMLMKIHSGEMVTNLYLRLQEVLRRELVYLPRYLDLLCGMTVMYHEELRARSSLKANNAIKKLMAEAGPQVRAEKQLRDQSLAEQRKHIESLRRQEESERQQRQQAVSMLSEEQDLSSSDVLVGADVEAAKAKMQREAFVTDKMEKAKSALQCSRLWDIPSSIEAQRRSLGSLQQHIDECKERKTELKKTLEELELQQAKLKFNEPVSTTRLREEELRQNLQQEEARLEQMRAQMSKSQKRLIEFENIIDNLYLLLQGILIPGQQDSAAVVGLEEKLQECEKKLQFLKERLAARPEDSTDEHGETFAKVRTLLEKRTAEETRNLKISFEDEEAMEDDTLDFEDEDHDYIPSREDIKKQGLQLIRMNTRRRKKKQ
SIO_010081: CCDC183
subclass of: SO_0000673
so part of: CCDC183
location: complement(join(818573..818688,819318..819414,819595..819714,819821..819980,820309..820469,820714..820814,820897..820954,821170..821298,821918..822025,822166..822270,822378..822545,823267..823338,823484..823605,823693..823792))
location: region:818573-823792:-1
so has part: feature:823693-823792:-1:exon
so has part: feature:823484-823605:-1:exon
so has part: feature:823267-823338:-1:exon
so has part: feature:822378-822545:-1:exon
so has part: feature:822166-822270:-1:exon
so has part: feature:821918-822025:-1:exon
so has part: feature:821170-821298:-1:exon
so has part: feature:820897-820954:-1:exon
so has part: feature:820714-820814:-1:exon
so has part: feature:820309-820469:-1:exon
so has part: feature:819821-819980:-1:exon
so has part: feature:819595-819714:-1:exon
so has part: feature:819318-819414:-1:exon
so has part: feature:818573-818688:-1:exon

XP_005056440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:823693-823792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823484-823605:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823267-823338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822378-822545:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822166-822270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821918-822025:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821170-821298:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:820897-820954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820714-820814:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820309-820469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819821-819980:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819595-819714:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819318-819414:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:818573-818688:-1:exon

SBDS
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SBDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(824308..830672)
location: region:824308-830672:-1
so has part: feature:824308-830672:-1:exon
subclass of: SO_0000010

101816667
type: Gene
SIO_000068: ncbigene

position:824308:-1
position: 824308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830672:-1
position: 830672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824308-830672:-1:exon

SBDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SBDS
product: SBDS ribosome assembly guanine nucleotide exchange factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005056385.1
SIO_010081: SBDS
subclass of: SO_0000673
so part of: SBDS
location: complement(join(824308..826587,827205..827369,827912..828112,829310..829439,830537..830672))
location: region:824308-830672:-1
so has part: feature:830537-830672:-1:exon
so has part: feature:829310-829439:-1:exon
so has part: feature:827912-828112:-1:exon
so has part: feature:827205-827369:-1:exon
so has part: feature:824308-826587:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:830537-830672:-1:exon

position:830537:-1
position: 830537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829310-829439:-1:exon

position:829310:-1
position: 829310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829439:-1
position: 829439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:827912-828112:-1:exon

position:827912:-1
position: 827912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828112:-1
position: 828112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:827205-827369:-1:exon

position:827205:-1
position: 827205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827369:-1
position: 827369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:824308-826587:-1:exon

position:826587:-1
position: 826587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SBDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SBDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome maturation protein SBDS
translation: MSIFTPTNQIRLTNVAVVRARRAGKRFEIACYRNKVMGWRSGAEKDLDEVLQTHTVFVNVSKGQVAKKEDLVKAFGTDDQTEICKMILSKGELQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIRQLKETMQIERAHMRLRFILPAKEGKKLKEKLKPLIKVTESEDFQEELEMVCLIDPGCFREIDELIRCETKGKGSLEVLSLKDVEEGDEKLE
SIO_010081: SBDS
subclass of: SO_0000673
so part of: SBDS
location: complement(join(826459..826587,827205..827369,827912..828112,829310..829439,830537..830664))
location: region:826459-830664:-1
so has part: feature:830537-830664:-1:exon
so has part: feature:829310-829439:-1:exon
so has part: feature:827912-828112:-1:exon
so has part: feature:827205-827369:-1:exon
so has part: feature:826459-826587:-1:exon

XP_005056442.1
type: Protein
SIO_000068: ncbiprotein

position:826459:-1
position: 826459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830664:-1
position: 830664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830537-830664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829310-829439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:827912-828112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:827205-827369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826459-826587:-1:exon

LOC101816854
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101816854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 833156..934152
location: region:833156-934152:1
so has part: feature:833156-934152:1:exon
subclass of: SO_0000010

101816854
type: Gene
SIO_000068: ncbigene

position:833156:1
position: 833156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934152:1
position: 934152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833156-934152:1:exon

LOC101816854
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101816854
product: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303056.1
SIO_010081: LOC101816854
subclass of: SO_0000673
so part of: LOC101816854
location: join(833156..833496,834277..834417,834956..835057,835929..836007,836103..836227,837685..837966,838880..838987,850632..850737,867338..867456,876736..876845,882275..882452,886547..886682,908289..908399,918599..918766,933931..934152)
location: region:833156-934152:1
so has part: feature:833156-833496:1:exon
so has part: feature:834277-834417:1:exon
so has part: feature:834956-835057:1:exon
so has part: feature:835929-836007:1:exon
so has part: feature:836103-836227:1:exon
so has part: feature:837685-837966:1:exon
so has part: feature:838880-838987:1:exon
so has part: feature:850632-850737:1:exon
so has part: feature:867338-867456:1:exon
so has part: feature:876736-876845:1:exon
so has part: feature:882275-882452:1:exon
so has part: feature:886547-886682:1:exon
so has part: feature:908289-908399:1:exon
so has part: feature:918599-918766:1:exon
so has part: feature:933931-934152:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833156-833496:1:exon

position:833496:1
position: 833496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:834277-834417:1:exon

position:834277:1
position: 834277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834417:1
position: 834417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:834956-835057:1:exon

position:834956:1
position: 834956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835057:1
position: 835057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:835929-836007:1:exon

position:835929:1
position: 835929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836007:1
position: 836007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:836103-836227:1:exon

position:836103:1
position: 836103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836227:1
position: 836227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:837685-837966:1:exon

position:837685:1
position: 837685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:837966:1
position: 837966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:838880-838987:1:exon

position:838880:1
position: 838880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838987:1
position: 838987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:850632-850737:1:exon

position:850632:1
position: 850632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:850737:1
position: 850737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:867338-867456:1:exon

position:867338:1
position: 867338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867456:1
position: 867456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:876736-876845:1:exon

position:876736:1
position: 876736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876845:1
position: 876845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:882275-882452:1:exon

position:882275:1
position: 882275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882452:1
position: 882452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:886547-886682:1:exon

position:886547:1
position: 886547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886682:1
position: 886682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:908289-908399:1:exon

position:908289:1
position: 908289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908399:1
position: 908399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:918599-918766:1:exon

position:918599:1
position: 918599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918766:1
position: 918766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:933931-934152:1:exon

position:933931:1
position: 933931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101816854
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101816854
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
translation: MDTWSFFHTCLVSIWLHRFYIYSAIAFGISLWIVIQFTTTRTKRKGEKSHGNPSSPEGTADKLGNGSAPPQAQEVHVAGVKIFYGSQTGTAKRFAQALAEAVTSLNLPVEVINMGDYDPEDGLSEETSSRNICVFLVATYTDGQPPESAAWFSWFCQWLEEAANDFRVGKSFLQGLRYAVFGLGNSAYVDHYNTVGRRMDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKGKFLSRLQALCRGEKKPCSGKCKKGKCKSSGKQSKESSDNEHRTSEHENTEAEELFETSSEEEAGGTDSVIDVEDLGNIMGHMKKAKREQELQEGAAGAGSKEEAERREMITPALREALTKQGDAAWPWGLLQAHLLWHESHRCMEATPSLACANKCVFCWRHHTNPVGTEWRWRTDPPEVILQEAMEKHQSMIRQLKGVAGVKAARLEEALAVKHCALSLVGEPIMYPHINSLVRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLRRIDRPLFKDFWQRFLDSLKALAEKQQRTVYRLTLVKAWNVDEVKAYADLISIGKPDFIEVKGVTYCGESSASSLTLANVPWHGEVLSFAQELARLLPEYGVACEHQHSNCLLLAHSKFQVDGQWRTWIDYGRFQELVREREQSGGSRSFSAAEYTARTPAWALFGARERGFDPLHVRVPRRSKARLASGC
SIO_010081: LOC101816854
subclass of: SO_0000673
so part of: LOC101816854
location: join(833362..833496,834277..834417,834956..835057,835929..836007,836103..836227,837685..837966,838880..838987,850632..850737,867338..867456,876736..876845,882275..882452,886547..886682,908289..908399,918599..918766,933931..934152)
location: region:833362-934152:1
so has part: feature:833362-833496:1:exon
so has part: feature:834277-834417:1:exon
so has part: feature:834956-835057:1:exon
so has part: feature:835929-836007:1:exon
so has part: feature:836103-836227:1:exon
so has part: feature:837685-837966:1:exon
so has part: feature:838880-838987:1:exon
so has part: feature:850632-850737:1:exon
so has part: feature:867338-867456:1:exon
so has part: feature:876736-876845:1:exon
so has part: feature:882275-882452:1:exon
so has part: feature:886547-886682:1:exon
so has part: feature:908289-908399:1:exon
so has part: feature:918599-918766:1:exon
so has part: feature:933931-934152:1:exon

XP_016158542.1
type: Protein
SIO_000068: ncbiprotein

position:833362:1
position: 833362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833362-833496:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:834277-834417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:834956-835057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835929-836007:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836103-836227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:837685-837966:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:838880-838987:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850632-850737:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:867338-867456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:876736-876845:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:882275-882452:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:886547-886682:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:908289-908399:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:918599-918766:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:933931-934152:1:exon

CALN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1021652..1147874
location: region:1021652-1147874:1
so has part: feature:1021652-1147874:1:exon
subclass of: SO_0000010

101817165
type: Gene
SIO_000068: ncbigene

position:1021652:1
position: 1021652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147874:1
position: 1147874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021652-1147874:1:exon

CALN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CALN1
product: calneuron 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005056387.2
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(1021652..1021900,1039594..1039718,1078174..1078317,1099937..1100049,1140523..1140676,1147690..1147874)
location: region:1021652-1147874:1
so has part: feature:1021652-1021900:1:exon
so has part: feature:1039594-1039718:1:exon
so has part: feature:1078174-1078317:1:exon
so has part: feature:1099937-1100049:1:exon
so has part: feature:1140523-1140676:1:exon
so has part: feature:1147690-1147874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1021652-1021900:1:exon

position:1021900:1
position: 1021900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1039594-1039718:1:exon

position:1039594:1
position: 1039594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039718:1
position: 1039718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1078174-1078317:1:exon

position:1078174:1
position: 1078174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078317:1
position: 1078317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1099937-1100049:1:exon

position:1099937:1
position: 1099937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100049:1
position: 1100049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1140523-1140676:1:exon

position:1140523:1
position: 1140523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140676:1
position: 1140676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1147690-1147874:1:exon

position:1147690:1
position: 1147690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CALN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CALN1
product: calneuron 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005056388.2
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(1021652..1022131,1039594..1039718,1078174..1078317,1099937..1100049,1140523..1140676,1147690..1147817)
location: region:1021652-1147817:1
so has part: feature:1021652-1022131:1:exon
so has part: feature:1039594-1039718:1:exon
so has part: feature:1078174-1078317:1:exon
so has part: feature:1099937-1100049:1:exon
so has part: feature:1140523-1140676:1:exon
so has part: feature:1147690-1147817:1:exon

position:1147817:1
position: 1147817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021652-1022131:1:exon

position:1022131:1
position: 1022131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1039594-1039718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078174-1078317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1099937-1100049:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140523-1140676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147690-1147817:1:exon

CALN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 8 isoform X1
translation: MMPQSKEKMPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNENSGNCQTEFEVHAQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(1021884..1021900,1039594..1039718,1078174..1078317,1099937..1100049,1140523..1140676,1147690..1147817)
location: region:1021884-1147817:1
so has part: feature:1021884-1021900:1:exon
so has part: feature:1039594-1039718:1:exon
so has part: feature:1078174-1078317:1:exon
so has part: feature:1099937-1100049:1:exon
so has part: feature:1140523-1140676:1:exon
so has part: feature:1147690-1147817:1:exon

XP_005056444.1
type: Protein
SIO_000068: ncbiprotein

position:1021884:1
position: 1021884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1021884-1021900:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1039594-1039718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078174-1078317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1099937-1100049:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140523-1140676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1147690-1147817:1:exon

CALN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CALN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium-binding protein 8 isoform X2
translation: MPFHHVTAGLLYKGNYLNRSLSAGSDSEQLANISVEELDEIREAFRVLDRDGNGFISKQELGMAMRSLGYMPSEVELAIIMQRLDMDGDGQVDFDEFMTILGPKLVSSEGRDGFLGNTIDSIFWQFDMQRITLEELKHILYHAFRDHLTMKDIENIIINEEESLNENSGNCQTEFEVHAQKQNRQTCVRKSLICAFAMAFIISVMLIAANQILRSGME
SIO_010081: CALN1
subclass of: SO_0000673
so part of: CALN1
location: join(1039601..1039718,1078174..1078317,1099937..1100049,1140523..1140676,1147690..1147817)
location: region:1039601-1147817:1
so has part: feature:1039601-1039718:1:exon
so has part: feature:1078174-1078317:1:exon
so has part: feature:1099937-1100049:1:exon
so has part: feature:1140523-1140676:1:exon
so has part: feature:1147690-1147817:1:exon

XP_005056445.1
type: Protein
SIO_000068: ncbiprotein

position:1039601:1
position: 1039601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039601-1039718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078174-1078317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1099937-1100049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1140523-1140676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1147690-1147817:1:exon

LOC107604078
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1149809..1160654)
location: region:1149809-1160654:-1
so has part: feature:1149809-1160654:-1:exon
subclass of: SO_0000011

107604078
type: Gene
SIO_000068: ncbigene

position:1149809:-1
position: 1149809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160654:-1
position: 1160654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149809-1160654:-1:exon

LOC107604078
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107604078
product: uncharacterized LOC107604078
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001611914.1
SIO_010081: LOC107604078
subclass of: SO_0000673
so part of: LOC107604078
location: complement(join(1149809..1151218,1155421..1155424,1160644..1160654))
location: region:1149809-1160654:-1
so has part: feature:1160644-1160654:-1:exon
so has part: feature:1155421-1155424:-1:exon
so has part: feature:1149809-1151218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1160644-1160654:-1:exon

position:1160644:-1
position: 1160644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1155421-1155424:-1:exon

position:1155421:-1
position: 1155421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155424:-1
position: 1155424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1149809-1151218:-1:exon

position:1151218:-1
position: 1151218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WBSCR17
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: WBSCR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1188909..1428928)
location: region:1188909-1428928:-1
so has part: feature:1188909-1428928:-1:exon
subclass of: SO_0000010

101817487
type: Gene
SIO_000068: ncbigene

position:1188909:-1
position: 1188909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428928:-1
position: 1428928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188909-1428928:-1:exon

WBSCR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WBSCR17
product: Williams-Beuren syndrome chromosome region 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005056392.2
SIO_010081: WBSCR17
subclass of: SO_0000673
so part of: WBSCR17
location: complement(join(1188909..1189610,1190165..1190332,1197478..1197573,1200507..1200644,1204951..1205136,1268326..1268443,1322244..1322441,1324924..1325098,1340593..1340759,1365924..1366107,1428632..1428928))
location: region:1188909-1428928:-1
so has part: feature:1428632-1428928:-1:exon
so has part: feature:1365924-1366107:-1:exon
so has part: feature:1340593-1340759:-1:exon
so has part: feature:1324924-1325098:-1:exon
so has part: feature:1322244-1322441:-1:exon
so has part: feature:1268326-1268443:-1:exon
so has part: feature:1204951-1205136:-1:exon
so has part: feature:1200507-1200644:-1:exon
so has part: feature:1197478-1197573:-1:exon
so has part: feature:1190165-1190332:-1:exon
so has part: feature:1188909-1189610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1428632-1428928:-1:exon

position:1428632:-1
position: 1428632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1365924-1366107:-1:exon

position:1365924:-1
position: 1365924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366107:-1
position: 1366107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1340593-1340759:-1:exon

position:1340593:-1
position: 1340593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1340759:-1
position: 1340759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1324924-1325098:-1:exon

position:1324924:-1
position: 1324924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325098:-1
position: 1325098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1322244-1322441:-1:exon

position:1322244:-1
position: 1322244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1322441:-1
position: 1322441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1268326-1268443:-1:exon

position:1268326:-1
position: 1268326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268443:-1
position: 1268443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1204951-1205136:-1:exon

position:1204951:-1
position: 1204951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205136:-1
position: 1205136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1200507-1200644:-1:exon

position:1200507:-1
position: 1200507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200644:-1
position: 1200644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1197478-1197573:-1:exon

position:1197478:-1
position: 1197478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197573:-1
position: 1197573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1190165-1190332:-1:exon

position:1190165:-1
position: 1190165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190332:-1
position: 1190332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1188909-1189610:-1:exon

position:1189610:-1
position: 1189610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WBSCR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WBSCR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative polypeptide N-acetylgalactosaminyltransferase-like protein 3
translation: MASLRRVKVLLVLNLIAVAGFVLFLAKCRPITTKSGDSFHDIHPRAEVANLTAHGISSIQDAVLKRLSLLEDIVYRQLNGLSKSLGLIEGYGGRGKGGLPATLSPEEEEKAKGPHEKYGYNSYLSEKISLDRSIPDYRPTKCKELKYGKDLPQISIIFIFVNEALSVILRSVHSAVNHTPAPLLKEIILVDDNSDEEELKAPLEEYVNKRYPGLVKVVRNQKREGLIRARIEGWKAATGQVTGFFDAHVEFTAGWAEPVLSRIQENRKRVILPSIDNIKQDNFEVQRYENSAHGYSWELWCMYISPPKDWWDAGDPSLPIRTPAMIGCSFVVNRKFFGEIGLLDPGMDVYGGENIELGIKVWLCGGSMEVLPCSRVAHIERKKKPYNNNIGFYTKRNALRVAEVWMDDYKWHVYIAWNLPLENPGIDIGDVSERKALRKSLKCKNFQWYLDHVYPEMRRYNNTIAYGELRNNKAKDVCLDQGPQENHTAILYPCHGWGPQLARYTKEGFLHLGALGTTTLLPDTRCLVDTGKSRFPQLLDCDKVKSSLHKRWNFIQNGAILNKGTGRCLEVENRGMAGIDLILRSCTGQRWTIKNFIK
SIO_010081: WBSCR17
subclass of: SO_0000673
so part of: WBSCR17
location: complement(join(1189482..1189610,1190165..1190332,1197478..1197573,1200507..1200644,1204951..1205136,1268326..1268443,1322244..1322441,1324924..1325098,1340593..1340759,1365924..1366107,1428632..1428869))
location: region:1189482-1428869:-1
so has part: feature:1428632-1428869:-1:exon
so has part: feature:1365924-1366107:-1:exon
so has part: feature:1340593-1340759:-1:exon
so has part: feature:1324924-1325098:-1:exon
so has part: feature:1322244-1322441:-1:exon
so has part: feature:1268326-1268443:-1:exon
so has part: feature:1204951-1205136:-1:exon
so has part: feature:1200507-1200644:-1:exon
so has part: feature:1197478-1197573:-1:exon
so has part: feature:1190165-1190332:-1:exon
so has part: feature:1189482-1189610:-1:exon

XP_005056449.1
type: Protein
SIO_000068: ncbiprotein

position:1189482:-1
position: 1189482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428869:-1
position: 1428869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428632-1428869:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1365924-1366107:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1340593-1340759:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1324924-1325098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1322244-1322441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1268326-1268443:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1204951-1205136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1200507-1200644:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1197478-1197573:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1190165-1190332:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1189482-1189610:-1:exon

AUTS2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1513623..1541839)
location: region:1513623-1541839:-1
so has part: feature:1513623-1541839:-1:exon
subclass of: SO_0000010

101822142
type: Gene
SIO_000068: ncbigene

position:1513623:-1
position: 1513623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541839:-1
position: 1541839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513623-1541839:-1:exon

AUTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AUTS2
product: autism susceptibility candidate 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_016302965.1
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1513623..1515634,1515689..1516528,1521625..1521847,1522671..1522754,1523986..1524063,1524587..1524728,1528326..1528397,1529902..1529931,1531602..1531673,1534769..1534864,1539505..1539725,1541721..1541839))
location: region:1513623-1541839:-1
so has part: feature:1541721-1541839:-1:exon
so has part: feature:1539505-1539725:-1:exon
so has part: feature:1534769-1534864:-1:exon
so has part: feature:1531602-1531673:-1:exon
so has part: feature:1529902-1529931:-1:exon
so has part: feature:1528326-1528397:-1:exon
so has part: feature:1524587-1524728:-1:exon
so has part: feature:1523986-1524063:-1:exon
so has part: feature:1522671-1522754:-1:exon
so has part: feature:1521625-1521847:-1:exon
so has part: feature:1515689-1516528:-1:exon
so has part: feature:1513623-1515634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1541721-1541839:-1:exon

position:1541721:-1
position: 1541721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1539505-1539725:-1:exon

position:1539505:-1
position: 1539505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539725:-1
position: 1539725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1534769-1534864:-1:exon

position:1534769:-1
position: 1534769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1534864:-1
position: 1534864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1531602-1531673:-1:exon

position:1531602:-1
position: 1531602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1531673:-1
position: 1531673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1529902-1529931:-1:exon

position:1529902:-1
position: 1529902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1529931:-1
position: 1529931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1528326-1528397:-1:exon

position:1528326:-1
position: 1528326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528397:-1
position: 1528397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1524587-1524728:-1:exon

position:1524587:-1
position: 1524587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524728:-1
position: 1524728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1523986-1524063:-1:exon

position:1523986:-1
position: 1523986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1524063:-1
position: 1524063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1522671-1522754:-1:exon

position:1522671:-1
position: 1522671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1522754:-1
position: 1522754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1521625-1521847:-1:exon

position:1521625:-1
position: 1521625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1521847:-1
position: 1521847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1515689-1516528:-1:exon

position:1515689:-1
position: 1515689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516528:-1
position: 1516528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1513623-1515634:-1:exon

position:1515634:-1
position: 1515634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AUTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AUTS2
product: autism susceptibility candidate 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016302963.1
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1513623..1515634,1515689..1516528,1521625..1521847,1522671..1522754,1523986..1524063,1524587..1524728,1528326..1528397,1529902..1529931,1531602..1531673,1534769..1534864,1539484..1539725,1541721..1541839))
location: region:1513623-1541839:-1
so has part: feature:1541721-1541839:-1:exon
so has part: feature:1539484-1539725:-1:exon
so has part: feature:1534769-1534864:-1:exon
so has part: feature:1531602-1531673:-1:exon
so has part: feature:1529902-1529931:-1:exon
so has part: feature:1528326-1528397:-1:exon
so has part: feature:1524587-1524728:-1:exon
so has part: feature:1523986-1524063:-1:exon
so has part: feature:1522671-1522754:-1:exon
so has part: feature:1521625-1521847:-1:exon
so has part: feature:1515689-1516528:-1:exon
so has part: feature:1513623-1515634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1541721-1541839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539484-1539725:-1:exon

position:1539484:-1
position: 1539484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1534769-1534864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1531602-1531673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1529902-1529931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1528326-1528397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524587-1524728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1523986-1524063:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1522671-1522754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1521625-1521847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515689-1516528:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1513623-1515634:-1:exon

AUTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AUTS2
product: autism susceptibility candidate 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016302962.1
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1513623..1515634,1515689..1516528,1521625..1521847,1522671..1522754,1523986..1524063,1524587..1524728,1528326..1528397,1531602..1531673,1534769..1534864,1539050..1539094,1539484..1539725,1541721..1541839))
location: region:1513623-1541839:-1
so has part: feature:1541721-1541839:-1:exon
so has part: feature:1539484-1539725:-1:exon
so has part: feature:1539050-1539094:-1:exon
so has part: feature:1534769-1534864:-1:exon
so has part: feature:1531602-1531673:-1:exon
so has part: feature:1528326-1528397:-1:exon
so has part: feature:1524587-1524728:-1:exon
so has part: feature:1523986-1524063:-1:exon
so has part: feature:1522671-1522754:-1:exon
so has part: feature:1521625-1521847:-1:exon
so has part: feature:1515689-1516528:-1:exon
so has part: feature:1513623-1515634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1541721-1541839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539484-1539725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539050-1539094:-1:exon

position:1539050:-1
position: 1539050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1539094:-1
position: 1539094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1534769-1534864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1531602-1531673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1528326-1528397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524587-1524728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1523986-1524063:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1522671-1522754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1521625-1521847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515689-1516528:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1513623-1515634:-1:exon

AUTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AUTS2
product: autism susceptibility candidate 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016302961.1
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1513623..1515631,1515689..1516528,1521625..1521847,1522671..1522754,1523986..1524063,1524587..1524728,1528326..1528397,1529902..1529931,1531602..1531673,1534769..1534864,1539050..1539094,1539484..1539725,1541721..1541839))
location: region:1513623-1541839:-1
so has part: feature:1541721-1541839:-1:exon
so has part: feature:1539484-1539725:-1:exon
so has part: feature:1539050-1539094:-1:exon
so has part: feature:1534769-1534864:-1:exon
so has part: feature:1531602-1531673:-1:exon
so has part: feature:1529902-1529931:-1:exon
so has part: feature:1528326-1528397:-1:exon
so has part: feature:1524587-1524728:-1:exon
so has part: feature:1523986-1524063:-1:exon
so has part: feature:1522671-1522754:-1:exon
so has part: feature:1521625-1521847:-1:exon
so has part: feature:1515689-1516528:-1:exon
so has part: feature:1513623-1515631:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1541721-1541839:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539484-1539725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539050-1539094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1534769-1534864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1531602-1531673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1529902-1529931:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1528326-1528397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1524587-1524728:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1523986-1524063:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1522671-1522754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1521625-1521847:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1515689-1516528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1513623-1515631:-1:exon

position:1515631:-1
position: 1515631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AUTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein isoform X4
translation: MFAPPTALPPPPPLTSGTLQVPGHPAGSTYSEQDLLRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMLFHSYPPAVSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSTASGGHPAGTPFGPPPHHSNFLNPAAHLEPFNRPASFSGLTAVGSNAFGGLGNPAVTPNSMFGHKDGPSMQSFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSSSAAAHDRDRDVDKRDSSVSKDDKERESIEKRHSSHPSPAPIHPVNSLGHNRSSSEQIRSHLNPEVREKEKPKERERDHSESRKEINVEEHKVKDNYVSEKEGLSHESRVVEESKQMPRVPSPYARPPVVESTRPNSTSNREADRKNEPAYDNPKKSSEVKVKEERKEDHDVQPEGPQTHRSSDQPPPISTSNVHPSPLVSMPMTVGVTGIHHMNSISGLDRTRMMTPFMGISPIPGGERFPYPSFHWDPMRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHPHHHHHPLSVDPRREHERGAHLDERERLHMLREDYEHARLHSVHPAALDGHLPHPGLLTPGLPSMHYPRLSPPTGHQNGLLNKTPPTAALSAPPPLISTLGPRPGSPRRTTPLSAEMRERPPSHTLKDIEAR
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1515235..1515634,1515689..1516528,1521625..1521847,1522671..1522754,1523986..1524063,1524587..1524728,1528326..1528397,1529902..1529931,1531602..1531673,1534769..1534864,1539505..1539725,1541721..1541814))
location: region:1515235-1541814:-1
so has part: feature:1541721-1541814:-1:exon
so has part: feature:1539505-1539725:-1:exon
so has part: feature:1534769-1534864:-1:exon
so has part: feature:1531602-1531673:-1:exon
so has part: feature:1529902-1529931:-1:exon
so has part: feature:1528326-1528397:-1:exon
so has part: feature:1524587-1524728:-1:exon
so has part: feature:1523986-1524063:-1:exon
so has part: feature:1522671-1522754:-1:exon
so has part: feature:1521625-1521847:-1:exon
so has part: feature:1515689-1516528:-1:exon
so has part: feature:1515235-1515634:-1:exon

XP_016158451.1
type: Protein
SIO_000068: ncbiprotein

position:1515235:-1
position: 1515235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541814:-1
position: 1541814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1541721-1541814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539505-1539725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1534769-1534864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1531602-1531673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1529902-1529931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1528326-1528397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524587-1524728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1523986-1524063:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1522671-1522754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1521625-1521847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515689-1516528:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1515235-1515634:-1:exon

AUTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein isoform X3
translation: MFAPPTALPPPPPLTSGTLQVPGHPAGSTYSEQDLLRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMVRTPGRNLFHSYPPAVSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSTASGGHPAGTPFGPPPHHSNFLNPAAHLEPFNRPASFSGLTAVGSNAFGGLGNPAVTPNSMFGHKDGPSMQSFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSSSAAAHDRDRDVDKRDSSVSKDDKERESIEKRHSSHPSPAPIHPVNSLGHNRSSSEQIRSHLNPEVREKEKPKERERDHSESRKEINVEEHKVKDNYVSEKEGLSHESRVVEESKQMPRVPSPYARPPVVESTRPNSTSNREADRKNEPAYDNPKKSSEVKVKEERKEDHDVQPEGPQTHRSSDQPPPISTSNVHPSPLVSMPMTVGVTGIHHMNSISGLDRTRMMTPFMGISPIPGGERFPYPSFHWDPMRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHPHHHHHPLSVDPRREHERGAHLDERERLHMLREDYEHARLHSVHPAALDGHLPHPGLLTPGLPSMHYPRLSPPTGHQNGLLNKTPPTAALSAPPPLISTLGPRPGSPRRTTPLSAEMRERPPSHTLKDIEAR
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1515235..1515634,1515689..1516528,1521625..1521847,1522671..1522754,1523986..1524063,1524587..1524728,1528326..1528397,1529902..1529931,1531602..1531673,1534769..1534864,1539484..1539725,1541721..1541814))
location: region:1515235-1541814:-1
so has part: feature:1541721-1541814:-1:exon
so has part: feature:1539484-1539725:-1:exon
so has part: feature:1534769-1534864:-1:exon
so has part: feature:1531602-1531673:-1:exon
so has part: feature:1529902-1529931:-1:exon
so has part: feature:1528326-1528397:-1:exon
so has part: feature:1524587-1524728:-1:exon
so has part: feature:1523986-1524063:-1:exon
so has part: feature:1522671-1522754:-1:exon
so has part: feature:1521625-1521847:-1:exon
so has part: feature:1515689-1516528:-1:exon
so has part: feature:1515235-1515634:-1:exon

XP_016158449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1541721-1541814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539484-1539725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1534769-1534864:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1531602-1531673:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1529902-1529931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1528326-1528397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524587-1524728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1523986-1524063:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1522671-1522754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1521625-1521847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515689-1516528:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1515235-1515634:-1:exon

AUTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein isoform X2
translation: MFAPPTALPPPPPLTSGTLQVPGHPAGSTYSEQDLLRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMVRTPGRNFDKYPTKVDPFYRHSLFHSYPPAVSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSTASGGHPAGTPFGPPPHHSNFLNPAAHLEPFNRPASFSGLTAVGSNAFGGLGNPAVTPNSMFGHKDGPSMQSFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSSSAAAHDRDRDVDKRDSSVSKDDKERESIEKRHSSHPSPAPIHPVNSLGHNRSSSEQIRSHLNPEVREKEKPKERERDHSESRKEINVEEHKVKDNYVSEKEGLSHESRVVEESKQMPRVPSPYARPPVVESTRPNSTSNREADRKNEPAYDNPKKSSEVKVKEERKEDHDVQPEGPQTHRSSDQPPPISTSNVHPSPLVSMPMTVGVTGIHHMNSISGLDRTRMMTPFMGISPIPGGERFPYPSFHWDPMRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHPHHHHHPLSVDPRREHERGAHLDERERLHMLREDYEHARLHSVHPAALDGHLPHPGLLTPGLPSMHYPRLSPPTGHQNGLLNKTPPTAALSAPPPLISTLGPRPGSPRRTTPLSAEMRERPPSHTLKDIEAR
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1515235..1515634,1515689..1516528,1521625..1521847,1522671..1522754,1523986..1524063,1524587..1524728,1528326..1528397,1531602..1531673,1534769..1534864,1539050..1539094,1539484..1539725,1541721..1541814))
location: region:1515235-1541814:-1
so has part: feature:1541721-1541814:-1:exon
so has part: feature:1539484-1539725:-1:exon
so has part: feature:1539050-1539094:-1:exon
so has part: feature:1534769-1534864:-1:exon
so has part: feature:1531602-1531673:-1:exon
so has part: feature:1528326-1528397:-1:exon
so has part: feature:1524587-1524728:-1:exon
so has part: feature:1523986-1524063:-1:exon
so has part: feature:1522671-1522754:-1:exon
so has part: feature:1521625-1521847:-1:exon
so has part: feature:1515689-1516528:-1:exon
so has part: feature:1515235-1515634:-1:exon

XP_016158448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1541721-1541814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539484-1539725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539050-1539094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1534769-1534864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1531602-1531673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1528326-1528397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1524587-1524728:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1523986-1524063:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1522671-1522754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1521625-1521847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1515689-1516528:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1515235-1515634:-1:exon

AUTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AUTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autism susceptibility gene 2 protein isoform X1
translation: MFAPPTALPPPPPLTSGTLQVPGHPAGSTYSEQDLLRQELNTRFLASQSADRGASLGPPPYLRTEFHQHQHQHQHTHQHTHQHTFTPFPHAIPPTAIMPTPAPPMVRTPGRNFDKYPTKVDPFYRHSLFHSYPPAVSGIPPMIPPTGPFGSLQGAFQPKTSNPIDVAARPGTVPHTLLQKDPRLTDPFRPMLRKPGKWCAMHVHIAWQIYHHQQKVKKQMQSDPHKLDFGLKPEFLSRPPGPSLFGAIHHPHDLARPSTLFSTASGGHPAGTPFGPPPHHSNFLNPAAHLEPFNRPASFSGLTAVGSNAFGGLGNPAVTPNSMFGHKDGPSMQSFSNPHEPWNRLHRTPPSFPTPPPWLKPGELERSSSAAAHDRDRDVDKRDSSVSKDDKERESIEKRHSSHPSPAPIHPVNSLGHNRSSSEQIRSHLNPEVREKEKPKERERDHSESRKEINVEEHKVKDNYVSEKEGLSHESRVVEESKQMPRVPSPYARPPVVESTRPNSTSNREADRKNEPAYDNPKKSSEVKVKEERKEDHDVQPEGPQTHRSSDQPPPISTSNVHPSPLVSMPMTVGVTGIHHMNSISGLDRTRMMTPFMGISPIPGGERFPYPSFHWDPMRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTPRLYEADRSFRDREPHDYNHHHHHHPLSVDPRREHERGAHLDERERLHMLREDYEHARLHSVHPAALDGHLPHPGLLTPGLPSMHYPRLSPPTGHQNGLLNKTPPTAALSAPPPLISTLGPRPGSPRRTTPLSAEMRERPPSHTLKDIEAR
SIO_010081: AUTS2
subclass of: SO_0000673
so part of: AUTS2
location: complement(join(1515235..1515631,1515689..1516528,1521625..1521847,1522671..1522754,1523986..1524063,1524587..1524728,1528326..1528397,1529902..1529931,1531602..1531673,1534769..1534864,1539050..1539094,1539484..1539725,1541721..1541814))
location: region:1515235-1541814:-1
so has part: feature:1541721-1541814:-1:exon
so has part: feature:1539484-1539725:-1:exon
so has part: feature:1539050-1539094:-1:exon
so has part: feature:1534769-1534864:-1:exon
so has part: feature:1531602-1531673:-1:exon
so has part: feature:1529902-1529931:-1:exon
so has part: feature:1528326-1528397:-1:exon
so has part: feature:1524587-1524728:-1:exon
so has part: feature:1523986-1524063:-1:exon
so has part: feature:1522671-1522754:-1:exon
so has part: feature:1521625-1521847:-1:exon
so has part: feature:1515689-1516528:-1:exon
so has part: feature:1515235-1515631:-1:exon

XP_016158447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1541721-1541814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539484-1539725:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539050-1539094:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1534769-1534864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1531602-1531673:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1529902-1529931:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1528326-1528397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1524587-1524728:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1523986-1524063:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1522671-1522754:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1521625-1521847:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1515689-1516528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1515235-1515631:-1:exon

LOC107604053
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107604053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2125249..2126820
location: region:2125249-2126820:1
so has part: feature:2125249-2126820:1:exon
subclass of: SO_0000010

107604053
type: Gene
SIO_000068: ncbigene

position:2125249:1
position: 2125249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2126820:1
position: 2126820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2125249-2126820:1:exon

LOC107604053
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107604053
product: neurofilament medium polypeptide-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_016302877.1
SIO_010081: LOC107604053
subclass of: SO_0000673
so part of: LOC107604053
location: join(2125249..2125434,2126524..2126820)
location: region:2125249-2126820:1
so has part: feature:2125249-2125434:1:exon
so has part: feature:2126524-2126820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2125249-2125434:1:exon

position:2125434:1
position: 2125434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2126524-2126820:1:exon

position:2126524:1
position: 2126524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107604053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107604053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurofilament medium polypeptide-like
translation: MQPHLLRSPSARGPQPGERPAPPGPGTGESPESPERAPRSPRELRDPRESPEIPERPPGPERTGESPESSESPEGHERSESSESPERFKSSESPGRPESRESPECPERPESSESPESPQSPLSHPSRRTAAATPGLHPLHLSSAALRNTSTSAQGQVCWR
SIO_010081: LOC107604053
subclass of: SO_0000673
so part of: LOC107604053
location: join(2125249..2125434,2126524..2126820)
location: region:2125249-2126820:1
so has part: feature:2125249-2125434:1:exon
so has part: feature:2126524-2126820:1:exon

XP_016158363.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2125249-2125434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2126524-2126820:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 2623733..2628732
location: region:2623733-2628732:1
so has part: feature:2623733-2628732:1:region

position:2623733:1
position: 2623733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2628732:1
position: 2628732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2623733-2628732:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 2667716..2672715
location: region:2667716-2672715:1
so has part: feature:2667716-2672715:1:region

position:2667716:1
position: 2667716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2672715:1
position: 2672715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2667716-2672715:1:region

LOC101805886
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101805886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2883389..2886708
location: region:2883389-2886708:1
so has part: feature:2883389-2886708:1:exon
subclass of: SO_0000011

101805886
type: Gene
SIO_000068: ncbigene

position:2883389:1
position: 2883389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886708:1
position: 2886708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883389-2886708:1:exon

LOC101805886
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101805886
product: uncharacterized LOC101805886
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001611903.1
SIO_010081: LOC101805886
subclass of: SO_0000673
so part of: LOC101805886
location: join(2883389..2883499,2885898..2886000,2886643..2886708)
location: region:2883389-2886708:1
so has part: feature:2883389-2883499:1:exon
so has part: feature:2885898-2886000:1:exon
so has part: feature:2886643-2886708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2883389-2883499:1:exon

position:2883499:1
position: 2883499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2885898-2886000:1:exon

position:2885898:1
position: 2885898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2886000:1
position: 2886000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2886643-2886708:1:exon

position:2886643:1
position: 2886643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GATSL2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GATSL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3028024..3148830
location: region:3028024-3148830:1
so has part: feature:3028024-3148830:1:exon
subclass of: SO_0000010

101805998
type: Gene
SIO_000068: ncbigene

position:3028024:1
position: 3028024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148830:1
position: 3148830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3028024-3148830:1:exon

GATSL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GATSL2
product: GATS protein-like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005056414.1
SIO_010081: GATSL2
subclass of: SO_0000673
so part of: GATSL2
location: join(3028024..3028215,3093790..3093860,3140263..3140456,3141240..3141372,3142688..3142811,3143358..3143468,3144836..3144918,3145836..3145930,3148743..3148830)
location: region:3028024-3148830:1
so has part: feature:3028024-3028215:1:exon
so has part: feature:3093790-3093860:1:exon
so has part: feature:3140263-3140456:1:exon
so has part: feature:3141240-3141372:1:exon
so has part: feature:3142688-3142811:1:exon
so has part: feature:3143358-3143468:1:exon
so has part: feature:3144836-3144918:1:exon
so has part: feature:3145836-3145930:1:exon
so has part: feature:3148743-3148830:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3028024-3028215:1:exon

position:3028215:1
position: 3028215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3093790-3093860:1:exon

position:3093790:1
position: 3093790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3093860:1
position: 3093860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3140263-3140456:1:exon

position:3140263:1
position: 3140263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3140456:1
position: 3140456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3141240-3141372:1:exon

position:3141240:1
position: 3141240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141372:1
position: 3141372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3142688-3142811:1:exon

position:3142688:1
position: 3142688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3142811:1
position: 3142811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3143358-3143468:1:exon

position:3143358:1
position: 3143358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3143468:1
position: 3143468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3144836-3144918:1:exon

position:3144836:1
position: 3144836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144918:1
position: 3144918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3145836-3145930:1:exon

position:3145836:1
position: 3145836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145930:1
position: 3145930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3148743-3148830:1:exon

position:3148743:1
position: 3148743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GATSL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GATSL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GATS-like protein 2
translation: MELHILEHRLRVASIAKESIQLFTYGLIKLAFLSSKTRCKFFSLTETPEDYTIIVDEEGFLELPSSEHLSVADATWLALNVVSGGGGFSSSQPIGVTKIAKSVIAPLADQNISVFMLSTYQTDFILVRERDLPFVMHTLAAEFTILRVVNGETVAADDFGVTNGFVKPKLVQRPVIHPLSSPSNMFCVTSLDPDTLPTVATLLMDVMFYSNGVKDSVVGNEDSGHIRFFSFSLIEGYISLVMDVQTQQRFPNNLLFTSASGELWKMVRIGGQPLGFDECGIVAQISEPLAAADIPAYYISTFKFDHALVPEENINGVVNALQVSQAEKH
SIO_010081: GATSL2
subclass of: SO_0000673
so part of: GATSL2
location: join(3028103..3028215,3093790..3093860,3140263..3140456,3141240..3141372,3142688..3142811,3143358..3143468,3144836..3144918,3145836..3145930,3148743..3148808)
location: region:3028103-3148808:1
so has part: feature:3028103-3028215:1:exon
so has part: feature:3093790-3093860:1:exon
so has part: feature:3140263-3140456:1:exon
so has part: feature:3141240-3141372:1:exon
so has part: feature:3142688-3142811:1:exon
so has part: feature:3143358-3143468:1:exon
so has part: feature:3144836-3144918:1:exon
so has part: feature:3145836-3145930:1:exon
so has part: feature:3148743-3148808:1:exon

XP_005056471.1
type: Protein
SIO_000068: ncbiprotein

position:3028103:1
position: 3028103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148808:1
position: 3148808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3028103-3028215:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3093790-3093860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3140263-3140456:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3141240-3141372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3142688-3142811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3143358-3143468:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3144836-3144918:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3145836-3145930:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3148743-3148808:1:exon

WBSCR16
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: WBSCR16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3166206..3181976)
location: region:3166206-3181976:-1
so has part: feature:3166206-3181976:-1:exon
subclass of: SO_0000010

101806189
type: Gene
SIO_000068: ncbigene

position:3166206:-1
position: 3166206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3181976:-1
position: 3181976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3166206-3181976:-1:exon

WBSCR16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WBSCR16
product: Williams-Beuren syndrome chromosome region 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005056415.2
SIO_010081: WBSCR16
subclass of: SO_0000673
so part of: WBSCR16
location: complement(join(3166206..3166655,3166855..3166905,3168429..3168514,3169636..3169809,3170824..3170908,3172310..3172491,3173511..3173595,3175160..3175211,3176286..3176352,3177175..3177303,3179909..3180038,3181183..3181416,3181953..3181976))
location: region:3166206-3181976:-1
so has part: feature:3181953-3181976:-1:exon
so has part: feature:3181183-3181416:-1:exon
so has part: feature:3179909-3180038:-1:exon
so has part: feature:3177175-3177303:-1:exon
so has part: feature:3176286-3176352:-1:exon
so has part: feature:3175160-3175211:-1:exon
so has part: feature:3173511-3173595:-1:exon
so has part: feature:3172310-3172491:-1:exon
so has part: feature:3170824-3170908:-1:exon
so has part: feature:3169636-3169809:-1:exon
so has part: feature:3168429-3168514:-1:exon
so has part: feature:3166855-3166905:-1:exon
so has part: feature:3166206-3166655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3181953-3181976:-1:exon

position:3181953:-1
position: 3181953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3181183-3181416:-1:exon

position:3181183:-1
position: 3181183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3181416:-1
position: 3181416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3179909-3180038:-1:exon

position:3179909:-1
position: 3179909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3180038:-1
position: 3180038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3177175-3177303:-1:exon

position:3177175:-1
position: 3177175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3177303:-1
position: 3177303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3176286-3176352:-1:exon

position:3176286:-1
position: 3176286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3176352:-1
position: 3176352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3175160-3175211:-1:exon

position:3175160:-1
position: 3175160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3175211:-1
position: 3175211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3173511-3173595:-1:exon

position:3173511:-1
position: 3173511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3173595:-1
position: 3173595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3172310-3172491:-1:exon

position:3172310:-1
position: 3172310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3172491:-1
position: 3172491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3170824-3170908:-1:exon

position:3170824:-1
position: 3170824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3170908:-1
position: 3170908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3169636-3169809:-1:exon

position:3169636:-1
position: 3169636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3169809:-1
position: 3169809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3168429-3168514:-1:exon

position:3168429:-1
position: 3168429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3168514:-1
position: 3168514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3166855-3166905:-1:exon

position:3166855:-1
position: 3166855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3166905:-1
position: 3166905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3166206-3166655:-1:exon

position:3166655:-1
position: 3166655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WBSCR16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WBSCR16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Williams-Beuren syndrome chromosomal region 16 protein
translation: MAAARGQAGVGVAAGPPSTRQLREAEAAAPVFQYAGKAAKRKDRVFVWGFSYSGALGVPSFVRPDAGWKKPRRIQPTPYRLETEEKISSAACGYGFTLLASNTRDITKVWGTGLNKDSQLGFQRSRRDQTKGYEYVLEPSPIPLPLEKPQQTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSGSHLIHQLKEFDSEVVQVVCGQDHSLFRTKKGSVYACGWGADGQTGLGHYNITSVPTKLHGDIAGVNIIQVSSYGDCCLAVSDEGDVFGWGNSEYLQLASVTEHTQVNVPRHLPFKIGKVKEAACGGTGNAVLTEEGNVFVWGYGILGKGPNLIETAVPEMIPPSLFGWSDFSPDVRVAHVRCGLSQFAALTNRGELFVWGKNLRGCLGTGRMEDQYFPWRVTVPGEVVDVACGVDHMEGSTFPKEHGSARSALAPS
SIO_010081: WBSCR16
subclass of: SO_0000673
so part of: WBSCR16
location: complement(join(3166596..3166655,3166855..3166905,3168429..3168514,3169636..3169809,3170824..3170908,3172310..3172491,3173511..3173595,3175160..3175211,3176286..3176352,3177175..3177303,3179909..3180038,3181183..3181416,3181953..3181976))
location: region:3166596-3181976:-1
so has part: feature:3181953-3181976:-1:exon
so has part: feature:3181183-3181416:-1:exon
so has part: feature:3179909-3180038:-1:exon
so has part: feature:3177175-3177303:-1:exon
so has part: feature:3176286-3176352:-1:exon
so has part: feature:3175160-3175211:-1:exon
so has part: feature:3173511-3173595:-1:exon
so has part: feature:3172310-3172491:-1:exon
so has part: feature:3170824-3170908:-1:exon
so has part: feature:3169636-3169809:-1:exon
so has part: feature:3168429-3168514:-1:exon
so has part: feature:3166855-3166905:-1:exon
so has part: feature:3166596-3166655:-1:exon

XP_005056472.2
type: Protein
SIO_000068: ncbiprotein

position:3166596:-1
position: 3166596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3181953-3181976:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3181183-3181416:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3179909-3180038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3177175-3177303:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3176286-3176352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3175160-3175211:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3173511-3173595:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3172310-3172491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3170824-3170908:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3169636-3169809:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3168429-3168514:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3166855-3166905:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3166596-3166655:-1:exon

NCF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3183447..3192614)
location: region:3183447-3192614:-1
so has part: feature:3183447-3192614:-1:exon
subclass of: SO_0000010

101806380
type: Gene
SIO_000068: ncbigene

position:3183447:-1
position: 3183447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3192614:-1
position: 3192614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3183447-3192614:-1:exon

NCF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NCF1
product: neutrophil cytosolic factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005056417.1
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(3183447..3183877,3184756..3184898,3186439..3186546,3187205..3187322,3188529..3188636,3189018..3189140,3189426..3189481,3189598..3189763,3190922..3190997,3191300..3191380,3191839..3192614))
location: region:3183447-3192614:-1
so has part: feature:3191839-3192614:-1:exon
so has part: feature:3191300-3191380:-1:exon
so has part: feature:3190922-3190997:-1:exon
so has part: feature:3189598-3189763:-1:exon
so has part: feature:3189426-3189481:-1:exon
so has part: feature:3189018-3189140:-1:exon
so has part: feature:3188529-3188636:-1:exon
so has part: feature:3187205-3187322:-1:exon
so has part: feature:3186439-3186546:-1:exon
so has part: feature:3184756-3184898:-1:exon
so has part: feature:3183447-3183877:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3191839-3192614:-1:exon

position:3191839:-1
position: 3191839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3191300-3191380:-1:exon

position:3191300:-1
position: 3191300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3191380:-1
position: 3191380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3190922-3190997:-1:exon

position:3190922:-1
position: 3190922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3190997:-1
position: 3190997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3189598-3189763:-1:exon

position:3189598:-1
position: 3189598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3189763:-1
position: 3189763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3189426-3189481:-1:exon

position:3189426:-1
position: 3189426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3189481:-1
position: 3189481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3189018-3189140:-1:exon

position:3189018:-1
position: 3189018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3189140:-1
position: 3189140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3188529-3188636:-1:exon

position:3188529:-1
position: 3188529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3188636:-1
position: 3188636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3187205-3187322:-1:exon

position:3187205:-1
position: 3187205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3187322:-1
position: 3187322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3186439-3186546:-1:exon

position:3186439:-1
position: 3186439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3186546:-1
position: 3186546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3184756-3184898:-1:exon

position:3184756:-1
position: 3184756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3184898:-1
position: 3184898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3183447-3183877:-1:exon

position:3183877:-1
position: 3183877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NCF1
product: neutrophil cytosolic factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005056416.2
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(3183447..3183877,3184756..3184898,3186439..3186546,3187205..3187322,3188529..3188636,3189018..3189140,3189426..3189481,3189598..3189763,3190922..3191281))
location: region:3183447-3191281:-1
so has part: feature:3190922-3191281:-1:exon
so has part: feature:3189598-3189763:-1:exon
so has part: feature:3189426-3189481:-1:exon
so has part: feature:3189018-3189140:-1:exon
so has part: feature:3188529-3188636:-1:exon
so has part: feature:3187205-3187322:-1:exon
so has part: feature:3186439-3186546:-1:exon
so has part: feature:3184756-3184898:-1:exon
so has part: feature:3183447-3183877:-1:exon

position:3191281:-1
position: 3191281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3190922-3191281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3189598-3189763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189426-3189481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3189018-3189140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3188529-3188636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3187205-3187322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3186439-3186546:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3184756-3184898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3183447-3183877:-1:exon

NCF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1 isoform X2
translation: MGDAFIRHIELLGYEKRFFPSQHYVYMFLVKWNDLSEKVVYRRFTEIYEFHKALKEMFPIESGDINIENRIIPHLPAPKWFDGQRSTQNRQGTLAEYCHTLVNLPHKISRCLHVVSFFKVRHDDMNPVTDSQIKKPEVFLLPKDSKKNLTDITGPIVLQTYRAIADYEKSSTSEMALKAGDMVDVVEKSENGWWFCQLKNKRGWVPAAYLEPMDGPDESEEQEPNYAGEVYTVQKSYTAVEEDELTLKEGDTIEVIHKLLDGWWVIRKDETTGYYPAMYLQKAGEVDTSVKSELRNRGAPPRRSTIRNVKSIHRQGRKQISQETYRRNSKKYIQKQQKMQGNFQNKANVIIEKKEPEDNKPKAQPAVPPRPSKDLILNRCTESTRSKIL
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(3183759..3183877,3184756..3184898,3186439..3186546,3187205..3187322,3188529..3188636,3189018..3189140,3189426..3189481,3189598..3189763,3190922..3190997,3191300..3191380,3191839..3191910))
location: region:3183759-3191910:-1
so has part: feature:3191839-3191910:-1:exon
so has part: feature:3191300-3191380:-1:exon
so has part: feature:3190922-3190997:-1:exon
so has part: feature:3189598-3189763:-1:exon
so has part: feature:3189426-3189481:-1:exon
so has part: feature:3189018-3189140:-1:exon
so has part: feature:3188529-3188636:-1:exon
so has part: feature:3187205-3187322:-1:exon
so has part: feature:3186439-3186546:-1:exon
so has part: feature:3184756-3184898:-1:exon
so has part: feature:3183759-3183877:-1:exon

XP_005056474.1
type: Protein
SIO_000068: ncbiprotein

position:3183759:-1
position: 3183759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3191910:-1
position: 3191910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3191839-3191910:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3191300-3191380:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3190922-3190997:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3189598-3189763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3189426-3189481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3189018-3189140:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3188529-3188636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3187205-3187322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3186439-3186546:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3184756-3184898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3183759-3183877:-1:exon

NCF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NCF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neutrophil cytosol factor 1 isoform X1
translation: MAPEIASKQTCFKRGPWVQSFNLFCPLKVGAMDSVSLGTEVWDPASICQWQQGEHRERSQAGAEEWVSQSVCSPGAILTDVPGSAPQKALKEMFPIESGDINIENRIIPHLPAPKWFDGQRSTQNRQGTLAEYCHTLVNLPHKISRCLHVVSFFKVRHDDMNPVTDSQIKKPEVFLLPKDSKKNLTDITGPIVLQTYRAIADYEKSSTSEMALKAGDMVDVVEKSENGWWFCQLKNKRGWVPAAYLEPMDGPDESEEQEPNYAGEVYTVQKSYTAVEEDELTLKEGDTIEVIHKLLDGWWVIRKDETTGYYPAMYLQKAGEVDTSVKSELRNRGAPPRRSTIRNVKSIHRQGRKQISQETYRRNSKKYIQKQQKMQGNFQNKANVIIEKKEPEDNKPKAQPAVPPRPSKDLILNRCTESTRSKIL
SIO_010081: NCF1
subclass of: SO_0000673
so part of: NCF1
location: complement(join(3183759..3183877,3184756..3184898,3186439..3186546,3187205..3187322,3188529..3188636,3189018..3189140,3189426..3189481,3189598..3189763,3190922..3191258))
location: region:3183759-3191258:-1
so has part: feature:3190922-3191258:-1:exon
so has part: feature:3189598-3189763:-1:exon
so has part: feature:3189426-3189481:-1:exon
so has part: feature:3189018-3189140:-1:exon
so has part: feature:3188529-3188636:-1:exon
so has part: feature:3187205-3187322:-1:exon
so has part: feature:3186439-3186546:-1:exon
so has part: feature:3184756-3184898:-1:exon
so has part: feature:3183759-3183877:-1:exon

XP_005056473.1
type: Protein
SIO_000068: ncbiprotein

position:3191258:-1
position: 3191258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3190922-3191258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3189598-3189763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3189426-3189481:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3189018-3189140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3188529-3188636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3187205-3187322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3186439-3186546:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3184756-3184898:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3183759-3183877:-1:exon

GTF2I
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3195084..3280024)
location: region:3195084-3280024:-1
so has part: feature:3195084-3280024:-1:exon
subclass of: SO_0000010

101806711
type: Gene
SIO_000068: ncbigene

position:3195084:-1
position: 3195084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3280024:-1
position: 3280024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3195084-3280024:-1:exon

GTF2I
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GTF2I
product: general transcription factor IIi
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016302878.1
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(3195084..3195948,3197503..3197569,3199689..3199727,3201076..3201147,3202521..3202549,3203454..3203637,3204425..3204508,3205387..3205497,3206064..3206116,3207073..3207256,3208076..3208141,3209731..3209823,3210972..3211055,3211697..3211755,3212242..3212425,3212921..3212992,3213636..3213694,3214008..3214191,3214912..3214995,3215480..3215532,3217110..3217293,3217798..3217863,3219995..3220096,3220731..3220793,3221127..3221240,3222696..3222758,3225809..3225922,3228316..3228378,3228701..3228805,3230773..3230835,3231747..3231809,3235414..3235527,3236062..3236124,3237878..3237982,3242689..3242751,3244097..3244201,3246728..3246790,3255341..3255463,3256713..3256778,3258159..3258218,3259464..3259541,3261599..3261642,3262345..3262393,3263398..3263426,3263618..3263801,3264159..3264293,3272482..3272620,3273975..3274080,3279604..3280024))
location: region:3195084-3280024:-1
so has part: feature:3279604-3280024:-1:exon
so has part: feature:3273975-3274080:-1:exon
so has part: feature:3272482-3272620:-1:exon
so has part: feature:3264159-3264293:-1:exon
so has part: feature:3263618-3263801:-1:exon
so has part: feature:3263398-3263426:-1:exon
so has part: feature:3262345-3262393:-1:exon
so has part: feature:3261599-3261642:-1:exon
so has part: feature:3259464-3259541:-1:exon
so has part: feature:3258159-3258218:-1:exon
so has part: feature:3256713-3256778:-1:exon
so has part: feature:3255341-3255463:-1:exon
so has part: feature:3246728-3246790:-1:exon
so has part: feature:3244097-3244201:-1:exon
so has part: feature:3242689-3242751:-1:exon
so has part: feature:3237878-3237982:-1:exon
so has part: feature:3236062-3236124:-1:exon
so has part: feature:3235414-3235527:-1:exon
so has part: feature:3231747-3231809:-1:exon
so has part: feature:3230773-3230835:-1:exon
so has part: feature:3228701-3228805:-1:exon
so has part: feature:3228316-3228378:-1:exon
so has part: feature:3225809-3225922:-1:exon
so has part: feature:3222696-3222758:-1:exon
so has part: feature:3221127-3221240:-1:exon
so has part: feature:3220731-3220793:-1:exon
so has part: feature:3219995-3220096:-1:exon
so has part: feature:3217798-3217863:-1:exon
so has part: feature:3217110-3217293:-1:exon
so has part: feature:3215480-3215532:-1:exon
so has part: feature:3214912-3214995:-1:exon
so has part: feature:3214008-3214191:-1:exon
so has part: feature:3213636-3213694:-1:exon
so has part: feature:3212921-3212992:-1:exon
so has part: feature:3212242-3212425:-1:exon
so has part: feature:3211697-3211755:-1:exon
so has part: feature:3210972-3211055:-1:exon
so has part: feature:3209731-3209823:-1:exon
so has part: feature:3208076-3208141:-1:exon
so has part: feature:3207073-3207256:-1:exon
so has part: feature:3206064-3206116:-1:exon
so has part: feature:3205387-3205497:-1:exon
so has part: feature:3204425-3204508:-1:exon
so has part: feature:3203454-3203637:-1:exon
so has part: feature:3202521-3202549:-1:exon
so has part: feature:3201076-3201147:-1:exon
so has part: feature:3199689-3199727:-1:exon
so has part: feature:3197503-3197569:-1:exon
so has part: feature:3195084-3195948:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3279604-3280024:-1:exon

position:3279604:-1
position: 3279604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3273975-3274080:-1:exon

position:3273975:-1
position: 3273975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3274080:-1
position: 3274080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3272482-3272620:-1:exon

position:3272482:-1
position: 3272482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3272620:-1
position: 3272620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3264159-3264293:-1:exon

position:3264159:-1
position: 3264159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3264293:-1
position: 3264293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3263618-3263801:-1:exon

position:3263618:-1
position: 3263618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263801:-1
position: 3263801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3263398-3263426:-1:exon

position:3263398:-1
position: 3263398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263426:-1
position: 3263426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3262345-3262393:-1:exon

position:3262345:-1
position: 3262345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262393:-1
position: 3262393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3261599-3261642:-1:exon

position:3261599:-1
position: 3261599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261642:-1
position: 3261642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3259464-3259541:-1:exon

position:3259464:-1
position: 3259464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3259541:-1
position: 3259541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3258159-3258218:-1:exon

position:3258159:-1
position: 3258159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258218:-1
position: 3258218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3256713-3256778:-1:exon

position:3256713:-1
position: 3256713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3256778:-1
position: 3256778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3255341-3255463:-1:exon

position:3255341:-1
position: 3255341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3255463:-1
position: 3255463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3246728-3246790:-1:exon

position:3246728:-1
position: 3246728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3246790:-1
position: 3246790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3244097-3244201:-1:exon

position:3244097:-1
position: 3244097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3244201:-1
position: 3244201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3242689-3242751:-1:exon

position:3242689:-1
position: 3242689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3242751:-1
position: 3242751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3237878-3237982:-1:exon

position:3237878:-1
position: 3237878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3237982:-1
position: 3237982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3236062-3236124:-1:exon

position:3236062:-1
position: 3236062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3236124:-1
position: 3236124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3235414-3235527:-1:exon

position:3235414:-1
position: 3235414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3235527:-1
position: 3235527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3231747-3231809:-1:exon

position:3231747:-1
position: 3231747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3231809:-1
position: 3231809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3230773-3230835:-1:exon

position:3230773:-1
position: 3230773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3230835:-1
position: 3230835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3228701-3228805:-1:exon

position:3228701:-1
position: 3228701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3228805:-1
position: 3228805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3228316-3228378:-1:exon

position:3228316:-1
position: 3228316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3228378:-1
position: 3228378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3225809-3225922:-1:exon

position:3225809:-1
position: 3225809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3225922:-1
position: 3225922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3222696-3222758:-1:exon

position:3222696:-1
position: 3222696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3222758:-1
position: 3222758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3221127-3221240:-1:exon

position:3221127:-1
position: 3221127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3221240:-1
position: 3221240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3220731-3220793:-1:exon

position:3220731:-1
position: 3220731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3220793:-1
position: 3220793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3219995-3220096:-1:exon

position:3219995:-1
position: 3219995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3220096:-1
position: 3220096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3217798-3217863:-1:exon

position:3217798:-1
position: 3217798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3217863:-1
position: 3217863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3217110-3217293:-1:exon

position:3217110:-1
position: 3217110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3217293:-1
position: 3217293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3215480-3215532:-1:exon

position:3215480:-1
position: 3215480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3215532:-1
position: 3215532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3214912-3214995:-1:exon

position:3214912:-1
position: 3214912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3214995:-1
position: 3214995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3214008-3214191:-1:exon

position:3214008:-1
position: 3214008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3214191:-1
position: 3214191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3213636-3213694:-1:exon

position:3213636:-1
position: 3213636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3213694:-1
position: 3213694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3212921-3212992:-1:exon

position:3212921:-1
position: 3212921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212992:-1
position: 3212992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3212242-3212425:-1:exon

position:3212242:-1
position: 3212242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3212425:-1
position: 3212425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:3211697-3211755:-1:exon

position:3211697:-1
position: 3211697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211755:-1
position: 3211755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:3210972-3211055:-1:exon

position:3210972:-1
position: 3210972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3211055:-1
position: 3211055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:3209731-3209823:-1:exon

position:3209731:-1
position: 3209731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3209823:-1
position: 3209823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:3208076-3208141:-1:exon

position:3208076:-1
position: 3208076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3208141:-1
position: 3208141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:3207073-3207256:-1:exon

position:3207073:-1
position: 3207073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3207256:-1
position: 3207256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:3206064-3206116:-1:exon

position:3206064:-1
position: 3206064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3206116:-1
position: 3206116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:3205387-3205497:-1:exon

position:3205387:-1
position: 3205387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3205497:-1
position: 3205497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:3204425-3204508:-1:exon

position:3204425:-1
position: 3204425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3204508:-1
position: 3204508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:3203454-3203637:-1:exon

position:3203454:-1
position: 3203454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203637:-1
position: 3203637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:3202521-3202549:-1:exon

position:3202521:-1
position: 3202521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3202549:-1
position: 3202549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:3201076-3201147:-1:exon

position:3201076:-1
position: 3201076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3201147:-1
position: 3201147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:3199689-3199727:-1:exon

position:3199689:-1
position: 3199689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3199727:-1
position: 3199727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:3197503-3197569:-1:exon

position:3197503:-1
position: 3197503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3197569:-1
position: 3197569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:3195084-3195948:-1:exon

position:3195948:-1
position: 3195948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2I
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GTF2I
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I
translation: MAQTIARATSLHVEESLESRMVVTFLMSGLESMCKELAKSKAEIACIGVYEKNVFVVGTERGKAFVNSREEIKTEFIEYCVTEEDRIAKLQKKRATPPVNRQTVDAVDLEALRKSVDDFFCFCYGKALGKSSMVPVPYEEIQKNQSVVIVQGLPKGLTLQHPSNYDVSTLKWILENKSEISFSINRPFLEPVKCIGADMTDPSHPVIPPCGSSPPVQVKTEPNKDSGIPSKMSTIAMKQETDDPNYYQFGASAGPSKTSEIEEEIAPVKSYTDSSQQHGMSEFRMDTEPEITSDDDVDDDDDDDDYPPPEKRRKISELENQASNIVGRTAEEFSFDPPQHELSGPSEKPEVEVTLEDDDDDYPPLDKRQKSTKSANEAASTQRREGKEFSSDSSQHDSSESSSDSEPEITTEDDDDDEYVPPSRRPRSRRSNRASNTGRRKGKHSSSDSSQHYFSGISETPGLEVTVQADNDDDDDNLPQDMTINMTYSANEADNSGGRKVDAFSSDSSQHELSEPGVKPEVEVTLEDSSQHELSEPGVKPEVEVTLEADDGDDNLPPDKKLKKIESGSEAANTGRRTEVCSSDSSLHDFSVIGDRPELEVTVEAADHDDDDNLSHDMRLNSSKSFIEADKNGGRKTEEFNFDSSLHDVSETSNRPELEVIVEADDDDEDDYLPLDMSVKNIESASEADHTGRRKAREFNSDTSQHEWSEGSENSEDDFSSGDDVDYLPSEKRRRRTRSGSGAFNTARRRGRQFNFDKWNMRISDLRTEVEQVFAEKYAEAIKAEGPVTIPYGLFQSHSEDLYVEGLPEGIPFRRPTTYGIPRLERILLARDQIQFVIKKPELLNLKDVPVDKTASGVSNPAREEWYARITRLRKTVDQLFCKSYGKALGSSEPKAVPYKIFEAHPTDLYVEGLPEKVAFRSPSWYGVTCLEKIIEAGNRIKFVIKRPELLHNASNKVTQPRSNSQGKDDWNCKITKLRNDVEDLFSKKFGEALGLSESVKVPYSVFESNPDALVVEGLPEGVPFRSPTWFGIPRLERITRASQKIKFVIKKLDLVISHLPLRVANKLKTKASSPRSSRRSRSSSENSSIPEIEVTVNDSPEKAQTTNSQNNGSNNKNVNQQQGRGGFSFELWSSKIANLKKQVENLFNEKCGEALGLNGPMRVPYGLFESFPEVFQVEGLPEGVPFRQPSTFGIPRLEKILRNRSKIKFIIKKPEMLEEAVKESSGKSSKRKNNSSSNASTARTTKNTAVNKTTGVENLNIIQVTIPGDESERLPKVENARQLREQVNDLFSQKFGEATGMNFPVKVPYRKITNNPGCVLVDGMPPGVAFKAPSYLEISSMKKILESAESIKFTVVRPFPGLVINNHLLEEAEAEAPAPSTAPAAATALPEPGEPSHIEVSVGDNTETDFK
SIO_010081: GTF2I
subclass of: SO_0000673
so part of: GTF2I
location: complement(join(3197544..3197569,3199689..3199727,3201076..3201147,3202521..3202549,3203454..3203637,3204425..3204508,3205387..3205497,3206064..3206116,3207073..3207256,3208076..3208141,3209731..3209823,3210972..3211055,3211697..3211755,3212242..3212425,3212921..3212992,3213636..3213694,3214008..3214191,3214912..3214995,3215480..3215532,3217110..3217293,3217798..3217863,3219995..3220096,3220731..3220793,3221127..3221240,3222696..3222758,3225809..3225922,3228316..3228378,3228701..3228805,3230773..3230835,3231747..3231809,3235414..3235527,3236062..3236124,3237878..3237982,3242689..3242751,3244097..3244201,3246728..3246790,3255341..3255463,3256713..3256778,3258159..3258218,3259464..3259541,3261599..3261642,3262345..3262393,3263398..3263426,3263618..3263801,3264159..3264293,3272482..3272620,3273975..3274073))
location: region:3197544-3274073:-1
so has part: feature:3273975-3274073:-1:exon
so has part: feature:3272482-3272620:-1:exon
so has part: feature:3264159-3264293:-1:exon
so has part: feature:3263618-3263801:-1:exon
so has part: feature:3263398-3263426:-1:exon
so has part: feature:3262345-3262393:-1:exon
so has part: feature:3261599-3261642:-1:exon
so has part: feature:3259464-3259541:-1:exon
so has part: feature:3258159-3258218:-1:exon
so has part: feature:3256713-3256778:-1:exon
so has part: feature:3255341-3255463:-1:exon
so has part: feature:3246728-3246790:-1:exon
so has part: feature:3244097-3244201:-1:exon
so has part: feature:3242689-3242751:-1:exon
so has part: feature:3237878-3237982:-1:exon
so has part: feature:3236062-3236124:-1:exon
so has part: feature:3235414-3235527:-1:exon
so has part: feature:3231747-3231809:-1:exon
so has part: feature:3230773-3230835:-1:exon
so has part: feature:3228701-3228805:-1:exon
so has part: feature:3228316-3228378:-1:exon
so has part: feature:3225809-3225922:-1:exon
so has part: feature:3222696-3222758:-1:exon
so has part: feature:3221127-3221240:-1:exon
so has part: feature:3220731-3220793:-1:exon
so has part: feature:3219995-3220096:-1:exon
so has part: feature:3217798-3217863:-1:exon
so has part: feature:3217110-3217293:-1:exon
so has part: feature:3215480-3215532:-1:exon
so has part: feature:3214912-3214995:-1:exon
so has part: feature:3214008-3214191:-1:exon
so has part: feature:3213636-3213694:-1:exon
so has part: feature:3212921-3212992:-1:exon
so has part: feature:3212242-3212425:-1:exon
so has part: feature:3211697-3211755:-1:exon
so has part: feature:3210972-3211055:-1:exon
so has part: feature:3209731-3209823:-1:exon
so has part: feature:3208076-3208141:-1:exon
so has part: feature:3207073-3207256:-1:exon
so has part: feature:3206064-3206116:-1:exon
so has part: feature:3205387-3205497:-1:exon
so has part: feature:3204425-3204508:-1:exon
so has part: feature:3203454-3203637:-1:exon
so has part: feature:3202521-3202549:-1:exon
so has part: feature:3201076-3201147:-1:exon
so has part: feature:3199689-3199727:-1:exon
so has part: feature:3197544-3197569:-1:exon

XP_016158364.1
type: Protein
SIO_000068: ncbiprotein

position:3197544:-1
position: 3197544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3274073:-1
position: 3274073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3273975-3274073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3272482-3272620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3264159-3264293:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3263618-3263801:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3263398-3263426:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3262345-3262393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3261599-3261642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3259464-3259541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3258159-3258218:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3256713-3256778:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3255341-3255463:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3246728-3246790:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3244097-3244201:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3242689-3242751:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3237878-3237982:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3236062-3236124:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3235414-3235527:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3231747-3231809:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3230773-3230835:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3228701-3228805:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3228316-3228378:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3225809-3225922:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3222696-3222758:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3221127-3221240:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3220731-3220793:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3219995-3220096:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3217798-3217863:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3217110-3217293:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3215480-3215532:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3214912-3214995:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3214008-3214191:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3213636-3213694:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3212921-3212992:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:3212242-3212425:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:3211697-3211755:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:3210972-3211055:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:3209731-3209823:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:3208076-3208141:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:3207073-3207256:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:3206064-3206116:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:3205387-3205497:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:3204425-3204508:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:3203454-3203637:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:3202521-3202549:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:3201076-3201147:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:3199689-3199727:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:3197544-3197569:-1:exon

GTF2IRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3295148..3370329)
location: region:3295148-3370329:-1
so has part: feature:3295148-3370329:-1:exon
subclass of: SO_0000010

101806911
type: Gene
SIO_000068: ncbigene

position:3295148:-1
position: 3295148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370329:-1
position: 3370329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3295148-3370329:-1:exon

GTF2IRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GTF2IRD1
product: GTF2I repeat domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016303091.1
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295148..3295342,3296099..3296235,3297184..3297221,3297670..3297862,3300177..3300254,3304329..3304376,3311185..3311213,3311920..3312103,3312527..3312610,3313417..3313482,3314800..3314858,3316001..3316184,3318257..3318322,3318795..3318854,3319323..3319412,3321012..3321092,3322783..3322820,3324745..3324865,3327703..3327728,3328912..3329095,3330453..3330536,3331372..3331461,3332770..3333050,3334551..3334734,3338365..3338511,3341454..3341595,3344990..3345118,3370253..3370329))
location: region:3295148-3370329:-1
so has part: feature:3370253-3370329:-1:exon
so has part: feature:3344990-3345118:-1:exon
so has part: feature:3341454-3341595:-1:exon
so has part: feature:3338365-3338511:-1:exon
so has part: feature:3334551-3334734:-1:exon
so has part: feature:3332770-3333050:-1:exon
so has part: feature:3331372-3331461:-1:exon
so has part: feature:3330453-3330536:-1:exon
so has part: feature:3328912-3329095:-1:exon
so has part: feature:3327703-3327728:-1:exon
so has part: feature:3324745-3324865:-1:exon
so has part: feature:3322783-3322820:-1:exon
so has part: feature:3321012-3321092:-1:exon
so has part: feature:3319323-3319412:-1:exon
so has part: feature:3318795-3318854:-1:exon
so has part: feature:3318257-3318322:-1:exon
so has part: feature:3316001-3316184:-1:exon
so has part: feature:3314800-3314858:-1:exon
so has part: feature:3313417-3313482:-1:exon
so has part: feature:3312527-3312610:-1:exon
so has part: feature:3311920-3312103:-1:exon
so has part: feature:3311185-3311213:-1:exon
so has part: feature:3304329-3304376:-1:exon
so has part: feature:3300177-3300254:-1:exon
so has part: feature:3297670-3297862:-1:exon
so has part: feature:3297184-3297221:-1:exon
so has part: feature:3296099-3296235:-1:exon
so has part: feature:3295148-3295342:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3370253-3370329:-1:exon

position:3370253:-1
position: 3370253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3344990-3345118:-1:exon

position:3344990:-1
position: 3344990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3345118:-1
position: 3345118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3341454-3341595:-1:exon

position:3341454:-1
position: 3341454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3341595:-1
position: 3341595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3338365-3338511:-1:exon

position:3338365:-1
position: 3338365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3338511:-1
position: 3338511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3334551-3334734:-1:exon

position:3334551:-1
position: 3334551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3334734:-1
position: 3334734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3332770-3333050:-1:exon

position:3332770:-1
position: 3332770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3333050:-1
position: 3333050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3331372-3331461:-1:exon

position:3331372:-1
position: 3331372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3331461:-1
position: 3331461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3330453-3330536:-1:exon

position:3330453:-1
position: 3330453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3330536:-1
position: 3330536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3328912-3329095:-1:exon

position:3328912:-1
position: 3328912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3329095:-1
position: 3329095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3327703-3327728:-1:exon

position:3327703:-1
position: 3327703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3327728:-1
position: 3327728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3324745-3324865:-1:exon

position:3324745:-1
position: 3324745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3324865:-1
position: 3324865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3322783-3322820:-1:exon

position:3322783:-1
position: 3322783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3322820:-1
position: 3322820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3321012-3321092:-1:exon

position:3321012:-1
position: 3321012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3321092:-1
position: 3321092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3319323-3319412:-1:exon

position:3319323:-1
position: 3319323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3319412:-1
position: 3319412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3318795-3318854:-1:exon

position:3318795:-1
position: 3318795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3318854:-1
position: 3318854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3318257-3318322:-1:exon

position:3318257:-1
position: 3318257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3318322:-1
position: 3318322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3316001-3316184:-1:exon

position:3316001:-1
position: 3316001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3316184:-1
position: 3316184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3314800-3314858:-1:exon

position:3314800:-1
position: 3314800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3314858:-1
position: 3314858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3313417-3313482:-1:exon

position:3313417:-1
position: 3313417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3313482:-1
position: 3313482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3312527-3312610:-1:exon

position:3312527:-1
position: 3312527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312610:-1
position: 3312610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3311920-3312103:-1:exon

position:3311920:-1
position: 3311920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312103:-1
position: 3312103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3311185-3311213:-1:exon

position:3311185:-1
position: 3311185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3311213:-1
position: 3311213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3304329-3304376:-1:exon

position:3304329:-1
position: 3304329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3304376:-1
position: 3304376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3300177-3300254:-1:exon

position:3300177:-1
position: 3300177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3300254:-1
position: 3300254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3297670-3297862:-1:exon

position:3297670:-1
position: 3297670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3297862:-1
position: 3297862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3297184-3297221:-1:exon

position:3297184:-1
position: 3297184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3297221:-1
position: 3297221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3296099-3296235:-1:exon

position:3296099:-1
position: 3296099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3296235:-1
position: 3296235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3295148-3295342:-1:exon

position:3295342:-1
position: 3295342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTF2IRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GTF2IRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: general transcription factor II-I repeat domain-containing protein 1
translation: MPVNMALAGKPLDVTLTTSRADQWNMVFPQRDEVITSLVSALDSMCSALAKLNAEVACIAVHEESAFVLGTDKGRLFLSARKELQADFQKFCRIQQRKEQDAEVQKKAKECGQRVLRVSPDQGSDVYLLRKMVEEVFDVLYSEAMGKSSVVPLPYERFLKEPGSLAVTGLPEGISFKKPLEYDVKSLMAILEHSHSIRFRLKRPADEPSREPNPNIELTCSSLASKGSRDSGASGPVAKASAQDGPSIAITNFLYGVSLPAPASIDLKQEVSPGLPGPTAVAEMKVPSSQEYSDCCGQKSSVSGGPLIQNVHSSKRILFSIVHDKTDKWDSFIKETEDINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRILEERHNIHFVIKRMFDERIFTGSKFTKDPTKLEPCSPPREISPEPHRGATLELVGTSQASSRSEKCNVSEGCEPGTSGELGGIRQIKLEPDELNIIQITVPDRSPGSVEMHDPVPTHVASDESRYILETAPETEKGSSEESRHEEKQMEGSDGIGDILSHLRKQVEILFNSRYAKAIGISEPVKVPYSKFLMYPEDLFVVGLPEGILLRRPNCFGIAKLKKILQASNNIQFVIKRPELLAEGVKESVSDSPAAKAADERDSSEALLEDAVKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPAPRRITSLEKAYAALNDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPVMVPYKLIRDSPESVEVTGLPDDIPFRNPNTYDIHRLEKILKARESIRIVIINQLQPFAEICTEAKQTEKDISVPKRKRKRISEGNSVSSSSSSSSSSSSNMESTSSTNQISLVQWPMNMYMLDYGGLNVQIPGPINY
SIO_010081: GTF2IRD1
subclass of: SO_0000673
so part of: GTF2IRD1
location: complement(join(3295268..3295342,3296099..3296235,3297184..3297221,3297670..3297862,3300177..3300254,3304329..3304376,3311185..3311213,3311920..3312103,3312527..3312610,3313417..3313482,3314800..3314858,3316001..3316184,3318257..3318322,3318795..3318854,3319323..3319412,3321012..3321092,3322783..3322820,3324745..3324865,3327703..3327728,3328912..3329095,3330453..3330536,3331372..3331461,3332770..3333050,3334551..3334734,3338365..3338511,3341454..3341595,3344990..3345118,3370253..3370258))
location: region:3295268-3370258:-1
so has part: feature:3370253-3370258:-1:exon
so has part: feature:3344990-3345118:-1:exon
so has part: feature:3341454-3341595:-1:exon
so has part: feature:3338365-3338511:-1:exon
so has part: feature:3334551-3334734:-1:exon
so has part: feature:3332770-3333050:-1:exon
so has part: feature:3331372-3331461:-1:exon
so has part: feature:3330453-3330536:-1:exon
so has part: feature:3328912-3329095:-1:exon
so has part: feature:3327703-3327728:-1:exon
so has part: feature:3324745-3324865:-1:exon
so has part: feature:3322783-3322820:-1:exon
so has part: feature:3321012-3321092:-1:exon
so has part: feature:3319323-3319412:-1:exon
so has part: feature:3318795-3318854:-1:exon
so has part: feature:3318257-3318322:-1:exon
so has part: feature:3316001-3316184:-1:exon
so has part: feature:3314800-3314858:-1:exon
so has part: feature:3313417-3313482:-1:exon
so has part: feature:3312527-3312610:-1:exon
so has part: feature:3311920-3312103:-1:exon
so has part: feature:3311185-3311213:-1:exon
so has part: feature:3304329-3304376:-1:exon
so has part: feature:3300177-3300254:-1:exon
so has part: feature:3297670-3297862:-1:exon
so has part: feature:3297184-3297221:-1:exon
so has part: feature:3296099-3296235:-1:exon
so has part: feature:3295268-3295342:-1:exon

XP_016158577.1
type: Protein
SIO_000068: ncbiprotein

position:3295268:-1
position: 3295268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370258:-1
position: 3370258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3370253-3370258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3344990-3345118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3341454-3341595:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3338365-3338511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3334551-3334734:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3332770-3333050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3331372-3331461:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3330453-3330536:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3328912-3329095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3327703-3327728:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3324745-3324865:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3322783-3322820:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3321012-3321092:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3319323-3319412:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3318795-3318854:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3318257-3318322:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3316001-3316184:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3314800-3314858:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3313417-3313482:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3312527-3312610:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3311920-3312103:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3311185-3311213:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3304329-3304376:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3300177-3300254:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3297670-3297862:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3297184-3297221:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3296099-3296235:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3295268-3295342:-1:exon

MKS1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MKS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <3385760..3398823
location: region:3385760-3398823:1
so has part: feature:3385760-3398823:1:exon
subclass of: SO_0000010

101810690
type: Gene
SIO_000068: ncbigene

position:3385760:1
position: 3385760
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3398823:1
position: 3398823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3385760-3398823:1:exon

MKS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MKS1
product: Meckel syndrome, type 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005056439.1
SIO_010081: MKS1
subclass of: SO_0000673
so part of: MKS1
location: join(<3385760..3385836,3385908..3386124,3386873..3387028,3387428..3387525,3387722..3387850,3388169..3388273,3388980..3389088,3389949..3390005,3390908..3390950,3391442..3391504,3392539..3392609,3393363..3393426,3394879..3394986,3395508..3395641,3396318..3396400,3396491..3396588,3397063..3398823)
location: region:3385760-3398823:1
so has part: feature:3385760-3385836:1:exon
so has part: feature:3385908-3386124:1:exon
so has part: feature:3386873-3387028:1:exon
so has part: feature:3387428-3387525:1:exon
so has part: feature:3387722-3387850:1:exon
so has part: feature:3388169-3388273:1:exon
so has part: feature:3388980-3389088:1:exon
so has part: feature:3389949-3390005:1:exon
so has part: feature:3390908-3390950:1:exon
so has part: feature:3391442-3391504:1:exon
so has part: feature:3392539-3392609:1:exon
so has part: feature:3393363-3393426:1:exon
so has part: feature:3394879-3394986:1:exon
so has part: feature:3395508-3395641:1:exon
so has part: feature:3396318-3396400:1:exon
so has part: feature:3396491-3396588:1:exon
so has part: feature:3397063-3398823:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3385760-3385836:1:exon

position:3385836:1
position: 3385836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3385908-3386124:1:exon

position:3385908:1
position: 3385908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3386124:1
position: 3386124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3386873-3387028:1:exon

position:3386873:1
position: 3386873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3387028:1
position: 3387028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3387428-3387525:1:exon

position:3387428:1
position: 3387428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3387525:1
position: 3387525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3387722-3387850:1:exon

position:3387722:1
position: 3387722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3387850:1
position: 3387850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3388169-3388273:1:exon

position:3388169:1
position: 3388169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3388273:1
position: 3388273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3388980-3389088:1:exon

position:3388980:1
position: 3388980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3389088:1
position: 3389088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3389949-3390005:1:exon

position:3389949:1
position: 3389949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390005:1
position: 3390005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3390908-3390950:1:exon

position:3390908:1
position: 3390908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390950:1
position: 3390950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3391442-3391504:1:exon

position:3391442:1
position: 3391442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3391504:1
position: 3391504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3392539-3392609:1:exon

position:3392539:1
position: 3392539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3392609:1
position: 3392609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3393363-3393426:1:exon

position:3393363:1
position: 3393363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3393426:1
position: 3393426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3394879-3394986:1:exon