Ficedula albicollis isolate OC2 chromosome 13, FicAlb1.5, whole genome shotgun sequence.
type: Entry
definition: Ficedula albicollis isolate OC2 chromosome 13, FicAlb1.5, whole genome shotgun sequence.
sequence version: NC_021685.1
sequence date: 2016-04-20
sequence: sequence
division: CON
label: NC_021685.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA208061
dblink: SAMN02981387
keyword: WGS
keyword: RefSeq
source: Ficedula albicollis (collared flycatcher)
organism: Ficedula albicollis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
reference: 1
references: 23103876
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002002.1.\nAssembly name: FicAlb1.5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Uppsala University on 2013/06/24.\nThe original whole-genome shotgun project has the accession\nAGTO00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: FicAlb1.5\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina GAII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Ficedula albicollis Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 18641552
topology: linear
so has quality: SO_0000987
location: 1..18641552
location: region:1-18641552:1
RO_0002162: 59894

NC_021685
type: RefSeq
SIO_000068: refseq

PRJNA208061
type: BioProject
SIO_000068: bioproject

SAMN02981387
type: BioSample
SIO_000068: biosample

1
title: The genomic landscape of species divergence in Ficedula flycatchers
author: Ellegren, H.
author: Smeds, L.
author: Burri, R.
author: Olason, P.I.
author: Backstrom, N.
author: Kawakami, T.
author: Kunstner, A.
author: Makinen, H.
author: Nadachowska-Brzyska, K.
author: Qvarnstrom, A.
author: Uebbing, S.
author: Wolf, J.B.
journal: Nature
volume: 491
issue: 7426
pages: 756-760
year: 2012
pubmed: 23103876

23103876
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18641552:1
position: 18641552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-18641552:1:source
so part of: sequence
organism: Ficedula albicollis
mol type: genomic DNA
isolate: OC2
chromosome: 13
sex: male
country: Sweden: Oland
collection date: 2009

59894
type: Taxonomy
SIO_000068: taxonomy

KCTD16
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: KCTD16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(79096..141189)
location: region:79096-141189:-1
so has part: feature:79096-141189:-1:exon
subclass of: SO_0000010

101819383
type: Gene
SIO_000068: ncbigene

position:79096:-1
position: 79096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141189:-1
position: 141189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79096-141189:-1:exon

KCTD16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KCTD16
product: potassium channel tetramerization domain containing 16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005053716.1
SIO_010081: KCTD16
subclass of: SO_0000673
so part of: KCTD16
location: complement(join(79096..79949,140058..141189))
location: region:79096-141189:-1
so has part: feature:140058-141189:-1:exon
so has part: feature:79096-79949:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140058-141189:-1:exon

position:140058:-1
position: 140058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79096-79949:-1:exon

position:79949:-1
position: 79949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCTD16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KCTD16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD16
translation: MALSGNCRTYLPAREQGTGLHSFPEVVELNVGGQVYFTRHSTLVGTPHSLLWKMFTPKRDTANDLAKDSKGRFFIDRDGFLFRYILDYLRDKQVVLPDHFPEKGRLKREAEYFQLPDLVKLLTPDDSKQSPDDYCHSDYEEVSQGSDTRICPPSLLPPDRKWGFITIGYRGSCTIGRESQADAKFRRVPRILVCGRISLVKEVFGESLNESRDPDRAPERYTSRFYLKFKHLERAFDMLSECGFHMVACNSSVTASFVNQYTDDKVWSSYTEYVFYREPSRWSPSHCECCCKNGKGAKEGESGTSCNELSTSSCDSQSEASSPQETVICGPVSRQPHIQTLDRARKGPVQLLQHAESRRKSDLLRTLTAGSREPAAGKKKAAKEKLSVEEELEKCIQDFLKIKIPERFPERKHPWQSELLRKYHL
SIO_010081: KCTD16
subclass of: SO_0000673
so part of: KCTD16
location: complement(join(79501..79949,140058..140886))
location: region:79501-140886:-1
so has part: feature:140058-140886:-1:exon
so has part: feature:79501-79949:-1:exon

XP_005053773.1
type: Protein
SIO_000068: ncbiprotein

position:79501:-1
position: 79501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140886:-1
position: 140886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140058-140886:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79501-79949:-1:exon

YIPF5
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 150794..157708
location: region:150794-157708:1
so has part: feature:150794-157708:1:exon
subclass of: SO_0000010

101819184
type: Gene
SIO_000068: ncbigene

position:150794:1
position: 150794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157708:1
position: 157708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150794-157708:1:exon

YIPF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: YIPF5
product: Yip1 domain family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005053715.2
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(150794..150950,152044..152216,153099..153244,155808..155989,156685..157708)
location: region:150794-157708:1
so has part: feature:150794-150950:1:exon
so has part: feature:152044-152216:1:exon
so has part: feature:153099-153244:1:exon
so has part: feature:155808-155989:1:exon
so has part: feature:156685-157708:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:150794-150950:1:exon

position:150950:1
position: 150950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:152044-152216:1:exon

position:152044:1
position: 152044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152216:1
position: 152216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153099-153244:1:exon

position:153099:1
position: 153099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153244:1
position: 153244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155808-155989:1:exon

position:155808:1
position: 155808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155989:1
position: 155989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156685-157708:1:exon

position:156685:1
position: 156685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YIPF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: YIPF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein YIPF5
translation: MSGFDGFNTDFFQTSYSIEDQAQPYDYSRQPYSKHYGGYEYPQQAGFVPPDMMQQPQPYTGQIYQPTQGYTPASAQSFYGSNFEDEPPLLEELGINFDHIWQKTLTVLHPLKVADGNIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGCLAMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAILFSLQGVMGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF
SIO_010081: YIPF5
subclass of: SO_0000673
so part of: YIPF5
location: join(150850..150950,152044..152216,153099..153244,155808..155989,156685..156847)
location: region:150850-156847:1
so has part: feature:150850-150950:1:exon
so has part: feature:152044-152216:1:exon
so has part: feature:153099-153244:1:exon
so has part: feature:155808-155989:1:exon
so has part: feature:156685-156847:1:exon

XP_005053772.1
type: Protein
SIO_000068: ncbiprotein

position:150850:1
position: 150850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156847:1
position: 156847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:150850-150950:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:152044-152216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153099-153244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155808-155989:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156685-156847:1:exon

LOC101812649
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 243512..244519
location: region:243512-244519:1
so has part: feature:243512-244519:1:exon
subclass of: SO_0000010

101812649
type: Gene
SIO_000068: ncbigene

position:243512:1
position: 243512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244519:1
position: 244519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243512-244519:1:exon

LOC101812649
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812649
product: uncharacterized LOC101812649
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005053762.1
SIO_010081: LOC101812649
subclass of: SO_0000673
so part of: LOC101812649
location: 243512..244519
location: region:243512-244519:1
so has part: feature:243512-244519:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243512-244519:1:exon

LOC101812649
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101812649
translation: MRCGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGTQKVLEALMECGRGKVLEALMECGRGKVLEALMECGRGKVLEALMECGRGKVLEALMECGTQKVLEALMEYGRRKVLEALGCGRHHSQGKF
SIO_010081: LOC101812649
subclass of: SO_0000673
so part of: LOC101812649
location: 243512..244519
location: region:243512-244519:1
so has part: feature:243512-244519:1:exon

XP_005053819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:243512-244519:1:exon

NR3C1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 294616..354716
location: region:294616-354716:1
so has part: feature:294616-354716:1:exon
subclass of: SO_0000010

101818724
type: Gene
SIO_000068: ncbigene

position:294616:1
position: 294616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354716:1
position: 354716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:294616-354716:1:exon

NR3C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NR3C1
product: nuclear receptor subfamily 3 group C member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301603.1
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(294616..294771,295486..295793,295978..296319,296485..297008,330267..330430,335972..336088,341764..342042,345658..345802,349724..349854,353142..353299,354171..354716)
location: region:294616-354716:1
so has part: feature:294616-294771:1:exon
so has part: feature:295486-295793:1:exon
so has part: feature:295978-296319:1:exon
so has part: feature:296485-297008:1:exon
so has part: feature:330267-330430:1:exon
so has part: feature:335972-336088:1:exon
so has part: feature:341764-342042:1:exon
so has part: feature:345658-345802:1:exon
so has part: feature:349724-349854:1:exon
so has part: feature:353142-353299:1:exon
so has part: feature:354171-354716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:294616-294771:1:exon

position:294771:1
position: 294771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295486-295793:1:exon

position:295486:1
position: 295486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295793:1
position: 295793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:295978-296319:1:exon

position:295978:1
position: 295978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296319:1
position: 296319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296485-297008:1:exon

position:296485:1
position: 296485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297008:1
position: 297008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:330267-330430:1:exon

position:330267:1
position: 330267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330430:1
position: 330430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:335972-336088:1:exon

position:335972:1
position: 335972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336088:1
position: 336088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:341764-342042:1:exon

position:341764:1
position: 341764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342042:1
position: 342042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:345658-345802:1:exon

position:345658:1
position: 345658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345802:1
position: 345802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:349724-349854:1:exon

position:349724:1
position: 349724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349854:1
position: 349854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:353142-353299:1:exon

position:353142:1
position: 353142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353299:1
position: 353299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:354171-354716:1:exon

position:354171:1
position: 354171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR3C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NR3C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucocorticoid receptor
translation: MDSKELLNPLDQDETRKNALISTKGGIVMDFHPPFRGGATVQAPVSASPLPASSQSESSQQPALADFPKGLGNNVPQPDLSKAVSLSMGLYMGETDAKVMGNDLGFSQQGQIGISSGETDFRLLEESIASLNKSSSLAEGAKGSAASEAPDFPGMAGRGGAAEPGAAVQSQVGSNGGTLFSEDQSTLDILQDLELPPVSPGKEPNGSPWRLDPLLDDGGLLSPISDDAAFLLEGSLGEDCKPPLLSDTKPKINDRGDLLPSSKMPMPQVKTEKEDYIELHTPGSIKQENTGPLYCQANFGSNLLGTKVSAISIHGVSTSGGQMYHYDLNTASLSQQQDQKPIFNIIPSLPAGSENWNRCQGSGDEALAPLGTLNLSGRPAFSNGYSSPGMRSDVSSSPSTTSATTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGMNLEARKTKKKIKGLQQGGAAGAREAPEAAGSKSLVPASLPQLTPTLVSLLEVIEPEVLYSGYDSSLPDSSWRILSTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAFALGWRSYKQSNGNLLCFAPDLIINEQRMNLPCMYEQCKHMLMVARELSRLQVSYEEYLCMKTLLLLSTIPKEGLKSQSLFEEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMHDVVENLLSFCFQTFLDKSMSIEFPEMLAEIISNQIPKYSNGNIKKLLFHQK
SIO_010081: NR3C1
subclass of: SO_0000673
so part of: NR3C1
location: join(295500..295793,295978..296319,296485..297008,330267..330430,335972..336088,341764..342042,345658..345802,349724..349854,353142..353299,354171..354323)
location: region:295500-354323:1
so has part: feature:295500-295793:1:exon
so has part: feature:295978-296319:1:exon
so has part: feature:296485-297008:1:exon
so has part: feature:330267-330430:1:exon
so has part: feature:335972-336088:1:exon
so has part: feature:341764-342042:1:exon
so has part: feature:345658-345802:1:exon
so has part: feature:349724-349854:1:exon
so has part: feature:353142-353299:1:exon
so has part: feature:354171-354323:1:exon

XP_016157089.1
type: Protein
SIO_000068: ncbiprotein

position:295500:1
position: 295500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354323:1
position: 354323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295500-295793:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295978-296319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:296485-297008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:330267-330430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335972-336088:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:341764-342042:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345658-345802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:349724-349854:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353142-353299:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:354171-354323:1:exon

ARHGAP26
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(364098..486415)
location: region:364098-486415:-1
so has part: feature:364098-486415:-1:exon
subclass of: SO_0000010

101818004
type: Gene
SIO_000068: ncbigene

position:364098:-1
position: 364098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486415:-1
position: 486415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364098-486415:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005053708.2
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(364098..365184,366705..366829,368345..368436,371759..371869,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:364098-486362:-1
so has part: feature:486209-486362:-1:exon
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so has part: feature:464837-464898:-1:exon
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so has part: feature:366705-366829:-1:exon
so has part: feature:364098-365184:-1:exon

position:486362:-1
position: 486362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

position:486209:-1
position: 486209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

position:465772:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465867:-1
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urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

position:464837:-1
position: 464837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464898:-1
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urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

position:464461:-1
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reference: sequence
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position:464532:-1
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urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

position:463268:-1
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reference: sequence
type: ReverseStrandPosition
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position:463369:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

position:460495:-1
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position:460605:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

position:460174:-1
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position:460278:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

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reference: sequence
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position:459501:-1
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urn:…
SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:459121:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

position:455664:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455758:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:447221:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:426873:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

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urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

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position:419146:-1
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urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

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position:414585:-1
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urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

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reference: sequence
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position:413452:-1
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urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

position:412643:-1
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reference: sequence
type: ReverseStrandPosition
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position:412748:-1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

position:396958:-1
position: 396958
reference: sequence
type: ReverseStrandPosition
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position:397117:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

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reference: sequence
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position:395668:-1
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reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

position:390543:-1
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reference: sequence
type: ReverseStrandPosition
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position:390696:-1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:371759-371869:-1:exon

position:371759:-1
position: 371759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371869:-1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:368345-368436:-1:exon

position:368345:-1
position: 368345
reference: sequence
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position:368436:-1
position: 368436
reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:366705-366829:-1:exon

position:366705:-1
position: 366705
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position:366829:-1
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urn:…
SIO_000300: 24
SIO_000628: feature:364098-365184:-1:exon

position:365184:-1
position: 365184
reference: sequence
type: ReverseStrandPosition
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ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_016301621.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(366616..366829,368345..368436,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:366616-486362:-1
so has part: feature:486209-486362:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
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so has part: feature:460174-460278:-1:exon
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so has part: feature:447143-447221:-1:exon
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so has part: feature:419072-419146:-1:exon
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so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
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so has part: feature:390543-390696:-1:exon
so has part: feature:368345-368436:-1:exon
so has part: feature:366616-366829:-1:exon

position:366616:-1
position: 366616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

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SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

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SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

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SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

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SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

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SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

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SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

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SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

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SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

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SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

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SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

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SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

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SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:368345-368436:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:366616-366829:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016301620.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(366616..366829,368345..368436,371759..371869,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:366616-486362:-1
so has part: feature:486209-486362:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
so has part: feature:460495-460605:-1:exon
so has part: feature:460174-460278:-1:exon
so has part: feature:459372-459501:-1:exon
so has part: feature:459021-459121:-1:exon
so has part: feature:455664-455758:-1:exon
so has part: feature:447143-447221:-1:exon
so has part: feature:426837-426873:-1:exon
so has part: feature:419835-419900:-1:exon
so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
so has part: feature:395536-395668:-1:exon
so has part: feature:390543-390696:-1:exon
so has part: feature:371759-371869:-1:exon
so has part: feature:368345-368436:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

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SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

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SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

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SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

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SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

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SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

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SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

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SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:371759-371869:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:368345-368436:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:366616-366829:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X3
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKEAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDTIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAAANAQLLLSRKKSSESKPPSCSERPLTLFHTGQPGEKENRNSIINSSLESVISSNVNSFLNSSSAPQPSLNSSDLELEVIKPNRPNSLSPLRRARALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLDGKTGLIPENYVEFL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(366741..366829,368345..368436,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:366741-486362:-1
so has part: feature:486209-486362:-1:exon
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so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
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so has part: feature:390543-390696:-1:exon
so has part: feature:368345-368436:-1:exon
so has part: feature:366741-366829:-1:exon

XP_016157107.1
type: Protein
SIO_000068: ncbiprotein

position:366741:-1
position: 366741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

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SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

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SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

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SIO_000300: 8
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SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:368345-368436:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:366741-366829:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X2
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKEAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDTIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAAANAQLLLSRKKSSESKPPSCSERPLTLFHTGQPGEKENRNSIINSSLESVISSNVNSFLNSSSAPQPSLNSSDLELEVIKPNRPNSLPQNASPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPISSPLRRARALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLDGKTGLIPENYVEFL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(366741..366829,368345..368436,371759..371869,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:366741-486362:-1
so has part: feature:486209-486362:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
so has part: feature:460495-460605:-1:exon
so has part: feature:460174-460278:-1:exon
so has part: feature:459372-459501:-1:exon
so has part: feature:459021-459121:-1:exon
so has part: feature:455664-455758:-1:exon
so has part: feature:447143-447221:-1:exon
so has part: feature:426837-426873:-1:exon
so has part: feature:419835-419900:-1:exon
so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
so has part: feature:395536-395668:-1:exon
so has part: feature:390543-390696:-1:exon
so has part: feature:371759-371869:-1:exon
so has part: feature:368345-368436:-1:exon
so has part: feature:366741-366829:-1:exon

XP_016157106.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:371759-371869:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:368345-368436:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:366741-366829:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X2
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKEAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDTIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAAANAQLLLSRKKSSESKPPSCSERPLTLFHTGQPGEKENRNSIINSSLESVISSNVNSFLNSSSAPQPSLNSSDLELEVIKPNRPNSLPQNASPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPISSPLRRARALYACKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTLDGKTGLIPENYVEFL
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(366741..366829,368345..368436,371759..371869,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:366741-486362:-1
so has part: feature:486209-486362:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
so has part: feature:460495-460605:-1:exon
so has part: feature:460174-460278:-1:exon
so has part: feature:459372-459501:-1:exon
so has part: feature:459021-459121:-1:exon
so has part: feature:455664-455758:-1:exon
so has part: feature:447143-447221:-1:exon
so has part: feature:426837-426873:-1:exon
so has part: feature:419835-419900:-1:exon
so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
so has part: feature:395536-395668:-1:exon
so has part: feature:390543-390696:-1:exon
so has part: feature:371759-371869:-1:exon
so has part: feature:368345-368436:-1:exon
so has part: feature:366741-366829:-1:exon

XP_005053765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:371759-371869:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:368345-368436:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:366741-366829:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053707.1
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(370783..371869,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486415))
location: region:370783-486415:-1
so has part: feature:486209-486415:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
so has part: feature:460495-460605:-1:exon
so has part: feature:460174-460278:-1:exon
so has part: feature:459372-459501:-1:exon
so has part: feature:459021-459121:-1:exon
so has part: feature:455664-455758:-1:exon
so has part: feature:447143-447221:-1:exon
so has part: feature:426837-426873:-1:exon
so has part: feature:419835-419900:-1:exon
so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
so has part: feature:395536-395668:-1:exon
so has part: feature:390543-390696:-1:exon
so has part: feature:370783-371869:-1:exon

position:370783:-1
position: 370783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:370783-371869:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005053710.2
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(370783..371189,371759..371869,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:370783-486362:-1
so has part: feature:486209-486362:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
so has part: feature:460495-460605:-1:exon
so has part: feature:460174-460278:-1:exon
so has part: feature:459372-459501:-1:exon
so has part: feature:459021-459121:-1:exon
so has part: feature:455664-455758:-1:exon
so has part: feature:447143-447221:-1:exon
so has part: feature:426837-426873:-1:exon
so has part: feature:419835-419900:-1:exon
so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
so has part: feature:395536-395668:-1:exon
so has part: feature:390543-390696:-1:exon
so has part: feature:371759-371869:-1:exon
so has part: feature:370783-371189:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:371759-371869:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:370783-371189:-1:exon

position:371189:-1
position: 371189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X4
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKEAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDTIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAAANAQLLLSRKKSSESKPPSCSERPLTLFHTGQPGEKENRNSIINSSLESVISSNVNSFLNSSSAPQPSLNSSDLELEVIKPNRPNSLPQNASPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPIRCPV
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(371177..371189,371759..371869,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:371177-486362:-1
so has part: feature:486209-486362:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
so has part: feature:460495-460605:-1:exon
so has part: feature:460174-460278:-1:exon
so has part: feature:459372-459501:-1:exon
so has part: feature:459021-459121:-1:exon
so has part: feature:455664-455758:-1:exon
so has part: feature:447143-447221:-1:exon
so has part: feature:426837-426873:-1:exon
so has part: feature:419835-419900:-1:exon
so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
so has part: feature:395536-395668:-1:exon
so has part: feature:390543-390696:-1:exon
so has part: feature:371759-371869:-1:exon
so has part: feature:371177-371189:-1:exon

XP_005053767.1
type: Protein
SIO_000068: ncbiprotein

position:371177:-1
position: 371177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:371759-371869:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:371177-371189:-1:exon

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X1
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKEAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDTIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAAANAQLLLSRKKSSESKPPSCSERPLTLFHTGQPGEKENRNSIINSSLESVISSNVNSFLNSSSAPQPSLNSSDLELEVIKPNRPNSLPQNASPTSPLSPSWPMFSAPSSPMPTSSTSSDSSPIRSVPQFPWLLVAFAVPVEFPWFPPLHFPFPWHAARALPGQLSALSQRGASRASCPRAAGAVTAGLAQLSSAQLSSAPLLPLLCSATGKKCTERSKEPVGALPSLPHWHASRVMDMGSTGCSVPSLKGLGHPWSCRWTSTGCPVTPRAGAG
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(371308..371869,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:371308-486362:-1
so has part: feature:486209-486362:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
so has part: feature:460495-460605:-1:exon
so has part: feature:460174-460278:-1:exon
so has part: feature:459372-459501:-1:exon
so has part: feature:459021-459121:-1:exon
so has part: feature:455664-455758:-1:exon
so has part: feature:447143-447221:-1:exon
so has part: feature:426837-426873:-1:exon
so has part: feature:419835-419900:-1:exon
so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
so has part: feature:395536-395668:-1:exon
so has part: feature:390543-390696:-1:exon
so has part: feature:371308-371869:-1:exon

XP_005053764.1
type: Protein
SIO_000068: ncbiprotein

position:371308:-1
position: 371308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:371308-371869:-1:exon

ARHGAP26
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARHGAP26
product: Rho GTPase activating protein 26, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005053711.2
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(371878..374488,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:371878-486362:-1
so has part: feature:486209-486362:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
so has part: feature:460495-460605:-1:exon
so has part: feature:460174-460278:-1:exon
so has part: feature:459372-459501:-1:exon
so has part: feature:459021-459121:-1:exon
so has part: feature:455664-455758:-1:exon
so has part: feature:447143-447221:-1:exon
so has part: feature:426837-426873:-1:exon
so has part: feature:419835-419900:-1:exon
so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
so has part: feature:395536-395668:-1:exon
so has part: feature:390543-390696:-1:exon
so has part: feature:371878-374488:-1:exon

position:371878:-1
position: 371878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:371878-374488:-1:exon

position:374488:-1
position: 374488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP26
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARHGAP26
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 26 isoform X5
translation: MGLPALEFSECCLDSPQFRERLRSHEAELDKTNKFIKELIKDGKSLVAALKNLSAAKRKFADSLNEFKFRCIGDAETDDEICIAKSLQEFATVLRNLEDERMRMIENASEVLITPLEKFRKEQIGAAKEAKKKYDKETEKYCGVLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVFKVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFSDFKTELTISIQNTRNRFEGTRSEVEALMKKMKENPHEHKNISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRESKRITMVPFDQKSGGKGGEDEAVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLWMEAMDGREPVYNSNKDSQSEGTAQLDTIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETDTEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTVPEAAANAQLLLSRKKSSESKPPSCSERPLTLFHTGQPGEKENRNSIINSSLESVISSNVNSFLNSSSAPQPSLNSSDLELEVIKPNRPNSLKSPSQSPPE
SIO_010081: ARHGAP26
subclass of: SO_0000673
so part of: ARHGAP26
location: complement(join(374458..374488,390543..390696,395536..395668,396958..397117,412643..412748,413394..413452,414498..414585,419072..419146,419835..419900,426837..426873,447143..447221,455664..455758,459021..459121,459372..459501,460174..460278,460495..460605,463268..463369,464461..464532,464837..464898,465772..465867,486209..486362))
location: region:374458-486362:-1
so has part: feature:486209-486362:-1:exon
so has part: feature:465772-465867:-1:exon
so has part: feature:464837-464898:-1:exon
so has part: feature:464461-464532:-1:exon
so has part: feature:463268-463369:-1:exon
so has part: feature:460495-460605:-1:exon
so has part: feature:460174-460278:-1:exon
so has part: feature:459372-459501:-1:exon
so has part: feature:459021-459121:-1:exon
so has part: feature:455664-455758:-1:exon
so has part: feature:447143-447221:-1:exon
so has part: feature:426837-426873:-1:exon
so has part: feature:419835-419900:-1:exon
so has part: feature:419072-419146:-1:exon
so has part: feature:414498-414585:-1:exon
so has part: feature:413394-413452:-1:exon
so has part: feature:412643-412748:-1:exon
so has part: feature:396958-397117:-1:exon
so has part: feature:395536-395668:-1:exon
so has part: feature:390543-390696:-1:exon
so has part: feature:374458-374488:-1:exon

XP_005053768.1
type: Protein
SIO_000068: ncbiprotein

position:374458:-1
position: 374458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486209-486362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465772-465867:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464837-464898:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464461-464532:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:463268-463369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:460495-460605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460174-460278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459372-459501:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459021-459121:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455664-455758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:447143-447221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:426837-426873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:419835-419900:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:419072-419146:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:414498-414585:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:413394-413452:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:412643-412748:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:396958-397117:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:395536-395668:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:390543-390696:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:374458-374488:-1:exon

FGF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 502677..526534
location: region:502677-526534:1
so has part: feature:502677-526534:1:exon
subclass of: SO_0000010

101817673
type: Gene
SIO_000068: ncbigene

position:502677:1
position: 502677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526534:1
position: 526534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502677-526534:1:exon

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FGF1
product: fibroblast growth factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005053705.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(502677..502925,518567..518759,523215..523318,523976..526534)
location: region:502677-526534:1
so has part: feature:502677-502925:1:exon
so has part: feature:518567-518759:1:exon
so has part: feature:523215-523318:1:exon
so has part: feature:523976-526534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502677-502925:1:exon

position:502925:1
position: 502925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518567-518759:1:exon

position:518567:1
position: 518567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518759:1
position: 518759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:523215-523318:1:exon

position:523215:1
position: 523215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523318:1
position: 523318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:523976-526534:1:exon

position:523976:1
position: 523976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FGF1
product: fibroblast growth factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005053706.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(502677..502925,518567..518759,523215..523318,523979..526534)
location: region:502677-526534:1
so has part: feature:502677-502925:1:exon
so has part: feature:518567-518759:1:exon
so has part: feature:523215-523318:1:exon
so has part: feature:523979-526534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502677-502925:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518567-518759:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:523215-523318:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:523979-526534:1:exon

position:523979:1
position: 523979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FGF1
product: fibroblast growth factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016301706.1
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(518485..518759,523215..523318,523976..526534)
location: region:518485-526534:1
so has part: feature:518485-518759:1:exon
so has part: feature:523215-523318:1:exon
so has part: feature:523976-526534:1:exon

position:518485:1
position: 518485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518485-518759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523215-523318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:523976-526534:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFDLPAGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESVGVVHIKSTQSGQYLAMDTNGLLYGSQLLGEECLFLERLEENHYNTYVSKLHADKSWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSPD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(518591..518759,523215..523318,523976..524170)
location: region:518591-524170:1
so has part: feature:518591-518759:1:exon
so has part: feature:523215-523318:1:exon
so has part: feature:523976-524170:1:exon

XP_016157192.1
type: Protein
SIO_000068: ncbiprotein

position:518591:1
position: 518591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524170:1
position: 524170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518591-518759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523215-523318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:523976-524170:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X1
translation: MAEGEITTFTALTEKFDLPAGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESVGVVHIKSTQSGQYLAMDTNGLLYGSQLLGEECLFLERLEENHYNTYVSKLHADKSWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSPD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(518591..518759,523215..523318,523976..524170)
location: region:518591-524170:1
so has part: feature:518591-518759:1:exon
so has part: feature:523215-523318:1:exon
so has part: feature:523976-524170:1:exon

XP_005053762.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518591-518759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523215-523318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:523976-524170:1:exon

FGF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FGF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 1 isoform X2
translation: MAEGEITTFTALTEKFDLPAGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESVGVVHIKSTQSGQYLAMDTNGLLYGSLLGEECLFLERLEENHYNTYVSKLHADKSWFVGLKKNGNSKLGPRTHYGQKAILFLPLPVSPD
SIO_010081: FGF1
subclass of: SO_0000673
so part of: FGF1
location: join(518591..518759,523215..523318,523979..524170)
location: region:518591-524170:1
so has part: feature:518591-518759:1:exon
so has part: feature:523215-523318:1:exon
so has part: feature:523979-524170:1:exon

XP_005053763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518591-518759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523215-523318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:523979-524170:1:exon

SPRY4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SPRY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 567486..582355
location: region:567486-582355:1
so has part: feature:567486-582355:1:exon
subclass of: SO_0000010

101817479
type: Gene
SIO_000068: ncbigene

position:567486:1
position: 567486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582355:1
position: 582355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567486-582355:1:exon

SPRY4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SPRY4
product: sprouty RTK signaling antagonist 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005053704.1
SIO_010081: SPRY4
subclass of: SO_0000673
so part of: SPRY4
location: join(567486..567682,578438..582355)
location: region:567486-582355:1
so has part: feature:567486-567682:1:exon
so has part: feature:578438-582355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:567486-567682:1:exon

position:567682:1
position: 567682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:578438-582355:1:exon

position:578438:1
position: 578438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPRY4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SPRY4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein sprouty homolog 4
translation: MEPRIAHNITVVPNSAMVQPLLDSRIPYGRLQHPLTILPIDQMKTTHVENDYTDNPSASQPAQKRPRAPHEPGLGSQHPQRCEQDVTHPWISFSGRPSSISSSSSTSSDQRLLEHMAPVPVAEQSSPRAVRIQPKVINCKPLELKGPTPQELDKHFLLCEACGKCKCKECALPRTLPSCWVCNQECLCSAQNLVNYSTCMCLVKGVFYHCTNEDDEGTCADQPCSCSQSNCCARWSFMSALSLVLPCLLCYLPATGCVKLAQRCYDRVSRPGCRCKNTNSVICKALPESKGAEKPF
SIO_010081: SPRY4
subclass of: SO_0000673
so part of: SPRY4
location: 578484..579374
location: region:578484-579374:1
so has part: feature:578484-579374:1:exon

XP_005053761.1
type: Protein
SIO_000068: ncbiprotein

position:578484:1
position: 578484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579374:1
position: 579374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578484-579374:1:exon

NDFIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NDFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(604435..626292)
location: region:604435-626292:-1
so has part: feature:604435-626292:-1:exon
subclass of: SO_0000010

101812452
type: Gene
SIO_000068: ncbigene

position:604435:-1
position: 604435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626292:-1
position: 626292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604435-626292:-1:exon

NDFIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NDFIP1
product: Nedd4 family interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016301670.1
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(604435..604880,606927..607032,607593..607659,609274..609398,609571..609658,611211..611341,612060..612147,626231..626292))
location: region:604435-626292:-1
so has part: feature:626231-626292:-1:exon
so has part: feature:612060-612147:-1:exon
so has part: feature:611211-611341:-1:exon
so has part: feature:609571-609658:-1:exon
so has part: feature:609274-609398:-1:exon
so has part: feature:607593-607659:-1:exon
so has part: feature:606927-607032:-1:exon
so has part: feature:604435-604880:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626231-626292:-1:exon

position:626231:-1
position: 626231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612060-612147:-1:exon

position:612060:-1
position: 612060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612147:-1
position: 612147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611211-611341:-1:exon

position:611211:-1
position: 611211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611341:-1
position: 611341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:609571-609658:-1:exon

position:609571:-1
position: 609571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609658:-1
position: 609658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:609274-609398:-1:exon

position:609274:-1
position: 609274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609398:-1
position: 609398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:607593-607659:-1:exon

position:607593:-1
position: 607593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607659:-1
position: 607659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:606927-607032:-1:exon

position:606927:-1
position: 606927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607032:-1
position: 607032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:604435-604880:-1:exon

position:604880:-1
position: 604880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDFIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NDFIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4 family-interacting protein 1
translation: MDGRRHHGLPSALQNEEEPGEAVPVVSDAPPPYSSISAESTAYFDYKDESGFPKPPSYNVATTLPSYDEAERTKAEATIPLVPGRDEDFVTRDDFDDTDQLRIGNDGIFMLTFFMAFLFNWIGFFLSFCLTTSAAGRYGAISGFGLSLIKWILIVRFSTYFPGYFDGQYWLWWVFLVLGFLLFLRGFINYAKVRKMPDTFSTLPRTRVLFIY
SIO_010081: NDFIP1
subclass of: SO_0000673
so part of: NDFIP1
location: complement(join(606929..607032,607593..607659,609274..609398,609571..609658,611211..611341,612060..612147,626231..626266))
location: region:606929-626266:-1
so has part: feature:626231-626266:-1:exon
so has part: feature:612060-612147:-1:exon
so has part: feature:611211-611341:-1:exon
so has part: feature:609571-609658:-1:exon
so has part: feature:609274-609398:-1:exon
so has part: feature:607593-607659:-1:exon
so has part: feature:606929-607032:-1:exon

XP_016157156.1
type: Protein
SIO_000068: ncbiprotein

position:606929:-1
position: 606929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626266:-1
position: 626266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626231-626266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612060-612147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:611211-611341:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:609571-609658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:609274-609398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607593-607659:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606929-607032:-1:exon

GNPDA1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GNPDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 628917..633447
location: region:628917-633447:1
so has part: feature:628917-633447:1:exon
subclass of: SO_0000010

101816315
type: Gene
SIO_000068: ncbigene

position:628917:1
position: 628917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633447:1
position: 633447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628917-633447:1:exon

GNPDA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GNPDA1
product: glucosamine-6-phosphate deaminase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053697.2
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(628917..629151,629225..629326,630427..630609,631147..631331,631887..632061,632323..633447)
location: region:628917-633447:1
so has part: feature:628917-629151:1:exon
so has part: feature:629225-629326:1:exon
so has part: feature:630427-630609:1:exon
so has part: feature:631147-631331:1:exon
so has part: feature:631887-632061:1:exon
so has part: feature:632323-633447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:628917-629151:1:exon

position:629151:1
position: 629151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:629225-629326:1:exon

position:629225:1
position: 629225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629326:1
position: 629326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:630427-630609:1:exon

position:630427:1
position: 630427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630609:1
position: 630609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:631147-631331:1:exon

position:631147:1
position: 631147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631331:1
position: 631331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:631887-632061:1:exon

position:631887:1
position: 631887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632061:1
position: 632061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:632323-633447:1:exon

position:632323:1
position: 632323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNPDA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GNPDA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucosamine-6-phosphate isomerase 1
translation: MKLIILENYSQASEWAAKYIRNRIVQFGPGPGRFFTLGLPTGSTPLGCYGKLVEYYRNGDLSFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDISPENVHILDGNAPDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLSKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEDGVNHMWTVSAFQQHPNTVFVCDEDATLELKVKTVKYFKGLMLVHNKLVEPLYSMKEMGTERSQSKKPYSD
SIO_010081: GNPDA1
subclass of: SO_0000673
so part of: GNPDA1
location: join(629028..629151,629225..629326,630427..630609,631147..631331,631887..632061,632323..632420)
location: region:629028-632420:1
so has part: feature:629028-629151:1:exon
so has part: feature:629225-629326:1:exon
so has part: feature:630427-630609:1:exon
so has part: feature:631147-631331:1:exon
so has part: feature:631887-632061:1:exon
so has part: feature:632323-632420:1:exon

XP_005053754.1
type: Protein
SIO_000068: ncbiprotein

position:629028:1
position: 629028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632420:1
position: 632420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629028-629151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:629225-629326:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630427-630609:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631147-631331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:631887-632061:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:632323-632420:1:exon

RNF14
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(633546..640221)
location: region:633546-640221:-1
so has part: feature:633546-640221:-1:exon
subclass of: SO_0000010

101817033
type: Gene
SIO_000068: ncbigene

position:633546:-1
position: 633546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640221:-1
position: 640221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633546-640221:-1:exon

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RNF14
product: ring finger protein 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005053703.2
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(633546..634234,634949..635031,635622..635752,636333..636505,637085..637313,637974..638501,638791..638942,639447..639627,640081..640221))
location: region:633546-640221:-1
so has part: feature:640081-640221:-1:exon
so has part: feature:639447-639627:-1:exon
so has part: feature:638791-638942:-1:exon
so has part: feature:637974-638501:-1:exon
so has part: feature:637085-637313:-1:exon
so has part: feature:636333-636505:-1:exon
so has part: feature:635622-635752:-1:exon
so has part: feature:634949-635031:-1:exon
so has part: feature:633546-634234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:640081-640221:-1:exon

position:640081:-1
position: 640081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:639447-639627:-1:exon

position:639447:-1
position: 639447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639627:-1
position: 639627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:638791-638942:-1:exon

position:638791:-1
position: 638791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638942:-1
position: 638942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:637974-638501:-1:exon

position:637974:-1
position: 637974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638501:-1
position: 638501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:637085-637313:-1:exon

position:637085:-1
position: 637085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637313:-1
position: 637313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:636333-636505:-1:exon

position:636333:-1
position: 636333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636505:-1
position: 636505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635622-635752:-1:exon

position:635622:-1
position: 635622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635752:-1
position: 635752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:634949-635031:-1:exon

position:634949:-1
position: 634949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635031:-1
position: 635031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:633546-634234:-1:exon

position:634234:-1
position: 634234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RNF14
product: ring finger protein 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_016301631.1
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(634258..635031,635622..635752,636333..636505,637085..637313,637974..638501,638791..638938,639447..639522))
location: region:634258-639522:-1
so has part: feature:639447-639522:-1:exon
so has part: feature:638791-638938:-1:exon
so has part: feature:637974-638501:-1:exon
so has part: feature:637085-637313:-1:exon
so has part: feature:636333-636505:-1:exon
so has part: feature:635622-635752:-1:exon
so has part: feature:634258-635031:-1:exon

position:634258:-1
position: 634258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639522:-1
position: 639522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639447-639522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638791-638938:-1:exon

position:638938:-1
position: 638938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:637974-638501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637085-637313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636333-636505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635622-635752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:634258-635031:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X1
translation: MSSEDKEAQEDELLALASIYDEDEFKRADSVQGGETRICLELPQDFKIFVRGSSTESLQSSGFEYSVCFLPPLVLNFELPPDYPSTSPPVFTLSGKWLSQAQLSALCKHLDNVWEENRGCVVLFAWMQFLKEETLSYLNISSPYELKMCPQGKGQSWTPGEPLEAGKDCGGATGSATAEEEIMDARAVQDVESLSSLIREILDFDQAQRRRCFNSKMYLCSICFCEKLGSECMHFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEELFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSCCNYAFCTLCRMTYHGVSPCKVTAEKLMDLRNEYLEADETTKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTHIEKLDGCNKMTCTGCMQYFCWLCMGSLSRANPYRHFNDPSSPCFNRLFQAMHMDDGEFWEVEDDD
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(634971..635031,635622..635752,636333..636505,637085..637313,637974..638501,638791..638942,639447..639600))
location: region:634971-639600:-1
so has part: feature:639447-639600:-1:exon
so has part: feature:638791-638942:-1:exon
so has part: feature:637974-638501:-1:exon
so has part: feature:637085-637313:-1:exon
so has part: feature:636333-636505:-1:exon
so has part: feature:635622-635752:-1:exon
so has part: feature:634971-635031:-1:exon

XP_005053760.1
type: Protein
SIO_000068: ncbiprotein

position:634971:-1
position: 634971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639600:-1
position: 639600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639447-639600:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638791-638942:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:637974-638501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:637085-637313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:636333-636505:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:635622-635752:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:634971-635031:-1:exon

RNF14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RNF14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF14 isoform X2
translation: MQFLKEETLSYLNISSPYELKMCPQGKGQSWTPGEPLEAGKDCGGATGSATAEEEIMDARAVQDVESLSSLIREILDFDQAQRRRCFNSKMYLCSICFCEKLGSECMHFTECSHVYCKACLKDYFEIQIRDGQVHCLNCPEPKCSSVATPGQVKELVGEELFARYDRLLLQSSLDLMADVVYCPRPGCQTPVMQEPGCTMGICSCCNYAFCTLCRMTYHGVSPCKVTAEKLMDLRNEYLEADETTKRFLEQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTHIEKLDGCNKMTCTGCMQYFCWLCMGSLSRANPYRHFNDPSSPCFNRLFQAMHMDDGEFWEVEDDD
SIO_010081: RNF14
subclass of: SO_0000673
so part of: RNF14
location: complement(join(634971..635031,635622..635752,636333..636505,637085..637313,637974..638429))
location: region:634971-638429:-1
so has part: feature:637974-638429:-1:exon
so has part: feature:637085-637313:-1:exon
so has part: feature:636333-636505:-1:exon
so has part: feature:635622-635752:-1:exon
so has part: feature:634971-635031:-1:exon

XP_016157117.1
type: Protein
SIO_000068: ncbiprotein

position:638429:-1
position: 638429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637974-638429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637085-637313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636333-636505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:635622-635752:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634971-635031:-1:exon

HSPA4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HSPA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(642742..658849)
location: region:642742-658849:-1
so has part: feature:642742-658849:-1:exon
subclass of: SO_0000010

101816131
type: Gene
SIO_000068: ncbigene

position:642742:-1
position: 642742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658849:-1
position: 658849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642742-658849:-1:exon

HSPA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HSPA4
product: heat shock protein family A (Hsp70) member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005053695.2
SIO_010081: HSPA4
subclass of: SO_0000673
so part of: HSPA4
location: complement(join(642742..643917,644105..644266,644642..644761,645065..645172,645885..646010,646473..646625,647121..647207,647587..647768,648147..648280,648588..648694,648814..648965,649241..649317,649758..650002,651300..651433,651823..651922,652360..652482,652685..652825,654402..654459,658685..658849))
location: region:642742-658849:-1
so has part: feature:658685-658849:-1:exon
so has part: feature:654402-654459:-1:exon
so has part: feature:652685-652825:-1:exon
so has part: feature:652360-652482:-1:exon
so has part: feature:651823-651922:-1:exon
so has part: feature:651300-651433:-1:exon
so has part: feature:649758-650002:-1:exon
so has part: feature:649241-649317:-1:exon
so has part: feature:648814-648965:-1:exon
so has part: feature:648588-648694:-1:exon
so has part: feature:648147-648280:-1:exon
so has part: feature:647587-647768:-1:exon
so has part: feature:647121-647207:-1:exon
so has part: feature:646473-646625:-1:exon
so has part: feature:645885-646010:-1:exon
so has part: feature:645065-645172:-1:exon
so has part: feature:644642-644761:-1:exon
so has part: feature:644105-644266:-1:exon
so has part: feature:642742-643917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658685-658849:-1:exon

position:658685:-1
position: 658685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:654402-654459:-1:exon

position:654402:-1
position: 654402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654459:-1
position: 654459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:652685-652825:-1:exon

position:652685:-1
position: 652685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652825:-1
position: 652825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:652360-652482:-1:exon

position:652360:-1
position: 652360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652482:-1
position: 652482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:651823-651922:-1:exon

position:651823:-1
position: 651823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651922:-1
position: 651922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:651300-651433:-1:exon

position:651300:-1
position: 651300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651433:-1
position: 651433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:649758-650002:-1:exon

position:649758:-1
position: 649758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650002:-1
position: 650002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:649241-649317:-1:exon

position:649241:-1
position: 649241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649317:-1
position: 649317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:648814-648965:-1:exon

position:648814:-1
position: 648814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648965:-1
position: 648965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:648588-648694:-1:exon

position:648588:-1
position: 648588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648694:-1
position: 648694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:648147-648280:-1:exon

position:648147:-1
position: 648147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648280:-1
position: 648280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:647587-647768:-1:exon

position:647587:-1
position: 647587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647768:-1
position: 647768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:647121-647207:-1:exon

position:647121:-1
position: 647121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647207:-1
position: 647207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:646473-646625:-1:exon

position:646473:-1
position: 646473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646625:-1
position: 646625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:645885-646010:-1:exon

position:645885:-1
position: 645885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646010:-1
position: 646010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:645065-645172:-1:exon

position:645065:-1
position: 645065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645172:-1
position: 645172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:644642-644761:-1:exon

position:644642:-1
position: 644642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644761:-1
position: 644761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:644105-644266:-1:exon

position:644105:-1
position: 644105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644266:-1
position: 644266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:642742-643917:-1:exon

position:643917:-1
position: 643917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HSPA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HSPA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock 70 kDa protein 4
translation: MSVVGIDLGFQSCYVAVARAGGIETVANEYSDRSTPACISFGPKNRSIGAAAKSQVISNAKNTVQSFKRFHGRAFSDPFVQAEKASLAYELVQLPTGSTGIKAMYMEEERNFTIEQVTGMLLTKLKETAENALKKPVVDCVVSVPSFYTDAERRSVMDATQIAGLNCLKLINETTAVALAYGIYKQDLPAFEEKPRNVVFVDMGHSAYQVSVCAFNKGKLKVLATAFDTTLGGRKFDEVLVEYFCEEFGKKYKLDIKSKIRALLRLYQECERLKKLMSANASDLPMNIECFMNDIDVSGTMNRSKFLEMCEGLLARVEPPLRSVLDQARLRKEDIYAVEIVGGTTRIPAVKEKISKFFGKEVSTTLNADEAVARGCALQCAILSPAFKVREFSITDLIPYPISLRWNSPAEEGLSDCEVFPKNHPAPFSKVLTFYRKEPFTLEAYYSSPKDLPYPDPAIAHFLVQKVTPQTDGSSSKVKVKVRVNIHGIFSVSSASLVEVHKSDENEEPMETDQHAKEEEKMQIDEEQQKAEEQQQTQPENKAESEEMETCQADSKDKKVDQPPQAKKAKVKTTTVDLPIENQLVWQIGKDMLNLFIENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKLCGVYEKFVSEDDRNSFTLKLEDTEIWLYEDGEDQPKQIYIDKLAELKALGQPIQARFQESEERPKAFEDLGKQIQQYMKAVHGFKAKDELYEHLDEADVAKVEKSTNEAMEWMNNNLNLQNKRSLTLDPVIKAKDIQAKAKELAGICNPIVNKPKPKVELPKEEQKPTEANGPLDGQGDGSGTQPPEQGSAPTATDKKLPEMDID
SIO_010081: HSPA4
subclass of: SO_0000673
so part of: HSPA4
location: complement(join(643723..643917,644105..644266,644642..644761,645065..645172,645885..646010,646473..646625,647121..647207,647587..647768,648147..648280,648588..648694,648814..648965,649241..649317,649758..650002,651300..651433,651823..651922,652360..652482,652685..652825,654402..654459,658685..658791))
location: region:643723-658791:-1
so has part: feature:658685-658791:-1:exon
so has part: feature:654402-654459:-1:exon
so has part: feature:652685-652825:-1:exon
so has part: feature:652360-652482:-1:exon
so has part: feature:651823-651922:-1:exon
so has part: feature:651300-651433:-1:exon
so has part: feature:649758-650002:-1:exon
so has part: feature:649241-649317:-1:exon
so has part: feature:648814-648965:-1:exon
so has part: feature:648588-648694:-1:exon
so has part: feature:648147-648280:-1:exon
so has part: feature:647587-647768:-1:exon
so has part: feature:647121-647207:-1:exon
so has part: feature:646473-646625:-1:exon
so has part: feature:645885-646010:-1:exon
so has part: feature:645065-645172:-1:exon
so has part: feature:644642-644761:-1:exon
so has part: feature:644105-644266:-1:exon
so has part: feature:643723-643917:-1:exon

XP_005053752.1
type: Protein
SIO_000068: ncbiprotein

position:643723:-1
position: 643723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658791:-1
position: 658791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658685-658791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654402-654459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:652685-652825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:652360-652482:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:651823-651922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651300-651433:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649758-650002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:649241-649317:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648814-648965:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648588-648694:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:648147-648280:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:647587-647768:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:647121-647207:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:646473-646625:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:645885-646010:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:645065-645172:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:644642-644761:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:644105-644266:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:643723-643917:-1:exon

ZCCHC10
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 662232..672276
location: region:662232-672276:1
so has part: feature:662232-672276:1:exon
subclass of: SO_0000010

101815804
type: Gene
SIO_000068: ncbigene

position:662232:1
position: 662232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672276:1
position: 672276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662232-672276:1:exon

ZCCHC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZCCHC10
product: zinc finger CCHC-type containing 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016301743.1
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(662232..662295,664512..664673,667350..667391,670318..671539,671598..672276)
location: region:662232-672276:1
so has part: feature:662232-662295:1:exon
so has part: feature:664512-664673:1:exon
so has part: feature:667350-667391:1:exon
so has part: feature:670318-671539:1:exon
so has part: feature:671598-672276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:662232-662295:1:exon

position:662295:1
position: 662295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:664512-664673:1:exon

position:664512:1
position: 664512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664673:1
position: 664673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:667350-667391:1:exon

position:667350:1
position: 667350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667391:1
position: 667391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:670318-671539:1:exon

position:670318:1
position: 670318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671539:1
position: 671539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:671598-672276:1:exon

position:671598:1
position: 671598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZCCHC10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZCCHC10
product: zinc finger CCHC-type containing 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016301744.1
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(662232..662295,664512..664673,667350..667391,670318..671539,671598..672127,672207..672242)
location: region:662232-672242:1
so has part: feature:662232-662295:1:exon
so has part: feature:664512-664673:1:exon
so has part: feature:667350-667391:1:exon
so has part: feature:670318-671539:1:exon
so has part: feature:671598-672127:1:exon
so has part: feature:672207-672242:1:exon

position:672242:1
position: 672242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662232-662295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664512-664673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667350-667391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670318-671539:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671598-672127:1:exon

position:672127:1
position: 672127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:672207-672242:1:exon

position:672207:1
position: 672207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZCCHC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 10
translation: MATPMHRLIARRQAEANKQHVRCQKCLEFGHWTYECKGKRKYLHRPSRTAQLAKILKEKEKQLLLQQSTGESAAEKKTKKKRSKSVTSSSSSSSDSSASDSSSDSEDSSTSSSSSDSDSEDSNSSSSSSSHSSSSSSSSSDFESDSSSSSSSSSSSSTDSSSEDEPPKKKKKK
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(662255..662295,664512..664673,667350..667391,670318..670594)
location: region:662255-670594:1
so has part: feature:662255-662295:1:exon
so has part: feature:664512-664673:1:exon
so has part: feature:667350-667391:1:exon
so has part: feature:670318-670594:1:exon

XP_016157229.1
type: Protein
SIO_000068: ncbiprotein

position:662255:1
position: 662255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670594:1
position: 670594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:662255-662295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664512-664673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667350-667391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670318-670594:1:exon

ZCCHC10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZCCHC10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCHC domain-containing protein 10
translation: MATPMHRLIARRQAEANKQHVRCQKCLEFGHWTYECKGKRKYLHRPSRTAQLAKILKEKEKQLLLQQSTGESAAEKKTKKKRSKSVTSSSSSSSDSSASDSSSDSEDSSTSSSSSDSDSEDSNSSSSSSSHSSSSSSSSSDFESDSSSSSSSSSSSSTDSSSEDEPPKKKKKK
SIO_010081: ZCCHC10
subclass of: SO_0000673
so part of: ZCCHC10
location: join(662255..662295,664512..664673,667350..667391,670318..670594)
location: region:662255-670594:1
so has part: feature:662255-662295:1:exon
so has part: feature:664512-664673:1:exon
so has part: feature:667350-667391:1:exon
so has part: feature:670318-670594:1:exon

XP_016157230.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:662255-662295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:664512-664673:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667350-667391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:670318-670594:1:exon

AFF4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: AFF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 691482..720721
location: region:691482-720721:1
so has part: feature:691482-720721:1:exon
subclass of: SO_0000010

101812257
type: Gene
SIO_000068: ncbigene

position:691482:1
position: 691482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720721:1
position: 720721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691482-720721:1:exon

AFF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AFF4
product: AF4/FMR2 family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301517.1
SIO_010081: AFF4
subclass of: SO_0000673
so part of: AFF4
location: join(691482..691607,693011..693159,693276..693404,693949..694315,695614..695658,696498..696584,701545..701581,703053..703101,704226..704246,704776..704830,705939..705976,706349..706511,706938..707855,709862..709950,712212..712449,713437..713534,714038..714101,714245..714381,714778..714849,715507..715600,716305..716348,717147..717367,717944..720721)
location: region:691482-720721:1
so has part: feature:691482-691607:1:exon
so has part: feature:693011-693159:1:exon
so has part: feature:693276-693404:1:exon
so has part: feature:693949-694315:1:exon
so has part: feature:695614-695658:1:exon
so has part: feature:696498-696584:1:exon
so has part: feature:701545-701581:1:exon
so has part: feature:703053-703101:1:exon
so has part: feature:704226-704246:1:exon
so has part: feature:704776-704830:1:exon
so has part: feature:705939-705976:1:exon
so has part: feature:706349-706511:1:exon
so has part: feature:706938-707855:1:exon
so has part: feature:709862-709950:1:exon
so has part: feature:712212-712449:1:exon
so has part: feature:713437-713534:1:exon
so has part: feature:714038-714101:1:exon
so has part: feature:714245-714381:1:exon
so has part: feature:714778-714849:1:exon
so has part: feature:715507-715600:1:exon
so has part: feature:716305-716348:1:exon
so has part: feature:717147-717367:1:exon
so has part: feature:717944-720721:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:691482-691607:1:exon

position:691607:1
position: 691607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:693011-693159:1:exon

position:693011:1
position: 693011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693159:1
position: 693159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:693276-693404:1:exon

position:693276:1
position: 693276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693404:1
position: 693404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:693949-694315:1:exon

position:693949:1
position: 693949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694315:1
position: 694315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:695614-695658:1:exon

position:695614:1
position: 695614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695658:1
position: 695658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:696498-696584:1:exon

position:696498:1
position: 696498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696584:1
position: 696584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:701545-701581:1:exon

position:701545:1
position: 701545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:701581:1
position: 701581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:703053-703101:1:exon

position:703053:1
position: 703053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703101:1
position: 703101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:704226-704246:1:exon

position:704226:1
position: 704226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704246:1
position: 704246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:704776-704830:1:exon

position:704776:1
position: 704776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704830:1
position: 704830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:705939-705976:1:exon

position:705939:1
position: 705939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705976:1
position: 705976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:706349-706511:1:exon

position:706349:1
position: 706349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706511:1
position: 706511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:706938-707855:1:exon

position:706938:1
position: 706938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707855:1
position: 707855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:709862-709950:1:exon

position:709862:1
position: 709862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709950:1
position: 709950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:712212-712449:1:exon

position:712212:1
position: 712212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712449:1
position: 712449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:713437-713534:1:exon

position:713437:1
position: 713437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713534:1
position: 713534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:714038-714101:1:exon

position:714038:1
position: 714038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714101:1
position: 714101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:714245-714381:1:exon

position:714245:1
position: 714245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714381:1
position: 714381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:714778-714849:1:exon

position:714778:1
position: 714778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714849:1
position: 714849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:715507-715600:1:exon

position:715507:1
position: 715507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715600:1
position: 715600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:716305-716348:1:exon

position:716305:1
position: 716305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716348:1
position: 716348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:717147-717367:1:exon

position:717147:1
position: 717147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717367:1
position: 717367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:717944-720721:1:exon

position:717944:1
position: 717944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AFF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AFF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AF4/FMR2 family member 4
translation: MNREDRNVLRMKERERRNQEIQQGDEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYDEMTDLIGDRPLQKIVAIPKPSVPVAAAPDDNPPPGFFGEQRHGAGSHQSSKWTPVGPAPSTSAQSQKRSAGLGGPVSSLGSGHSRAHGSEHHGKEHQRSKSPRDPEPSWDSPSRVPSFASGQHSNQSFPPSLMSKSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQSHSGGVNELKPSSKAHLTKLKIPSQPLDASASGEVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGEQKRYNPSSKTSNGHQSKSCESNQTDMLKDDLKLSSSEDSDGEQDCDKTVPRSTPGSNSEPSQHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNKVNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYTDQGGSKDSISSTPGRDSKPTQKGSESSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMATNIPSNRHKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENESLPPSSQTPKYSESNRTPVKSSMEEDDSFFRQRMFSPMEEKELLSPLSDPDERYPLIVKIDLSLLSRIPGKPYKEADAAKAEKKSAPEKHGRESQKQPSDKSSTKGKRKHKQNEDENRASESKKTKLEEKAPSGHKNSSSRESSKPSAVKEKDLLPSPAAPALQKDSKQEHGSRKRTVSQSSSLKSNSNPGKESSSGSKSSSSSKQKKTEGKGSSSAKEAKEKILNNSSSCPPASAQATESAKSRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNAQESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQALLYLRLFKLKKESALKYSKTLTEHLKNCYNNSQAPSPGMGSKPVGMPSPVSPKLSPGNSGNYSSGAANPSGSGSSVTIPQRIHQMAASYVQVTSNFLYATEIWEQAEQLSREQKEFFAELDKVMGPLVFNTSIMTELVRYTRQGLHWLRLDAK
SIO_010081: AFF4
subclass of: SO_0000673
so part of: AFF4
location: join(691485..691607,693011..693159,693276..693404,693949..694315,695614..695658,696498..696584,701545..701581,703053..703101,704226..704246,704776..704830,705939..705976,706349..706511,706938..707855,709862..709950,712212..712449,713437..713534,714038..714101,714245..714381,714778..714849,715507..715600,716305..716348,717147..717367,717944..718062)
location: region:691485-718062:1
so has part: feature:691485-691607:1:exon
so has part: feature:693011-693159:1:exon
so has part: feature:693276-693404:1:exon
so has part: feature:693949-694315:1:exon
so has part: feature:695614-695658:1:exon
so has part: feature:696498-696584:1:exon
so has part: feature:701545-701581:1:exon
so has part: feature:703053-703101:1:exon
so has part: feature:704226-704246:1:exon
so has part: feature:704776-704830:1:exon
so has part: feature:705939-705976:1:exon
so has part: feature:706349-706511:1:exon
so has part: feature:706938-707855:1:exon
so has part: feature:709862-709950:1:exon
so has part: feature:712212-712449:1:exon
so has part: feature:713437-713534:1:exon
so has part: feature:714038-714101:1:exon
so has part: feature:714245-714381:1:exon
so has part: feature:714778-714849:1:exon
so has part: feature:715507-715600:1:exon
so has part: feature:716305-716348:1:exon
so has part: feature:717147-717367:1:exon
so has part: feature:717944-718062:1:exon

XP_016157003.1
type: Protein
SIO_000068: ncbiprotein

position:691485:1
position: 691485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718062:1
position: 718062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691485-691607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693011-693159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:693276-693404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:693949-694315:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:695614-695658:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:696498-696584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:701545-701581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703053-703101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:704226-704246:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:704776-704830:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:705939-705976:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:706349-706511:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:706938-707855:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:709862-709950:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:712212-712449:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:713437-713534:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:714038-714101:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:714245-714381:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:714778-714849:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:715507-715600:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:716305-716348:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:717147-717367:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:717944-718062:1:exon

LEAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LEAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(723963..726113)
location: region:723963-726113:-1
so has part: feature:723963-726113:-1:exon
subclass of: SO_0000010

101815481
type: Gene
SIO_000068: ncbigene

position:723963:-1
position: 723963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726113:-1
position: 726113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723963-726113:-1:exon

LEAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LEAP2
product: liver expressed antimicrobial peptide 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053692.1
SIO_010081: LEAP2
subclass of: SO_0000673
so part of: LEAP2
location: complement(join(723963..724358,725390..725541,725963..726113))
location: region:723963-726113:-1
so has part: feature:725963-726113:-1:exon
so has part: feature:725390-725541:-1:exon
so has part: feature:723963-724358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:725963-726113:-1:exon

position:725963:-1
position: 725963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725390-725541:-1:exon

position:725390:-1
position: 725390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725541:-1
position: 725541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723963-724358:-1:exon

position:724358:-1
position: 724358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LEAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LEAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: liver-expressed antimicrobial peptide 2
translation: MHWWKVMAALLLCSLLLSQSHGVSLSLSPSLQQPRSPRQRRMTPFWRGVSLRPIGASCRDNSECLTMLCRKNRCLLSTASA
SIO_010081: LEAP2
subclass of: SO_0000673
so part of: LEAP2
location: complement(join(724322..724358,725390..725541,725963..726019))
location: region:724322-726019:-1
so has part: feature:725963-726019:-1:exon
so has part: feature:725390-725541:-1:exon
so has part: feature:724322-724358:-1:exon

XP_005053749.1
type: Protein
SIO_000068: ncbiprotein

position:724322:-1
position: 724322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726019:-1
position: 726019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725963-726019:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:725390-725541:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724322-724358:-1:exon

LOC101815283
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101815283
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(730470..731654)
location: region:730470-731654:-1
so has part: feature:730470-731654:-1:exon
subclass of: SO_0000010

101815283
type: Gene
SIO_000068: ncbigene

position:730470:-1
position: 730470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731654:-1
position: 731654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730470-731654:-1:exon

LOC101815283
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101815283
product: cytochrome b-c1 complex subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005053691.2
SIO_010081: LOC101815283
subclass of: SO_0000673
so part of: LOC101815283
location: complement(join(730470..730685,731367..731654))
location: region:730470-731654:-1
so has part: feature:731367-731654:-1:exon
so has part: feature:730470-730685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:731367-731654:-1:exon

position:731367:-1
position: 731367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:730470-730685:-1:exon

position:730685:-1
position: 730685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101815283
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101815283
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b-c1 complex subunit 8
translation: MGKHFGNLARVRHVITYSLSPFEQQAFPNIVSHGVPNVGRRFASQVLKVVPPLAIGYLIYSWGTQEFERLKRKNPADYEHEQ
SIO_010081: LOC101815283
subclass of: SO_0000673
so part of: LOC101815283
location: complement(join(730591..730685,731367..731520))
location: region:730591-731520:-1
so has part: feature:731367-731520:-1:exon
so has part: feature:730591-730685:-1:exon

XP_005053748.1
type: Protein
SIO_000068: ncbiprotein

position:730591:-1
position: 730591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731520:-1
position: 731520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:731367-731520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:730591-730685:-1:exon

GDF9
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GDF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(734127..737144)
location: region:734127-737144:-1
so has part: feature:734127-737144:-1:exon
subclass of: SO_0000010

101815085
type: Gene
SIO_000068: ncbigene

position:734127:-1
position: 734127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737144:-1
position: 737144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734127-737144:-1:exon

GDF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GDF9
product: growth differentiation factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005053690.1
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(734127..735561,736672..737144))
location: region:734127-737144:-1
so has part: feature:736672-737144:-1:exon
so has part: feature:734127-735561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:736672-737144:-1:exon

position:736672:-1
position: 736672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:734127-735561:-1:exon

position:735561:-1
position: 735561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GDF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth/differentiation factor 9
translation: MESTWRICVCLYCCLPWLSAGTQSSPHSRGRGGSEEPPEFLAAPEDAASQLSAVLQLPQSRAPAHALLPPLLEVLHDRGSRGWHSEVPRLQPDSRALRYMKRLYRMSATREGIPKAQRGRLYNTVRLFTPCWECEHGHPGKGDVHSVDLLFNLDRVTALEHLLKSVLLYSFDTSVPTSSSITCMCHLSLKEHDFSGQVCPSISHSLAFSLHFDVRRRKWVEMDVTSFLQPLIAANRRNVRMALNFTCVTGDPQRSTELANAVNVTLVPPSLLLYLNDTSEQAYHRGSSLGHGGKSSSPLVEPPKGGKAQGTPQGKRASRQRRNDPKATPAPSPHNLSEYLKQLVFPQHECKLHNFRLSFSQLRWDRWIIAPHRYSPQFCRGDCPRALGQRYGSPVHTMVQTLIYERLDPAVPRPSCVPAAYSPLSVLTIEPDGSIAYKEYEDMIATRCTCR
SIO_010081: GDF9
subclass of: SO_0000673
so part of: GDF9
location: complement(join(734630..735561,736672..737095))
location: region:734630-737095:-1
so has part: feature:736672-737095:-1:exon
so has part: feature:734630-735561:-1:exon

XP_005053747.1
type: Protein
SIO_000068: ncbiprotein

position:734630:-1
position: 734630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737095:-1
position: 737095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736672-737095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:734630-735561:-1:exon

C1QTNF2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: C1QTNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 737627..747271
location: region:737627-747271:1
so has part: feature:737627-747271:1:exon
subclass of: SO_0000010

101814683
type: Gene
SIO_000068: ncbigene

position:737627:1
position: 737627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747271:1
position: 747271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737627-747271:1:exon

C1QTNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: C1QTNF2
product: C1q and tumor necrosis factor related protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005053688.2
SIO_010081: C1QTNF2
subclass of: SO_0000673
so part of: C1QTNF2
location: join(737627..737663,737760..737901,741312..741891,744414..744812,745927..747271)
location: region:737627-747271:1
so has part: feature:737627-737663:1:exon
so has part: feature:737760-737901:1:exon
so has part: feature:741312-741891:1:exon
so has part: feature:744414-744812:1:exon
so has part: feature:745927-747271:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:737627-737663:1:exon

position:737663:1
position: 737663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:737760-737901:1:exon

position:737760:1
position: 737760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737901:1
position: 737901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:741312-741891:1:exon

position:741312:1
position: 741312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741891:1
position: 741891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:744414-744812:1:exon

position:744414:1
position: 744414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744812:1
position: 744812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:745927-747271:1:exon

position:745927:1
position: 745927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C1QTNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: C1QTNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q tumor necrosis factor-related protein 2
translation: MSQVLGIASHQANSSPTLPRQPKNLPFPFGFPQQWCHSCSTPRLLPAGCAMISAALLLWTVPCVANHILGGFGRRELQEGAQLACSLPGPPGPPGPPGLPGAPGTVGRMGFPGKDGKDGQDGDKGEHGDQGPQGKTGNPGKPGPKGKTGALGKAGPRGPKGLKGNPGKIGAPGKKGPKGSQGEPGLPGPCSCSGSRAKSAFSVAVSKSYPRERLPIKFDRILMNEGGHYNASSGKFICSIPGIYYFTYDITLANKHLAIGLVHNGQYRIKTFDANTGNHDVASGSTILALKQEDEVWLQIFYSEQNGLFYDPYWTDSLFTGFLIYPDQDYLNEV
SIO_010081: C1QTNF2
subclass of: SO_0000673
so part of: C1QTNF2
location: join(744422..744812,745927..746540)
location: region:744422-746540:1
so has part: feature:744422-744812:1:exon
so has part: feature:745927-746540:1:exon

XP_005053745.2
type: Protein
SIO_000068: ncbiprotein

position:744422:1
position: 744422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746540:1
position: 746540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744422-744812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:745927-746540:1:exon

FABP6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FABP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(747424..749581)
location: region:747424-749581:-1
so has part: feature:747424-749581:-1:exon
subclass of: SO_0000010

101814891
type: Gene
SIO_000068: ncbigene

position:747424:-1
position: 747424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749581:-1
position: 749581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747424-749581:-1:exon

FABP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FABP6
product: fatty acid binding protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016301729.1
SIO_010081: FABP6
subclass of: SO_0000673
so part of: FABP6
location: complement(join(747424..748253,749070..749581))
location: region:747424-749581:-1
so has part: feature:749070-749581:-1:exon
so has part: feature:747424-748253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749070-749581:-1:exon

position:749070:-1
position: 749070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:747424-748253:-1:exon

position:748253:-1
position: 748253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FABP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FABP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gastrotropin
translation: MAFAGKYEFEGDENYDAFVQKIGLPSDKAEMGRNCKIVTEVVQNGNDFTWTQHFPGGRTTTNSFTVGTEADMETMGGKKFKVNPWSSSAPQPQLHLDLG
SIO_010081: FABP6
subclass of: SO_0000673
so part of: FABP6
location: complement(join(748021..748253,749070..749136))
location: region:748021-749136:-1
so has part: feature:749070-749136:-1:exon
so has part: feature:748021-748253:-1:exon

XP_016157215.1
type: Protein
SIO_000068: ncbiprotein

position:748021:-1
position: 748021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749136:-1
position: 749136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749070-749136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748021-748253:-1:exon

PWWP2A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PWWP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 768069..789861
location: region:768069-789861:1
so has part: feature:768069-789861:1:exon
subclass of: SO_0000010

101812055
type: Gene
SIO_000068: ncbigene

position:768069:1
position: 768069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789861:1
position: 789861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:768069-789861:1:exon

PWWP2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PWWP2A
product: PWWP domain containing 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016301658.1
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(768069..768166,778298..780010,788876..789861)
location: region:768069-789861:1
so has part: feature:768069-768166:1:exon
so has part: feature:778298-780010:1:exon
so has part: feature:788876-789861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:768069-768166:1:exon

position:768166:1
position: 768166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778298-780010:1:exon

position:778298:1
position: 778298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780010:1
position: 780010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:788876-789861:1:exon

position:788876:1
position: 788876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PWWP2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PWWP2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PWWP domain-containing protein 2A
translation: MDLSKRFGPHGIPVTIFPKREYKDKPEAMQLQSKAFQEEAQVKCEADAAVPDDSSLTQPSEPSIAKSLWTSKPPPLFHEGAPYPPPLFIRDTYNQSIPQPPPRKIKRPKRKMYREEPTSIMNAIKLRPRQVLCDKCKNSVVAEKKEIKKGGNASDSSKYEDSKKRRNESVTTVNKKLKTDHKVDGKSQNESQKRNAVVKVSNIAHSRSRVVKVSAQANTSKAQLNTKKVLQSKNMDHAKAREVLKMAKEKAQKKQSATSSSKNAHSKVHFTRRLQNTSSGSLPPRLRLKPQRYRNEENDSSLKTGLEKIRSGKMATKPQSRCSSTRSAGEAPSESQSPSEGPEEASSEVQDTSEVHVTVEQDEQQTLGKRGSKSNITVYMTLNQKKSDSSSASVCSSDSTDDLKSTNSECSSTESFDFPPGSMHAPSSSSSSSSSSSSSKEEKKLSNSLKTEVFSKNVSKCVTPDGRTVCVGDIVWAKIYGFPWWPARILTITVSRKDSGLLVRQEARISWFGSTTTSFLALAQLSPFLESFQVRFNKKRKGLYRKAVTEAAKAAKQLTPEVRALLTQFET
SIO_010081: PWWP2A
subclass of: SO_0000673
so part of: PWWP2A
location: join(768150..768166,778298..779996)
location: region:768150-779996:1
so has part: feature:768150-768166:1:exon
so has part: feature:778298-779996:1:exon

XP_016157144.1
type: Protein
SIO_000068: ncbiprotein

position:768150:1
position: 768150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779996:1
position: 779996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:768150-768166:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778298-779996:1:exon

TTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(798459..817056)
location: region:798459-817056:-1
so has part: feature:798459-817056:-1:exon
subclass of: SO_0000010

101814481
type: Gene
SIO_000068: ncbigene

position:798459:-1
position: 798459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817056:-1
position: 817056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798459-817056:-1:exon

TTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TTC1
product: tetratricopeptide repeat domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005053687.1
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(798459..798697,803145..803199,805310..805458,807218..807254,807461..807573,808591..808651,816733..817056))
location: region:798459-817056:-1
so has part: feature:816733-817056:-1:exon
so has part: feature:808591-808651:-1:exon
so has part: feature:807461-807573:-1:exon
so has part: feature:807218-807254:-1:exon
so has part: feature:805310-805458:-1:exon
so has part: feature:803145-803199:-1:exon
so has part: feature:798459-798697:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:816733-817056:-1:exon

position:816733:-1
position: 816733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808591-808651:-1:exon

position:808591:-1
position: 808591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808651:-1
position: 808651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:807461-807573:-1:exon

position:807461:-1
position: 807461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807573:-1
position: 807573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:807218-807254:-1:exon

position:807218:-1
position: 807218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807254:-1
position: 807254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:805310-805458:-1:exon

position:805310:-1
position: 805310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805458:-1
position: 805458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:803145-803199:-1:exon

position:803145:-1
position: 803145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803199:-1
position: 803199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:798459-798697:-1:exon

position:798697:-1
position: 798697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 1
translation: MEEFKDASPPEELLNHLKLSDGKAAEAGPRDGQQPRGSGSGCAPCPGQDPTEESFHDCHDSFEAKGAVLDDEGNVQEDGSSSKKQTEVDEEYLLELEKDMPEEEKQRRRKESTGLKEKGNEHFKKGDYGEAEESYTKALQICPACFQKDRAVLFSNRAAAKMKQDKTEAALSDCTKAVELDPHYIRALLRRAELYEKTEKLDEALEDYKAVLEKDPSVHQAREACMRLPQQIEERNEKLKKEMLGKLKDLGNLVLRPFGLSTENFQIKQDSSTGSYSINFVQNPNNNR
SIO_010081: TTC1
subclass of: SO_0000673
so part of: TTC1
location: complement(join(798564..798697,803145..803199,805310..805458,807218..807254,807461..807573,808591..808651,816733..817050))
location: region:798564-817050:-1
so has part: feature:816733-817050:-1:exon
so has part: feature:808591-808651:-1:exon
so has part: feature:807461-807573:-1:exon
so has part: feature:807218-807254:-1:exon
so has part: feature:805310-805458:-1:exon
so has part: feature:803145-803199:-1:exon
so has part: feature:798564-798697:-1:exon

XP_005053744.1
type: Protein
SIO_000068: ncbiprotein

position:798564:-1
position: 798564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817050:-1
position: 817050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816733-817050:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808591-808651:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:807461-807573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:807218-807254:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805310-805458:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:803145-803199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:798564-798697:-1:exon

ADRA1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ADRA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(822794..834800)
location: region:822794-834800:-1
so has part: feature:822794-834800:-1:exon
subclass of: SO_0000010

101814297
type: Gene
SIO_000068: ncbigene

position:822794:-1
position: 822794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834800:-1
position: 834800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822794-834800:-1:exon

ADRA1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ADRA1B
product: adrenoceptor alpha 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005053686.2
SIO_010081: ADRA1B
subclass of: SO_0000673
so part of: ADRA1B
location: complement(join(822794..823666,833481..834800))
location: region:822794-834800:-1
so has part: feature:833481-834800:-1:exon
so has part: feature:822794-823666:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:833481-834800:-1:exon

position:833481:-1
position: 833481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:822794-823666:-1:exon

position:823666:-1
position: 823666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADRA1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ADRA1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-1B adrenergic receptor
translation: MIFKMNTYLGDKSNTSIPGYVKGSALNYGNFSANNSNETGSNLDSPALATSRAIIVGLILGAFILFAIIGNILVILSVACNRHLRIPTNYFIVNLAIADLLLSFTVLPFSATLEVLGYWVLGRIFCDIWAAVDVLCCTASILSLCAISIDRYIGVRYSLQYPTLVTRRRAILALLGVWLLSMVISIGPLLGWKEPAPQDDRECRITEEPFYALFSSLGSFYIPLIVILVMYCRVYIVAKRTTRNLEAGVMKEMSNSKELTLRIHYKHEDTLNNTRSKGHNPRNSLAFKLLKFSREKKAAKTLGIVVGMFILCWLPFFIVLPLGSLFSALKPPETIFKVIFWLGYFNSCLNPIIYPCSSKEFKRAFIQILRCQCHRRKQLGWWPYSYRNWRRCSLEQGRRDSLEDSGSFLSGSQRTLSSASPSPGYVSRISQPQLELCTLQGCSNCSSLLSPARQPSGQQGHCQFFTFQLLPQHNGHGPAASQGSGCEPTGTP
SIO_010081: ADRA1B
subclass of: SO_0000673
so part of: ADRA1B
location: complement(join(823155..823666,833481..834447))
location: region:823155-834447:-1
so has part: feature:833481-834447:-1:exon
so has part: feature:823155-823666:-1:exon

XP_005053743.1
type: Protein
SIO_000068: ncbiprotein

position:823155:-1
position: 823155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834447:-1
position: 834447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833481-834447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823155-823666:-1:exon

IL12B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: IL12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 857758..905555
location: region:857758-905555:1
so has part: feature:857758-905555:1:exon
subclass of: SO_0000010

101814108
type: Gene
SIO_000068: ncbigene

position:857758:1
position: 857758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905555:1
position: 905555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857758-905555:1:exon

IL12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IL12B
product: interleukin 12B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 44% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005053685.2
SIO_010081: IL12B
subclass of: SO_0000673
so part of: IL12B
location: join(857758..857813,895304..895383,898971..899055,899845..900120,900793..900910,902773..902966,903664..903809,905433..905555)
location: region:857758-905555:1
so has part: feature:857758-857813:1:exon
so has part: feature:895304-895383:1:exon
so has part: feature:898971-899055:1:exon
so has part: feature:899845-900120:1:exon
so has part: feature:900793-900910:1:exon
so has part: feature:902773-902966:1:exon
so has part: feature:903664-903809:1:exon
so has part: feature:905433-905555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:857758-857813:1:exon

position:857813:1
position: 857813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:895304-895383:1:exon

position:895304:1
position: 895304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895383:1
position: 895383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:898971-899055:1:exon

position:898971:1
position: 898971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899055:1
position: 899055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:899845-900120:1:exon

position:899845:1
position: 899845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900120:1
position: 900120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:900793-900910:1:exon

position:900793:1
position: 900793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900910:1
position: 900910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:902773-902966:1:exon

position:902773:1
position: 902773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902966:1
position: 902966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:903664-903809:1:exon

position:903664:1
position: 903664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903809:1
position: 903809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:905433-905555:1:exon

position:905433:1
position: 905433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IL12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-12 subunit beta
translation: MDKSGLFKDWMKQNLSAPDFGTRTLFPSHPSQPSAAAPARGSQETMSHLLCALLSLLSFAALLESAQWKLQENVLVIESQWDAEAPASSVELTCDSSEEQVYWEKDSEWKQEGKTLTAAVKEFPDAGNYSCLSQQSHKVLSSHLLLIAKINSQGQMLRWILKSFKGSSETFLKCEAKNYSGIFTCSWMTENKSPDVKFTIRSLKGPQGDVSCSSPVAVTEGALTTYTAQCHKESFCPFAEEHQPIDIFLEVIDLVEYENYSASFFIRDIIKPDPPQCQYVATNGTVTWAYPRTWSTPNSYFPLTFKVKVKRPRKHRYQVYDTEEQSLQLAAPGPAEVWLQARDCCYLSSWSEWSSPCR
SIO_010081: IL12B
subclass of: SO_0000673
so part of: IL12B
location: join(857759..857813,895304..895383,898971..899055,899845..900120,900793..900910,902773..902966,903664..903809,905433..905555)
location: region:857759-905555:1
so has part: feature:857759-857813:1:exon
so has part: feature:895304-895383:1:exon
so has part: feature:898971-899055:1:exon
so has part: feature:899845-900120:1:exon
so has part: feature:900793-900910:1:exon
so has part: feature:902773-902966:1:exon
so has part: feature:903664-903809:1:exon
so has part: feature:905433-905555:1:exon

XP_005053742.2
type: Protein
SIO_000068: ncbiprotein

position:857759:1
position: 857759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857759-857813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895304-895383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:898971-899055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899845-900120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:900793-900910:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902773-902966:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903664-903809:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:905433-905555:1:exon

LOC101813910
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101813910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 914738..919100
location: region:914738-919100:1
so has part: feature:914738-919100:1:exon
subclass of: SO_0000010

101813910
type: Gene
SIO_000068: ncbigene

position:914738:1
position: 914738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919100:1
position: 919100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914738-919100:1:exon

LOC101813910
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101813910
product: serine protease inhibitor Kazal-type 6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053684.2
SIO_010081: LOC101813910
subclass of: SO_0000673
so part of: LOC101813910
location: join(914738..915006,917049..917080,918085..918212,918964..919100)
location: region:914738-919100:1
so has part: feature:914738-915006:1:exon
so has part: feature:917049-917080:1:exon
so has part: feature:918085-918212:1:exon
so has part: feature:918964-919100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914738-915006:1:exon

position:915006:1
position: 915006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:917049-917080:1:exon

position:917049:1
position: 917049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917080:1
position: 917080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918085-918212:1:exon

position:918085:1
position: 918085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918212:1
position: 918212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918964-919100:1:exon

position:918964:1
position: 918964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101813910
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101813910
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease inhibitor Kazal-type 6-like
translation: MATLGTLQGLSLALAQPSSVLAMKVSGSLLLLALAALCLALSTTHAATHNEVDCSEYRRLERGRPIYCERLYQPFCGSDGKTYNNKCSFCKAVLRSRGALHMKQAGAC
SIO_010081: LOC101813910
subclass of: SO_0000673
so part of: LOC101813910
location: join(914886..915006,917049..917080,918085..918212,918964..919009)
location: region:914886-919009:1
so has part: feature:914886-915006:1:exon
so has part: feature:917049-917080:1:exon
so has part: feature:918085-918212:1:exon
so has part: feature:918964-919009:1:exon

XP_005053741.1
type: Protein
SIO_000068: ncbiprotein

position:914886:1
position: 914886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:919009:1
position: 919009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914886-915006:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:917049-917080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918085-918212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918964-919009:1:exon

FBXO38
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 928643..949118
location: region:928643-949118:1
so has part: feature:928643-949118:1:exon
subclass of: SO_0000010

101813300
type: Gene
SIO_000068: ncbigene

position:928643:1
position: 928643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949118:1
position: 949118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928643-949118:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FBXO38
product: F-box protein 38, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053680.2
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(928643..928782,929758..929891,931369..931532,931850..932015,932345..932482,932754..932891,933240..933333,933583..933713,933970..934140,934369..934511,935435..935663,936439..936558,937263..937442,938370..939050,940619..940719,940883..940985,941911..942077,943297..943442,944122..944225,944429..944542,947250..949117)
location: region:928643-949117:1
so has part: feature:928643-928782:1:exon
so has part: feature:929758-929891:1:exon
so has part: feature:931369-931532:1:exon
so has part: feature:931850-932015:1:exon
so has part: feature:932345-932482:1:exon
so has part: feature:932754-932891:1:exon
so has part: feature:933240-933333:1:exon
so has part: feature:933583-933713:1:exon
so has part: feature:933970-934140:1:exon
so has part: feature:934369-934511:1:exon
so has part: feature:935435-935663:1:exon
so has part: feature:936439-936558:1:exon
so has part: feature:937263-937442:1:exon
so has part: feature:938370-939050:1:exon
so has part: feature:940619-940719:1:exon
so has part: feature:940883-940985:1:exon
so has part: feature:941911-942077:1:exon
so has part: feature:943297-943442:1:exon
so has part: feature:944122-944225:1:exon
so has part: feature:944429-944542:1:exon
so has part: feature:947250-949117:1:exon

position:949117:1
position: 949117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928643-928782:1:exon

position:928782:1
position: 928782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929758-929891:1:exon

position:929758:1
position: 929758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929891:1
position: 929891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:931369-931532:1:exon

position:931369:1
position: 931369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931532:1
position: 931532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:931850-932015:1:exon

position:931850:1
position: 931850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932015:1
position: 932015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:932345-932482:1:exon

position:932345:1
position: 932345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932482:1
position: 932482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:932754-932891:1:exon

position:932754:1
position: 932754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932891:1
position: 932891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:933240-933333:1:exon

position:933240:1
position: 933240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933333:1
position: 933333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:933583-933713:1:exon

position:933583:1
position: 933583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933713:1
position: 933713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:933970-934140:1:exon

position:933970:1
position: 933970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934140:1
position: 934140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:934369-934511:1:exon

position:934369:1
position: 934369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934511:1
position: 934511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:935435-935663:1:exon

position:935435:1
position: 935435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935663:1
position: 935663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:936439-936558:1:exon

position:936439:1
position: 936439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936558:1
position: 936558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:937263-937442:1:exon

position:937263:1
position: 937263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937442:1
position: 937442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:938370-939050:1:exon

position:938370:1
position: 938370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939050:1
position: 939050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:940619-940719:1:exon

position:940619:1
position: 940619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940719:1
position: 940719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:940883-940985:1:exon

position:940883:1
position: 940883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940985:1
position: 940985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:941911-942077:1:exon

position:941911:1
position: 941911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:942077:1
position: 942077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:943297-943442:1:exon

position:943297:1
position: 943297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943442:1
position: 943442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:944122-944225:1:exon

position:944122:1
position: 944122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944225:1
position: 944225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:944429-944542:1:exon

position:944429:1
position: 944429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:944542:1
position: 944542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:947250-949117:1:exon

position:947250:1
position: 947250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X1
translation: MGPRRKTVKASAASREGAESTKAEEPKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVKVVDLCAGRWWEYMPTGFTDSSFLTLLRKMPDIEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWSRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNNNPNIHHNNHQHPNEQNEENELHQEGPAEEQQIGAEALNEMEEVAQEEGEAAGQGQDELPAPSQAVVPMEVDEEQAGPSGIQPVVKATPITIHDSDSEDEEENMGTSRVCISNSIAQSYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSTSHGGQAKQFPLEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSCSGAPAAPSSCSAAAPSPDCAQAAQSHSAGSSPAAGEECRQCGCSPCRRDGCSERQPEESPVCSRCSSRARQRRTSGGRGGDSPSTSGACRDGPDFALRTLPDCGAAGEPGDHRTSGSACGAGSQEQSTQPPGWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRRGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(928655..928782,929758..929891,931369..931532,931850..932015,932345..932482,932754..932891,933240..933333,933583..933713,933970..934140,934369..934511,935435..935663,936439..936558,937263..937442,938370..939050,940619..940719,940883..940985,941911..942077,943297..943442,944122..944225,944429..944542,947250..947428)
location: region:928655-947428:1
so has part: feature:928655-928782:1:exon
so has part: feature:929758-929891:1:exon
so has part: feature:931369-931532:1:exon
so has part: feature:931850-932015:1:exon
so has part: feature:932345-932482:1:exon
so has part: feature:932754-932891:1:exon
so has part: feature:933240-933333:1:exon
so has part: feature:933583-933713:1:exon
so has part: feature:933970-934140:1:exon
so has part: feature:934369-934511:1:exon
so has part: feature:935435-935663:1:exon
so has part: feature:936439-936558:1:exon
so has part: feature:937263-937442:1:exon
so has part: feature:938370-939050:1:exon
so has part: feature:940619-940719:1:exon
so has part: feature:940883-940985:1:exon
so has part: feature:941911-942077:1:exon
so has part: feature:943297-943442:1:exon
so has part: feature:944122-944225:1:exon
so has part: feature:944429-944542:1:exon
so has part: feature:947250-947428:1:exon

XP_005053737.1
type: Protein
SIO_000068: ncbiprotein

position:928655:1
position: 928655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947428:1
position: 947428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928655-928782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929758-929891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931369-931532:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:931850-932015:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932345-932482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:932754-932891:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:933240-933333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:933583-933713:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:933970-934140:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:934369-934511:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:935435-935663:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:936439-936558:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:937263-937442:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:938370-939050:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:940619-940719:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:940883-940985:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:941911-942077:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:943297-943442:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:944122-944225:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:944429-944542:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:947250-947428:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FBXO38
product: F-box protein 38, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005053682.2
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(929806..929891,931445..931532,932345..932482,932754..932891,933240..933333,933583..933713,933970..934140,934369..934511,935435..935663,936439..936558,937263..937442,938370..939050,940619..940719,940883..940985,941911..942077,943297..943442,944122..944225,944429..944542,947250..949116)
location: region:929806-949116:1
so has part: feature:929806-929891:1:exon
so has part: feature:931445-931532:1:exon
so has part: feature:932345-932482:1:exon
so has part: feature:932754-932891:1:exon
so has part: feature:933240-933333:1:exon
so has part: feature:933583-933713:1:exon
so has part: feature:933970-934140:1:exon
so has part: feature:934369-934511:1:exon
so has part: feature:935435-935663:1:exon
so has part: feature:936439-936558:1:exon
so has part: feature:937263-937442:1:exon
so has part: feature:938370-939050:1:exon
so has part: feature:940619-940719:1:exon
so has part: feature:940883-940985:1:exon
so has part: feature:941911-942077:1:exon
so has part: feature:943297-943442:1:exon
so has part: feature:944122-944225:1:exon
so has part: feature:944429-944542:1:exon
so has part: feature:947250-949116:1:exon

position:929806:1
position: 929806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949116:1
position: 949116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929806-929891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931445-931532:1:exon

position:931445:1
position: 931445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:932345-932482:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932754-932891:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933240-933333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933583-933713:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:933970-934140:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:934369-934511:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:935435-935663:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:936439-936558:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:937263-937442:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:938370-939050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:940619-940719:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:940883-940985:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:941911-942077:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:943297-943442:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:944122-944225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:944429-944542:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:947250-949116:1:exon

FBXO38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FBXO38
product: F-box protein 38, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016301666.1
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(929913..930291,931369..931532,931850..932015,932345..932482,932754..932891,933240..933333,933583..933713,933970..934140,934369..934511,935435..935663,936439..936558,937263..937442,938370..939050,940619..940719,940883..940985,941911..942077,943297..943442,944122..944225,944429..944542,947250..949118)
location: region:929913-949118:1
so has part: feature:929913-930291:1:exon
so has part: feature:931369-931532:1:exon
so has part: feature:931850-932015:1:exon
so has part: feature:932345-932482:1:exon
so has part: feature:932754-932891:1:exon
so has part: feature:933240-933333:1:exon
so has part: feature:933583-933713:1:exon
so has part: feature:933970-934140:1:exon
so has part: feature:934369-934511:1:exon
so has part: feature:935435-935663:1:exon
so has part: feature:936439-936558:1:exon
so has part: feature:937263-937442:1:exon
so has part: feature:938370-939050:1:exon
so has part: feature:940619-940719:1:exon
so has part: feature:940883-940985:1:exon
so has part: feature:941911-942077:1:exon
so has part: feature:943297-943442:1:exon
so has part: feature:944122-944225:1:exon
so has part: feature:944429-944542:1:exon
so has part: feature:947250-949118:1:exon

position:929913:1
position: 929913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929913-930291:1:exon

position:930291:1
position: 930291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:931369-931532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931850-932015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932345-932482:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932754-932891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933240-933333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:933583-933713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:933970-934140:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:934369-934511:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:935435-935663:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:936439-936558:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:937263-937442:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:938370-939050:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:940619-940719:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:940883-940985:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:941911-942077:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:943297-943442:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:944122-944225:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:944429-944542:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:947250-949118:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X2
translation: MPTGFTDSSFLTLLRKMPDIEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWSRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNNNPNIHHNNHQHPNEQNEENELHQEGPAEEQQIGAEALNEMEEVAQEEGEAAGQGQDELPAPSQAVVPMEVDEEQAGPSGIQPVVKATPITIHDSDSEDEEENMGTSRVCISNSIAQSYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSTSHGGQAKQFPLEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSCSGAPAAPSSCSAAAPSPDCAQAAQSHSAGSSPAAGEECRQCGCSPCRRDGCSERQPEESPVCSRCSSRARQRRTSGGRGGDSPSTSGACRDGPDFALRTLPDCGAAGEPGDHRTSGSACGAGSQEQSTQPPGWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRRGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(930282..930291,931369..931532,931850..932015,932345..932482,932754..932891,933240..933333,933583..933713,933970..934140,934369..934511,935435..935663,936439..936558,937263..937442,938370..939050,940619..940719,940883..940985,941911..942077,943297..943442,944122..944225,944429..944542,947250..947428)
location: region:930282-947428:1
so has part: feature:930282-930291:1:exon
so has part: feature:931369-931532:1:exon
so has part: feature:931850-932015:1:exon
so has part: feature:932345-932482:1:exon
so has part: feature:932754-932891:1:exon
so has part: feature:933240-933333:1:exon
so has part: feature:933583-933713:1:exon
so has part: feature:933970-934140:1:exon
so has part: feature:934369-934511:1:exon
so has part: feature:935435-935663:1:exon
so has part: feature:936439-936558:1:exon
so has part: feature:937263-937442:1:exon
so has part: feature:938370-939050:1:exon
so has part: feature:940619-940719:1:exon
so has part: feature:940883-940985:1:exon
so has part: feature:941911-942077:1:exon
so has part: feature:943297-943442:1:exon
so has part: feature:944122-944225:1:exon
so has part: feature:944429-944542:1:exon
so has part: feature:947250-947428:1:exon

XP_016157152.1
type: Protein
SIO_000068: ncbiprotein

position:930282:1
position: 930282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930282-930291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:931369-931532:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:931850-932015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:932345-932482:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:932754-932891:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933240-933333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:933583-933713:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:933970-934140:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:934369-934511:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:935435-935663:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:936439-936558:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:937263-937442:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:938370-939050:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:940619-940719:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:940883-940985:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:941911-942077:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:943297-943442:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:944122-944225:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:944429-944542:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:947250-947428:1:exon

FBXO38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FBXO38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 38 isoform X3
translation: MLRHLYLKWVRLTKPQPFKDFLCISLRAFVMRNCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQCKMTSTDLVRYGLADVVENPGIITDIGMKAVNEVFSFIKYLVIYNCPHLHNPNNWITDHSRWSRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDNDNNNNHQNNNNNNPNIHHNNHQHPNEQNEENELHQEGPAEEQQIGAEALNEMEEVAQEEGEAAGQGQDELPAPSQAVVPMEVDEEQAGPSGIQPVVKATPITIHDSDSEDEEENMGTSRVCISNSIAQSYSDGEEKSRDPVETREPSVSGKGKTPLRKRCSTSHGGQAKQFPLEESSCEKGCQVTSEQIKADMKAASDMPERSKSKDSYGSCSGAPAAPSSCSAAAPSPDCAQAAQSHSAGSSPAAGEECRQCGCSPCRRDGCSERQPEESPVCSRCSSRARQRRTSGGRGGDSPSTSGACRDGPDFALRTLPDCGAAGEPGDHRTSGSACGAGSQEQSTQPPGWELDCKEEYPRRPLTRARSRLSHVPLVSEPEVAKPKPRQTTKRKRTADKSTSTSDPVIEDDHVQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHICIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYPKYPWGRDIYTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICMETIGEEISELRQVRRGVFQRVVAIFIHYCDVNGEPVEDDYI
SIO_010081: FBXO38
subclass of: SO_0000673
so part of: FBXO38
location: join(932377..932482,932754..932891,933240..933333,933583..933713,933970..934140,934369..934511,935435..935663,936439..936558,937263..937442,938370..939050,940619..940719,940883..940985,941911..942077,943297..943442,944122..944225,944429..944542,947250..947428)
location: region:932377-947428:1
so has part: feature:932377-932482:1:exon
so has part: feature:932754-932891:1:exon
so has part: feature:933240-933333:1:exon
so has part: feature:933583-933713:1:exon
so has part: feature:933970-934140:1:exon
so has part: feature:934369-934511:1:exon
so has part: feature:935435-935663:1:exon
so has part: feature:936439-936558:1:exon
so has part: feature:937263-937442:1:exon
so has part: feature:938370-939050:1:exon
so has part: feature:940619-940719:1:exon
so has part: feature:940883-940985:1:exon
so has part: feature:941911-942077:1:exon
so has part: feature:943297-943442:1:exon
so has part: feature:944122-944225:1:exon
so has part: feature:944429-944542:1:exon
so has part: feature:947250-947428:1:exon

XP_005053739.1
type: Protein
SIO_000068: ncbiprotein

position:932377:1
position: 932377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932377-932482:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:932754-932891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933240-933333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:933583-933713:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:933970-934140:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934369-934511:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:935435-935663:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:936439-936558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937263-937442:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:938370-939050:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:940619-940719:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:940883-940985:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:941911-942077:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:943297-943442:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:944122-944225:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:944429-944542:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:947250-947428:1:exon

HTR4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(953888..993594)
location: region:953888-993594:-1
so has part: feature:953888-993594:-1:exon
subclass of: SO_0000010

101812975
type: Gene
SIO_000068: ncbigene

position:953888:-1
position: 953888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993594:-1
position: 993594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953888-993594:-1:exon

HTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HTR4
product: 5-hydroxytryptamine receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301738.1
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(953888..954371,979165..979511,979636..979642,979735..979952,981249..981402,991514..991714,993327..993594))
location: region:953888-993594:-1
so has part: feature:993327-993594:-1:exon
so has part: feature:991514-991714:-1:exon
so has part: feature:981249-981402:-1:exon
so has part: feature:979735-979952:-1:exon
so has part: feature:979636-979642:-1:exon
so has part: feature:979165-979511:-1:exon
so has part: feature:953888-954371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:993327-993594:-1:exon

position:993327:-1
position: 993327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:991514-991714:-1:exon

position:991514:-1
position: 991514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991714:-1
position: 991714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:981249-981402:-1:exon

position:981249:-1
position: 981249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981402:-1
position: 981402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:979735-979952:-1:exon

position:979735:-1
position: 979735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979952:-1
position: 979952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:979636-979642:-1:exon

position:979636:-1
position: 979636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979642:-1
position: 979642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:979165-979511:-1:exon

position:979165:-1
position: 979165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979511:-1
position: 979511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:953888-954371:-1:exon

position:954371:-1
position: 954371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 4
translation: MKLLEACQSELCCLVFQPFVSPSSSEGFGVAGKILLLSFISAVILMAILGNLLVMVAVCRDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDNWVYGEMFCLVRTSLDVLLTTASILHLCCISLDRYYAICCQPLVYRNKMTPLRIAVMLGGCWVIPTFISFLPIMQGWNSIGIIDLIQQRQFNKASNSTYCIFMVNKPYAITCSVVAFYIPFLLMVLAYHRIYVTARAHARQIRLLQRAGNPQEPREPRPGDQHSSHRMKTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFINYTVPGKLWTAFLWLGYINSGLNPFLYAFLNKAFRRAFLIILCCGDERYRRPSVLGQSVPCSTTTINGSTHVLRYKVLHNGHHQEQEKLPIHADPESQESCF
SIO_010081: HTR4
subclass of: SO_0000673
so part of: HTR4
location: complement(join(954284..954371,979165..979511,979636..979642,979735..979952,981249..981402,991514..991714,993327..993520))
location: region:954284-993520:-1
so has part: feature:993327-993520:-1:exon
so has part: feature:991514-991714:-1:exon
so has part: feature:981249-981402:-1:exon
so has part: feature:979735-979952:-1:exon
so has part: feature:979636-979642:-1:exon
so has part: feature:979165-979511:-1:exon
so has part: feature:954284-954371:-1:exon

XP_016157224.1
type: Protein
SIO_000068: ncbiprotein

position:954284:-1
position: 954284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993520:-1
position: 993520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:993327-993520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:991514-991714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:981249-981402:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979735-979952:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:979636-979642:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979165-979511:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954284-954371:-1:exon

LOC107603934
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1057668..1061310)
location: region:1057668-1061310:-1
so has part: feature:1057668-1061310:-1:exon
subclass of: SO_0000010

107603934
type: Gene
SIO_000068: ncbigene

position:1057668:-1
position: 1057668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061310:-1
position: 1061310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057668-1061310:-1:exon

LOC107603934
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107603934
product: sulfate transporter-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301518.1
SIO_010081: LOC107603934
subclass of: SO_0000673
so part of: LOC107603934
location: complement(join(1057668..1059123,1061293..1061310))
location: region:1057668-1061310:-1
so has part: feature:1061293-1061310:-1:exon
so has part: feature:1057668-1059123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1061293-1061310:-1:exon

position:1061293:-1
position: 1061293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057668-1059123:-1:exon

position:1059123:-1
position: 1059123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107603934
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107603934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfate transporter-like
translation: MEVLGEIISTFINDNNRAASFKSTLYKQTGVNPLWVKAARKKAAKRMLKEKEAGSGEKQSSVPVDLGLEPVGFHTIVIDCCAVQFLDTAGIRTLQEVCRDYGDVGVRVLLAQCSPSVRSSLLRGDFFKEGEEQLLFHSVHQAVDFALGTHGAAKN
SIO_010081: LOC107603934
subclass of: SO_0000673
so part of: LOC107603934
location: complement(join(1058674..1059123,1061293..1061310))
location: region:1058674-1061310:-1
so has part: feature:1061293-1061310:-1:exon
so has part: feature:1058674-1059123:-1:exon

XP_016157004.1
type: Protein
SIO_000068: ncbiprotein

position:1058674:-1
position: 1058674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061293-1061310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058674-1059123:-1:exon

LOC101811856
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101811856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1061914..1074434)
location: region:1061914-1074434:-1
so has part: feature:1061914-1074434:-1:exon
subclass of: SO_0000010

101811856
type: Gene
SIO_000068: ncbigene

position:1061914:-1
position: 1061914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074434:-1
position: 1074434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1061914-1074434:-1:exon

LOC101811856
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811856
product: sulfate transporter, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016301702.1
SIO_010081: LOC101811856
subclass of: SO_0000673
so part of: LOC101811856
location: complement(join(1061914..1064410,1069217..1069840,1074233..1074434))
location: region:1061914-1074434:-1
so has part: feature:1074233-1074434:-1:exon
so has part: feature:1069217-1069840:-1:exon
so has part: feature:1061914-1064410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1074233-1074434:-1:exon

position:1074233:-1
position: 1074233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1069217-1069840:-1:exon

position:1069217:-1
position: 1069217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069840:-1
position: 1069840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1061914-1064410:-1:exon

position:1064410:-1
position: 1064410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101811856
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811856
product: sulfate transporter, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016301701.1
SIO_010081: LOC101811856
subclass of: SO_0000673
so part of: LOC101811856
location: complement(join(1061914..1064410,1069217..1069840,1073954..1074011,1074233..1074434))
location: region:1061914-1074434:-1
so has part: feature:1074233-1074434:-1:exon
so has part: feature:1073954-1074011:-1:exon
so has part: feature:1069217-1069840:-1:exon
so has part: feature:1061914-1064410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1074233-1074434:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1073954-1074011:-1:exon

position:1073954:-1
position: 1073954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074011:-1
position: 1074011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1069217-1069840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061914-1064410:-1:exon

LOC101811856
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811856
product: sulfate transporter, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016301703.1
SIO_010081: LOC101811856
subclass of: SO_0000673
so part of: LOC101811856
location: complement(join(1061914..1064410,1069217..1069840,1073206..1073289))
location: region:1061914-1073289:-1
so has part: feature:1073206-1073289:-1:exon
so has part: feature:1069217-1069840:-1:exon
so has part: feature:1061914-1064410:-1:exon

position:1073289:-1
position: 1073289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073206-1073289:-1:exon

position:1073206:-1
position: 1073206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1069217-1069840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061914-1064410:-1:exon

LOC101811856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfate transporter
translation: MAAMAETNNIHAAMEGPEDDAKCSFHHRIFLEPQEKKTSMKALLVKQAKKTCSCTPAKIKDCILGFFPILQWLPKYKLREDLLGDVMSGVIVGVLLVPQSIAYSLLAGLEPIYGLYTSFFSCIIYCIFGTSRHISVSIFGVVCLMVGQVVDREVERAGYDLQPVLSALPGDSNSTRNGTEPLCDKGCYAMAVAATLTFISGVYQVAMGFFQVGFVSVYLSDSLLSGFVTGASFTVLTSQVKYLLGLDIPRSGGIGSLVTTWINIFRSIHRTNICDLITSSLCFLVLIPAKELNERFKSKLKAPIPVELFVVVAATLASHFGKLRENYGSSVSGHIPTGFLPPRAPAWGLLPSVALDAIPVAIIGFAITVSLSEMFAKKHGYAVRANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCRTQMSGLVTSLVILLVLLVIAPLFYSLQKCVLAVITIVNLRGALRKFRDLPKMWRLSKVDTAIWGVTMAATALISTEIGLLVGVCFSMLCVIFRTQRPEAPLLGWAAESETYESLSAYKNLQTKPGVVVFRFEAPLYYINKECFKSTLYKQTGVNPLWVKAARKKAAKRMLKEKEAGSGEKQSSVPVDLGLEPVGFHTIVIDCCAVQFLDTAGIRTLQEVCRDYGDVGVRVLLAQCSPSVRSSLLRGDFFKEGEEQLLFHSVHQAVDFALGTHGAAKN
SIO_010081: LOC101811856
subclass of: SO_0000673
so part of: LOC101811856
location: complement(join(1062920..1064410,1069217..1069828))
location: region:1062920-1069828:-1
so has part: feature:1069217-1069828:-1:exon
so has part: feature:1062920-1064410:-1:exon

XP_016157187.1
type: Protein
SIO_000068: ncbiprotein

position:1062920:-1
position: 1062920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069828:-1
position: 1069828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069217-1069828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062920-1064410:-1:exon

LOC101811856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfate transporter
translation: MAAMAETNNIHAAMEGPEDDAKCSFHHRIFLEPQEKKTSMKALLVKQAKKTCSCTPAKIKDCILGFFPILQWLPKYKLREDLLGDVMSGVIVGVLLVPQSIAYSLLAGLEPIYGLYTSFFSCIIYCIFGTSRHISVSIFGVVCLMVGQVVDREVERAGYDLQPVLSALPGDSNSTRNGTEPLCDKGCYAMAVAATLTFISGVYQVAMGFFQVGFVSVYLSDSLLSGFVTGASFTVLTSQVKYLLGLDIPRSGGIGSLVTTWINIFRSIHRTNICDLITSSLCFLVLIPAKELNERFKSKLKAPIPVELFVVVAATLASHFGKLRENYGSSVSGHIPTGFLPPRAPAWGLLPSVALDAIPVAIIGFAITVSLSEMFAKKHGYAVRANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCRTQMSGLVTSLVILLVLLVIAPLFYSLQKCVLAVITIVNLRGALRKFRDLPKMWRLSKVDTAIWGVTMAATALISTEIGLLVGVCFSMLCVIFRTQRPEAPLLGWAAESETYESLSAYKNLQTKPGVVVFRFEAPLYYINKECFKSTLYKQTGVNPLWVKAARKKAAKRMLKEKEAGSGEKQSSVPVDLGLEPVGFHTIVIDCCAVQFLDTAGIRTLQEVCRDYGDVGVRVLLAQCSPSVRSSLLRGDFFKEGEEQLLFHSVHQAVDFALGTHGAAKN
SIO_010081: LOC101811856
subclass of: SO_0000673
so part of: LOC101811856
location: complement(join(1062920..1064410,1069217..1069828))
location: region:1062920-1069828:-1
so has part: feature:1069217-1069828:-1:exon
so has part: feature:1062920-1064410:-1:exon

XP_016157188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1069217-1069828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062920-1064410:-1:exon

LOC101811856
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811856
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfate transporter
translation: MAAMAETNNIHAAMEGPEDDAKCSFHHRIFLEPQEKKTSMKALLVKQAKKTCSCTPAKIKDCILGFFPILQWLPKYKLREDLLGDVMSGVIVGVLLVPQSIAYSLLAGLEPIYGLYTSFFSCIIYCIFGTSRHISVSIFGVVCLMVGQVVDREVERAGYDLQPVLSALPGDSNSTRNGTEPLCDKGCYAMAVAATLTFISGVYQVAMGFFQVGFVSVYLSDSLLSGFVTGASFTVLTSQVKYLLGLDIPRSGGIGSLVTTWINIFRSIHRTNICDLITSSLCFLVLIPAKELNERFKSKLKAPIPVELFVVVAATLASHFGKLRENYGSSVSGHIPTGFLPPRAPAWGLLPSVALDAIPVAIIGFAITVSLSEMFAKKHGYAVRANQEMYAIGFCNIIPSFFHCFTTSAALAKTLVKESTGCRTQMSGLVTSLVILLVLLVIAPLFYSLQKCVLAVITIVNLRGALRKFRDLPKMWRLSKVDTAIWGVTMAATALISTEIGLLVGVCFSMLCVIFRTQRPEAPLLGWAAESETYESLSAYKNLQTKPGVVVFRFEAPLYYINKECFKSTLYKQTGVNPLWVKAARKKAAKRMLKEKEAGSGEKQSSVPVDLGLEPVGFHTIVIDCCAVQFLDTAGIRTLQEVCRDYGDVGVRVLLAQCSPSVRSSLLRGDFFKEGEEQLLFHSVHQAVDFALGTHGAAKN
SIO_010081: LOC101811856
subclass of: SO_0000673
so part of: LOC101811856
location: complement(join(1062920..1064410,1069217..1069828))
location: region:1062920-1069828:-1
so has part: feature:1069217-1069828:-1:exon
so has part: feature:1062920-1064410:-1:exon

XP_016157189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1069217-1069828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062920-1064410:-1:exon

LOC101812586
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1077524..1083705)
location: region:1077524-1083705:-1
so has part: feature:1077524-1083705:-1:exon
subclass of: SO_0000010

101812586
type: Gene
SIO_000068: ncbigene

position:1077524:-1
position: 1077524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083705:-1
position: 1083705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077524-1083705:-1:exon

LOC101812586
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812586
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053677.1
SIO_010081: LOC101812586
subclass of: SO_0000673
so part of: LOC101812586
location: complement(join(1077524..1078032,1079073..1079104,1079581..1079720,1080837..1080859,1080976..1081209,1081803..1081898,1083005..1083705))
location: region:1077524-1083705:-1
so has part: feature:1083005-1083705:-1:exon
so has part: feature:1081803-1081898:-1:exon
so has part: feature:1080976-1081209:-1:exon
so has part: feature:1080837-1080859:-1:exon
so has part: feature:1079581-1079720:-1:exon
so has part: feature:1079073-1079104:-1:exon
so has part: feature:1077524-1078032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1083005-1083705:-1:exon

position:1083005:-1
position: 1083005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1081803-1081898:-1:exon

position:1081803:-1
position: 1081803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081898:-1
position: 1081898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1080976-1081209:-1:exon

position:1080976:-1
position: 1080976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081209:-1
position: 1081209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1080837-1080859:-1:exon

position:1080837:-1
position: 1080837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080859:-1
position: 1080859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1079581-1079720:-1:exon

position:1079581:-1
position: 1079581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079720:-1
position: 1079720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1079073-1079104:-1:exon

position:1079073:-1
position: 1079073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079104:-1
position: 1079104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1077524-1078032:-1:exon

position:1078032:-1
position: 1078032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101812586
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812586
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005053676.1
SIO_010081: LOC101812586
subclass of: SO_0000673
so part of: LOC101812586
location: complement(join(1077524..1078032,1078951..1078977,1079073..1079104,1079581..1079720,1080837..1080859,1080976..1081209,1081803..1081898,1083005..1083705))
location: region:1077524-1083705:-1
so has part: feature:1083005-1083705:-1:exon
so has part: feature:1081803-1081898:-1:exon
so has part: feature:1080976-1081209:-1:exon
so has part: feature:1080837-1080859:-1:exon
so has part: feature:1079581-1079720:-1:exon
so has part: feature:1079073-1079104:-1:exon
so has part: feature:1078951-1078977:-1:exon
so has part: feature:1077524-1078032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1083005-1083705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081803-1081898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080976-1081209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080837-1080859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079581-1079720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1079073-1079104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078951-1078977:-1:exon

position:1078951:-1
position: 1078951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078977:-1
position: 1078977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1077524-1078032:-1:exon

LOC101812586
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X3
translation: MAKAGEGCGGPGSLEAELTCPICLSVYQEPVSLGCGHSFCRPCLEEVLGTQQSSQGLSTCPTCRASLEPGVKLQKNFKLANIVEAFQATAPKGQEAGKKSLQQGKGSKKGKTSVVPCEYCLDGSQPAVKTCLVCEASLCQAHLSKHNAKGFNQGHVLVEVGAGKAEERRCQDHGKLLECYCLREETCICMLCSIAGAHKGHEVITMKEARDQELVKLSNIMTELQESKNYLVTGLEELQKSENQIKTNTKTLTSQLEELFKKIKTELDKKKRVILRDLQYNEEADLAIIADKRKKMEQKRDQAEQNLQALQKRKEQPDIFLFFKDLKLVTDRIASLNLYPEHVYVEEVQLDQNYTMSQFERQKQSFMWQLDCLLRDVRVRTCQLNEEQQENIM
SIO_010081: LOC101812586
subclass of: SO_0000673
so part of: LOC101812586
location: complement(join(1078018..1078032,1079073..1079104,1079581..1079720,1080837..1080859,1080976..1081209,1081803..1081898,1083005..1083646))
location: region:1078018-1083646:-1
so has part: feature:1083005-1083646:-1:exon
so has part: feature:1081803-1081898:-1:exon
so has part: feature:1080976-1081209:-1:exon
so has part: feature:1080837-1080859:-1:exon
so has part: feature:1079581-1079720:-1:exon
so has part: feature:1079073-1079104:-1:exon
so has part: feature:1078018-1078032:-1:exon

XP_005053734.1
type: Protein
SIO_000068: ncbiprotein

position:1078018:-1
position: 1078018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083646:-1
position: 1083646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083005-1083646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081803-1081898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080976-1081209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080837-1080859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079581-1079720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1079073-1079104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078018-1078032:-1:exon

LOC101812586
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X2
translation: MAKAGEGCGGPGSLEAELTCPICLSVYQEPVSLGCGHSFCRPCLEEVLGTQQSSQGLSTCPTCRASLEPGVKLQKNFKLANIVEAFQATAPKGQEAGKKSLQQGKGSKKGKTSVVPCEYCLDGSQPAVKTCLVCEASLCQAHLSKHNAKGFNQGHVLVEVGAGKAEERRCQDHGKLLECYCLREETCICMLCSIAGAHKGHEVITMKEARDQELVKLSNIMTELQESKNYLVTGLEELQKSENQIKTNTKTLTSQLEELFKKIKTELDKKKRVILRDLQYNEEADLAIIADKRKKMEQKRDQAEQNLQALQKRKEQPDIFLFFKDLKLVTDRIASLNLYPEHVYVEEVQLDQNYTMSQFERQKQSFMWQLDCLLRDVRVRTCQLNEEQQLLCLITPQNENIM
SIO_010081: LOC101812586
subclass of: SO_0000673
so part of: LOC101812586
location: complement(join(1078018..1078032,1078951..1078977,1079073..1079104,1079581..1079720,1080837..1080859,1080976..1081209,1081803..1081898,1083005..1083646))
location: region:1078018-1083646:-1
so has part: feature:1083005-1083646:-1:exon
so has part: feature:1081803-1081898:-1:exon
so has part: feature:1080976-1081209:-1:exon
so has part: feature:1080837-1080859:-1:exon
so has part: feature:1079581-1079720:-1:exon
so has part: feature:1079073-1079104:-1:exon
so has part: feature:1078951-1078977:-1:exon
so has part: feature:1078018-1078032:-1:exon

XP_005053733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1083005-1083646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081803-1081898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080976-1081209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080837-1080859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079581-1079720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1079073-1079104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1078951-1078977:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078018-1078032:-1:exon

LOC101812586
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812586
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016301705.1
SIO_010081: LOC101812586
subclass of: SO_0000673
so part of: LOC101812586
location: complement(join(1078984..1079104,1079581..1079720,1080837..1080859,1080976..1081209,1081803..1081898,1083005..1083705))
location: region:1078984-1083705:-1
so has part: feature:1083005-1083705:-1:exon
so has part: feature:1081803-1081898:-1:exon
so has part: feature:1080976-1081209:-1:exon
so has part: feature:1080837-1080859:-1:exon
so has part: feature:1079581-1079720:-1:exon
so has part: feature:1078984-1079104:-1:exon

position:1078984:-1
position: 1078984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083005-1083705:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081803-1081898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080976-1081209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080837-1080859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079581-1079720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1078984-1079104:-1:exon

LOC101812586
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812586
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
translation: MAKAGEGCGGPGSLEAELTCPICLSVYQEPVSLGCGHSFCRPCLEEVLGTQQSSQGLSTCPTCRASLEPGVKLQKNFKLANIVEAFQATAPKGQEAGKKSLQQGKGSKKGKTSVVPCEYCLDGSQPAVKTCLVCEASLCQAHLSKHNAKGFNQGHVLVEVGAGKAEERRCQDHGKLLECYCLREETCICMLCSIAGAHKGHEVITMKEARDQELVKLSNIMTELQESKNYLVTGLEELQKSENQIKTNTKTLTSQLEELFKKIKTELDKKKRVILRDLQYNEEADLAIIADKRKKMEQKRDQAEQNLQALQKRKEQPDIFLFFKDLKLVTDRIASLNLYPEHVYVEEVQLDQNYTMSQFERQKQSFMWQLDCLLRDVRVRTCQLNEEQQVSPFLYLPLVLLLTRYDLCFTGL
SIO_010081: LOC101812586
subclass of: SO_0000673
so part of: LOC101812586
location: complement(join(1079001..1079104,1079581..1079720,1080837..1080859,1080976..1081209,1081803..1081898,1083005..1083646))
location: region:1079001-1083646:-1
so has part: feature:1083005-1083646:-1:exon
so has part: feature:1081803-1081898:-1:exon
so has part: feature:1080976-1081209:-1:exon
so has part: feature:1080837-1080859:-1:exon
so has part: feature:1079581-1079720:-1:exon
so has part: feature:1079001-1079104:-1:exon

XP_016157191.1
type: Protein
SIO_000068: ncbiprotein

position:1079001:-1
position: 1079001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1083005-1083646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081803-1081898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1080976-1081209:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1080837-1080859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079581-1079720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1079001-1079104:-1:exon

LOC101812117
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1085205..1089917)
location: region:1085205-1089917:-1
so has part: feature:1085205-1089917:-1:exon
subclass of: SO_0000010

101812117
type: Gene
SIO_000068: ncbigene

position:1085205:-1
position: 1085205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089917:-1
position: 1089917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085205-1089917:-1:exon

LOC101812117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812117
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005053675.2
SIO_010081: LOC101812117
subclass of: SO_0000673
so part of: LOC101812117
location: complement(join(1085205..1085563,1086842..1087008,1087689..1087711,1087804..1088037,1088427..1088522,1089125..1089917))
location: region:1085205-1089917:-1
so has part: feature:1089125-1089917:-1:exon
so has part: feature:1088427-1088522:-1:exon
so has part: feature:1087804-1088037:-1:exon
so has part: feature:1087689-1087711:-1:exon
so has part: feature:1086842-1087008:-1:exon
so has part: feature:1085205-1085563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089125-1089917:-1:exon

position:1089125:-1
position: 1089125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1088427-1088522:-1:exon

position:1088427:-1
position: 1088427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088522:-1
position: 1088522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1087804-1088037:-1:exon

position:1087804:-1
position: 1087804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088037:-1
position: 1088037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1087689-1087711:-1:exon

position:1087689:-1
position: 1087689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087711:-1
position: 1087711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1086842-1087008:-1:exon

position:1086842:-1
position: 1086842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087008:-1
position: 1087008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1085205-1085563:-1:exon

position:1085563:-1
position: 1085563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101812117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812117
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053674.2
SIO_010081: LOC101812117
subclass of: SO_0000673
so part of: LOC101812117
location: complement(join(1085205..1085563,1086142..1086253,1086842..1087008,1087689..1087711,1087804..1088037,1088427..1088522,1089125..1089917))
location: region:1085205-1089917:-1
so has part: feature:1089125-1089917:-1:exon
so has part: feature:1088427-1088522:-1:exon
so has part: feature:1087804-1088037:-1:exon
so has part: feature:1087689-1087711:-1:exon
so has part: feature:1086842-1087008:-1:exon
so has part: feature:1086142-1086253:-1:exon
so has part: feature:1085205-1085563:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089125-1089917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088427-1088522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087804-1088037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087689-1087711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086842-1087008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086142-1086253:-1:exon

position:1086142:-1
position: 1086142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086253:-1
position: 1086253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1085205-1085563:-1:exon

LOC101812117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812117
product: E3 ubiquitin/ISG15 ligase TRIM25-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053673.2
SIO_010081: LOC101812117
subclass of: SO_0000673
so part of: LOC101812117
location: complement(join(1085205..1086253,1086842..1087008,1087689..1087711,1087804..1088037,1088427..1088522,1089125..1089917))
location: region:1085205-1089917:-1
so has part: feature:1089125-1089917:-1:exon
so has part: feature:1088427-1088522:-1:exon
so has part: feature:1087804-1088037:-1:exon
so has part: feature:1087689-1087711:-1:exon
so has part: feature:1086842-1087008:-1:exon
so has part: feature:1085205-1086253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1089125-1089917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088427-1088522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087804-1088037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087689-1087711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086842-1087008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085205-1086253:-1:exon

LOC101812117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X2
translation: MARAGAGAVPGLREELTCPICLDIYREPTSLGCSHSFCRDCIQQALRGQQSSARCPLCQSPVLERQPNFHLRNIVEKFMDAAERREEEAQEGQCEDTGEGSGKPEEAVLCDFCLQEPQPAVRTCLSCEASLCQAHLSKHNTSSAQRNHVLVEPCRGQALAERRCPKHGKMLECFCKTDKECICILCSVLSHQNHKIVGLEEAFKDAQISFPETLGALKHNEAVLDQAIANLVQQENKLKTEGSQRREQLESLFKEMHKQLEEKKQGVLKVLTDYENQQLSRIQTEMNNHKEKKDSASHDIQELQALRNEKDTLLFTKAFAAIDARKHEPVPRVHGVAVPNPPIILNKLTTDAVLVQFRQFLSTADASFKPPPAVTFKPTTSEEYWW
SIO_010081: LOC101812117
subclass of: SO_0000673
so part of: LOC101812117
location: complement(join(1085544..1085563,1086842..1087008,1087689..1087711,1087804..1088037,1088427..1088522,1089125..1089745))
location: region:1085544-1089745:-1
so has part: feature:1089125-1089745:-1:exon
so has part: feature:1088427-1088522:-1:exon
so has part: feature:1087804-1088037:-1:exon
so has part: feature:1087689-1087711:-1:exon
so has part: feature:1086842-1087008:-1:exon
so has part: feature:1085544-1085563:-1:exon

XP_005053732.1
type: Protein
SIO_000068: ncbiprotein

position:1085544:-1
position: 1085544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089745:-1
position: 1089745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089125-1089745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088427-1088522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087804-1088037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087689-1087711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086842-1087008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1085544-1085563:-1:exon

LOC101812117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
translation: MARAGAGAVPGLREELTCPICLDIYREPTSLGCSHSFCRDCIQQALRGQQSSARCPLCQSPVLERQPNFHLRNIVEKFMDAAERREEEAQEGQCEDTGEGSGKPEEAVLCDFCLQEPQPAVRTCLSCEASLCQAHLSKHNTSSAQRNHVLVEPCRGQALAERRCPKHGKMLECFCKTDKECICILCSVLSHQNHKIVGLEEAFKDAQISFPETLGALKHNEAVLDQAIANLVQQENKLKTEGSQRREQLESLFKEMHKQLEEKKQGVLKVLTDYENQQLSRIQTEMNNHKEKKDSASHDIQELQALRNEKDTLLFTKAFAAIDARKHEPVPRVHGVAVPNPPIILNKLTTDAVLVQFRQFLSTADASFKPPPAVTFKPTTSSFSFGGGRTQHGFMFGHDPSFSSS
SIO_010081: LOC101812117
subclass of: SO_0000673
so part of: LOC101812117
location: complement(join(1086177..1086253,1086842..1087008,1087689..1087711,1087804..1088037,1088427..1088522,1089125..1089745))
location: region:1086177-1089745:-1
so has part: feature:1089125-1089745:-1:exon
so has part: feature:1088427-1088522:-1:exon
so has part: feature:1087804-1088037:-1:exon
so has part: feature:1087689-1087711:-1:exon
so has part: feature:1086842-1087008:-1:exon
so has part: feature:1086177-1086253:-1:exon

XP_005053730.1
type: Protein
SIO_000068: ncbiprotein

position:1086177:-1
position: 1086177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089125-1089745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088427-1088522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087804-1088037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087689-1087711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086842-1087008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086177-1086253:-1:exon

LOC101812117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
translation: MARAGAGAVPGLREELTCPICLDIYREPTSLGCSHSFCRDCIQQALRGQQSSARCPLCQSPVLERQPNFHLRNIVEKFMDAAERREEEAQEGQCEDTGEGSGKPEEAVLCDFCLQEPQPAVRTCLSCEASLCQAHLSKHNTSSAQRNHVLVEPCRGQALAERRCPKHGKMLECFCKTDKECICILCSVLSHQNHKIVGLEEAFKDAQISFPETLGALKHNEAVLDQAIANLVQQENKLKTEGSQRREQLESLFKEMHKQLEEKKQGVLKVLTDYENQQLSRIQTEMNNHKEKKDSASHDIQELQALRNEKDTLLFTKAFAAIDARKHEPVPRVHGVAVPNPPIILNKLTTDAVLVQFRQFLSTADASFKPPPAVTFKPTTSSFSFGGGRTQHGFMFGHDPSFSSS
SIO_010081: LOC101812117
subclass of: SO_0000673
so part of: LOC101812117
location: complement(join(1086177..1086253,1086842..1087008,1087689..1087711,1087804..1088037,1088427..1088522,1089125..1089745))
location: region:1086177-1089745:-1
so has part: feature:1089125-1089745:-1:exon
so has part: feature:1088427-1088522:-1:exon
so has part: feature:1087804-1088037:-1:exon
so has part: feature:1087689-1087711:-1:exon
so has part: feature:1086842-1087008:-1:exon
so has part: feature:1086177-1086253:-1:exon

XP_005053731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1089125-1089745:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088427-1088522:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1087804-1088037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087689-1087711:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086842-1087008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086177-1086253:-1:exon

PPARGC1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PPARGC1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1099696..1114118)
location: region:1099696-1114118:-1
so has part: feature:1099696-1114118:-1:exon
subclass of: SO_0000010

101811787
type: Gene
SIO_000068: ncbigene

position:1099696:-1
position: 1099696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114118:-1
position: 1114118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099696-1114118:-1:exon

PPARGC1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PPARGC1B
product: PPARG coactivator 1 beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005053671.1
SIO_010081: PPARGC1B
subclass of: SO_0000673
so part of: PPARGC1B
location: complement(join(1099696..1100195,1101686..1101840,1102101..1102222,1102952..1103027,1103492..1104245,1104652..1104716,1105056..1105092,1105533..1106571,1107533..1107643,1109397..1109456,1109570..1109722,1111828..1112001,1113655..1114118))
location: region:1099696-1114118:-1
so has part: feature:1113655-1114118:-1:exon
so has part: feature:1111828-1112001:-1:exon
so has part: feature:1109570-1109722:-1:exon
so has part: feature:1109397-1109456:-1:exon
so has part: feature:1107533-1107643:-1:exon
so has part: feature:1105533-1106571:-1:exon
so has part: feature:1105056-1105092:-1:exon
so has part: feature:1104652-1104716:-1:exon
so has part: feature:1103492-1104245:-1:exon
so has part: feature:1102952-1103027:-1:exon
so has part: feature:1102101-1102222:-1:exon
so has part: feature:1101686-1101840:-1:exon
so has part: feature:1099696-1100195:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1113655-1114118:-1:exon

position:1113655:-1
position: 1113655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1111828-1112001:-1:exon

position:1111828:-1
position: 1111828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112001:-1
position: 1112001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1109570-1109722:-1:exon

position:1109570:-1
position: 1109570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109722:-1
position: 1109722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1109397-1109456:-1:exon

position:1109397:-1
position: 1109397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109456:-1
position: 1109456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1107533-1107643:-1:exon

position:1107533:-1
position: 1107533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107643:-1
position: 1107643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1105533-1106571:-1:exon

position:1105533:-1
position: 1105533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106571:-1
position: 1106571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1105056-1105092:-1:exon

position:1105056:-1
position: 1105056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105092:-1
position: 1105092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1104652-1104716:-1:exon

position:1104652:-1
position: 1104652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104716:-1
position: 1104716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1103492-1104245:-1:exon

position:1103492:-1
position: 1103492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1104245:-1
position: 1104245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1102952-1103027:-1:exon

position:1102952:-1
position: 1102952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1103027:-1
position: 1103027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1102101-1102222:-1:exon

position:1102101:-1
position: 1102101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102222:-1
position: 1102222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1101686-1101840:-1:exon

position:1101686:-1
position: 1101686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101840:-1
position: 1101840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1099696-1100195:-1:exon

position:1100195:-1
position: 1100195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPARGC1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PPARGC1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome proliferator-activated receptor gamma coactivator 1-beta
translation: MYGLAKNKSLCLCSHGKIWGEGGDKVVTRLFLEQGQEGRDKPQQYEVSGEEHLYSDFPEIDLSQLDAGDLDSAGCFSELHWAGERSETDSSQYSTDDSELFQIIDSENEALLAALTETLDDIQGDDMGLAAFPTMEEGDTLNPATTSPAPSPKPTAPVSGGPPPAPECDELSLLKKLLLSPSPPSCEVQRDGSARRPGTPKSRPARPCTKVEGPRDRRASIPQAQSRSCTELHRHLTSSSSCSQTKAPQAPEECPGSGHHPSLGDCAQHEDDSDCSEDSLSSGDSVEDGPGSQFSCQGELHSVLELIRYMHTYCLPPRKLPAREPADSKPQPCCSPFKRAKADCAPAPGAAQSRPGSCKKPGASFSILKELLARDLLCDVSKPYRLGKPVYAALARPPGSCSPVPEGEDASGTCTSRVRAAAAEKGEPRQSPEAEVPGELGGPEDDAGRQEGTLGTAKVARKQDSAVHAVRRSKRLNPEFGHWLSFLEPPTECSVPLGCREAQCPVLEGFSAEEPAAEVEVGGTAPPAEPQPLCLGSLGDGELGTESQRCALLEQTETPRCLTLSLAQTDPTFGKRNFEPMLTVELCGTAGLTPPTTPPYKPAEEDLYKPDIPQEPGKEEGITPGPGGTGDVAASRKAPRKHPERTELLAHLSRPLPEQQGLLKRPFSRSFGDHDYCQVLKPEAALQRKVLKSWEPPSQVETEHKRRVPAAHYQGLELGKDTGTEMLWKDGVKQLRDQEIRASLTKHFGFLDSALDDEDMVFCKTPEYDTVFEDSCSESGSPGEEEEEEEEEEEEEEHGNTKLCLRRNPLSRTSLHYCSRSRSSSGSSCCRSRSPASRRTFRCENGEQCQLGSGHRGQLKKRREKAIGEGRVVYIRNLSSSMSSSELKKRFEVFGEIVECQVLSRTNRGEKYGFITYRYSEHAALSLRNGPSLRKRNEPSFQLSSGGLGRFFWTRYADLDCSTDESSPAPVKSKFETMDFDSLLQEAQLSLHR
SIO_010081: PPARGC1B
subclass of: SO_0000673
so part of: PPARGC1B
location: complement(join(1100092..1100195,1101686..1101840,1102101..1102222,1102952..1103027,1103492..1104245,1104652..1104716,1105056..1105092,1105533..1106571,1107533..1107643,1109397..1109456,1109570..1109722,1111828..1112001,1113655..1113786))
location: region:1100092-1113786:-1
so has part: feature:1113655-1113786:-1:exon
so has part: feature:1111828-1112001:-1:exon
so has part: feature:1109570-1109722:-1:exon
so has part: feature:1109397-1109456:-1:exon
so has part: feature:1107533-1107643:-1:exon
so has part: feature:1105533-1106571:-1:exon
so has part: feature:1105056-1105092:-1:exon
so has part: feature:1104652-1104716:-1:exon
so has part: feature:1103492-1104245:-1:exon
so has part: feature:1102952-1103027:-1:exon
so has part: feature:1102101-1102222:-1:exon
so has part: feature:1101686-1101840:-1:exon
so has part: feature:1100092-1100195:-1:exon

XP_005053728.1
type: Protein
SIO_000068: ncbiprotein

position:1100092:-1
position: 1100092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113786:-1
position: 1113786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113655-1113786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1111828-1112001:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1109570-1109722:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1109397-1109456:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1107533-1107643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1105533-1106571:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1105056-1105092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1104652-1104716:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1103492-1104245:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1102952-1103027:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1102101-1102222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1101686-1101840:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1100092-1100195:-1:exon

ARHGEF37
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ARHGEF37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1164613..1177215)
location: region:1164613-1177215:-1
so has part: feature:1164613-1177215:-1:exon
subclass of: SO_0000010

101811598
type: Gene
SIO_000068: ncbigene

position:1164613:-1
position: 1164613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177215:-1
position: 1177215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1164613-1177215:-1:exon

ARHGEF37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ARHGEF37
product: Rho guanine nucleotide exchange factor 37
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005053670.2
SIO_010081: ARHGEF37
subclass of: SO_0000673
so part of: ARHGEF37
location: complement(join(1164613..1164838,1165119..1165291,1165677..1165872,1166229..1166357,1166996..1167325,1167905..1168015,1168607..1168711,1169250..1169380,1175033..1175232,1175951..1176098,1176368..1176491,1176833..1177215))
location: region:1164613-1177215:-1
so has part: feature:1176833-1177215:-1:exon
so has part: feature:1176368-1176491:-1:exon
so has part: feature:1175951-1176098:-1:exon
so has part: feature:1175033-1175232:-1:exon
so has part: feature:1169250-1169380:-1:exon
so has part: feature:1168607-1168711:-1:exon
so has part: feature:1167905-1168015:-1:exon
so has part: feature:1166996-1167325:-1:exon
so has part: feature:1166229-1166357:-1:exon
so has part: feature:1165677-1165872:-1:exon
so has part: feature:1165119-1165291:-1:exon
so has part: feature:1164613-1164838:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1176833-1177215:-1:exon

position:1176833:-1
position: 1176833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176368-1176491:-1:exon

position:1176368:-1
position: 1176368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176491:-1
position: 1176491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175951-1176098:-1:exon

position:1175951:-1
position: 1175951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176098:-1
position: 1176098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175033-1175232:-1:exon

position:1175033:-1
position: 1175033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175232:-1
position: 1175232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1169250-1169380:-1:exon

position:1169250:-1
position: 1169250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169380:-1
position: 1169380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1168607-1168711:-1:exon

position:1168607:-1
position: 1168607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168711:-1
position: 1168711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1167905-1168015:-1:exon

position:1167905:-1
position: 1167905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168015:-1
position: 1168015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1166996-1167325:-1:exon

position:1166996:-1
position: 1166996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167325:-1
position: 1167325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1166229-1166357:-1:exon

position:1166229:-1
position: 1166229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166357:-1
position: 1166357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1165677-1165872:-1:exon

position:1165677:-1
position: 1165677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165872:-1
position: 1165872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1165119-1165291:-1:exon

position:1165119:-1
position: 1165119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165291:-1
position: 1165291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1164613-1164838:-1:exon

position:1164838:-1
position: 1164838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ARHGEF37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 37
translation: MVLEPACKCRWVERPWGCAVGSPRRRMGSWAGQQSSSARAACGPLQCPAAMASAEPDPEDAAGAGGAVPCDRTELSQRLAVEELVTTEASYVHNMQLCVSDIRAHLQEKQLPELDLEGLFSNTDDILHVSRRFLKGLEATAGQGQEQLLCISTLFQEFKEEMETVYKIYCASYDHALQLVESYRRDPRLQEEILDTLNATVPHTGASDLSFFLVMPVQRVTKYPLLLGKILENTPSSASAHSALQAAARAMAQVNANINEYKRRREVATKYNKAEHLTLRDRLARLNTHSIAKKTTRLSRLLMHEAGIVAKTEDKEYDDLEEKFQCVASSVATLKENVASYLGHLQAFLLPTPHQWDLQMDEGPAQQHRRLSELLHSSVFPEFKQRVDRLGWQPLCSLSDTLEGPQQLVKKRLDKLLDYEEIQERKSEMGSVSYDEEAAMNTYLAINDLLLAELPRFNQLALQLLGQILRSFSALQLDLAAQALQQAEKELEQLPHGHMPLPSFWKVVEDTLQQSGAQLRAFCQAFETVTPSPGTQPLTPAEERKVLSLVSKHGPDKLYQVTSNISGSRDLDLTLLRGQIVALLQSSDTKGNTSRWLVDAGGPRGFVPAAKLRPYSPVQAQQPGMQLLSLDSGTESRRHSYASPEAPRPQVATFTPTFQVVAGFSFAARSPQEVTLQAGQPVLLLEPHDKKGSPEWSLVEVNGQRGYVPSSYLVTVPVQDPAGWSLPV
SIO_010081: ARHGEF37
subclass of: SO_0000673
so part of: ARHGEF37
location: complement(join(1164629..1164838,1165119..1165291,1165677..1165872,1166229..1166357,1166996..1167325,1167905..1168015,1168607..1168711,1169250..1169380,1175033..1175232,1175951..1176098,1176368..1176491,1176833..1177162))
location: region:1164629-1177162:-1
so has part: feature:1176833-1177162:-1:exon
so has part: feature:1176368-1176491:-1:exon
so has part: feature:1175951-1176098:-1:exon
so has part: feature:1175033-1175232:-1:exon
so has part: feature:1169250-1169380:-1:exon
so has part: feature:1168607-1168711:-1:exon
so has part: feature:1167905-1168015:-1:exon
so has part: feature:1166996-1167325:-1:exon
so has part: feature:1166229-1166357:-1:exon
so has part: feature:1165677-1165872:-1:exon
so has part: feature:1165119-1165291:-1:exon
so has part: feature:1164629-1164838:-1:exon

XP_005053727.1
type: Protein
SIO_000068: ncbiprotein

position:1164629:-1
position: 1164629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177162:-1
position: 1177162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176833-1177162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1176368-1176491:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175951-1176098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175033-1175232:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1169250-1169380:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1168607-1168711:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1167905-1168015:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1166996-1167325:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1166229-1166357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1165677-1165872:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1165119-1165291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1164629-1164838:-1:exon

LOC101811400
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101811400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1171164..1174436
location: region:1171164-1174436:1
so has part: feature:1171164-1174436:1:exon
subclass of: SO_0000010

101811400
type: Gene
SIO_000068: ncbigene

position:1171164:1
position: 1171164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174436:1
position: 1174436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171164-1174436:1:exon

LOC101811400
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811400
product: tuftelin-interacting protein 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301685.1
SIO_010081: LOC101811400
subclass of: SO_0000673
so part of: LOC101811400
location: join(1171164..1172034,1172114..1174436)
location: region:1171164-1174436:1
so has part: feature:1171164-1172034:1:exon
so has part: feature:1172114-1174436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1171164-1172034:1:exon

position:1172034:1
position: 1172034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1172114-1174436:1:exon

position:1172114:1
position: 1172114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101811400
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811400
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:1173275..1173277,aa:OTHER)
product: LOW QUALITY PROTEIN: tuftelin-interacting protein 11-like
translation: MSTPHLYGTDGGAGVEMESFEVSDWELQNEFDPQRHLQTKEEATYGVRDERHSDEGSDGDERPVKQEEIPKQSVPKKLKTGGNVKPSQKGFTGGSKSFVGFGSWERHTKGIGRKLLQKMGYVPGRGLGKDAQGIISPIEAKQRKGKGAVGAYGSERTTQSLQNFPGVDSEEETEEEFQEELGQWQKDPNGGKKKPKYSYKTVEELKAKGRISKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDSKPQGFALPELEHNLQQLIDITEQEVIQSDRQLQYERDMVVNLSHEMQKVAEVLSHEEKEISNLSKVLAMVEECERQMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFKNWDPFKDCTHGTEIIAKWKSLLENDQLLPHSGQDLPTDAFPRLMWEIWMPHVRNMVARWQPRNCGSVVGFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWDPLTDTVPIHSWIHPWLPLMRARLEPLYSPIRTKLANALHKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLNELIINPHQQHMDAFHWVIDWEGMISVSSLAGLLEKHFFPKWLQVLCSWLSNSPNYEEIAKWYLGRKSMFSDQVLAHPCIKDKFNEALDIMKRAVSXSVGARGNIAHLTSGAAQRGAAAGPAPLSFRDLVLTEAEEHNIVLAPVIGKRHEGQQLYTFGRIVIYIHRGVVFVQGEKTWVPTSLQSLIDMAR
SIO_010081: LOC101811400
subclass of: SO_0000673
so part of: LOC101811400
location: join(1171189..1172034,1172114..1173559)
location: region:1171189-1173559:1
so has part: feature:1171189-1172034:1:exon
so has part: feature:1172114-1173559:1:exon

XP_016157171.1
type: Protein
SIO_000068: ncbiprotein

position:1171189:1
position: 1171189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173559:1
position: 1173559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171189-1172034:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172114-1173559:1:exon

CSNK1A1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CSNK1A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1196187..1227249
location: region:1196187-1227249:1
so has part: feature:1196187-1227249:1:exon
subclass of: SO_0000010

101810953
type: Gene
SIO_000068: ncbigene

position:1196187:1
position: 1196187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227249:1
position: 1227249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196187-1227249:1:exon

CSNK1A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CSNK1A1
product: casein kinase 1 alpha 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005053667.1
SIO_010081: CSNK1A1
subclass of: SO_0000673
so part of: CSNK1A1
location: join(1196187..1196346,1197170..1197276,1207766..1207892,1209668..1209766,1212181..1212264,1215049..1215188,1218235..1218313,1219787..1219861,1221085..1221191,1222009..1222157,1227114..1227249)
location: region:1196187-1227249:1
so has part: feature:1196187-1196346:1:exon
so has part: feature:1197170-1197276:1:exon
so has part: feature:1207766-1207892:1:exon
so has part: feature:1209668-1209766:1:exon
so has part: feature:1212181-1212264:1:exon
so has part: feature:1215049-1215188:1:exon
so has part: feature:1218235-1218313:1:exon
so has part: feature:1219787-1219861:1:exon
so has part: feature:1221085-1221191:1:exon
so has part: feature:1222009-1222157:1:exon
so has part: feature:1227114-1227249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1196187-1196346:1:exon

position:1196346:1
position: 1196346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1197170-1197276:1:exon

position:1197170:1
position: 1197170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197276:1
position: 1197276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1207766-1207892:1:exon

position:1207766:1
position: 1207766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1207892:1
position: 1207892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1209668-1209766:1:exon

position:1209668:1
position: 1209668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1209766:1
position: 1209766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1212181-1212264:1:exon

position:1212181:1
position: 1212181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1212264:1
position: 1212264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1215049-1215188:1:exon

position:1215049:1
position: 1215049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1215188:1
position: 1215188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1218235-1218313:1:exon

position:1218235:1
position: 1218235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1218313:1
position: 1218313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1219787-1219861:1:exon

position:1219787:1
position: 1219787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1219861:1
position: 1219861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1221085-1221191:1:exon

position:1221085:1
position: 1221085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1221191:1
position: 1221191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1222009-1222157:1:exon

position:1222009:1
position: 1222009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222157:1
position: 1222157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1227114-1227249:1:exon

position:1227114:1
position: 1227114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSNK1A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CSNK1A1
product: casein kinase 1 alpha 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_016301616.1
SIO_010081: CSNK1A1
subclass of: SO_0000673
so part of: CSNK1A1
location: join(1196187..1196346,1197170..1197276,1207766..1207892,1209668..1209766,1212181..1212264,1215049..1215188,1218235..1218313,1219787..1219861,1221085..1221191,1222009..1222121,1227114..1227249)
location: region:1196187-1227249:1
so has part: feature:1196187-1196346:1:exon
so has part: feature:1197170-1197276:1:exon
so has part: feature:1207766-1207892:1:exon
so has part: feature:1209668-1209766:1:exon
so has part: feature:1212181-1212264:1:exon
so has part: feature:1215049-1215188:1:exon
so has part: feature:1218235-1218313:1:exon
so has part: feature:1219787-1219861:1:exon
so has part: feature:1221085-1221191:1:exon
so has part: feature:1222009-1222121:1:exon
so has part: feature:1227114-1227249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1196187-1196346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197170-1197276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1207766-1207892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209668-1209766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212181-1212264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215049-1215188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1218235-1218313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1219787-1219861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1221085-1221191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1222009-1222121:1:exon

position:1222121:1
position: 1222121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1227114-1227249:1:exon

CSNK1A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CSNK1A1
product: casein kinase 1 alpha 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005053669.1
SIO_010081: CSNK1A1
subclass of: SO_0000673
so part of: CSNK1A1
location: join(1196187..1196346,1197170..1197276,1207766..1207892,1209668..1209766,1215049..1215188,1218235..1218313,1219787..1219861,1221085..1221191,1222009..1222157,1227114..1227249)
location: region:1196187-1227249:1
so has part: feature:1196187-1196346:1:exon
so has part: feature:1197170-1197276:1:exon
so has part: feature:1207766-1207892:1:exon
so has part: feature:1209668-1209766:1:exon
so has part: feature:1215049-1215188:1:exon
so has part: feature:1218235-1218313:1:exon
so has part: feature:1219787-1219861:1:exon
so has part: feature:1221085-1221191:1:exon
so has part: feature:1222009-1222157:1:exon
so has part: feature:1227114-1227249:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1196187-1196346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197170-1197276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1207766-1207892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209668-1209766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1215049-1215188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218235-1218313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1219787-1219861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221085-1221191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1222009-1222157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1227114-1227249:1:exon

CSNK1A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CSNK1A1
product: casein kinase 1 alpha 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005053668.2
SIO_010081: CSNK1A1
subclass of: SO_0000673
so part of: CSNK1A1
location: join(1196187..1196346,1197170..1197276,1207766..1207892,1209668..1209766,1212181..1212264,1215049..1215188,1218235..1218313,1219787..1219861,1221085..1221191,1222009..1222162)
location: region:1196187-1222162:1
so has part: feature:1196187-1196346:1:exon
so has part: feature:1197170-1197276:1:exon
so has part: feature:1207766-1207892:1:exon
so has part: feature:1209668-1209766:1:exon
so has part: feature:1212181-1212264:1:exon
so has part: feature:1215049-1215188:1:exon
so has part: feature:1218235-1218313:1:exon
so has part: feature:1219787-1219861:1:exon
so has part: feature:1221085-1221191:1:exon
so has part: feature:1222009-1222162:1:exon

position:1222162:1
position: 1222162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196187-1196346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197170-1197276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1207766-1207892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209668-1209766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212181-1212264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215049-1215188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1218235-1218313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1219787-1219861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1221085-1221191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1222009-1222162:1:exon

CSNK1A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CSNK1A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X1
translation: MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTGKQTDKSKSNMKGF
SIO_010081: CSNK1A1
subclass of: SO_0000673
so part of: CSNK1A1
location: join(1196224..1196346,1197170..1197276,1207766..1207892,1209668..1209766,1212181..1212264,1215049..1215188,1218235..1218313,1219787..1219861,1221085..1221191,1222009..1222157,1227114..1227121)
location: region:1196224-1227121:1
so has part: feature:1196224-1196346:1:exon
so has part: feature:1197170-1197276:1:exon
so has part: feature:1207766-1207892:1:exon
so has part: feature:1209668-1209766:1:exon
so has part: feature:1212181-1212264:1:exon
so has part: feature:1215049-1215188:1:exon
so has part: feature:1218235-1218313:1:exon
so has part: feature:1219787-1219861:1:exon
so has part: feature:1221085-1221191:1:exon
so has part: feature:1222009-1222157:1:exon
so has part: feature:1227114-1227121:1:exon

XP_005053724.1
type: Protein
SIO_000068: ncbiprotein

position:1196224:1
position: 1196224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227121:1
position: 1227121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196224-1196346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197170-1197276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1207766-1207892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209668-1209766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212181-1212264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215049-1215188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1218235-1218313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1219787-1219861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1221085-1221191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1222009-1222157:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1227114-1227121:1:exon

CSNK1A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CSNK1A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X3
translation: MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTGF
SIO_010081: CSNK1A1
subclass of: SO_0000673
so part of: CSNK1A1
location: join(1196224..1196346,1197170..1197276,1207766..1207892,1209668..1209766,1212181..1212264,1215049..1215188,1218235..1218313,1219787..1219861,1221085..1221191,1222009..1222121,1227114..1227121)
location: region:1196224-1227121:1
so has part: feature:1196224-1196346:1:exon
so has part: feature:1197170-1197276:1:exon
so has part: feature:1207766-1207892:1:exon
so has part: feature:1209668-1209766:1:exon
so has part: feature:1212181-1212264:1:exon
so has part: feature:1215049-1215188:1:exon
so has part: feature:1218235-1218313:1:exon
so has part: feature:1219787-1219861:1:exon
so has part: feature:1221085-1221191:1:exon
so has part: feature:1222009-1222121:1:exon
so has part: feature:1227114-1227121:1:exon

XP_016157102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1196224-1196346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197170-1197276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1207766-1207892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209668-1209766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212181-1212264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215049-1215188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1218235-1218313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1219787-1219861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1221085-1221191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1222009-1222121:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1227114-1227121:1:exon

CSNK1A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CSNK1A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X4
translation: MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTGKQTDKSKSNMKGF
SIO_010081: CSNK1A1
subclass of: SO_0000673
so part of: CSNK1A1
location: join(1196224..1196346,1197170..1197276,1207766..1207892,1209668..1209766,1215049..1215188,1218235..1218313,1219787..1219861,1221085..1221191,1222009..1222157,1227114..1227121)
location: region:1196224-1227121:1
so has part: feature:1196224-1196346:1:exon
so has part: feature:1197170-1197276:1:exon
so has part: feature:1207766-1207892:1:exon
so has part: feature:1209668-1209766:1:exon
so has part: feature:1215049-1215188:1:exon
so has part: feature:1218235-1218313:1:exon
so has part: feature:1219787-1219861:1:exon
so has part: feature:1221085-1221191:1:exon
so has part: feature:1222009-1222157:1:exon
so has part: feature:1227114-1227121:1:exon

XP_005053726.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1196224-1196346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197170-1197276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1207766-1207892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209668-1209766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1215049-1215188:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1218235-1218313:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1219787-1219861:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1221085-1221191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1222009-1222157:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1227114-1227121:1:exon

CSNK1A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CSNK1A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X2
translation: MASSSGSKAEFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKCLESPVGKRKRSMTVSTSQDPSFSGLNQLFLIDFGLAKKYRDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAASSSGQGQQAQTPTGKQTDKSKSNMKG
SIO_010081: CSNK1A1
subclass of: SO_0000673
so part of: CSNK1A1
location: join(1196224..1196346,1197170..1197276,1207766..1207892,1209668..1209766,1212181..1212264,1215049..1215188,1218235..1218313,1219787..1219861,1221085..1221191,1222009..1222162)
location: region:1196224-1222162:1
so has part: feature:1196224-1196346:1:exon
so has part: feature:1197170-1197276:1:exon
so has part: feature:1207766-1207892:1:exon
so has part: feature:1209668-1209766:1:exon
so has part: feature:1212181-1212264:1:exon
so has part: feature:1215049-1215188:1:exon
so has part: feature:1218235-1218313:1:exon
so has part: feature:1219787-1219861:1:exon
so has part: feature:1221085-1221191:1:exon
so has part: feature:1222009-1222162:1:exon

XP_005053725.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1196224-1196346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1197170-1197276:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1207766-1207892:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1209668-1209766:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1212181-1212264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1215049-1215188:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1218235-1218313:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1219787-1219861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1221085-1221191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1222009-1222162:1:exon

IL17B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: IL17B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1265347..1268211
location: region:1265347-1268211:1
so has part: feature:1265347-1268211:1:exon
subclass of: SO_0000010

101810756
type: Gene
SIO_000068: ncbigene

position:1265347:1
position: 1265347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268211:1
position: 1268211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265347-1268211:1:exon

IL17B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IL17B
product: interleukin 17B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005053666.1
SIO_010081: IL17B
subclass of: SO_0000673
so part of: IL17B
location: join(1265347..1265906,1266722..1267008,1267672..1268211)
location: region:1265347-1268211:1
so has part: feature:1265347-1265906:1:exon
so has part: feature:1266722-1267008:1:exon
so has part: feature:1267672-1268211:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1265347-1265906:1:exon

position:1265906:1
position: 1265906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1266722-1267008:1:exon

position:1266722:1
position: 1266722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267008:1
position: 1267008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1267672-1268211:1:exon

position:1267672:1
position: 1267672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL17B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IL17B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17B
translation: MERAPNLLLLCIFTFAMVLVPEAKDQSRAAKGRRRGLARAPTAPPALAWAPDEPYSSMAEYEHSIQDMVRQLRNGSEPGDTKCQLNLRLWRSNRRSLSPWAYRINHDSTRIPADIPEARCLCTGCINPFTMQEDRSMASIPIYSRLPVRRRLCPGPHSPSGNKCHKKYQMVMETIAVGCTCIF
SIO_010081: IL17B
subclass of: SO_0000673
so part of: IL17B
location: join(1265886..1265906,1266722..1267008,1267672..1267915)
location: region:1265886-1267915:1
so has part: feature:1265886-1265906:1:exon
so has part: feature:1266722-1267008:1:exon
so has part: feature:1267672-1267915:1:exon

XP_005053723.1
type: Protein
SIO_000068: ncbiprotein

position:1265886:1
position: 1265886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267915:1
position: 1267915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265886-1265906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1266722-1267008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267672-1267915:1:exon

PCYOX1L
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PCYOX1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1268787..1271716)
location: region:1268787-1271716:-1
so has part: feature:1268787-1271716:-1:exon
subclass of: SO_0000010

101811469
type: Gene
SIO_000068: ncbigene

position:1268787:-1
position: 1268787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271716:-1
position: 1271716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268787-1271716:-1:exon

PCYOX1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PCYOX1L
product: prenylcysteine oxidase 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301519.1
SIO_010081: PCYOX1L
subclass of: SO_0000673
so part of: PCYOX1L
location: complement(join(1268787..1269330,1269388..1269746,1270442..1270582,1270671..1270882,1270963..1271137,1271518..1271716))
location: region:1268787-1271716:-1
so has part: feature:1271518-1271716:-1:exon
so has part: feature:1270963-1271137:-1:exon
so has part: feature:1270671-1270882:-1:exon
so has part: feature:1270442-1270582:-1:exon
so has part: feature:1269388-1269746:-1:exon
so has part: feature:1268787-1269330:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1271518-1271716:-1:exon

position:1271518:-1
position: 1271518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1270963-1271137:-1:exon

position:1270963:-1
position: 1270963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271137:-1
position: 1271137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1270671-1270882:-1:exon

position:1270671:-1
position: 1270671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270882:-1
position: 1270882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1270442-1270582:-1:exon

position:1270442:-1
position: 1270442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1270582:-1
position: 1270582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1269388-1269746:-1:exon

position:1269388:-1
position: 1269388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1269746:-1
position: 1269746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1268787-1269330:-1:exon

position:1269330:-1
position: 1269330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCYOX1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PCYOX1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prenylcysteine oxidase-like
translation: MQDFVKILGLKHRREVAGKSAIFSGEHFVLEETDWYLLNLFRLWWHYGISFLRLQMWVEEVMEKFMRIYKYQAHGYAFSSLEELLRSLGGEAFVNMTQRSVAESLLEVGVTQRFVDDVIAAVLRSSYGQSVLVPAFAGAMSLAGAQGSTWAVEGGNKLVCSGLLKLTKANVISARVTGISLHSSEGRALYQVHYESTEGQGSAFYDMVVVTTPLHPSRSNFTFENFDPPIADFPGAFHPSVTSVVHGYLNSSYFGFPDPKLFPFTSILTTDTPDLFFHAVDNICPVNVSAAFRRKQPQEAAVWRGRVLSRQPLDKQQLKTLFRSYYSVQVAEWQTYPRYDAARALPPVVLHENLFYLSAVEWVASSMEMVAVAAKNVALLAYNRWHQELEKIDQKDLMHKVKTEL
SIO_010081: PCYOX1L
subclass of: SO_0000673
so part of: PCYOX1L
location: complement(join(1269025..1269330,1269388..1269746,1270442..1270582,1270671..1270882,1270963..1271137,1271518..1271542))
location: region:1269025-1271542:-1
so has part: feature:1271518-1271542:-1:exon
so has part: feature:1270963-1271137:-1:exon
so has part: feature:1270671-1270882:-1:exon
so has part: feature:1270442-1270582:-1:exon
so has part: feature:1269388-1269746:-1:exon
so has part: feature:1269025-1269330:-1:exon

XP_016157005.1
type: Protein
SIO_000068: ncbiprotein

position:1269025:-1
position: 1269025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1271542:-1
position: 1271542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1271518-1271542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1270963-1271137:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1270671-1270882:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1270442-1270582:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1269388-1269746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1269025-1269330:-1:exon

GRPEL2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GRPEL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1275653..1288924)
location: region:1275653-1288924:-1
so has part: feature:1275653-1288924:-1:exon
subclass of: SO_0000010

101810374
type: Gene
SIO_000068: ncbigene

position:1275653:-1
position: 1275653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288924:-1
position: 1288924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1275653-1288924:-1:exon

GRPEL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GRPEL2
product: GrpE like 2, mitochondrial, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005053665.2
SIO_010081: GRPEL2
subclass of: SO_0000673
so part of: GRPEL2
location: complement(join(1275653..1278326,1280213..1280294,1281353..1281521,1288781..1288924))
location: region:1275653-1288924:-1
so has part: feature:1288781-1288924:-1:exon
so has part: feature:1281353-1281521:-1:exon
so has part: feature:1280213-1280294:-1:exon
so has part: feature:1275653-1278326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288781-1288924:-1:exon

position:1288781:-1
position: 1288781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281353-1281521:-1:exon

position:1281353:-1
position: 1281353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1281521:-1
position: 1281521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1280213-1280294:-1:exon

position:1280213:-1
position: 1280213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1280294:-1
position: 1280294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1275653-1278326:-1:exon

position:1278326:-1
position: 1278326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRPEL2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: GRPEL2
product: GrpE like 2, mitochondrial, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_219097.2
SIO_010081: GRPEL2
so part of: GRPEL2
location: complement(join(1275653..1276496,1276988..1278326,1280213..1280294,1281353..1281521,1285130..1285273))
location: region:1275653-1285273:-1
so has part: feature:1285130-1285273:-1:exon
so has part: feature:1281353-1281521:-1:exon
so has part: feature:1280213-1280294:-1:exon
so has part: feature:1276988-1278326:-1:exon
so has part: feature:1275653-1276496:-1:exon

position:1285273:-1
position: 1285273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285130-1285273:-1:exon

position:1285130:-1
position: 1285130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281353-1281521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280213-1280294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1276988-1278326:-1:exon

position:1276988:-1
position: 1276988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1275653-1276496:-1:exon

position:1276496:-1
position: 1276496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRPEL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GRPEL2
product: GrpE like 2, mitochondrial, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005053664.2
SIO_010081: GRPEL2
subclass of: SO_0000673
so part of: GRPEL2
location: complement(join(1275653..1278326,1280213..1280294,1281353..1281521,1285130..1285273))
location: region:1275653-1285273:-1
so has part: feature:1285130-1285273:-1:exon
so has part: feature:1281353-1281521:-1:exon
so has part: feature:1280213-1280294:-1:exon
so has part: feature:1275653-1278326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285130-1285273:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281353-1281521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280213-1280294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275653-1278326:-1:exon

GRPEL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GRPEL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: grpE protein homolog 2, mitochondrial isoform X2
translation: MAARSLRRLRALLPEAGKAGTGSLYFRGSPCAFSTAAQQRSTGDECGPEEPSEEPKHPLSDCALEHKAIKLEEQVRDLTERYRKALADSENVRRRTQKFVEDAKLFGIQSFCRDLVEVADILEKTAESAAGQAEPSDPNPTLKKIYEGLSLIEAKLQSVFAKHGLQKMNPVGGRYDPYEHEIICHVPAEGMQPGTVALVTQDGYKLHGRTIRHALVGVAVEAHQ
SIO_010081: GRPEL2
subclass of: SO_0000673
so part of: GRPEL2
location: complement(join(1277971..1278326,1280213..1280294,1281353..1281521,1288781..1288848))
location: region:1277971-1288848:-1
so has part: feature:1288781-1288848:-1:exon
so has part: feature:1281353-1281521:-1:exon
so has part: feature:1280213-1280294:-1:exon
so has part: feature:1277971-1278326:-1:exon

XP_005053722.1
type: Protein
SIO_000068: ncbiprotein

position:1277971:-1
position: 1277971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1288848:-1
position: 1288848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288781-1288848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281353-1281521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280213-1280294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277971-1278326:-1:exon

GRPEL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GRPEL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: grpE protein homolog 2, mitochondrial isoform X1
translation: MAARSLRRLRALLPEAGKAGTGSLYFRGSPCAFSTAAQQRSTGDECGPEEPSEEPKHPLSDCALEHKAIKLEEQVRDLTERYRKALADSENVRRRTQKFVEDAKLFGIQSFCRDLVEVADILEKTAESAAGQAEPSDPNPTLKKIYEGLSLIEAKLQSVFAKHGLQKMNPVGGRYDPYEHEIICHVPAEGMQPGTVALVTQDGYKLHGRTIRHALVGVAVEAHQ
SIO_010081: GRPEL2
subclass of: SO_0000673
so part of: GRPEL2
location: complement(join(1277971..1278326,1280213..1280294,1281353..1281521,1285130..1285197))
location: region:1277971-1285197:-1
so has part: feature:1285130-1285197:-1:exon
so has part: feature:1281353-1281521:-1:exon
so has part: feature:1280213-1280294:-1:exon
so has part: feature:1277971-1278326:-1:exon

XP_005053721.1
type: Protein
SIO_000068: ncbiprotein

position:1285197:-1
position: 1285197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285130-1285197:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1281353-1281521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1280213-1280294:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277971-1278326:-1:exon

AFAP1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: AFAP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1290199..1315128)
location: region:1290199-1315128:-1
so has part: feature:1290199-1315128:-1:exon
subclass of: SO_0000010

101810066
type: Gene
SIO_000068: ncbigene

position:1290199:-1
position: 1290199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315128:-1
position: 1315128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290199-1315128:-1:exon

AFAP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AFAP1L1
product: actin filament associated protein 1 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005053662.2
SIO_010081: AFAP1L1
subclass of: SO_0000673
so part of: AFAP1L1
location: complement(join(1290199..1291306,1291550..1291678,1291915..1292093,1295459..1295623,1295777..1295891,1296002..1296080,1296351..1296496,1296693..1296904,1297250..1297402,1297536..1297629,1297830..1297916,1298547..1298726,1299052..1299263,1299619..1299717,1301858..1301969,1302085..1302182,1302490..1302573,1303002..1303130,1315076..1315128))
location: region:1290199-1315128:-1
so has part: feature:1315076-1315128:-1:exon
so has part: feature:1303002-1303130:-1:exon
so has part: feature:1302490-1302573:-1:exon
so has part: feature:1302085-1302182:-1:exon
so has part: feature:1301858-1301969:-1:exon
so has part: feature:1299619-1299717:-1:exon
so has part: feature:1299052-1299263:-1:exon
so has part: feature:1298547-1298726:-1:exon
so has part: feature:1297830-1297916:-1:exon
so has part: feature:1297536-1297629:-1:exon
so has part: feature:1297250-1297402:-1:exon
so has part: feature:1296693-1296904:-1:exon
so has part: feature:1296351-1296496:-1:exon
so has part: feature:1296002-1296080:-1:exon
so has part: feature:1295777-1295891:-1:exon
so has part: feature:1295459-1295623:-1:exon
so has part: feature:1291915-1292093:-1:exon
so has part: feature:1291550-1291678:-1:exon
so has part: feature:1290199-1291306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1315076-1315128:-1:exon

position:1315076:-1
position: 1315076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1303002-1303130:-1:exon

position:1303002:-1
position: 1303002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1303130:-1
position: 1303130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1302490-1302573:-1:exon

position:1302490:-1
position: 1302490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302573:-1
position: 1302573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1302085-1302182:-1:exon

position:1302085:-1
position: 1302085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1302182:-1
position: 1302182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1301858-1301969:-1:exon

position:1301858:-1
position: 1301858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1301969:-1
position: 1301969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1299619-1299717:-1:exon

position:1299619:-1
position: 1299619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299717:-1
position: 1299717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1299052-1299263:-1:exon

position:1299052:-1
position: 1299052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1299263:-1
position: 1299263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1298547-1298726:-1:exon

position:1298547:-1
position: 1298547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298726:-1
position: 1298726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1297830-1297916:-1:exon

position:1297830:-1
position: 1297830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297916:-1
position: 1297916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1297536-1297629:-1:exon

position:1297536:-1
position: 1297536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297629:-1
position: 1297629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1297250-1297402:-1:exon

position:1297250:-1
position: 1297250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297402:-1
position: 1297402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1296693-1296904:-1:exon

position:1296693:-1
position: 1296693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296904:-1
position: 1296904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1296351-1296496:-1:exon

position:1296351:-1
position: 1296351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296496:-1
position: 1296496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1296002-1296080:-1:exon

position:1296002:-1
position: 1296002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296080:-1
position: 1296080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1295777-1295891:-1:exon

position:1295777:-1
position: 1295777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295891:-1
position: 1295891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1295459-1295623:-1:exon

position:1295459:-1
position: 1295459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1295623:-1
position: 1295623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1291915-1292093:-1:exon

position:1291915:-1
position: 1291915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292093:-1
position: 1292093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1291550-1291678:-1:exon

position:1291550:-1
position: 1291550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1291678:-1
position: 1291678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1290199-1291306:-1:exon

position:1291306:-1
position: 1291306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AFAP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AFAP1L1
product: actin filament associated protein 1 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016301721.1
SIO_010081: AFAP1L1
subclass of: SO_0000673
so part of: AFAP1L1
location: complement(join(1290199..1291306,1291550..1291678,1291915..1292093,1295459..1295623,1295777..1295894,1296002..1296080,1296351..1296496,1296693..1296904,1297250..1297402,1297536..1297629,1297830..1297916,1298547..1298726,1299052..1299263,1299619..1299717,1301858..1301969,1302085..1302182,1302490..1302573,1303002..1303130,1315076..1315128))
location: region:1290199-1315128:-1
so has part: feature:1315076-1315128:-1:exon
so has part: feature:1303002-1303130:-1:exon
so has part: feature:1302490-1302573:-1:exon
so has part: feature:1302085-1302182:-1:exon
so has part: feature:1301858-1301969:-1:exon
so has part: feature:1299619-1299717:-1:exon
so has part: feature:1299052-1299263:-1:exon
so has part: feature:1298547-1298726:-1:exon
so has part: feature:1297830-1297916:-1:exon
so has part: feature:1297536-1297629:-1:exon
so has part: feature:1297250-1297402:-1:exon
so has part: feature:1296693-1296904:-1:exon
so has part: feature:1296351-1296496:-1:exon
so has part: feature:1296002-1296080:-1:exon
so has part: feature:1295777-1295894:-1:exon
so has part: feature:1295459-1295623:-1:exon
so has part: feature:1291915-1292093:-1:exon
so has part: feature:1291550-1291678:-1:exon
so has part: feature:1290199-1291306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1315076-1315128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1303002-1303130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1302490-1302573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1302085-1302182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1301858-1301969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1299619-1299717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299052-1299263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298547-1298726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1297830-1297916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1297536-1297629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1297250-1297402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1296693-1296904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296351-1296496:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1296002-1296080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1295777-1295894:-1:exon

position:1295894:-1
position: 1295894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1295459-1295623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1291915-1292093:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1291550-1291678:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1290199-1291306:-1:exon

AFAP1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AFAP1L1
product: actin filament associated protein 1 like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005053663.1
SIO_010081: AFAP1L1
subclass of: SO_0000673
so part of: AFAP1L1
location: complement(join(1290199..1291306,1291550..1291678,1291915..1292093,1295459..1295623,1295777..1295894,1296002..1296080,1296351..1296496,1296693..1296904,1297250..1297402,1297536..1297629,1297830..1297916,1298547..1298726,1299052..1299263,1299619..1299717,1301858..1301969,1302085..1302182,1302490..1302573,1303002..1303130,1313615..1313656))
location: region:1290199-1313656:-1
so has part: feature:1313615-1313656:-1:exon
so has part: feature:1303002-1303130:-1:exon
so has part: feature:1302490-1302573:-1:exon
so has part: feature:1302085-1302182:-1:exon
so has part: feature:1301858-1301969:-1:exon
so has part: feature:1299619-1299717:-1:exon
so has part: feature:1299052-1299263:-1:exon
so has part: feature:1298547-1298726:-1:exon
so has part: feature:1297830-1297916:-1:exon
so has part: feature:1297536-1297629:-1:exon
so has part: feature:1297250-1297402:-1:exon
so has part: feature:1296693-1296904:-1:exon
so has part: feature:1296351-1296496:-1:exon
so has part: feature:1296002-1296080:-1:exon
so has part: feature:1295777-1295894:-1:exon
so has part: feature:1295459-1295623:-1:exon
so has part: feature:1291915-1292093:-1:exon
so has part: feature:1291550-1291678:-1:exon
so has part: feature:1290199-1291306:-1:exon

position:1313656:-1
position: 1313656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313615-1313656:-1:exon

position:1313615:-1
position: 1313615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1303002-1303130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1302490-1302573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1302085-1302182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1301858-1301969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1299619-1299717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299052-1299263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298547-1298726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1297830-1297916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1297536-1297629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1297250-1297402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1296693-1296904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296351-1296496:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1296002-1296080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1295777-1295894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1295459-1295623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1291915-1292093:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1291550-1291678:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1290199-1291306:-1:exon

AFAP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AFAP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin filament-associated protein 1-like 1 isoform X2
translation: MDSNSPPQGKVLDQLLPELSVLLKLLDHEYLSATTQEKKLAVSTILQKLQPPAGKDVDYMYVNTASLGNGTSFVESLFEEFDCDLRDLQDMQEEEGDTSDSIALELARNQPAKPVPVDPAPPLPTTPPPEDYYEEALPLGPGKAPEYITSRNSSSPPNSIEDGYYEDADSNYPVTRINGEQKNSYNDSDAMSSSYESYDEEEEEAKGQQLTHQWPSEEASMNLVKDCRICAFLLRKKRFGQWAKQLTIIRDGKLLCYKSSKDRQPHVEVPLATCNVIYVPKDGRRKKHELRFSLPGAEALVLAVQSKEQAEEWLKVIKEASSPAAGGMEAPTSPVMPCKMELDKRLSQEKHTSDSDSVAMGDTGSPATRREHGEHGKGKKSGLADLKGSMSRAAGKKITRIISFSKKKPSPEDTQTSSTEEDIPCCGYLSVLVNQCWKERWCRLKGNTLYFHKDRTDLRTHVNAIVLRGCEVLPGLGPKHPFAFRILRHGHEVTALEASCSEDLGRWLGLLLVETGSQTAPEALHYDYVDVETIANIVTAVRHSYLWASSSQDHRADSSRVVYDDVPYEKVQAEEEPGRPGAAQVKRHASSCSEKSRRVDPQVKVKRHASSANQYRYGKNRAEEDARRFLTEKEKLEKEKAAIRSELMLLRKEKRELREAMKGSTGPRLQELEQRVALLEERCRQKEESRVDLELKLTEVKEQLKQSLAGGPALGLAVTSKAENGETTNKANGNPPEHLVPVNCAAELRKRSPSIIPANTGSVLRKAKEWEKKQT
SIO_010081: AFAP1L1
subclass of: SO_0000673
so part of: AFAP1L1
location: complement(join(1291283..1291306,1291550..1291678,1291915..1292093,1295459..1295623,1295777..1295891,1296002..1296080,1296351..1296496,1296693..1296904,1297250..1297402,1297536..1297629,1297830..1297916,1298547..1298726,1299052..1299263,1299619..1299717,1301858..1301969,1302085..1302182,1302490..1302573,1303002..1303130,1315076..1315106))
location: region:1291283-1315106:-1
so has part: feature:1315076-1315106:-1:exon
so has part: feature:1303002-1303130:-1:exon
so has part: feature:1302490-1302573:-1:exon
so has part: feature:1302085-1302182:-1:exon
so has part: feature:1301858-1301969:-1:exon
so has part: feature:1299619-1299717:-1:exon
so has part: feature:1299052-1299263:-1:exon
so has part: feature:1298547-1298726:-1:exon
so has part: feature:1297830-1297916:-1:exon
so has part: feature:1297536-1297629:-1:exon
so has part: feature:1297250-1297402:-1:exon
so has part: feature:1296693-1296904:-1:exon
so has part: feature:1296351-1296496:-1:exon
so has part: feature:1296002-1296080:-1:exon
so has part: feature:1295777-1295891:-1:exon
so has part: feature:1295459-1295623:-1:exon
so has part: feature:1291915-1292093:-1:exon
so has part: feature:1291550-1291678:-1:exon
so has part: feature:1291283-1291306:-1:exon

XP_005053719.1
type: Protein
SIO_000068: ncbiprotein

position:1291283:-1
position: 1291283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315106:-1
position: 1315106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1315076-1315106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1303002-1303130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1302490-1302573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1302085-1302182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1301858-1301969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1299619-1299717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299052-1299263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298547-1298726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1297830-1297916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1297536-1297629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1297250-1297402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1296693-1296904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296351-1296496:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1296002-1296080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1295777-1295891:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1295459-1295623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1291915-1292093:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1291550-1291678:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1291283-1291306:-1:exon

AFAP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AFAP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin filament-associated protein 1-like 1 isoform X1
translation: MDSNSPPQGKVLDQLLPELSVLLKLLDHEYLSATTQEKKLAVSTILQKLQPPAGKDVDYMYVNTASLGNGTSFVESLFEEFDCDLRDLQDMQEEEGDTSDSIALELARNQPAKPVPVDPAPPLPTTPPPEDYYEEALPLGPGKAPEYITSRNSSSPPNSIEDGYYEDADSNYPVTRINGEQKNSYNDSDAMSSSYESYDEEEEEAKGQQLTHQWPSEEASMNLVKDCRICAFLLRKKRFGQWAKQLTIIRDGKLLCYKSSKDRQPHVEVPLATCNVIYVPKDGRRKKHELRFSLPGAEALVLAVQSKEQAEEWLKVIKEASSPAAGGMEAPTSPVMPCKMELDKRLSQEKHTSDSDSVAMGDTGSPATRREHGEHGKGKKSGLADLKGSMSRAAGKKITRIISFSKKKPSPEDTQTSSTEEDIPCCGYLSVLVNQCWKERWCRLKGNTLYFHKDRTDLRTHVNAIVLRGCEVLPGLGPKHPFAFRILRHGHEVTALEASCSEDLGRWLGLLLVETGSQTAPEALHYDYVDVETIANIVTAVRHSYLWASSSQDHRADSSRVVYDDVPYEKVQQAEEEPGRPGAAQVKRHASSCSEKSRRVDPQVKVKRHASSANQYRYGKNRAEEDARRFLTEKEKLEKEKAAIRSELMLLRKEKRELREAMKGSTGPRLQELEQRVALLEERCRQKEESRVDLELKLTEVKEQLKQSLAGGPALGLAVTSKAENGETTNKANGNPPEHLVPVNCAAELRKRSPSIIPANTGSVLRKAKEWEKKQT
SIO_010081: AFAP1L1
subclass of: SO_0000673
so part of: AFAP1L1
location: complement(join(1291283..1291306,1291550..1291678,1291915..1292093,1295459..1295623,1295777..1295894,1296002..1296080,1296351..1296496,1296693..1296904,1297250..1297402,1297536..1297629,1297830..1297916,1298547..1298726,1299052..1299263,1299619..1299717,1301858..1301969,1302085..1302182,1302490..1302573,1303002..1303130,1315076..1315106))
location: region:1291283-1315106:-1
so has part: feature:1315076-1315106:-1:exon
so has part: feature:1303002-1303130:-1:exon
so has part: feature:1302490-1302573:-1:exon
so has part: feature:1302085-1302182:-1:exon
so has part: feature:1301858-1301969:-1:exon
so has part: feature:1299619-1299717:-1:exon
so has part: feature:1299052-1299263:-1:exon
so has part: feature:1298547-1298726:-1:exon
so has part: feature:1297830-1297916:-1:exon
so has part: feature:1297536-1297629:-1:exon
so has part: feature:1297250-1297402:-1:exon
so has part: feature:1296693-1296904:-1:exon
so has part: feature:1296351-1296496:-1:exon
so has part: feature:1296002-1296080:-1:exon
so has part: feature:1295777-1295894:-1:exon
so has part: feature:1295459-1295623:-1:exon
so has part: feature:1291915-1292093:-1:exon
so has part: feature:1291550-1291678:-1:exon
so has part: feature:1291283-1291306:-1:exon

XP_016157207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1315076-1315106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1303002-1303130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1302490-1302573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1302085-1302182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1301858-1301969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1299619-1299717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299052-1299263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298547-1298726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1297830-1297916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1297536-1297629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1297250-1297402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1296693-1296904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296351-1296496:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1296002-1296080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1295777-1295894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1295459-1295623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1291915-1292093:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1291550-1291678:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1291283-1291306:-1:exon

AFAP1L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AFAP1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin filament-associated protein 1-like 1 isoform X3
translation: MDRLSVLDQLLPELSVLLKLLDHEYLSATTQEKKLAVSTILQKLQPPAGKDVDYMYVNTASLGNGTSFVESLFEEFDCDLRDLQDMQEEEGDTSDSIALELARNQPAKPVPVDPAPPLPTTPPPEDYYEEALPLGPGKAPEYITSRNSSSPPNSIEDGYYEDADSNYPVTRINGEQKNSYNDSDAMSSSYESYDEEEEEAKGQQLTHQWPSEEASMNLVKDCRICAFLLRKKRFGQWAKQLTIIRDGKLLCYKSSKDRQPHVEVPLATCNVIYVPKDGRRKKHELRFSLPGAEALVLAVQSKEQAEEWLKVIKEASSPAAGGMEAPTSPVMPCKMELDKRLSQEKHTSDSDSVAMGDTGSPATRREHGEHGKGKKSGLADLKGSMSRAAGKKITRIISFSKKKPSPEDTQTSSTEEDIPCCGYLSVLVNQCWKERWCRLKGNTLYFHKDRTDLRTHVNAIVLRGCEVLPGLGPKHPFAFRILRHGHEVTALEASCSEDLGRWLGLLLVETGSQTAPEALHYDYVDVETIANIVTAVRHSYLWASSSQDHRADSSRVVYDDVPYEKVQQAEEEPGRPGAAQVKRHASSCSEKSRRVDPQVKVKRHASSANQYRYGKNRAEEDARRFLTEKEKLEKEKAAIRSELMLLRKEKRELREAMKGSTGPRLQELEQRVALLEERCRQKEESRVDLELKLTEVKEQLKQSLAGGPALGLAVTSKAENGETTNKANGNPPEHLVPVNCAAELRKRSPSIIPANTGSVLRKAKEWEKKQT
SIO_010081: AFAP1L1
subclass of: SO_0000673
so part of: AFAP1L1
location: complement(join(1291283..1291306,1291550..1291678,1291915..1292093,1295459..1295623,1295777..1295894,1296002..1296080,1296351..1296496,1296693..1296904,1297250..1297402,1297536..1297629,1297830..1297916,1298547..1298726,1299052..1299263,1299619..1299717,1301858..1301969,1302085..1302182,1302490..1302573,1303002..1303130,1313615..1313630))
location: region:1291283-1313630:-1
so has part: feature:1313615-1313630:-1:exon
so has part: feature:1303002-1303130:-1:exon
so has part: feature:1302490-1302573:-1:exon
so has part: feature:1302085-1302182:-1:exon
so has part: feature:1301858-1301969:-1:exon
so has part: feature:1299619-1299717:-1:exon
so has part: feature:1299052-1299263:-1:exon
so has part: feature:1298547-1298726:-1:exon
so has part: feature:1297830-1297916:-1:exon
so has part: feature:1297536-1297629:-1:exon
so has part: feature:1297250-1297402:-1:exon
so has part: feature:1296693-1296904:-1:exon
so has part: feature:1296351-1296496:-1:exon
so has part: feature:1296002-1296080:-1:exon
so has part: feature:1295777-1295894:-1:exon
so has part: feature:1295459-1295623:-1:exon
so has part: feature:1291915-1292093:-1:exon
so has part: feature:1291550-1291678:-1:exon
so has part: feature:1291283-1291306:-1:exon

XP_005053720.1
type: Protein
SIO_000068: ncbiprotein

position:1313630:-1
position: 1313630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313615-1313630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1303002-1303130:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1302490-1302573:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1302085-1302182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1301858-1301969:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1299619-1299717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299052-1299263:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298547-1298726:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1297830-1297916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1297536-1297629:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1297250-1297402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1296693-1296904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1296351-1296496:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1296002-1296080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1295777-1295894:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1295459-1295623:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1291915-1292093:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1291550-1291678:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1291283-1291306:-1:exon

ABLIM3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1315821..1372615)
location: region:1315821-1372615:-1
so has part: feature:1315821-1372615:-1:exon
subclass of: SO_0000010

101808683
type: Gene
SIO_000068: ncbigene

position:1315821:-1
position: 1315821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372615:-1
position: 1372615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1315821-1372615:-1:exon

ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005053653.2
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1315821..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1321998,1323753..1323803,1324971..1325069,1325698..1325827,1326266..1326295,1327151..1327306,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372615))
location: region:1315821-1372615:-1
so has part: feature:1372391-1372615:-1:exon
so has part: feature:1335582-1335719:-1:exon
so has part: feature:1333376-1333559:-1:exon
so has part: feature:1333168-1333280:-1:exon
so has part: feature:1330991-1331117:-1:exon
so has part: feature:1330799-1330892:-1:exon
so has part: feature:1328497-1328584:-1:exon
so has part: feature:1327974-1328032:-1:exon
so has part: feature:1327651-1327722:-1:exon
so has part: feature:1327151-1327306:-1:exon
so has part: feature:1326266-1326295:-1:exon
so has part: feature:1325698-1325827:-1:exon
so has part: feature:1324971-1325069:-1:exon
so has part: feature:1323753-1323803:-1:exon
so has part: feature:1321879-1321998:-1:exon
so has part: feature:1321596-1321660:-1:exon
so has part: feature:1320014-1320161:-1:exon
so has part: feature:1319485-1319514:-1:exon
so has part: feature:1319049-1319107:-1:exon
so has part: feature:1318201-1318261:-1:exon
so has part: feature:1318048-1318055:-1:exon
so has part: feature:1317250-1317330:-1:exon
so has part: feature:1315821-1316809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1372391-1372615:-1:exon

position:1372391:-1
position: 1372391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1335582-1335719:-1:exon

position:1335582:-1
position: 1335582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335719:-1
position: 1335719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1333376-1333559:-1:exon

position:1333376:-1
position: 1333376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333559:-1
position: 1333559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1333168-1333280:-1:exon

position:1333168:-1
position: 1333168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333280:-1
position: 1333280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1330991-1331117:-1:exon

position:1330991:-1
position: 1330991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331117:-1
position: 1331117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1330799-1330892:-1:exon

position:1330799:-1
position: 1330799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1330892:-1
position: 1330892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1328497-1328584:-1:exon

position:1328497:-1
position: 1328497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328584:-1
position: 1328584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1327974-1328032:-1:exon

position:1327974:-1
position: 1327974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1328032:-1
position: 1328032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1327651-1327722:-1:exon

position:1327651:-1
position: 1327651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327722:-1
position: 1327722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1327151-1327306:-1:exon

position:1327151:-1
position: 1327151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1327306:-1
position: 1327306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1326266-1326295:-1:exon

position:1326266:-1
position: 1326266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1326295:-1
position: 1326295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1325698-1325827:-1:exon

position:1325698:-1
position: 1325698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325827:-1
position: 1325827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1324971-1325069:-1:exon

position:1324971:-1
position: 1324971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325069:-1
position: 1325069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1323753-1323803:-1:exon

position:1323753:-1
position: 1323753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323803:-1
position: 1323803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1321879-1321998:-1:exon

position:1321879:-1
position: 1321879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321998:-1
position: 1321998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
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ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005053657.2
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
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location: region:1315821-1372615:-1
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ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053659.2
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1315822..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1322013,1323753..1323803,1325698..1325827,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372615))
location: region:1315822-1372615:-1
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reference: sequence
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ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016301690.1
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1315822..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1322013,1323753..1323803,1324971..1325069,1325698..1325827,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372615))
location: region:1315822-1372615:-1
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urn:…
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ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005053655.2
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1315822..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1321998,1323753..1323803,1325698..1325827,1326266..1326295,1327151..1327306,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372615))
location: region:1315822-1372615:-1
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urn:…
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ABLIM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ABLIM3
product: actin binding LIM protein family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005053658.2
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1315822..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1322013,1323753..1323803,1325698..1325827,1326266..1326295,1327151..1327306,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372615))
location: region:1315822-1372615:-1
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urn:…
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urn:…
SIO_000300: 9
SIO_000628: feature:1327651-1327722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327151-1327306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326266-1326295:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1325698-1325827:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1323753-1323803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1321879-1322013:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1321596-1321660:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1320014-1320161:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1319485-1319514:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1319049-1319107:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1318201-1318261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1318048-1318055:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1317250-1317330:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1315822-1316809:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X6
translation: MSTSIPYQQNPYTPGSSSSAIQCYRCGDTCKGEVVRVQSNHFHIRCFTCQVCGCDLAQSGFFFKNQEYICTHDYQQLYGTRCDSCGDFITGEVISALGRTYHPKCFVCSTCRKPFPIGDKVTFSGKDCVCQNCSQSLLSTKPIKIHGPSHCAGCKEEIKQGQSLLALEKQWHVSCFKCQTCGIILTGEYISKDGIPYCESDYHAQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICDIYESFDTRQRRASSPGYIDSPTYSRQGMSPTMPRSPHHFYRSAAGESNIYRKPPIYKRHDNPSAATKSKTSEDIAQSSKYSPAYSPDPYYHSESEYWSFQGSPKAPRARRFSSGGEEDGYDRGMHKIQSGIGRLILREEMKARSNSYADPWTPPRSSASSREALHTLGYEGSLNGSPRTHYLADSDPLISKSASLPAYRRNGLHRPPSAELFHYDSTNAVNWGMREYKIYPYELLLVKTRGRNQLPKDVDRTRLERHLSQEEFYQIFGMTMAEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1316696..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1322013,1323753..1323803,1325698..1325827,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372403))
location: region:1316696-1372403:-1
so has part: feature:1372391-1372403:-1:exon
so has part: feature:1335582-1335719:-1:exon
so has part: feature:1333376-1333559:-1:exon
so has part: feature:1333168-1333280:-1:exon
so has part: feature:1330991-1331117:-1:exon
so has part: feature:1330799-1330892:-1:exon
so has part: feature:1328497-1328584:-1:exon
so has part: feature:1327974-1328032:-1:exon
so has part: feature:1327651-1327722:-1:exon
so has part: feature:1325698-1325827:-1:exon
so has part: feature:1323753-1323803:-1:exon
so has part: feature:1321879-1322013:-1:exon
so has part: feature:1321596-1321660:-1:exon
so has part: feature:1320014-1320161:-1:exon
so has part: feature:1319485-1319514:-1:exon
so has part: feature:1319049-1319107:-1:exon
so has part: feature:1318201-1318261:-1:exon
so has part: feature:1318048-1318055:-1:exon
so has part: feature:1317250-1317330:-1:exon
so has part: feature:1316696-1316809:-1:exon

XP_005053716.1
type: Protein
SIO_000068: ncbiprotein

position:1316696:-1
position: 1316696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1372403:-1
position: 1372403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1372391-1372403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335582-1335719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1333376-1333559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1333168-1333280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1330991-1331117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1330799-1330892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1328497-1328584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1327974-1328032:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1327651-1327722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1325698-1325827:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1323753-1323803:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1321879-1322013:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1321596-1321660:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1320014-1320161:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1319485-1319514:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1319049-1319107:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1318201-1318261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1318048-1318055:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1317250-1317330:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1316696-1316809:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X5
translation: MSTSIPYQQNPYTPGSSSSAIQCYRCGDTCKGEVVRVQSNHFHIRCFTCQVCGCDLAQSGFFFKNQEYICTHDYQQLYGTRCDSCGDFITGEVISALGRTYHPKCFVCSTCRKPFPIGDKVTFSGKDCVCQNCSQSLLSTKPIKIHGPSHCAGCKEEIKQGQSLLALEKQWHVSCFKCQTCGIILTGEYISKDGIPYCESDYHAQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICDIYESFDTRQRRASSPGYIDSPTYSRQGMSPTMPRSPHHFYRSGTESGRSSPYYSQLDVRSSTPTSYQAPKHFHIPAAGESNIYRKPPIYKRHDNPSAATKSKTSEDIAQSSKYSPAYSPDPYYHSESEYWSFQGSPKAPRARRFSSGGEEDGYDRGMHKIQSGIGRLILREEMKARSNSYADPWTPPRSSASSREALHTLGYEGSLNGSPRTHYLADSDPLISKSASLPAYRRNGLHRPPSAELFHYDSTNAVNWGMREYKIYPYELLLVKTRGRNQLPKDVDRTRLERHLSQEEFYQIFGMTMAEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1316696..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1322013,1323753..1323803,1324971..1325069,1325698..1325827,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372403))
location: region:1316696-1372403:-1
so has part: feature:1372391-1372403:-1:exon
so has part: feature:1335582-1335719:-1:exon
so has part: feature:1333376-1333559:-1:exon
so has part: feature:1333168-1333280:-1:exon
so has part: feature:1330991-1331117:-1:exon
so has part: feature:1330799-1330892:-1:exon
so has part: feature:1328497-1328584:-1:exon
so has part: feature:1327974-1328032:-1:exon
so has part: feature:1327651-1327722:-1:exon
so has part: feature:1325698-1325827:-1:exon
so has part: feature:1324971-1325069:-1:exon
so has part: feature:1323753-1323803:-1:exon
so has part: feature:1321879-1322013:-1:exon
so has part: feature:1321596-1321660:-1:exon
so has part: feature:1320014-1320161:-1:exon
so has part: feature:1319485-1319514:-1:exon
so has part: feature:1319049-1319107:-1:exon
so has part: feature:1318201-1318261:-1:exon
so has part: feature:1318048-1318055:-1:exon
so has part: feature:1317250-1317330:-1:exon
so has part: feature:1316696-1316809:-1:exon

XP_016157176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1372391-1372403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335582-1335719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1333376-1333559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1333168-1333280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1330991-1331117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1330799-1330892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1328497-1328584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1327974-1328032:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1327651-1327722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1325698-1325827:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1324971-1325069:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1323753-1323803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1321879-1322013:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1321596-1321660:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1320014-1320161:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1319485-1319514:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1319049-1319107:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1318201-1318261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1318048-1318055:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1317250-1317330:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1316696-1316809:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X4
translation: MSTSIPYQQNPYTPGSSSSAIQCYRCGDTCKGEVVRVQSNHFHIRCFTCQVCGCDLAQSGFFFKNQEYICTHDYQQLYGTRCDSCGDFITGEVISALGRTYHPKCFVCSTCRKPFPIGDKVTFSGKDCVCQNCSQSLLSTKPIKIHGPSHCAGCKEEIKQGQSLLALEKQWHVSCFKCQTCGIILTGEYISKDGIPYCESDYHAQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICAKVDNEILNYKDLAALPKIKAIYEVQRPDLISYEPYHRYTSDETLERYSYGESLGTLSPYSQDIYESFDTRQRRASSPGYIDSPTYSRQGMSPTMPRSPHHFYRSAAGESNIYRKPPIYKRHATKSKTSEDIAQSSKYSPAYSPDPYYHSESEYWSFQGSPKAPRARRFSSGGEEDGYDRGMHKIQSGIGRLILREEMKARSNSYADPWTPPRSSASSREALHTLGYEGSLNGSPRTHYLADSDPLISKSASLPAYRRNGLHRPPSAELFHYDSTNAVNWGMREYKIYPYELLLVKTRGRNQLPKDVDRTRLERHLSQEEFYQIFGMTMAEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1316696..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1321998,1323753..1323803,1325698..1325827,1326266..1326295,1327151..1327306,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372403))
location: region:1316696-1372403:-1
so has part: feature:1372391-1372403:-1:exon
so has part: feature:1335582-1335719:-1:exon
so has part: feature:1333376-1333559:-1:exon
so has part: feature:1333168-1333280:-1:exon
so has part: feature:1330991-1331117:-1:exon
so has part: feature:1330799-1330892:-1:exon
so has part: feature:1328497-1328584:-1:exon
so has part: feature:1327974-1328032:-1:exon
so has part: feature:1327651-1327722:-1:exon
so has part: feature:1327151-1327306:-1:exon
so has part: feature:1326266-1326295:-1:exon
so has part: feature:1325698-1325827:-1:exon
so has part: feature:1323753-1323803:-1:exon
so has part: feature:1321879-1321998:-1:exon
so has part: feature:1321596-1321660:-1:exon
so has part: feature:1320014-1320161:-1:exon
so has part: feature:1319485-1319514:-1:exon
so has part: feature:1319049-1319107:-1:exon
so has part: feature:1318201-1318261:-1:exon
so has part: feature:1318048-1318055:-1:exon
so has part: feature:1317250-1317330:-1:exon
so has part: feature:1316696-1316809:-1:exon

XP_005053712.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1372391-1372403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335582-1335719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1333376-1333559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1333168-1333280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1330991-1331117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1330799-1330892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1328497-1328584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1327974-1328032:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1327651-1327722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327151-1327306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326266-1326295:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1325698-1325827:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1323753-1323803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1321879-1321998:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1321596-1321660:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1320014-1320161:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1319485-1319514:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1319049-1319107:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1318201-1318261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1318048-1318055:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1317250-1317330:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1316696-1316809:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X3
translation: MSTSIPYQQNPYTPGSSSSAIQCYRCGDTCKGEVVRVQSNHFHIRCFTCQVCGCDLAQSGFFFKNQEYICTHDYQQLYGTRCDSCGDFITGEVISALGRTYHPKCFVCSTCRKPFPIGDKVTFSGKDCVCQNCSQSLLSTKPIKIHGPSHCAGCKEEIKQGQSLLALEKQWHVSCFKCQTCGIILTGEYISKDGIPYCESDYHAQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICAKVDNEILNYKDLAALPKIKAIYEVQRPDLISYEPYHRYTSDETLERYSYGESLGTLSPYSQDIYESFDTRQRRASSPGYIDSPTYSRQGMSPTMPRSPHHFYRSAAGESNIYRKPPIYKRHDNPSAATKSKTSEDIAQSSKYSPAYSPDPYYHSESEYWSFQGSPKAPRARRFSSGGEEDGYDRGMHKIQSGIGRLILREEMKARSNSYADPWTPPRSSASSREALHTLGYEGSLNGSPRTHYLADSDPLISKSASLPAYRRNGLHRPPSAELFHYDSTNAVNWGMREYKIYPYELLLVKTRGRNQLPKDVDRTRLERHLSQEEFYQIFGMTMAEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1316696..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1322013,1323753..1323803,1325698..1325827,1326266..1326295,1327151..1327306,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372403))
location: region:1316696-1372403:-1
so has part: feature:1372391-1372403:-1:exon
so has part: feature:1335582-1335719:-1:exon
so has part: feature:1333376-1333559:-1:exon
so has part: feature:1333168-1333280:-1:exon
so has part: feature:1330991-1331117:-1:exon
so has part: feature:1330799-1330892:-1:exon
so has part: feature:1328497-1328584:-1:exon
so has part: feature:1327974-1328032:-1:exon
so has part: feature:1327651-1327722:-1:exon
so has part: feature:1327151-1327306:-1:exon
so has part: feature:1326266-1326295:-1:exon
so has part: feature:1325698-1325827:-1:exon
so has part: feature:1323753-1323803:-1:exon
so has part: feature:1321879-1322013:-1:exon
so has part: feature:1321596-1321660:-1:exon
so has part: feature:1320014-1320161:-1:exon
so has part: feature:1319485-1319514:-1:exon
so has part: feature:1319049-1319107:-1:exon
so has part: feature:1318201-1318261:-1:exon
so has part: feature:1318048-1318055:-1:exon
so has part: feature:1317250-1317330:-1:exon
so has part: feature:1316696-1316809:-1:exon

XP_005053715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1372391-1372403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335582-1335719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1333376-1333559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1333168-1333280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1330991-1331117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1330799-1330892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1328497-1328584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1327974-1328032:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1327651-1327722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327151-1327306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326266-1326295:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1325698-1325827:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1323753-1323803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1321879-1322013:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1321596-1321660:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1320014-1320161:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1319485-1319514:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1319049-1319107:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1318201-1318261:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1318048-1318055:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1317250-1317330:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1316696-1316809:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X2
translation: MSTSIPYQQNPYTPGSSSSAIQCYRCGDTCKGEVVRVQSNHFHIRCFTCQVCGCDLAQSGFFFKNQEYICTHDYQQLYGTRCDSCGDFITGEVISALGRTYHPKCFVCSTCRKPFPIGDKVTFSGKDCVCQNCSQSLLSTKPIKIHGPSHCAGCKEEIKQGQSLLALEKQWHVSCFKCQTCGIILTGEYISKDGIPYCESDYHAQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICAKVDNEILNYKDLAALPKIKAIYEVQRPDLISYEPYHRYTSDETLERYSYGESLGTLSPYSQDIYESFDTRQRRASSPGYIDSPTYSRQGMSPTMPRSPHHFYRSGTESGRSSPYYSQLDVRSSTPTSYQAPKHFHIPAAGESNIYRKPPIYKRHATKSKTSEDIAQSSKYSPAYSPDPYYHSESEYWSFQGSPKAPRARRFSSGGEEDGYDRGMHKIQSGIGRLILREEMKARSNSYADPWTPPRSSASSREALHTLGYEGSLNGSPRTHYLADSDPLISKSASLPAYRRNGLHRPPSAELFHYDSTNAVNWGMREYKIYPYELLLVKTRGRNQLPKDVDRTRLERHLSQEEFYQIFGMTMAEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1316696..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1321998,1323753..1323803,1324971..1325069,1325698..1325827,1326266..1326295,1327151..1327306,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372403))
location: region:1316696-1372403:-1
so has part: feature:1372391-1372403:-1:exon
so has part: feature:1335582-1335719:-1:exon
so has part: feature:1333376-1333559:-1:exon
so has part: feature:1333168-1333280:-1:exon
so has part: feature:1330991-1331117:-1:exon
so has part: feature:1330799-1330892:-1:exon
so has part: feature:1328497-1328584:-1:exon
so has part: feature:1327974-1328032:-1:exon
so has part: feature:1327651-1327722:-1:exon
so has part: feature:1327151-1327306:-1:exon
so has part: feature:1326266-1326295:-1:exon
so has part: feature:1325698-1325827:-1:exon
so has part: feature:1324971-1325069:-1:exon
so has part: feature:1323753-1323803:-1:exon
so has part: feature:1321879-1321998:-1:exon
so has part: feature:1321596-1321660:-1:exon
so has part: feature:1320014-1320161:-1:exon
so has part: feature:1319485-1319514:-1:exon
so has part: feature:1319049-1319107:-1:exon
so has part: feature:1318201-1318261:-1:exon
so has part: feature:1318048-1318055:-1:exon
so has part: feature:1317250-1317330:-1:exon
so has part: feature:1316696-1316809:-1:exon

XP_005053710.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1372391-1372403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335582-1335719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1333376-1333559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1333168-1333280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1330991-1331117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1330799-1330892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1328497-1328584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1327974-1328032:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1327651-1327722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327151-1327306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326266-1326295:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1325698-1325827:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1324971-1325069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1323753-1323803:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1321879-1321998:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1321596-1321660:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1320014-1320161:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1319485-1319514:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1319049-1319107:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1318201-1318261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1318048-1318055:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1317250-1317330:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1316696-1316809:-1:exon

ABLIM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ABLIM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-binding LIM protein 3 isoform X1
translation: MSTSIPYQQNPYTPGSSSSAIQCYRCGDTCKGEVVRVQSNHFHIRCFTCQVCGCDLAQSGFFFKNQEYICTHDYQQLYGTRCDSCGDFITGEVISALGRTYHPKCFVCSTCRKPFPIGDKVTFSGKDCVCQNCSQSLLSTKPIKIHGPSHCAGCKEEIKQGQSLLALEKQWHVSCFKCQTCGIILTGEYISKDGIPYCESDYHAQFGIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEGEEMYLTGSEVWHPICKQAARAEKKLKHRRTSETSISPPGSSIGSPNRVICAKVDNEILNYKDLAALPKIKAIYEVQRPDLISYEPYHRYTSDETLERYSYGESLGTLSPYSQDIYESFDTRQRRASSPGYIDSPTYSRQGMSPTMPRSPHHFYRSGTESGRSSPYYSQLDVRSSTPTSYQAPKHFHIPAAGESNIYRKPPIYKRHDNPSAATKSKTSEDIAQSSKYSPAYSPDPYYHSESEYWSFQGSPKAPRARRFSSGGEEDGYDRGMHKIQSGIGRLILREEMKARSNSYADPWTPPRSSASSREALHTLGYEGSLNGSPRTHYLADSDPLISKSASLPAYRRNGLHRPPSAELFHYDSTNAVNWGMREYKIYPYELLLVKTRGRNQLPKDVDRTRLERHLSQEEFYQIFGMTMAEFDRLALWKRNELKKQARLF
SIO_010081: ABLIM3
subclass of: SO_0000673
so part of: ABLIM3
location: complement(join(1316696..1316809,1317250..1317330,1318048..1318055,1318201..1318261,1319049..1319107,1319485..1319514,1320014..1320161,1321596..1321660,1321879..1322013,1323753..1323803,1324971..1325069,1325698..1325827,1326266..1326295,1327151..1327306,1327651..1327722,1327974..1328032,1328497..1328584,1330799..1330892,1330991..1331117,1333168..1333280,1333376..1333559,1335582..1335719,1372391..1372403))
location: region:1316696-1372403:-1
so has part: feature:1372391-1372403:-1:exon
so has part: feature:1335582-1335719:-1:exon
so has part: feature:1333376-1333559:-1:exon
so has part: feature:1333168-1333280:-1:exon
so has part: feature:1330991-1331117:-1:exon
so has part: feature:1330799-1330892:-1:exon
so has part: feature:1328497-1328584:-1:exon
so has part: feature:1327974-1328032:-1:exon
so has part: feature:1327651-1327722:-1:exon
so has part: feature:1327151-1327306:-1:exon
so has part: feature:1326266-1326295:-1:exon
so has part: feature:1325698-1325827:-1:exon
so has part: feature:1324971-1325069:-1:exon
so has part: feature:1323753-1323803:-1:exon
so has part: feature:1321879-1322013:-1:exon
so has part: feature:1321596-1321660:-1:exon
so has part: feature:1320014-1320161:-1:exon
so has part: feature:1319485-1319514:-1:exon
so has part: feature:1319049-1319107:-1:exon
so has part: feature:1318201-1318261:-1:exon
so has part: feature:1318048-1318055:-1:exon
so has part: feature:1317250-1317330:-1:exon
so has part: feature:1316696-1316809:-1:exon

XP_005053714.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1372391-1372403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335582-1335719:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1333376-1333559:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1333168-1333280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1330991-1331117:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1330799-1330892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1328497-1328584:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1327974-1328032:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1327651-1327722:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1327151-1327306:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1326266-1326295:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1325698-1325827:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1324971-1325069:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1323753-1323803:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1321879-1322013:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1321596-1321660:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1320014-1320161:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1319485-1319514:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1319049-1319107:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1318201-1318261:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1318048-1318055:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1317250-1317330:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1316696-1316809:-1:exon

LOC107603952
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603952
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1357882..1358344
location: region:1357882-1358344:1
so has part: feature:1357882-1358344:1:exon
subclass of: SO_0000011

107603952
type: Gene
SIO_000068: ncbigene

position:1357882:1
position: 1357882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358344:1
position: 1358344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1357882-1358344:1:exon

LOC107603952
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107603952
product: uncharacterized LOC107603952
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001611786.1
SIO_010081: LOC107603952
subclass of: SO_0000673
so part of: LOC107603952
location: join(1357882..1357897,1358023..1358070,1358268..1358344)
location: region:1357882-1358344:1
so has part: feature:1357882-1357897:1:exon
so has part: feature:1358023-1358070:1:exon
so has part: feature:1358268-1358344:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1357882-1357897:1:exon

position:1357897:1
position: 1357897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1358023-1358070:1:exon

position:1358023:1
position: 1358023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358070:1
position: 1358070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1358268-1358344:1:exon

position:1358268:1
position: 1358268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH3TC2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SH3TC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1383047..1407222
location: region:1383047-1407222:1
so has part: feature:1383047-1407222:1:exon
subclass of: SO_0000010

101811275
type: Gene
SIO_000068: ncbigene

position:1383047:1
position: 1383047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1407222:1
position: 1407222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383047-1407222:1:exon

SH3TC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SH3TC2
product: SH3 domain and tetratricopeptide repeats 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301720.1
SIO_010081: SH3TC2
subclass of: SO_0000673
so part of: SH3TC2
location: join(1383047..1383572,1385171..1385573,1386996..1387142,1389331..1389426,1391623..1391750,1392143..1392248,1392534..1392677,1392771..1392972,1393453..1393526,1394259..1394454,1395327..1395463,1396301..1396342,1396609..1398303,1398390..1398570,1399917..1400067,1400531..1400653,1401032..1401182,1403685..1403881,1404093..1407222)
location: region:1383047-1407222:1
so has part: feature:1383047-1383572:1:exon
so has part: feature:1385171-1385573:1:exon
so has part: feature:1386996-1387142:1:exon
so has part: feature:1389331-1389426:1:exon
so has part: feature:1391623-1391750:1:exon
so has part: feature:1392143-1392248:1:exon
so has part: feature:1392534-1392677:1:exon
so has part: feature:1392771-1392972:1:exon
so has part: feature:1393453-1393526:1:exon
so has part: feature:1394259-1394454:1:exon
so has part: feature:1395327-1395463:1:exon
so has part: feature:1396301-1396342:1:exon
so has part: feature:1396609-1398303:1:exon
so has part: feature:1398390-1398570:1:exon
so has part: feature:1399917-1400067:1:exon
so has part: feature:1400531-1400653:1:exon
so has part: feature:1401032-1401182:1:exon
so has part: feature:1403685-1403881:1:exon
so has part: feature:1404093-1407222:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383047-1383572:1:exon

position:1383572:1
position: 1383572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1385171-1385573:1:exon

position:1385171:1
position: 1385171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385573:1
position: 1385573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1386996-1387142:1:exon

position:1386996:1
position: 1386996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387142:1
position: 1387142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1389331-1389426:1:exon

position:1389331:1
position: 1389331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1389426:1
position: 1389426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1391623-1391750:1:exon

position:1391623:1
position: 1391623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391750:1
position: 1391750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1392143-1392248:1:exon

position:1392143:1
position: 1392143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392248:1
position: 1392248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1392534-1392677:1:exon

position:1392534:1
position: 1392534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392677:1
position: 1392677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1392771-1392972:1:exon

position:1392771:1
position: 1392771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392972:1
position: 1392972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1393453-1393526:1:exon

position:1393453:1
position: 1393453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393526:1
position: 1393526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1394259-1394454:1:exon

position:1394259:1
position: 1394259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394454:1
position: 1394454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1395327-1395463:1:exon

position:1395327:1
position: 1395327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395463:1
position: 1395463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1396301-1396342:1:exon

position:1396301:1
position: 1396301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396342:1
position: 1396342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1396609-1398303:1:exon

position:1396609:1
position: 1396609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398303:1
position: 1398303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1398390-1398570:1:exon

position:1398390:1
position: 1398390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398570:1
position: 1398570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1399917-1400067:1:exon

position:1399917:1
position: 1399917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400067:1
position: 1400067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1400531-1400653:1:exon

position:1400531:1
position: 1400531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400653:1
position: 1400653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1401032-1401182:1:exon

position:1401032:1
position: 1401032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401182:1
position: 1401182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1403685-1403881:1:exon

position:1403685:1
position: 1403685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403881:1
position: 1403881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1404093-1407222:1:exon

position:1404093:1
position: 1404093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH3TC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SH3TC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain and tetratricopeptide repeat-containing protein 2
translation: MPVVLPAAPMVPREKERAGRSSRIRGSPGWRMLDGPQLDIPTGEECESCWPRSPELPPRWQRGQWRWDTSTAPGSQHQGMAPGMHLQGMASGKAEQSSPTPEAGHGSPDPSVALLALRDTFPPEISLSFSVESRSSRGRNSQLQEAARKKLWALESDDRSVCALFKELSARLVCMQAHEDRFLLTFKTLEEVWKFSTYLTLGYVGSCLEQLLFAQEFWLDCALVEDTELRVTMDEEHLATIYMDLLLQEGNFFSRAVPGAWKSEQEEEEGLQLCRNELIHVKSAGQDSRWEGMSLLTGQRGLVPLTALEPIAQPFYQWFLKNYAVSFGLSQEISGTSSQAIGKGRCIATKEHRGAAWDELSFSKGDPIEIIGFFIPGLPWFVGKSLSTGSIGFVPTQHVNPEACEPLGKGFVFLSEEEKSPVLQVPCNGDEQHFVTLLGDLAHTDITSVYRLAGFEPTAAFPQAPPEAAFHGSKEIQVLQSWEEISDWAASSTSELSSPGSETAPATLEDVLLDKLDDLDYPKFFIDLNAGHMEDADVFDPMLTFLNQDSFVPSFQSFYDLSFSFLHSTFYGFSDEDELVLYLETSRNWAKRTHSVWAHVRLCFLLGKLCIKKVKLSQARVYFEEAMSVLDRGFGDLPLLAALHVSLASIYLKQNMKHKFSSLLGKTVTLLVCLPGRSFSWENELELLTYVLRESIAAGNALLEARTCFLIVRLLLQLGRTEEVLPFLEHLQCLSSTWLSPGSRAGPLDAAATLGYLYDKKCLPNVALACVRAFAPSSTKGTPTPIWKAGFILQNASKLVGKQLDGSSIPAVACLYLKRALQFCCHSRAVPAQRTLCAVLSRLLLQHGRLDGALCDAARAAGLARLLGEEEAFESSLSLGWLHLLQQQPGPAGAVLRRCLRGTAGESQAGAVHNLLAMALGGQGRLQEAAENFLRALHKAKETGSGRNQAVALANLGQLSLSCGAAQLAELYLLWAVRLFAPLQGHRQLDTELAQVLLWLAQAMVDRQRMEDAKLCYELALGFALRWQNLRSQLHVTERLCHFYSRVCPELQACIAYHEHWASLARQLQDRELEGNARQALSQLYQALGTPQALRQSLDCTKQCLRIFIDLEEAARAAEAWLQAGKLYYLLQEDELVEMYFQAGIQTALRGDNFSLAMDLYEKAGDTFFNGSRNRARAVEFYRGGAVPLARKLKATQTELRLFNKLAELQISLQGYEKALEFATLAARLSLRVGDQLQELVAFHRLATAYELLHMYEMAEDCYLKTLALRPPVLQSSAEALYYCKLYWHLGNLTLHKLKDEQDASSYFLLALAAAAELGDQELQAQLCAKLAAVPRAPGAPEGTAGCATERPRWLSEGGHVV
SIO_010081: SH3TC2
subclass of: SO_0000673
so part of: SH3TC2
location: join(1385447..1385573,1386996..1387142,1389331..1389426,1391623..1391750,1392143..1392248,1392534..1392677,1392771..1392972,1393453..1393526,1394259..1394454,1395327..1395463,1396301..1396342,1396609..1398303,1398390..1398570,1399917..1400067,1400531..1400653,1401032..1401182,1403685..1403881,1404093..1404284)
location: region:1385447-1404284:1
so has part: feature:1385447-1385573:1:exon
so has part: feature:1386996-1387142:1:exon
so has part: feature:1389331-1389426:1:exon
so has part: feature:1391623-1391750:1:exon
so has part: feature:1392143-1392248:1:exon
so has part: feature:1392534-1392677:1:exon
so has part: feature:1392771-1392972:1:exon
so has part: feature:1393453-1393526:1:exon
so has part: feature:1394259-1394454:1:exon
so has part: feature:1395327-1395463:1:exon
so has part: feature:1396301-1396342:1:exon
so has part: feature:1396609-1398303:1:exon
so has part: feature:1398390-1398570:1:exon
so has part: feature:1399917-1400067:1:exon
so has part: feature:1400531-1400653:1:exon
so has part: feature:1401032-1401182:1:exon
so has part: feature:1403685-1403881:1:exon
so has part: feature:1404093-1404284:1:exon

XP_016157206.1
type: Protein
SIO_000068: ncbiprotein

position:1385447:1
position: 1385447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404284:1
position: 1404284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1385447-1385573:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1386996-1387142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1389331-1389426:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391623-1391750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1392143-1392248:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1392534-1392677:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1392771-1392972:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393453-1393526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1394259-1394454:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395327-1395463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1396301-1396342:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396609-1398303:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1398390-1398570:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1399917-1400067:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1400531-1400653:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1401032-1401182:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1403685-1403881:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1404093-1404284:1:exon

ADRB2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ADRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1423907..1455118)
location: region:1423907-1455118:-1
so has part: feature:1423907-1455118:-1:exon
subclass of: SO_0000010

101808483
type: Gene
SIO_000068: ncbigene

position:1423907:-1
position: 1423907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1455118:-1
position: 1455118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1423907-1455118:-1:exon

ADRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ADRB2
product: adrenoceptor beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005053651.2
SIO_010081: ADRB2
subclass of: SO_0000673
so part of: ADRB2
location: complement(join(1423907..1426395,1453940..1455118))
location: region:1423907-1455118:-1
so has part: feature:1453940-1455118:-1:exon
so has part: feature:1423907-1426395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1453940-1455118:-1:exon

position:1453940:-1
position: 1453940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1423907-1426395:-1:exon

position:1426395:-1
position: 1426395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ADRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2 adrenergic receptor
translation: MATAGTELPGGNASANQSAADPTVSRDVWVVGMGILMSLIVLAIVFGNVLVITAIARFQRLQTVTNYFISSLACADLVMGLAVVPFGACHIIMEMWKFGNFWCEFWTSVDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKGKARVVILVVWVVSGLTSFLPIQMHWYRADHEDAIRCYEDEMCCDFFTNQAYAIASSIISFYLPLVVMVFVYARVFQVAKKQLQKIDRSEGRFHTQNKEQEQKGGAGHRRSSKFFLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNIIPKYVYILLNWLGYVNSAFNPLIYCRSPDFRYAFQELLCLRRSALKMYANGYSNSNGRSDYNEEENGYPLAPDKSCELLCEEGSFPRPEDFLHGKEIPGCPGMVES
SIO_010081: ADRB2
subclass of: SO_0000673
so part of: ADRB2
location: complement(join(1426361..1426395,1453940..1455113))
location: region:1426361-1455113:-1
so has part: feature:1453940-1455113:-1:exon
so has part: feature:1426361-1426395:-1:exon

XP_005053708.1
type: Protein
SIO_000068: ncbiprotein

position:1426361:-1
position: 1426361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1455113:-1
position: 1455113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1453940-1455113:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1426361-1426395:-1:exon

UBTD2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: UBTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1565589..1582754
location: region:1565589-1582754:1
so has part: feature:1565589-1582754:1:exon
subclass of: SO_0000010

101811083
type: Gene
SIO_000068: ncbigene

position:1565589:1
position: 1565589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582754:1
position: 1582754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565589-1582754:1:exon

UBTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: UBTD2
product: ubiquitin domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016301752.1
SIO_010081: UBTD2
subclass of: SO_0000673
so part of: UBTD2
location: join(1565589..1565827,1581586..1582754)
location: region:1565589-1582754:1
so has part: feature:1565589-1565827:1:exon
so has part: feature:1581586-1582754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1565589-1565827:1:exon

position:1565827:1
position: 1565827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1581586-1582754:1:exon

position:1581586:1
position: 1581586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: UBTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin domain-containing protein 2
translation: MTDGQLRSKRDEFWDTAPAFEGRKEIWDALKAAAHAFESNDHELAQAIIDGANITLPHGALTECYDELGNRYQLPVYCLAPPVNMIEEKGDLESLDIPEPPASSGHECQLRLRLSTGKDLRLAVRSLDSVYHMKRRLHAAEGVEPASQRWFFSGRPLADKMKLEELKIPKDYVVQVIVSQPLANPTPVEN
SIO_010081: UBTD2
subclass of: SO_0000673
so part of: UBTD2
location: join(1565653..1565827,1581586..1581983)
location: region:1565653-1581983:1
so has part: feature:1565653-1565827:1:exon
so has part: feature:1581586-1581983:1:exon

XP_016157238.1
type: Protein
SIO_000068: ncbiprotein

position:1565653:1
position: 1565653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581983:1
position: 1581983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565653-1565827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1581586-1581983:1:exon

STK10
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: STK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1600538..1653193
location: region:1600538-1653193:1
so has part: feature:1600538-1653193:1:exon
subclass of: SO_0000010

101808281
type: Gene
SIO_000068: ncbigene

position:1600538:1
position: 1600538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653193:1
position: 1653193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600538-1653193:1:exon

STK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: STK10
product: serine/threonine kinase 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301623.1
SIO_010081: STK10
subclass of: SO_0000673
so part of: STK10
location: join(1600538..1600837,1611032..1611196,1626856..1626904,1628375..1628524,1630803..1630875,1631452..1631646,1633726..1633807,1636273..1636556,1637092..1637104,1637556..1637873,1640384..1640514,1643275..1643398,1645902..1646081,1647299..1647391,1647550..1647679,1648079..1648203,1649141..1649329,1651518..1651643,1651882..1651995,1652111..1653193)
location: region:1600538-1653193:1
so has part: feature:1600538-1600837:1:exon
so has part: feature:1611032-1611196:1:exon
so has part: feature:1626856-1626904:1:exon
so has part: feature:1628375-1628524:1:exon
so has part: feature:1630803-1630875:1:exon
so has part: feature:1631452-1631646:1:exon
so has part: feature:1633726-1633807:1:exon
so has part: feature:1636273-1636556:1:exon
so has part: feature:1637092-1637104:1:exon
so has part: feature:1637556-1637873:1:exon
so has part: feature:1640384-1640514:1:exon
so has part: feature:1643275-1643398:1:exon
so has part: feature:1645902-1646081:1:exon
so has part: feature:1647299-1647391:1:exon
so has part: feature:1647550-1647679:1:exon
so has part: feature:1648079-1648203:1:exon
so has part: feature:1649141-1649329:1:exon
so has part: feature:1651518-1651643:1:exon
so has part: feature:1651882-1651995:1:exon
so has part: feature:1652111-1653193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1600538-1600837:1:exon

position:1600837:1
position: 1600837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1611032-1611196:1:exon

position:1611032:1
position: 1611032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1611196:1
position: 1611196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1626856-1626904:1:exon

position:1626856:1
position: 1626856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626904:1
position: 1626904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1628375-1628524:1:exon

position:1628375:1
position: 1628375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628524:1
position: 1628524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1630803-1630875:1:exon

position:1630803:1
position: 1630803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630875:1
position: 1630875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1631452-1631646:1:exon

position:1631452:1
position: 1631452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1631646:1
position: 1631646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1633726-1633807:1:exon

position:1633726:1
position: 1633726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1633807:1
position: 1633807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1636273-1636556:1:exon

position:1636273:1
position: 1636273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636556:1
position: 1636556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1637092-1637104:1:exon

position:1637092:1
position: 1637092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1637104:1
position: 1637104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1637556-1637873:1:exon

position:1637556:1
position: 1637556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1637873:1
position: 1637873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1640384-1640514:1:exon

position:1640384:1
position: 1640384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640514:1
position: 1640514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1643275-1643398:1:exon

position:1643275:1
position: 1643275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1643398:1
position: 1643398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1645902-1646081:1:exon

position:1645902:1
position: 1645902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646081:1
position: 1646081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1647299-1647391:1:exon

position:1647299:1
position: 1647299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647391:1
position: 1647391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1647550-1647679:1:exon

position:1647550:1
position: 1647550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1647679:1
position: 1647679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1648079-1648203:1:exon

position:1648079:1
position: 1648079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648203:1
position: 1648203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1649141-1649329:1:exon

position:1649141:1
position: 1649141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1649329:1
position: 1649329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1651518-1651643:1:exon

position:1651518:1
position: 1651518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651643:1
position: 1651643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1651882-1651995:1:exon

position:1651882:1
position: 1651882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651995:1
position: 1651995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1652111-1653193:1:exon

position:1652111:1
position: 1652111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: STK10
product: serine/threonine kinase 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301622.1
SIO_010081: STK10
subclass of: SO_0000673
so part of: STK10
location: join(1600538..1600837,1611032..1611196,1626856..1626904,1628375..1628524,1630803..1630875,1631452..1631646,1633726..1633807,1636273..1636341,1636402..1636467,1637151..1637425,1637585..1637873,1640384..1640514,1643275..1643398,1645902..1646081,1647299..1647391,1647550..1647679,1648079..1648203,1649141..1649329,1651518..1651643,1651882..1651995,1652111..1653193)
location: region:1600538-1653193:1
so has part: feature:1600538-1600837:1:exon
so has part: feature:1611032-1611196:1:exon
so has part: feature:1626856-1626904:1:exon
so has part: feature:1628375-1628524:1:exon
so has part: feature:1630803-1630875:1:exon
so has part: feature:1631452-1631646:1:exon
so has part: feature:1633726-1633807:1:exon
so has part: feature:1636273-1636341:1:exon
so has part: feature:1636402-1636467:1:exon
so has part: feature:1637151-1637425:1:exon
so has part: feature:1637585-1637873:1:exon
so has part: feature:1640384-1640514:1:exon
so has part: feature:1643275-1643398:1:exon
so has part: feature:1645902-1646081:1:exon
so has part: feature:1647299-1647391:1:exon
so has part: feature:1647550-1647679:1:exon
so has part: feature:1648079-1648203:1:exon
so has part: feature:1649141-1649329:1:exon
so has part: feature:1651518-1651643:1:exon
so has part: feature:1651882-1651995:1:exon
so has part: feature:1652111-1653193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1600538-1600837:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1611032-1611196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1626856-1626904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1628375-1628524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1630803-1630875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1631452-1631646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1633726-1633807:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1636273-1636341:1:exon

position:1636341:1
position: 1636341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1636402-1636467:1:exon

position:1636402:1
position: 1636402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636467:1
position: 1636467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1637151-1637425:1:exon

position:1637151:1
position: 1637151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1637425:1
position: 1637425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1637585-1637873:1:exon

position:1637585:1
position: 1637585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1640384-1640514:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1643275-1643398:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1645902-1646081:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1647299-1647391:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1647550-1647679:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1648079-1648203:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1649141-1649329:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1651518-1651643:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1651882-1651995:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1652111-1653193:1:exon

STK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: STK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 10 isoform X2
translation: MCALGAAPVPVPPRRSRGSALGPQRAAAPRSAMAFANFRRILRLSAFEKRRSKEYEHVRRDLDPGEVWEVVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEDELEDYMVEIEILATCDHPHIVKLLGAFYWDGKLWIMIEFCPGGAVDATMLELDRGLTEPQIQVICRQMLEALHYLHSKRIIHRDLKAGNVLLTQDGDIKLADFGVSAKNMKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSCPSKWSLEFRDFLKKALDKNPESRPSAAQLLEHPFVSRVTSSRALRELVAEAKAEVMEEIEESREEAEEEEAKAEVMEEIEESREEAEEEDSSESASVGEQLQRPAVLGERAWQMFQPPESLLGHVRGLAVSVEERKSMVEKSMEERKSVEERKSMVERKSMEERKSMVERPESVLLENVSEEKLPNGTLEPLGPFPGRSKRDSDSGSTSASESLDLSISLSADLSLSRESGSISLKDSQMHKKTLKRTRKFVVDGVEVSVTTSKIISEDEKKDEEMRFLRRQELRELRLLQKEEHRNQAQLNSKHQLQLEQMLRRFEQEMMAKKKFYEAELEGLERQQKQQIERVEQEHALRRREEARRIRLEQERQHGRFLEQLRQMKREVKNEVEKLPRQQRKGNLKAKMDDFTQKKQAMEQEFLAKQKEDLEQAMKNITAQNKREICDKERECLNKKQQLMRDREACIWDLEERQQQEKHQLIKQQLKDQYFLQRHELLRKHEKEREQMQRYNQRMLEQLRARQQQERARLPKIQRSEGKTRMAMYKKSLHIHCSGSAAEHRDKIKQFALQEEKRQKAERLQQQQKHESQMKDMQAQCESNASELQHLQNEKCHLLIEHETQKLKSLDESHNQHMKEWRDKLRPRKKALEDELNQKKREQEMFFKLSEEADGQVPVSPTKHAKFVPFSSSESL
SIO_010081: STK10
subclass of: SO_0000673
so part of: STK10
location: join(1600586..1600837,1611032..1611196,1626856..1626904,1628375..1628524,1630803..1630875,1631452..1631646,1633726..1633807,1636273..1636556,1637092..1637104,1637556..1637873,1640384..1640514,1643275..1643398,1645902..1646081,1647299..1647391,1647550..1647679,1648079..1648203,1649141..1649329,1651518..1651643,1651882..1651995,1652111..1652251)
location: region:1600586-1652251:1
so has part: feature:1600586-1600837:1:exon
so has part: feature:1611032-1611196:1:exon
so has part: feature:1626856-1626904:1:exon
so has part: feature:1628375-1628524:1:exon
so has part: feature:1630803-1630875:1:exon
so has part: feature:1631452-1631646:1:exon
so has part: feature:1633726-1633807:1:exon
so has part: feature:1636273-1636556:1:exon
so has part: feature:1637092-1637104:1:exon
so has part: feature:1637556-1637873:1:exon
so has part: feature:1640384-1640514:1:exon
so has part: feature:1643275-1643398:1:exon
so has part: feature:1645902-1646081:1:exon
so has part: feature:1647299-1647391:1:exon
so has part: feature:1647550-1647679:1:exon
so has part: feature:1648079-1648203:1:exon
so has part: feature:1649141-1649329:1:exon
so has part: feature:1651518-1651643:1:exon
so has part: feature:1651882-1651995:1:exon
so has part: feature:1652111-1652251:1:exon

XP_016157109.1
type: Protein
SIO_000068: ncbiprotein

position:1600586:1
position: 1600586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652251:1
position: 1652251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1600586-1600837:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1611032-1611196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1626856-1626904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1628375-1628524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1630803-1630875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1631452-1631646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1633726-1633807:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1636273-1636556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1637092-1637104:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1637556-1637873:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640384-1640514:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1643275-1643398:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1645902-1646081:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1647299-1647391:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1647550-1647679:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1648079-1648203:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1649141-1649329:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1651518-1651643:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1651882-1651995:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1652111-1652251:1:exon

STK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: STK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase 10 isoform X1
translation: MCALGAAPVPVPPRRSRGSALGPQRAAAPRSAMAFANFRRILRLSAFEKRRSKEYEHVRRDLDPGEVWEVVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEDELEDYMVEIEILATCDHPHIVKLLGAFYWDGKLWIMIEFCPGGAVDATMLELDRGLTEPQIQVICRQMLEALHYLHSKRIIHRDLKAGNVLLTQDGDIKLADFGVSAKNMKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSCPSKWSLEFRDFLKKALDKNPESRPSAAQLLEHPFVSRVTSSRALRELVAEAKAEVMEEIEESREEAEEEDSSESASPPGKHKRDPSEASQLSFDGEKPPDSSLPKAVNGSLGTGKDSTDGQSHKGTSSDKLESKHSTKPSQDKPDIILQPGHLGNSTEGNKELGREERKSMEERKSVEERKSMVERKSMEERKSMVERPESVLLENVSEEKLPNGTLEPLGPFPGRSKRDSDSGSTSASESLDLSISLSADLSLSRESGSISLKDSQMHKKTLKRTRKFVVDGVEVSVTTSKIISEDEKKDEEMRFLRRQELRELRLLQKEEHRNQAQLNSKHQLQLEQMLRRFEQEMMAKKKFYEAELEGLERQQKQQIERVEQEHALRRREEARRIRLEQERQHGRFLEQLRQMKREVKNEVEKLPRQQRKGNLKAKMDDFTQKKQAMEQEFLAKQKEDLEQAMKNITAQNKREICDKERECLNKKQQLMRDREACIWDLEERQQQEKHQLIKQQLKDQYFLQRHELLRKHEKEREQMQRYNQRMLEQLRARQQQERARLPKIQRSEGKTRMAMYKKSLHIHCSGSAAEHRDKIKQFALQEEKRQKAERLQQQQKHESQMKDMQAQCESNASELQHLQNEKCHLLIEHETQKLKSLDESHNQHMKEWRDKLRPRKKALEDELNQKKREQEMFFKLSEEADGQVPVSPTKHAKFVPFSSSESL
SIO_010081: STK10
subclass of: SO_0000673
so part of: STK10
location: join(1600586..1600837,1611032..1611196,1626856..1626904,1628375..1628524,1630803..1630875,1631452..1631646,1633726..1633807,1636273..1636341,1636402..1636467,1637151..1637425,1637585..1637873,1640384..1640514,1643275..1643398,1645902..1646081,1647299..1647391,1647550..1647679,1648079..1648203,1649141..1649329,1651518..1651643,1651882..1651995,1652111..1652251)
location: region:1600586-1652251:1
so has part: feature:1600586-1600837:1:exon
so has part: feature:1611032-1611196:1:exon
so has part: feature:1626856-1626904:1:exon
so has part: feature:1628375-1628524:1:exon
so has part: feature:1630803-1630875:1:exon
so has part: feature:1631452-1631646:1:exon
so has part: feature:1633726-1633807:1:exon
so has part: feature:1636273-1636341:1:exon
so has part: feature:1636402-1636467:1:exon
so has part: feature:1637151-1637425:1:exon
so has part: feature:1637585-1637873:1:exon
so has part: feature:1640384-1640514:1:exon
so has part: feature:1643275-1643398:1:exon
so has part: feature:1645902-1646081:1:exon
so has part: feature:1647299-1647391:1:exon
so has part: feature:1647550-1647679:1:exon
so has part: feature:1648079-1648203:1:exon
so has part: feature:1649141-1649329:1:exon
so has part: feature:1651518-1651643:1:exon
so has part: feature:1651882-1651995:1:exon
so has part: feature:1652111-1652251:1:exon

XP_016157108.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1600586-1600837:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1611032-1611196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1626856-1626904:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1628375-1628524:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1630803-1630875:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1631452-1631646:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1633726-1633807:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1636273-1636341:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1636402-1636467:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1637151-1637425:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1637585-1637873:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1640384-1640514:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1643275-1643398:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1645902-1646081:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1647299-1647391:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1647550-1647679:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1648079-1648203:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1649141-1649329:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1651518-1651643:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1651882-1651995:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1652111-1652251:1:exon

SH3PXD2B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SH3PXD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1661734..1733778
location: region:1661734-1733778:1
so has part: feature:1661734-1733778:1:exon
subclass of: SO_0000010

101808095
type: Gene
SIO_000068: ncbigene

position:1661734:1
position: 1661734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733778:1
position: 1733778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1661734-1733778:1:exon

SH3PXD2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SH3PXD2B
product: SH3 and PX domains 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005053649.2
SIO_010081: SH3PXD2B
subclass of: SO_0000673
so part of: SH3PXD2B
location: join(1661734..1661885,1671829..1671909,1687692..1687767,1696215..1696291,1700510..1700601,1710548..1710573,1719765..1719899,1721179..1721283,1723041..1723158,1724253..1724479,1728494..1728543,1728704..1728829,1729584..1733778)
location: region:1661734-1733778:1
so has part: feature:1661734-1661885:1:exon
so has part: feature:1671829-1671909:1:exon
so has part: feature:1687692-1687767:1:exon
so has part: feature:1696215-1696291:1:exon
so has part: feature:1700510-1700601:1:exon
so has part: feature:1710548-1710573:1:exon
so has part: feature:1719765-1719899:1:exon
so has part: feature:1721179-1721283:1:exon
so has part: feature:1723041-1723158:1:exon
so has part: feature:1724253-1724479:1:exon
so has part: feature:1728494-1728543:1:exon
so has part: feature:1728704-1728829:1:exon
so has part: feature:1729584-1733778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1661734-1661885:1:exon

position:1661885:1
position: 1661885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1671829-1671909:1:exon

position:1671829:1
position: 1671829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671909:1
position: 1671909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1687692-1687767:1:exon

position:1687692:1
position: 1687692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687767:1
position: 1687767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1696215-1696291:1:exon

position:1696215:1
position: 1696215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696291:1
position: 1696291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1700510-1700601:1:exon

position:1700510:1
position: 1700510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700601:1
position: 1700601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1710548-1710573:1:exon

position:1710548:1
position: 1710548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1710573:1
position: 1710573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1719765-1719899:1:exon

position:1719765:1
position: 1719765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719899:1
position: 1719899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1721179-1721283:1:exon

position:1721179:1
position: 1721179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1721283:1
position: 1721283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1723041-1723158:1:exon

position:1723041:1
position: 1723041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723158:1
position: 1723158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1724253-1724479:1:exon

position:1724253:1
position: 1724253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1724479:1
position: 1724479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1728494-1728543:1:exon

position:1728494:1
position: 1728494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728543:1
position: 1728543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1728704-1728829:1:exon

position:1728704:1
position: 1728704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1728829:1
position: 1728829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1729584-1733778:1:exon

position:1729584:1
position: 1729584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH3PXD2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SH3PXD2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 and PX domain-containing protein 2B
translation: MWCLLWLEPAVSRAKVYIIKVTWSNGATEVIYRRYSKFFDLQMQMLDKFPMEGGQKDPKQRIIPFLPGKILFRRSHIRDVAVKRLIPIDEYCKALIQLPPYISQCEEVLQFFETRPDDLTPPKEEPIGKKRSGADCASAEPLVLEQYVVVADYQKQESSEISLCVGQVVEIIEKNESGWWFVSTLEEQGWVPATCLEAQDGVQDEFSMQPDEEEKYTVIYPYTARDQDEMNLDKGAVVVVIQKNLEGWWKIRYQGQEGWAPASYLRKGNGDVFPPKLGSGSSAHSSALELDGVCRQQVLASRDKDGLGGPRDGRLESRALASADIRRKSPKMRQRPPPRRDLTIPRGLNLPKPPVPPQVEEEYYTIADFQTTIPDGISFQAGMKVEVIEKNLSGWWYIQIEEKEGWAPATFIDKYKKTSNASRPNFLAPLAAEMAQLRRGDAEGSASEEGTGPCRPLPEAPPNGTDCAGRWGKDWKGKEAPDSGGDLSFAGGYEEIPERDTEEKPSLPPRKESIIKSEGELLERQRPPPKPPGMILPMIPPKQSAAPKDSKRPELKPEKGKLFQLKNEMGLECGHKVSAKEVKKPNLRPIVKPTKPKAEPAEDKPEPIAQNLFLKSRPQIRPKPAASPRPEPPPADDKLDICSLRSKLRPAKGPEKPLEQDCPAESSFSSAVLPSEPCARFPGLEGKALPKLDSAPKEALPKSPLGPASPPCARDAPLQRPVVPPRRPPPPKKLGAAACAPAEPRAPAVPGRPMLVPPKAKPFLSAALQDEAKARSSVNPKVTSKPVERGEAKERPSAPISSQDTSREALYVAVADFEGDEETNSFREGTLFEVREKNSSGWWFCKVLAGGPCWEGWIPSNYLRKKP
SIO_010081: SH3PXD2B
subclass of: SO_0000673
so part of: SH3PXD2B
location: join(1661841..1661885,1671829..1671909,1687692..1687767,1696215..1696291,1700510..1700601,1710548..1710573,1719765..1719899,1721179..1721283,1723041..1723158,1724253..1724479,1728494..1728543,1728704..1728829,1729584..1731029)
location: region:1661841-1731029:1
so has part: feature:1661841-1661885:1:exon
so has part: feature:1671829-1671909:1:exon
so has part: feature:1687692-1687767:1:exon
so has part: feature:1696215-1696291:1:exon
so has part: feature:1700510-1700601:1:exon
so has part: feature:1710548-1710573:1:exon
so has part: feature:1719765-1719899:1:exon
so has part: feature:1721179-1721283:1:exon
so has part: feature:1723041-1723158:1:exon
so has part: feature:1724253-1724479:1:exon
so has part: feature:1728494-1728543:1:exon
so has part: feature:1728704-1728829:1:exon
so has part: feature:1729584-1731029:1:exon

XP_005053706.1
type: Protein
SIO_000068: ncbiprotein

position:1661841:1
position: 1661841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1731029:1
position: 1731029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1661841-1661885:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1671829-1671909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1687692-1687767:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696215-1696291:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1700510-1700601:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1710548-1710573:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1719765-1719899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1721179-1721283:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1723041-1723158:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1724253-1724479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1728494-1728543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1728704-1728829:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1729584-1731029:1:exon

NEURL1B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NEURL1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1737379..1833559)
location: region:1737379-1833559:-1
so has part: feature:1737379-1833559:-1:exon
subclass of: SO_0000010

101810886
type: Gene
SIO_000068: ncbigene

position:1737379:-1
position: 1737379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1833559:-1
position: 1833559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1737379-1833559:-1:exon

NEURL1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NEURL1B
product: neuralized E3 ubiquitin protein ligase 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005053754.2
SIO_010081: NEURL1B
subclass of: SO_0000673
so part of: NEURL1B
location: complement(join(1737379..1738588,1739278..1739403,1740304..1741011,1743654..1744227,1799785..1800017,1833511..1833559))
location: region:1737379-1833559:-1
so has part: feature:1833511-1833559:-1:exon
so has part: feature:1799785-1800017:-1:exon
so has part: feature:1743654-1744227:-1:exon
so has part: feature:1740304-1741011:-1:exon
so has part: feature:1739278-1739403:-1:exon
so has part: feature:1737379-1738588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1833511-1833559:-1:exon

position:1833511:-1
position: 1833511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1799785-1800017:-1:exon

position:1799785:-1
position: 1799785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1800017:-1
position: 1800017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1743654-1744227:-1:exon

position:1743654:-1
position: 1743654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1744227:-1
position: 1744227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1740304-1741011:-1:exon

position:1740304:-1
position: 1740304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741011:-1
position: 1741011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1739278-1739403:-1:exon

position:1739278:-1
position: 1739278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1739403:-1
position: 1739403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1737379-1738588:-1:exon

position:1738588:-1
position: 1738588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEURL1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NEURL1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase NEURL1B
translation: MSLRREAQRGKGSTLQGDLDIDTDTDIDPDIDTDIDMDIDIDIDIDMDIDTDIDTDTDIDTDIDTDIDIDTDIDIDIDTDTDIDTDIDIDVDIDLPPADTSHQTRSVPSRPYYSLPNHSHERRSVLALAEPPRFHSQAKGKNVRLDAHSRRATRRNSFCNGVTFTNRPIHLYEKVRLKLVAVHHGWSGALRFGFTIHDPSQMSSEEIPKYACPDLVTRPGYWAKALPERFAVRDNILAFWVDRHGRVFYSINDEEPILFHCGIKVSGPLWALIDVYGITHEVQILDSMFAETMSTARLSSARLSTCLPQSNHDSANFNNNELENNQVVAKIANLNLSRVPGLGSDNHIIPCCPGRRQHAQGVPAFLDTDLRFHPTRGPDVTFSQDRMVACTNWQESNRTLVFSDRPLHIGESLFVEVGHLGLPYYGALSFGITSCDPSTLRTNELPADPDFLLDRKEYWVVYRAFPVLNSGDILSFMVLPNGEVHHGVNGASRGMLMCVDTSQSLWVFFTIHGVINQLKILGTVQSSPGTVSPSGSPGGSQYDSDSDVAFSVNRSSSASESSLVTAPSSPLSPPISPVFSPPEPSSSKNGECTVCFDSEVDTVIYTCGHMCLCNTCGLKLKKQLNACCPICRRVIKDVIKIYRP
SIO_010081: NEURL1B
subclass of: SO_0000673
so part of: NEURL1B
location: complement(join(1738344..1738588,1739278..1739403,1740304..1741011,1743654..1744227,1799785..1800017,1833511..1833559))
location: region:1738344-1833559:-1
so has part: feature:1833511-1833559:-1:exon
so has part: feature:1799785-1800017:-1:exon
so has part: feature:1743654-1744227:-1:exon
so has part: feature:1740304-1741011:-1:exon
so has part: feature:1739278-1739403:-1:exon
so has part: feature:1738344-1738588:-1:exon

XP_005053811.1
type: Protein
SIO_000068: ncbiprotein

position:1738344:-1
position: 1738344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1833511-1833559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1799785-1800017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1743654-1744227:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740304-1741011:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1739278-1739403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1738344-1738588:-1:exon

SFXN1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SFXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1874695..2962027
location: region:1874695-2962027:1
so has part: feature:1874695-2962027:1:exon
subclass of: SO_0000010

101806699
type: Gene
SIO_000068: ncbigene

position:1874695:1
position: 1874695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962027:1
position: 2962027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1874695-2962027:1:exon

SFXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SFXN1
product: sideroflexin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005053643.2
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(1874695..1874716,2939444..2939544,2947333..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2962027)
location: region:1874695-2962027:1
so has part: feature:1874695-1874716:1:exon
so has part: feature:2939444-2939544:1:exon
so has part: feature:2947333-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2962027:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1874695-1874716:1:exon

position:1874716:1
position: 1874716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2939444-2939544:1:exon

position:2939444:1
position: 2939444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2939544:1
position: 2939544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2947333-2947507:1:exon

position:2947333:1
position: 2947333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947507:1
position: 2947507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2948110-2948280:1:exon

position:2948110:1
position: 2948110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948280:1
position: 2948280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2949289-2949387:1:exon

position:2949289:1
position: 2949289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949387:1
position: 2949387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2950890-2950965:1:exon

position:2950890:1
position: 2950890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950965:1
position: 2950965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2951511-2951596:1:exon

position:2951511:1
position: 2951511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951596:1
position: 2951596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2952844-2952971:1:exon

position:2952844:1
position: 2952844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952971:1
position: 2952971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2953470-2953519:1:exon

position:2953470:1
position: 2953470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953519:1
position: 2953519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2959218-2959267:1:exon

position:2959218:1
position: 2959218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959267:1
position: 2959267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2959913-2959960:1:exon

position:2959913:1
position: 2959913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959960:1
position: 2959960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2961647-2962027:1:exon

position:2961647:1
position: 2961647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUSP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DUSP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1895500..1898256)
location: region:1895500-1898256:-1
so has part: feature:1895500-1898256:-1:exon
subclass of: SO_0000010

101821078
type: Gene
SIO_000068: ncbigene

position:1895500:-1
position: 1895500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898256:-1
position: 1898256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895500-1898256:-1:exon

DUSP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DUSP1
product: dual specificity phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016301546.1
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(1895500..1896522,1897010..1897229,1897517..1897732,1897774..1898256))
location: region:1895500-1898256:-1
so has part: feature:1897774-1898256:-1:exon
so has part: feature:1897517-1897732:-1:exon
so has part: feature:1897010-1897229:-1:exon
so has part: feature:1895500-1896522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1897774-1898256:-1:exon

position:1897774:-1
position: 1897774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1897517-1897732:-1:exon

position:1897517:-1
position: 1897517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897732:-1
position: 1897732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1897010-1897229:-1:exon

position:1897010:-1
position: 1897010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897229:-1
position: 1897229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1895500-1896522:-1:exon

position:1896522:-1
position: 1896522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUSP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DUSP1
product: dual specificity phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053626.2
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(1895500..1896522,1897010..1897229,1897517..1897712,1897754..1898256))
location: region:1895500-1898256:-1
so has part: feature:1897754-1898256:-1:exon
so has part: feature:1897517-1897712:-1:exon
so has part: feature:1897010-1897229:-1:exon
so has part: feature:1895500-1896522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1897754-1898256:-1:exon

position:1897754:-1
position: 1897754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1897517-1897712:-1:exon

position:1897712:-1
position: 1897712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1897010-1897229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1895500-1896522:-1:exon

DUSP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DUSP1
product: dual specificity phosphatase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053627.2
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(1895502..1896522,1897010..1897229,1897517..1897665,1897803..1898256))
location: region:1895502-1898256:-1
so has part: feature:1897803-1898256:-1:exon
so has part: feature:1897517-1897665:-1:exon
so has part: feature:1897010-1897229:-1:exon
so has part: feature:1895502-1896522:-1:exon

position:1895502:-1
position: 1895502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897803-1898256:-1:exon

position:1897803:-1
position: 1897803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1897517-1897665:-1:exon

position:1897665:-1
position: 1897665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1897010-1897229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1895502-1896522:-1:exon

DUSP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DUSP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 1 isoform X3
translation: MVNLRVCALDCEALRGLLQERASQCLVLDCRSFFSFNAAHIRGSCNVRLSTIVRRRAKGALALEHVVPNEELRARLRQGLFHSVVLLDERSADLEAPKRDSTVLLALGTLCREARGARICFLKGGYEAFSSACSELCTKPAAPAGLSLPLSASPAPGSADSGCSSCGTPLYDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSVKKEGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPNCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHSTSSALNYLQSPITTSPSC
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(1896152..1896522,1897010..1897229,1897517..1897665,1897803..1898172))
location: region:1896152-1898172:-1
so has part: feature:1897803-1898172:-1:exon
so has part: feature:1897517-1897665:-1:exon
so has part: feature:1897010-1897229:-1:exon
so has part: feature:1896152-1896522:-1:exon

XP_005053684.1
type: Protein
SIO_000068: ncbiprotein

position:1896152:-1
position: 1896152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898172:-1
position: 1898172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897803-1898172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1897517-1897665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1897010-1897229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1896152-1896522:-1:exon

DUSP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DUSP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 1 isoform X2
translation: MVNLRVCALDCEALRGLLQERASQCLVLDCRSFFSFNAAHIRGSCNVRLSTIVRRRAKGALALEHVVPNEELRARLRQGLFHSVVLLDERSADLEAPKRDSTVLLALGTLCREARGARICFLKGEWPRRRRGSRAGQPRCSPGRAALTPRSSPPAGGYEAFSSACSELCTKPAAPAGLSLPLSASPAPGSADSGCSSCGTPLYDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSVKKEGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPNCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHSTSSALNYLQSPITTSPSC
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(1896152..1896522,1897010..1897229,1897517..1897732,1897774..1898172))
location: region:1896152-1898172:-1
so has part: feature:1897774-1898172:-1:exon
so has part: feature:1897517-1897732:-1:exon
so has part: feature:1897010-1897229:-1:exon
so has part: feature:1896152-1896522:-1:exon

XP_016157032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1897774-1898172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1897517-1897732:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1897010-1897229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1896152-1896522:-1:exon

DUSP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DUSP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 1 isoform X1
translation: MVNLRVCALDCEALRGLLQERASQCLVLDCRSFFSFNAAHIRGSCNVRLSTIVRRRAKGALALEHVVPNEELRARLRQGLFHSVVLLDERSADLEAPKRDSTVLLALGTLCREARGARICFLKGEWPRRRRGSRAGQPRSSPGRAALTPRSSPPAGGYEAFSSACSELCTKPAAPAGLSLPLSASPAPGSADSGCSSCGTPLYDQGGPVEILPFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSVKKEGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPNCSAEAGSPAMAVLDRGASTTTVFNFPVSIPVHSTSSALNYLQSPITTSPSC
SIO_010081: DUSP1
subclass of: SO_0000673
so part of: DUSP1
location: complement(join(1896152..1896522,1897010..1897229,1897517..1897712,1897754..1898172))
location: region:1896152-1898172:-1
so has part: feature:1897754-1898172:-1:exon
so has part: feature:1897517-1897712:-1:exon
so has part: feature:1897010-1897229:-1:exon
so has part: feature:1896152-1896522:-1:exon

XP_005053683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1897754-1898172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1897517-1897712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1897010-1897229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1896152-1896522:-1:exon

ERGIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ERGIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1943559..1992446
location: region:1943559-1992446:1
so has part: feature:1943559-1992446:1:exon
subclass of: SO_0000010

101810682
type: Gene
SIO_000068: ncbigene

position:1943559:1
position: 1943559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1992446:1
position: 1992446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1943559-1992446:1:exon

ERGIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ERGIC1
product: endoplasmic reticulum-golgi intermediate compartment 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005053753.2
SIO_010081: ERGIC1
subclass of: SO_0000673
so part of: ERGIC1
location: join(1943559..1943568,1946840..1946891,1955728..1955789,1961741..1961813,1971986..1972080,1972728..1972852,1975106..1975210,1978274..1978334,1979389..1979489,1982544..1982666,1989830..1992446)
location: region:1943559-1992446:1
so has part: feature:1943559-1943568:1:exon
so has part: feature:1946840-1946891:1:exon
so has part: feature:1955728-1955789:1:exon
so has part: feature:1961741-1961813:1:exon
so has part: feature:1971986-1972080:1:exon
so has part: feature:1972728-1972852:1:exon
so has part: feature:1975106-1975210:1:exon
so has part: feature:1978274-1978334:1:exon
so has part: feature:1979389-1979489:1:exon
so has part: feature:1982544-1982666:1:exon
so has part: feature:1989830-1992446:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1943559-1943568:1:exon

position:1943568:1
position: 1943568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1946840-1946891:1:exon

position:1946840:1
position: 1946840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1946891:1
position: 1946891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1955728-1955789:1:exon

position:1955728:1
position: 1955728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1955789:1
position: 1955789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1961741-1961813:1:exon

position:1961741:1
position: 1961741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1961813:1
position: 1961813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1971986-1972080:1:exon

position:1971986:1
position: 1971986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1972080:1
position: 1972080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1972728-1972852:1:exon

position:1972728:1
position: 1972728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1972852:1
position: 1972852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1975106-1975210:1:exon

position:1975106:1
position: 1975106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1975210:1
position: 1975210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1978274-1978334:1:exon

position:1978274:1
position: 1978274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1978334:1
position: 1978334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1979389-1979489:1:exon

position:1979389:1
position: 1979389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1979489:1
position: 1979489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1982544-1982666:1:exon

position:1982544:1
position: 1982544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982666:1
position: 1982666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1989830-1992446:1:exon

position:1989830:1
position: 1989830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERGIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ERGIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum-Golgi intermediate compartment protein 1
translation: MEWVQCVTGEILSSICNWIYWFDIYRKVPKDLTQPTYTGAIISVCCCLFILFLFLSELTGFIATEIVNELYVDDPDKDSGGKIEVNLNISLPNLHCELVGLDIQDEMGRHEVGHIDNSMKITLNNGEGCRFEGHFSINKVPGNFHVSTHSATAQPQNPDMTHVIHKLSFGDKLQVHNVHGAFNALEGADKLSSNPLASHDYILKIVPTVYEDMSGKQRYSYQYTVANKEYVAYSHTGRIIPAIWFRYDLSPITVKYTERRQPLYRFITSICAIIGGTFTVAGILDSCIFTASEAWKKIQLGKMQ
SIO_010081: ERGIC1
subclass of: SO_0000673
so part of: ERGIC1
location: join(1943559..1943568,1946840..1946891,1955728..1955789,1961741..1961813,1971986..1972080,1972728..1972852,1975106..1975210,1978274..1978334,1979389..1979489,1982544..1982666,1989830..1989937)
location: region:1943559-1989937:1
so has part: feature:1943559-1943568:1:exon
so has part: feature:1946840-1946891:1:exon
so has part: feature:1955728-1955789:1:exon
so has part: feature:1961741-1961813:1:exon
so has part: feature:1971986-1972080:1:exon
so has part: feature:1972728-1972852:1:exon
so has part: feature:1975106-1975210:1:exon
so has part: feature:1978274-1978334:1:exon
so has part: feature:1979389-1979489:1:exon
so has part: feature:1982544-1982666:1:exon
so has part: feature:1989830-1989937:1:exon

XP_005053810.2
type: Protein
SIO_000068: ncbiprotein

position:1989937:1
position: 1989937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1943559-1943568:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1946840-1946891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1955728-1955789:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1961741-1961813:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1971986-1972080:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1972728-1972852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1975106-1975210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1978274-1978334:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1979389-1979489:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1982544-1982666:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1989830-1989937:1:exon

RPL26L1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RPL26L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1996663..1999914
location: region:1996663-1999914:1
so has part: feature:1996663-1999914:1:exon
subclass of: SO_0000010

101821413
type: Gene
SIO_000068: ncbigene

position:1996663:1
position: 1996663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1999914:1
position: 1999914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1996663-1999914:1:exon

RPL26L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RPL26L1
product: ribosomal protein L26 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005053628.2
SIO_010081: RPL26L1
subclass of: SO_0000673
so part of: RPL26L1
location: join(1996663..1996835,1997695..1997835,1999742..1999914)
location: region:1996663-1999914:1
so has part: feature:1996663-1996835:1:exon
so has part: feature:1997695-1997835:1:exon
so has part: feature:1999742-1999914:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1996663-1996835:1:exon

position:1996835:1
position: 1996835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1997695-1997835:1:exon

position:1997695:1
position: 1997695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1997835:1
position: 1997835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1999742-1999914:1:exon

position:1999742:1
position: 1999742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL26L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RPL26L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L26-like 1
translation: MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVGKEKGKYKEETIEKMQE
SIO_010081: RPL26L1
subclass of: SO_0000673
so part of: RPL26L1
location: join(1996668..1996835,1997695..1997835,1999742..1999870)
location: region:1996668-1999870:1
so has part: feature:1996668-1996835:1:exon
so has part: feature:1997695-1997835:1:exon
so has part: feature:1999742-1999870:1:exon

XP_005053685.1
type: Protein
SIO_000068: ncbiprotein

position:1996668:1
position: 1996668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1999870:1
position: 1999870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1996668-1996835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1997695-1997835:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1999742-1999870:1:exon

ATP6V0E1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ATP6V0E1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2002123..2012045
location: region:2002123-2012045:1
so has part: feature:2002123-2012045:1:exon
subclass of: SO_0000010

101810489
type: Gene
SIO_000068: ncbigene

position:2002123:1
position: 2002123
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2012045:1
position: 2012045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2002123-2012045:1:exon

ATP6V0E1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ATP6V0E1
product: ATPase H+ transporting V0 subunit e1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005053752.1
SIO_010081: ATP6V0E1
subclass of: SO_0000673
so part of: ATP6V0E1
location: join(<2002123..2002184,2003793..2003840,2009176..2009302,2011825..2012045)
location: region:2002123-2012045:1
so has part: feature:2002123-2002184:1:exon
so has part: feature:2003793-2003840:1:exon
so has part: feature:2009176-2009302:1:exon
so has part: feature:2011825-2012045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2002123-2002184:1:exon

position:2002184:1
position: 2002184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2003793-2003840:1:exon

position:2003793:1
position: 2003793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2003840:1
position: 2003840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2009176-2009302:1:exon

position:2009176:1
position: 2009176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2009302:1
position: 2009302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2011825-2012045:1:exon

position:2011825:1
position: 2011825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP6V0E1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ATP6V0E1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit e 1
translation: GVGGVVGGVLPWLVPKGPNRGVINTMLVTCAVCCYLFWLIAILAQLNPLFGPQLSNETIWYLRYHWP
SIO_010081: ATP6V0E1
subclass of: SO_0000673
so part of: ATP6V0E1
location: join(<2002123..2002184,2003793..2003840,2009176..2009269)
location: region:2002123-2009269:1
so has part: feature:2002123-2002184:1:exon
so has part: feature:2003793-2003840:1:exon
so has part: feature:2009176-2009269:1:exon

XP_005053809.1
type: Protein
SIO_000068: ncbiprotein

position:2009269:1
position: 2009269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2002123-2002184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2003793-2003840:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2009176-2009269:1:exon

LOC107603940
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2012179..2014409)
location: region:2012179-2014409:-1
so has part: feature:2012179-2014409:-1:exon
subclass of: SO_0000011

107603940
type: Gene
SIO_000068: ncbigene

position:2012179:-1
position: 2012179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2014409:-1
position: 2014409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2012179-2014409:-1:exon

LOC107603940
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107603940
product: uncharacterized LOC107603940
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001611756.1
SIO_010081: LOC107603940
subclass of: SO_0000673
so part of: LOC107603940
location: complement(join(2012179..2013920,2014314..2014409))
location: region:2012179-2014409:-1
so has part: feature:2014314-2014409:-1:exon
so has part: feature:2012179-2013920:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2014314-2014409:-1:exon

position:2014314:-1
position: 2014314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2012179-2013920:-1:exon

position:2013920:-1
position: 2013920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CREBRF
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2025549..2042374
location: region:2025549-2042374:1
so has part: feature:2025549-2042374:1:exon
subclass of: SO_0000010

101821613
type: Gene
SIO_000068: ncbigene

position:2025549:1
position: 2025549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042374:1
position: 2042374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2025549-2042374:1:exon

CREBRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CREBRF
product: CREB3 regulatory factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053629.1
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(2025549..2025722,2026662..2026787,2027655..2028738,2032772..2032966,2034676..2034865,2035336..2035409,2035793..2035915,2036468..2042374)
location: region:2025549-2042374:1
so has part: feature:2025549-2025722:1:exon
so has part: feature:2026662-2026787:1:exon
so has part: feature:2027655-2028738:1:exon
so has part: feature:2032772-2032966:1:exon
so has part: feature:2034676-2034865:1:exon
so has part: feature:2035336-2035409:1:exon
so has part: feature:2035793-2035915:1:exon
so has part: feature:2036468-2042374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2025549-2025722:1:exon

position:2025722:1
position: 2025722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2026662-2026787:1:exon

position:2026662:1
position: 2026662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026787:1
position: 2026787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2027655-2028738:1:exon

position:2027655:1
position: 2027655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028738:1
position: 2028738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2032772-2032966:1:exon

position:2032772:1
position: 2032772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032966:1
position: 2032966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2034676-2034865:1:exon

position:2034676:1
position: 2034676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2034865:1
position: 2034865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2035336-2035409:1:exon

position:2035336:1
position: 2035336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2035409:1
position: 2035409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2035793-2035915:1:exon

position:2035793:1
position: 2035793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2035915:1
position: 2035915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2036468-2042374:1:exon

position:2036468:1
position: 2036468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CREBRF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CREBRF
product: CREB3 regulatory factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053630.1
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(2025549..2025722,2026662..2026787,2027655..2028738,2034676..2034865,2035336..2035409,2035793..2035915,2036468..2042374)
location: region:2025549-2042374:1
so has part: feature:2025549-2025722:1:exon
so has part: feature:2026662-2026787:1:exon
so has part: feature:2027655-2028738:1:exon
so has part: feature:2034676-2034865:1:exon
so has part: feature:2035336-2035409:1:exon
so has part: feature:2035793-2035915:1:exon
so has part: feature:2036468-2042374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2025549-2025722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2026662-2026787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2027655-2028738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2034676-2034865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2035336-2035409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2035793-2035915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2036468-2042374:1:exon

CREBRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor isoform X1
translation: MPQPSVSGMDPPFGDAFRSHLFSEQTLMSTDVLASSSDPDFMYELDREMDYQQSSRDNLLFMEDCKDLENLESFTDILDKEAAFTSKWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQPVSDSLYYPDLLFSVKQNPLNPLLPGKKMASRAAAPVCSSKNVQAEAALSDCAQKATKAGSQPASSTQIMAKSNVGSSEKVNVHVECKDYVKKAKVKINPVPQSRPVLSQALADAAKENTCYCGAVAKRQERKGLESPHGHSTTPGLPFKETQELLLSPPQESPGLAVGESSLSASASVSDSSQKKEEHNYSLFVTDTLGEQSAKAEPEEEEEDEDDIEDEDHDEGFGSEHELSENDDEEEDYEDDKDDDISDTFSEPGYENDSVEDLKEMTAISSRKRGKRRYFWEYSEQLTPSQQERMLRPSEWSRDTLPSNMYQKNGLHHGKYAAKKSRRTDVEDLTPNPRKLLQIGNELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQVPKDDRGINMEQKLNILIKDTLGLPVAGQTSEFVNQVLEKTAEGDATGGLVGLRIPTAKV
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(2025714..2025722,2026662..2026787,2027655..2028738,2032772..2032966,2034676..2034865,2035336..2035409,2035793..2035915,2036468..2036583)
location: region:2025714-2036583:1
so has part: feature:2025714-2025722:1:exon
so has part: feature:2026662-2026787:1:exon
so has part: feature:2027655-2028738:1:exon
so has part: feature:2032772-2032966:1:exon
so has part: feature:2034676-2034865:1:exon
so has part: feature:2035336-2035409:1:exon
so has part: feature:2035793-2035915:1:exon
so has part: feature:2036468-2036583:1:exon

XP_005053686.1
type: Protein
SIO_000068: ncbiprotein

position:2025714:1
position: 2025714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2036583:1
position: 2036583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2025714-2025722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2026662-2026787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2027655-2028738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2032772-2032966:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2034676-2034865:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2035336-2035409:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2035793-2035915:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2036468-2036583:1:exon

CREBRF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CREBRF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CREB3 regulatory factor isoform X2
translation: MPQPSVSGMDPPFGDAFRSHLFSEQTLMSTDVLASSSDPDFMYELDREMDYQQSSRDNLLFMEDCKDLENLESFTDILDKEAAFTSKWEQWDTYCEDLTKYTKLTSCDIWGTKEVDYLGLDDFSSPYQDEEVISKTPTLAQLNSEDSQPVSDSLYYPDLLFSVKQNPLNPLLPGKKMASRAAAPVCSSKNVQAEAALSDCAQKATKAGSQPASSTQIMAKSNVGSSEKVNVHVECKDYVKKAKVKINPVPQSRPVLSQALADAAKENTCYCGAVAKRQERKGLESPHGHSTTPGLPFKETQELLLSPPQESPGLAVGESSLSASASVSDSSQKKEEHNYSLFVTDTLGEQSAKAEPEEEEEDEDDIEDEDHDEGFGSEHELSENDDEEEDYEDDKDDDISDTFSEPGKYAAKKSRRTDVEDLTPNPRKLLQIGNELRKLNKVISDLTPVSELPLTARPRSRKEKNKLASRACRLKKKAQYEANKVKLWGLNTEYDNLLFVINSIKQEIVNRVQVPKDDRGINMEQKLNILIKDTLGLPVAGQTSEFVNQVLEKTAEGDATGGLVGLRIPTAKV
SIO_010081: CREBRF
subclass of: SO_0000673
so part of: CREBRF
location: join(2025714..2025722,2026662..2026787,2027655..2028738,2034676..2034865,2035336..2035409,2035793..2035915,2036468..2036583)
location: region:2025714-2036583:1
so has part: feature:2025714-2025722:1:exon
so has part: feature:2026662-2026787:1:exon
so has part: feature:2027655-2028738:1:exon
so has part: feature:2034676-2034865:1:exon
so has part: feature:2035336-2035409:1:exon
so has part: feature:2035793-2035915:1:exon
so has part: feature:2036468-2036583:1:exon

XP_005053687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2025714-2025722:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2026662-2026787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2027655-2028738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2034676-2034865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2035336-2035409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2035793-2035915:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2036468-2036583:1:exon

BNIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2044134..2048980
location: region:2044134-2048980:1
so has part: feature:2044134-2048980:1:exon
subclass of: SO_0000010

101810312
type: Gene
SIO_000068: ncbigene

position:2044134:1
position: 2044134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048980:1
position: 2048980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2044134-2048980:1:exon

BNIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BNIP1
product: BCL2/adenovirus E1B 19kDa interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005053751.2
SIO_010081: BNIP1
subclass of: SO_0000673
so part of: BNIP1
location: join(2044134..2044220,2044301..2044393,2044695..2044786,2045572..2045673,2046360..2046478,2048226..2048980)
location: region:2044134-2048980:1
so has part: feature:2044134-2044220:1:exon
so has part: feature:2044301-2044393:1:exon
so has part: feature:2044695-2044786:1:exon
so has part: feature:2045572-2045673:1:exon
so has part: feature:2046360-2046478:1:exon
so has part: feature:2048226-2048980:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2044134-2044220:1:exon

position:2044220:1
position: 2044220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2044301-2044393:1:exon

position:2044301:1
position: 2044301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044393:1
position: 2044393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2044695-2044786:1:exon

position:2044695:1
position: 2044695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044786:1
position: 2044786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2045572-2045673:1:exon

position:2045572:1
position: 2045572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045673:1
position: 2045673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2046360-2046478:1:exon

position:2046360:1
position: 2046360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2046478:1
position: 2046478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2048226-2048980:1:exon

position:2048226:1
position: 2048226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BNIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BNIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein SEC20
translation: MAAVAAAVPLRVCHQEIVKFDLEIKAAVQDIRDCPGPLSALTELNAAVKEKFRQLRGRIQELEQMAKEQDKESEKQALLREVENHKKQMLSNQAAWRKANLACKIAIDNSEKDQLLQGRDVLRQRKTTKESLAESASNITESLMGISRMMSQQVQQSEETVQTLANSSRTILEANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYILKKRLFPFL
SIO_010081: BNIP1
subclass of: SO_0000673
so part of: BNIP1
location: join(2044134..2044220,2044301..2044393,2044695..2044786,2045572..2045673,2046360..2046478,2048226..2048422)
location: region:2044134-2048422:1
so has part: feature:2044134-2044220:1:exon
so has part: feature:2044301-2044393:1:exon
so has part: feature:2044695-2044786:1:exon
so has part: feature:2045572-2045673:1:exon
so has part: feature:2046360-2046478:1:exon
so has part: feature:2048226-2048422:1:exon

XP_005053808.1
type: Protein
SIO_000068: ncbiprotein

position:2048422:1
position: 2048422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2044134-2044220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2044301-2044393:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2044695-2044786:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2045572-2045673:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2046360-2046478:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2048226-2048422:1:exon

NKX2-5
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NKX2-5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2063999..2065942)
location: region:2063999-2065942:-1
so has part: feature:2063999-2065942:-1:exon
subclass of: SO_0000010

101821998
type: Gene
SIO_000068: ncbigene

position:2063999:-1
position: 2063999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2065942:-1
position: 2065942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2063999-2065942:-1:exon

NKX2-5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NKX2-5
product: NK2 homeobox 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005053631.2
SIO_010081: NKX2-5
subclass of: SO_0000673
so part of: NKX2-5
location: complement(join(2063999..2064681,2065361..2065942))
location: region:2063999-2065942:-1
so has part: feature:2065361-2065942:-1:exon
so has part: feature:2063999-2064681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2065361-2065942:-1:exon

position:2065361:-1
position: 2065361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2063999-2064681:-1:exon

position:2064681:-1
position: 2064681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NKX2-5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NKX2-5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-2.5
translation: MFPSPVTSTPFSVKDILNLEQQQQQGGLGSMELASLASPSCMLATFKQEAFAAEPPALPELREELPEPPPGKTTAAFPGSYYVKSYMEMDSAKEAKADKKELCSLHKSLEQEKRDLEDPERPRQRKRRKPRVLFSQAQVYELERRFKQQKYLSAPERDHLANVLKLTSTQVKIWFQNRRYKCKRQRQDQTLEMVGIPPPRRIAVPVLVRDGKPCLGESSPYSSPYNVSINPYSYNAYPAYSNYNSPACNANYNCSYPSMQPMQPSAPANNFMNFSVGDLNSVQTPIPQGNAGISTLHGIRAW
SIO_010081: NKX2-5
subclass of: SO_0000673
so part of: NKX2-5
location: complement(join(2064074..2064681,2065361..2065661))
location: region:2064074-2065661:-1
so has part: feature:2065361-2065661:-1:exon
so has part: feature:2064074-2064681:-1:exon

XP_005053688.1
type: Protein
SIO_000068: ncbiprotein

position:2064074:-1
position: 2064074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2065661:-1
position: 2065661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2065361-2065661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2064074-2064681:-1:exon

NKX2-5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: NKX2-5
product: NK2 homeobox 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001611754.1
SIO_010081: NKX2-5
so part of: NKX2-5
location: complement(join(2064758..2064784,2065361..2065441))
location: region:2064758-2065441:-1
so has part: feature:2065361-2065441:-1:exon
so has part: feature:2064758-2064784:-1:exon

position:2064758:-1
position: 2064758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2065441:-1
position: 2065441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2065361-2065441:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2064758-2064784:-1:exon

position:2064784:-1
position: 2064784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STC2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: STC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2095775..2104461)
location: region:2095775-2104461:-1
so has part: feature:2095775-2104461:-1:exon
subclass of: SO_0000010

101822206
type: Gene
SIO_000068: ncbigene

position:2095775:-1
position: 2095775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2104461:-1
position: 2104461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2095775-2104461:-1:exon

STC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: STC2
product: stanniocalcin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005053632.1
SIO_010081: STC2
subclass of: SO_0000673
so part of: STC2
location: complement(join(2095775..2097592,2101143..2101354,2104027..2104461))
location: region:2095775-2104461:-1
so has part: feature:2104027-2104461:-1:exon
so has part: feature:2101143-2101354:-1:exon
so has part: feature:2095775-2097592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2104027-2104461:-1:exon

position:2104027:-1
position: 2104027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2101143-2101354:-1:exon

position:2101143:-1
position: 2101143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2101354:-1
position: 2101354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2095775-2097592:-1:exon

position:2097592:-1
position: 2097592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: STC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stanniocalcin-2
translation: MLVVAEIQHCLVNAGDVGCGVFECFENNSCEIRGLHEICMTFLHNAGKFDAQGKSFIKDALKCKAHALRHKFSCISRKCPAIKEMVFQLQRECYLKHDLCSAAKENVQVIVEMIHFKDLLQHEPYVDLVNILLTCGEEVKKAITRSVQAQCEQNWGSLCSILSFCSSAAHGDAAPGAERKAGEGGRAAAGRGDMAAQAEPEHRESSRAAKAERGAKGHSNARAKAGGHGPKAAHGILDRADELSDFSDVRR
SIO_010081: STC2
subclass of: SO_0000673
so part of: STC2
location: complement(join(2097205..2097592,2101143..2101354,2104027..2104182))
location: region:2097205-2104182:-1
so has part: feature:2104027-2104182:-1:exon
so has part: feature:2101143-2101354:-1:exon
so has part: feature:2097205-2097592:-1:exon

XP_005053689.1
type: Protein
SIO_000068: ncbiprotein

position:2097205:-1
position: 2097205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2104182:-1
position: 2104182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2104027-2104182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2101143-2101354:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2097205-2097592:-1:exon

BOD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2209210..2215005)
location: region:2209210-2215005:-1
so has part: feature:2209210-2215005:-1:exon
subclass of: SO_0000010

101809928
type: Gene
SIO_000068: ncbigene

position:2209210:-1
position: 2209210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2215005:-1
position: 2215005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2209210-2215005:-1:exon

BOD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BOD1
product: biorientation of chromosomes in cell division 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005053750.1
SIO_010081: BOD1
subclass of: SO_0000673
so part of: BOD1
location: complement(join(2209210..2210038,2211210..2211410,2213135..2213259,2214260..2214382,2214934..2215005))
location: region:2209210-2215005:-1
so has part: feature:2214934-2215005:-1:exon
so has part: feature:2214260-2214382:-1:exon
so has part: feature:2213135-2213259:-1:exon
so has part: feature:2211210-2211410:-1:exon
so has part: feature:2209210-2210038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2214934-2215005:-1:exon

position:2214934:-1
position: 2214934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2214260-2214382:-1:exon

position:2214260:-1
position: 2214260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2214382:-1
position: 2214382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2213135-2213259:-1:exon

position:2213135:-1
position: 2213135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2213259:-1
position: 2213259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2211210-2211410:-1:exon

position:2211210:-1
position: 2211210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2211410:-1
position: 2211410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2209210-2210038:-1:exon

position:2210038:-1
position: 2210038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BOD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BOD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: biorientation of chromosomes in cell division protein 1
translation: MHGDSNAPAFPLPLWAAPRCTQGLPHPGSLPPGDPQLIAIIVEQLKSRGLFDGFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPAMNKNQLRNGLRQSVIQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFLAAQKKEENVPAPPPEPETKDPPAPSQDAS
SIO_010081: BOD1
subclass of: SO_0000673
so part of: BOD1
location: complement(join(2211212..2211410,2213135..2213259,2214260..2214382,2214934..2215005))
location: region:2211212-2215005:-1
so has part: feature:2214934-2215005:-1:exon
so has part: feature:2214260-2214382:-1:exon
so has part: feature:2213135-2213259:-1:exon
so has part: feature:2211212-2211410:-1:exon

XP_005053807.1
type: Protein
SIO_000068: ncbiprotein

position:2211212:-1
position: 2211212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2214934-2215005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2214260-2214382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2213135-2213259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2211212-2211410:-1:exon

CPEB4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2309520..2345665
location: region:2309520-2345665:1
so has part: feature:2309520-2345665:1:exon
subclass of: SO_0000010

101805750
type: Gene
SIO_000068: ncbigene

position:2309520:1
position: 2309520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2345665:1
position: 2345665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2309520-2345665:1:exon

CPEB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CPEB4
product: cytoplasmic polyadenylation element binding protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053634.2
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(2309520..2311974,2320685..2320766,2336802..2336975,2338659..2338748,2339206..2339324,2340147..2340261,2340394..2340575,2345115..2345665)
location: region:2309520-2345665:1
so has part: feature:2309520-2311974:1:exon
so has part: feature:2320685-2320766:1:exon
so has part: feature:2336802-2336975:1:exon
so has part: feature:2338659-2338748:1:exon
so has part: feature:2339206-2339324:1:exon
so has part: feature:2340147-2340261:1:exon
so has part: feature:2340394-2340575:1:exon
so has part: feature:2345115-2345665:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2309520-2311974:1:exon

position:2311974:1
position: 2311974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2320685-2320766:1:exon

position:2320685:1
position: 2320685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2320766:1
position: 2320766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2336802-2336975:1:exon

position:2336802:1
position: 2336802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2336975:1
position: 2336975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2338659-2338748:1:exon

position:2338659:1
position: 2338659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2338748:1
position: 2338748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2339206-2339324:1:exon

position:2339206:1
position: 2339206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339324:1
position: 2339324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2340147-2340261:1:exon

position:2340147:1
position: 2340147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340261:1
position: 2340261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2340394-2340575:1:exon

position:2340394:1
position: 2340394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340575:1
position: 2340575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2345115-2345665:1:exon

position:2345115:1
position: 2345115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPEB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CPEB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 4
translation: MGDYGFGVLVQNNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPAAHNIQDEILGSEKSKTQQQEKQESLEKQQLSPGQSQEAGMLSEPEKAKTEENQGDNSSENGSGKEKIRIESPVLTGFDYQEASGLGTSTQPLTSTASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPTASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHNQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMDDSLNRADNIFPFQDRTRTFDMHSLENSLIDIMRAENDSLKGQSSLFPMEDGFLDDGRGDQSLHSGLGSPHCFSHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN
SIO_010081: CPEB4
subclass of: SO_0000673
so part of: CPEB4
location: join(2310853..2311974,2320685..2320766,2336802..2336975,2338659..2338748,2339206..2339324,2340147..2340261,2340394..2340575,2345115..2345342)
location: region:2310853-2345342:1
so has part: feature:2310853-2311974:1:exon
so has part: feature:2320685-2320766:1:exon
so has part: feature:2336802-2336975:1:exon
so has part: feature:2338659-2338748:1:exon
so has part: feature:2339206-2339324:1:exon
so has part: feature:2340147-2340261:1:exon
so has part: feature:2340394-2340575:1:exon
so has part: feature:2345115-2345342:1:exon

XP_005053691.1
type: Protein
SIO_000068: ncbiprotein

position:2310853:1
position: 2310853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2345342:1
position: 2345342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2310853-2311974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2320685-2320766:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2336802-2336975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2338659-2338748:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2339206-2339324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2340147-2340261:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2340394-2340575:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2345115-2345342:1:exon

LOC101806183
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101806183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2374798..2408307
location: region:2374798-2408307:1
so has part: feature:2374798-2408307:1:exon
subclass of: SO_0000010

101806183
type: Gene
SIO_000068: ncbigene

position:2374798:1
position: 2374798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2408307:1
position: 2408307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2374798-2408307:1:exon

LOC101806183
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101806183
product: neuron-specific protein family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005053636.1
SIO_010081: LOC101806183
subclass of: SO_0000673
so part of: LOC101806183
location: join(2374798..2374891,2375802..2375952,2389446..2389565,2404864..2404974,2406476..2408307)
location: region:2374798-2408307:1
so has part: feature:2374798-2374891:1:exon
so has part: feature:2375802-2375952:1:exon
so has part: feature:2389446-2389565:1:exon
so has part: feature:2404864-2404974:1:exon
so has part: feature:2406476-2408307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2374798-2374891:1:exon

position:2374891:1
position: 2374891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2375802-2375952:1:exon

position:2375802:1
position: 2375802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2375952:1
position: 2375952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2389446-2389565:1:exon

position:2389446:1
position: 2389446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389565:1
position: 2389565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2404864-2404974:1:exon

position:2404864:1
position: 2404864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404974:1
position: 2404974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2406476-2408307:1:exon

position:2406476:1
position: 2406476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101806183
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101806183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuron-specific protein family member 2
translation: MVKLGSNLNDKNNKPPSNEDGFQTVPLITPLEVNHLQFPAPEKVIVKTRTEYQPDQKNKGKLRVPKIAEFTVSFTDGVTERLKVTILISLALAFLACIVFLVVYKAFTYDHSCPDGFVYKHKRCIPASLDAYYSAQDSNSRGRFYTVISHYSMAKQTSSRAVSPWLPSGSASHDSKAAKTDGH
SIO_010081: LOC101806183
subclass of: SO_0000673
so part of: LOC101806183
location: join(2375824..2375952,2389446..2389565,2404864..2404974,2406476..2406667)
location: region:2375824-2406667:1
so has part: feature:2375824-2375952:1:exon
so has part: feature:2389446-2389565:1:exon
so has part: feature:2404864-2404974:1:exon
so has part: feature:2406476-2406667:1:exon

XP_005053693.1
type: Protein
SIO_000068: ncbiprotein

position:2375824:1
position: 2375824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2406667:1
position: 2406667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2375824-2375952:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2389446-2389565:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2404864-2404974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2406476-2406667:1:exon

LOC101809749
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101809749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2434056..2435254)
location: region:2434056-2435254:-1
so has part: feature:2434056-2435254:-1:exon
subclass of: SO_0000010

101809749
type: Gene
SIO_000068: ncbigene

position:2434056:-1
position: 2434056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2435254:-1
position: 2435254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2434056-2435254:-1:exon

LOC101809749
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101809749
product: uncharacterized LOC101809749
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005053749.1
SIO_010081: LOC101809749
subclass of: SO_0000673
so part of: LOC101809749
location: complement(join(2434056..2434118,2434216..2434962,2434997..2435254))
location: region:2434056-2435254:-1
so has part: feature:2434997-2435254:-1:exon
so has part: feature:2434216-2434962:-1:exon
so has part: feature:2434056-2434118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2434997-2435254:-1:exon

position:2434997:-1
position: 2434997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2434216-2434962:-1:exon

position:2434216:-1
position: 2434216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2434962:-1
position: 2434962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2434056-2434118:-1:exon

position:2434118:-1
position: 2434118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101809749
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101809749
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101809749
translation: MGKRCGRAGLGWKSSQFPWQELSRAEKLKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGSEREIRKFGGRRAEKVKRQGGTKREIRKFGGRRAEKVKRQGGSEREIRNFGGRRRDPNHRCTPEGNEKRGRVEL
SIO_010081: LOC101809749
subclass of: SO_0000673
so part of: LOC101809749
location: complement(join(2434056..2434118,2434216..2434962,2434997..2435203))
location: region:2434056-2435203:-1
so has part: feature:2434997-2435203:-1:exon
so has part: feature:2434216-2434962:-1:exon
so has part: feature:2434056-2434118:-1:exon

XP_005053806.1
type: Protein
SIO_000068: ncbiprotein

position:2435203:-1
position: 2435203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2434997-2435203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2434216-2434962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2434056-2434118:-1:exon

MSX2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MSX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2678270..2687351
location: region:2678270-2687351:1
so has part: feature:2678270-2687351:1:exon
subclass of: SO_0000010

101809554
type: Gene
SIO_000068: ncbigene

position:2678270:1
position: 2678270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2687351:1
position: 2687351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2678270-2687351:1:exon

MSX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MSX2
product: msh homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005053748.1
SIO_010081: MSX2
subclass of: SO_0000673
so part of: MSX2
location: join(2678270..2678453,2686707..2687351)
location: region:2678270-2687351:1
so has part: feature:2678270-2678453:1:exon
so has part: feature:2686707-2687351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2678270-2678453:1:exon

position:2678453:1
position: 2678453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2686707-2687351:1:exon

position:2686707:1
position: 2686707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MSX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein MSX-2
translation: MLRKFVAGMLLRLDGYRSEDAAAVPARHLPPPPGWEKGGEGGPGAAWSPGEAEGEAELAGTEPASPFLAGHLSPTACTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPSGFSLPFPINSPIQAASLYGTSYPFHRPVLPIPPVGLYATPVGYSMYHLS
SIO_010081: MSX2
subclass of: SO_0000673
so part of: MSX2
location: join(2678270..2678453,2686707..2687155)
location: region:2678270-2687155:1
so has part: feature:2678270-2678453:1:exon
so has part: feature:2686707-2687155:1:exon

XP_005053805.1
type: Protein
SIO_000068: ncbiprotein

position:2687155:1
position: 2687155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2678270-2678453:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2686707-2687155:1:exon

LOC107603939
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2918109..2920326)
location: region:2918109-2920326:-1
so has part: feature:2918109-2920326:-1:exon
subclass of: SO_0000011

107603939
type: Gene
SIO_000068: ncbigene

position:2918109:-1
position: 2918109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2920326:-1
position: 2920326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2918109-2920326:-1:exon

LOC107603939
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107603939
product: uncharacterized LOC107603939
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001611755.1
SIO_010081: LOC107603939
subclass of: SO_0000673
so part of: LOC107603939
location: complement(join(2918109..2918246,2919290..2919399,2920262..2920326))
location: region:2918109-2920326:-1
so has part: feature:2920262-2920326:-1:exon
so has part: feature:2919290-2919399:-1:exon
so has part: feature:2918109-2918246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2920262-2920326:-1:exon

position:2920262:-1
position: 2920262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2919290-2919399:-1:exon

position:2919290:-1
position: 2919290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2919399:-1
position: 2919399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2918109-2918246:-1:exon

position:2918246:-1
position: 2918246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SFXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SFXN1
product: sideroflexin 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016301548.1
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2921034..2921130,2937854..2937940,2939444..2939544,2946301..2946385,2947333..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2962027)
location: region:2921034-2962027:1
so has part: feature:2921034-2921130:1:exon
so has part: feature:2937854-2937940:1:exon
so has part: feature:2939444-2939544:1:exon
so has part: feature:2946301-2946385:1:exon
so has part: feature:2947333-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2962027:1:exon

position:2921034:1
position: 2921034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2921034-2921130:1:exon

position:2921130:1
position: 2921130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2937854-2937940:1:exon

position:2937854:1
position: 2937854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937940:1
position: 2937940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2939444-2939544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2946301-2946385:1:exon

position:2946301:1
position: 2946301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2946385:1
position: 2946385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2947333-2947507:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2961647-2962027:1:exon

SFXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SFXN1
product: sideroflexin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005053640.2
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2921036..2921130,2937854..2937940,2939444..2939544,2947333..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2962027)
location: region:2921036-2962027:1
so has part: feature:2921036-2921130:1:exon
so has part: feature:2937854-2937940:1:exon
so has part: feature:2939444-2939544:1:exon
so has part: feature:2947333-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2962027:1:exon

position:2921036:1
position: 2921036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2921036-2921130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2937854-2937940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2939444-2939544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2947333-2947507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2961647-2962027:1:exon

DRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2923812..2926551)
location: region:2923812-2926551:-1
so has part: feature:2923812-2926551:-1:exon
subclass of: SO_0000010

101806372
type: Gene
SIO_000068: ncbigene

position:2923812:-1
position: 2923812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2926551:-1
position: 2926551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2923812-2926551:-1:exon

DRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DRD1
product: dopamine receptor D1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005053638.2
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(join(2923812..2925723,2926437..2926551))
location: region:2923812-2926551:-1
so has part: feature:2926437-2926551:-1:exon
so has part: feature:2923812-2925723:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2926437-2926551:-1:exon

position:2926437:-1
position: 2926437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2923812-2925723:-1:exon

position:2925723:-1
position: 2925723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DRD1
product: dopamine receptor D1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005053637.2
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(join(2923812..2925723,2926024..2926429))
location: region:2923812-2926429:-1
so has part: feature:2926024-2926429:-1:exon
so has part: feature:2923812-2925723:-1:exon

position:2926429:-1
position: 2926429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2926024-2926429:-1:exon

position:2926024:-1
position: 2926024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2923812-2925723:-1:exon

DRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D(1A) dopamine receptor
translation: MTWNDTTMDGEGLLVERDSSSFRILTGCFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFIMISVAWTLSVLISFIPVQLNWHKATTTSFLDFNASLQGVSMDNCDSSLNRMYAISSSLISFYIPVAIMIVTYTRIYRIAQKQIRRISALERAAVHAKNCQNPGGNRSSMDCQQPESNFKMSFKRETKVLKTLSVIMGVFVCCWLPFFVLNCMIPFCEPTQPSKGAEAFCINSTTFDVFIWFGWANSSLNPIIYAFNADFRKAFSSLLGCYRLCPVSGNAIETVSINNNGAVVFSSQHEPKGSSPKESNLVYLIPHSIICPEEEPLKKEDEGELAKTLEKMSPALSGILDYEADVSLEKINPITQNGQHKT
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(2924357..2925715)
location: region:2924357-2925715:-1
so has part: feature:2924357-2925715:-1:exon

XP_005053694.1
type: Protein
SIO_000068: ncbiprotein

position:2924357:-1
position: 2924357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2925715:-1
position: 2925715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2924357-2925715:-1:exon

DRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D(1A) dopamine receptor
translation: MTWNDTTMDGEGLLVERDSSSFRILTGCFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFIMISVAWTLSVLISFIPVQLNWHKATTTSFLDFNASLQGVSMDNCDSSLNRMYAISSSLISFYIPVAIMIVTYTRIYRIAQKQIRRISALERAAVHAKNCQNPGGNRSSMDCQQPESNFKMSFKRETKVLKTLSVIMGVFVCCWLPFFVLNCMIPFCEPTQPSKGAEAFCINSTTFDVFIWFGWANSSLNPIIYAFNADFRKAFSSLLGCYRLCPVSGNAIETVSINNNGAVVFSSQHEPKGSSPKESNLVYLIPHSIICPEEEPLKKEDEGELAKTLEKMSPALSGILDYEADVSLEKINPITQNGQHKT
SIO_010081: DRD1
subclass of: SO_0000673
so part of: DRD1
location: complement(2924357..2925715)
location: region:2924357-2925715:-1
so has part: feature:2924357-2925715:-1:exon

XP_005053695.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2924357-2925715:-1:exon

SFXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SFXN1
product: sideroflexin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005053639.1
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2927415..2927492,2937854..2937940,2939444..2939544,2947333..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2962027)
location: region:2927415-2962027:1
so has part: feature:2927415-2927492:1:exon
so has part: feature:2937854-2937940:1:exon
so has part: feature:2939444-2939544:1:exon
so has part: feature:2947333-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2962027:1:exon

position:2927415:1
position: 2927415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2927415-2927492:1:exon

position:2927492:1
position: 2927492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2937854-2937940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2939444-2939544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2947333-2947507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2961647-2962027:1:exon

SFXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SFXN1
product: sideroflexin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005053644.2
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2938843..2938881,2939444..2939544,2947333..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2962027)
location: region:2938843-2962027:1
so has part: feature:2938843-2938881:1:exon
so has part: feature:2939444-2939544:1:exon
so has part: feature:2947333-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2962027:1:exon

position:2938843:1
position: 2938843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2938843-2938881:1:exon

position:2938881:1
position: 2938881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2939444-2939544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2947333-2947507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2961647-2962027:1:exon

SFXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SFXN1
product: sideroflexin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005053642.2
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2938916..2939057,2939444..2939544,2947333..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2962027)
location: region:2938916-2962027:1
so has part: feature:2938916-2939057:1:exon
so has part: feature:2939444-2939544:1:exon
so has part: feature:2947333-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2962027:1:exon

position:2938916:1
position: 2938916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2938916-2939057:1:exon

position:2939057:1
position: 2939057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2939444-2939544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2947333-2947507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2961647-2962027:1:exon

SFXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SFXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sideroflexin-1
translation: MAPDIPLDINIKEPRWDQSTFVGRANHFFTVTDPRNILLSNASLENARKIVHDYRQGIVAPGLTEDELWRAKYIYDSAFHPDTGEKMFVIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWVNQSFNAVVNYTNRSGDAPITVSQLGTAYVSATTGAVATALGLNLLAKRVSPLVGRFVPFAAVASANCINIPLMRQRELKFGIPVTDEDGNRLGDSSKAAQQAIAQVVVSRILMASPGMAIPPFIMNTLEKKAFLKKFPWMSAPIQVGLVGICLVFATPLCCALFPQKSSMAVSRLEPDLQARIKENSPGLERVFFNKGL
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2947344..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2961743)
location: region:2947344-2961743:1
so has part: feature:2947344-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2961743:1:exon

XP_016157034.1
type: Protein
SIO_000068: ncbiprotein

position:2947344:1
position: 2947344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2961743:1
position: 2961743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2947344-2947507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2961647-2961743:1:exon

SFXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SFXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sideroflexin-1
translation: MAPDIPLDINIKEPRWDQSTFVGRANHFFTVTDPRNILLSNASLENARKIVHDYRQGIVAPGLTEDELWRAKYIYDSAFHPDTGEKMFVIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWVNQSFNAVVNYTNRSGDAPITVSQLGTAYVSATTGAVATALGLNLLAKRVSPLVGRFVPFAAVASANCINIPLMRQRELKFGIPVTDEDGNRLGDSSKAAQQAIAQVVVSRILMASPGMAIPPFIMNTLEKKAFLKKFPWMSAPIQVGLVGICLVFATPLCCALFPQKSSMAVSRLEPDLQARIKENSPGLERVFFNKGL
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2947344..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2961743)
location: region:2947344-2961743:1
so has part: feature:2947344-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2961743:1:exon

XP_005053696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2947344-2947507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2961647-2961743:1:exon

SFXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SFXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sideroflexin-1
translation: MAPDIPLDINIKEPRWDQSTFVGRANHFFTVTDPRNILLSNASLENARKIVHDYRQGIVAPGLTEDELWRAKYIYDSAFHPDTGEKMFVIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWVNQSFNAVVNYTNRSGDAPITVSQLGTAYVSATTGAVATALGLNLLAKRVSPLVGRFVPFAAVASANCINIPLMRQRELKFGIPVTDEDGNRLGDSSKAAQQAIAQVVVSRILMASPGMAIPPFIMNTLEKKAFLKKFPWMSAPIQVGLVGICLVFATPLCCALFPQKSSMAVSRLEPDLQARIKENSPGLERVFFNKGL
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2947344..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2961743)
location: region:2947344-2961743:1
so has part: feature:2947344-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2961743:1:exon

XP_005053697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2947344-2947507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2961647-2961743:1:exon

SFXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SFXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sideroflexin-1
translation: MAPDIPLDINIKEPRWDQSTFVGRANHFFTVTDPRNILLSNASLENARKIVHDYRQGIVAPGLTEDELWRAKYIYDSAFHPDTGEKMFVIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWVNQSFNAVVNYTNRSGDAPITVSQLGTAYVSATTGAVATALGLNLLAKRVSPLVGRFVPFAAVASANCINIPLMRQRELKFGIPVTDEDGNRLGDSSKAAQQAIAQVVVSRILMASPGMAIPPFIMNTLEKKAFLKKFPWMSAPIQVGLVGICLVFATPLCCALFPQKSSMAVSRLEPDLQARIKENSPGLERVFFNKGL
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2947344..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2961743)
location: region:2947344-2961743:1
so has part: feature:2947344-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2961743:1:exon

XP_005053699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2947344-2947507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2961647-2961743:1:exon

SFXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SFXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sideroflexin-1
translation: MAPDIPLDINIKEPRWDQSTFVGRANHFFTVTDPRNILLSNASLENARKIVHDYRQGIVAPGLTEDELWRAKYIYDSAFHPDTGEKMFVIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWVNQSFNAVVNYTNRSGDAPITVSQLGTAYVSATTGAVATALGLNLLAKRVSPLVGRFVPFAAVASANCINIPLMRQRELKFGIPVTDEDGNRLGDSSKAAQQAIAQVVVSRILMASPGMAIPPFIMNTLEKKAFLKKFPWMSAPIQVGLVGICLVFATPLCCALFPQKSSMAVSRLEPDLQARIKENSPGLERVFFNKGL
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2947344..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2961743)
location: region:2947344-2961743:1
so has part: feature:2947344-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2961743:1:exon

XP_005053700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2947344-2947507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2961647-2961743:1:exon

SFXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SFXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sideroflexin-1
translation: MAPDIPLDINIKEPRWDQSTFVGRANHFFTVTDPRNILLSNASLENARKIVHDYRQGIVAPGLTEDELWRAKYIYDSAFHPDTGEKMFVIGRMSAQVPMNMTITGCMMTFYRTTPAVLFWQWVNQSFNAVVNYTNRSGDAPITVSQLGTAYVSATTGAVATALGLNLLAKRVSPLVGRFVPFAAVASANCINIPLMRQRELKFGIPVTDEDGNRLGDSSKAAQQAIAQVVVSRILMASPGMAIPPFIMNTLEKKAFLKKFPWMSAPIQVGLVGICLVFATPLCCALFPQKSSMAVSRLEPDLQARIKENSPGLERVFFNKGL
SIO_010081: SFXN1
subclass of: SO_0000673
so part of: SFXN1
location: join(2947344..2947507,2948110..2948280,2949289..2949387,2950890..2950965,2951511..2951596,2952844..2952971,2953470..2953519,2959218..2959267,2959913..2959960,2961647..2961743)
location: region:2947344-2961743:1
so has part: feature:2947344-2947507:1:exon
so has part: feature:2948110-2948280:1:exon
so has part: feature:2949289-2949387:1:exon
so has part: feature:2950890-2950965:1:exon
so has part: feature:2951511-2951596:1:exon
so has part: feature:2952844-2952971:1:exon
so has part: feature:2953470-2953519:1:exon
so has part: feature:2959218-2959267:1:exon
so has part: feature:2959913-2959960:1:exon
so has part: feature:2961647-2961743:1:exon

XP_005053701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2947344-2947507:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2948110-2948280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2949289-2949387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2950890-2950965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2951511-2951596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2952844-2952971:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2953470-2953519:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2959218-2959267:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2959913-2959960:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2961647-2961743:1:exon

KIF20A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: KIF20A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2962079..2971115)
location: region:2962079-2971115:-1
so has part: feature:2962079-2971115:-1:exon
subclass of: SO_0000010

101807651
type: Gene
SIO_000068: ncbigene

position:2962079:-1
position: 2962079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2971115:-1
position: 2971115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2962079-2971115:-1:exon

KIF20A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KIF20A
product: kinesin family member 20A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005053646.2
SIO_010081: KIF20A
subclass of: SO_0000673
so part of: KIF20A
location: complement(join(2962079..2962366,2963221..2963358,2963623..2963714,2964092..2964299,2964962..2965064,2965170..2965309,2965858..2966022,2966282..2966447,2966525..2966668,2967186..2967257,2967353..2967464,2967699..2967899,2968620..2968764,2968853..2969040,2969135..2969273,2969712..2969831,2969948..2970037,2970474..2970646,2971052..2971115))
location: region:2962079-2971115:-1
so has part: feature:2971052-2971115:-1:exon
so has part: feature:2970474-2970646:-1:exon
so has part: feature:2969948-2970037:-1:exon
so has part: feature:2969712-2969831:-1:exon
so has part: feature:2969135-2969273:-1:exon
so has part: feature:2968853-2969040:-1:exon
so has part: feature:2968620-2968764:-1:exon
so has part: feature:2967699-2967899:-1:exon
so has part: feature:2967353-2967464:-1:exon
so has part: feature:2967186-2967257:-1:exon
so has part: feature:2966525-2966668:-1:exon
so has part: feature:2966282-2966447:-1:exon
so has part: feature:2965858-2966022:-1:exon
so has part: feature:2965170-2965309:-1:exon
so has part: feature:2964962-2965064:-1:exon
so has part: feature:2964092-2964299:-1:exon
so has part: feature:2963623-2963714:-1:exon
so has part: feature:2963221-2963358:-1:exon
so has part: feature:2962079-2962366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2971052-2971115:-1:exon

position:2971052:-1
position: 2971052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2970474-2970646:-1:exon

position:2970474:-1
position: 2970474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970646:-1
position: 2970646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2969948-2970037:-1:exon

position:2969948:-1
position: 2969948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970037:-1
position: 2970037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2969712-2969831:-1:exon

position:2969712:-1
position: 2969712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969831:-1
position: 2969831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2969135-2969273:-1:exon

position:2969135:-1
position: 2969135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969273:-1
position: 2969273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2968853-2969040:-1:exon

position:2968853:-1
position: 2968853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2969040:-1
position: 2969040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2968620-2968764:-1:exon

position:2968620:-1
position: 2968620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2968764:-1
position: 2968764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2967699-2967899:-1:exon

position:2967699:-1
position: 2967699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2967899:-1
position: 2967899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2967353-2967464:-1:exon

position:2967353:-1
position: 2967353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2967464:-1
position: 2967464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2967186-2967257:-1:exon

position:2967186:-1
position: 2967186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2967257:-1
position: 2967257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2966525-2966668:-1:exon

position:2966525:-1
position: 2966525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966668:-1
position: 2966668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2966282-2966447:-1:exon

position:2966282:-1
position: 2966282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966447:-1
position: 2966447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2965858-2966022:-1:exon

position:2965858:-1
position: 2965858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966022:-1
position: 2966022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2965170-2965309:-1:exon

position:2965170:-1
position: 2965170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2965309:-1
position: 2965309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2964962-2965064:-1:exon

position:2964962:-1
position: 2964962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2965064:-1
position: 2965064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2964092-2964299:-1:exon

position:2964092:-1
position: 2964092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2964299:-1
position: 2964299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2963623-2963714:-1:exon

position:2963623:-1
position: 2963623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2963714:-1
position: 2963714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2963221-2963358:-1:exon

position:2963221:-1
position: 2963221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2963358:-1
position: 2963358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2962079-2962366:-1:exon

position:2962366:-1
position: 2962366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIF20A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KIF20A
product: kinesin family member 20A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005053647.2
SIO_010081: KIF20A
subclass of: SO_0000673
so part of: KIF20A
location: complement(join(2962079..2962366,2963221..2963358,2963623..2963714,2964092..2964299,2964962..2965064,2965170..2965309,2965858..2966022,2966282..2966447,2966525..2966668,2967186..2967257,2967353..2967464,2967699..2967899,2968620..2968764,2968853..2969040,2969135..2969273,2969712..2969831,2969948..2970037,2970474..2970646,2971020..2971097))
location: region:2962079-2971097:-1
so has part: feature:2971020-2971097:-1:exon
so has part: feature:2970474-2970646:-1:exon
so has part: feature:2969948-2970037:-1:exon
so has part: feature:2969712-2969831:-1:exon
so has part: feature:2969135-2969273:-1:exon
so has part: feature:2968853-2969040:-1:exon
so has part: feature:2968620-2968764:-1:exon
so has part: feature:2967699-2967899:-1:exon
so has part: feature:2967353-2967464:-1:exon
so has part: feature:2967186-2967257:-1:exon
so has part: feature:2966525-2966668:-1:exon
so has part: feature:2966282-2966447:-1:exon
so has part: feature:2965858-2966022:-1:exon
so has part: feature:2965170-2965309:-1:exon
so has part: feature:2964962-2965064:-1:exon
so has part: feature:2964092-2964299:-1:exon
so has part: feature:2963623-2963714:-1:exon
so has part: feature:2963221-2963358:-1:exon
so has part: feature:2962079-2962366:-1:exon

position:2971097:-1
position: 2971097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971020-2971097:-1:exon

position:2971020:-1
position: 2971020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2970474-2970646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2969948-2970037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2969712-2969831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2969135-2969273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2968853-2969040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2968620-2968764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2967699-2967899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2967353-2967464:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2967186-2967257:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2966525-2966668:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2966282-2966447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2965858-2966022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2965170-2965309:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2964962-2965064:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964092-2964299:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2963623-2963714:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2963221-2963358:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2962079-2962366:-1:exon

KIF20A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KIF20A
product: kinesin family member 20A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005053648.2
SIO_010081: KIF20A
subclass of: SO_0000673
so part of: KIF20A
location: complement(join(2962079..2962366,2963221..2963358,2963623..2963714,2964092..2964299,2964962..2965064,2965170..2965309,2965858..2966022,2966282..2966447,2966525..2966668,2967186..2967257,2967353..2967464,2967699..2967899,2968620..2968764,2968853..2969040,2969135..2969273,2969712..2969831,2969948..2970037,2970474..2970646,2970982..2971000))
location: region:2962079-2971000:-1
so has part: feature:2970982-2971000:-1:exon
so has part: feature:2970474-2970646:-1:exon
so has part: feature:2969948-2970037:-1:exon
so has part: feature:2969712-2969831:-1:exon
so has part: feature:2969135-2969273:-1:exon
so has part: feature:2968853-2969040:-1:exon
so has part: feature:2968620-2968764:-1:exon
so has part: feature:2967699-2967899:-1:exon
so has part: feature:2967353-2967464:-1:exon
so has part: feature:2967186-2967257:-1:exon
so has part: feature:2966525-2966668:-1:exon
so has part: feature:2966282-2966447:-1:exon
so has part: feature:2965858-2966022:-1:exon
so has part: feature:2965170-2965309:-1:exon
so has part: feature:2964962-2965064:-1:exon
so has part: feature:2964092-2964299:-1:exon
so has part: feature:2963623-2963714:-1:exon
so has part: feature:2963221-2963358:-1:exon
so has part: feature:2962079-2962366:-1:exon

position:2971000:-1
position: 2971000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2970982-2971000:-1:exon

position:2970982:-1
position: 2970982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2970474-2970646:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2969948-2970037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2969712-2969831:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2969135-2969273:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2968853-2969040:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2968620-2968764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2967699-2967899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2967353-2967464:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2967186-2967257:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2966525-2966668:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2966282-2966447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2965858-2966022:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2965170-2965309:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2964962-2965064:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2964092-2964299:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2963623-2963714:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2963221-2963358:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2962079-2962366:-1:exon

KIF20A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KIF20A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF20A
translation: MAQALASPGLFSDDEAAASPVLESTAAGFGADVRKDLLQEFSAISPDLEASQAVADDNNGKLKVYLRVRPLKSAEVEKGEDQGCVCIENSETLVLKAPKNSFTMRSTERGVGHAVHRFSFSRIFGPEVGQKLFFDETMKQVVKDVLSGQNCLVYTYGITNSGKTHTIQGTTQDGGILPRSLATIFNSVGDRLYQAMDLKPILSNEVTWLDSRQVQQEETKKQMMLQGGLWEEELLTPLKRSRSAESQLQATTSGSFDSGVAGLSSSSQLTNRSDLSQTEEVGPCWADLDRISLTSTGNVQFSIWVSFFEIYNELIYDLLEPVLAGQNRKRQTLRLCEDQTGNPYVKDLNWINVRDADEAWKLLKLGRKNQSFASTQMNHNSSRSHSVFSIRILHLQRGGSEFVPKISELSLCDLAGSERCKDQKNGDRMKEANNINTSLHTLGRCIAALRQNQQARTKQTVVPFRDSKLTRVFQGFFTGRGRSCMIVNINQCASTYDETLHVAKFSAIASQLVQAPPTKLGLPSLQSIIKEHNRRTSQGPEAESEEDVESEEDTNDEADVSMYEKKDLLRVVEAARELLVQERQKKLQLEMRLREEICNEMLERMQQKEQWWSQHVDAQREQLEELYEDKMTILKELLTDHYQEKMQERDEEILELKAALQETKQKLESLDAKQKDSEQSVRRSKRVAPSSALQQELADTKARLEKCQKELNSTSAELLKYQKLVEPPPSARPITMDVDRKLEDGQKNVRLLRSELQKIGESLQSAERACCHSTGAGKLREALGTCDDILARQDQTLAELQNNMMLVKLDLRKKAACIAEQYHTVQKLQAPPTSALKKRFCANRENLQPNQPPGKKPFLHNILTRSATRPVAARGWQLRSVAL
SIO_010081: KIF20A
subclass of: SO_0000673
so part of: KIF20A
location: complement(join(2962094..2962366,2963221..2963358,2963623..2963714,2964092..2964299,2964962..2965064,2965170..2965309,2965858..2966022,2966282..2966447,2966525..2966668,2967186..2967257,2967353..2967464,2967699..2967899,2968620..2968764,2968853..2969040,2969135..2969273,2969712..2969831,2969948..2970037,2970474..2970629))
location: region:2962094-2970629:-1
so has part: feature:2970474-2970629:-1:exon
so has part: feature:2969948-2970037:-1:exon
so has part: feature:2969712-2969831:-1:exon
so has part: feature:2969135-2969273:-1:exon
so has part: feature:2968853-2969040:-1:exon
so has part: feature:2968620-2968764:-1:exon
so has part: feature:2967699-2967899:-1:exon
so has part: feature:2967353-2967464:-1:exon
so has part: feature:2967186-2967257:-1:exon
so has part: feature:2966525-2966668:-1:exon
so has part: feature:2966282-2966447:-1:exon
so has part: feature:2965858-2966022:-1:exon
so has part: feature:2965170-2965309:-1:exon
so has part: feature:2964962-2965064:-1:exon
so has part: feature:2964092-2964299:-1:exon
so has part: feature:2963623-2963714:-1:exon
so has part: feature:2963221-2963358:-1:exon
so has part: feature:2962094-2962366:-1:exon

XP_005053703.1
type: Protein
SIO_000068: ncbiprotein

position:2962094:-1
position: 2962094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2970629:-1
position: 2970629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2970474-2970629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2969948-2970037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2969712-2969831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2969135-2969273:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2968853-2969040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2968620-2968764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2967699-2967899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2967353-2967464:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2967186-2967257:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2966525-2966668:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2966282-2966447:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2965858-2966022:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2965170-2965309:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2964962-2965064:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2964092-2964299:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2963623-2963714:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2963221-2963358:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2962094-2962366:-1:exon

KIF20A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KIF20A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF20A
translation: MAQALASPGLFSDDEAAASPVLESTAAGFGADVRKDLLQEFSAISPDLEASQAVADDNNGKLKVYLRVRPLKSAEVEKGEDQGCVCIENSETLVLKAPKNSFTMRSTERGVGHAVHRFSFSRIFGPEVGQKLFFDETMKQVVKDVLSGQNCLVYTYGITNSGKTHTIQGTTQDGGILPRSLATIFNSVGDRLYQAMDLKPILSNEVTWLDSRQVQQEETKKQMMLQGGLWEEELLTPLKRSRSAESQLQATTSGSFDSGVAGLSSSSQLTNRSDLSQTEEVGPCWADLDRISLTSTGNVQFSIWVSFFEIYNELIYDLLEPVLAGQNRKRQTLRLCEDQTGNPYVKDLNWINVRDADEAWKLLKLGRKNQSFASTQMNHNSSRSHSVFSIRILHLQRGGSEFVPKISELSLCDLAGSERCKDQKNGDRMKEANNINTSLHTLGRCIAALRQNQQARTKQTVVPFRDSKLTRVFQGFFTGRGRSCMIVNINQCASTYDETLHVAKFSAIASQLVQAPPTKLGLPSLQSIIKEHNRRTSQGPEAESEEDVESEEDTNDEADVSMYEKKDLLRVVEAARELLVQERQKKLQLEMRLREEICNEMLERMQQKEQWWSQHVDAQREQLEELYEDKMTILKELLTDHYQEKMQERDEEILELKAALQETKQKLESLDAKQKDSEQSVRRSKRVAPSSALQQELADTKARLEKCQKELNSTSAELLKYQKLVEPPPSARPITMDVDRKLEDGQKNVRLLRSELQKIGESLQSAERACCHSTGAGKLREALGTCDDILARQDQTLAELQNNMMLVKLDLRKKAACIAEQYHTVQKLQAPPTSALKKRFCANRENLQPNQPPGKKPFLHNILTRSATRPVAARGWQLRSVAL
SIO_010081: KIF20A
subclass of: SO_0000673
so part of: KIF20A
location: complement(join(2962094..2962366,2963221..2963358,2963623..2963714,2964092..2964299,2964962..2965064,2965170..2965309,2965858..2966022,2966282..2966447,2966525..2966668,2967186..2967257,2967353..2967464,2967699..2967899,2968620..2968764,2968853..2969040,2969135..2969273,2969712..2969831,2969948..2970037,2970474..2970629))
location: region:2962094-2970629:-1
so has part: feature:2970474-2970629:-1:exon
so has part: feature:2969948-2970037:-1:exon
so has part: feature:2969712-2969831:-1:exon
so has part: feature:2969135-2969273:-1:exon
so has part: feature:2968853-2969040:-1:exon
so has part: feature:2968620-2968764:-1:exon
so has part: feature:2967699-2967899:-1:exon
so has part: feature:2967353-2967464:-1:exon
so has part: feature:2967186-2967257:-1:exon
so has part: feature:2966525-2966668:-1:exon
so has part: feature:2966282-2966447:-1:exon
so has part: feature:2965858-2966022:-1:exon
so has part: feature:2965170-2965309:-1:exon
so has part: feature:2964962-2965064:-1:exon
so has part: feature:2964092-2964299:-1:exon
so has part: feature:2963623-2963714:-1:exon
so has part: feature:2963221-2963358:-1:exon
so has part: feature:2962094-2962366:-1:exon

XP_005053704.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2970474-2970629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2969948-2970037:-1:exon