Ficedula albicollis isolate OC2 chromosome 12, FicAlb1.5, whole genome shotgun sequence.
type: Entry
definition: Ficedula albicollis isolate OC2 chromosome 12, FicAlb1.5, whole genome shotgun sequence.
sequence version: NC_021684.1
sequence date: 2016-04-20
sequence: sequence
division: CON
label: NC_021684.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA208061
dblink: SAMN02981387
keyword: WGS
keyword: RefSeq
source: Ficedula albicollis (collared flycatcher)
organism: Ficedula albicollis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
reference: 1
references: 23103876
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002001.1.\nAssembly name: FicAlb1.5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Uppsala University on 2013/06/24.\nThe original whole-genome shotgun project has the accession\nAGTO00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: FicAlb1.5\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina GAII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Ficedula albicollis Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21938106
topology: linear
so has quality: SO_0000987
location: 1..21938106
location: region:1-21938106:1
RO_0002162: 59894

NC_021684
type: RefSeq
SIO_000068: refseq

PRJNA208061
type: BioProject
SIO_000068: bioproject

SAMN02981387
type: BioSample
SIO_000068: biosample

1
title: The genomic landscape of species divergence in Ficedula flycatchers
author: Ellegren, H.
author: Smeds, L.
author: Burri, R.
author: Olason, P.I.
author: Backstrom, N.
author: Kawakami, T.
author: Kunstner, A.
author: Makinen, H.
author: Nadachowska-Brzyska, K.
author: Qvarnstrom, A.
author: Uebbing, S.
author: Wolf, J.B.
journal: Nature
volume: 491
issue: 7426
pages: 756-760
year: 2012
pubmed: 23103876

23103876
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21938106:1
position: 21938106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21938106:1:source
so part of: sequence
organism: Ficedula albicollis
mol type: genomic DNA
isolate: OC2
chromosome: 12
sex: male
country: Sweden: Oland
collection date: 2009

59894
type: Taxonomy
SIO_000068: taxonomy

C12H11orf85
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: C12H11orf85
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5165..20675
location: region:5165-20675:1
so has part: feature:5165-20675:1:exon
subclass of: SO_0000010

101812182
type: Gene
SIO_000068: ncbigene

position:5165:1
position: 5165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20675:1
position: 20675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5165-20675:1:exon

C12H11orf85
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: C12H11orf85
product: chromosome 12 open reading frame, human C11orf85
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301320.1
SIO_010081: C12H11orf85
subclass of: SO_0000673
so part of: C12H11orf85
location: join(5165..5202,6036..6184,7734..7809,10635..10760,12073..12104,12842..12951,16018..16072,18909..18981,19087..19231,20599..20675)
location: region:5165-20675:1
so has part: feature:5165-5202:1:exon
so has part: feature:6036-6184:1:exon
so has part: feature:7734-7809:1:exon
so has part: feature:10635-10760:1:exon
so has part: feature:12073-12104:1:exon
so has part: feature:12842-12951:1:exon
so has part: feature:16018-16072:1:exon
so has part: feature:18909-18981:1:exon
so has part: feature:19087-19231:1:exon
so has part: feature:20599-20675:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5165-5202:1:exon

position:5202:1
position: 5202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6036-6184:1:exon

position:6036:1
position: 6036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6184:1
position: 6184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7734-7809:1:exon

position:7734:1
position: 7734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7809:1
position: 7809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10635-10760:1:exon

position:10635:1
position: 10635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10760:1
position: 10760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12073-12104:1:exon

position:12073:1
position: 12073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12104:1
position: 12104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12842-12951:1:exon

position:12842:1
position: 12842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12951:1
position: 12951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16018-16072:1:exon

position:16018:1
position: 16018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16072:1
position: 16072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:18909-18981:1:exon

position:18909:1
position: 18909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18981:1
position: 18981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:19087-19231:1:exon

position:19087:1
position: 19087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19231:1
position: 19231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:20599-20675:1:exon

position:20599:1
position: 20599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C12H11orf85
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: C12H11orf85
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:6173..6175,aa:OTHER)
product: LOW QUALITY PROTEIN: membrane-anchored junction protein
translation: MSLKPFAYPLPETRFLHAGRHVYKFKLRYGNFNRYVCXSLEEVIRVILGNLDDLHPFSTDHFTVFPYLSKWEQVSKMKFKHENVHLVPYPYICTLYLELNSFQRNISCGKEVNKGSDELVRRRNEVSENTAMKESVKRRRVEVRDDASCPQSYMDRTGADCVHQMNKAEHGFEKNSSKANELEFSPASLTKDCDQLNFWEPVKFGLEQKRVASQAEGAVQLLQQMDQTGKKGNMKSEGRGLSHFWRSIIFSPLQHLFGGKN
SIO_010081: C12H11orf85
subclass of: SO_0000673
so part of: C12H11orf85
location: join(6062..6184,7734..7809,10635..10760,12073..12104,12842..12951,16018..16072,18909..18981,19087..19231,20599..20644)
location: region:6062-20644:1
so has part: feature:6062-6184:1:exon
so has part: feature:7734-7809:1:exon
so has part: feature:10635-10760:1:exon
so has part: feature:12073-12104:1:exon
so has part: feature:12842-12951:1:exon
so has part: feature:16018-16072:1:exon
so has part: feature:18909-18981:1:exon
so has part: feature:19087-19231:1:exon
so has part: feature:20599-20644:1:exon

XP_016156806.1
type: Protein
SIO_000068: ncbiprotein

position:6062:1
position: 6062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20644:1
position: 20644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6062-6184:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7734-7809:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10635-10760:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12073-12104:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12842-12951:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16018-16072:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:18909-18981:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19087-19231:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20599-20644:1:exon

LOC101812972
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101812972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 25063..28310
location: region:25063-28310:1
so has part: feature:25063-28310:1:exon
subclass of: SO_0000010

101812972
type: Gene
SIO_000068: ncbigene

position:25063:1
position: 25063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28310:1
position: 28310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25063-28310:1:exon

LOC101812972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101812972
product: antigen-presenting glycoprotein CD1d-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052806.1
SIO_010081: LOC101812972
subclass of: SO_0000673
so part of: LOC101812972
location: join(25063..25292,25609..25866,26024..26593,26751..27032,27122..27406,27512..27608,27770..28310)
location: region:25063-28310:1
so has part: feature:25063-25292:1:exon
so has part: feature:25609-25866:1:exon
so has part: feature:26024-26593:1:exon
so has part: feature:26751-27032:1:exon
so has part: feature:27122-27406:1:exon
so has part: feature:27512-27608:1:exon
so has part: feature:27770-28310:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25063-25292:1:exon

position:25292:1
position: 25292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:25609-25866:1:exon

position:25609:1
position: 25609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25866:1
position: 25866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26024-26593:1:exon

position:26024:1
position: 26024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26593:1
position: 26593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:26751-27032:1:exon

position:26751:1
position: 26751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27032:1
position: 27032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27122-27406:1:exon

position:27122:1
position: 27122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27406:1
position: 27406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:27512-27608:1:exon

position:27512:1
position: 27512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27608:1
position: 27608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:27770-28310:1:exon

position:27770:1
position: 27770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101812972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101812972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like
translation: MQSPRCCLLSLLLYLFLLSGTWANLEGAFTLRLLQTTTFQNTSFTDMEGLGLLEDIELGCLDKHTWSIHFCQPWVRPALPHVDWDTIENLLKVYLQKFRHLINEGAMQRDIPYPFVVQCMAGCVLYSNRTSQAFAYVGYNGQDFLSFDTENVTWTLSQDTELSRYVQSFLQNYTALNELVEIIFNDTCADEMEVFLQYGRTAFPVPSPPCQPLSHVGAFTLRLLQTTTFQNTSFTDMEGLGLLEDIELGCLDKHTWSIHFCQPWVRPALPHVDWDTIENLLKVYLQKFRHLINEGAMQRDIPYPFVVQCMAGCVLYSNRTSQAFAYVGYNGQDFLSFDTENVTWTLSQDTELSRYVQSFLQNYTALNELVEIIFNDTCADEMEVFLQYGRTVLERQELPVATVFTRTPSLDQLLLVCHVTGFYPRPISVAWLRDGQEVPPGPALNTSTILPNADLTYQLRSVLAVAPRDGHSYVCRVRHHSLGTRSLLIPWGNSEVVLITGLVAGLLAAVAVAAMSVLWVWRQRKHQQMEESESRNSILSREA
SIO_010081: LOC101812972
subclass of: SO_0000673
so part of: LOC101812972
location: join(25214..25292,25609..25866,26024..26593,26751..27032,27122..27406,27512..27608,27770..27830)
location: region:25214-27830:1
so has part: feature:25214-25292:1:exon
so has part: feature:25609-25866:1:exon
so has part: feature:26024-26593:1:exon
so has part: feature:26751-27032:1:exon
so has part: feature:27122-27406:1:exon
so has part: feature:27512-27608:1:exon
so has part: feature:27770-27830:1:exon

XP_005052863.1
type: Protein
SIO_000068: ncbiprotein

position:25214:1
position: 25214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27830:1
position: 27830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25214-25292:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25609-25866:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:26024-26593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26751-27032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27122-27406:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:27512-27608:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:27770-27830:1:exon

LOC101811595
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101811595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 31915..36397
location: region:31915-36397:1
so has part: feature:31915-36397:1:exon
subclass of: SO_0000010

101811595
type: Gene
SIO_000068: ncbigene

position:31915:1
position: 31915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36397:1
position: 36397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31915-36397:1:exon

LOC101811595
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811595
product: antigen-presenting glycoprotein CD1d-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005052799.2
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(31915..32107,33304..33564,34097..34224,35192..35348,35438..35722,35844..35940,36075..36397)
location: region:31915-36397:1
so has part: feature:31915-32107:1:exon
so has part: feature:33304-33564:1:exon
so has part: feature:34097-34224:1:exon
so has part: feature:35192-35348:1:exon
so has part: feature:35438-35722:1:exon
so has part: feature:35844-35940:1:exon
so has part: feature:36075-36397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31915-32107:1:exon

position:32107:1
position: 32107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33304-33564:1:exon

position:33304:1
position: 33304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33564:1
position: 33564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34224:1:exon

position:34097:1
position: 34097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34224:1
position: 34224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35192-35348:1:exon

position:35192:1
position: 35192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35348:1
position: 35348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:35438-35722:1:exon

position:35438:1
position: 35438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35722:1
position: 35722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:35844-35940:1:exon

position:35844:1
position: 35844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35940:1
position: 35940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:36075-36397:1:exon

position:36075:1
position: 36075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101811595
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811595
product: antigen-presenting glycoprotein CD1d-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005052801.2
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(31915..32107,33307..33564,34097..34224,35192..35348,35438..35722,35844..35940,36075..36397)
location: region:31915-36397:1
so has part: feature:31915-32107:1:exon
so has part: feature:33307-33564:1:exon
so has part: feature:34097-34224:1:exon
so has part: feature:35192-35348:1:exon
so has part: feature:35438-35722:1:exon
so has part: feature:35844-35940:1:exon
so has part: feature:36075-36397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31915-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33307-33564:1:exon

position:33307:1
position: 33307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35192-35348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35438-35722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35844-35940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36075-36397:1:exon

LOC101811595
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811595
product: antigen-presenting glycoprotein CD1d-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005052802.2
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(31915..32107,33388..33564,34097..34224,35192..35348,35438..35722,35844..35940,36075..36397)
location: region:31915-36397:1
so has part: feature:31915-32107:1:exon
so has part: feature:33388-33564:1:exon
so has part: feature:34097-34224:1:exon
so has part: feature:35192-35348:1:exon
so has part: feature:35438-35722:1:exon
so has part: feature:35844-35940:1:exon
so has part: feature:36075-36397:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31915-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33388-33564:1:exon

position:33388:1
position: 33388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35192-35348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35438-35722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35844-35940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36075-36397:1:exon

LOC101811595
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811595
product: antigen-presenting glycoprotein CD1d-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005052800.1
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(31915..32107,33304..33564,34097..34381,34471..34755,34877..34973,35108..35183)
location: region:31915-35183:1
so has part: feature:31915-32107:1:exon
so has part: feature:33304-33564:1:exon
so has part: feature:34097-34381:1:exon
so has part: feature:34471-34755:1:exon
so has part: feature:34877-34973:1:exon
so has part: feature:35108-35183:1:exon

position:35183:1
position: 35183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31915-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33304-33564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34381:1:exon

position:34381:1
position: 34381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:34471-34755:1:exon

position:34471:1
position: 34471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34755:1
position: 34755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:34877-34973:1:exon

position:34877:1
position: 34877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34973:1
position: 34973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:35108-35183:1:exon

position:35108:1
position: 35108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101811595
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101811595
product: antigen-presenting glycoprotein CD1d-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016301308.1
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(31915..32107,33307..33564,34097..34381,34471..34755,34877..34973,35108..35183)
location: region:31915-35183:1
so has part: feature:31915-32107:1:exon
so has part: feature:33307-33564:1:exon
so has part: feature:34097-34381:1:exon
so has part: feature:34471-34755:1:exon
so has part: feature:34877-34973:1:exon
so has part: feature:35108-35183:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31915-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33307-33564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34471-34755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34877-34973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35108-35183:1:exon

LOC101811595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like isoform X1
translation: MQPPHLLLFLFLPILLPGMWADLEAEPQVIQYLLTGLFANISSAEVSCVALVGDISILTLDPANWSVHFHWPWASQAAAEGDGEKIMSQYKIVLRNMIRFVHDTVQQTKQHYPLVVQFRAGCVLYPNMTSQSFLNVGWGGRDLVTFEVDKQRWEAQQPSQVAEVVSKSLNRQKSVSVLLEYLLTIWICQSNLQTLKRYGREILERQELPVATVFTRTPSLDQLLLVCHVTGFYPRPISVAWLRDGQEVPPGPALNTSTILPNADLTYQLRSVLAVAPRDGHSYVCRVRHHSLGTRSLLIPWENRSTAPAISITIAVLLLVATASAGGFWWWKNRTGNEATWETQEFII
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(32035..32107,33304..33564,34097..34224,35192..35348,35438..35722,35844..35940,36075..36120)
location: region:32035-36120:1
so has part: feature:32035-32107:1:exon
so has part: feature:33304-33564:1:exon
so has part: feature:34097-34224:1:exon
so has part: feature:35192-35348:1:exon
so has part: feature:35438-35722:1:exon
so has part: feature:35844-35940:1:exon
so has part: feature:36075-36120:1:exon

XP_005052856.1
type: Protein
SIO_000068: ncbiprotein

position:32035:1
position: 32035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36120:1
position: 36120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32035-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33304-33564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35192-35348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35438-35722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35844-35940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36075-36120:1:exon

LOC101811595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like isoform X3
translation: MQPPHLLLFLFLPILLPGMWADLEEPQVIQYLLTGLFANISSAEVSCVALVGDISILTLDPANWSVHFHWPWASQAAAEGDGEKIMSQYKIVLRNMIRFVHDTVQQTKQHYPLVVQFRAGCVLYPNMTSQSFLNVGWGGRDLVTFEVDKQRWEAQQPSQVAEVVSKSLNRQKSVSVLLEYLLTIWICQSNLQTLKRYGREILERQELPVATVFTRTPSLDQLLLVCHVTGFYPRPISVAWLRDGQEVPPGPALNTSTILPNADLTYQLRSVLAVAPRDGHSYVCRVRHHSLGTRSLLIPWENRSTAPAISITIAVLLLVATASAGGFWWWKNRTGNEATWETQEFII
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(32035..32107,33307..33564,34097..34224,35192..35348,35438..35722,35844..35940,36075..36120)
location: region:32035-36120:1
so has part: feature:32035-32107:1:exon
so has part: feature:33307-33564:1:exon
so has part: feature:34097-34224:1:exon
so has part: feature:35192-35348:1:exon
so has part: feature:35438-35722:1:exon
so has part: feature:35844-35940:1:exon
so has part: feature:36075-36120:1:exon

XP_005052858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32035-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33307-33564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35192-35348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35438-35722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35844-35940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36075-36120:1:exon

LOC101811595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-cell surface glycoprotein CD1b-3-like isoform X5
translation: MQPPHLLLFLFLPILLPGMWADLEGDISILTLDPANWSVHFHWPWASQAAAEGDGEKIMSQYKIVLRNMIRFVHDTVQQTKQHYPLVVQFRAGCVLYPNMTSQSFLNVGWGGRDLVTFEVDKQRWEAQQPSQVAEVVSKSLNRQKSVSVLLEYLLTIWICQSNLQTLKRYGREILERQELPVATVFTRTPSLDQLLLVCHVTGFYPRPISVAWLRDGQEVPPGPALNTSTILPNADLTYQLRSVLAVAPRDGHSYVCRVRHHSLGTRSLLIPWENRSTAPAISITIAVLLLVATASAGGFWWWKNRTGNEATWETQEFII
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(32035..32107,33388..33564,34097..34224,35192..35348,35438..35722,35844..35940,36075..36120)
location: region:32035-36120:1
so has part: feature:32035-32107:1:exon
so has part: feature:33388-33564:1:exon
so has part: feature:34097-34224:1:exon
so has part: feature:35192-35348:1:exon
so has part: feature:35438-35722:1:exon
so has part: feature:35844-35940:1:exon
so has part: feature:36075-36120:1:exon

XP_005052859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32035-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33388-33564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35192-35348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:35438-35722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35844-35940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36075-36120:1:exon

LOC101811595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like isoform X2
translation: MQPPHLLLFLFLPILLPGMWADLEAEPQVIQYLLTGLFANISSAEVSCVALVGDISILTLDPANWSVHFHWPWASQAAAEGDGEKIMSQYKIVLRNMIRFVHDTVQQTKQHYPLVVQFRAGCVLYPNMTSQSFLNVGWGGRDLVTFEVDKQRWEAQQPSQVAEVVSKSLNRQKSVSVLLEYLLTIWICQSNLQTLKRYGREILERQELPVATVFTRTPSLDQLLLVCHVTGFYPRPISVAWLRDGQEVPPGPALNTSTILPNADLTYQLRSVLAVAPRDGHSYVCRVRHHSLGTRSLLIPWENRSTAPAISITIAVLLLVATASAGGFWWWKNRTGNEATWETQEFII
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(32035..32107,33304..33564,34097..34381,34471..34755,34877..34973,35108..35153)
location: region:32035-35153:1
so has part: feature:32035-32107:1:exon
so has part: feature:33304-33564:1:exon
so has part: feature:34097-34381:1:exon
so has part: feature:34471-34755:1:exon
so has part: feature:34877-34973:1:exon
so has part: feature:35108-35153:1:exon

XP_005052857.1
type: Protein
SIO_000068: ncbiprotein

position:35153:1
position: 35153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32035-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33304-33564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34471-34755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34877-34973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35108-35153:1:exon

LOC101811595
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101811595
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen-presenting glycoprotein CD1d-like isoform X4
translation: MQPPHLLLFLFLPILLPGMWADLEEPQVIQYLLTGLFANISSAEVSCVALVGDISILTLDPANWSVHFHWPWASQAAAEGDGEKIMSQYKIVLRNMIRFVHDTVQQTKQHYPLVVQFRAGCVLYPNMTSQSFLNVGWGGRDLVTFEVDKQRWEAQQPSQVAEVVSKSLNRQKSVSVLLEYLLTIWICQSNLQTLKRYGREILERQELPVATVFTRTPSLDQLLLVCHVTGFYPRPISVAWLRDGQEVPPGPALNTSTILPNADLTYQLRSVLAVAPRDGHSYVCRVRHHSLGTRSLLIPWENRSTAPAISITIAVLLLVATASAGGFWWWKNRTGNEATWETQEFII
SIO_010081: LOC101811595
subclass of: SO_0000673
so part of: LOC101811595
location: join(32035..32107,33307..33564,34097..34381,34471..34755,34877..34973,35108..35153)
location: region:32035-35153:1
so has part: feature:32035-32107:1:exon
so has part: feature:33307-33564:1:exon
so has part: feature:34097-34381:1:exon
so has part: feature:34471-34755:1:exon
so has part: feature:34877-34973:1:exon
so has part: feature:35108-35153:1:exon

XP_016156794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32035-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33307-33564:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34097-34381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34471-34755:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34877-34973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35108-35153:1:exon

BICD2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 44729..98718
location: region:44729-98718:1
so has part: feature:44729-98718:1:exon
subclass of: SO_0000010

101811270
type: Gene
SIO_000068: ncbigene

position:44729:1
position: 44729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98718:1
position: 98718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44729-98718:1:exon

BICD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BICD2
product: BICD cargo adaptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005052798.2
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(44729..45160,76962..77174,80034..80186,83147..83599,84544..85563,86624..86775,93758..93968,97142..98718)
location: region:44729-98718:1
so has part: feature:44729-45160:1:exon
so has part: feature:76962-77174:1:exon
so has part: feature:80034-80186:1:exon
so has part: feature:83147-83599:1:exon
so has part: feature:84544-85563:1:exon
so has part: feature:86624-86775:1:exon
so has part: feature:93758-93968:1:exon
so has part: feature:97142-98718:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:44729-45160:1:exon

position:45160:1
position: 45160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:76962-77174:1:exon

position:76962:1
position: 76962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77174:1
position: 77174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80034-80186:1:exon

position:80034:1
position: 80034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80186:1
position: 80186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83147-83599:1:exon

position:83147:1
position: 83147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83599:1
position: 83599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:84544-85563:1:exon

position:84544:1
position: 84544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85563:1
position: 85563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:86624-86775:1:exon

position:86624:1
position: 86624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86775:1
position: 86775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:93758-93968:1:exon

position:93758:1
position: 93758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93968:1
position: 93968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:97142-98718:1:exon

position:97142:1
position: 97142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BICD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BICD2
product: BICD cargo adaptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005052797.2
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(44729..45160,76962..77174,80034..80186,83147..83599,84544..85563,86624..86775,93758..95563)
location: region:44729-95563:1
so has part: feature:44729-45160:1:exon
so has part: feature:76962-77174:1:exon
so has part: feature:80034-80186:1:exon
so has part: feature:83147-83599:1:exon
so has part: feature:84544-85563:1:exon
so has part: feature:86624-86775:1:exon
so has part: feature:93758-95563:1:exon

position:95563:1
position: 95563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44729-45160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76962-77174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80034-80186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83147-83599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84544-85563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86624-86775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93758-95563:1:exon

BICD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X2
translation: MSLAMEEEEYARLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELEVEYETIRTEMEQLKEAFGQAHTNHKKVAADGESREETLIQESATKEEYYMKKVMELQTELKQIRNVLTNTQSENERLNSVAQELKEVNQNVEIQRARLRDDIKEYKFREARLLQDYTELEEENICLQKQVSVLKQSQVEFEGLKHEIKRLEEETEFLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMNINDSMYNSHLNISLDGLKFSDEATEPNNDEIMNGFEQNCLSKLSNGKNSTSTPKKNESFPPAPSLVSDLLSELNISEIQKLKQQLVQMEREKVNLLTTLQESQKQLENTRGALSEQHEKIGRLTENLNAMKKLQVSKERQSALDNEKDRDSHEDGDYYEVDINGPEILECKYKVAVVEITDLKEELKNLKAKYKECESKYEEEKSRYETESQALTEKITSLEKSSRHDREQMARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYKEGKGGRSSPETKGRRSPILLSKGLLTIELGKAENGSCDSSPSPVSSLPSPVSDPRKEPMNIYNLIAIIRDQIKHLQAAVDRTTELSRQRVATQELGPVVDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEHLELDHEQSKRVRTKSASKAKGSNPSL
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(44921..45160,76962..77174,80034..80186,83147..83599,84544..85563,86624..86775,93758..93968,97142..97147)
location: region:44921-97147:1
so has part: feature:44921-45160:1:exon
so has part: feature:76962-77174:1:exon
so has part: feature:80034-80186:1:exon
so has part: feature:83147-83599:1:exon
so has part: feature:84544-85563:1:exon
so has part: feature:86624-86775:1:exon
so has part: feature:93758-93968:1:exon
so has part: feature:97142-97147:1:exon

XP_005052855.1
type: Protein
SIO_000068: ncbiprotein

position:44921:1
position: 44921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97147:1
position: 97147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44921-45160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76962-77174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80034-80186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83147-83599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84544-85563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86624-86775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93758-93968:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97142-97147:1:exon

BICD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BICD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein bicaudal D homolog 2 isoform X1
translation: MSLAMEEEEYARLVMESEPEWLRSEIKRLFQELGETTREKIQAAEYGLAVLEEKQQLKQQYEELEVEYETIRTEMEQLKEAFGQAHTNHKKVAADGESREETLIQESATKEEYYMKKVMELQTELKQIRNVLTNTQSENERLNSVAQELKEVNQNVEIQRARLRDDIKEYKFREARLLQDYTELEEENICLQKQVSVLKQSQVEFEGLKHEIKRLEEETEFLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMNINDSMYNSHLNISLDGLKFSDEATEPNNDEIMNGFEQNCLSKLSNGKNSTSTPKKNESFPPAPSLVSDLLSELNISEIQKLKQQLVQMEREKVNLLTTLQESQKQLENTRGALSEQHEKIGRLTENLNAMKKLQVSKERQSALDNEKDRDSHEDGDYYEVDINGPEILECKYKVAVVEITDLKEELKNLKAKYKECESKYEEEKSRYETESQALTEKITSLEKSSRHDREQMARLEKELKKVSDVAGETQGSLSVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYKEGKGGRSSPETKGRRSPILLSKGLLTIELGKAENGSCDSSPSPVSSLPSPVSDPRKEPMNIYNLIAIIRDQIKHLQAAVDRTTELSRQRVATQELGPVVDKDKEALMEEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYVTQLDEMQRQLAAAEDEKKTLNSLLRMAIQQKLALTQRLEHLELDHEQSKRVRTKSASKAKGSNPSVSHIRSCGDRSEGSVLNNQVFCSEKYKIYCD
SIO_010081: BICD2
subclass of: SO_0000673
so part of: BICD2
location: join(44921..45160,76962..77174,80034..80186,83147..83599,84544..85563,86624..86775,93758..94064)
location: region:44921-94064:1
so has part: feature:44921-45160:1:exon
so has part: feature:76962-77174:1:exon
so has part: feature:80034-80186:1:exon
so has part: feature:83147-83599:1:exon
so has part: feature:84544-85563:1:exon
so has part: feature:86624-86775:1:exon
so has part: feature:93758-94064:1:exon

XP_005052854.1
type: Protein
SIO_000068: ncbiprotein

position:94064:1
position: 94064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44921-45160:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:76962-77174:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80034-80186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83147-83599:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84544-85563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86624-86775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:93758-94064:1:exon

FGD3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 108931..196453
location: region:108931-196453:1
so has part: feature:108931-196453:1:exon
subclass of: SO_0000010

101810754
type: Gene
SIO_000068: ncbigene

position:108931:1
position: 108931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196453:1
position: 196453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108931-196453:1:exon

FGD3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_219070.2
SIO_010081: FGD3
so part of: FGD3
location: join(108931..109258,146881..147051,151436..151604,152875..153472,159383..159472,160673..160809,162128..162284,166314..166452,167244..167302,168874..169020,169692..169784,171662..171741,172143..172173,172645..172746,176907..176969,179783..179905,182280..182432,184054..184194,188769..188861,193443..193523)
location: region:108931-193523:1
so has part: feature:108931-109258:1:exon
so has part: feature:146881-147051:1:exon
so has part: feature:151436-151604:1:exon
so has part: feature:152875-153472:1:exon
so has part: feature:159383-159472:1:exon
so has part: feature:160673-160809:1:exon
so has part: feature:162128-162284:1:exon
so has part: feature:166314-166452:1:exon
so has part: feature:167244-167302:1:exon
so has part: feature:168874-169020:1:exon
so has part: feature:169692-169784:1:exon
so has part: feature:171662-171741:1:exon
so has part: feature:172143-172173:1:exon
so has part: feature:172645-172746:1:exon
so has part: feature:176907-176969:1:exon
so has part: feature:179783-179905:1:exon
so has part: feature:182280-182432:1:exon
so has part: feature:184054-184194:1:exon
so has part: feature:188769-188861:1:exon
so has part: feature:193443-193523:1:exon

position:193523:1
position: 193523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108931-109258:1:exon

position:109258:1
position: 109258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146881-147051:1:exon

position:146881:1
position: 146881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147051:1
position: 147051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151436-151604:1:exon

position:151436:1
position: 151436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151604:1
position: 151604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152875-153472:1:exon

position:152875:1
position: 152875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153472:1
position: 153472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:159383-159472:1:exon

position:159383:1
position: 159383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159472:1
position: 159472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:160673-160809:1:exon

position:160673:1
position: 160673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160809:1
position: 160809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162128-162284:1:exon

position:162128:1
position: 162128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162284:1
position: 162284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:166314-166452:1:exon

position:166314:1
position: 166314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166452:1
position: 166452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:167244-167302:1:exon

position:167244:1
position: 167244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167302:1
position: 167302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:168874-169020:1:exon

position:168874:1
position: 168874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169020:1
position: 169020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:169692-169784:1:exon

position:169692:1
position: 169692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169784:1
position: 169784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:171662-171741:1:exon

position:171662:1
position: 171662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171741:1
position: 171741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:172143-172173:1:exon

position:172143:1
position: 172143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172173:1
position: 172173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:172645-172746:1:exon

position:172645:1
position: 172645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172746:1
position: 172746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:176907-176969:1:exon

position:176907:1
position: 176907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176969:1
position: 176969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:179783-179905:1:exon

position:179783:1
position: 179783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179905:1
position: 179905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:182280-182432:1:exon

position:182280:1
position: 182280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182432:1
position: 182432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:184054-184194:1:exon

position:184054:1
position: 184054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184194:1
position: 184194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:188769-188861:1:exon

position:188769:1
position: 188769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188861:1
position: 188861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:193443-193523:1:exon

position:193443:1
position: 193443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005052794.2
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(108934..109258,146881..147051,151436..151604,152875..153472,159383..159472,160673..160809,162128..162284,166314..166452,167244..167302,168874..169020,169692..169784,171662..171741,172143..172173,172645..172746,176907..176969,179783..179905,182280..182432,184054..184194,193443..196453)
location: region:108934-196453:1
so has part: feature:108934-109258:1:exon
so has part: feature:146881-147051:1:exon
so has part: feature:151436-151604:1:exon
so has part: feature:152875-153472:1:exon
so has part: feature:159383-159472:1:exon
so has part: feature:160673-160809:1:exon
so has part: feature:162128-162284:1:exon
so has part: feature:166314-166452:1:exon
so has part: feature:167244-167302:1:exon
so has part: feature:168874-169020:1:exon
so has part: feature:169692-169784:1:exon
so has part: feature:171662-171741:1:exon
so has part: feature:172143-172173:1:exon
so has part: feature:172645-172746:1:exon
so has part: feature:176907-176969:1:exon
so has part: feature:179783-179905:1:exon
so has part: feature:182280-182432:1:exon
so has part: feature:184054-184194:1:exon
so has part: feature:193443-196453:1:exon

position:108934:1
position: 108934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108934-109258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146881-147051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151436-151604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152875-153472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159383-159472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160673-160809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162128-162284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166314-166452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:167244-167302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168874-169020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:169692-169784:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:171662-171741:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172143-172173:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:172645-172746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:176907-176969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179783-179905:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:182280-182432:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184054-184194:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193443-196453:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X1
translation: MQLQWEGEETHPPRPAASFVTARPSSARRGSGSAGARRREQMEPEGCPCSPIQIKCHIDSSPVLEACGELQHINSAQCLHQAGRKPKTKTALAKMHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRSLAPGEEEIPISAGVNTLIEKFENIRQPVHVLQRNQLNLALKMEPGLDSSKQMSLCDCDTVAYSGSSTNDKTELDEAEPNVPCSMDLTNADIMKIKDLSIGDNKSHEVCTAVTMSKETQEELGNKDSTAELNGSGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPGEMEPDRKDTKPSSVEQKRDSTQDEDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELKTRITQEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSPFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMVIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIHVIQATIEKHKQNSETFRAFNSSFSQEEEHLPDSSIASTSSVESMPGADGGGALGGSDSSRKSSKSKRDKEKQSCKSCSESFNSITKRRHHCKQCGAVICAKCSEFKPLADTSRHNRVCKECFLHLPASPCSPGVEAAGEQKKRLAAEKQSILAAENSLFSSYLQFLEKGKTWYKMWVTIPKSEPLVLYLQGSSQDGRSLRPIPLPGYEVSLPGSGEKFDLKHVFKLCQSHQTLYFSAEDEELQVKWMEVLTKVAKGETEDTAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(109123..109258,146881..147051,151436..151604,152875..153472,159383..159472,160673..160809,162128..162284,166314..166452,167244..167302,168874..169020,169692..169784,171662..171741,172143..172173,172645..172746,176907..176969,179783..179905,182280..182432,184054..184194,193443..193667)
location: region:109123-193667:1
so has part: feature:109123-109258:1:exon
so has part: feature:146881-147051:1:exon
so has part: feature:151436-151604:1:exon
so has part: feature:152875-153472:1:exon
so has part: feature:159383-159472:1:exon
so has part: feature:160673-160809:1:exon
so has part: feature:162128-162284:1:exon
so has part: feature:166314-166452:1:exon
so has part: feature:167244-167302:1:exon
so has part: feature:168874-169020:1:exon
so has part: feature:169692-169784:1:exon
so has part: feature:171662-171741:1:exon
so has part: feature:172143-172173:1:exon
so has part: feature:172645-172746:1:exon
so has part: feature:176907-176969:1:exon
so has part: feature:179783-179905:1:exon
so has part: feature:182280-182432:1:exon
so has part: feature:184054-184194:1:exon
so has part: feature:193443-193667:1:exon

XP_005052851.1
type: Protein
SIO_000068: ncbiprotein

position:109123:1
position: 109123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193667:1
position: 193667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109123-109258:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:146881-147051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151436-151604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152875-153472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159383-159472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160673-160809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162128-162284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166314-166452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:167244-167302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168874-169020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:169692-169784:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:171662-171741:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172143-172173:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:172645-172746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:176907-176969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179783-179905:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:182280-182432:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184054-184194:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193443-193667:1:exon

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005052796.2
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(133412..133483,146881..147051,151436..151604,152875..153472,159383..159472,160673..160809,162128..162284,166314..166452,167244..167302,168874..169020,169692..169784,171662..171741,172143..172173,172645..172746,176907..176969,179783..179905,182280..182432,184054..184194,193443..196453)
location: region:133412-196453:1
so has part: feature:133412-133483:1:exon
so has part: feature:146881-147051:1:exon
so has part: feature:151436-151604:1:exon
so has part: feature:152875-153472:1:exon
so has part: feature:159383-159472:1:exon
so has part: feature:160673-160809:1:exon
so has part: feature:162128-162284:1:exon
so has part: feature:166314-166452:1:exon
so has part: feature:167244-167302:1:exon
so has part: feature:168874-169020:1:exon
so has part: feature:169692-169784:1:exon
so has part: feature:171662-171741:1:exon
so has part: feature:172143-172173:1:exon
so has part: feature:172645-172746:1:exon
so has part: feature:176907-176969:1:exon
so has part: feature:179783-179905:1:exon
so has part: feature:182280-182432:1:exon
so has part: feature:184054-184194:1:exon
so has part: feature:193443-196453:1:exon

position:133412:1
position: 133412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133412-133483:1:exon

position:133483:1
position: 133483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146881-147051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151436-151604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152875-153472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159383-159472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160673-160809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162128-162284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166314-166452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:167244-167302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168874-169020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:169692-169784:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:171662-171741:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172143-172173:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:172645-172746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:176907-176969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179783-179905:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:182280-182432:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184054-184194:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193443-196453:1:exon

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016301419.1
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(143540..143559,146881..147051,151436..151604,152875..153472,159383..159472,160673..160809,162128..162284,166314..166452,167244..167302,168874..169020,169692..169784,171662..171741,172143..172173,172645..172746,176907..176969,179783..179905,182280..182432,184054..184194,193443..196453)
location: region:143540-196453:1
so has part: feature:143540-143559:1:exon
so has part: feature:146881-147051:1:exon
so has part: feature:151436-151604:1:exon
so has part: feature:152875-153472:1:exon
so has part: feature:159383-159472:1:exon
so has part: feature:160673-160809:1:exon
so has part: feature:162128-162284:1:exon
so has part: feature:166314-166452:1:exon
so has part: feature:167244-167302:1:exon
so has part: feature:168874-169020:1:exon
so has part: feature:169692-169784:1:exon
so has part: feature:171662-171741:1:exon
so has part: feature:172143-172173:1:exon
so has part: feature:172645-172746:1:exon
so has part: feature:176907-176969:1:exon
so has part: feature:179783-179905:1:exon
so has part: feature:182280-182432:1:exon
so has part: feature:184054-184194:1:exon
so has part: feature:193443-196453:1:exon

position:143540:1
position: 143540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:143540-143559:1:exon

position:143559:1
position: 143559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146881-147051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151436-151604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152875-153472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159383-159472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160673-160809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162128-162284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166314-166452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:167244-167302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168874-169020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:169692-169784:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:171662-171741:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172143-172173:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:172645-172746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:176907-176969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179783-179905:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:182280-182432:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184054-184194:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193443-196453:1:exon

FGD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FGD3
product: FYVE, RhoGEF and PH domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016301418.1
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(144085..144159,146881..147051,151436..151604,152875..153472,159383..159472,160673..160809,162128..162284,166314..166452,167244..167302,168874..169020,169692..169784,171662..171741,172143..172173,172645..172746,176907..176969,179783..179905,182280..182432,184054..184194,193443..196453)
location: region:144085-196453:1
so has part: feature:144085-144159:1:exon
so has part: feature:146881-147051:1:exon
so has part: feature:151436-151604:1:exon
so has part: feature:152875-153472:1:exon
so has part: feature:159383-159472:1:exon
so has part: feature:160673-160809:1:exon
so has part: feature:162128-162284:1:exon
so has part: feature:166314-166452:1:exon
so has part: feature:167244-167302:1:exon
so has part: feature:168874-169020:1:exon
so has part: feature:169692-169784:1:exon
so has part: feature:171662-171741:1:exon
so has part: feature:172143-172173:1:exon
so has part: feature:172645-172746:1:exon
so has part: feature:176907-176969:1:exon
so has part: feature:179783-179905:1:exon
so has part: feature:182280-182432:1:exon
so has part: feature:184054-184194:1:exon
so has part: feature:193443-196453:1:exon

position:144085:1
position: 144085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144085-144159:1:exon

position:144159:1
position: 144159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146881-147051:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151436-151604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152875-153472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:159383-159472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160673-160809:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162128-162284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166314-166452:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:167244-167302:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:168874-169020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:169692-169784:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:171662-171741:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172143-172173:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:172645-172746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:176907-176969:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:179783-179905:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:182280-182432:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:184054-184194:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:193443-196453:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
translation: MHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRSLAPGEEEIPISAGVNTLIEKFENIRQPVHVLQRNQLNLALKMEPGLDSSKQMSLCDCDTVAYSGSSTNDKTELDEAEPNVPCSMDLTNADIMKIKDLSIGDNKSHEVCTAVTMSKETQEELGNKDSTAELNGSGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPGEMEPDRKDTKPSSVEQKRDSTQDEDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELKTRITQEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSPFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMVIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIHVIQATIEKHKQNSETFRAFNSSFSQEEEHLPDSSIASTSSVESMPGADGGGALGGSDSSRKSSKSKRDKEKQSCKSCSESFNSITKRRHHCKQCGAVICAKCSEFKPLADTSRHNRVCKECFLHLPASPCSPGVEAAGEQKKRLAAEKQSILAAENSLFSSYLQFLEKGKTWYKMWVTIPKSEPLVLYLQGSSQDGRSLRPIPLPGYEVSLPGSGEKFDLKHVFKLCQSHQTLYFSAEDEELQVKWMEVLTKVAKGETEDTAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(147027..147051,151436..151604,152875..153472,159383..159472,160673..160809,162128..162284,166314..166452,167244..167302,168874..169020,169692..169784,171662..171741,172143..172173,172645..172746,176907..176969,179783..179905,182280..182432,184054..184194,193443..193667)
location: region:147027-193667:1
so has part: feature:147027-147051:1:exon
so has part: feature:151436-151604:1:exon
so has part: feature:152875-153472:1:exon
so has part: feature:159383-159472:1:exon
so has part: feature:160673-160809:1:exon
so has part: feature:162128-162284:1:exon
so has part: feature:166314-166452:1:exon
so has part: feature:167244-167302:1:exon
so has part: feature:168874-169020:1:exon
so has part: feature:169692-169784:1:exon
so has part: feature:171662-171741:1:exon
so has part: feature:172143-172173:1:exon
so has part: feature:172645-172746:1:exon
so has part: feature:176907-176969:1:exon
so has part: feature:179783-179905:1:exon
so has part: feature:182280-182432:1:exon
so has part: feature:184054-184194:1:exon
so has part: feature:193443-193667:1:exon

XP_016156904.1
type: Protein
SIO_000068: ncbiprotein

position:147027:1
position: 147027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147027-147051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151436-151604:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152875-153472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159383-159472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160673-160809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162128-162284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:166314-166452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167244-167302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:168874-169020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:169692-169784:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:171662-171741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:172143-172173:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172645-172746:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:176907-176969:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179783-179905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182280-182432:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184054-184194:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:193443-193667:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
translation: MHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRSLAPGEEEIPISAGVNTLIEKFENIRQPVHVLQRNQLNLALKMEPGLDSSKQMSLCDCDTVAYSGSSTNDKTELDEAEPNVPCSMDLTNADIMKIKDLSIGDNKSHEVCTAVTMSKETQEELGNKDSTAELNGSGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPGEMEPDRKDTKPSSVEQKRDSTQDEDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELKTRITQEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSPFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMVIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIHVIQATIEKHKQNSETFRAFNSSFSQEEEHLPDSSIASTSSVESMPGADGGGALGGSDSSRKSSKSKRDKEKQSCKSCSESFNSITKRRHHCKQCGAVICAKCSEFKPLADTSRHNRVCKECFLHLPASPCSPGVEAAGEQKKRLAAEKQSILAAENSLFSSYLQFLEKGKTWYKMWVTIPKSEPLVLYLQGSSQDGRSLRPIPLPGYEVSLPGSGEKFDLKHVFKLCQSHQTLYFSAEDEELQVKWMEVLTKVAKGETEDTAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(147027..147051,151436..151604,152875..153472,159383..159472,160673..160809,162128..162284,166314..166452,167244..167302,168874..169020,169692..169784,171662..171741,172143..172173,172645..172746,176907..176969,179783..179905,182280..182432,184054..184194,193443..193667)
location: region:147027-193667:1
so has part: feature:147027-147051:1:exon
so has part: feature:151436-151604:1:exon
so has part: feature:152875-153472:1:exon
so has part: feature:159383-159472:1:exon
so has part: feature:160673-160809:1:exon
so has part: feature:162128-162284:1:exon
so has part: feature:166314-166452:1:exon
so has part: feature:167244-167302:1:exon
so has part: feature:168874-169020:1:exon
so has part: feature:169692-169784:1:exon
so has part: feature:171662-171741:1:exon
so has part: feature:172143-172173:1:exon
so has part: feature:172645-172746:1:exon
so has part: feature:176907-176969:1:exon
so has part: feature:179783-179905:1:exon
so has part: feature:182280-182432:1:exon
so has part: feature:184054-184194:1:exon
so has part: feature:193443-193667:1:exon

XP_016156905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147027-147051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151436-151604:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152875-153472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159383-159472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160673-160809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162128-162284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:166314-166452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167244-167302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:168874-169020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:169692-169784:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:171662-171741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:172143-172173:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172645-172746:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:176907-176969:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179783-179905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182280-182432:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184054-184194:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:193443-193667:1:exon

FGD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FGD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FYVE, RhoGEF and PH domain-containing protein 3 isoform X2
translation: MHPLQKPQVPPKPVHLKPGQERIPPAPSRPLPADPKSSRSLAPGEEEIPISAGVNTLIEKFENIRQPVHVLQRNQLNLALKMEPGLDSSKQMSLCDCDTVAYSGSSTNDKTELDEAEPNVPCSMDLTNADIMKIKDLSIGDNKSHEVCTAVTMSKETQEELGNKDSTAELNGSGKIPNRDSGIDSPSCSVAGETFPSEEGAEQKKPSMAGNPGEMEPDRKDTKPSSVEQKRDSTQDEDSDIDEGSSEEQEIAEVPKLEYLDVNKCTEPQKLFNIANELLHTEEAYVKRLHLLDQVFCTKLSEAGISSEVITGIFSNISSIYCFHGQFLLPELKTRITQEWSVNPRLGDILQKLAPFLKMYGEYVKNFDRAMDIVNTCMQRSSPFKDVVQNIQKQEVCGNLTLQHHMLEPVQRIPRYELLLKDYLKKLPEESPDRKDAEKSLELISTAANHSNAAIRKMEKMHKLLEVYERLGGEEDIVNPANELIKEGHIQKLSAKNGTAQDRYLFLFNSMVLYCVPKLRLIGQKFSVREKMVIAGLQVQEIAKQNVAHTFSITGKKRSLELQARTEEEKREWIHVIQATIEKHKQNSETFRAFNSSFSQEEEHLPDSSIASTSSVESMPGADGGGALGGSDSSRKSSKSKRDKEKQSCKSCSESFNSITKRRHHCKQCGAVICAKCSEFKPLADTSRHNRVCKECFLHLPASPCSPGVEAAGEQKKRLAAEKQSILAAENSLFSSYLQFLEKGKTWYKMWVTIPKSEPLVLYLQGSSQDGRSLRPIPLPGYEVSLPGSGEKFDLKHVFKLCQSHQTLYFSAEDEELQVKWMEVLTKVAKGETEDTAEGLSNP
SIO_010081: FGD3
subclass of: SO_0000673
so part of: FGD3
location: join(147027..147051,151436..151604,152875..153472,159383..159472,160673..160809,162128..162284,166314..166452,167244..167302,168874..169020,169692..169784,171662..171741,172143..172173,172645..172746,176907..176969,179783..179905,182280..182432,184054..184194,193443..193667)
location: region:147027-193667:1
so has part: feature:147027-147051:1:exon
so has part: feature:151436-151604:1:exon
so has part: feature:152875-153472:1:exon
so has part: feature:159383-159472:1:exon
so has part: feature:160673-160809:1:exon
so has part: feature:162128-162284:1:exon
so has part: feature:166314-166452:1:exon
so has part: feature:167244-167302:1:exon
so has part: feature:168874-169020:1:exon
so has part: feature:169692-169784:1:exon
so has part: feature:171662-171741:1:exon
so has part: feature:172143-172173:1:exon
so has part: feature:172645-172746:1:exon
so has part: feature:176907-176969:1:exon
so has part: feature:179783-179905:1:exon
so has part: feature:182280-182432:1:exon
so has part: feature:184054-184194:1:exon
so has part: feature:193443-193667:1:exon

XP_005052853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:147027-147051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151436-151604:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152875-153472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159383-159472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160673-160809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162128-162284:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:166314-166452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:167244-167302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:168874-169020:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:169692-169784:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:171662-171741:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:172143-172173:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:172645-172746:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:176907-176969:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:179783-179905:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182280-182432:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:184054-184194:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:193443-193667:1:exon

LOC101810625
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101810625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(196697..203868)
location: region:196697-203868:-1
so has part: feature:196697-203868:-1:exon
subclass of: SO_0000011

101810625
type: Gene
SIO_000068: ncbigene

position:196697:-1
position: 196697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:203868:-1
position: 203868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196697-203868:-1:exon

LOC101810625
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101810625
product: uncharacterized LOC101810625, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001611738.1
SIO_010081: LOC101810625
subclass of: SO_0000673
so part of: LOC101810625
location: complement(join(196697..198014,198493..198930,199596..199996,203743..203868))
location: region:196697-203868:-1
so has part: feature:203743-203868:-1:exon
so has part: feature:199596-199996:-1:exon
so has part: feature:198493-198930:-1:exon
so has part: feature:196697-198014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203743-203868:-1:exon

position:203743:-1
position: 203743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199596-199996:-1:exon

position:199596:-1
position: 199596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199996:-1
position: 199996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198493-198930:-1:exon

position:198493:-1
position: 198493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198930:-1
position: 198930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:196697-198014:-1:exon

position:198014:-1
position: 198014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101810625
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101810625
product: uncharacterized LOC101810625, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_219069.2
SIO_010081: LOC101810625
subclass of: SO_0000673
so part of: LOC101810625
location: complement(join(196697..198014,198493..198930,199596..199996,203293..203721))
location: region:196697-203721:-1
so has part: feature:203293-203721:-1:exon
so has part: feature:199596-199996:-1:exon
so has part: feature:198493-198930:-1:exon
so has part: feature:196697-198014:-1:exon

position:203721:-1
position: 203721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203293-203721:-1:exon

position:203293:-1
position: 203293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:199596-199996:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198493-198930:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196697-198014:-1:exon

SUSD3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SUSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <204609..233113
location: region:204609-233113:1
so has part: feature:204609-233113:1:exon
subclass of: SO_0000010

101812771
type: Gene
SIO_000068: ncbigene

position:204609:1
position: 204609
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:233113:1
position: 233113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204609-233113:1:exon

SUSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SUSD3
product: sushi domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052805.2
SIO_010081: SUSD3
subclass of: SO_0000673
so part of: SUSD3
location: join(<204609..204639,219130..219318,221600..221747,225391..225558,232147..233113)
location: region:204609-233113:1
so has part: feature:204609-204639:1:exon
so has part: feature:219130-219318:1:exon
so has part: feature:221600-221747:1:exon
so has part: feature:225391-225558:1:exon
so has part: feature:232147-233113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:204609-204639:1:exon

position:204639:1
position: 204639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:219130-219318:1:exon

position:219130:1
position: 219130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219318:1
position: 219318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:221600-221747:1:exon

position:221600:1
position: 221600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:221747:1
position: 221747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:225391-225558:1:exon

position:225391:1
position: 225391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225558:1
position: 225558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:232147-233113:1:exon

position:232147:1
position: 232147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SUSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SUSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi domain-containing protein 3
translation: GGGGGPRGYTGQCSRLLPPRLGSLQVLHGNGTDVGTVVTFQCSAEHQLEGPGAITCVWKGNSTQWTAGVPSCKPISKYETFGFKVAVIASIVSCAVILLMSMAFLTCCLIKCVKKSERRGTQREMQLWYQLRTEELEHMQAAYFGFKGRNNNNNNKKLKNASVFGDVTNMAYDNQGFYRSQEEWTRGVVVPGCCKDNSHLLKVDKSSRALGAHMVPRHNTALQTVDSIHVVEVYSHKDSYNKPTCQIPG
SIO_010081: SUSD3
subclass of: SO_0000673
so part of: SUSD3
location: join(<204609..204639,219130..219318,221600..221747,225391..225558,232147..232360)
location: region:204609-232360:1
so has part: feature:204609-204639:1:exon
so has part: feature:219130-219318:1:exon
so has part: feature:221600-221747:1:exon
so has part: feature:225391-225558:1:exon
so has part: feature:232147-232360:1:exon

XP_005052862.2
type: Protein
SIO_000068: ncbiprotein

position:232360:1
position: 232360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204609-204639:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219130-219318:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:221600-221747:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225391-225558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:232147-232360:1:exon

CARD19
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CARD19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 233166..251056
location: region:233166-251056:1
so has part: feature:233166-251056:1:exon
subclass of: SO_0000010

101809993
type: Gene
SIO_000068: ncbigene

position:233166:1
position: 233166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251056:1
position: 251056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233166-251056:1:exon

CARD19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CARD19
product: caspase recruitment domain family member 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005052792.2
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(233166..233764,241987..242129,243979..244132,249104..249175,249879..251056)
location: region:233166-251056:1
so has part: feature:233166-233764:1:exon
so has part: feature:241987-242129:1:exon
so has part: feature:243979-244132:1:exon
so has part: feature:249104-249175:1:exon
so has part: feature:249879-251056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233166-233764:1:exon

position:233764:1
position: 233764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241987-242129:1:exon

position:241987:1
position: 241987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242129:1
position: 242129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243979-244132:1:exon

position:243979:1
position: 243979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244132:1
position: 244132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:249104-249175:1:exon

position:249104:1
position: 249104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249175:1
position: 249175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249879-251056:1:exon

position:249879:1
position: 249879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CARD19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CARD19
product: caspase recruitment domain family member 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005052790.2
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(233590..233764,241987..242129,243979..244132,247517..247576,249104..249175,249879..251056)
location: region:233590-251056:1
so has part: feature:233590-233764:1:exon
so has part: feature:241987-242129:1:exon
so has part: feature:243979-244132:1:exon
so has part: feature:247517-247576:1:exon
so has part: feature:249104-249175:1:exon
so has part: feature:249879-251056:1:exon

position:233590:1
position: 233590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233590-233764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241987-242129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243979-244132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247517-247576:1:exon

position:247517:1
position: 247517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247576:1
position: 247576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249104-249175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249879-251056:1:exon

CARD19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CARD19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase recruitment domain-containing protein 19 isoform X1
translation: MSEGTKCTLELPGMLAAMGSTPEADQSYCHRLQHDMYFLTSTSRLNEQVVDKIVLQLNRVYPQILTNEEAEKFRNPKASLHTRLSDLLKHLQKKGDRHCQEFYRALQINAEQLFNDLPSRKILKIPDPTEIDTDKEQYMLNDRGPVFFLACFSMAAGLALFWYCCNSETRVIGRARRILGFSPIIIGRHVRNICMLYLEDMSRN
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(233692..233764,241987..242129,243979..244132,247517..247576,249104..249175,249879..249991)
location: region:233692-249991:1
so has part: feature:233692-233764:1:exon
so has part: feature:241987-242129:1:exon
so has part: feature:243979-244132:1:exon
so has part: feature:247517-247576:1:exon
so has part: feature:249104-249175:1:exon
so has part: feature:249879-249991:1:exon

XP_005052847.2
type: Protein
SIO_000068: ncbiprotein

position:233692:1
position: 233692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249991:1
position: 249991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:233692-233764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241987-242129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243979-244132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247517-247576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249104-249175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249879-249991:1:exon

CARD19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CARD19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase recruitment domain-containing protein 19 isoform X3
translation: MSEGTKCTLELPGMLAAMGSTPEADQSYCHRLQHDMYFLTSTSRLNEQVVDKIVLQLNRVYPQILTNEEAEKFRNPKASLHTRLSDLLKHLQKKGDRHCQEFYRALQINAEQLFNDLPSRKILSPVFFLACFSMAAGLALFWYCCNSETRVIGRARRILGFSPIIIGRHVRNICMLYLEDMSRN
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(233692..233764,241987..242129,243979..244132,249104..249175,249879..249991)
location: region:233692-249991:1
so has part: feature:233692-233764:1:exon
so has part: feature:241987-242129:1:exon
so has part: feature:243979-244132:1:exon
so has part: feature:249104-249175:1:exon
so has part: feature:249879-249991:1:exon

XP_005052849.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:233692-233764:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241987-242129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243979-244132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:249104-249175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249879-249991:1:exon

CARD19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CARD19
product: caspase recruitment domain family member 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052791.2
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(235528..235678,241987..242129,243979..244132,247517..247576,249104..249175,249879..251056)
location: region:235528-251056:1
so has part: feature:235528-235678:1:exon
so has part: feature:241987-242129:1:exon
so has part: feature:243979-244132:1:exon
so has part: feature:247517-247576:1:exon
so has part: feature:249104-249175:1:exon
so has part: feature:249879-251056:1:exon

position:235528:1
position: 235528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235528-235678:1:exon

position:235678:1
position: 235678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241987-242129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243979-244132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247517-247576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249104-249175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249879-251056:1:exon

CARD19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CARD19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: caspase recruitment domain-containing protein 19 isoform X2
translation: MMLYRSYQSYCHRLQHDMYFLTSTSRLNEQVVDKIVLQLNRVYPQILTNEEAEKFRNPKASLHTRLSDLLKHLQKKGDRHCQEFYRALQINAEQLFNDLPSRKILKIPDPTEIDTDKEQYMLNDRGPVFFLACFSMAAGLALFWYCCNSETRVIGRARRILGFSPIIIGRHVRNICMLYLEDMSRN
SIO_010081: CARD19
subclass of: SO_0000673
so part of: CARD19
location: join(235660..235678,241987..242129,243979..244132,247517..247576,249104..249175,249879..249991)
location: region:235660-249991:1
so has part: feature:235660-235678:1:exon
so has part: feature:241987-242129:1:exon
so has part: feature:243979-244132:1:exon
so has part: feature:247517-247576:1:exon
so has part: feature:249104-249175:1:exon
so has part: feature:249879-249991:1:exon

XP_005052848.2
type: Protein
SIO_000068: ncbiprotein

position:235660:1
position: 235660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235660-235678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241987-242129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243979-244132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:247517-247576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:249104-249175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:249879-249991:1:exon

NINJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NINJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(259838..266891)
location: region:259838-266891:-1
so has part: feature:259838-266891:-1:exon
subclass of: SO_0000010

101809805
type: Gene
SIO_000068: ncbigene

position:259838:-1
position: 259838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266891:-1
position: 266891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259838-266891:-1:exon

NINJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NINJ1
product: ninjurin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005052789.2
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(259838..260689,262550..262711,266565..266891))
location: region:259838-266891:-1
so has part: feature:266565-266891:-1:exon
so has part: feature:262550-262711:-1:exon
so has part: feature:259838-260689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266565-266891:-1:exon

position:266565:-1
position: 266565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:262550-262711:-1:exon

position:262550:-1
position: 262550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262711:-1
position: 262711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:259838-260689:-1:exon

position:260689:-1
position: 260689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NINJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NINJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ninjurin-1
translation: MLDIALLMANASQLKAVMEQGPSFSFYVPLIVLISLSLTLQVVVGVLLIFLVKYDLNNPAKHGKLNFLNNLATGLVFIIVVVNIFITAFGVQKPVAESASRQ
SIO_010081: NINJ1
subclass of: SO_0000673
so part of: NINJ1
location: complement(join(262557..262711,266565..266718))
location: region:262557-266718:-1
so has part: feature:266565-266718:-1:exon
so has part: feature:262557-262711:-1:exon

XP_005052846.2
type: Protein
SIO_000068: ncbiprotein

position:262557:-1
position: 262557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266718:-1
position: 266718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266565-266718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:262557-262711:-1:exon

WNK2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: WNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 313620..424886
location: region:313620-424886:1
so has part: feature:313620-424886:1:exon
subclass of: SO_0000010

101812584
type: Gene
SIO_000068: ncbigene

position:313620:1
position: 313620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424886:1
position: 424886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313620-424886:1:exon

WNK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WNK2
product: WNK lysine deficient protein kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301264.1
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(313620..314108,351641..351813,352782..353002,357851..358008,365034..365122,365907..366126,368592..368880,371439..371656,372205..372345,374549..374740,375760..376059,378658..378849,379873..380172,383520..383523,384984..385381,388171..388220,388817..388982,389064..389180,389333..389500,389712..389757,389934..390050,390459..390607,391664..392026,394310..394361,394807..394862,394936..394954,395061..395454,395495..395761,396229..396443,398002..398217,399171..399269,404619..404663,407146..407399,414910..415091,422854..422926,424281..424299,424840..424886)
location: region:313620-424886:1
so has part: feature:313620-314108:1:exon
so has part: feature:351641-351813:1:exon
so has part: feature:352782-353002:1:exon
so has part: feature:357851-358008:1:exon
so has part: feature:365034-365122:1:exon
so has part: feature:365907-366126:1:exon
so has part: feature:368592-368880:1:exon
so has part: feature:371439-371656:1:exon
so has part: feature:372205-372345:1:exon
so has part: feature:374549-374740:1:exon
so has part: feature:375760-376059:1:exon
so has part: feature:378658-378849:1:exon
so has part: feature:379873-380172:1:exon
so has part: feature:383520-383523:1:exon
so has part: feature:384984-385381:1:exon
so has part: feature:388171-388220:1:exon
so has part: feature:388817-388982:1:exon
so has part: feature:389064-389180:1:exon
so has part: feature:389333-389500:1:exon
so has part: feature:389712-389757:1:exon
so has part: feature:389934-390050:1:exon
so has part: feature:390459-390607:1:exon
so has part: feature:391664-392026:1:exon
so has part: feature:394310-394361:1:exon
so has part: feature:394807-394862:1:exon
so has part: feature:394936-394954:1:exon
so has part: feature:395061-395454:1:exon
so has part: feature:395495-395761:1:exon
so has part: feature:396229-396443:1:exon
so has part: feature:398002-398217:1:exon
so has part: feature:399171-399269:1:exon
so has part: feature:404619-404663:1:exon
so has part: feature:407146-407399:1:exon
so has part: feature:414910-415091:1:exon
so has part: feature:422854-422926:1:exon
so has part: feature:424281-424299:1:exon
so has part: feature:424840-424886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313620-314108:1:exon

position:314108:1
position: 314108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351641-351813:1:exon

position:351641:1
position: 351641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351813:1
position: 351813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:352782-353002:1:exon

position:352782:1
position: 352782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353002:1
position: 353002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:357851-358008:1:exon

position:357851:1
position: 357851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358008:1
position: 358008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:365034-365122:1:exon

position:365034:1
position: 365034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365122:1
position: 365122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:365907-366126:1:exon

position:365907:1
position: 365907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366126:1
position: 366126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:368592-368880:1:exon

position:368592:1
position: 368592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368880:1
position: 368880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:371439-371656:1:exon

position:371439:1
position: 371439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371656:1
position: 371656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:372205-372345:1:exon

position:372205:1
position: 372205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372345:1
position: 372345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:374549-374740:1:exon

position:374549:1
position: 374549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374740:1
position: 374740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:375760-376059:1:exon

position:375760:1
position: 375760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376059:1
position: 376059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:378658-378849:1:exon

position:378658:1
position: 378658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378849:1
position: 378849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:379873-380172:1:exon

position:379873:1
position: 379873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380172:1
position: 380172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:383520-383523:1:exon

position:383520:1
position: 383520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383523:1
position: 383523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:384984-385381:1:exon

position:384984:1
position: 384984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385381:1
position: 385381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:388171-388220:1:exon

position:388171:1
position: 388171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388220:1
position: 388220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:388817-388982:1:exon

position:388817:1
position: 388817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388982:1
position: 388982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:389064-389180:1:exon

position:389064:1
position: 389064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389180:1
position: 389180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:389333-389500:1:exon

position:389333:1
position: 389333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389500:1
position: 389500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:389712-389757:1:exon

position:389712:1
position: 389712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389757:1
position: 389757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:389934-390050:1:exon

position:389934:1
position: 389934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390050:1
position: 390050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:390459-390607:1:exon

position:390459:1
position: 390459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390607:1
position: 390607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:391664-392026:1:exon

position:391664:1
position: 391664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392026:1
position: 392026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:394310-394361:1:exon

position:394310:1
position: 394310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394361:1
position: 394361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:394807-394862:1:exon

position:394807:1
position: 394807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394862:1
position: 394862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:394936-394954:1:exon

position:394936:1
position: 394936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394954:1
position: 394954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:395061-395454:1:exon

position:395061:1
position: 395061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395454:1
position: 395454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:395495-395761:1:exon

position:395495:1
position: 395495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395761:1
position: 395761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:396229-396443:1:exon

position:396229:1
position: 396229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396443:1
position: 396443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:398002-398217:1:exon

position:398002:1
position: 398002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398217:1
position: 398217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:399171-399269:1:exon

position:399171:1
position: 399171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399269:1
position: 399269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:404619-404663:1:exon

position:404619:1
position: 404619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404663:1
position: 404663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:407146-407399:1:exon

position:407146:1
position: 407146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407399:1
position: 407399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:414910-415091:1:exon

position:414910:1
position: 414910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415091:1
position: 415091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:422854-422926:1:exon

position:422854:1
position: 422854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422926:1
position: 422926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:424281-424299:1:exon

position:424281:1
position: 424281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424299:1
position: 424299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:424840-424886:1:exon

position:424840:1
position: 424840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase WNK2
translation: MKAVATSPDGRFLKFDIELGRGSFKTVYKGLDTETWVEVAWCELQDRKLTKVERQRFKEEAEMLKGLQHPNIVRFYDFWESCAKGKRCIVLVTELMTSGTLKTYLKRFKVMKPKVLRSWCRQILKGLLFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRKVTCGIKPASFEKVTDPEIKEIIGECICKNKEERYEIKDLLSHAFFAEDTGVRVELAEEDHGRKSSIALRLWVEDPKKLKGKPKDNGAIEFTFDLEKETPDDVAQEMIDSGFFHESDLKIVAKSIRDRVALILWRRERIWPRMQAEERRDSEPGDKLKAPQAQQVQVTYLSHTGQHILSEPEEPEADQHPFQQNLPASVTSVASDSTFDSGQGSTVYSDSQSSQQSVIYSSLPDAVPPAIQRVYSPPLSESQPVPHSLPQLSHYQQPSAVSPKLFPPVLPAVPAAPAVVPQHYQEPALPFPVVPSTVAPLPLGQPPPVLAGQQQQPISQAASLQQVLSSQPVCPLPPAPHLLPPFPAQGSQVPTSSTSLKPLQIPTMPQLPPVAPSQIPQFPVIPAITPLAGLDSLPPNLSDIPAANVPPIPAPSQYFAPAVILPSLPMNPTLPMAPNSPALPMQAVNLPHTTVASLVLPCQPIVPSMPAATIPLLAQQPISQAASLQQVLSSQPVCPLPPAPHLLPPFPAQGSQVPTSSTSLKPLQIPTMPQLPPVAPSQIPQFPVIPAITPLAGLDSLPPNLSDIPAANVPPIPAPSQYFAPAVILPSLPMNPTLPMAPNSPALPMQAVNLPHTTVASLVLPCQPIVPSMPAATIPLLAPSLVALLPCHVGAEPLAQRCVLTALVVLQPMPGHTQFALEAGAQVPVLPVQPSMVMSPPLQLQPELVPPCVPPDGVPQLHGSRASAAPPIPIEPGLPLQPSALLQLQPDLSQPLGQQLPAPCSAVTAGTETSQEEQAMQDKLQALSQGCESYMSPDVASGKEMSDSLEGAAGSGKQEGKSSKKHKKSTRARSRLEKSNRPKLTILNVCNTGDKMVECQLETHNHKMVTFKFDLDGDAPEEIATYMVENEFILQSEKETFIEQMKDIIDKAEDMLSEDTEGERSSDQGTSPQQDADKSEISEEKRQSQMKTPVYQQNVLHTGKRWFIICPVVENPTTDAPEFSPPVPPSAQQTEGPDPEQADDQPVSSAVTEAAGVRAGQQLPLHTGVSDSALGATSSLAPAPAAAGPLAAGQQLAMAQGGTAVAGAGVGLLQQQNPPGATESDGEGPPRVDFVDNTIKSLDEKLRNLLYQEYVPTSSASAGAPDTSVPPEQGDSEFTLSPFPEEQTPATALDRREPGCSVPDAGQELDKLEVTGVSAHPSEARGPVTSIASAPAAPAKGLLQVAPPSSGTVPQMESFQRSEEAERTAAPAPAESVTRRAAADGAMSNFHRDGSPGSCGKQAEAQESGTPAKTIGRFSVVSTQDELTLAAPQCLRFSAPPDVYLDELPSSPDAKAAVRRVQTASSVDVLCEQASSDSADEPFPRQPAAAAAQLSPPSSTATDFIKKAAAFLQRSGKGGSPGPESPNGQGAKIPTINITSFHSQSSYMSSDNDSEFEDADMKKELQNLREKHMKEIAELQTQQKNEIEALYIRLGKPLPPNLGFLHSAPPSGRRRRTSKNKLKAGKLLNPLVQQLRSGTSSTSNLSDSKDSPHKESASSQPGSPEAAAAPPGAAPAVGRAVQTQQPCSVKASLSSDICSGLGPDAADANASSGQGWTVFHQTSERVTYKSSSKPRTRFLSGPVSLSIWSTLKRLCLGKDHSSRSSTNSLVTCPEPLPQSTLQVQANNSNNKKGTFTDDLHKLVDQWTSKSVGAAQTKPSLNQLKQNQKRQDMEPKANPMQTQNETCGVNSVRTGLGSKCPVPVACPVPTGLAPGAAPSLPVPVPGPALAGAVTPCVMPVCQYGAVL…
SIO_010081: WNK2
subclass of: SO_0000673
so part of: WNK2
location: join(313974..314108,351641..351813,352782..353002,357851..358008,365034..365122,365907..366126,368592..368880,371439..371656,372205..372345,374549..374740,375760..376059,378658..378849,379873..380172,383520..383523,384984..385381,388171..388220,388817..388982,389064..389180,389333..389500,389712..389757,389934..390050,390459..390607,391664..392026,394310..394361,394807..394862,394936..394954,395061..395454,395495..395761,396229..396443,398002..398217,399171..399269,404619..404663,407146..407399,414910..415091,422854..422926,424281..424299,424840..424886)
location: region:313974-424886:1
so has part: feature:313974-314108:1:exon
so has part: feature:351641-351813:1:exon
so has part: feature:352782-353002:1:exon
so has part: feature:357851-358008:1:exon
so has part: feature:365034-365122:1:exon
so has part: feature:365907-366126:1:exon
so has part: feature:368592-368880:1:exon
so has part: feature:371439-371656:1:exon
so has part: feature:372205-372345:1:exon
so has part: feature:374549-374740:1:exon
so has part: feature:375760-376059:1:exon
so has part: feature:378658-378849:1:exon
so has part: feature:379873-380172:1:exon
so has part: feature:383520-383523:1:exon
so has part: feature:384984-385381:1:exon
so has part: feature:388171-388220:1:exon
so has part: feature:388817-388982:1:exon
so has part: feature:389064-389180:1:exon
so has part: feature:389333-389500:1:exon
so has part: feature:389712-389757:1:exon
so has part: feature:389934-390050:1:exon
so has part: feature:390459-390607:1:exon
so has part: feature:391664-392026:1:exon
so has part: feature:394310-394361:1:exon
so has part: feature:394807-394862:1:exon
so has part: feature:394936-394954:1:exon
so has part: feature:395061-395454:1:exon
so has part: feature:395495-395761:1:exon
so has part: feature:396229-396443:1:exon
so has part: feature:398002-398217:1:exon
so has part: feature:399171-399269:1:exon
so has part: feature:404619-404663:1:exon
so has part: feature:407146-407399:1:exon
so has part: feature:414910-415091:1:exon
so has part: feature:422854-422926:1:exon
so has part: feature:424281-424299:1:exon
so has part: feature:424840-424886:1:exon

XP_016156750.1
type: Protein
SIO_000068: ncbiprotein

position:313974:1
position: 313974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313974-314108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351641-351813:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:352782-353002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357851-358008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:365034-365122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365907-366126:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:368592-368880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371439-371656:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372205-372345:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374549-374740:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:375760-376059:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:378658-378849:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:379873-380172:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:383520-383523:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:384984-385381:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:388171-388220:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:388817-388982:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:389064-389180:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:389333-389500:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:389712-389757:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:389934-390050:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:390459-390607:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391664-392026:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:394310-394361:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:394807-394862:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:394936-394954:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:395061-395454:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:395495-395761:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:396229-396443:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:398002-398217:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:399171-399269:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:404619-404663:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:407146-407399:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:414910-415091:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:422854-422926:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:424281-424299:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:424840-424886:1:exon

LOC107603914
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(449389..453103)
location: region:449389-453103:-1
so has part: feature:449389-453103:-1:exon
subclass of: SO_0000011

107603914
type: Gene
SIO_000068: ncbigene

position:449389:-1
position: 449389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453103:-1
position: 453103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449389-453103:-1:exon

LOC107603914
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107603914
product: uncharacterized LOC107603914
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_001611730.1
SIO_010081: LOC107603914
subclass of: SO_0000673
so part of: LOC107603914
location: complement(join(449389..449601,450212..450379,453018..453103))
location: region:449389-453103:-1
so has part: feature:453018-453103:-1:exon
so has part: feature:450212-450379:-1:exon
so has part: feature:449389-449601:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453018-453103:-1:exon

position:453018:-1
position: 453018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:450212-450379:-1:exon

position:450212:-1
position: 450212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450379:-1
position: 450379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449389-449601:-1:exon

position:449601:-1
position: 449601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM120A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 452984..501548
location: region:452984-501548:1
so has part: feature:452984-501548:1:exon
subclass of: SO_0000010

101809347
type: Gene
SIO_000068: ncbigene

position:452984:1
position: 452984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501548:1
position: 501548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452984-501548:1:exon

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005052786.1
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(452984..453492,459770..460016,464699..464781,472436..472564,473025..473121,474230..474330,474610..474893,475554..475641,478961..479185,481493..481667,487252..487501,488323..488437,489980..490189,491046..491229,492560..492697,494089..494230,498322..498418,500929..501548)
location: region:452984-501548:1
so has part: feature:452984-453492:1:exon
so has part: feature:459770-460016:1:exon
so has part: feature:464699-464781:1:exon
so has part: feature:472436-472564:1:exon
so has part: feature:473025-473121:1:exon
so has part: feature:474230-474330:1:exon
so has part: feature:474610-474893:1:exon
so has part: feature:475554-475641:1:exon
so has part: feature:478961-479185:1:exon
so has part: feature:481493-481667:1:exon
so has part: feature:487252-487501:1:exon
so has part: feature:488323-488437:1:exon
so has part: feature:489980-490189:1:exon
so has part: feature:491046-491229:1:exon
so has part: feature:492560-492697:1:exon
so has part: feature:494089-494230:1:exon
so has part: feature:498322-498418:1:exon
so has part: feature:500929-501548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452984-453492:1:exon

position:453492:1
position: 453492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:459770-460016:1:exon

position:459770:1
position: 459770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460016:1
position: 460016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464699-464781:1:exon

position:464699:1
position: 464699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464781:1
position: 464781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:472436-472564:1:exon

position:472436:1
position: 472436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472564:1
position: 472564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:473025-473121:1:exon

position:473025:1
position: 473025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473121:1
position: 473121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:474230-474330:1:exon

position:474230:1
position: 474230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474330:1
position: 474330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:474610-474893:1:exon

position:474610:1
position: 474610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474893:1
position: 474893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:475554-475641:1:exon

position:475554:1
position: 475554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475641:1
position: 475641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:478961-479185:1:exon

position:478961:1
position: 478961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479185:1
position: 479185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:481493-481667:1:exon

position:481493:1
position: 481493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481667:1
position: 481667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:487252-487501:1:exon

position:487252:1
position: 487252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487501:1
position: 487501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:488323-488437:1:exon

position:488323:1
position: 488323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488437:1
position: 488437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:489980-490189:1:exon

position:489980:1
position: 489980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490189:1
position: 490189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:491046-491229:1:exon

position:491046:1
position: 491046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491229:1
position: 491229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:492560-492697:1:exon

position:492560:1
position: 492560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492697:1
position: 492697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:494089-494230:1:exon

position:494089:1
position: 494089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494230:1
position: 494230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:498322-498418:1:exon

position:498322:1
position: 498322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498418:1
position: 498418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:500929-501548:1:exon

position:500929:1
position: 500929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005052788.1
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(452984..453492,459770..460016,464699..464781,472436..472564,473025..473121,474230..474330,474610..474893,475554..475641,478961..479185,481493..481667,487252..487501,488323..488437,489980..490189,491046..491229,494089..494230,498322..498418,500929..501548)
location: region:452984-501548:1
so has part: feature:452984-453492:1:exon
so has part: feature:459770-460016:1:exon
so has part: feature:464699-464781:1:exon
so has part: feature:472436-472564:1:exon
so has part: feature:473025-473121:1:exon
so has part: feature:474230-474330:1:exon
so has part: feature:474610-474893:1:exon
so has part: feature:475554-475641:1:exon
so has part: feature:478961-479185:1:exon
so has part: feature:481493-481667:1:exon
so has part: feature:487252-487501:1:exon
so has part: feature:488323-488437:1:exon
so has part: feature:489980-490189:1:exon
so has part: feature:491046-491229:1:exon
so has part: feature:494089-494230:1:exon
so has part: feature:498322-498418:1:exon
so has part: feature:500929-501548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452984-453492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459770-460016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464699-464781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472436-472564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473025-473121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474230-474330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474610-474893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475554-475641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478961-479185:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481493-481667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487252-487501:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488323-488437:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:489980-490189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491046-491229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:494089-494230:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:498322-498418:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:500929-501548:1:exon

FAM120A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FAM120A
product: family with sequence similarity 120A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005052787.1
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(452984..453492,459770..460016,464699..464781,472436..472564,473025..473121,474233..474330,474610..474893,475554..475641,478961..479185,481493..481667,487252..487501,488323..488437,489980..490189,491046..491229,492560..492697,494089..494230,498322..498418,500929..501548)
location: region:452984-501548:1
so has part: feature:452984-453492:1:exon
so has part: feature:459770-460016:1:exon
so has part: feature:464699-464781:1:exon
so has part: feature:472436-472564:1:exon
so has part: feature:473025-473121:1:exon
so has part: feature:474233-474330:1:exon
so has part: feature:474610-474893:1:exon
so has part: feature:475554-475641:1:exon
so has part: feature:478961-479185:1:exon
so has part: feature:481493-481667:1:exon
so has part: feature:487252-487501:1:exon
so has part: feature:488323-488437:1:exon
so has part: feature:489980-490189:1:exon
so has part: feature:491046-491229:1:exon
so has part: feature:492560-492697:1:exon
so has part: feature:494089-494230:1:exon
so has part: feature:498322-498418:1:exon
so has part: feature:500929-501548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:452984-453492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459770-460016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464699-464781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472436-472564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473025-473121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474233-474330:1:exon

position:474233:1
position: 474233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:474610-474893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475554-475641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478961-479185:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481493-481667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487252-487501:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488323-488437:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:489980-490189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491046-491229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492560-492697:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:494089-494230:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498322-498418:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:500929-501548:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X1
translation: MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLIDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFNGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHIKVAQSIEDHHQEVIAFCREKGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTTDLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLAARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSSQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKPGTQSEGQTRGELGDQTKAEGSSSASSGSQAADVKGNQSSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVYGFGGPYGETVATGAYRAFRVAAAAGHSGAFSGNDSNRTSKFQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSLVSSDGSLAENGVVTEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDALEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(453019..453492,459770..460016,464699..464781,472436..472564,473025..473121,474230..474330,474610..474893,475554..475641,478961..479185,481493..481667,487252..487501,488323..488437,489980..490189,491046..491229,492560..492697,494089..494230,498322..498418,500929..501240)
location: region:453019-501240:1
so has part: feature:453019-453492:1:exon
so has part: feature:459770-460016:1:exon
so has part: feature:464699-464781:1:exon
so has part: feature:472436-472564:1:exon
so has part: feature:473025-473121:1:exon
so has part: feature:474230-474330:1:exon
so has part: feature:474610-474893:1:exon
so has part: feature:475554-475641:1:exon
so has part: feature:478961-479185:1:exon
so has part: feature:481493-481667:1:exon
so has part: feature:487252-487501:1:exon
so has part: feature:488323-488437:1:exon
so has part: feature:489980-490189:1:exon
so has part: feature:491046-491229:1:exon
so has part: feature:492560-492697:1:exon
so has part: feature:494089-494230:1:exon
so has part: feature:498322-498418:1:exon
so has part: feature:500929-501240:1:exon

XP_005052843.1
type: Protein
SIO_000068: ncbiprotein

position:453019:1
position: 453019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501240:1
position: 501240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453019-453492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459770-460016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464699-464781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472436-472564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473025-473121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474230-474330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474610-474893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475554-475641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478961-479185:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481493-481667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487252-487501:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488323-488437:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:489980-490189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491046-491229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492560-492697:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:494089-494230:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498322-498418:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:500929-501240:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X3
translation: MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLIDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFNGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHIKVAQSIEDHHQEVIAFCREKGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTTDLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLAARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSSQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKPGTQSEGQTRGELGDQTKAEGSSSASSGSQAADVKGNQSSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSLVSSDGSLAENGVVTEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDALEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(453019..453492,459770..460016,464699..464781,472436..472564,473025..473121,474230..474330,474610..474893,475554..475641,478961..479185,481493..481667,487252..487501,488323..488437,489980..490189,491046..491229,494089..494230,498322..498418,500929..501240)
location: region:453019-501240:1
so has part: feature:453019-453492:1:exon
so has part: feature:459770-460016:1:exon
so has part: feature:464699-464781:1:exon
so has part: feature:472436-472564:1:exon
so has part: feature:473025-473121:1:exon
so has part: feature:474230-474330:1:exon
so has part: feature:474610-474893:1:exon
so has part: feature:475554-475641:1:exon
so has part: feature:478961-479185:1:exon
so has part: feature:481493-481667:1:exon
so has part: feature:487252-487501:1:exon
so has part: feature:488323-488437:1:exon
so has part: feature:489980-490189:1:exon
so has part: feature:491046-491229:1:exon
so has part: feature:494089-494230:1:exon
so has part: feature:498322-498418:1:exon
so has part: feature:500929-501240:1:exon

XP_005052845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453019-453492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459770-460016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464699-464781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472436-472564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473025-473121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474230-474330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474610-474893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475554-475641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478961-479185:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481493-481667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487252-487501:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488323-488437:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:489980-490189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491046-491229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:494089-494230:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:498322-498418:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:500929-501240:1:exon

FAM120A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FAM120A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of PPAR-gamma-like protein 1 isoform X2
translation: MGVQGFQDYIEKHCPSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLIDADNCLHRLYGGFYTDWVSGGQWNHMLGYLAALAKACFNGNIELFVFFNGALEKARLHEWVKRQGNERQTAQQIVSHVQNKGTPPPKVWFLPPVCMAHCIRLALIRFHIKVAQSIEDHHQEVIAFCREKGFHGLVAYDSDYALCNIPYYFSAHALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLLGPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTTDLDAIAKDVFQHSQSRTDDKVTRFKRAVAYYSATNKPMPFHPPHYLARPNQFGMPGIVPPYVPSQMLNIPQTSLQAKPVAQQMSSQGGAQGQGPYPYSLSEPAITLETGGKSLSEQNNYSNIPHEGKHTPLYERSSPINPAQSGSPNHVDSTYFPASSTSSSSDNDEGNGGAVNHVSGNKIGWEKPGTQSEGQTRGELGDQTKAEGSSSASSGSQAADVKGNQSSNPQIPCLLSMPTRNHMDITTPPLPPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVRQYVYGVLFSLAESRKKTERLAFRKNRLPPEFSPVIIKEWAAYKGKSPQTPELVEALAFREWTCPNLKKLWLGKAVEDKNRRMRAFLACMRSDTPAMLNPTNVPTHLMVLCCVLRYMVQWPGVRILRRQELDAFLAQALSPKLYEPDQLQELKIENLDPRGIQLSALFMSGVDMALFANDACGQPIPWEHCCPWMYFDGKLFQTKLIKASREKVPLIDLCDGQAEQAAKVEKMRQSILEGLNFSRQNHPLPFPPPPAMPFYPASMYPRHFGPVPPPQGRGRGFAGVYGFGGPYGETVATGAYRAFRVAAAAGHSGAFSGNDSNRTSKFQGGVQPIPSQGGKLEIAGTVVGHWAGSRRGRGGRGPFPLQVVSVGGPARGRPRGVISTPVIRTFGRGGRYYGRGYKSQGAIQGKPPYAASAEEVAKELKSKSEESKSSLVSSDGSLAENGVVTEEKPASQMNGNTGDIRASNQSESALSNDSKMCNTNPHLNALNADSVCHKDDALEATVLKKEE
SIO_010081: FAM120A
subclass of: SO_0000673
so part of: FAM120A
location: join(453019..453492,459770..460016,464699..464781,472436..472564,473025..473121,474233..474330,474610..474893,475554..475641,478961..479185,481493..481667,487252..487501,488323..488437,489980..490189,491046..491229,492560..492697,494089..494230,498322..498418,500929..501240)
location: region:453019-501240:1
so has part: feature:453019-453492:1:exon
so has part: feature:459770-460016:1:exon
so has part: feature:464699-464781:1:exon
so has part: feature:472436-472564:1:exon
so has part: feature:473025-473121:1:exon
so has part: feature:474233-474330:1:exon
so has part: feature:474610-474893:1:exon
so has part: feature:475554-475641:1:exon
so has part: feature:478961-479185:1:exon
so has part: feature:481493-481667:1:exon
so has part: feature:487252-487501:1:exon
so has part: feature:488323-488437:1:exon
so has part: feature:489980-490189:1:exon
so has part: feature:491046-491229:1:exon
so has part: feature:492560-492697:1:exon
so has part: feature:494089-494230:1:exon
so has part: feature:498322-498418:1:exon
so has part: feature:500929-501240:1:exon

XP_005052844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:453019-453492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459770-460016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464699-464781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472436-472564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473025-473121:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474233-474330:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474610-474893:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475554-475641:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:478961-479185:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481493-481667:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487252-487501:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488323-488437:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:489980-490189:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:491046-491229:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:492560-492697:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:494089-494230:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498322-498418:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:500929-501240:1:exon

PHF2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 510586..567076
location: region:510586-567076:1
so has part: feature:510586-567076:1:exon
subclass of: SO_0000010

101808278
type: Gene
SIO_000068: ncbigene

position:510586:1
position: 510586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567076:1
position: 567076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510586-567076:1:exon

PHF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHF2
product: PHD finger protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052784.2
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(510586..510753,537108..537193,543471..543585,545946..546106,546602..546743,549101..549287,549841..550003,550774..550861,551387..551493,551783..551874,552261..552350,553098..553460,554230..554349,554966..555084,555422..555600,555887..555960,557031..557188,561299..561576,562536..562631,563512..563621,564899..565160,566607..567076)
location: region:510586-567076:1
so has part: feature:510586-510753:1:exon
so has part: feature:537108-537193:1:exon
so has part: feature:543471-543585:1:exon
so has part: feature:545946-546106:1:exon
so has part: feature:546602-546743:1:exon
so has part: feature:549101-549287:1:exon
so has part: feature:549841-550003:1:exon
so has part: feature:550774-550861:1:exon
so has part: feature:551387-551493:1:exon
so has part: feature:551783-551874:1:exon
so has part: feature:552261-552350:1:exon
so has part: feature:553098-553460:1:exon
so has part: feature:554230-554349:1:exon
so has part: feature:554966-555084:1:exon
so has part: feature:555422-555600:1:exon
so has part: feature:555887-555960:1:exon
so has part: feature:557031-557188:1:exon
so has part: feature:561299-561576:1:exon
so has part: feature:562536-562631:1:exon
so has part: feature:563512-563621:1:exon
so has part: feature:564899-565160:1:exon
so has part: feature:566607-567076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510586-510753:1:exon

position:510753:1
position: 510753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:537108-537193:1:exon

position:537108:1
position: 537108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537193:1
position: 537193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:543471-543585:1:exon

position:543471:1
position: 543471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543585:1
position: 543585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:545946-546106:1:exon

position:545946:1
position: 545946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546106:1
position: 546106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:546602-546743:1:exon

position:546602:1
position: 546602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546743:1
position: 546743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:549101-549287:1:exon

position:549101:1
position: 549101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549287:1
position: 549287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:549841-550003:1:exon

position:549841:1
position: 549841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550003:1
position: 550003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:550774-550861:1:exon

position:550774:1
position: 550774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550861:1
position: 550861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:551387-551493:1:exon

position:551387:1
position: 551387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551493:1
position: 551493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:551783-551874:1:exon

position:551783:1
position: 551783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551874:1
position: 551874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:552261-552350:1:exon

position:552261:1
position: 552261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552350:1
position: 552350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:553098-553460:1:exon

position:553098:1
position: 553098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553460:1
position: 553460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:554230-554349:1:exon

position:554230:1
position: 554230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554349:1
position: 554349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:554966-555084:1:exon

position:554966:1
position: 554966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555084:1
position: 555084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:555422-555600:1:exon

position:555422:1
position: 555422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555600:1
position: 555600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:555887-555960:1:exon

position:555887:1
position: 555887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555960:1
position: 555960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:557031-557188:1:exon

position:557031:1
position: 557031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557188:1
position: 557188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:561299-561576:1:exon

position:561299:1
position: 561299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561576:1
position: 561576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:562536-562631:1:exon

position:562536:1
position: 562536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562631:1
position: 562631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:563512-563621:1:exon

position:563512:1
position: 563512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563621:1
position: 563621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:564899-565160:1:exon

position:564899:1
position: 564899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565160:1
position: 565160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:566607-567076:1:exon

position:566607:1
position: 566607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHF2
product: PHD finger protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005052785.2
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(510586..510753,537108..537193,543471..543585,545946..546106,546602..546743,549101..549287,549841..550003,550774..550861,551387..551493,551783..551874,552261..552350,553098..553460,554230..554349,554966..555084,555422..555600,555887..555960,557031..557188,561299..561576,562536..562631,563512..563621,566607..567076)
location: region:510586-567076:1
so has part: feature:510586-510753:1:exon
so has part: feature:537108-537193:1:exon
so has part: feature:543471-543585:1:exon
so has part: feature:545946-546106:1:exon
so has part: feature:546602-546743:1:exon
so has part: feature:549101-549287:1:exon
so has part: feature:549841-550003:1:exon
so has part: feature:550774-550861:1:exon
so has part: feature:551387-551493:1:exon
so has part: feature:551783-551874:1:exon
so has part: feature:552261-552350:1:exon
so has part: feature:553098-553460:1:exon
so has part: feature:554230-554349:1:exon
so has part: feature:554966-555084:1:exon
so has part: feature:555422-555600:1:exon
so has part: feature:555887-555960:1:exon
so has part: feature:557031-557188:1:exon
so has part: feature:561299-561576:1:exon
so has part: feature:562536-562631:1:exon
so has part: feature:563512-563621:1:exon
so has part: feature:566607-567076:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510586-510753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537108-537193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543471-543585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545946-546106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:546602-546743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549101-549287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549841-550003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550774-550861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:551387-551493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:551783-551874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:552261-552350:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:553098-553460:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:554230-554349:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:554966-555084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:555422-555600:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555887-555960:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:557031-557188:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:561299-561576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:562536-562631:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:563512-563621:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:566607-567076:1:exon

PHF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase PHF2 isoform X1
translation: MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRNWHKHDTGQTTEVKPVQNGSQVFIKELRSRTFPSAEDIVVKVPGSQLTAEYLEEKGFAEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPASANISLYERWQSAANHSEMFFADQVDKCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSMEMQMRAYEVERRLKIVSLTQFPNFETACWYMGKHLLEKFKGLHKAGQQPPAHLLQGAKILNGAFRSWTKKQALAEHEDELPENFKPAQLIKDLAKEIRLSENASKASKADLSATPTAEEICPVEKEEAPSPAQATPLPPPVEKLPKKKTPKTVKTPKQLKPSKPPKPPKPPKPPKAPKVKGEGKKKGKKAKESPPPAIPNLDLLEAHTKEALTKIETPKKGKAAKNVLSVPNKESASKQNEVEKFEVREQNKSKTEAKWKYKNSKPDSLLKMEEEHKSEKTPLPGNKDNKFTFSFSNKKLLGSKGVKTHLNTSVFGSLQNFKEDKSKPVRDEYEYVSDDGELKIDEFPIRRKKNTAKRELPFLSDKKEALQHTPVKKPKVESAPYKSEDSSDEDLLHIDTEAKPGRNSKVKKESGSSAGILDLLQASKEVGGLEYNTNSQPPASPSTQEAIQGMLSMANLQASESCLQTSWGTNQAKNNSFSTQNSKKPGGGGNRNAGKRLLKKSTKNSVDVEDYDEDQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKSSDDAPYSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKGKKKKNTKKKLSAPNASQAAEEGSSPEPKLEAQASSLTDHEYTAGASTFGVAQPNRGSQPMAPGVFLTQRRPSSSSQNNASAKGKRTKKGMATAKQRLGKILKIHRNGKLLL
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(510656..510753,537108..537193,543471..543585,545946..546106,546602..546743,549101..549287,549841..550003,550774..550861,551387..551493,551783..551874,552261..552350,553098..553460,554230..554349,554966..555084,555422..555600,555887..555960,557031..557188,561299..561576,562536..562631,563512..563621,564899..565160,566607..566695)
location: region:510656-566695:1
so has part: feature:510656-510753:1:exon
so has part: feature:537108-537193:1:exon
so has part: feature:543471-543585:1:exon
so has part: feature:545946-546106:1:exon
so has part: feature:546602-546743:1:exon
so has part: feature:549101-549287:1:exon
so has part: feature:549841-550003:1:exon
so has part: feature:550774-550861:1:exon
so has part: feature:551387-551493:1:exon
so has part: feature:551783-551874:1:exon
so has part: feature:552261-552350:1:exon
so has part: feature:553098-553460:1:exon
so has part: feature:554230-554349:1:exon
so has part: feature:554966-555084:1:exon
so has part: feature:555422-555600:1:exon
so has part: feature:555887-555960:1:exon
so has part: feature:557031-557188:1:exon
so has part: feature:561299-561576:1:exon
so has part: feature:562536-562631:1:exon
so has part: feature:563512-563621:1:exon
so has part: feature:564899-565160:1:exon
so has part: feature:566607-566695:1:exon

XP_005052841.1
type: Protein
SIO_000068: ncbiprotein

position:510656:1
position: 510656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566695:1
position: 566695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510656-510753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537108-537193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543471-543585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545946-546106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:546602-546743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549101-549287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549841-550003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550774-550861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:551387-551493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:551783-551874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:552261-552350:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:553098-553460:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:554230-554349:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:554966-555084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:555422-555600:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555887-555960:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:557031-557188:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:561299-561576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:562536-562631:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:563512-563621:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:564899-565160:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:566607-566695:1:exon

PHF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase PHF2 isoform X2
translation: MATVPVYCICRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRNWHKHDTGQTTEVKPVQNGSQVFIKELRSRTFPSAEDIVVKVPGSQLTAEYLEEKGFAEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKIFYLIKPASANISLYERWQSAANHSEMFFADQVDKCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSMEMQMRAYEVERRLKIVSLTQFPNFETACWYMGKHLLEKFKGLHKAGQQPPAHLLQGAKILNGAFRSWTKKQALAEHEDELPENFKPAQLIKDLAKEIRLSENASKASKADLSATPTAEEICPVEKEEAPSPAQATPLPPPVEKLPKKKTPKTVKTPKQLKPSKPPKPPKPPKPPKAPKVKGEGKKKGKKAKESPPPAIPNLDLLEAHTKEALTKIETPKKGKAAKNVLSVPNKESASKQNEVEKFEVREQNKSKTEAKWKYKNSKPDSLLKMEEEHKSEKTPLPGNKDNKFTFSFSNKKLLGSKGVKTHLNTSVFGSLQNFKEDKSKPVRDEYEYVSDDGELKIDEFPIRRKKNTAKRELPFLSDKKEALQHTPVKKPKVESAPYKSEDSSDEDLLHIDTEAKPGRNSKVKKESGSSAGILDLLQASKEVGGLEYNTNSQPPASPSTQEAIQGMLSMANLQASESCLQTSWGTNQAKNNSFSTQNSKKPGGGGNRNAGKRLLKKSTKNSVDVEDYDEDQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKSSDDAPYSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQGSVRRRGWPRPSSGSARS
SIO_010081: PHF2
subclass of: SO_0000673
so part of: PHF2
location: join(510656..510753,537108..537193,543471..543585,545946..546106,546602..546743,549101..549287,549841..550003,550774..550861,551387..551493,551783..551874,552261..552350,553098..553460,554230..554349,554966..555084,555422..555600,555887..555960,557031..557188,561299..561576,562536..562631,563512..563621,566607..566663)
location: region:510656-566663:1
so has part: feature:510656-510753:1:exon
so has part: feature:537108-537193:1:exon
so has part: feature:543471-543585:1:exon
so has part: feature:545946-546106:1:exon
so has part: feature:546602-546743:1:exon
so has part: feature:549101-549287:1:exon
so has part: feature:549841-550003:1:exon
so has part: feature:550774-550861:1:exon
so has part: feature:551387-551493:1:exon
so has part: feature:551783-551874:1:exon
so has part: feature:552261-552350:1:exon
so has part: feature:553098-553460:1:exon
so has part: feature:554230-554349:1:exon
so has part: feature:554966-555084:1:exon
so has part: feature:555422-555600:1:exon
so has part: feature:555887-555960:1:exon
so has part: feature:557031-557188:1:exon
so has part: feature:561299-561576:1:exon
so has part: feature:562536-562631:1:exon
so has part: feature:563512-563621:1:exon
so has part: feature:566607-566663:1:exon

XP_005052842.1
type: Protein
SIO_000068: ncbiprotein

position:566663:1
position: 566663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510656-510753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537108-537193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543471-543585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:545946-546106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:546602-546743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:549101-549287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:549841-550003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550774-550861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:551387-551493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:551783-551874:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:552261-552350:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:553098-553460:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:554230-554349:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:554966-555084:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:555422-555600:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555887-555960:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:557031-557188:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:561299-561576:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:562536-562631:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:563512-563621:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:566607-566663:1:exon

BARX1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: BARX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(701528..>703214)
location: region:701528-703214:-1
so has part: feature:701528-703214:-1:exon
subclass of: SO_0000010

101812379
type: Gene
SIO_000068: ncbigene

position:701528:-1
position: 701528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703214:-1
position: 703214
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701528-703214:-1:exon

BARX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: BARX1
product: BARX homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301265.1
SIO_010081: BARX1
subclass of: SO_0000673
so part of: BARX1
location: complement(join(701528..702008,702432..702516,702664..702794,702915..>703214))
location: region:701528-703214:-1
so has part: feature:702915-703214:-1:exon
so has part: feature:702664-702794:-1:exon
so has part: feature:702432-702516:-1:exon
so has part: feature:701528-702008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702915-703214:-1:exon

position:702915:-1
position: 702915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:702664-702794:-1:exon

position:702664:-1
position: 702664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702794:-1
position: 702794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:702432-702516:-1:exon

position:702432:-1
position: 702432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702516:-1
position: 702516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:701528-702008:-1:exon

position:702008:-1
position: 702008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BARX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: BARX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 1
translation: RNSVITVCWLKGKTRPLRRWRKRGLRTRGVPRSEEKGPGLLAGAPCSPGGPCALPAAHRRSLPPAAVLKAEPAAVFKFPLAPLGCSGLGSALLAAGSGLGLEPGAPEPGKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPSSEQLSEQERARDAEKPPESLGSPAEVSQEE
SIO_010081: BARX1
subclass of: SO_0000673
so part of: BARX1
location: complement(join(701844..702008,702432..702516,702664..702794,702915..>703214))
location: region:701844-703214:-1
so has part: feature:702915-703214:-1:exon
so has part: feature:702664-702794:-1:exon
so has part: feature:702432-702516:-1:exon
so has part: feature:701844-702008:-1:exon

XP_016156751.1
type: Protein
SIO_000068: ncbiprotein

position:701844:-1
position: 701844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702915-703214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:702664-702794:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:702432-702516:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:701844-702008:-1:exon

PTPDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 726253..747068
location: region:726253-747068:1
so has part: feature:726253-747068:1:exon
subclass of: SO_0000010

101807842
type: Gene
SIO_000068: ncbigene

position:726253:1
position: 726253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747068:1
position: 747068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726253-747068:1:exon

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005052779.2
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(726253..726425,726776..726846,737010..737102,739765..739936,740610..740690,740913..741031,741782..741919,742591..743795,744518..744703,745433..745543,746333..747068)
location: region:726253-747068:1
so has part: feature:726253-726425:1:exon
so has part: feature:726776-726846:1:exon
so has part: feature:737010-737102:1:exon
so has part: feature:739765-739936:1:exon
so has part: feature:740610-740690:1:exon
so has part: feature:740913-741031:1:exon
so has part: feature:741782-741919:1:exon
so has part: feature:742591-743795:1:exon
so has part: feature:744518-744703:1:exon
so has part: feature:745433-745543:1:exon
so has part: feature:746333-747068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726253-726425:1:exon

position:726425:1
position: 726425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726776-726846:1:exon

position:726776:1
position: 726776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726846:1
position: 726846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:737010-737102:1:exon

position:737010:1
position: 737010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:737102:1
position: 737102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:739765-739936:1:exon

position:739765:1
position: 739765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739936:1
position: 739936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:740610-740690:1:exon

position:740610:1
position: 740610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740690:1
position: 740690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:740913-741031:1:exon

position:740913:1
position: 740913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741031:1
position: 741031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:741782-741919:1:exon

position:741782:1
position: 741782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741919:1
position: 741919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:742591-743795:1:exon

position:742591:1
position: 742591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743795:1
position: 743795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:744518-744703:1:exon

position:744518:1
position: 744518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744703:1
position: 744703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:745433-745543:1:exon

position:745433:1
position: 745433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745543:1
position: 745543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:746333-747068:1:exon

position:746333:1
position: 746333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PTPDC1
product: protein tyrosine phosphatase domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052778.2
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(737018..737102,738778..739283,739765..739936,740610..740690,740913..741031,741782..741919,742591..743795,744518..744703,745433..745543,746333..747068)
location: region:737018-747068:1
so has part: feature:737018-737102:1:exon
so has part: feature:738778-739283:1:exon
so has part: feature:739765-739936:1:exon
so has part: feature:740610-740690:1:exon
so has part: feature:740913-741031:1:exon
so has part: feature:741782-741919:1:exon
so has part: feature:742591-743795:1:exon
so has part: feature:744518-744703:1:exon
so has part: feature:745433-745543:1:exon
so has part: feature:746333-747068:1:exon

position:737018:1
position: 737018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737018-737102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:738778-739283:1:exon

position:738778:1
position: 738778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739283:1
position: 739283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:739765-739936:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740610-740690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:740913-741031:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:741782-741919:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:742591-743795:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:744518-744703:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:745433-745543:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:746333-747068:1:exon

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1 isoform X1
translation: MAAGVLLQNEQPYSSLIESSVYLANMSSGSSRRPTAKYTKVGERLRHVIPGHMQCSMACGGRACKYENPARWAEHEQALTGLYSSWITDNILAMARPSTELIEKYNIIEQFERCGIKSIINLQRPGEHASCGNPLEPESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMSFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCVREFSQFLVPLRNVFACCEPKAHAVTLSQYLTRQRHLLHGYESRLLKYVPKLIHLVCKLLLDLAENRQVVEAELLDIPDLSAEIERTVSQLESMELEQELARHDSDASDSSHTHSSALDTQDSHFSLGHECDSFCKRRNVECLQPLTHLRRRLSYSESDLRRAEFLLEQDDTAWTVPAQILANNKAKQNSGEESSASGEATPQLELNKEALVRNTCMFWSQGRFNLDGRRDGSYHRRNSTKEVQRSRTFSSGLASIHNPKEPEMPRHSFAKETTHSKAYKTNIYGRRVYLSEDSDSSSSSSRVNFSIGYESQGSREVSETIPHIVLQSELSLEARRVLAAKALADINEFLGEDEVKQKVEMWQKELNSQDGAWDKICTERDPFILCSLMWSWIEQLKEPIISKDDIDMLAKNCTESQNALHLLRKEQCQTILCILHCVVNLQVLPADVEEALLDRAIKAFTKTSFNSENGPYVYNTLKTVLKQALEEKRKRIKEGQENPS
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(737018..737102,739765..739936,740610..740690,740913..741031,741782..741919,742591..743795,744518..744703,745433..745543,746333..746449)
location: region:737018-746449:1
so has part: feature:737018-737102:1:exon
so has part: feature:739765-739936:1:exon
so has part: feature:740610-740690:1:exon
so has part: feature:740913-741031:1:exon
so has part: feature:741782-741919:1:exon
so has part: feature:742591-743795:1:exon
so has part: feature:744518-744703:1:exon
so has part: feature:745433-745543:1:exon
so has part: feature:746333-746449:1:exon

XP_005052836.1
type: Protein
SIO_000068: ncbiprotein

position:746449:1
position: 746449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737018-737102:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739765-739936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740610-740690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740913-741031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741782-741919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742591-743795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744518-744703:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:745433-745543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746333-746449:1:exon

PTPDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PTPDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein tyrosine phosphatase domain-containing protein 1 isoform X2
translation: MQPSPRRRSAVSLFSHFFQGRRHSSSDPLLRLSQRRRSSVVELLSSSTHRVMVALSSLSPEELDATFPEKKRSSRRPTAKYTKVGERLRHVIPGHMQCSMACGGRACKYENPARWAEHEQALTGLYSSWITDNILAMARPSTELIEKYNIIEQFERCGIKSIINLQRPGEHASCGNPLEPESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMSFALQEGRVAVHCHAGLGRTGVLIACYLVFATRMSADQAILFVRAKRPNSIQTRGQLLCVREFSQFLVPLRNVFACCEPKAHAVTLSQYLTRQRHLLHGYESRLLKYVPKLIHLVCKLLLDLAENRQVVEAELLDIPDLSAEIERTVSQLESMELEQELARHDSDASDSSHTHSSALDTQDSHFSLGHECDSFCKRRNVECLQPLTHLRRRLSYSESDLRRAEFLLEQDDTAWTVPAQILANNKAKQNSGEESSASGEATPQLELNKEALVRNTCMFWSQGRFNLDGRRDGSYHRRNSTKEVQRSRTFSSGLASIHNPKEPEMPRHSFAKETTHSKAYKTNIYGRRVYLSEDSDSSSSSSRVNFSIGYESQGSREVSETIPHIVLQSELSLEARRVLAAKALADINEFLGEDEVKQKVEMWQKELNSQDGAWDKICTERDPFILCSLMWSWIEQLKEPIISKDDIDMLAKNCTESQNALHLLRKEQCQTILCILHCVVNLQVLPADVEEALLDRAIKAFTKTSFNSENGPYVYNTLKTVLKQALEEKRKRIKEGQENPS
SIO_010081: PTPDC1
subclass of: SO_0000673
so part of: PTPDC1
location: join(739070..739283,739765..739936,740610..740690,740913..741031,741782..741919,742591..743795,744518..744703,745433..745543,746333..746449)
location: region:739070-746449:1
so has part: feature:739070-739283:1:exon
so has part: feature:739765-739936:1:exon
so has part: feature:740610-740690:1:exon
so has part: feature:740913-741031:1:exon
so has part: feature:741782-741919:1:exon
so has part: feature:742591-743795:1:exon
so has part: feature:744518-744703:1:exon
so has part: feature:745433-745543:1:exon
so has part: feature:746333-746449:1:exon

XP_005052835.1
type: Protein
SIO_000068: ncbiprotein

position:739070:1
position: 739070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:739070-739283:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:739765-739936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740610-740690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740913-741031:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:741782-741919:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742591-743795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744518-744703:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:745433-745543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:746333-746449:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 759968..764967
location: region:759968-764967:1
so has part: feature:759968-764967:1:region

position:759968:1
position: 759968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764967:1
position: 764967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759968-764967:1:region

WNT7A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: WNT7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 809258..852494
location: region:809258-852494:1
so has part: feature:809258-852494:1:exon
subclass of: SO_0000010

101813299
type: Gene
SIO_000068: ncbigene

position:809258:1
position: 809258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852494:1
position: 852494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809258-852494:1:exon

WNT7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WNT7A
product: Wnt family member 7A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301463.1
SIO_010081: WNT7A
subclass of: SO_0000673
so part of: WNT7A
location: join(809258..809431,815606..815832,829553..829824,850876..852494)
location: region:809258-852494:1
so has part: feature:809258-809431:1:exon
so has part: feature:815606-815832:1:exon
so has part: feature:829553-829824:1:exon
so has part: feature:850876-852494:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:809258-809431:1:exon

position:809431:1
position: 809431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:815606-815832:1:exon

position:815606:1
position: 815606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815832:1
position: 815832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:829553-829824:1:exon

position:829553:1
position: 829553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829824:1
position: 829824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:850876-852494:1:exon

position:850876:1
position: 850876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNT7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WNT7A
product: Wnt family member 7A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016301462.1
SIO_010081: WNT7A
subclass of: SO_0000673
so part of: WNT7A
location: join(809258..809431,815070..815192,815729..815832,829553..829824,850876..852493)
location: region:809258-852493:1
so has part: feature:809258-809431:1:exon
so has part: feature:815070-815192:1:exon
so has part: feature:815729-815832:1:exon
so has part: feature:829553-829824:1:exon
so has part: feature:850876-852493:1:exon

position:852493:1
position: 852493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809258-809431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815070-815192:1:exon

position:815070:1
position: 815070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815192:1
position: 815192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:815729-815832:1:exon

position:815729:1
position: 815729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:829553-829824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850876-852493:1:exon

WNT7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WNT7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-7a isoform X1
translation: MNRKTRRWIFHIFLSLGIVYIKIGGFSSVVALGASIICNKIPGLAPRQRAICQSRPDAIIVIGEGSQMGINECQFQFRNGRWNCSALGERTVFGKELKVGSREAAFTYAIIAAGVAHAITAACTQGNLSDCGCDKEKQGQYHKEEGWKWGGCSADIRYGIGFAKVFVDAREIKQNARTLMNLHNNEAGRKILEENMKLECKCHGVSGSCTTKTCWTTLPKFRELGYILKDKYNEAVQVEPVRASRNKRPTFLKIKKPLSYRKPMDTDLVYIEKSPNYCEEDPVTGSVGTQGRMCNKTAQQSNGCDLMCCGRGYNTHQYSRVWQCNCKFHWCCYVKCNTCSERTEVYTCK
SIO_010081: WNT7A
subclass of: SO_0000673
so part of: WNT7A
location: join(809361..809431,815070..815192,815729..815832,829553..829824,850876..851355)
location: region:809361-851355:1
so has part: feature:809361-809431:1:exon
so has part: feature:815070-815192:1:exon
so has part: feature:815729-815832:1:exon
so has part: feature:829553-829824:1:exon
so has part: feature:850876-851355:1:exon

XP_016156948.1
type: Protein
SIO_000068: ncbiprotein

position:809361:1
position: 809361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851355:1
position: 851355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809361-809431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815070-815192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815729-815832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:829553-829824:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:850876-851355:1:exon

WNT7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WNT7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-7a isoform X2
translation: MNRKTRRWIFHIFLSLGIVYIKIGGFSSVVALGASIICNKIPGLAPRQRAICQSRPDAIIVIGEGSQMGINECQFQFRNGRWNCSALGERTVFGKELKVGSREAAFTYAIIAAGVAHAITAACTQGNLSDCGCDKEKQGQYHKEEGWKWGGCSADIRYGIGFAKVFVDAREIKQNARTLMNLHNNEAGRKILEENMKLECKCHGVSGSCTTKTCWTTLPKFRELGYILKDKYNEAVQVEPVRASRNKRPTFLKIKKPLSYRKPMDTDLVYIEKSPNYCEEDPVTGSVGTQGRMCNKTAQQSNGCDLMCCGRGYNTHQYSRVWQCNCKFHWCCYVKCNTCSERTEVYTCK
SIO_010081: WNT7A
subclass of: SO_0000673
so part of: WNT7A
location: join(809361..809431,815606..815832,829553..829824,850876..851355)
location: region:809361-851355:1
so has part: feature:809361-809431:1:exon
so has part: feature:815606-815832:1:exon
so has part: feature:829553-829824:1:exon
so has part: feature:850876-851355:1:exon

XP_016156949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:809361-809431:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815606-815832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829553-829824:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:850876-851355:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 809691..814690
location: region:809691-814690:1
so has part: feature:809691-814690:1:region

position:809691:1
position: 809691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814690:1
position: 814690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809691-814690:1:region

FBLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(988413..1081975)
location: region:988413-1081975:-1
so has part: feature:988413-1081975:-1:exon
subclass of: SO_0000010

101813494
type: Gene
SIO_000068: ncbigene

position:988413:-1
position: 988413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081975:-1
position: 1081975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988413-1081975:-1:exon

FBLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FBLN2
product: fibulin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301435.1
SIO_010081: FBLN2
subclass of: SO_0000673
so part of: FBLN2
location: complement(join(988413..990185,993975..994098,996587..996715,997686..997802,998399..998524,999789..999917,1003489..1003632,1003922..1004059,1005163..1005297,1010705..1010845,1012339..1012440,1012907..1013020,1014991..1015197,1017327..1017513,1021680..1021809,1027091..1027202,1062431..1062937,1065677..1066606,1081847..1081975))
location: region:988413-1081975:-1
so has part: feature:1081847-1081975:-1:exon
so has part: feature:1065677-1066606:-1:exon
so has part: feature:1062431-1062937:-1:exon
so has part: feature:1027091-1027202:-1:exon
so has part: feature:1021680-1021809:-1:exon
so has part: feature:1017327-1017513:-1:exon
so has part: feature:1014991-1015197:-1:exon
so has part: feature:1012907-1013020:-1:exon
so has part: feature:1012339-1012440:-1:exon
so has part: feature:1010705-1010845:-1:exon
so has part: feature:1005163-1005297:-1:exon
so has part: feature:1003922-1004059:-1:exon
so has part: feature:1003489-1003632:-1:exon
so has part: feature:999789-999917:-1:exon
so has part: feature:998399-998524:-1:exon
so has part: feature:997686-997802:-1:exon
so has part: feature:996587-996715:-1:exon
so has part: feature:993975-994098:-1:exon
so has part: feature:988413-990185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1081847-1081975:-1:exon

position:1081847:-1
position: 1081847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1065677-1066606:-1:exon

position:1065677:-1
position: 1065677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066606:-1
position: 1066606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1062431-1062937:-1:exon

position:1062431:-1
position: 1062431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062937:-1
position: 1062937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1027091-1027202:-1:exon

position:1027091:-1
position: 1027091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027202:-1
position: 1027202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1021680-1021809:-1:exon

position:1021680:-1
position: 1021680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021809:-1
position: 1021809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1017327-1017513:-1:exon

position:1017327:-1
position: 1017327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017513:-1
position: 1017513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1014991-1015197:-1:exon

position:1014991:-1
position: 1014991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015197:-1
position: 1015197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1012907-1013020:-1:exon

position:1012907:-1
position: 1012907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013020:-1
position: 1013020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1012339-1012440:-1:exon

position:1012339:-1
position: 1012339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012440:-1
position: 1012440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1010705-1010845:-1:exon

position:1010705:-1
position: 1010705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010845:-1
position: 1010845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1005163-1005297:-1:exon

position:1005163:-1
position: 1005163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005297:-1
position: 1005297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1003922-1004059:-1:exon

position:1003922:-1
position: 1003922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004059:-1
position: 1004059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1003489-1003632:-1:exon

position:1003489:-1
position: 1003489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003632:-1
position: 1003632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:999789-999917:-1:exon

position:999789:-1
position: 999789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999917:-1
position: 999917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:998399-998524:-1:exon

position:998399:-1
position: 998399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998524:-1
position: 998524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:997686-997802:-1:exon

position:997686:-1
position: 997686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997802:-1
position: 997802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:996587-996715:-1:exon

position:996587:-1
position: 996587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996715:-1
position: 996715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:993975-994098:-1:exon

position:993975:-1
position: 993975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994098:-1
position: 994098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:988413-990185:-1:exon

position:990185:-1
position: 990185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FBLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibulin-2
translation: MRKGDSGKRRRFGAEAPAPQERGQGRRCEAGAEPRCLGRTMARARSRRPSPWDALLLLLLLAGGCRAQGDCTGAECQPLENCIEDVLEPGECCATCLQHGCTCEGYQYYDCVNVGFVNGKVPEGQSYFVDFGSTECSCPKGGGKISCQFMLCPELPPNCIDAVVPADGCPQCGRIGCLHEGQKYVAGHTFHMPPCKVCHCPNAGGELMCYQLPDCDAFSSNTASPGDAEDGEPERHYDDPYSYDQEASEGDAAQVEAPKKYRSYSSHLEHESLSQEQAEDYDYLAASVAPSAPAAARPHSEGTAAPGPRGGGGGGGGGERGRRRPRTTAPSLRQGTHSQAPATAGAPPHSTAATTEAPQRPEQLEGRPKGGKERHEQERAPHSKMKKHARKEEPENSVYQGLREVNFTEPSSARPSHESLEGNDFPKVKFSATTSPPVALEEERSQSSPKQSQTLYRYHPEEDGDPNSIHASPRLPEGSTKELIESCCGAGQQWAIDNGECTEIPVSGMDGDICRIAQKQCCVATVRENSCLAGMLAAKDGDTCGPEDSDPCAGSSYKQCCDCCSLGLRLRSEGKSCESNINLGYPCSHVLLSCCEGGDRFVQPEIRRHPEPLPTATPEKVSEREDHHEALSISSEAELSNSLPGDDLDECLLYGGELCQHLCINTVGSYKCSCFPDFTLQEDGTSCSPDPDRGQVTREAEATIPPIASPSQPILVVSLQEEQDKCKDNGPCKHLCNIVEGDAVCSCMAGYTLMADGVSCEDLDECLTGAQACSSGQLCENTLGSFSCVSPSGMCAEGFILNRHRRCVDINECVTERHTCQRREHCVNTVGSFRCLQELSCQPGHELKDGECVDIDECERGTHSCKVNFVCQNTEGSFYCESKQRCMDGFLQDPEGNCVDINECTSLPEPCKPGFNCINTVGSYTCQRNTLSCSRGYHSNEEGTRCVDVDECQTGVHRCGEGQLCHNLPGGYRCDCKMGYQYDSFSRSCIDINECWNYPGRLCQHTCENTPGSYHCSCSSGFRLSYDSKHCEDVNECDNSPCSQECANVYGSYQCYCRQGFQLAEDGHSCKDIDECTQSAGILCTFRCLNVPGSYQCACPEQGYTMAANGRTCRDIDECAIGTHNCSAAETCYNIQGSFRCLSFECPSNYRKVSDMRCERISCFNYLECQSSPVRITYYQLNFQTNIAVPAHIFRIGPSPAYAGDSIALTITKGNEEGFFSSRRLNAYTGIVYLQRQLREPRDFLLDVEMKLWRQGTYTTFLARIYIFITAHAY
SIO_010081: FBLN2
subclass of: SO_0000673
so part of: FBLN2
location: complement(join(989828..990185,993975..994098,996587..996715,997686..997802,998399..998524,999789..999917,1003489..1003632,1003922..1004059,1005163..1005297,1010705..1010845,1012339..1012440,1012907..1013020,1014991..1015197,1017327..1017513,1021680..1021809,1027091..1027202,1062431..1062937,1065677..1066601))
location: region:989828-1066601:-1
so has part: feature:1065677-1066601:-1:exon
so has part: feature:1062431-1062937:-1:exon
so has part: feature:1027091-1027202:-1:exon
so has part: feature:1021680-1021809:-1:exon
so has part: feature:1017327-1017513:-1:exon
so has part: feature:1014991-1015197:-1:exon
so has part: feature:1012907-1013020:-1:exon
so has part: feature:1012339-1012440:-1:exon
so has part: feature:1010705-1010845:-1:exon
so has part: feature:1005163-1005297:-1:exon
so has part: feature:1003922-1004059:-1:exon
so has part: feature:1003489-1003632:-1:exon
so has part: feature:999789-999917:-1:exon
so has part: feature:998399-998524:-1:exon
so has part: feature:997686-997802:-1:exon
so has part: feature:996587-996715:-1:exon
so has part: feature:993975-994098:-1:exon
so has part: feature:989828-990185:-1:exon

XP_016156921.1
type: Protein
SIO_000068: ncbiprotein

position:989828:-1
position: 989828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066601:-1
position: 1066601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1065677-1066601:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1062431-1062937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1027091-1027202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1021680-1021809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1017327-1017513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014991-1015197:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1012907-1013020:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1012339-1012440:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1010705-1010845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1005163-1005297:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1003922-1004059:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1003489-1003632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:999789-999917:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:998399-998524:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:997686-997802:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:996587-996715:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:993975-994098:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:989828-990185:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 1138722..1143721
location: region:1138722-1143721:1
so has part: feature:1138722-1143721:1:region

position:1138722:1
position: 1138722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143721:1
position: 1143721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1138722-1143721:1:region

HDAC11
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1169571..1190455)
location: region:1169571-1190455:-1
so has part: feature:1169571-1190455:-1:exon
subclass of: SO_0000010

101818993
type: Gene
SIO_000068: ncbigene

position:1169571:-1
position: 1169571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190455:-1
position: 1190455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1169571-1190455:-1:exon

HDAC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HDAC11
product: histone deacetylase 11, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052843.2
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1169571..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187498..1187640,1189674..1189822,1190344..1190455))
location: region:1169571-1190455:-1
so has part: feature:1190344-1190455:-1:exon
so has part: feature:1189674-1189822:-1:exon
so has part: feature:1187498-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1169571-1171756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1190344-1190455:-1:exon

position:1190344:-1
position: 1190344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189674-1189822:-1:exon

position:1189674:-1
position: 1189674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189822:-1
position: 1189822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1187498-1187640:-1:exon

position:1187498:-1
position: 1187498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187640:-1
position: 1187640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1183399-1183515:-1:exon

position:1183399:-1
position: 1183399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183515:-1
position: 1183515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1181283-1181325:-1:exon

position:1181283:-1
position: 1181283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181325:-1
position: 1181325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1181059-1181135:-1:exon

position:1181059:-1
position: 1181059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181135:-1
position: 1181135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1179749-1179811:-1:exon

position:1179749:-1
position: 1179749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179811:-1
position: 1179811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1177794-1177890:-1:exon

position:1177794:-1
position: 1177794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177890:-1
position: 1177890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1174827-1175005:-1:exon

position:1174827:-1
position: 1174827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175005:-1
position: 1175005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1169571-1171756:-1:exon

position:1171756:-1
position: 1171756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HDAC11
product: histone deacetylase 11, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005052844.2
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1169571..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187540..1187640,1189674..1189822,1190344..1190454))
location: region:1169571-1190454:-1
so has part: feature:1190344-1190454:-1:exon
so has part: feature:1189674-1189822:-1:exon
so has part: feature:1187540-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1169571-1171756:-1:exon

position:1190454:-1
position: 1190454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190344-1190454:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1189674-1189822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187540-1187640:-1:exon

position:1187540:-1
position: 1187540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1169571-1171756:-1:exon

HDAC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HDAC11
product: histone deacetylase 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005052840.2
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1169571..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187498..1187640,1189674..1189822,1190284..1190430))
location: region:1169571-1190430:-1
so has part: feature:1190284-1190430:-1:exon
so has part: feature:1189674-1189822:-1:exon
so has part: feature:1187498-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1169571-1171756:-1:exon

position:1190430:-1
position: 1190430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190284-1190430:-1:exon

position:1190284:-1
position: 1190284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189674-1189822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187498-1187640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1169571-1171756:-1:exon

HDAC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HDAC11
product: histone deacetylase 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005052839.2
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1169571..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187498..1187640,1189674..1189822,1189920..1190430))
location: region:1169571-1190430:-1
so has part: feature:1189920-1190430:-1:exon
so has part: feature:1189674-1189822:-1:exon
so has part: feature:1187498-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1169571-1171756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1189920-1190430:-1:exon

position:1189920:-1
position: 1189920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1189674-1189822:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187498-1187640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1169571-1171756:-1:exon

HDAC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HDAC11
product: histone deacetylase 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016301465.1
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1169571..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187540..1187640,1189674..1190429))
location: region:1169571-1190429:-1
so has part: feature:1189674-1190429:-1:exon
so has part: feature:1187540-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1169571-1171756:-1:exon

position:1190429:-1
position: 1190429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1189674-1190429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187540-1187640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1169571-1171756:-1:exon

HDAC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HDAC11
product: histone deacetylase 11, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005052842.2
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1169571..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187498..1187605,1189674..1189703))
location: region:1169571-1189703:-1
so has part: feature:1189674-1189703:-1:exon
so has part: feature:1187498-1187605:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1169571-1171756:-1:exon

position:1189703:-1
position: 1189703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1189674-1189703:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187498-1187605:-1:exon

position:1187605:-1
position: 1187605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1169571-1171756:-1:exon

HDAC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 11 isoform X2
translation: MGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVAFLPNFVVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIIDLDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRRVELEWGTEDAEYLQKVQTHVEGALNEFQPDIVVYNAGTDVLDGDPLGGLAISPQGIVKRDEVVFRAARSRGVPVLMVTSGGYQKRTARIIADSILNLHGLGLLAGGQAACALGSPSLDQMVRDSAKDFSNLSLQ
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1171514..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187540..1187640,1189674..1189740))
location: region:1171514-1189740:-1
so has part: feature:1189674-1189740:-1:exon
so has part: feature:1187540-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1171514-1171756:-1:exon

XP_016156951.1
type: Protein
SIO_000068: ncbiprotein

position:1171514:-1
position: 1171514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1189740:-1
position: 1189740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1189674-1189740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187540-1187640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1171514-1171756:-1:exon

HDAC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 11 isoform X2
translation: MGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATDEDLLVVHTRRYLNKLKWSFVVATITEIPPVAFLPNFVVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIIDLDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRRVELEWGTEDAEYLQKVQTHVEGALNEFQPDIVVYNAGTDVLDGDPLGGLAISPQGIVKRDEVVFRAARSRGVPVLMVTSGGYQKRTARIIADSILNLHGLGLLAGGQAACALGSPSLDQMVRDSAKDFSNLSLQ
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1171514..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187540..1187640,1189674..1189740))
location: region:1171514-1189740:-1
so has part: feature:1189674-1189740:-1:exon
so has part: feature:1187540-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1171514-1171756:-1:exon

XP_005052901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1189674-1189740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187540-1187640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1171514-1171756:-1:exon

HDAC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 11 isoform X1
translation: MGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATDEDLLVVHTRRYLNKLKVLYLFMCVSSKLSRWSFVVATITEIPPVAFLPNFVVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIIDLDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRRVELEWGTEDAEYLQKVQTHVEGALNEFQPDIVVYNAGTDVLDGDPLGGLAISPQGIVKRDEVVFRAARSRGVPVLMVTSGGYQKRTARIIADSILNLHGLGLLAGGQAACALGSPSLDQMVRDSAKDFSNLSLQ
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1171514..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187498..1187640,1189674..1189740))
location: region:1171514-1189740:-1
so has part: feature:1189674-1189740:-1:exon
so has part: feature:1187498-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1171514-1171756:-1:exon

XP_005052896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1189674-1189740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187498-1187640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1171514-1171756:-1:exon

HDAC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 11 isoform X1
translation: MGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATDEDLLVVHTRRYLNKLKVLYLFMCVSSKLSRWSFVVATITEIPPVAFLPNFVVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIIDLDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRRVELEWGTEDAEYLQKVQTHVEGALNEFQPDIVVYNAGTDVLDGDPLGGLAISPQGIVKRDEVVFRAARSRGVPVLMVTSGGYQKRTARIIADSILNLHGLGLLAGGQAACALGSPSLDQMVRDSAKDFSNLSLQ
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1171514..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187498..1187640,1189674..1189740))
location: region:1171514-1189740:-1
so has part: feature:1189674-1189740:-1:exon
so has part: feature:1187498-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1171514-1171756:-1:exon

XP_005052897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1189674-1189740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187498-1187640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1171514-1171756:-1:exon

HDAC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 11 isoform X1
translation: MGLEKLHPFDAGKWGKVINFLKEEKLIADDLIVQAREATDEDLLVVHTRRYLNKLKVLYLFMCVSSKLSRWSFVVATITEIPPVAFLPNFVVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIIDLDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRRVELEWGTEDAEYLQKVQTHVEGALNEFQPDIVVYNAGTDVLDGDPLGGLAISPQGIVKRDEVVFRAARSRGVPVLMVTSGGYQKRTARIIADSILNLHGLGLLAGGQAACALGSPSLDQMVRDSAKDFSNLSLQ
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1171514..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187498..1187640,1189674..1189740))
location: region:1171514-1189740:-1
so has part: feature:1189674-1189740:-1:exon
so has part: feature:1187498-1187640:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1171514-1171756:-1:exon

XP_005052900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1189674-1189740:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1187498-1187640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1171514-1171756:-1:exon

HDAC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HDAC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 11 isoform X3
translation: MCVSSKLSRWSFVVATITEIPPVAFLPNFVVQRKVLKPLRTQTGGTIMAGKLAVDRGWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVQGVSRATIIDLDAHQGNGHERDFMDDPRVYIMDAYNRYIYPGDGFAKRAIKRRVELEWGTEDAEYLQKVQTHVEGALNEFQPDIVVYNAGTDVLDGDPLGGLAISPQGIVKRDEVVFRAARSRGVPVLMVTSGGYQKRTARIIADSILNLHGLGLLAGGQAACALGSPSLDQMVRDSAKDFSNLSLQ
SIO_010081: HDAC11
subclass of: SO_0000673
so part of: HDAC11
location: complement(join(1171514..1171756,1174827..1175005,1177794..1177890,1179749..1179811,1181059..1181135,1181283..1181325,1183399..1183515,1187498..1187524))
location: region:1171514-1187524:-1
so has part: feature:1187498-1187524:-1:exon
so has part: feature:1183399-1183515:-1:exon
so has part: feature:1181283-1181325:-1:exon
so has part: feature:1181059-1181135:-1:exon
so has part: feature:1179749-1179811:-1:exon
so has part: feature:1177794-1177890:-1:exon
so has part: feature:1174827-1175005:-1:exon
so has part: feature:1171514-1171756:-1:exon

XP_005052899.1
type: Protein
SIO_000068: ncbiprotein

position:1187524:-1
position: 1187524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187498-1187524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1183399-1183515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1181283-1181325:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1181059-1181135:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1179749-1179811:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1177794-1177890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1174827-1175005:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1171514-1171756:-1:exon

NUP210
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NUP210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1214788..1267882
location: region:1214788-1267882:1
so has part: feature:1214788-1267882:1:exon
subclass of: SO_0000010

101818797
type: Gene
SIO_000068: ncbigene

position:1214788:1
position: 1214788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1267882:1
position: 1267882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214788-1267882:1:exon

NUP210
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NUP210
product: nucleoporin 210kDa
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301467.1
SIO_010081: NUP210
subclass of: SO_0000673
so part of: NUP210
location: join(1214788..1214945,1223199..1223232,1223341..1223443,1225318..1225449,1226259..1226355,1227829..1227979,1228280..1228412,1229160..1229318,1229809..1229877,1230172..1230278,1231250..1231390,1232699..1232836,1235534..1235689,1236986..1237184,1237742..1237887,1239000..1239221,1240477..1240650,1241641..1241833,1242103..1242209,1244405..1244509,1244639..1244740,1247407..1247535,1248204..1248331,1248862..1248997,1249293..1249355,1250233..1250412,1252056..1252136,1252362..1252493,1252665..1252823,1253347..1253438,1254073..1254247,1257313..1257488,1260088..1260305,1260785..1260921,1261639..1261762,1262633..1262779,1264723..1264973,1265710..1265929,1266063..1266158,1266285..1266368,1267464..1267882)
location: region:1214788-1267882:1
so has part: feature:1214788-1214945:1:exon
so has part: feature:1223199-1223232:1:exon
so has part: feature:1223341-1223443:1:exon
so has part: feature:1225318-1225449:1:exon
so has part: feature:1226259-1226355:1:exon
so has part: feature:1227829-1227979:1:exon
so has part: feature:1228280-1228412:1:exon
so has part: feature:1229160-1229318:1:exon
so has part: feature:1229809-1229877:1:exon
so has part: feature:1230172-1230278:1:exon
so has part: feature:1231250-1231390:1:exon
so has part: feature:1232699-1232836:1:exon
so has part: feature:1235534-1235689:1:exon
so has part: feature:1236986-1237184:1:exon
so has part: feature:1237742-1237887:1:exon
so has part: feature:1239000-1239221:1:exon
so has part: feature:1240477-1240650:1:exon
so has part: feature:1241641-1241833:1:exon
so has part: feature:1242103-1242209:1:exon
so has part: feature:1244405-1244509:1:exon
so has part: feature:1244639-1244740:1:exon
so has part: feature:1247407-1247535:1:exon
so has part: feature:1248204-1248331:1:exon
so has part: feature:1248862-1248997:1:exon
so has part: feature:1249293-1249355:1:exon
so has part: feature:1250233-1250412:1:exon
so has part: feature:1252056-1252136:1:exon
so has part: feature:1252362-1252493:1:exon
so has part: feature:1252665-1252823:1:exon
so has part: feature:1253347-1253438:1:exon
so has part: feature:1254073-1254247:1:exon
so has part: feature:1257313-1257488:1:exon
so has part: feature:1260088-1260305:1:exon
so has part: feature:1260785-1260921:1:exon
so has part: feature:1261639-1261762:1:exon
so has part: feature:1262633-1262779:1:exon
so has part: feature:1264723-1264973:1:exon
so has part: feature:1265710-1265929:1:exon
so has part: feature:1266063-1266158:1:exon
so has part: feature:1266285-1266368:1:exon
so has part: feature:1267464-1267882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1214788-1214945:1:exon

position:1214945:1
position: 1214945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1223199-1223232:1:exon

position:1223199:1
position: 1223199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223232:1
position: 1223232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1223341-1223443:1:exon

position:1223341:1
position: 1223341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1223443:1
position: 1223443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1225318-1225449:1:exon

position:1225318:1
position: 1225318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225449:1
position: 1225449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1226259-1226355:1:exon

position:1226259:1
position: 1226259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1226355:1
position: 1226355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1227829-1227979:1:exon

position:1227829:1
position: 1227829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227979:1
position: 1227979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1228280-1228412:1:exon

position:1228280:1
position: 1228280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1228412:1
position: 1228412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1229160-1229318:1:exon

position:1229160:1
position: 1229160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229318:1
position: 1229318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1229809-1229877:1:exon

position:1229809:1
position: 1229809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1229877:1
position: 1229877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1230172-1230278:1:exon

position:1230172:1
position: 1230172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1230278:1
position: 1230278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1231250-1231390:1:exon

position:1231250:1
position: 1231250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1231390:1
position: 1231390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1232699-1232836:1:exon

position:1232699:1
position: 1232699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232836:1
position: 1232836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1235534-1235689:1:exon

position:1235534:1
position: 1235534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235689:1
position: 1235689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1236986-1237184:1:exon

position:1236986:1
position: 1236986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237184:1
position: 1237184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1237742-1237887:1:exon

position:1237742:1
position: 1237742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237887:1
position: 1237887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1239000-1239221:1:exon

position:1239000:1
position: 1239000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239221:1
position: 1239221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1240477-1240650:1:exon

position:1240477:1
position: 1240477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1240650:1
position: 1240650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1241641-1241833:1:exon

position:1241641:1
position: 1241641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241833:1
position: 1241833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1242103-1242209:1:exon

position:1242103:1
position: 1242103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1242209:1
position: 1242209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1244405-1244509:1:exon

position:1244405:1
position: 1244405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244509:1
position: 1244509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1244639-1244740:1:exon

position:1244639:1
position: 1244639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244740:1
position: 1244740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1247407-1247535:1:exon

position:1247407:1
position: 1247407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247535:1
position: 1247535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1248204-1248331:1:exon

position:1248204:1
position: 1248204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248331:1
position: 1248331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1248862-1248997:1:exon

position:1248862:1
position: 1248862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248997:1
position: 1248997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1249293-1249355:1:exon

position:1249293:1
position: 1249293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249355:1
position: 1249355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1250233-1250412:1:exon

position:1250233:1
position: 1250233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250412:1
position: 1250412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1252056-1252136:1:exon

position:1252056:1
position: 1252056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252136:1
position: 1252136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1252362-1252493:1:exon

position:1252362:1
position: 1252362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252493:1
position: 1252493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1252665-1252823:1:exon

position:1252665:1
position: 1252665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1252823:1
position: 1252823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1253347-1253438:1:exon

position:1253347:1
position: 1253347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253438:1
position: 1253438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1254073-1254247:1:exon

position:1254073:1
position: 1254073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1254247:1
position: 1254247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1257313-1257488:1:exon

position:1257313:1
position: 1257313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1257488:1
position: 1257488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1260088-1260305:1:exon

position:1260088:1
position: 1260088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260305:1
position: 1260305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1260785-1260921:1:exon

position:1260785:1
position: 1260785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260921:1
position: 1260921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1261639-1261762:1:exon

position:1261639:1
position: 1261639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261762:1
position: 1261762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1262633-1262779:1:exon

position:1262633:1
position: 1262633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1262779:1
position: 1262779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1264723-1264973:1:exon

position:1264723:1
position: 1264723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264973:1
position: 1264973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1265710-1265929:1:exon

position:1265710:1
position: 1265710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1265929:1
position: 1265929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1266063-1266158:1:exon

position:1266063:1
position: 1266063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266158:1
position: 1266158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1266285-1266368:1:exon

position:1266285:1
position: 1266285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266368:1
position: 1266368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1267464-1267882:1:exon

position:1267464:1
position: 1267464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NUP210
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear pore membrane glycoprotein 210
translation: MAPPAPGALPLLLLLLLHLAASSKLNTPKVLLPFTRATRVNFTLEASEGCYRWSSTRPEVASIEPPPPPGCRCSQRALVQARSAQPARLTAIISAEDTLTGQVLRCDAIVDLIHGIQVVSTTRELYLEDSPLELKIHALDSEGNTFSTLAGLVFDWTVVKDPEADGFSDSHNALRILKFLESTYIPPSYILEMEKVAKQGDTILVSGMKTGSSKLKARLQESIYKDVHPAEVRLLILENIILNPVYDIYLLVGTSIQYRVQKLRQGKITEIAMPSDQYELQLQNNILHPKGDSSRPVARLDQATSIVTALQQGQTNLILVHKSIRMQGVSRLPNSTIYVVSPAYLGFTVHPGDRWVLETGRLYEITIDVYDKSSNKVYLSDNIRITTELSKEYFEVLQSSLNGSYHHVMAVKAGQTMIDAALTSVVDQDGGVHTLPVPVRNQQDVEIYVPIFLLPSILMFPWQPKAGVYQYSIQAQGGSGNFSWSSSNQAVATVTVKGVMTTGSDAGVSIIQAFDVRNPLHYGEMKVYVSQPSTMEFAPCQVEAHVGQVLELPLRVSGWTSVDRGELVPLSDCSHLELVVELENPGVFSPLEGRLEPTADFCSGVRVKAEFQGYTRLVVVYSHGHVRLSAGIAIAAYVPLRAIDPPSVAVVTLGSSKDMLFEGGPRPWVQEPSKFFRNIAAEDAENIALSLLEPPTPRNSNQHWVRVLCRSLGEQVITLTVGNSPTVTNPFPVVEPAVVKFVCAVPSRLALIPVYGSPQLDLSCPLLQQNKQVVPVSNYRNPILDLAAYDQQGRKFDNFSSLSVVWESTNKAIARIEPELPVELALKEEGNGQKKMHGLQTVVVDREFGTAAISATATGFQQPHLKAARAKIPHEAVLPGPATIELMLVEDVKVSPAGVSIYNHPDVQAELLIQQGSGYFFINTSVPNIVKVTHEETQGIAVVQPLLPGSVTVMIHDLCLAFPAPAEAEVHVSDIQEVYVRVVDKVEIGKTVKAYVRVLDDSKKPFLAKYFPVMDLSLRAASQLVSLVPLREALDDHTAVFLVRGMTIGQTSLMATVTDSRGQRISSAPQQIEVFPPFRLLPRKVTLIIGALIQITAEGGPQPLSNIIFSIDNEHIAAVNSSGLVRGVAIGSGVVTGVLQAVDAETEKLVAVSQDKVEVEVVQLTAVRIRAPITRMKVGTQMPVYVMGITSTQTPFSFGNAVPGLTFHWSVSKRDTLDVRTRHSEAAFQLPANYNFAVDVHGRVKGRTGLKVVVKVLDAAANQFYNMARELSDEIQIQVFEQLQLVTPETETEQILMSPNSFIKLRTNRDRVASLSYRVLDGPDKVPVVTVDERGFLVSGSVIGSATVEVISQELFGINQTIIAAVKVCPISYLRISMMPVLLTQNKEALLGLPLGVTLTFAVHFHDNSGDTFHSHNAVLNFATNRDDFVQIAKGAANNTFVVRTVNVGLTLLRVWDAEHSGTADYIPLPVQHAIFPELPDVVVGDVLCLRTSLTAQEGQPGMWSSSSSALLLVDSKTGVSLARDSGVVTVYYEIPGLLKTYREIVINAPQKTTAMHASGVQTSLQGVAASKVIVSIGEANKNLKGECSPAQTEAIAELQPQSLISCHLDFNSDAFDFPAQDIFVAEPGFDAVSGHYTCSIRMHSLTDKQLKQLGRSRAALRVAAALRGGAAPGQRLPTEVPFSRWLYADQAEMLLSNQDASSVLKVFGDSDILDSLEVTCESPAVKVQEKEKSYGLPSYVVYTVSLADPRVPSQGSLSTSLTVSSPMTDQTITIPVTVIYLADRTAAPMRYEASLFQQFVESYQVMIFTLFTLLAGTAVMIIAYHAFFSPNEQHNQPVFHPRMSLQHTPNSSLASPAHSFSSQGSSRQASPSAPLWSTGYASR
SIO_010081: NUP210
subclass of: SO_0000673
so part of: NUP210
location: join(1214788..1214945,1223199..1223232,1223341..1223443,1225318..1225449,1226259..1226355,1227829..1227979,1228280..1228412,1229160..1229318,1229809..1229877,1230172..1230278,1231250..1231390,1232699..1232836,1235534..1235689,1236986..1237184,1237742..1237887,1239000..1239221,1240477..1240650,1241641..1241833,1242103..1242209,1244405..1244509,1244639..1244740,1247407..1247535,1248204..1248331,1248862..1248997,1249293..1249355,1250233..1250412,1252056..1252136,1252362..1252493,1252665..1252823,1253347..1253438,1254073..1254247,1257313..1257488,1260088..1260305,1260785..1260921,1261639..1261762,1262633..1262779,1264723..1264973,1265710..1265929,1266063..1266158,1266285..1266368,1267464..1267564)
location: region:1214788-1267564:1
so has part: feature:1214788-1214945:1:exon
so has part: feature:1223199-1223232:1:exon
so has part: feature:1223341-1223443:1:exon
so has part: feature:1225318-1225449:1:exon
so has part: feature:1226259-1226355:1:exon
so has part: feature:1227829-1227979:1:exon
so has part: feature:1228280-1228412:1:exon
so has part: feature:1229160-1229318:1:exon
so has part: feature:1229809-1229877:1:exon
so has part: feature:1230172-1230278:1:exon
so has part: feature:1231250-1231390:1:exon
so has part: feature:1232699-1232836:1:exon
so has part: feature:1235534-1235689:1:exon
so has part: feature:1236986-1237184:1:exon
so has part: feature:1237742-1237887:1:exon
so has part: feature:1239000-1239221:1:exon
so has part: feature:1240477-1240650:1:exon
so has part: feature:1241641-1241833:1:exon
so has part: feature:1242103-1242209:1:exon
so has part: feature:1244405-1244509:1:exon
so has part: feature:1244639-1244740:1:exon
so has part: feature:1247407-1247535:1:exon
so has part: feature:1248204-1248331:1:exon
so has part: feature:1248862-1248997:1:exon
so has part: feature:1249293-1249355:1:exon
so has part: feature:1250233-1250412:1:exon
so has part: feature:1252056-1252136:1:exon
so has part: feature:1252362-1252493:1:exon
so has part: feature:1252665-1252823:1:exon
so has part: feature:1253347-1253438:1:exon
so has part: feature:1254073-1254247:1:exon
so has part: feature:1257313-1257488:1:exon
so has part: feature:1260088-1260305:1:exon
so has part: feature:1260785-1260921:1:exon
so has part: feature:1261639-1261762:1:exon
so has part: feature:1262633-1262779:1:exon
so has part: feature:1264723-1264973:1:exon
so has part: feature:1265710-1265929:1:exon
so has part: feature:1266063-1266158:1:exon
so has part: feature:1266285-1266368:1:exon
so has part: feature:1267464-1267564:1:exon

XP_016156953.1
type: Protein
SIO_000068: ncbiprotein

position:1267564:1
position: 1267564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214788-1214945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1223199-1223232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1223341-1223443:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1225318-1225449:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1226259-1226355:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1227829-1227979:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1228280-1228412:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1229160-1229318:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1229809-1229877:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1230172-1230278:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1231250-1231390:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1232699-1232836:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1235534-1235689:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1236986-1237184:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1237742-1237887:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1239000-1239221:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1240477-1240650:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1241641-1241833:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1242103-1242209:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1244405-1244509:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1244639-1244740:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1247407-1247535:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1248204-1248331:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1248862-1248997:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1249293-1249355:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1250233-1250412:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1252056-1252136:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1252362-1252493:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1252665-1252823:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1253347-1253438:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1254073-1254247:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1257313-1257488:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1260088-1260305:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1260785-1260921:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1261639-1261762:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1262633-1262779:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1264723-1264973:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1265710-1265929:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1266063-1266158:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1266285-1266368:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1267464-1267564:1:exon

IQSEC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1317818..1600040
location: region:1317818-1600040:1
so has part: feature:1317818-1600040:1:exon
subclass of: SO_0000010

101821996
type: Gene
SIO_000068: ncbigene

position:1317818:1
position: 1317818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600040:1
position: 1600040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1317818-1600040:1:exon

IQSEC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IQSEC1
product: IQ motif and Sec7 domain 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301351.1
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1317818..1317945,1318022..1318314,1372250..1372279,1438529..1438615,1462957..1463001,1562376..1562655,1563306..1564570,1577623..1577784,1579049..1579171,1579913..1580079,1582007..1582146,1583667..1583696,1584887..1585012,1586299..1586398,1589578..1589739,1590993..1591169,1597621..1597670,1599065..1599257,1599528..1600040)
location: region:1317818-1600040:1
so has part: feature:1317818-1317945:1:exon
so has part: feature:1318022-1318314:1:exon
so has part: feature:1372250-1372279:1:exon
so has part: feature:1438529-1438615:1:exon
so has part: feature:1462957-1463001:1:exon
so has part: feature:1562376-1562655:1:exon
so has part: feature:1563306-1564570:1:exon
so has part: feature:1577623-1577784:1:exon
so has part: feature:1579049-1579171:1:exon
so has part: feature:1579913-1580079:1:exon
so has part: feature:1582007-1582146:1:exon
so has part: feature:1583667-1583696:1:exon
so has part: feature:1584887-1585012:1:exon
so has part: feature:1586299-1586398:1:exon
so has part: feature:1589578-1589739:1:exon
so has part: feature:1590993-1591169:1:exon
so has part: feature:1597621-1597670:1:exon
so has part: feature:1599065-1599257:1:exon
so has part: feature:1599528-1600040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1317818-1317945:1:exon

position:1317945:1
position: 1317945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1318022-1318314:1:exon

position:1318022:1
position: 1318022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318314:1
position: 1318314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1372250-1372279:1:exon

position:1372250:1
position: 1372250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372279:1
position: 1372279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1438529-1438615:1:exon

position:1438529:1
position: 1438529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438615:1
position: 1438615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1462957-1463001:1:exon

position:1462957:1
position: 1462957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463001:1
position: 1463001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1562376-1562655:1:exon

position:1562376:1
position: 1562376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562655:1
position: 1562655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1563306-1564570:1:exon

position:1563306:1
position: 1563306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564570:1
position: 1564570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1577623-1577784:1:exon

position:1577623:1
position: 1577623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577784:1
position: 1577784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1579049-1579171:1:exon

position:1579049:1
position: 1579049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579171:1
position: 1579171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1579913-1580079:1:exon

position:1579913:1
position: 1579913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1580079:1
position: 1580079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1582007-1582146:1:exon

position:1582007:1
position: 1582007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582146:1
position: 1582146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1583667-1583696:1:exon

position:1583667:1
position: 1583667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1583696:1
position: 1583696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1584887-1585012:1:exon

position:1584887:1
position: 1584887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585012:1
position: 1585012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1586299-1586398:1:exon

position:1586299:1
position: 1586299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586398:1
position: 1586398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1589578-1589739:1:exon

position:1589578:1
position: 1589578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589739:1
position: 1589739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1590993-1591169:1:exon

position:1590993:1
position: 1590993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591169:1
position: 1591169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1597621-1597670:1:exon

position:1597621:1
position: 1597621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1597670:1
position: 1597670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1599065-1599257:1:exon

position:1599065:1
position: 1599065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599257:1
position: 1599257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1599528-1600040:1:exon

position:1599528:1
position: 1599528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IQSEC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IQSEC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IQ motif and SEC7 domain-containing protein 1
translation: MESPAENPSKAAEYLKELNKIIETQQELLEKQKRRIDELEQQVAKLYHENACLQDEHHRHLATCRLQQGVLPAPPGVLSAIQENARHEKSEGDSSRSLRSLNTLHQFCCPAPLYHSQLAVPATHSEYRTSLETGSSVSTDPLSVEGEAPSSETGTSLDSPSGYPQGPITHSSALSPEHYEHPYGLYSIAPGQQRARRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQDKQVEMLERKYGGRLITRHAARTIQTAFRQYQMNKNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKVHSSYFEGKQVSVTNDGSKLGSLVPSECDELGETATMKSPAASTDFSDAITELEDAFSRQVKSLAESIDDALNCRSLHSDEIQSAEQVRSREMERESCAPSKPAIHNVDHRKLDEMTASYSDVTLYIDEEELSPPLPLSQSVDRPSSTESDLRLRAVNSSQEYWSMTHKDDKIDTDTSCRSTPSLECQEQRMRMDHLPLLTIEPPSDSSVDLSDRSERGSLKRQNAYDRGIPSQQGSPKHIPHSIPAKIITREEQEARHRARPIDSHLAINGTANRQSKSESDYSDGDNDSINSTSNSNDTINCSSESSSRDSLREQTLSKQTYHKETRNSWDSPAFSNDVIRKRHYRIGLNLFNKKPEKGVQYLIERGFVPDTPVGVAHFLLQRKGLSRQMIGEFLGNRQKQFNRDVLDCVVDEMDFSTMELDEALRKFQAHIRVQGEAQKVERLIEAFSQRYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFIKNLRGVDDGEDIPREMLIGIYERIRKRELKTNEDHVSQVQKVEKLIVGKKPIGSLHHGLGCVLSLPHRRLVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSFRQSFSLYGMQVLLFENQYYPNGIRLTSAVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEMEKHRIESELEKQKGVVRPSMSQCSSLKKDSGNGTLPRACLDDSYAGGEGLKRSALSSSLRDLSEAGKRGRRSSAGSLDSNMEGSIISSPHMRRRATSTRECPSRPHQTMPNSSSLLGSLFGSKRGKAPSQSQSHAAPQPPHHAEGGAPHPHHGPYCHQNPPPYHHHHHYHPPPHPHPHQYHQHGHGHGPFLPHGHGPHHGPHHHGPPPPPASAKPKHSGISTIV
SIO_010081: IQSEC1
subclass of: SO_0000673
so part of: IQSEC1
location: join(1318049..1318314,1372250..1372279,1438529..1438615,1462957..1463001,1562376..1562655,1563306..1564570,1577623..1577784,1579049..1579171,1579913..1580079,1582007..1582146,1583667..1583696,1584887..1585012,1586299..1586398,1589578..1589739,1590993..1591169,1597621..1597670,1599065..1599257,1599528..1599763)
location: region:1318049-1599763:1
so has part: feature:1318049-1318314:1:exon
so has part: feature:1372250-1372279:1:exon
so has part: feature:1438529-1438615:1:exon
so has part: feature:1462957-1463001:1:exon
so has part: feature:1562376-1562655:1:exon
so has part: feature:1563306-1564570:1:exon
so has part: feature:1577623-1577784:1:exon
so has part: feature:1579049-1579171:1:exon
so has part: feature:1579913-1580079:1:exon
so has part: feature:1582007-1582146:1:exon
so has part: feature:1583667-1583696:1:exon
so has part: feature:1584887-1585012:1:exon
so has part: feature:1586299-1586398:1:exon
so has part: feature:1589578-1589739:1:exon
so has part: feature:1590993-1591169:1:exon
so has part: feature:1597621-1597670:1:exon
so has part: feature:1599065-1599257:1:exon
so has part: feature:1599528-1599763:1:exon

XP_016156837.1
type: Protein
SIO_000068: ncbiprotein

position:1318049:1
position: 1318049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599763:1
position: 1599763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1318049-1318314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1372250-1372279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1438529-1438615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1462957-1463001:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1562376-1562655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1563306-1564570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1577623-1577784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1579049-1579171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1579913-1580079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1582007-1582146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1583667-1583696:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1584887-1585012:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1586299-1586398:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1589578-1589739:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1590993-1591169:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1597621-1597670:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1599065-1599257:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1599528-1599763:1:exon

ACAD9
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ACAD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1612953..1630667
location: region:1612953-1630667:1
so has part: feature:1612953-1630667:1:exon
subclass of: SO_0000010

101821807
type: Gene
SIO_000068: ncbigene

position:1612953:1
position: 1612953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630667:1
position: 1630667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1612953-1630667:1:exon

ACAD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ACAD9
product: acyl-CoA dehydrogenase family member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_016301469.1
SIO_010081: ACAD9
subclass of: SO_0000673
so part of: ACAD9
location: join(1612953..1613055,1615055..1615148,1616468..1616569,1616744..1616850,1617584..1617684,1618355..1618433,1619350..1619524,1620129..1620202,1622168..1622243,1622913..1622983,1623314..1623433,1624101..1624229,1624958..1625037,1625589..1625715,1626439..1626516,1627006..1627134,1629900..1629972,1630424..1630667)
location: region:1612953-1630667:1
so has part: feature:1612953-1613055:1:exon
so has part: feature:1615055-1615148:1:exon
so has part: feature:1616468-1616569:1:exon
so has part: feature:1616744-1616850:1:exon
so has part: feature:1617584-1617684:1:exon
so has part: feature:1618355-1618433:1:exon
so has part: feature:1619350-1619524:1:exon
so has part: feature:1620129-1620202:1:exon
so has part: feature:1622168-1622243:1:exon
so has part: feature:1622913-1622983:1:exon
so has part: feature:1623314-1623433:1:exon
so has part: feature:1624101-1624229:1:exon
so has part: feature:1624958-1625037:1:exon
so has part: feature:1625589-1625715:1:exon
so has part: feature:1626439-1626516:1:exon
so has part: feature:1627006-1627134:1:exon
so has part: feature:1629900-1629972:1:exon
so has part: feature:1630424-1630667:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1612953-1613055:1:exon

position:1613055:1
position: 1613055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1615055-1615148:1:exon

position:1615055:1
position: 1615055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615148:1
position: 1615148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1616468-1616569:1:exon

position:1616468:1
position: 1616468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616569:1
position: 1616569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1616744-1616850:1:exon

position:1616744:1
position: 1616744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616850:1
position: 1616850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1617584-1617684:1:exon

position:1617584:1
position: 1617584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617684:1
position: 1617684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1618355-1618433:1:exon

position:1618355:1
position: 1618355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618433:1
position: 1618433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1619350-1619524:1:exon

position:1619350:1
position: 1619350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1619524:1
position: 1619524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1620129-1620202:1:exon

position:1620129:1
position: 1620129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620202:1
position: 1620202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1622168-1622243:1:exon

position:1622168:1
position: 1622168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622243:1
position: 1622243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1622913-1622983:1:exon

position:1622913:1
position: 1622913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622983:1
position: 1622983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1623314-1623433:1:exon

position:1623314:1
position: 1623314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623433:1
position: 1623433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1624101-1624229:1:exon

position:1624101:1
position: 1624101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624229:1
position: 1624229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1624958-1625037:1:exon

position:1624958:1
position: 1624958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625037:1
position: 1625037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1625589-1625715:1:exon

position:1625589:1
position: 1625589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625715:1
position: 1625715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1626439-1626516:1:exon

position:1626439:1
position: 1626439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626516:1
position: 1626516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1627006-1627134:1:exon

position:1627006:1
position: 1627006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627134:1
position: 1627134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1629900-1629972:1:exon

position:1629900:1
position: 1629900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629972:1
position: 1629972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1630424-1630667:1:exon

position:1630424:1
position: 1630424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACAD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ACAD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-CoA dehydrogenase family member 9, mitochondrial
translation: MQIPEEYGGLGLSNTMYARLGEITSLDGSIAVTLAAHQAIGLKGILIAGTEEQKAKYLPRLASGEHIAAFCLTEPGSGSDAASIQTRATLSEDGKHFLLNGSKVWISNGGLASIFTVFARTEVVDKDGQVKDKITAFIVERDFGGVTHGKPEDKLGIRGSNTCEVHFENTKVPIENVIGEVGGGFKVAMNILNSGRFSMGSASAGMIKKLIELTSEYACTRKQFNKKLSQFGLIQEKFCLMAVKAYVMESMAYLTAGMMDRPGFPDCSVEAAMVKVFSSEGAWACVSEALQILGGLGYMKDYPYERYLRDTRILLIFEGTNEILRMYIALTGMQHAGKILTDKIKAIKKGNMGVALGEFLTRLQETLGRKVDLGLVGDRGVVHPSLQESAKKLEENVYYFGTTVRGLLSRFGKTIVEEQLVLKRVADVVINLYAMTAAISRASRSISIGLRNHDHEVLLTNIFCTEAYFKNNYAMAQLEKYADENLDDSIKKAAKQILEKRAYICSHPLDRTF
SIO_010081: ACAD9
subclass of: SO_0000673
so part of: ACAD9
location: join(1616548..1616569,1616744..1616850,1617584..1617684,1618355..1618433,1619350..1619524,1620129..1620202,1622168..1622243,1622913..1622983,1623314..1623433,1624101..1624229,1624958..1625037,1625589..1625715,1626439..1626516,1627006..1627134,1629900..1629972,1630424..1630524)
location: region:1616548-1630524:1
so has part: feature:1616548-1616569:1:exon
so has part: feature:1616744-1616850:1:exon
so has part: feature:1617584-1617684:1:exon
so has part: feature:1618355-1618433:1:exon
so has part: feature:1619350-1619524:1:exon
so has part: feature:1620129-1620202:1:exon
so has part: feature:1622168-1622243:1:exon
so has part: feature:1622913-1622983:1:exon
so has part: feature:1623314-1623433:1:exon
so has part: feature:1624101-1624229:1:exon
so has part: feature:1624958-1625037:1:exon
so has part: feature:1625589-1625715:1:exon
so has part: feature:1626439-1626516:1:exon
so has part: feature:1627006-1627134:1:exon
so has part: feature:1629900-1629972:1:exon
so has part: feature:1630424-1630524:1:exon

XP_016156955.1
type: Protein
SIO_000068: ncbiprotein

position:1616548:1
position: 1616548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630524:1
position: 1630524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1616548-1616569:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1616744-1616850:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1617584-1617684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1618355-1618433:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1619350-1619524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1620129-1620202:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1622168-1622243:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1622913-1622983:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1623314-1623433:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1624101-1624229:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1624958-1625037:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1625589-1625715:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1626439-1626516:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1627006-1627134:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1629900-1629972:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1630424-1630524:1:exon

LOC107603928
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1628786..1629036
location: region:1628786-1629036:1
so has part: feature:1628786-1629036:1:exon
subclass of: SO_0000011

107603928
type: Gene
SIO_000068: ncbigene

position:1628786:1
position: 1628786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629036:1
position: 1629036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1628786-1629036:1:exon

LOC107603928
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107603928
product: uncharacterized LOC107603928
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001611744.1
SIO_010081: LOC107603928
subclass of: SO_0000673
so part of: LOC107603928
location: join(1628786..1628815,1628966..1629036)
location: region:1628786-1629036:1
so has part: feature:1628786-1628815:1:exon
so has part: feature:1628966-1629036:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1628786-1628815:1:exon

position:1628815:1
position: 1628815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1628966-1629036:1:exon

position:1628966:1
position: 1628966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107603907
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1634891..1664966)
location: region:1634891-1664966:-1
so has part: feature:1634891-1664966:-1:exon
subclass of: SO_0000010

107603907
type: Gene
SIO_000068: ncbigene

position:1634891:-1
position: 1634891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664966:-1
position: 1664966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634891-1664966:-1:exon

LOC107603907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107603907
product: uncharacterized LOC107603907
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301310.1
SIO_010081: LOC107603907
subclass of: SO_0000673
so part of: LOC107603907
location: complement(join(1634891..1635241,1635900..1636065,1636654..1636773,1637078..1637149,1637537..1637608,1638117..1638191,1647797..1647895,1647984..1648055,1648144..1648215,1648857..1648964,1664727..1664825,1664914..1664966))
location: region:1634891-1664966:-1
so has part: feature:1664914-1664966:-1:exon
so has part: feature:1664727-1664825:-1:exon
so has part: feature:1648857-1648964:-1:exon
so has part: feature:1648144-1648215:-1:exon
so has part: feature:1647984-1648055:-1:exon
so has part: feature:1647797-1647895:-1:exon
so has part: feature:1638117-1638191:-1:exon
so has part: feature:1637537-1637608:-1:exon
so has part: feature:1637078-1637149:-1:exon
so has part: feature:1636654-1636773:-1:exon
so has part: feature:1635900-1636065:-1:exon
so has part: feature:1634891-1635241:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1664914-1664966:-1:exon

position:1664914:-1
position: 1664914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1664727-1664825:-1:exon

position:1664727:-1
position: 1664727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664825:-1
position: 1664825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1648857-1648964:-1:exon

position:1648857:-1
position: 1648857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648964:-1
position: 1648964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1648144-1648215:-1:exon

position:1648144:-1
position: 1648144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648215:-1
position: 1648215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1647984-1648055:-1:exon

position:1647984:-1
position: 1647984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1648055:-1
position: 1648055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1647797-1647895:-1:exon

position:1647797:-1
position: 1647797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647895:-1
position: 1647895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1638117-1638191:-1:exon

position:1638117:-1
position: 1638117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1638191:-1
position: 1638191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1637537-1637608:-1:exon

position:1637537:-1
position: 1637537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1637608:-1
position: 1637608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1637078-1637149:-1:exon

position:1637078:-1
position: 1637078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1637149:-1
position: 1637149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1636654-1636773:-1:exon

position:1636654:-1
position: 1636654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1636773:-1
position: 1636773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1635900-1636065:-1:exon

position:1635900:-1
position: 1635900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1636065:-1
position: 1636065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1634891-1635241:-1:exon

position:1635241:-1
position: 1635241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107603907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107603907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107603907
translation: MLSDLERRRAMKVKTVLKALFPGGSRGSVPASAAGREAMPGTVTGGERARKTSPAAWRHKDLQPLEPPADVSAWKTFPNPLVDATQKPSSHHRGFLRRKNKQIDKSESLEASDFLAQMLSDLERRRGMDREPLWKATFPEGREAMPGTGTGDWDQDMDYLKALAQDSLKSLENAGDEPVGEGDLASQPTSRTEIQGAGEVIEQKSVLKEAFPRGSSGSVPASPAGGTAMPGTGTGTGTGGAAGTSTHVPNSQKEDGKGFCQDIHCWLKLMAFLVVLELVFMSCCIGTWYYWKRKRSASAASQDRTKPSVGDTFACHRPSPCQCQLALSQLPFQLVALLPPPRTRPSVPRGAGPGVRPGLKVAPSFQGV
SIO_010081: LOC107603907
subclass of: SO_0000673
so part of: LOC107603907
location: complement(join(1635019..1635241,1635900..1636065,1636654..1636773,1637078..1637149,1637537..1637608,1638117..1638191,1647797..1647895,1647984..1648055,1648144..1648215,1648857..1648964,1664727..1664754))
location: region:1635019-1664754:-1
so has part: feature:1664727-1664754:-1:exon
so has part: feature:1648857-1648964:-1:exon
so has part: feature:1648144-1648215:-1:exon
so has part: feature:1647984-1648055:-1:exon
so has part: feature:1647797-1647895:-1:exon
so has part: feature:1638117-1638191:-1:exon
so has part: feature:1637537-1637608:-1:exon
so has part: feature:1637078-1637149:-1:exon
so has part: feature:1636654-1636773:-1:exon
so has part: feature:1635900-1636065:-1:exon
so has part: feature:1635019-1635241:-1:exon

XP_016156796.1
type: Protein
SIO_000068: ncbiprotein

position:1635019:-1
position: 1635019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664754:-1
position: 1664754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664727-1664754:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1648857-1648964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1648144-1648215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1647984-1648055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647797-1647895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1638117-1638191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1637537-1637608:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1637078-1637149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1636654-1636773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1635900-1636065:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1635019-1635241:-1:exon

LOC101818468
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101818468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1642579..1643205)
location: region:1642579-1643205:-1
so has part: feature:1642579-1643205:-1:exon
subclass of: SO_0000011

101818468
type: Gene
SIO_000068: ncbigene

position:1642579:-1
position: 1642579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1643205:-1
position: 1643205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642579-1643205:-1:exon

LOC101818468
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC101818468
product: uncharacterized LOC101818468
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_219073.2
SIO_010081: LOC101818468
subclass of: SO_0000673
so part of: LOC101818468
location: complement(join(1642579..1642670,1642760..1642831,1643034..1643205))
location: region:1642579-1643205:-1
so has part: feature:1643034-1643205:-1:exon
so has part: feature:1642760-1642831:-1:exon
so has part: feature:1642579-1642670:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1643034-1643205:-1:exon

position:1643034:-1
position: 1643034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1642760-1642831:-1:exon

position:1642760:-1
position: 1642760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642831:-1
position: 1642831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1642579-1642670:-1:exon

position:1642670:-1
position: 1642670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: EFCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1677854..1709695
location: region:1677854-1709695:1
so has part: feature:1677854-1709695:1:exon
subclass of: SO_0000010

101821610
type: Gene
SIO_000068: ncbigene

position:1677854:1
position: 1677854
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1709695:1
position: 1709695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677854-1709695:1:exon

EFCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: EFCC1
product: EF-hand and coiled-coil domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052853.2
SIO_010081: EFCC1
subclass of: SO_0000673
so part of: EFCC1
location: join(<1677854..1678021,1679270..1679676,1698058..1698078,1699419..1699429,1700760..1700835,1702175..1702334,1704779..1704937,1706359..1706428,1707873..1709695)
location: region:1677854-1709695:1
so has part: feature:1677854-1678021:1:exon
so has part: feature:1679270-1679676:1:exon
so has part: feature:1698058-1698078:1:exon
so has part: feature:1699419-1699429:1:exon
so has part: feature:1700760-1700835:1:exon
so has part: feature:1702175-1702334:1:exon
so has part: feature:1704779-1704937:1:exon
so has part: feature:1706359-1706428:1:exon
so has part: feature:1707873-1709695:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1677854-1678021:1:exon

position:1678021:1
position: 1678021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1679270-1679676:1:exon

position:1679270:1
position: 1679270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679676:1
position: 1679676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1698058-1698078:1:exon

position:1698058:1
position: 1698058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698078:1
position: 1698078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1699419-1699429:1:exon

position:1699419:1
position: 1699419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699429:1
position: 1699429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1700760-1700835:1:exon

position:1700760:1
position: 1700760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700835:1
position: 1700835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1702175-1702334:1:exon

position:1702175:1
position: 1702175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702334:1
position: 1702334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1704779-1704937:1:exon

position:1704779:1
position: 1704779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704937:1
position: 1704937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1706359-1706428:1:exon

position:1706359:1
position: 1706359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1706428:1
position: 1706428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1707873-1709695:1:exon

position:1707873:1
position: 1707873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EFCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: EFCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand and coiled-coil domain-containing protein 1
translation: GPPGPCSRERCREMVALERAEERAAEPLEEKGSLRELLEDARAALRSGDARRLALQVGLQKSPAGHKEEGSCFTGSKRPLTQKHSQTKCLQRVLKEMELVHSSRDGQIGEAIRFSQELEKELKSSQEALVSLEDCNRNLKREQAEMRRKVEEARHAVLNSLGKVKELEVRANEVPHLQGYIQQLESQLQHYRSAMERSHFTGREPVEGQEDEPCPKDIPAKPPCCASGCDEKRWRKLLSHLETCSTKGKDPGEPLGRISPLTEQPQLKGHQEKKLETNVEEGKGSLLEELQQKVEETEMLRMELQMVETERVRLSLVEEKLMDVLQLLQKLRDLNISKRALGKILLSTLESCRDPQPGQAQLSEVLDTLQQELTACELLHKEPVEQAESPQSLSNPLVISC
SIO_010081: EFCC1
subclass of: SO_0000673
so part of: EFCC1
location: join(<1677854..1678021,1679270..1679676,1698058..1698078,1699419..1699429,1700760..1700835,1702175..1702334,1704779..1704937,1706359..1706428,1707873..1708006)
location: region:1677854-1708006:1
so has part: feature:1677854-1678021:1:exon
so has part: feature:1679270-1679676:1:exon
so has part: feature:1698058-1698078:1:exon
so has part: feature:1699419-1699429:1:exon
so has part: feature:1700760-1700835:1:exon
so has part: feature:1702175-1702334:1:exon
so has part: feature:1704779-1704937:1:exon
so has part: feature:1706359-1706428:1:exon
so has part: feature:1707873-1708006:1:exon

XP_005052910.2
type: Protein
SIO_000068: ncbiprotein

position:1708006:1
position: 1708006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677854-1678021:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1679270-1679676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1698058-1698078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1699419-1699429:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1700760-1700835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1702175-1702334:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1704779-1704937:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1706359-1706428:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1707873-1708006:1:exon

RAB43
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RAB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1744751..1755341
location: region:1744751-1755341:1
so has part: feature:1744751-1755341:1:exon
subclass of: SO_0000010

101818131
type: Gene
SIO_000068: ncbigene

position:1744751:1
position: 1744751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1755341:1
position: 1755341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1744751-1755341:1:exon

RAB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RAB43
product: RAB43, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005052837.2
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: join(1744751..1744974,1753306..1753489,1754423..1755341)
location: region:1744751-1755341:1
so has part: feature:1744751-1744974:1:exon
so has part: feature:1753306-1753489:1:exon
so has part: feature:1754423-1755341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1744751-1744974:1:exon

position:1744974:1
position: 1744974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1753306-1753489:1:exon

position:1753306:1
position: 1753306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1753489:1
position: 1753489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1754423-1755341:1:exon

position:1754423:1
position: 1754423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RAB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-43
translation: MPGAAALGAGPDPEESYDFLFKLVLIGDASVGKTCLVQRFKTGAFSERQGSTIGVDFTMKSLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRGSFLSIPRWIEDVRKYAGSNIVQLLIGNKSDLSDLREVQLAEAQSLAERYDNIICAIETSAKDSSNVEEAFVKMATELMMRHGGPMFSEKSTDSIKLDSKDVGESWGCGC
SIO_010081: RAB43
subclass of: SO_0000673
so part of: RAB43
location: join(1744765..1744974,1753306..1753489,1754423..1754676)
location: region:1744765-1754676:1
so has part: feature:1744765-1744974:1:exon
so has part: feature:1753306-1753489:1:exon
so has part: feature:1754423-1754676:1:exon

XP_005052894.1
type: Protein
SIO_000068: ncbiprotein

position:1744765:1
position: 1744765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1754676:1
position: 1754676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1744765-1744974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1753306-1753489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1754423-1754676:1:exon

LOC101821411
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101821411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1764394..1777487)
location: region:1764394-1777487:-1
so has part: feature:1764394-1777487:-1:exon
subclass of: SO_0000010

101821411
type: Gene
SIO_000068: ncbigene

position:1764394:-1
position: 1764394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777487:-1
position: 1777487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1764394-1777487:-1:exon

LOC101821411
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101821411
product: cat eye syndrome critical region protein 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052852.1
SIO_010081: LOC101821411
subclass of: SO_0000673
so part of: LOC101821411
location: complement(join(1764394..1764961,1765275..1765365,1768522..1768710,1770529..1770703,1773382..1773415,1774581..1774674,1775370..1775482,1776138..1776347,1777446..1777487))
location: region:1764394-1777487:-1
so has part: feature:1777446-1777487:-1:exon
so has part: feature:1776138-1776347:-1:exon
so has part: feature:1775370-1775482:-1:exon
so has part: feature:1774581-1774674:-1:exon
so has part: feature:1773382-1773415:-1:exon
so has part: feature:1770529-1770703:-1:exon
so has part: feature:1768522-1768710:-1:exon
so has part: feature:1765275-1765365:-1:exon
so has part: feature:1764394-1764961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1777446-1777487:-1:exon

position:1777446:-1
position: 1777446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1776138-1776347:-1:exon

position:1776138:-1
position: 1776138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776347:-1
position: 1776347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1775370-1775482:-1:exon

position:1775370:-1
position: 1775370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1775482:-1
position: 1775482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1774581-1774674:-1:exon

position:1774581:-1
position: 1774581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1774674:-1
position: 1774674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1773382-1773415:-1:exon

position:1773382:-1
position: 1773382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1773415:-1
position: 1773415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1770529-1770703:-1:exon

position:1770529:-1
position: 1770529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1770703:-1
position: 1770703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1768522-1768710:-1:exon

position:1768522:-1
position: 1768522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1768710:-1
position: 1768710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1765275-1765365:-1:exon

position:1765275:-1
position: 1765275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765365:-1
position: 1765365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1764394-1764961:-1:exon

position:1764961:-1
position: 1764961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101821411
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101821411
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cat eye syndrome critical region protein 5-like
translation: MRYIYSVDVINSGCLSVLPSFGFLFDIDGVLVRGKTPIPAARTAFQKLVDSQGQFLVPVVFVTNAGNCLRQKKADQLSHLLGVPISQDQVMMSHSPLRMFKHYHEKCVLVSGQGPLLDIAQDLGFCQPITIDTLREKRPLLDAVDHDRRPNVLSPSAVELPKIEAVVLFGEPVRWETSLQLIIDVLLTSGYPGNPYEQESYPHIPVLACNMDLMWVAEAQSPRFGHGTFMVCLENIYKKITGKELKYEALMGKPSRLTYQYAEHLIRAQALQRSWEQPIQTLYAVGDNVMTDVYGANLYDRYLRASCGAGCVPRRRPPGCRCRSVLVCTGVYSPRAQPAPGPRGRPAFHGHRDFGFDPALVEPDHIVPDVDAAVDLVFRLENFAPH
SIO_010081: LOC101821411
subclass of: SO_0000673
so part of: LOC101821411
location: complement(join(1764749..1764961,1765275..1765365,1768522..1768710,1770529..1770703,1773382..1773415,1774581..1774674,1775370..1775482,1776138..1776347,1777446..1777487))
location: region:1764749-1777487:-1
so has part: feature:1777446-1777487:-1:exon
so has part: feature:1776138-1776347:-1:exon
so has part: feature:1775370-1775482:-1:exon
so has part: feature:1774581-1774674:-1:exon
so has part: feature:1773382-1773415:-1:exon
so has part: feature:1770529-1770703:-1:exon
so has part: feature:1768522-1768710:-1:exon
so has part: feature:1765275-1765365:-1:exon
so has part: feature:1764749-1764961:-1:exon

XP_005052909.1
type: Protein
SIO_000068: ncbiprotein

position:1764749:-1
position: 1764749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1777446-1777487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1776138-1776347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1775370-1775482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1774581-1774674:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1773382-1773415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1770529-1770703:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1768522-1768710:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1765275-1765365:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1764749-1764961:-1:exon

ISY1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1781905..1789423)
location: region:1781905-1789423:-1
so has part: feature:1781905-1789423:-1:exon
subclass of: SO_0000010

101821203
type: Gene
SIO_000068: ncbigene

position:1781905:-1
position: 1781905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789423:-1
position: 1789423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1781905-1789423:-1:exon

ISY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ISY1
product: ISY1 splicing factor homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016301492.1
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1781905..1782668,1782950..1783036,1784600..1784703,1784888..1785010,1785695..1785812,1785979..1786091,1786327..1786369,1786803..1786868,1787601..1787652,1788256..1788278,1789414..1789423))
location: region:1781905-1789423:-1
so has part: feature:1789414-1789423:-1:exon
so has part: feature:1788256-1788278:-1:exon
so has part: feature:1787601-1787652:-1:exon
so has part: feature:1786803-1786868:-1:exon
so has part: feature:1786327-1786369:-1:exon
so has part: feature:1785979-1786091:-1:exon
so has part: feature:1785695-1785812:-1:exon
so has part: feature:1784888-1785010:-1:exon
so has part: feature:1784600-1784703:-1:exon
so has part: feature:1782950-1783036:-1:exon
so has part: feature:1781905-1782668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1789414-1789423:-1:exon

position:1789414:-1
position: 1789414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1788256-1788278:-1:exon

position:1788256:-1
position: 1788256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1788278:-1
position: 1788278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1787601-1787652:-1:exon

position:1787601:-1
position: 1787601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787652:-1
position: 1787652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1786803-1786868:-1:exon

position:1786803:-1
position: 1786803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786868:-1
position: 1786868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1786327-1786369:-1:exon

position:1786327:-1
position: 1786327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786369:-1
position: 1786369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1785979-1786091:-1:exon

position:1785979:-1
position: 1785979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1786091:-1
position: 1786091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1785695-1785812:-1:exon

position:1785695:-1
position: 1785695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785812:-1
position: 1785812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1784888-1785010:-1:exon

position:1784888:-1
position: 1784888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785010:-1
position: 1785010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1784600-1784703:-1:exon

position:1784600:-1
position: 1784600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1784703:-1
position: 1784703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1782950-1783036:-1:exon

position:1782950:-1
position: 1782950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1783036:-1
position: 1783036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1781905-1782668:-1:exon

position:1782668:-1
position: 1782668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ISY1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ISY1
product: ISY1 splicing factor homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016301493.1
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1781905..1782668,1782950..1783036,1784600..1784703,1784888..1785010,1785695..1785812,1785979..1786091,1786327..1786369,1786803..1786868,1787601..1787652,1788256..1788278,1789378..1789403))
location: region:1781905-1789403:-1
so has part: feature:1789378-1789403:-1:exon
so has part: feature:1788256-1788278:-1:exon
so has part: feature:1787601-1787652:-1:exon
so has part: feature:1786803-1786868:-1:exon
so has part: feature:1786327-1786369:-1:exon
so has part: feature:1785979-1786091:-1:exon
so has part: feature:1785695-1785812:-1:exon
so has part: feature:1784888-1785010:-1:exon
so has part: feature:1784600-1784703:-1:exon
so has part: feature:1782950-1783036:-1:exon
so has part: feature:1781905-1782668:-1:exon

position:1789403:-1
position: 1789403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1789378-1789403:-1:exon

position:1789378:-1
position: 1789378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1788256-1788278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787601-1787652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786803-1786868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1786327-1786369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1785979-1786091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1785695-1785812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1784888-1785010:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1784600-1784703:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1782950-1783036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1781905-1782668:-1:exon

ISY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog isoform X1
translation: MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEYRIKELGGPDYARIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKDIDAEYYGYRDEDDGILEPLEQEHEKKVIAEAVEKWKMEREARLARGEEEEEENIYAVHEEESDEEGGKEREGEDGQQKFIAHVPVPTQQEIEEALVRRKKMELLQKYASETLLAQSEEAKTLLGL
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1782561..1782668,1782950..1783036,1784600..1784703,1784888..1785010,1785695..1785812,1785979..1786091,1786327..1786369,1786803..1786868,1787601..1787652,1788256..1788278,1789414..1789416))
location: region:1782561-1789416:-1
so has part: feature:1789414-1789416:-1:exon
so has part: feature:1788256-1788278:-1:exon
so has part: feature:1787601-1787652:-1:exon
so has part: feature:1786803-1786868:-1:exon
so has part: feature:1786327-1786369:-1:exon
so has part: feature:1785979-1786091:-1:exon
so has part: feature:1785695-1785812:-1:exon
so has part: feature:1784888-1785010:-1:exon
so has part: feature:1784600-1784703:-1:exon
so has part: feature:1782950-1783036:-1:exon
so has part: feature:1782561-1782668:-1:exon

XP_016156978.1
type: Protein
SIO_000068: ncbiprotein

position:1782561:-1
position: 1782561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789416:-1
position: 1789416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1789414-1789416:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788256-1788278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787601-1787652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786803-1786868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1786327-1786369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1785979-1786091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1785695-1785812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1784888-1785010:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1784600-1784703:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1782950-1783036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782561-1782668:-1:exon

ISY1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ISY1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ISY1 homolog isoform X2
translation: MARNAEKAMTALARFRQAQLEEGKVKERRPFLASECNELPKAEKWRRQIIGEISKKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEYRIKELGGPDYARIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEKEPLPPPRKTRAELMKDIDAEYYGYRDEDDGILEPLEQEHEKKVIAEAVEKWKMEREARLARGEEEEEENIYAVHEEESDEEGGKEREGEDGQQKFIAHVPVPTQQEIEEALVRRKKMELLQKYASETLLAQSEEAKTLLGL
SIO_010081: ISY1
subclass of: SO_0000673
so part of: ISY1
location: complement(join(1782561..1782668,1782950..1783036,1784600..1784703,1784888..1785010,1785695..1785812,1785979..1786091,1786327..1786369,1786803..1786868,1787601..1787652,1788256..1788278,1789378..1789380))
location: region:1782561-1789380:-1
so has part: feature:1789378-1789380:-1:exon
so has part: feature:1788256-1788278:-1:exon
so has part: feature:1787601-1787652:-1:exon
so has part: feature:1786803-1786868:-1:exon
so has part: feature:1786327-1786369:-1:exon
so has part: feature:1785979-1786091:-1:exon
so has part: feature:1785695-1785812:-1:exon
so has part: feature:1784888-1785010:-1:exon
so has part: feature:1784600-1784703:-1:exon
so has part: feature:1782950-1783036:-1:exon
so has part: feature:1782561-1782668:-1:exon

XP_016156979.1
type: Protein
SIO_000068: ncbiprotein

position:1789380:-1
position: 1789380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1789378-1789380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1788256-1788278:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1787601-1787652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1786803-1786868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1786327-1786369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1785979-1786091:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1785695-1785812:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1784888-1785010:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1784600-1784703:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1782950-1783036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782561-1782668:-1:exon

CNBP
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1790886..1793796)
location: region:1790886-1793796:-1
so has part: feature:1790886-1793796:-1:exon
subclass of: SO_0000010

101817548
type: Gene
SIO_000068: ncbigene

position:1790886:-1
position: 1790886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793796:-1
position: 1793796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1790886-1793796:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016301401.1
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1790886..1791952,1792772..1792973,1793147..1793242,1793508..1793796))
location: region:1790886-1793796:-1
so has part: feature:1793508-1793796:-1:exon
so has part: feature:1793147-1793242:-1:exon
so has part: feature:1792772-1792973:-1:exon
so has part: feature:1790886-1791952:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1793508-1793796:-1:exon

position:1793508:-1
position: 1793508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1793147-1793242:-1:exon

position:1793147:-1
position: 1793147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793242:-1
position: 1793242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1792772-1792973:-1:exon

position:1792772:-1
position: 1792772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1792973:-1
position: 1792973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1790886-1791952:-1:exon

position:1791952:-1
position: 1791952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052834.2
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1790886..1791952,1792772..1792973,1793147..1793239,1793508..1793783))
location: region:1790886-1793783:-1
so has part: feature:1793508-1793783:-1:exon
so has part: feature:1793147-1793239:-1:exon
so has part: feature:1792772-1792973:-1:exon
so has part: feature:1790886-1791952:-1:exon

position:1793783:-1
position: 1793783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1793508-1793783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1793147-1793239:-1:exon

position:1793239:-1
position: 1793239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1792772-1792973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1790886-1791952:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052833.2
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1790886..1791952,1792772..1792970,1793147..1793242,1793508..1793782))
location: region:1790886-1793782:-1
so has part: feature:1793508-1793782:-1:exon
so has part: feature:1793147-1793242:-1:exon
so has part: feature:1792772-1792970:-1:exon
so has part: feature:1790886-1791952:-1:exon

position:1793782:-1
position: 1793782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1793508-1793782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1793147-1793242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792772-1792970:-1:exon

position:1792970:-1
position: 1792970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1790886-1791952:-1:exon

CNBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CNBP
product: CCHC-type zinc finger nucleic acid binding protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052835.2
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1790886..1791952,1792772..1792970,1793147..1793239,1793508..1793765))
location: region:1790886-1793765:-1
so has part: feature:1793508-1793765:-1:exon
so has part: feature:1793147-1793239:-1:exon
so has part: feature:1792772-1792970:-1:exon
so has part: feature:1790886-1791952:-1:exon

position:1793765:-1
position: 1793765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1793508-1793765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1793147-1793239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792772-1792970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1790886-1791952:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X4
translation: MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1791835..1791952,1792772..1792970,1793147..1793239,1793508..1793610))
location: region:1791835-1793610:-1
so has part: feature:1793508-1793610:-1:exon
so has part: feature:1793147-1793239:-1:exon
so has part: feature:1792772-1792970:-1:exon
so has part: feature:1791835-1791952:-1:exon

XP_005052892.1
type: Protein
SIO_000068: ncbiprotein

position:1791835:-1
position: 1791835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793610:-1
position: 1793610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1793508-1793610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1793147-1793239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792772-1792970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1791835-1791952:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X3
translation: MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRGFQFMSSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1791835..1791952,1792772..1792973,1793147..1793239,1793508..1793610))
location: region:1791835-1793610:-1
so has part: feature:1793508-1793610:-1:exon
so has part: feature:1793147-1793239:-1:exon
so has part: feature:1792772-1792973:-1:exon
so has part: feature:1791835-1791952:-1:exon

XP_005052891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1793508-1793610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1793147-1793239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792772-1792973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1791835-1791952:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X2
translation: MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1791835..1791952,1792772..1792970,1793147..1793242,1793508..1793610))
location: region:1791835-1793610:-1
so has part: feature:1793508-1793610:-1:exon
so has part: feature:1793147-1793242:-1:exon
so has part: feature:1792772-1792970:-1:exon
so has part: feature:1791835-1791952:-1:exon

XP_005052890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1793508-1793610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1793147-1793242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792772-1792970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1791835-1791952:-1:exon

CNBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CNBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular nucleic acid-binding protein isoform X1
translation: MSSNECFKCGRTGHWARECPTGMGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCYRCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA
SIO_010081: CNBP
subclass of: SO_0000673
so part of: CNBP
location: complement(join(1791835..1791952,1792772..1792973,1793147..1793242,1793508..1793610))
location: region:1791835-1793610:-1
so has part: feature:1793508-1793610:-1:exon
so has part: feature:1793147-1793242:-1:exon
so has part: feature:1792772-1792973:-1:exon
so has part: feature:1791835-1791952:-1:exon

XP_016156887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1793508-1793610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1793147-1793242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1792772-1792973:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1791835-1791952:-1:exon

LOC101817350
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101817350
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1808106..1808837)
location: region:1808106-1808837:-1
so has part: feature:1808106-1808837:-1:exon

101817350
type: Gene
SIO_000068: ncbigene

position:1808106:-1
position: 1808106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808837:-1
position: 1808837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1808106-1808837:-1:exon

LOC101817350
type: Exon
subclass of: SO_0000147
RO_0002162: 59894
gene: LOC101817350
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101817350
subclass of: SO_0000673
so part of: LOC101817350
location: complement(1808106..1808837)
location: region:1808106-1808837:-1
so has part: feature:1808106-1808837:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1808106-1808837:-1:exon

RAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1859804..1901816
location: region:1859804-1901816:1
so has part: feature:1859804-1901816:1:exon
subclass of: SO_0000010

101816261
type: Gene
SIO_000068: ncbigene

position:1859804:1
position: 1859804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1901816:1
position: 1901816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1859804-1901816:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005052828.2
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1859804..1859836,1872603..1872658,1881308..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1901816)
location: region:1859804-1901816:1
so has part: feature:1859804-1859836:1:exon
so has part: feature:1872603-1872658:1:exon
so has part: feature:1881308-1881522:1:exon
so has part: feature:1882398-1882510:1:exon
so has part: feature:1883525-1883627:1:exon
so has part: feature:1885351-1885508:1:exon
so has part: feature:1886399-1886497:1:exon
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urn:…
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RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016301399.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1859804..1859836,1872603..1872658,1881308..1881356,1881640..1881805,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1901816)
location: region:1859804-1901816:1
so has part: feature:1859804-1859836:1:exon
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urn:…
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urn:…
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reference: sequence
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SIO_000628: feature:1889490-1889549:1:exon

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SIO_000628: feature:1891288-1891315:1:exon

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SIO_000300: 12
SIO_000628: feature:1891688-1891815:1:exon

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SIO_000628: feature:1892815-1892932:1:exon

urn:…
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SIO_000628: feature:1894441-1894525:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1895383-1895559:1:exon

urn:…
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urn:…
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SIO_000628: feature:1897644-1897762:1:exon

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SIO_000628: feature:1898963-1899094:1:exon

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SIO_000300: 19
SIO_000628: feature:1899631-1899765:1:exon

urn:…
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RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016301400.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1859805..1859836,1872603..1872658,1881308..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1901816)
location: region:1859805-1901816:1
so has part: feature:1859805-1859836:1:exon
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so has part: feature:1897644-1897762:1:exon
so has part: feature:1898963-1899094:1:exon
so has part: feature:1899631-1899765:1:exon
so has part: feature:1900817-1901816:1:exon

position:1859805:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:1859805-1859836:1:exon

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SIO_000300: 3
SIO_000628: feature:1881308-1881522:1:exon

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SIO_000300: 7
SIO_000628: feature:1887923-1888076:1:exon

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SIO_000300: 8
SIO_000628: feature:1889490-1889549:1:exon

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SIO_000628: feature:1891288-1891315:1:exon

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SIO_000628: feature:1891688-1891815:1:exon

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SIO_000628: feature:1894441-1894525:1:exon

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SIO_000300: 13
SIO_000628: feature:1895383-1895559:1:exon

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SIO_000628: feature:1896286-1896332:1:exon

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SIO_000300: 15
SIO_000628: feature:1897644-1897762:1:exon

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SIO_000300: 16
SIO_000628: feature:1898963-1899094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1900817-1901816:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005052830.2
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1859808..1859836,1872603..1872658,1881308..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1901816)
location: region:1859808-1901816:1
so has part: feature:1859808-1859836:1:exon
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so has part: feature:1898963-1899094:1:exon
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so has part: feature:1900817-1901816:1:exon

position:1859808:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:1859808-1859836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1872603-1872658:1:exon

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SIO_000300: 3
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SIO_000628: feature:1894441-1894525:1:exon

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SIO_000300: 13
SIO_000628: feature:1895383-1895559:1:exon

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SIO_000628: feature:1896286-1896332:1:exon

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SIO_000300: 15
SIO_000628: feature:1897644-1897762:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1898963-1899094:1:exon

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SIO_000300: 17
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1900817-1901816:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016301397.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1869294..1869416,1872603..1872658,1881308..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1901816)
location: region:1869294-1901816:1
so has part: feature:1869294-1869416:1:exon
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position:1869294:1
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urn:…
SIO_000300: 1
SIO_000628: feature:1869294-1869416:1:exon

position:1869416:1
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reference: sequence
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:1898963-1899094:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1900817-1901816:1:exon

RAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RAF1
product: Raf-1 proto-oncogene, serine/threonine kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016301398.1
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1872325..1872347,1872603..1872658,1881308..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1901816)
location: region:1872325-1901816:1
so has part: feature:1872325-1872347:1:exon
so has part: feature:1872603-1872658:1:exon
so has part: feature:1881308-1881522:1:exon
so has part: feature:1882398-1882510:1:exon
so has part: feature:1883525-1883627:1:exon
so has part: feature:1885351-1885508:1:exon
so has part: feature:1886399-1886497:1:exon
so has part: feature:1887923-1888076:1:exon
so has part: feature:1889490-1889549:1:exon
so has part: feature:1891288-1891315:1:exon
so has part: feature:1891688-1891815:1:exon
so has part: feature:1892815-1892932:1:exon
so has part: feature:1894441-1894525:1:exon
so has part: feature:1895383-1895559:1:exon
so has part: feature:1896286-1896332:1:exon
so has part: feature:1897644-1897762:1:exon
so has part: feature:1898963-1899094:1:exon
so has part: feature:1899631-1899765:1:exon
so has part: feature:1900817-1901816:1:exon

position:1872325:1
position: 1872325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1872325-1872347:1:exon

position:1872347:1
position: 1872347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1872603-1872658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1881308-1881522:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1882398-1882510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1883525-1883627:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1885351-1885508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1886399-1886497:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1887923-1888076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1889490-1889549:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1891288-1891315:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1891688-1891815:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1892815-1892932:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1894441-1894525:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1895383-1895559:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1896286-1896332:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1897644-1897762:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1898963-1899094:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1900817-1901816:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X1
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSSTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1881316..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1900957)
location: region:1881316-1900957:1
so has part: feature:1881316-1881522:1:exon
so has part: feature:1882398-1882510:1:exon
so has part: feature:1883525-1883627:1:exon
so has part: feature:1885351-1885508:1:exon
so has part: feature:1886399-1886497:1:exon
so has part: feature:1887923-1888076:1:exon
so has part: feature:1889490-1889549:1:exon
so has part: feature:1891288-1891315:1:exon
so has part: feature:1891688-1891815:1:exon
so has part: feature:1892815-1892932:1:exon
so has part: feature:1894441-1894525:1:exon
so has part: feature:1895383-1895559:1:exon
so has part: feature:1896286-1896332:1:exon
so has part: feature:1897644-1897762:1:exon
so has part: feature:1898963-1899094:1:exon
so has part: feature:1899631-1899765:1:exon
so has part: feature:1900817-1900957:1:exon

XP_016156883.1
type: Protein
SIO_000068: ncbiprotein

position:1881316:1
position: 1881316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900957:1
position: 1900957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1881316-1881522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882398-1882510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1883525-1883627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1885351-1885508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1886399-1886497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1887923-1888076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1889490-1889549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1891288-1891315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1891688-1891815:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1892815-1892932:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1894441-1894525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1895383-1895559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1896286-1896332:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1897644-1897762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1898963-1899094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1900817-1900957:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X1
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSSTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1881316..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1900957)
location: region:1881316-1900957:1
so has part: feature:1881316-1881522:1:exon
so has part: feature:1882398-1882510:1:exon
so has part: feature:1883525-1883627:1:exon
so has part: feature:1885351-1885508:1:exon
so has part: feature:1886399-1886497:1:exon
so has part: feature:1887923-1888076:1:exon
so has part: feature:1889490-1889549:1:exon
so has part: feature:1891288-1891315:1:exon
so has part: feature:1891688-1891815:1:exon
so has part: feature:1892815-1892932:1:exon
so has part: feature:1894441-1894525:1:exon
so has part: feature:1895383-1895559:1:exon
so has part: feature:1896286-1896332:1:exon
so has part: feature:1897644-1897762:1:exon
so has part: feature:1898963-1899094:1:exon
so has part: feature:1899631-1899765:1:exon
so has part: feature:1900817-1900957:1:exon

XP_016156884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1881316-1881522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882398-1882510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1883525-1883627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1885351-1885508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1886399-1886497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1887923-1888076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1889490-1889549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1891288-1891315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1891688-1891815:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1892815-1892932:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1894441-1894525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1895383-1895559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1896286-1896332:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1897644-1897762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1898963-1899094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1900817-1900957:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X1
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSSTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1881316..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1900957)
location: region:1881316-1900957:1
so has part: feature:1881316-1881522:1:exon
so has part: feature:1882398-1882510:1:exon
so has part: feature:1883525-1883627:1:exon
so has part: feature:1885351-1885508:1:exon
so has part: feature:1886399-1886497:1:exon
so has part: feature:1887923-1888076:1:exon
so has part: feature:1889490-1889549:1:exon
so has part: feature:1891288-1891315:1:exon
so has part: feature:1891688-1891815:1:exon
so has part: feature:1892815-1892932:1:exon
so has part: feature:1894441-1894525:1:exon
so has part: feature:1895383-1895559:1:exon
so has part: feature:1896286-1896332:1:exon
so has part: feature:1897644-1897762:1:exon
so has part: feature:1898963-1899094:1:exon
so has part: feature:1899631-1899765:1:exon
so has part: feature:1900817-1900957:1:exon

XP_005052885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1881316-1881522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882398-1882510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1883525-1883627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1885351-1885508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1886399-1886497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1887923-1888076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1889490-1889549:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1891288-1891315:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1891688-1891815:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1892815-1892932:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1894441-1894525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1895383-1895559:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1896286-1896332:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1897644-1897762:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1898963-1899094:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1900817-1900957:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X3
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSSTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRIIEDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1881316..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1900957)
location: region:1881316-1900957:1
so has part: feature:1881316-1881522:1:exon
so has part: feature:1882398-1882510:1:exon
so has part: feature:1883525-1883627:1:exon
so has part: feature:1885351-1885508:1:exon
so has part: feature:1886399-1886497:1:exon
so has part: feature:1887923-1888076:1:exon
so has part: feature:1891288-1891315:1:exon
so has part: feature:1891688-1891815:1:exon
so has part: feature:1892815-1892932:1:exon
so has part: feature:1894441-1894525:1:exon
so has part: feature:1895383-1895559:1:exon
so has part: feature:1896286-1896332:1:exon
so has part: feature:1897644-1897762:1:exon
so has part: feature:1898963-1899094:1:exon
so has part: feature:1899631-1899765:1:exon
so has part: feature:1900817-1900957:1:exon

XP_005052887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1881316-1881522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882398-1882510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1883525-1883627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1885351-1885508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1886399-1886497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1887923-1888076:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1891288-1891315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1891688-1891815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1892815-1892932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1894441-1894525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1895383-1895559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1896286-1896332:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1897644-1897762:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1898963-1899094:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1900817-1900957:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X4
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSSTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLFSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1881316..1881522,1882398..1882510,1883525..1883627,1885351..1885508,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1900957)
location: region:1881316-1900957:1
so has part: feature:1881316-1881522:1:exon
so has part: feature:1882398-1882510:1:exon
so has part: feature:1883525-1883627:1:exon
so has part: feature:1885351-1885508:1:exon
so has part: feature:1887923-1888076:1:exon
so has part: feature:1889490-1889549:1:exon
so has part: feature:1891288-1891315:1:exon
so has part: feature:1891688-1891815:1:exon
so has part: feature:1892815-1892932:1:exon
so has part: feature:1894441-1894525:1:exon
so has part: feature:1895383-1895559:1:exon
so has part: feature:1896286-1896332:1:exon
so has part: feature:1897644-1897762:1:exon
so has part: feature:1898963-1899094:1:exon
so has part: feature:1899631-1899765:1:exon
so has part: feature:1900817-1900957:1:exon

XP_016156886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1881316-1881522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882398-1882510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1883525-1883627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1885351-1885508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1887923-1888076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1889490-1889549:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1891288-1891315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1891688-1891815:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1892815-1892932:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1894441-1894525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1895383-1895559:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1896286-1896332:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1897644-1897762:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1898963-1899094:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1900817-1900957:1:exon

RAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RAF proto-oncogene serine/threonine-protein kinase isoform X2
translation: MEHIQGAWKTISNGFGLKDSVFDGPNCISPTIVQQFGYQRRASDDGKISDTSKTSSTIRVFLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLLAEPKGKKVRLDWNTDAASLIGEELRVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRIPVSSQHRYSTPHAFTFNPSNPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRIIENNSLNASPSSWCRRFCLRGRDAIRSHSESASPSALSGSPNNMSPTGWSQPKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSILWMAPEVIRMQDSNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCLKKVREERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLTSTRLPVF
SIO_010081: RAF1
subclass of: SO_0000673
so part of: RAF1
location: join(1881316..1881356,1881640..1881805,1882398..1882510,1883525..1883627,1885351..1885508,1886399..1886497,1887923..1888076,1889490..1889549,1891288..1891315,1891688..1891815,1892815..1892932,1894441..1894525,1895383..1895559,1896286..1896332,1897644..1897762,1898963..1899094,1899631..1899765,1900817..1900957)
location: region:1881316-1900957:1
so has part: feature:1881316-1881356:1:exon
so has part: feature:1881640-1881805:1:exon
so has part: feature:1882398-1882510:1:exon
so has part: feature:1883525-1883627:1:exon
so has part: feature:1885351-1885508:1:exon
so has part: feature:1886399-1886497:1:exon
so has part: feature:1887923-1888076:1:exon
so has part: feature:1889490-1889549:1:exon
so has part: feature:1891288-1891315:1:exon
so has part: feature:1891688-1891815:1:exon
so has part: feature:1892815-1892932:1:exon
so has part: feature:1894441-1894525:1:exon
so has part: feature:1895383-1895559:1:exon
so has part: feature:1896286-1896332:1:exon
so has part: feature:1897644-1897762:1:exon
so has part: feature:1898963-1899094:1:exon
so has part: feature:1899631-1899765:1:exon
so has part: feature:1900817-1900957:1:exon

XP_016156885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1881316-1881356:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1881640-1881805:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1882398-1882510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1883525-1883627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1885351-1885508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1886399-1886497:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1887923-1888076:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1889490-1889549:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1891288-1891315:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1891688-1891815:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1892815-1892932:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1894441-1894525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1895383-1895559:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1896286-1896332:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1897644-1897762:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1898963-1899094:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1899631-1899765:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1900817-1900957:1:exon

MKRN2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MKRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1903270..>1910737)
location: region:1903270-1910737:-1
so has part: feature:1903270-1910737:-1:exon
subclass of: SO_0000010

101821015
type: Gene
SIO_000068: ncbigene

position:1903270:-1
position: 1903270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910737:-1
position: 1910737
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1903270-1910737:-1:exon

MKRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MKRN2
product: makorin ring finger protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052850.1
SIO_010081: MKRN2
subclass of: SO_0000673
so part of: MKRN2
location: complement(join(1903270..1905202,1905671..1905815,1906265..1906375,1907246..1907460,1908219..1908605,1909591..1909627,1910274..1910402,1910643..>1910737))
location: region:1903270-1910737:-1
so has part: feature:1910643-1910737:-1:exon
so has part: feature:1910274-1910402:-1:exon
so has part: feature:1909591-1909627:-1:exon
so has part: feature:1908219-1908605:-1:exon
so has part: feature:1907246-1907460:-1:exon
so has part: feature:1906265-1906375:-1:exon
so has part: feature:1905671-1905815:-1:exon
so has part: feature:1903270-1905202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1910643-1910737:-1:exon

position:1910643:-1
position: 1910643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1910274-1910402:-1:exon

position:1910274:-1
position: 1910274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910402:-1
position: 1910402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1909591-1909627:-1:exon

position:1909591:-1
position: 1909591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909627:-1
position: 1909627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1908219-1908605:-1:exon

position:1908219:-1
position: 1908219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908605:-1
position: 1908605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1907246-1907460:-1:exon

position:1907246:-1
position: 1907246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1907460:-1
position: 1907460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1906265-1906375:-1:exon

position:1906265:-1
position: 1906265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906375:-1
position: 1906375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1905671-1905815:-1:exon

position:1905671:-1
position: 1905671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905815:-1
position: 1905815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1903270-1905202:-1:exon

position:1905202:-1
position: 1905202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MKRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MKRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase makorin-2
translation: SPAGCPGNKRGQDGRAPAGLLGEVLLTERALGYYLQGVCREGSKCQFSHDLATSKSSTICKYYQKGQCAYGSRCRYDHVRLPAAGGAKSWDLEGRGRWGLSAAPCACPADLCGPGEEQQRPGAPSGPGAALCCGQPGDGEEAKPHSYLEAICSGLEEPGAGGCPQPGAAEQLCPYAAAGACHFGERCLYLHGQLCEICGLQVLHPFDQEQRKAHEMMCMATFEHDMERAFAIQASQDKVCSICMEVVYEKPSASERRFGILSNCTHTYCLSCIRQWRCAKQFENPIIKSCPECRVISEFVIPSVYWVEEQEKKNELIEAFKQGVGKKPCKYFEQGKGTCPFGGKCLYLHAYPDGTRAEPEKPRKQLSSEGTVRFFNSVRLWDFIEDRESRSAPGADGEVAELGELFMHLSGAEEEPAAAP
SIO_010081: MKRN2
subclass of: SO_0000673
so part of: MKRN2
location: complement(join(1905059..1905202,1905671..1905815,1906265..1906375,1907246..1907460,1908219..1908605,1909591..1909627,1910274..1910402,1910643..>1910737))
location: region:1905059-1910737:-1
so has part: feature:1910643-1910737:-1:exon
so has part: feature:1910274-1910402:-1:exon
so has part: feature:1909591-1909627:-1:exon
so has part: feature:1908219-1908605:-1:exon
so has part: feature:1907246-1907460:-1:exon
so has part: feature:1906265-1906375:-1:exon
so has part: feature:1905671-1905815:-1:exon
so has part: feature:1905059-1905202:-1:exon

XP_005052907.1
type: Protein
SIO_000068: ncbiprotein

position:1905059:-1
position: 1905059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1910643-1910737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1910274-1910402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1909591-1909627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1908219-1908605:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1907246-1907460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1906265-1906375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1905671-1905815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1905059-1905202:-1:exon

MKRN2OS
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MKRN2OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1910737..1916431
location: region:1910737-1916431:1
so has part: feature:1910737-1916431:1:exon
subclass of: SO_0000010

101820827
type: Gene
SIO_000068: ncbigene

position:1910737:1
position: 1910737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1916431:1
position: 1916431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1910737-1916431:1:exon

MKRN2OS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MKRN2OS
product: MKRN2 opposite strand
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052849.2
SIO_010081: MKRN2OS
subclass of: SO_0000673
so part of: MKRN2OS
location: join(1910737..1910796,1911875..1912103,1912702..1912864,1915772..1916431)
location: region:1910737-1916431:1
so has part: feature:1910737-1910796:1:exon
so has part: feature:1911875-1912103:1:exon
so has part: feature:1912702-1912864:1:exon
so has part: feature:1915772-1916431:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1910737-1910796:1:exon

position:1910796:1
position: 1910796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1911875-1912103:1:exon

position:1911875:1
position: 1911875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912103:1
position: 1912103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1912702-1912864:1:exon

position:1912702:1
position: 1912702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1912864:1
position: 1912864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1915772-1916431:1:exon

position:1915772:1
position: 1915772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MKRN2OS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MKRN2OS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MKRN2 opposite strand protein
translation: MAQGRGRGWLGGHARGAGRSGRGRETGRQWRGKDRGREGRARAQGSPVGERSPLRSARSSARPGWAGTLLSLSALCSSRSGYDGHSDLHVGITNSQGMVYHYDQEGVHRSASGWEQCICIPLVQPDMWELLQLWDNLLEEFSWEEAWLPHRYDEQQHNCFTFALAFVNRVRHGRGREPLSKAHFTESFLLPHTREASRYLTLHQQLAHTDVYIVPLAEQEQDSVAANHSLLE
SIO_010081: MKRN2OS
subclass of: SO_0000673
so part of: MKRN2OS
location: join(1910737..1910796,1911875..1912103,1912702..1912864,1915772..1916018)
location: region:1910737-1916018:1
so has part: feature:1910737-1910796:1:exon
so has part: feature:1911875-1912103:1:exon
so has part: feature:1912702-1912864:1:exon
so has part: feature:1915772-1916018:1:exon

XP_005052906.1
type: Protein
SIO_000068: ncbiprotein

position:1916018:1
position: 1916018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1910737-1910796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1911875-1912103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1912702-1912864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1915772-1916018:1:exon

TSEN2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1916566..1927445)
location: region:1916566-1927445:-1
so has part: feature:1916566-1927445:-1:exon
subclass of: SO_0000010

101815935
type: Gene
SIO_000068: ncbigene

position:1916566:-1
position: 1916566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1927445:-1
position: 1927445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1916566-1927445:-1:exon

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005052823.2
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1916566..1917104,1917536..1917625,1918950..1919061,1919687..1919723,1920715..1920853,1921491..1921541,1922362..1922439,1922530..1923055,1924763..1924799,1925489..1925570,1926318..1926507,1927427..1927445))
location: region:1916566-1927445:-1
so has part: feature:1927427-1927445:-1:exon
so has part: feature:1926318-1926507:-1:exon
so has part: feature:1925489-1925570:-1:exon
so has part: feature:1924763-1924799:-1:exon
so has part: feature:1922530-1923055:-1:exon
so has part: feature:1922362-1922439:-1:exon
so has part: feature:1921491-1921541:-1:exon
so has part: feature:1920715-1920853:-1:exon
so has part: feature:1919687-1919723:-1:exon
so has part: feature:1918950-1919061:-1:exon
so has part: feature:1917536-1917625:-1:exon
so has part: feature:1916566-1917104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1927427-1927445:-1:exon

position:1927427:-1
position: 1927427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1926318-1926507:-1:exon

position:1926318:-1
position: 1926318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926507:-1
position: 1926507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1925489-1925570:-1:exon

position:1925489:-1
position: 1925489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1925570:-1
position: 1925570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1924763-1924799:-1:exon

position:1924763:-1
position: 1924763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1924799:-1
position: 1924799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1922530-1923055:-1:exon

position:1922530:-1
position: 1922530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1923055:-1
position: 1923055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1922362-1922439:-1:exon

position:1922362:-1
position: 1922362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1922439:-1
position: 1922439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1921491-1921541:-1:exon

position:1921491:-1
position: 1921491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1921541:-1
position: 1921541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1920715-1920853:-1:exon

position:1920715:-1
position: 1920715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1920853:-1
position: 1920853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1919687-1919723:-1:exon

position:1919687:-1
position: 1919687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1919723:-1
position: 1919723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1918950-1919061:-1:exon

position:1918950:-1
position: 1918950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1919061:-1
position: 1919061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1917536-1917625:-1:exon

position:1917536:-1
position: 1917536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1917625:-1
position: 1917625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1916566-1917104:-1:exon

position:1917104:-1
position: 1917104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSEN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSEN2
product: tRNA splicing endonuclease subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005052822.2
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1916566..1917104,1917536..1917625,1918950..1919061,1919687..1919723,1920715..1920853,1921491..1921541,1922362..1922439,1922530..1923055,1924763..1924799,1925489..1925570,1926318..1927116))
location: region:1916566-1927116:-1
so has part: feature:1926318-1927116:-1:exon
so has part: feature:1925489-1925570:-1:exon
so has part: feature:1924763-1924799:-1:exon
so has part: feature:1922530-1923055:-1:exon
so has part: feature:1922362-1922439:-1:exon
so has part: feature:1921491-1921541:-1:exon
so has part: feature:1920715-1920853:-1:exon
so has part: feature:1919687-1919723:-1:exon
so has part: feature:1918950-1919061:-1:exon
so has part: feature:1917536-1917625:-1:exon
so has part: feature:1916566-1917104:-1:exon

position:1927116:-1
position: 1927116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1926318-1927116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1925489-1925570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1924763-1924799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922530-1923055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1922362-1922439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1921491-1921541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1920715-1920853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1919687-1919723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1918950-1919061:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1917536-1917625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1916566-1917104:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2
translation: MAEAVFHPPRRKRRVFESYEAPFPVDVGGKDFRLCQAEIINNNVIVRNPEDIEQLYNKGYFGKGILSRSRPVFSISDPLLVAKWRGVNTNMPIITSQKYQRRVQWAKSVLQEQGLDDCSITRILESYTKPLGLPFSRGDGAEQTGDSCPRGGPKPGPAELSRNSAGTEGAQSPEGQNGGSEEGDAAMGPGSGSREQEQGDSREQEQGDSREMPEGSCHRDPPVLRGCEVKQSPEQRAWEGMDSRECAPEYVLVQEEEEGSSCPEDDSTHAQENLVKKEVLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEESLSIVKLWEVFSEVKPDFKTTYMAYHYFRGKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIAELVDDNFEGSLRRPLSWMSLSGLNRTTANASKELMLCYLIRPSDMTAEEMSTPECMKRIKVQELIVTRWVSSRERSEQDEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1917045..1917104,1917536..1917625,1918950..1919061,1919687..1919723,1920715..1920853,1921491..1921541,1922362..1922439,1922530..1923055,1924763..1924799,1925489..1925570,1926318..1926491))
location: region:1917045-1926491:-1
so has part: feature:1926318-1926491:-1:exon
so has part: feature:1925489-1925570:-1:exon
so has part: feature:1924763-1924799:-1:exon
so has part: feature:1922530-1923055:-1:exon
so has part: feature:1922362-1922439:-1:exon
so has part: feature:1921491-1921541:-1:exon
so has part: feature:1920715-1920853:-1:exon
so has part: feature:1919687-1919723:-1:exon
so has part: feature:1918950-1919061:-1:exon
so has part: feature:1917536-1917625:-1:exon
so has part: feature:1917045-1917104:-1:exon

XP_005052879.1
type: Protein
SIO_000068: ncbiprotein

position:1917045:-1
position: 1917045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1926491:-1
position: 1926491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1926318-1926491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1925489-1925570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1924763-1924799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922530-1923055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1922362-1922439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1921491-1921541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1920715-1920853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1919687-1919723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1918950-1919061:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1917536-1917625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917045-1917104:-1:exon

TSEN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSEN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen2
translation: MAEAVFHPPRRKRRVFESYEAPFPVDVGGKDFRLCQAEIINNNVIVRNPEDIEQLYNKGYFGKGILSRSRPVFSISDPLLVAKWRGVNTNMPIITSQKYQRRVQWAKSVLQEQGLDDCSITRILESYTKPLGLPFSRGDGAEQTGDSCPRGGPKPGPAELSRNSAGTEGAQSPEGQNGGSEEGDAAMGPGSGSREQEQGDSREQEQGDSREMPEGSCHRDPPVLRGCEVKQSPEQRAWEGMDSRECAPEYVLVQEEEEGSSCPEDDSTHAQENLVKKEVLVCRKNPFRIFEYLQLSLEEAFFLVYALGCLSIYYGEESLSIVKLWEVFSEVKPDFKTTYMAYHYFRGKGWVPKVGLKYGTDLLLYRKGPPFYHASYSVIAELVDDNFEGSLRRPLSWMSLSGLNRTTANASKELMLCYLIRPSDMTAEEMSTPECMKRIKVQELIVTRWVSSRERSEQDEF
SIO_010081: TSEN2
subclass of: SO_0000673
so part of: TSEN2
location: complement(join(1917045..1917104,1917536..1917625,1918950..1919061,1919687..1919723,1920715..1920853,1921491..1921541,1922362..1922439,1922530..1923055,1924763..1924799,1925489..1925570,1926318..1926491))
location: region:1917045-1926491:-1
so has part: feature:1926318-1926491:-1:exon
so has part: feature:1925489-1925570:-1:exon
so has part: feature:1924763-1924799:-1:exon
so has part: feature:1922530-1923055:-1:exon
so has part: feature:1922362-1922439:-1:exon
so has part: feature:1921491-1921541:-1:exon
so has part: feature:1920715-1920853:-1:exon
so has part: feature:1919687-1919723:-1:exon
so has part: feature:1918950-1919061:-1:exon
so has part: feature:1917536-1917625:-1:exon
so has part: feature:1917045-1917104:-1:exon

XP_005052880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1926318-1926491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1925489-1925570:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1924763-1924799:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1922530-1923055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1922362-1922439:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1921491-1921541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1920715-1920853:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1919687-1919723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1918950-1919061:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1917536-1917625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1917045-1917104:-1:exon

PPARG
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PPARG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1964858..1985779)
location: region:1964858-1985779:-1
so has part: feature:1964858-1985779:-1:exon
subclass of: SO_0000010

101815733
type: Gene
SIO_000068: ncbigene

position:1964858:-1
position: 1964858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985779:-1
position: 1985779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1964858-1985779:-1:exon

PPARG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PPARG
product: peroxisome proliferator activated receptor gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016301481.1
SIO_010081: PPARG
subclass of: SO_0000673
so part of: PPARG
location: complement(join(1964858..1965284,1971643..1972093,1976723..1976922,1981952..1982090,1983494..1983663,1985555..1985779))
location: region:1964858-1985779:-1
so has part: feature:1985555-1985779:-1:exon
so has part: feature:1983494-1983663:-1:exon
so has part: feature:1981952-1982090:-1:exon
so has part: feature:1976723-1976922:-1:exon
so has part: feature:1971643-1972093:-1:exon
so has part: feature:1964858-1965284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1985555-1985779:-1:exon

position:1985555:-1
position: 1985555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1983494-1983663:-1:exon

position:1983494:-1
position: 1983494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1983663:-1
position: 1983663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1981952-1982090:-1:exon

position:1981952:-1
position: 1981952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1982090:-1
position: 1982090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1976723-1976922:-1:exon

position:1976723:-1
position: 1976723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1976922:-1
position: 1976922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1971643-1972093:-1:exon

position:1971643:-1
position: 1971643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972093:-1
position: 1972093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1964858-1965284:-1:exon

position:1965284:-1
position: 1965284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPARG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PPARG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisome proliferator-activated receptor gamma
translation: MVDTEMPFWPLNFGISPVDLSAMDDHTHSFDIKPFTTVDFSSISSPHYEDLPLARAEQSGLDYKYDIKLQDCQSAIKMEPPSPPYFSEKVQLYSKPQEEASSSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDQIKCKHVSPLQEENKEVAIRIFQRCQFRSVEAVQEITEFAKSIPGFVSLDLNDQVTLLKYGVHEIIYTLLASLMNKDGVLISEGQGFMTREFLKSLRKPFCDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
SIO_010081: PPARG
subclass of: SO_0000673
so part of: PPARG
location: complement(join(1965037..1965284,1971643..1972093,1976723..1976922,1981952..1982090,1983494..1983663,1985555..1985774))
location: region:1965037-1985774:-1
so has part: feature:1985555-1985774:-1:exon
so has part: feature:1983494-1983663:-1:exon
so has part: feature:1981952-1982090:-1:exon
so has part: feature:1976723-1976922:-1:exon
so has part: feature:1971643-1972093:-1:exon
so has part: feature:1965037-1965284:-1:exon

XP_016156967.1
type: Protein
SIO_000068: ncbiprotein

position:1965037:-1
position: 1965037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985774:-1
position: 1985774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1985555-1985774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1983494-1983663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1981952-1982090:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1976723-1976922:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1971643-1972093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1965037-1965284:-1:exon

SYN2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SYN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2052386..>2220746)
location: region:2052386-2220746:-1
so has part: feature:2052386-2220746:-1:exon
subclass of: SO_0000010

101820625
type: Gene
SIO_000068: ncbigene

position:2052386:-1
position: 2052386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2220746:-1
position: 2220746
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2052386-2220746:-1:exon

SYN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SYN2
product: synapsin II
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052848.1
SIO_010081: SYN2
subclass of: SO_0000673
so part of: SYN2
location: complement(join(2052386..2053419,2055808..2056069,2059889..2059949,2074195..2074344,2082123..2082225,2086143..2086217,2091071..2091213,2093521..2093583,2133842..2133931,2152062..2152218,2156666..2156757,2159212..2159269,2220643..>2220746))
location: region:2052386-2220746:-1
so has part: feature:2220643-2220746:-1:exon
so has part: feature:2159212-2159269:-1:exon
so has part: feature:2156666-2156757:-1:exon
so has part: feature:2152062-2152218:-1:exon
so has part: feature:2133842-2133931:-1:exon
so has part: feature:2093521-2093583:-1:exon
so has part: feature:2091071-2091213:-1:exon
so has part: feature:2086143-2086217:-1:exon
so has part: feature:2082123-2082225:-1:exon
so has part: feature:2074195-2074344:-1:exon
so has part: feature:2059889-2059949:-1:exon
so has part: feature:2055808-2056069:-1:exon
so has part: feature:2052386-2053419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2220643-2220746:-1:exon

position:2220643:-1
position: 2220643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2159212-2159269:-1:exon

position:2159212:-1
position: 2159212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2159269:-1
position: 2159269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2156666-2156757:-1:exon

position:2156666:-1
position: 2156666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2156757:-1
position: 2156757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2152062-2152218:-1:exon

position:2152062:-1
position: 2152062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2152218:-1
position: 2152218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2133842-2133931:-1:exon

position:2133842:-1
position: 2133842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2133931:-1
position: 2133931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2093521-2093583:-1:exon

position:2093521:-1
position: 2093521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2093583:-1
position: 2093583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2091071-2091213:-1:exon

position:2091071:-1
position: 2091071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2091213:-1
position: 2091213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2086143-2086217:-1:exon

position:2086143:-1
position: 2086143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2086217:-1
position: 2086217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2082123-2082225:-1:exon

position:2082123:-1
position: 2082123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2082225:-1
position: 2082225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2074195-2074344:-1:exon

position:2074195:-1
position: 2074195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2074344:-1
position: 2074344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2059889-2059949:-1:exon

position:2059889:-1
position: 2059889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2059949:-1
position: 2059949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2055808-2056069:-1:exon

position:2055808:-1
position: 2055808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2056069:-1
position: 2056069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2052386-2053419:-1:exon

position:2053419:-1
position: 2053419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SYN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synapsin-2
translation: GGASAGLVDASAAVSAAVGRKFKLLLVIDEPHTDWAKAFRGKKIHGEYDIKVEQAEFSEINLIAHADGNYAVDIQIIRNGTKVVRTFRPDFVLVRQHSYSMAENEDFRNLIIGMQYAGVPSVNSLESIYNFCDKPWVFAQLVSVYKTLGPEKFPLIEQTFYPNHKEMLTMPTFPVVVKIGHAHSGMGKIKVDNHYDFQDIASVVALTQTYATTEPFIDSKYDIRIQKIGSNYKAYMRTSISGNWKTNTGSAMLEQIAMSDKYKLWVDTCSEIFGGLDICAVKAVHGKDGKDYIFEVMDCAMPLIGEHQAEDRQHITELVVSKMNQMLSKTPIPSPQRPTATQQPQSGSLKEPEPNKIPPQRPPPQGGPVQPQGMQSQSQEPLQPQRVFPAGQAAKPAASQPQRPPGPTTQQPRPQAQGPPSSRLSKEAEPQPQPQPEPQPAPQQKPQSHPQLNKSQSLTNAFSFTESSFFRSSVNEDEAKAETIRNLRKSFASLFSD
SIO_010081: SYN2
subclass of: SO_0000673
so part of: SYN2
location: complement(join(2053284..2053419,2055808..2056069,2059889..2059949,2074195..2074344,2082123..2082225,2086143..2086217,2091071..2091213,2093521..2093583,2133842..2133931,2152062..2152218,2156666..2156757,2159212..2159269,2220643..>2220746))
location: region:2053284-2220746:-1
so has part: feature:2220643-2220746:-1:exon
so has part: feature:2159212-2159269:-1:exon
so has part: feature:2156666-2156757:-1:exon
so has part: feature:2152062-2152218:-1:exon
so has part: feature:2133842-2133931:-1:exon
so has part: feature:2093521-2093583:-1:exon
so has part: feature:2091071-2091213:-1:exon
so has part: feature:2086143-2086217:-1:exon
so has part: feature:2082123-2082225:-1:exon
so has part: feature:2074195-2074344:-1:exon
so has part: feature:2059889-2059949:-1:exon
so has part: feature:2055808-2056069:-1:exon
so has part: feature:2053284-2053419:-1:exon

XP_005052905.1
type: Protein
SIO_000068: ncbiprotein

position:2053284:-1
position: 2053284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2220643-2220746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2159212-2159269:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156666-2156757:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152062-2152218:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2133842-2133931:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2093521-2093583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2091071-2091213:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2086143-2086217:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2082123-2082225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2074195-2074344:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2059889-2059949:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2055808-2056069:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2053284-2053419:-1:exon

TIMP4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TIMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2102267..2129474
location: region:2102267-2129474:1
so has part: feature:2102267-2129474:1:exon
subclass of: SO_0000010

101815548
type: Gene
SIO_000068: ncbigene

position:2102267:1
position: 2102267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2129474:1
position: 2129474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2102267-2129474:1:exon

TIMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TIMP4
product: TIMP metallopeptidase inhibitor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052820.2
SIO_010081: TIMP4
subclass of: SO_0000673
so part of: TIMP4
location: join(2102267..2102575,2121432..2121545,2125910..2126024,2126668..2126792,2129125..2129474)
location: region:2102267-2129474:1
so has part: feature:2102267-2102575:1:exon
so has part: feature:2121432-2121545:1:exon
so has part: feature:2125910-2126024:1:exon
so has part: feature:2126668-2126792:1:exon
so has part: feature:2129125-2129474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2102267-2102575:1:exon

position:2102575:1
position: 2102575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2121432-2121545:1:exon

position:2121432:1
position: 2121432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2121545:1
position: 2121545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2125910-2126024:1:exon

position:2125910:1
position: 2125910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2126024:1
position: 2126024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2126668-2126792:1:exon

position:2126668:1
position: 2126668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2126792:1
position: 2126792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2129125-2129474:1:exon

position:2129125:1
position: 2129125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TIMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metalloproteinase inhibitor 4
translation: MSFELREGGAGARRRGHKCEGPVAARAVWRRRAAEHPRASGASPGERRIPEHPRASPGPRSGLQLHESLSPERSMSRAGSGTPGSPGGRGAALVLALALAALPSLSLPVIRAKISSEKVVPASDDPLDTHKMIRYEIKQIKMFKGFEKLKDVQYVYTPFDSSLCGVKLEANNKKQYLLTGQILSDGKVLIHLCNYIEPWDDLSLSQKKSLNQRYQMGCGCKITTCYSVPCSISAPNECLWTDWLLERRLQGHQARHYACIQRSDGTCSWYRGGPPPEKDFVDISEP
SIO_010081: TIMP4
subclass of: SO_0000673
so part of: TIMP4
location: join(2102267..2102575,2121432..2121545,2125910..2126024,2126668..2126792,2129125..2129322)
location: region:2102267-2129322:1
so has part: feature:2102267-2102575:1:exon
so has part: feature:2121432-2121545:1:exon
so has part: feature:2125910-2126024:1:exon
so has part: feature:2126668-2126792:1:exon
so has part: feature:2129125-2129322:1:exon

XP_005052877.2
type: Protein
SIO_000068: ncbiprotein

position:2129322:1
position: 2129322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2102267-2102575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2121432-2121545:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2125910-2126024:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2126668-2126792:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2129125-2129322:1:exon

TAMM41
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2282676..2302014
location: region:2282676-2302014:1
so has part: feature:2282676-2302014:1:exon
subclass of: SO_0000010

101815346
type: Gene
SIO_000068: ncbigene

position:2282676:1
position: 2282676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2302014:1
position: 2302014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2282676-2302014:1:exon

TAMM41
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TAMM41
product: TAM41 mitochondrial translocator assembly and maintenance homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052819.2
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2282676..2282753,2283268..2283300,2284070..2284249,2285662..2285754,2288166..2288316,2290510..2290655,2292711..2292876,2294952..2295014,2301890..2302014)
location: region:2282676-2302014:1
so has part: feature:2282676-2282753:1:exon
so has part: feature:2283268-2283300:1:exon
so has part: feature:2284070-2284249:1:exon
so has part: feature:2285662-2285754:1:exon
so has part: feature:2288166-2288316:1:exon
so has part: feature:2290510-2290655:1:exon
so has part: feature:2292711-2292876:1:exon
so has part: feature:2294952-2295014:1:exon
so has part: feature:2301890-2302014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2282676-2282753:1:exon

position:2282753:1
position: 2282753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2283268-2283300:1:exon

position:2283268:1
position: 2283268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2283300:1
position: 2283300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2284070-2284249:1:exon

position:2284070:1
position: 2284070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2284249:1
position: 2284249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2285662-2285754:1:exon

position:2285662:1
position: 2285662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2285754:1
position: 2285754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2288166-2288316:1:exon

position:2288166:1
position: 2288166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2288316:1
position: 2288316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2290510-2290655:1:exon

position:2290510:1
position: 2290510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2290655:1
position: 2290655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2292711-2292876:1:exon

position:2292711:1
position: 2292711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2292876:1
position: 2292876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2294952-2295014:1:exon

position:2294952:1
position: 2294952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2295014:1
position: 2295014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2301890-2302014:1:exon

position:2301890:1
position: 2301890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAMM41
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TAMM41
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidate cytidylyltransferase, mitochondrial
translation: MPRPGRRGRSAAPRSALGPSCRRRGRPQAGASAERGETNMLDFVFAVDDAVTWHMTNLLKNRSHYSFLKFFGPKKISTIQKYGAGIYYNTLVPCNDRMIKYGVISTDALIEDLFHWKTLYVAGRLQKPVKILAQNENSRLQAALVSNLKSAVTAAFLMLPESFSEEELYMQIAGLSYSGDFRMIIGEDKSKVQNIVKPNVAHFQKLYSTILQDCPQVVYKHHLGRLEIDKSPEGQFTQLMALPKTLQQKITALVSPPGKNRDVEEILLQVAHDPDCGFVVHQGISGIVRPSSIVQSAKTILTAGAKKSITYSLKKLYKMTKGGLKKTS
SIO_010081: TAMM41
subclass of: SO_0000673
so part of: TAMM41
location: join(2282676..2282753,2283268..2283300,2284070..2284249,2285662..2285754,2288166..2288316,2290510..2290655,2292711..2292876,2294952..2295014,2301890..2301966)
location: region:2282676-2301966:1
so has part: feature:2282676-2282753:1:exon
so has part: feature:2283268-2283300:1:exon
so has part: feature:2284070-2284249:1:exon
so has part: feature:2285662-2285754:1:exon
so has part: feature:2288166-2288316:1:exon
so has part: feature:2290510-2290655:1:exon
so has part: feature:2292711-2292876:1:exon
so has part: feature:2294952-2295014:1:exon
so has part: feature:2301890-2301966:1:exon

XP_005052876.2
type: Protein
SIO_000068: ncbiprotein

position:2301966:1
position: 2301966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2282676-2282753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2283268-2283300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2284070-2284249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2285662-2285754:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2288166-2288316:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2290510-2290655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2292711-2292876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2294952-2295014:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2301890-2301966:1:exon

VGLL4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2320750..2395814
location: region:2320750-2395814:1
so has part: feature:2320750-2395814:1:exon
subclass of: SO_0000010

101814888
type: Gene
SIO_000068: ncbigene

position:2320750:1
position: 2320750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2395814:1
position: 2395814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2320750-2395814:1:exon

VGLL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: VGLL4
product: vestigial like family member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_005052818.2
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2320750..2320824,2372411..2372597,2389031..2389253,2393324..2393438,2395473..2395814)
location: region:2320750-2395814:1
so has part: feature:2320750-2320824:1:exon
so has part: feature:2372411-2372597:1:exon
so has part: feature:2389031-2389253:1:exon
so has part: feature:2393324-2393438:1:exon
so has part: feature:2395473-2395814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2320750-2320824:1:exon

position:2320824:1
position: 2320824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2372411-2372597:1:exon

position:2372411:1
position: 2372411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2372597:1
position: 2372597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2389031-2389253:1:exon

position:2389031:1
position: 2389031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389253:1
position: 2389253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2393324-2393438:1:exon

position:2393324:1
position: 2393324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2393438:1
position: 2393438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2395473-2395814:1:exon

position:2395473:1
position: 2395473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 4 isoform X3
translation: METPLDVLSRAASLVHADDEKREAALRGEPRMQPLQSPALSNHRTGPPPISPSKRKLSMDQGDEELDCESDHVSKMSRMFNPHLSKPANGDYRKEHRERSRSPIERAAAPTMSLHANHMYASIPSLSMEQPLALTKNSVDAARTVGISPSLSSVERQQNRPSVITCASANNRNCNLSHCPIAHSACSGAAYRRPSSSSAACDPVVEEHFRRSLGKNYKEPEPAANSVSITGSVDDHFAKALGDTWLQLKAAKDGAGGSPEAAARRGRGSPSSSHLLSHSHSPSVLS
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2320761..2320824,2372411..2372597,2389031..2389253,2393324..2393438,2395473..2395744)
location: region:2320761-2395744:1
so has part: feature:2320761-2320824:1:exon
so has part: feature:2372411-2372597:1:exon
so has part: feature:2389031-2389253:1:exon
so has part: feature:2393324-2393438:1:exon
so has part: feature:2395473-2395744:1:exon

XP_005052875.1
type: Protein
SIO_000068: ncbiprotein

position:2320761:1
position: 2320761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2395744:1
position: 2395744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2320761-2320824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2372411-2372597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2389031-2389253:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2393324-2393438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2395473-2395744:1:exon

VGLL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: VGLL4
product: vestigial like family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052817.1
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2344420..2344732,2372411..2372597,2389034..2389253,2393324..2393438,2395473..2395814)
location: region:2344420-2395814:1
so has part: feature:2344420-2344732:1:exon
so has part: feature:2372411-2372597:1:exon
so has part: feature:2389034-2389253:1:exon
so has part: feature:2393324-2393438:1:exon
so has part: feature:2395473-2395814:1:exon

position:2344420:1
position: 2344420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2344420-2344732:1:exon

position:2344732:1
position: 2344732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2372411-2372597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2389034-2389253:1:exon

position:2389034:1
position: 2389034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2393324-2393438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2395473-2395814:1:exon

VGLL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: VGLL4
product: vestigial like family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052816.2
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2344651..2344732,2372411..2372597,2389031..2389253,2393324..2393438,2395473..2395814)
location: region:2344651-2395814:1
so has part: feature:2344651-2344732:1:exon
so has part: feature:2372411-2372597:1:exon
so has part: feature:2389031-2389253:1:exon
so has part: feature:2393324-2393438:1:exon
so has part: feature:2395473-2395814:1:exon

position:2344651:1
position: 2344651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2344651-2344732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2372411-2372597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2389031-2389253:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2393324-2393438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2395473-2395814:1:exon

VGLL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 4 isoform X1
translation: MLFMRMDLLNYQYLDKMNNNIGILCYEGEAALRGEPRMQPLQSPALSNHRTGPPPISPSKRKLSMDQGDEELDCESDHVSKMSRMFNPHLSKPANGDYRKEHRERSRSPIERAAAPTMSLHANHMYASIPSLSMEQPLALTKNSVDAARTVGISPSLSSVERQQNRPSVITCASANNRNCNLSHCPIAHSACSGAAYRRPSSSSAACDPVVEEHFRRSLGKNYKEPEPAANSVSITGSVDDHFAKALGDTWLQLKAAKDGAGGSPEAAARRGRGSPSSSHLLSHSHSPSVLS
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2344651..2344732,2372411..2372597,2389031..2389253,2393324..2393438,2395473..2395744)
location: region:2344651-2395744:1
so has part: feature:2344651-2344732:1:exon
so has part: feature:2372411-2372597:1:exon
so has part: feature:2389031-2389253:1:exon
so has part: feature:2393324-2393438:1:exon
so has part: feature:2395473-2395744:1:exon

XP_005052873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2344651-2344732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2372411-2372597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2389031-2389253:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2393324-2393438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2395473-2395744:1:exon

VGLL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: VGLL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 4 isoform X2
translation: MLFMRMDLLNYQYLDKMNNNIGILCYEGEAALRGEPRMQPLQSPALSNHRTGPPPISPSKRKLSMDQGDEELDCESDHVSKMSRMFNPHLKPANGDYRKEHRERSRSPIERAAAPTMSLHANHMYASIPSLSMEQPLALTKNSVDAARTVGISPSLSSVERQQNRPSVITCASANNRNCNLSHCPIAHSACSGAAYRRPSSSSAACDPVVEEHFRRSLGKNYKEPEPAANSVSITGSVDDHFAKALGDTWLQLKAAKDGAGGSPEAAARRGRGSPSSSHLLSHSHSPSVLS
SIO_010081: VGLL4
subclass of: SO_0000673
so part of: VGLL4
location: join(2344651..2344732,2372411..2372597,2389034..2389253,2393324..2393438,2395473..2395744)
location: region:2344651-2395744:1
so has part: feature:2344651-2344732:1:exon
so has part: feature:2372411-2372597:1:exon
so has part: feature:2389034-2389253:1:exon
so has part: feature:2393324-2393438:1:exon
so has part: feature:2395473-2395744:1:exon

XP_005052874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2344651-2344732:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2372411-2372597:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2389034-2389253:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2393324-2393438:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2395473-2395744:1:exon

ATG7
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ATG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2414836..2490348)
location: region:2414836-2490348:-1
so has part: feature:2414836-2490348:-1:exon
subclass of: SO_0000010

101814423
type: Gene
SIO_000068: ncbigene

position:2414836:-1
position: 2414836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2490348:-1
position: 2490348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2414836-2490348:-1:exon

ATG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ATG7
product: autophagy related 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052815.2
SIO_010081: ATG7
subclass of: SO_0000673
so part of: ATG7
location: complement(join(2414836..2416285,2458629..2458751,2470736..2470816,2471906..2471981,2472666..2472781,2473027..2473230,2476670..2476864,2479207..2479365,2479937..2480081,2481302..2481392,2482448..2482569,2483579..2483667,2484150..2484299,2484839..2484955,2485427..2485504,2486317..2486434,2487419..2487473,2487741..2487941,2490311..2490348))
location: region:2414836-2490348:-1
so has part: feature:2490311-2490348:-1:exon
so has part: feature:2487741-2487941:-1:exon
so has part: feature:2487419-2487473:-1:exon
so has part: feature:2486317-2486434:-1:exon
so has part: feature:2485427-2485504:-1:exon
so has part: feature:2484839-2484955:-1:exon
so has part: feature:2484150-2484299:-1:exon
so has part: feature:2483579-2483667:-1:exon
so has part: feature:2482448-2482569:-1:exon
so has part: feature:2481302-2481392:-1:exon
so has part: feature:2479937-2480081:-1:exon
so has part: feature:2479207-2479365:-1:exon
so has part: feature:2476670-2476864:-1:exon
so has part: feature:2473027-2473230:-1:exon
so has part: feature:2472666-2472781:-1:exon
so has part: feature:2471906-2471981:-1:exon
so has part: feature:2470736-2470816:-1:exon
so has part: feature:2458629-2458751:-1:exon
so has part: feature:2414836-2416285:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2490311-2490348:-1:exon

position:2490311:-1
position: 2490311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2487741-2487941:-1:exon

position:2487741:-1
position: 2487741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487941:-1
position: 2487941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2487419-2487473:-1:exon

position:2487419:-1
position: 2487419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487473:-1
position: 2487473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2486317-2486434:-1:exon

position:2486317:-1
position: 2486317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2486434:-1
position: 2486434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2485427-2485504:-1:exon

position:2485427:-1
position: 2485427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2485504:-1
position: 2485504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2484839-2484955:-1:exon

position:2484839:-1
position: 2484839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2484955:-1
position: 2484955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2484150-2484299:-1:exon

position:2484150:-1
position: 2484150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2484299:-1
position: 2484299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2483579-2483667:-1:exon

position:2483579:-1
position: 2483579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2483667:-1
position: 2483667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2482448-2482569:-1:exon

position:2482448:-1
position: 2482448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2482569:-1
position: 2482569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2481302-2481392:-1:exon

position:2481302:-1
position: 2481302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2481392:-1
position: 2481392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2479937-2480081:-1:exon

position:2479937:-1
position: 2479937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480081:-1
position: 2480081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2479207-2479365:-1:exon

position:2479207:-1
position: 2479207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2479365:-1
position: 2479365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2476670-2476864:-1:exon

position:2476670:-1
position: 2476670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2476864:-1
position: 2476864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2473027-2473230:-1:exon

position:2473027:-1
position: 2473027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2473230:-1
position: 2473230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2472666-2472781:-1:exon

position:2472666:-1
position: 2472666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2472781:-1
position: 2472781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2471906-2471981:-1:exon

position:2471906:-1
position: 2471906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2471981:-1
position: 2471981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2470736-2470816:-1:exon

position:2470736:-1
position: 2470736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2470816:-1
position: 2470816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2458629-2458751:-1:exon

position:2458629:-1
position: 2458629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2458751:-1
position: 2458751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2414836-2416285:-1:exon

position:2416285:-1
position: 2416285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ATG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-like modifier-activating enzyme ATG7
translation: MAAAGGDPGRAALSALQFAPFSSALDAGFWHELTQRKLNQYRLDETPKAIKGYYYNGDPLGLPARLTLEFSAFDMNASIPARCCPAFGTLYNTNTFETFKSCDKKALLDKEANEIWESIKSGAALENPMLLNRFLLLTFADLKKYHFYYWFCYPALCFPDGIHITQKPVCLGDRFSLNQIEALQKAYDDLCQEEGVTALPYFLIKYHDNSVIISLLKRWDGFFQDQGEKVTVGVYDPCNLSQYPGWPLRNFLILAAHKWGSVLQRVEVLCFRDRTMQGVRDISHSIIFEIKLPETPLGPDCPKAVGWEKNQKGGMGPRMVNLSECMDPKRLAESSVDLNLKLMCWRLVPTLDLEKIVAAKCLLLGAGTLGCSVARTLMGWGVRKITFVDNAKISYSNPVRQPLYEFEDCLSGGKPKALAAADRLQKIFPGVSSEGYNMSIPMPGHPVNFSEVTMAQAQKDVAKLEELIDAHDVVFLLMDTRESRWLPAVIAASKRKLVINAALGFDTFVVMRHGLKKPKQQESGDSHFSSASASSDLLGSSLFSNIPGYKLGCYFCNDVVAPGDSTRDRTLDQQCTVSRPGLAMVAGALAVELMVSVLQHPEGGYAVASSSDDRMNEPPTSLGLVPHQIRGFLSRFDNVLPVSLAFDKCTACSAKVLDQYEREGFNFLAKVFNSSHSFLEDLTGLTLLHQETQAAEIWDMSDDETV
SIO_010081: ATG7
subclass of: SO_0000673
so part of: ATG7
location: complement(join(2416253..2416285,2458629..2458751,2470736..2470816,2471906..2471981,2472666..2472781,2473027..2473230,2476670..2476864,2479207..2479365,2479937..2480081,2481302..2481392,2482448..2482569,2483579..2483667,2484150..2484299,2484839..2484955,2485427..2485504,2486317..2486434,2487419..2487473,2487741..2487909))
location: region:2416253-2487909:-1
so has part: feature:2487741-2487909:-1:exon
so has part: feature:2487419-2487473:-1:exon
so has part: feature:2486317-2486434:-1:exon
so has part: feature:2485427-2485504:-1:exon
so has part: feature:2484839-2484955:-1:exon
so has part: feature:2484150-2484299:-1:exon
so has part: feature:2483579-2483667:-1:exon
so has part: feature:2482448-2482569:-1:exon
so has part: feature:2481302-2481392:-1:exon
so has part: feature:2479937-2480081:-1:exon
so has part: feature:2479207-2479365:-1:exon
so has part: feature:2476670-2476864:-1:exon
so has part: feature:2473027-2473230:-1:exon
so has part: feature:2472666-2472781:-1:exon
so has part: feature:2471906-2471981:-1:exon
so has part: feature:2470736-2470816:-1:exon
so has part: feature:2458629-2458751:-1:exon
so has part: feature:2416253-2416285:-1:exon

XP_005052872.1
type: Protein
SIO_000068: ncbiprotein

position:2416253:-1
position: 2416253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487909:-1
position: 2487909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2487741-2487909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2487419-2487473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2486317-2486434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2485427-2485504:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2484839-2484955:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2484150-2484299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2483579-2483667:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2482448-2482569:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2481302-2481392:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2479937-2480081:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2479207-2479365:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2476670-2476864:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2473027-2473230:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2472666-2472781:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2471906-2471981:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2470736-2470816:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2458629-2458751:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2416253-2416285:-1:exon

HRH1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2492289..2501088)
location: region:2492289-2501088:-1
so has part: feature:2492289-2501088:-1:exon
subclass of: SO_0000010

101814104
type: Gene
SIO_000068: ncbigene

position:2492289:-1
position: 2492289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501088:-1
position: 2501088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2492289-2501088:-1:exon

HRH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HRH1
product: histamine receptor H1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052812.1
SIO_010081: HRH1
subclass of: SO_0000673
so part of: HRH1
location: complement(join(2492289..2495053,2501067..2501088))
location: region:2492289-2501088:-1
so has part: feature:2501067-2501088:-1:exon
so has part: feature:2492289-2495053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2501067-2501088:-1:exon

position:2501067:-1
position: 2501067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2492289-2495053:-1:exon

position:2495053:-1
position: 2495053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HRH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HRH1
product: histamine receptor H1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052811.1
SIO_010081: HRH1
subclass of: SO_0000673
so part of: HRH1
location: complement(join(2492289..2495053,2496075..2496230,2501067..2501088))
location: region:2492289-2501088:-1
so has part: feature:2501067-2501088:-1:exon
so has part: feature:2496075-2496230:-1:exon
so has part: feature:2492289-2495053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2501067-2501088:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2496075-2496230:-1:exon

position:2496075:-1
position: 2496075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2496230:-1
position: 2496230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2492289-2495053:-1:exon

HRH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H1 receptor
translation: MSNNTTENSSNAPSALLGLFLGSISLITIVMNILVLCAVKTEKKLQTVGNLYIVSLSIADLIVGAAVMPLHIVDLLSPRWPLGLAACLFWLSMDYVASTASIFNLFVLCMDRYRSVQQPLKYLKYRTKMRASLLILGVWLLSFTWVIPILGWHVFANSGKRNVAGDKCETEFFQVTWFKVLTAIFNFYLPSLLMLWFYCKIFRTVRKHCQHRELTDGSYWSAMEKNVHQTKTKDEKNICLQKQILGENSPGTDKQAEPQRMEAELHFSHPDKAPKALSNGKVPKWSCLSLSTAKPEPGSDKAGKKGACATRKAGDKEQPDSQDSDSSVASDTHTFTEVTPRAEQPSPSPSPTGACCPQARTERRDSRALGLLRKTWHTLHSHSRSIHQHRNREKKAAKQLGVIMAAFMLCWIPYFVLFMVVTFQDHQQLSELHRVTIWLGYINSTLNPFLYPLCNHNFKKTFKKILHIH
SIO_010081: HRH1
subclass of: SO_0000673
so part of: HRH1
location: complement(2493528..2494937)
location: region:2493528-2494937:-1
so has part: feature:2493528-2494937:-1:exon

XP_005052868.1
type: Protein
SIO_000068: ncbiprotein

position:2493528:-1
position: 2493528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494937:-1
position: 2494937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2493528-2494937:-1:exon

HRH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HRH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histamine H1 receptor
translation: MSNNTTENSSNAPSALLGLFLGSISLITIVMNILVLCAVKTEKKLQTVGNLYIVSLSIADLIVGAAVMPLHIVDLLSPRWPLGLAACLFWLSMDYVASTASIFNLFVLCMDRYRSVQQPLKYLKYRTKMRASLLILGVWLLSFTWVIPILGWHVFANSGKRNVAGDKCETEFFQVTWFKVLTAIFNFYLPSLLMLWFYCKIFRTVRKHCQHRELTDGSYWSAMEKNVHQTKTKDEKNICLQKQILGENSPGTDKQAEPQRMEAELHFSHPDKAPKALSNGKVPKWSCLSLSTAKPEPGSDKAGKKGACATRKAGDKEQPDSQDSDSSVASDTHTFTEVTPRAEQPSPSPSPTGACCPQARTERRDSRALGLLRKTWHTLHSHSRSIHQHRNREKKAAKQLGVIMAAFMLCWIPYFVLFMVVTFQDHQQLSELHRVTIWLGYINSTLNPFLYPLCNHNFKKTFKKILHIH
SIO_010081: HRH1
subclass of: SO_0000673
so part of: HRH1
location: complement(2493528..2494937)
location: region:2493528-2494937:-1
so has part: feature:2493528-2494937:-1:exon

XP_005052869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2493528-2494937:-1:exon

SLC6A1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SLC6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2586373..2607393)
location: region:2586373-2607393:-1
so has part: feature:2586373-2607393:-1:exon
subclass of: SO_0000010

101813906
type: Gene
SIO_000068: ncbigene

position:2586373:-1
position: 2586373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2607393:-1
position: 2607393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2586373-2607393:-1:exon

SLC6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SLC6A1
product: solute carrier family 6 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 58 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005052810.1
SIO_010081: SLC6A1
subclass of: SO_0000673
so part of: SLC6A1
location: complement(join(2586373..2586579,2588092..2588259,2589651..2589751,2590963..2591065,2592209..2592340,2596243..2596355,2599731..2599855,2600537..2600640,2600758..2600892,2602332..2602464,2602583..2602692,2604079..2604179,2604983..2605114,2606967..2607297,2607341..2607393))
location: region:2586373-2607393:-1
so has part: feature:2607341-2607393:-1:exon
so has part: feature:2606967-2607297:-1:exon
so has part: feature:2604983-2605114:-1:exon
so has part: feature:2604079-2604179:-1:exon
so has part: feature:2602583-2602692:-1:exon
so has part: feature:2602332-2602464:-1:exon
so has part: feature:2600758-2600892:-1:exon
so has part: feature:2600537-2600640:-1:exon
so has part: feature:2599731-2599855:-1:exon
so has part: feature:2596243-2596355:-1:exon
so has part: feature:2592209-2592340:-1:exon
so has part: feature:2590963-2591065:-1:exon
so has part: feature:2589651-2589751:-1:exon
so has part: feature:2588092-2588259:-1:exon
so has part: feature:2586373-2586579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2607341-2607393:-1:exon

position:2607341:-1
position: 2607341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2606967-2607297:-1:exon

position:2606967:-1
position: 2606967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2607297:-1
position: 2607297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2604983-2605114:-1:exon

position:2604983:-1
position: 2604983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2605114:-1
position: 2605114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2604079-2604179:-1:exon

position:2604079:-1
position: 2604079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2604179:-1
position: 2604179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2602583-2602692:-1:exon

position:2602583:-1
position: 2602583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2602692:-1
position: 2602692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2602332-2602464:-1:exon

position:2602332:-1
position: 2602332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2602464:-1
position: 2602464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2600758-2600892:-1:exon

position:2600758:-1
position: 2600758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600892:-1
position: 2600892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2600537-2600640:-1:exon

position:2600537:-1
position: 2600537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2600640:-1
position: 2600640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2599731-2599855:-1:exon

position:2599731:-1
position: 2599731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2599855:-1
position: 2599855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2596243-2596355:-1:exon

position:2596243:-1
position: 2596243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2596355:-1
position: 2596355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2592209-2592340:-1:exon

position:2592209:-1
position: 2592209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2592340:-1
position: 2592340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2590963-2591065:-1:exon

position:2590963:-1
position: 2590963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2591065:-1
position: 2591065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2589651-2589751:-1:exon

position:2589651:-1
position: 2589651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2589751:-1
position: 2589751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2588092-2588259:-1:exon

position:2588092:-1
position: 2588092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2588259:-1
position: 2588259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2586373-2586579:-1:exon

position:2586579:-1
position: 2586579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SLC6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium- and chloride-dependent GABA transporter 1
translation: MATNGTKVADGQISTEVDASITNDKPKTLVVKVQKKKTDLPDRDTWKGKFDFLMSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKHCENPWNTERCFSNYTLANTTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVYFSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGLGSLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRNRRELFIAVVCIVSYVIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRFYDNIQEMVGYRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQGVGWFMALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDITHPENGPDQAQQSNSANKEAYI
SIO_010081: SLC6A1
subclass of: SO_0000673
so part of: SLC6A1
location: complement(join(2586475..2586579,2588092..2588259,2589651..2589751,2590963..2591065,2592209..2592340,2596243..2596355,2599731..2599855,2600537..2600640,2600758..2600892,2602332..2602464,2602583..2602692,2604079..2604179,2604983..2605114,2606967..2607201))
location: region:2586475-2607201:-1
so has part: feature:2606967-2607201:-1:exon
so has part: feature:2604983-2605114:-1:exon
so has part: feature:2604079-2604179:-1:exon
so has part: feature:2602583-2602692:-1:exon
so has part: feature:2602332-2602464:-1:exon
so has part: feature:2600758-2600892:-1:exon
so has part: feature:2600537-2600640:-1:exon
so has part: feature:2599731-2599855:-1:exon
so has part: feature:2596243-2596355:-1:exon
so has part: feature:2592209-2592340:-1:exon
so has part: feature:2590963-2591065:-1:exon
so has part: feature:2589651-2589751:-1:exon
so has part: feature:2588092-2588259:-1:exon
so has part: feature:2586475-2586579:-1:exon

XP_005052867.1
type: Protein
SIO_000068: ncbiprotein

position:2586475:-1
position: 2586475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2607201:-1
position: 2607201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2606967-2607201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2604983-2605114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2604079-2604179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2602583-2602692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2602332-2602464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2600758-2600892:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2600537-2600640:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2599731-2599855:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2596243-2596355:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2592209-2592340:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2590963-2591065:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2589651-2589751:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2588092-2588259:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2586475-2586579:-1:exon

LOC101813697
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101813697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2746221..2761122)
location: region:2746221-2761122:-1
so has part: feature:2746221-2761122:-1:exon
subclass of: SO_0000010

101813697
type: Gene
SIO_000068: ncbigene

position:2746221:-1
position: 2746221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2761122:-1
position: 2761122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2746221-2761122:-1:exon

LOC101813697
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101813697
product: sodium- and chloride-dependent GABA transporter 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016301384.1
SIO_010081: LOC101813697
subclass of: SO_0000673
so part of: LOC101813697
location: complement(join(2746221..2746387,2747733..2747903,2749208..2749308,2750017..2750119,2751706..2751843,2753583..2753695,2756043..2756167,2761003..2761122))
location: region:2746221-2761122:-1
so has part: feature:2761003-2761122:-1:exon
so has part: feature:2756043-2756167:-1:exon
so has part: feature:2753583-2753695:-1:exon
so has part: feature:2751706-2751843:-1:exon
so has part: feature:2750017-2750119:-1:exon
so has part: feature:2749208-2749308:-1:exon
so has part: feature:2747733-2747903:-1:exon
so has part: feature:2746221-2746387:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2761003-2761122:-1:exon

position:2761003:-1
position: 2761003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2756043-2756167:-1:exon

position:2756043:-1
position: 2756043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756167:-1
position: 2756167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2753583-2753695:-1:exon

position:2753583:-1
position: 2753583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2753695:-1
position: 2753695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2751706-2751843:-1:exon

position:2751706:-1
position: 2751706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2751843:-1
position: 2751843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2750017-2750119:-1:exon

position:2750017:-1
position: 2750017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2750119:-1
position: 2750119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2749208-2749308:-1:exon

position:2749208:-1
position: 2749208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2749308:-1
position: 2749308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2747733-2747903:-1:exon

position:2747733:-1
position: 2747733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2747903:-1
position: 2747903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2746221-2746387:-1:exon

position:2746387:-1
position: 2746387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101813697
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101813697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium- and chloride-dependent GABA transporter 3
translation: MLCCLNSGTSFVAGFAIFSVLGFMAYEQGVPIAEVAESGPGLAFIAYPKAVTMMPLSPLWAALFFMMLIFLGLDSQFVCVESIVTAVVDMYPKVFRRGYRRELLILGLSIVSYFLGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFECVCIGWVYGSNRFYENIEDMIGYKPVSLIKWCWMVLTPGICAGIFIFFLVKYKPLKYNNVYIYPDWGYGIGWMMALSSMVCIPLWICIKLWKTEGTFMEKFRKLITPSSDLKMRGKLGGGAYIAAINDCDAKLKGDGTISTITEKETHF
SIO_010081: LOC101813697
subclass of: SO_0000673
so part of: LOC101813697
location: complement(join(2746235..2746387,2747733..2747903,2749208..2749308,2750017..2750119,2751706..2751843,2753583..2753695,2756043..2756157))
location: region:2746235-2756157:-1
so has part: feature:2756043-2756157:-1:exon
so has part: feature:2753583-2753695:-1:exon
so has part: feature:2751706-2751843:-1:exon
so has part: feature:2750017-2750119:-1:exon
so has part: feature:2749208-2749308:-1:exon
so has part: feature:2747733-2747903:-1:exon
so has part: feature:2746235-2746387:-1:exon

XP_016156870.1
type: Protein
SIO_000068: ncbiprotein

position:2746235:-1
position: 2746235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2756157:-1
position: 2756157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2756043-2756157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2753583-2753695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2751706-2751843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2750017-2750119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2749208-2749308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2747733-2747903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2746235-2746387:-1:exon

LOC107603922
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2832097..2841038)
location: region:2832097-2841038:-1
so has part: feature:2832097-2841038:-1:exon
subclass of: SO_0000010

107603922
type: Gene
SIO_000068: ncbigene

position:2832097:-1
position: 2832097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2841038:-1
position: 2841038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2832097-2841038:-1:exon

LOC107603922
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107603922
product: sodium- and chloride-dependent GABA transporter 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_016301385.1
SIO_010081: LOC107603922
subclass of: SO_0000673
so part of: LOC107603922
location: complement(join(2832097..2832191,2833687..2833827,2833997..2834131,2836876..2837106,2840591..2841038))
location: region:2832097-2841038:-1
so has part: feature:2840591-2841038:-1:exon
so has part: feature:2836876-2837106:-1:exon
so has part: feature:2833997-2834131:-1:exon
so has part: feature:2833687-2833827:-1:exon
so has part: feature:2832097-2832191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2840591-2841038:-1:exon

position:2840591:-1
position: 2840591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2836876-2837106:-1:exon

position:2836876:-1
position: 2836876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2837106:-1
position: 2837106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2833997-2834131:-1:exon

position:2833997:-1
position: 2833997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2834131:-1
position: 2834131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2833687-2833827:-1:exon

position:2833687:-1
position: 2833687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2833827:-1
position: 2833827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2832097-2832191:-1:exon

position:2832191:-1
position: 2832191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107603922
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107603922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium- and chloride-dependent GABA transporter 3-like
translation: MTAEKTIPIINGKPEDALDPEASSTNLVHSNDKKVHERGHWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLFNCFTTELPWASCGHEWNTENCVEFQKLNMSNCSQVSLQNATSPVMEFWE
SIO_010081: LOC107603922
subclass of: SO_0000673
so part of: LOC107603922
location: complement(join(2832097..2832191,2833687..2833827,2833997..2834131,2836876..2837095))
location: region:2832097-2837095:-1
so has part: feature:2836876-2837095:-1:exon
so has part: feature:2833997-2834131:-1:exon
so has part: feature:2833687-2833827:-1:exon
so has part: feature:2832097-2832191:-1:exon

XP_016156871.1
type: Protein
SIO_000068: ncbiprotein

position:2837095:-1
position: 2837095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2836876-2837095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2833997-2834131:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2833687-2833827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2832097-2832191:-1:exon

ATP2B2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ATP2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2900841..3151646)
location: region:2900841-3151646:-1
so has part: feature:2900841-3151646:-1:exon
subclass of: SO_0000010

101819826
type: Gene
SIO_000068: ncbigene

position:2900841:-1
position: 2900841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3151646:-1
position: 3151646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2900841-3151646:-1:exon

ATP2B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ATP2B2
product: ATPase plasma membrane Ca2+ transporting 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301342.1
SIO_010081: ATP2B2
subclass of: SO_0000673
so part of: ATP2B2
location: complement(join(2900841..2901692,2920003..2920185,2923762..2923869,2925772..2925983,2928624..2928837,2939050..2939241,2940740..2940846,2947283..2947370,2948333..2948512,2954802..2955036,2955972..2956213,2977217..2977459,2978617..2978831,2993163..2993327,2994918..2994959,3004221..3004346,3004994..3005119,3006057..3006314,3030984..3031181,3087548..3088046,3151214..3151646))
location: region:2900841-3151646:-1
so has part: feature:3151214-3151646:-1:exon
so has part: feature:3087548-3088046:-1:exon
so has part: feature:3030984-3031181:-1:exon
so has part: feature:3006057-3006314:-1:exon
so has part: feature:3004994-3005119:-1:exon
so has part: feature:3004221-3004346:-1:exon
so has part: feature:2994918-2994959:-1:exon
so has part: feature:2993163-2993327:-1:exon
so has part: feature:2978617-2978831:-1:exon
so has part: feature:2977217-2977459:-1:exon
so has part: feature:2955972-2956213:-1:exon
so has part: feature:2954802-2955036:-1:exon
so has part: feature:2948333-2948512:-1:exon
so has part: feature:2947283-2947370:-1:exon
so has part: feature:2940740-2940846:-1:exon
so has part: feature:2939050-2939241:-1:exon
so has part: feature:2928624-2928837:-1:exon
so has part: feature:2925772-2925983:-1:exon
so has part: feature:2923762-2923869:-1:exon
so has part: feature:2920003-2920185:-1:exon
so has part: feature:2900841-2901692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3151214-3151646:-1:exon

position:3151214:-1
position: 3151214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3087548-3088046:-1:exon

position:3087548:-1
position: 3087548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3088046:-1
position: 3088046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3030984-3031181:-1:exon

position:3030984:-1
position: 3030984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3031181:-1
position: 3031181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3006057-3006314:-1:exon

position:3006057:-1
position: 3006057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006314:-1
position: 3006314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3004994-3005119:-1:exon

position:3004994:-1
position: 3004994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3005119:-1
position: 3005119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3004221-3004346:-1:exon

position:3004221:-1
position: 3004221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3004346:-1
position: 3004346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2994918-2994959:-1:exon

position:2994918:-1
position: 2994918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2994959:-1
position: 2994959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2993163-2993327:-1:exon

position:2993163:-1
position: 2993163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993327:-1
position: 2993327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2978617-2978831:-1:exon

position:2978617:-1
position: 2978617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2978831:-1
position: 2978831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2977217-2977459:-1:exon

position:2977217:-1
position: 2977217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2977459:-1
position: 2977459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2955972-2956213:-1:exon

position:2955972:-1
position: 2955972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2956213:-1
position: 2956213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2954802-2955036:-1:exon

position:2954802:-1
position: 2954802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2955036:-1
position: 2955036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2948333-2948512:-1:exon

position:2948333:-1
position: 2948333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2948512:-1
position: 2948512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2947283-2947370:-1:exon

position:2947283:-1
position: 2947283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2947370:-1
position: 2947370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2940740-2940846:-1:exon

position:2940740:-1
position: 2940740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2940846:-1
position: 2940846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2939050-2939241:-1:exon

position:2939050:-1
position: 2939050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2939241:-1
position: 2939241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2928624-2928837:-1:exon

position:2928624:-1
position: 2928624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2928837:-1
position: 2928837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2925772-2925983:-1:exon

position:2925772:-1
position: 2925772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2925983:-1
position: 2925983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2923762-2923869:-1:exon

position:2923762:-1
position: 2923762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2923869:-1
position: 2923869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2920003-2920185:-1:exon

position:2920003:-1
position: 2920003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2920185:-1
position: 2920185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2900841-2901692:-1:exon

position:2901692:-1
position: 2901692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP2B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ATP2B2
product: ATPase plasma membrane Ca2+ transporting 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052845.2
SIO_010081: ATP2B2
subclass of: SO_0000673
so part of: ATP2B2
location: complement(join(2900841..2901692,2920003..2920185,2923762..2923869,2925772..2925983,2928624..2928837,2939050..2939241,2940740..2940846,2947283..2947370,2948333..2948512,2954802..2955036,2955972..2956213,2977217..2977459,2978617..2978831,2980036..2980197,2994918..2994933,3004201..3004346,3004994..3005119,3006057..3006314,3030984..3031181,3087548..3088046))
location: region:2900841-3088046:-1
so has part: feature:3087548-3088046:-1:exon
so has part: feature:3030984-3031181:-1:exon
so has part: feature:3006057-3006314:-1:exon
so has part: feature:3004994-3005119:-1:exon
so has part: feature:3004201-3004346:-1:exon
so has part: feature:2994918-2994933:-1:exon
so has part: feature:2980036-2980197:-1:exon
so has part: feature:2978617-2978831:-1:exon
so has part: feature:2977217-2977459:-1:exon
so has part: feature:2955972-2956213:-1:exon
so has part: feature:2954802-2955036:-1:exon
so has part: feature:2948333-2948512:-1:exon
so has part: feature:2947283-2947370:-1:exon
so has part: feature:2940740-2940846:-1:exon
so has part: feature:2939050-2939241:-1:exon
so has part: feature:2928624-2928837:-1:exon
so has part: feature:2925772-2925983:-1:exon
so has part: feature:2923762-2923869:-1:exon
so has part: feature:2920003-2920185:-1:exon
so has part: feature:2900841-2901692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3087548-3088046:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3030984-3031181:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006057-3006314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3004994-3005119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004201-3004346:-1:exon

position:3004201:-1
position: 3004201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2994918-2994933:-1:exon

position:2994933:-1
position: 2994933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2980036-2980197:-1:exon

position:2980036:-1
position: 2980036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2980197:-1
position: 2980197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2978617-2978831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2977217-2977459:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2955972-2956213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2954802-2955036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2948333-2948512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2947283-2947370:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2940740-2940846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2939050-2939241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2928624-2928837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2925772-2925983:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2923762-2923869:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2920003-2920185:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2900841-2901692:-1:exon

ATP2B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ATP2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 2 isoform X1
translation: MGDMTNSDFYSKNQRNEANHAGEFGCTLQELRSLMELRGTEAVVKIKETYGETEGLCRHLKTSPTEGLAGTAADLEKRKLIFGKNFIPPKKPKTFIQLVWEALQDVTLIILEIAAIISLGLSFYQPPGEGNEGCGTATGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRGGQVIQIPVAEIVVGDIAQVKYGDLLPADGIFIQGNDLKIDESSLTGESDQVRKSVDKDPMLLSGTHVMEGSGRMLVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKGKMQDGNMENNQNKAKQQDGAAAMEMQPLKSAEGGEGDDKDKKKSNMHKKEKSVLQGKLTKLAVQIGKAGLIMSAITVIILVLYFVIDTFGMQGRPWLAECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQAYVGDVHYKEIPEPDSIPAKTMELLVNAIAINSAYTTKILPPEKEGGLPRQVGNKTECGLLGFVLDLKQDYEPVRSLIPEEKLYKVYTFNSVRKSMSTVIKLPDGSFRMYSKGASEIVLKKCSRILNAAGEPRIFRPRDRDEMVKKVIEPMACDGLRTICVAFRDFPSSPEPDWDNENDILSDLTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTQVEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNIVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPSESLLLRKPYGRNKPLISRTMMKNILGHAVYQLTLIFTLLFVGEKMFKIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCVFIGLGELVWGQVIATIPTSRLKFLKEAGRLTEKEEVPEEELNEDVEEIDHAERELRRGQILWFRGLNRIQTQIRVVKAFRSSLYEGLEKPESRTSIHNFMTHPEFRIEDSQPHIPLIDDTDLEEDPALKKNSSPPSSLNKNNSAIDSGINLTTDTSKSATSSSPGSPIHSLETSL
SIO_010081: ATP2B2
subclass of: SO_0000673
so part of: ATP2B2
location: complement(join(2901381..2901692,2920003..2920185,2923762..2923869,2925772..2925983,2928624..2928837,2939050..2939241,2940740..2940846,2947283..2947370,2948333..2948512,2954802..2955036,2955972..2956213,2977217..2977459,2978617..2978831,2993163..2993327,2994918..2994959,3004221..3004346,3004994..3005119,3006057..3006314,3030984..3031181,3087548..3087746))
location: region:2901381-3087746:-1
so has part: feature:3087548-3087746:-1:exon
so has part: feature:3030984-3031181:-1:exon
so has part: feature:3006057-3006314:-1:exon
so has part: feature:3004994-3005119:-1:exon
so has part: feature:3004221-3004346:-1:exon
so has part: feature:2994918-2994959:-1:exon
so has part: feature:2993163-2993327:-1:exon
so has part: feature:2978617-2978831:-1:exon
so has part: feature:2977217-2977459:-1:exon
so has part: feature:2955972-2956213:-1:exon
so has part: feature:2954802-2955036:-1:exon
so has part: feature:2948333-2948512:-1:exon
so has part: feature:2947283-2947370:-1:exon
so has part: feature:2940740-2940846:-1:exon
so has part: feature:2939050-2939241:-1:exon
so has part: feature:2928624-2928837:-1:exon
so has part: feature:2925772-2925983:-1:exon
so has part: feature:2923762-2923869:-1:exon
so has part: feature:2920003-2920185:-1:exon
so has part: feature:2901381-2901692:-1:exon

XP_016156828.1
type: Protein
SIO_000068: ncbiprotein

position:2901381:-1
position: 2901381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3087746:-1
position: 3087746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3087548-3087746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3030984-3031181:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006057-3006314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3004994-3005119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004221-3004346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2994918-2994959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2993163-2993327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2978617-2978831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2977217-2977459:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2955972-2956213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2954802-2955036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2948333-2948512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2947283-2947370:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2940740-2940846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2939050-2939241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2928624-2928837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2925772-2925983:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2923762-2923869:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2920003-2920185:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2901381-2901692:-1:exon

ATP2B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ATP2B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 2 isoform X2
translation: MGDMTNSDFYSKNQRNEANHAGEFGCTLQELRSLMELRGTEAVVKIKETYGETEGLCRHLKTSPTEGLAGTAADLEKRKLIFGKNFIPPKKPKTFIQLVWEALQDVTLIILEIAAIISLGLSFYQPPGEGNEGCGTATGGAEDEGEAEAGWIEGAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVVRGGQVIQIPVAEIVVGDIAQVKYGDLLPADGIFIQGNDLKIDESSLTGESDQVRKSVDKDPMLLSGTHVMEGSGRMLVTAVGVNSQTGIIFTLLGAGGEEEEKKDKKGKSPSTRNNQNKAKTQDGVALEIQPLKSQEGVENEEKEKKKVKVPKKEKSVLQGKLTRLAVQIGKAGLIMSAITVIILVLYFVIDTFGMQGRPWLAECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQAYVGDVHYKEIPEPDSIPAKTMELLVNAIAINSAYTTKILPPEKEGGLPRQVGNKTECGLLGFVLDLKQDYEPVRSLIPEEKLYKVYTFNSVRKSMSTVIKLPDGSFRMYSKGASEIVLKKCSRILNAAGEPRIFRPRDRDEMVKKVIEPMACDGLRTICVAFRDFPSSPEPDWDNENDILSDLTCICVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGIIHPGEDFLCLEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTQVEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNIVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPSESLLLRKPYGRNKPLISRTMMKNILGHAVYQLTLIFTLLFVGEKMFKIDSGRNAPLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWCVFIGLGELVWGQVIATIPTSRLKFLKEAGRLTEKEEVPEEELNEDVEEIDHAERELRRGQILWFRGLNRIQTQIRVVKAFRSSLYEGLEKPESRTSIHNFMTHPEFRIEDSQPHIPLIDDTDLEEDPALKKNSSPPSSLNKNNSAIDSGINLTTDTSKSATSSSPGSPIHSLETSL
SIO_010081: ATP2B2
subclass of: SO_0000673
so part of: ATP2B2
location: complement(join(2901381..2901692,2920003..2920185,2923762..2923869,2925772..2925983,2928624..2928837,2939050..2939241,2940740..2940846,2947283..2947370,2948333..2948512,2954802..2955036,2955972..2956213,2977217..2977459,2978617..2978831,2980036..2980197,2994918..2994933,3004201..3004346,3004994..3005119,3006057..3006314,3030984..3031181,3087548..3087746))
location: region:2901381-3087746:-1
so has part: feature:3087548-3087746:-1:exon
so has part: feature:3030984-3031181:-1:exon
so has part: feature:3006057-3006314:-1:exon
so has part: feature:3004994-3005119:-1:exon
so has part: feature:3004201-3004346:-1:exon
so has part: feature:2994918-2994933:-1:exon
so has part: feature:2980036-2980197:-1:exon
so has part: feature:2978617-2978831:-1:exon
so has part: feature:2977217-2977459:-1:exon
so has part: feature:2955972-2956213:-1:exon
so has part: feature:2954802-2955036:-1:exon
so has part: feature:2948333-2948512:-1:exon
so has part: feature:2947283-2947370:-1:exon
so has part: feature:2940740-2940846:-1:exon
so has part: feature:2939050-2939241:-1:exon
so has part: feature:2928624-2928837:-1:exon
so has part: feature:2925772-2925983:-1:exon
so has part: feature:2923762-2923869:-1:exon
so has part: feature:2920003-2920185:-1:exon
so has part: feature:2901381-2901692:-1:exon

XP_005052902.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3087548-3087746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3030984-3031181:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006057-3006314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3004994-3005119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3004201-3004346:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2994918-2994933:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2980036-2980197:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2978617-2978831:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2977217-2977459:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2955972-2956213:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2954802-2955036:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2948333-2948512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2947283-2947370:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2940740-2940846:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2939050-2939241:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2928624-2928837:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2925772-2925983:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2923762-2923869:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2920003-2920185:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2901381-2901692:-1:exon

LOC107603913
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2903604..2904439)
location: region:2903604-2904439:-1
so has part: feature:2903604-2904439:-1:exon
subclass of: SO_0000011

107603913
type: Gene
SIO_000068: ncbigene

position:2903604:-1
position: 2903604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904439:-1
position: 2904439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2903604-2904439:-1:exon

LOC107603913
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107603913
product: uncharacterized LOC107603913
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001611729.1
SIO_010081: LOC107603913
subclass of: SO_0000673
so part of: LOC107603913
location: complement(join(2903604..2904220,2904307..2904439))
location: region:2903604-2904439:-1
so has part: feature:2904307-2904439:-1:exon
so has part: feature:2903604-2904220:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2904307-2904439:-1:exon

position:2904307:-1
position: 2904307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2903604-2904220:-1:exon

position:2904220:-1
position: 2904220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 2984327..2989326
location: region:2984327-2989326:1
so has part: feature:2984327-2989326:1:region

position:2984327:1
position: 2984327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2989326:1
position: 2989326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2984327-2989326:1:region

IARS
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: IARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3354925..3454375)
location: region:3354925-3454375:-1
so has part: feature:3354925-3454375:-1:exon
subclass of: SO_0000010

101822201
type: Gene
SIO_000068: ncbigene

position:3354925:-1
position: 3354925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3454375:-1
position: 3454375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3354925-3454375:-1:exon

IARS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IARS
product: isoleucyl-tRNA synthetase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301396.1
SIO_010081: IARS
subclass of: SO_0000673
so part of: IARS
location: complement(join(3354925..3355518,3359867..3360019,3360894..3361037,3365311..3365436,3366410..3366521,3369934..3370110,3370922..3371017,3371498..3371601,3372438..3372612,3377278..3377361,3377479..3377581,3380417..3380538,3380922..3380999,3381318..3381409,3385124..3385244,3388015..3388162,3391574..3391657,3392326..3392412,3397801..3397995,3399875..3399948,3405411..3405537,3416743..3416841,3420966..3421057,3422535..3422657,3427128..3427223,3428744..3428804,3433639..3433726,3434876..3435023,3437545..3437662,3445731..3445813,3448587..3448706,3449498..3449654,3450163..3450282,3452525..3452614,3454320..3454375))
location: region:3354925-3454375:-1
so has part: feature:3454320-3454375:-1:exon
so has part: feature:3452525-3452614:-1:exon
so has part: feature:3450163-3450282:-1:exon
so has part: feature:3449498-3449654:-1:exon
so has part: feature:3448587-3448706:-1:exon
so has part: feature:3445731-3445813:-1:exon
so has part: feature:3437545-3437662:-1:exon
so has part: feature:3434876-3435023:-1:exon
so has part: feature:3433639-3433726:-1:exon
so has part: feature:3428744-3428804:-1:exon
so has part: feature:3427128-3427223:-1:exon
so has part: feature:3422535-3422657:-1:exon
so has part: feature:3420966-3421057:-1:exon
so has part: feature:3416743-3416841:-1:exon
so has part: feature:3405411-3405537:-1:exon
so has part: feature:3399875-3399948:-1:exon
so has part: feature:3397801-3397995:-1:exon
so has part: feature:3392326-3392412:-1:exon
so has part: feature:3391574-3391657:-1:exon
so has part: feature:3388015-3388162:-1:exon
so has part: feature:3385124-3385244:-1:exon
so has part: feature:3381318-3381409:-1:exon
so has part: feature:3380922-3380999:-1:exon
so has part: feature:3380417-3380538:-1:exon
so has part: feature:3377479-3377581:-1:exon
so has part: feature:3377278-3377361:-1:exon
so has part: feature:3372438-3372612:-1:exon
so has part: feature:3371498-3371601:-1:exon
so has part: feature:3370922-3371017:-1:exon
so has part: feature:3369934-3370110:-1:exon
so has part: feature:3366410-3366521:-1:exon
so has part: feature:3365311-3365436:-1:exon
so has part: feature:3360894-3361037:-1:exon
so has part: feature:3359867-3360019:-1:exon
so has part: feature:3354925-3355518:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3454320-3454375:-1:exon

position:3454320:-1
position: 3454320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3452525-3452614:-1:exon

position:3452525:-1
position: 3452525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3452614:-1
position: 3452614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3450163-3450282:-1:exon

position:3450163:-1
position: 3450163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450282:-1
position: 3450282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3449498-3449654:-1:exon

position:3449498:-1
position: 3449498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3449654:-1
position: 3449654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3448587-3448706:-1:exon

position:3448587:-1
position: 3448587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3448706:-1
position: 3448706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3445731-3445813:-1:exon

position:3445731:-1
position: 3445731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3445813:-1
position: 3445813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3437545-3437662:-1:exon

position:3437545:-1
position: 3437545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3437662:-1
position: 3437662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3434876-3435023:-1:exon

position:3434876:-1
position: 3434876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3435023:-1
position: 3435023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3433639-3433726:-1:exon

position:3433639:-1
position: 3433639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3433726:-1
position: 3433726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3428744-3428804:-1:exon

position:3428744:-1
position: 3428744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3428804:-1
position: 3428804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3427128-3427223:-1:exon

position:3427128:-1
position: 3427128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3427223:-1
position: 3427223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3422535-3422657:-1:exon

position:3422535:-1
position: 3422535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3422657:-1
position: 3422657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3420966-3421057:-1:exon

position:3420966:-1
position: 3420966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3421057:-1
position: 3421057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3416743-3416841:-1:exon

position:3416743:-1
position: 3416743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3416841:-1
position: 3416841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3405411-3405537:-1:exon

position:3405411:-1
position: 3405411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3405537:-1
position: 3405537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3399875-3399948:-1:exon

position:3399875:-1
position: 3399875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3399948:-1
position: 3399948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3397801-3397995:-1:exon

position:3397801:-1
position: 3397801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3397995:-1
position: 3397995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3392326-3392412:-1:exon

position:3392326:-1
position: 3392326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3392412:-1
position: 3392412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3391574-3391657:-1:exon

position:3391574:-1
position: 3391574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3391657:-1
position: 3391657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3388015-3388162:-1:exon

position:3388015:-1
position: 3388015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3388162:-1
position: 3388162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3385124-3385244:-1:exon

position:3385124:-1
position: 3385124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3385244:-1
position: 3385244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3381318-3381409:-1:exon

position:3381318:-1
position: 3381318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3381409:-1
position: 3381409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3380922-3380999:-1:exon

position:3380922:-1
position: 3380922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380999:-1
position: 3380999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3380417-3380538:-1:exon

position:3380417:-1
position: 3380417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3380538:-1
position: 3380538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3377479-3377581:-1:exon

position:3377479:-1
position: 3377479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3377581:-1
position: 3377581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3377278-3377361:-1:exon

position:3377278:-1
position: 3377278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3377361:-1
position: 3377361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3372438-3372612:-1:exon

position:3372438:-1
position: 3372438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3372612:-1
position: 3372612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3371498-3371601:-1:exon

position:3371498:-1
position: 3371498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371601:-1
position: 3371601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3370922-3371017:-1:exon

position:3370922:-1
position: 3370922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371017:-1
position: 3371017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3369934-3370110:-1:exon

position:3369934:-1
position: 3369934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3370110:-1
position: 3370110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3366410-3366521:-1:exon

position:3366410:-1
position: 3366410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3366521:-1
position: 3366521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:3365311-3365436:-1:exon

position:3365311:-1
position: 3365311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3365436:-1
position: 3365436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:3360894-3361037:-1:exon

position:3360894:-1
position: 3360894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3361037:-1
position: 3361037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:3359867-3360019:-1:exon

position:3359867:-1
position: 3359867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3360019:-1
position: 3360019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:3354925-3355518:-1:exon

position:3355518:-1
position: 3355518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IARS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X2
translation: MVQQVPENINFPNEEEKILTLWKNLNCFKECLKQSKNRPRFNFYDGPPFATGLPHYGHILAGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEAYNKECRGIVMRYAKEWEFSVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMPFSTACNTPLSNFESHQNYKDVQDPSVTVSFPLEEDPNVSLVAWTTTPWTLPSNLALCVNPELQYVKLRDKATGKIYILMESRLVALYKSDSDYQILDRFPGIVLKGKRYIPLFEYFIECKEKGAFTVLVDGYVKEEEGTGVVHQAPYFGADDYRVCMDFNVIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKHIIRWLKEKGRLIHSTTFQHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVGEKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDLEEVVCVGSIAELEELSGVKVTDLHRESIDQLPIPSRCGKGWLRRVPEVFDCWFESGSMPYAQVHYPFHNRRELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMHIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLILFFKAEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRALEKYVLEELNVRALTLSADKARYGVRLRAEPEHTVLGRRLKGAFKPLVAAIKELSSEQLESFQETGSIVVEGHELHREDLRLMYQMTEGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRVLPEGEYLDSVIQHHAEFIFATIKAELKPYPVPTSKEVLIQETTQLKGSELEITLARGGVCQSVGPACAYVNLKVCVNGTEQDGVLLLENPKGDNTLNFTGLVDAVSCIFGLKNCKLTVFNGNTELINQTDLLGLSGKTLHVTAGSAPALASSPSALLCQYINLQLINAKPQECQKGTVGTLLMENPVGQNGLTYKGLLHETAKVFGLRSRRLKLFLDEALTHEITKDISMKNLNMKTLYVHVIPTTAEC
SIO_010081: IARS
subclass of: SO_0000673
so part of: IARS
location: complement(join(3355436..3355518,3359867..3360019,3360894..3361037,3365311..3365436,3366410..3366521,3369934..3370110,3370922..3371017,3371498..3371601,3372438..3372612,3377278..3377361,3377479..3377581,3380417..3380538,3380922..3380999,3381318..3381409,3385124..3385244,3388015..3388162,3391574..3391657,3392326..3392412,3397801..3397995,3399875..3399948,3405411..3405537,3416743..3416841,3420966..3421057,3422535..3422657,3427128..3427223,3428744..3428804,3433639..3433726,3434876..3435023,3437545..3437662,3445731..3445813,3448587..3448706,3449498..3449654,3450163..3450281))
location: region:3355436-3450281:-1
so has part: feature:3450163-3450281:-1:exon
so has part: feature:3449498-3449654:-1:exon
so has part: feature:3448587-3448706:-1:exon
so has part: feature:3445731-3445813:-1:exon
so has part: feature:3437545-3437662:-1:exon
so has part: feature:3434876-3435023:-1:exon
so has part: feature:3433639-3433726:-1:exon
so has part: feature:3428744-3428804:-1:exon
so has part: feature:3427128-3427223:-1:exon
so has part: feature:3422535-3422657:-1:exon
so has part: feature:3420966-3421057:-1:exon
so has part: feature:3416743-3416841:-1:exon
so has part: feature:3405411-3405537:-1:exon
so has part: feature:3399875-3399948:-1:exon
so has part: feature:3397801-3397995:-1:exon
so has part: feature:3392326-3392412:-1:exon
so has part: feature:3391574-3391657:-1:exon
so has part: feature:3388015-3388162:-1:exon
so has part: feature:3385124-3385244:-1:exon
so has part: feature:3381318-3381409:-1:exon
so has part: feature:3380922-3380999:-1:exon
so has part: feature:3380417-3380538:-1:exon
so has part: feature:3377479-3377581:-1:exon
so has part: feature:3377278-3377361:-1:exon
so has part: feature:3372438-3372612:-1:exon
so has part: feature:3371498-3371601:-1:exon
so has part: feature:3370922-3371017:-1:exon
so has part: feature:3369934-3370110:-1:exon
so has part: feature:3366410-3366521:-1:exon
so has part: feature:3365311-3365436:-1:exon
so has part: feature:3360894-3361037:-1:exon
so has part: feature:3359867-3360019:-1:exon
so has part: feature:3355436-3355518:-1:exon

XP_016156882.1
type: Protein
SIO_000068: ncbiprotein

position:3355436:-1
position: 3355436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450281:-1
position: 3450281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3450163-3450281:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3449498-3449654:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3448587-3448706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3445731-3445813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3437545-3437662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3434876-3435023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3433639-3433726:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3428744-3428804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3427128-3427223:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3422535-3422657:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3420966-3421057:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3416743-3416841:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3405411-3405537:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3399875-3399948:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3397801-3397995:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3392326-3392412:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3391574-3391657:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3388015-3388162:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3385124-3385244:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3381318-3381409:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3380922-3380999:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3380417-3380538:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3377479-3377581:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3377278-3377361:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3372438-3372612:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3371498-3371601:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3370922-3371017:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3369934-3370110:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3366410-3366521:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3365311-3365436:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3360894-3361037:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3359867-3360019:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3355436-3355518:-1:exon

IARS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IARS
product: isoleucyl-tRNA synthetase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005052857.2
SIO_010081: IARS
subclass of: SO_0000673
so part of: IARS
location: complement(join(3359301..3359637,3360894..3361037,3365311..3365436,3366410..3366521,3369934..3370110,3370922..3371017,3371498..3371601,3372438..3372612,3377278..3377361,3377479..3377581,3380417..3380538,3380922..3380999,3381318..3381409,3385124..3385244,3388015..3388162,3391574..3391657,3392326..3392412,3397801..3397995,3399875..3399948,3405411..3405537,3416743..3416841,3420966..3421057,3422535..3422657,3427128..3427223,3428744..3428804,3432744..3432827))
location: region:3359301-3432827:-1
so has part: feature:3432744-3432827:-1:exon
so has part: feature:3428744-3428804:-1:exon
so has part: feature:3427128-3427223:-1:exon
so has part: feature:3422535-3422657:-1:exon
so has part: feature:3420966-3421057:-1:exon
so has part: feature:3416743-3416841:-1:exon
so has part: feature:3405411-3405537:-1:exon
so has part: feature:3399875-3399948:-1:exon
so has part: feature:3397801-3397995:-1:exon
so has part: feature:3392326-3392412:-1:exon
so has part: feature:3391574-3391657:-1:exon
so has part: feature:3388015-3388162:-1:exon
so has part: feature:3385124-3385244:-1:exon
so has part: feature:3381318-3381409:-1:exon
so has part: feature:3380922-3380999:-1:exon
so has part: feature:3380417-3380538:-1:exon
so has part: feature:3377479-3377581:-1:exon
so has part: feature:3377278-3377361:-1:exon
so has part: feature:3372438-3372612:-1:exon
so has part: feature:3371498-3371601:-1:exon
so has part: feature:3370922-3371017:-1:exon
so has part: feature:3369934-3370110:-1:exon
so has part: feature:3366410-3366521:-1:exon
so has part: feature:3365311-3365436:-1:exon
so has part: feature:3360894-3361037:-1:exon
so has part: feature:3359301-3359637:-1:exon

position:3359301:-1
position: 3359301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3432827:-1
position: 3432827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3432744-3432827:-1:exon

position:3432744:-1
position: 3432744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3428744-3428804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3427128-3427223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3422535-3422657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3420966-3421057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3416743-3416841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3405411-3405537:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3399875-3399948:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3397801-3397995:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3392326-3392412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3391574-3391657:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3388015-3388162:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3385124-3385244:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3381318-3381409:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3380922-3380999:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3380417-3380538:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3377479-3377581:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3377278-3377361:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3372438-3372612:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3371498-3371601:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3370922-3371017:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3369934-3370110:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3366410-3366521:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3365311-3365436:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3360894-3361037:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3359301-3359637:-1:exon

position:3359637:-1
position: 3359637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IARS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isoleucine--tRNA ligase, cytoplasmic isoform X1
translation: MESRLVALYKSDSDYQILDRFPGIVLKGKRYIPLFEYFIECKEKGAFTVLVDGYVKEEEGTGVVHQAPYFGADDYRVCMDFNVIQKDSVPVCPVDASGCFTAEVTDFAGQYVKDADKHIIRWLKEKGRLIHSTTFQHSYPFCWRSDTPLIYKAVPSWFVRVEHMVEKLLENNAQCYWVPDFVGEKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDLEEVVCVGSIAELEELSGVKVTDLHRESIDQLPIPSRCGKGWLRRVPEVFDCWFESGSMPYAQVHYPFHNRRELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQKMSKRKKNYPDPMHIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAYRFLVQNVQILQHKDEGREFLYNENTVKESNNIMDKWILSFTQSLILFFKAEMAAYRLYTVVPRLVKFVDVLTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITELMYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRKTIPVKYPLKEVVVIHQDPEALENIRALEKYVLEELNVRALTLSADKARYGVRLRAEPEHTVLGRRLKGAFKPLVAAIKELSSEQLESFQETGSIVVEGHELHREDLRLMYQMTEGSAQFEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRVLPEGEYLDSVIQHHAEFIFATIKAELKPYPVPTSKEVLIQETTQLKGSELEITLARGGVCQSVGPACAYVNLKVCVNGTEQDGVLLLENPKGDNTLNFTGLVDAVSCIFGLKNCKLTVFNGNTELINQTDLLGLSGKTLHVTAGSAPALASSPSALLCQYINLQLINAKPQECQKGTVGTLLMENPVGQNGLTYKGLLHETAKVFGLRSRRLKLFLDEALTHGKHKGLVCLSEDPWNLLLRSCSCSLRSSLIAKSTLFTLWFVILPCNSILA
SIO_010081: IARS
subclass of: SO_0000673
so part of: IARS
location: complement(join(3359333..3359637,3360894..3361037,3365311..3365436,3366410..3366521,3369934..3370110,3370922..3371017,3371498..3371601,3372438..3372612,3377278..3377361,3377479..3377581,3380417..3380538,3380922..3380999,3381318..3381409,3385124..3385244,3388015..3388162,3391574..3391657,3392326..3392412,3397801..3397995,3399875..3399948,3405411..3405537,3416743..3416841,3420966..3421057,3422535..3422657,3427128..3427223,3428744..3428804,3432744..3432802))
location: region:3359333-3432802:-1
so has part: feature:3432744-3432802:-1:exon
so has part: feature:3428744-3428804:-1:exon
so has part: feature:3427128-3427223:-1:exon
so has part: feature:3422535-3422657:-1:exon
so has part: feature:3420966-3421057:-1:exon
so has part: feature:3416743-3416841:-1:exon
so has part: feature:3405411-3405537:-1:exon
so has part: feature:3399875-3399948:-1:exon
so has part: feature:3397801-3397995:-1:exon
so has part: feature:3392326-3392412:-1:exon
so has part: feature:3391574-3391657:-1:exon
so has part: feature:3388015-3388162:-1:exon
so has part: feature:3385124-3385244:-1:exon
so has part: feature:3381318-3381409:-1:exon
so has part: feature:3380922-3380999:-1:exon
so has part: feature:3380417-3380538:-1:exon
so has part: feature:3377479-3377581:-1:exon
so has part: feature:3377278-3377361:-1:exon
so has part: feature:3372438-3372612:-1:exon
so has part: feature:3371498-3371601:-1:exon
so has part: feature:3370922-3371017:-1:exon
so has part: feature:3369934-3370110:-1:exon
so has part: feature:3366410-3366521:-1:exon
so has part: feature:3365311-3365436:-1:exon
so has part: feature:3360894-3361037:-1:exon
so has part: feature:3359333-3359637:-1:exon

XP_005052914.1
type: Protein
SIO_000068: ncbiprotein

position:3359333:-1
position: 3359333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3432802:-1
position: 3432802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3432744-3432802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3428744-3428804:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3427128-3427223:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3422535-3422657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3420966-3421057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3416743-3416841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3405411-3405537:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3399875-3399948:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3397801-3397995:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3392326-3392412:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3391574-3391657:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3388015-3388162:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3385124-3385244:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3381318-3381409:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3380922-3380999:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3380417-3380538:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3377479-3377581:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3377278-3377361:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3372438-3372612:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3371498-3371601:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3370922-3371017:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3369934-3370110:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3366410-3366521:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3365311-3365436:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3360894-3361037:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3359333-3359637:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 59894
estimated length: 5000
gap type: between scaffolds
so part of: sequence
location: 3491208..3496207
location: region:3491208-3496207:1
so has part: feature:3491208-3496207:1:region

position:3491208:1
position: 3491208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3496207:1
position: 3496207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3491208-3496207:1:region

LOC101817420
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101817420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3507533..3509604
location: region:3507533-3509604:1
so has part: feature:3507533-3509604:1:exon
subclass of: SO_0000010

101817420
type: Gene
SIO_000068: ncbigene

position:3507533:1
position: 3507533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3509604:1
position: 3509604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507533-3509604:1:exon

LOC101817420
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101817420
product: PHD finger protein 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052924.1
SIO_010081: LOC101817420
subclass of: SO_0000673
so part of: LOC101817420
location: join(3507533..3507834,3508151..3508242,3508329..3508430,3508710..3508834,3508911..3509073,3509159..3509265,3509481..3509604)
location: region:3507533-3509604:1
so has part: feature:3507533-3507834:1:exon
so has part: feature:3508151-3508242:1:exon
so has part: feature:3508329-3508430:1:exon
so has part: feature:3508710-3508834:1:exon
so has part: feature:3508911-3509073:1:exon
so has part: feature:3509159-3509265:1:exon
so has part: feature:3509481-3509604:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3507533-3507834:1:exon

position:3507834:1
position: 3507834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3508151-3508242:1:exon

position:3508151:1
position: 3508151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3508242:1
position: 3508242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3508329-3508430:1:exon

position:3508329:1
position: 3508329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3508430:1
position: 3508430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3508710-3508834:1:exon

position:3508710:1
position: 3508710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3508834:1
position: 3508834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3508911-3509073:1:exon

position:3508911:1
position: 3508911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3509073:1
position: 3509073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3509159-3509265:1:exon

position:3509159:1
position: 3509159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3509265:1
position: 3509265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3509481-3509604:1:exon

position:3509481:1
position: 3509481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101817420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101817420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 7-like
translation: MCDRKQEGPDAREPACMLCHRTEADPDTCGDKLEKFGLCAHVFCLYFATLLPRQENERAGLMGFLPRDIHLAVRRAAQKHCCVCGQSGATILCCEENCGRWFHLPCAKEGGCVTQYLPSYSSYCPEHCPGLDVQVTPEPGTECPICLEPVEDRMSYRTMVCPACKRAWFHRDCIQGQAMRAGLLFFQCPLCRDGEEFLVQMFIMGIRIPFREPSWEDNDAFEDVGERHRQCKCLSPGGREEAEEEGQVGKL
SIO_010081: LOC101817420
subclass of: SO_0000673
so part of: LOC101817420
location: join(3507792..3507834,3508151..3508242,3508329..3508430,3508710..3508834,3508911..3509073,3509159..3509265,3509481..3509604)
location: region:3507792-3509604:1
so has part: feature:3507792-3507834:1:exon
so has part: feature:3508151-3508242:1:exon
so has part: feature:3508329-3508430:1:exon
so has part: feature:3508710-3508834:1:exon
so has part: feature:3508911-3509073:1:exon
so has part: feature:3509159-3509265:1:exon
so has part: feature:3509481-3509604:1:exon

XP_005052981.1
type: Protein
SIO_000068: ncbiprotein

position:3507792:1
position: 3507792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3507792-3507834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3508151-3508242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3508329-3508430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3508710-3508834:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3508911-3509073:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3509159-3509265:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3509481-3509604:1:exon

LOC101817233
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101817233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3510674..3514280)
location: region:3510674-3514280:-1
so has part: feature:3510674-3514280:-1:exon
subclass of: SO_0000010

101817233
type: Gene
SIO_000068: ncbigene

position:3510674:-1
position: 3510674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3514280:-1
position: 3514280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3510674-3514280:-1:exon

LOC101817233
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101817233
product: serine/arginine repetitive matrix protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052923.1
SIO_010081: LOC101817233
subclass of: SO_0000673
so part of: LOC101817233
location: complement(join(3510674..3511175,3511405..3513667,3513822..3513974,3514229..3514280))
location: region:3510674-3514280:-1
so has part: feature:3514229-3514280:-1:exon
so has part: feature:3513822-3513974:-1:exon
so has part: feature:3511405-3513667:-1:exon
so has part: feature:3510674-3511175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3514229-3514280:-1:exon

position:3514229:-1
position: 3514229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3513822-3513974:-1:exon

position:3513822:-1
position: 3513822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3513974:-1
position: 3513974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3511405-3513667:-1:exon

position:3511405:-1
position: 3511405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3513667:-1
position: 3513667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3510674-3511175:-1:exon

position:3511175:-1
position: 3511175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101817233
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101817233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine repetitive matrix protein 2-like
translation: MPGNAFTPEAGNRQRKRGEAVRKHLRLESQGRKQXCSSCAAEGTHRRCSGLRNCTESWECDICAGLGTASRDGPELHGPSLTSQSGLEPSHGSPESEAISSSSHSLLPSGLAPQSPETSRRSSHRHAAAQTSLPPSSLDTGSSSTSGSTYSSSTDPENRVHCRCAGPERRRKRSRQQGRAPNRPIQSRSHRDRSTRAKPRAERRRQRETPSRQFPRRSRSRRQRRAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSKSRHDRDDRTASGADRPRQTETPSGPSPRRSRSRRQRQAQSPAVRSRSHRDRSTRAKPRAERRRQRETPSRQFPRRSRSHRQRQAQSPSFLIRDVYDKSHRTISGTERPSGRETPSGPDASSRRSCSRLQRSRFHLQRWALSPAVRSRSHRDRSHRRISRAERPRRRDTPLWASATRSRSRLQRRAQSPAVQTRSRRGRDDRTASGADRPRRAETPSGPSPRRSRSRRQRRAPSPGGGGGRLQRRASNGPVQCRSRQDRSSSTAARADRPRRRGTPSGTSRRSNRGRQRHQASTWT
SIO_010081: LOC101817233
subclass of: SO_0000673
so part of: LOC101817233
location: complement(join(3510674..3511175,3511405..3513667,3513822..3513974,3514229..3514280))
location: region:3510674-3514280:-1
so has part: feature:3514229-3514280:-1:exon
so has part: feature:3513822-3513974:-1:exon
so has part: feature:3511405-3513667:-1:exon
so has part: feature:3510674-3511175:-1:exon

XP_005052980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3514229-3514280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3513822-3513974:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3511405-3513667:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3510674-3511175:-1:exon

NOL8
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NOL8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3518521..3529498)
location: region:3518521-3529498:-1
so has part: feature:3518521-3529498:-1:exon
subclass of: SO_0000010

101814681
type: Gene
SIO_000068: ncbigene

position:3518521:-1
position: 3518521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3529498:-1
position: 3529498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3518521-3529498:-1:exon

NOL8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NOL8
product: nucleolar protein 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301455.1
SIO_010081: NOL8
subclass of: SO_0000673
so part of: NOL8
location: complement(join(3518521..3518627,3519512..3519594,3520267..3520334,3520784..3520910,3521119..3521387,3521925..3522008,3522525..3522666,3522997..3523081,3523399..3523518,3523848..3523964,3524248..3525594,3525643..3526212,3526516..3526584,3527467..3527614,3527919..3527997,3528778..3528840,3528982..3529165,3529455..3529498))
location: region:3518521-3529498:-1
so has part: feature:3529455-3529498:-1:exon
so has part: feature:3528982-3529165:-1:exon
so has part: feature:3528778-3528840:-1:exon
so has part: feature:3527919-3527997:-1:exon
so has part: feature:3527467-3527614:-1:exon
so has part: feature:3526516-3526584:-1:exon
so has part: feature:3525643-3526212:-1:exon
so has part: feature:3524248-3525594:-1:exon
so has part: feature:3523848-3523964:-1:exon
so has part: feature:3523399-3523518:-1:exon
so has part: feature:3522997-3523081:-1:exon
so has part: feature:3522525-3522666:-1:exon
so has part: feature:3521925-3522008:-1:exon
so has part: feature:3521119-3521387:-1:exon
so has part: feature:3520784-3520910:-1:exon
so has part: feature:3520267-3520334:-1:exon
so has part: feature:3519512-3519594:-1:exon
so has part: feature:3518521-3518627:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3529455-3529498:-1:exon

position:3529455:-1
position: 3529455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3528982-3529165:-1:exon

position:3528982:-1
position: 3528982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3529165:-1
position: 3529165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3528778-3528840:-1:exon

position:3528778:-1
position: 3528778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3528840:-1
position: 3528840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3527919-3527997:-1:exon