Ficedula albicollis isolate OC2 chromosome 11, FicAlb1.5, whole genome shotgun sequence.
type: Entry
definition: Ficedula albicollis isolate OC2 chromosome 11, FicAlb1.5, whole genome shotgun sequence.
sequence version: NC_021683.1
sequence date: 2016-04-20
sequence: sequence
division: CON
label: NC_021683.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA208061
dblink: SAMN02981387
keyword: WGS
keyword: RefSeq
source: Ficedula albicollis (collared flycatcher)
organism: Ficedula albicollis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
reference: 1
references: 23103876
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM002000.1.\nAssembly name: FicAlb1.5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Uppsala University on 2013/06/24.\nThe original whole-genome shotgun project has the accession\nAGTO00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: FicAlb1.5\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina GAII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Ficedula albicollis Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21727166
topology: linear
so has quality: SO_0000987
location: 1..21727166
location: region:1-21727166:1
RO_0002162: 59894

NC_021683
type: RefSeq
SIO_000068: refseq

PRJNA208061
type: BioProject
SIO_000068: bioproject

SAMN02981387
type: BioSample
SIO_000068: biosample

1
title: The genomic landscape of species divergence in Ficedula flycatchers
author: Ellegren, H.
author: Smeds, L.
author: Burri, R.
author: Olason, P.I.
author: Backstrom, N.
author: Kawakami, T.
author: Kunstner, A.
author: Makinen, H.
author: Nadachowska-Brzyska, K.
author: Qvarnstrom, A.
author: Uebbing, S.
author: Wolf, J.B.
journal: Nature
volume: 491
issue: 7426
pages: 756-760
year: 2012
pubmed: 23103876

23103876
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21727166:1
position: 21727166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21727166:1:source
so part of: sequence
organism: Ficedula albicollis
mol type: genomic DNA
isolate: OC2
chromosome: 11
sex: male
country: Sweden: Oland
collection date: 2009

59894
type: Taxonomy
SIO_000068: taxonomy

LOC101815220
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101815220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11..10853)
location: region:11-10853:-1
so has part: feature:11-10853:-1:exon
subclass of: SO_0000010

101815220
type: Gene
SIO_000068: ncbigene

position:11:-1
position: 11
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10853:-1
position: 10853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11-10853:-1:exon

LOC101815220
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101815220
product: carbohydrate sulfotransferase 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016301150.1
SIO_010081: LOC101815220
subclass of: SO_0000673
so part of: LOC101815220
location: complement(join(11..321,3731..4493,10775..10853))
location: region:11-10853:-1
so has part: feature:10775-10853:-1:exon
so has part: feature:3731-4493:-1:exon
so has part: feature:11-321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10775-10853:-1:exon

position:10775:-1
position: 10775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3731-4493:-1:exon

position:3731:-1
position: 3731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4493:-1
position: 4493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11-321:-1:exon

position:321:-1
position: 321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101815220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101815220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 5 isoform X3
translation: MSHRQSFSCCPSSVRMARIRIPSTVVIIFVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSELACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQELPGTVVKHSILSLVSMVLRGALRNTEHCLCEETWRRSQIYTLPAVQEFVHLYREAVSKVERKRQVGADRRHFARSRQLLSCVLSPQVVPA
SIO_010081: LOC101815220
subclass of: SO_0000673
so part of: LOC101815220
location: complement(join(49..321,3731..4493,10775..10791))
location: region:49-10791:-1
so has part: feature:10775-10791:-1:exon
so has part: feature:3731-4493:-1:exon
so has part: feature:49-321:-1:exon

XP_016156636.1
type: Protein
SIO_000068: ncbiprotein

position:49:-1
position: 49
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10791:-1
position: 10791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10775-10791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3731-4493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49-321:-1:exon

LOC101815220
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101815220
product: carbohydrate sulfotransferase 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016301148.1
SIO_010081: LOC101815220
subclass of: SO_0000673
so part of: LOC101815220
location: complement(join(2476..4493,10775..10853))
location: region:2476-10853:-1
so has part: feature:10775-10853:-1:exon
so has part: feature:2476-4493:-1:exon

position:2476:-1
position: 2476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10775-10853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2476-4493:-1:exon

LOC101815220
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101815220
product: carbohydrate sulfotransferase 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_016301149.1
SIO_010081: LOC101815220
subclass of: SO_0000673
so part of: LOC101815220
location: complement(join(2477..4493,10323..10410))
location: region:2477-10410:-1
so has part: feature:10323-10410:-1:exon
so has part: feature:2477-4493:-1:exon

position:2477:-1
position: 2477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10410:-1
position: 10410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10323-10410:-1:exon

position:10323:-1
position: 10323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2477-4493:-1:exon

LOC101815220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101815220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 6 isoform X1
translation: MSHRQSFSCCPSSVRMARIRIPSTVVIIFVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSELACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEVCRSHVQIYETASLKPPNFLKDRYLMVRFEDLVRDPLSEISEMYKFADLSLTPRLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKVKKIQEVCKGAINILGYQLVDSEKEQRDLALDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC101815220
subclass of: SO_0000673
so part of: LOC101815220
location: complement(join(3284..4493,10775..10791))
location: region:3284-10791:-1
so has part: feature:10775-10791:-1:exon
so has part: feature:3284-4493:-1:exon

XP_016156634.1
type: Protein
SIO_000068: ncbiprotein

position:3284:-1
position: 3284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10775-10791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3284-4493:-1:exon

LOC101815220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101815220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 6 isoform X2
translation: MARIRIPSTVVIIFVTVQTGFLLFMYARYSSFMPQSEEKPSQVHILILSSWRSGSSFVGQLFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMPWKRNLSDLFQWAASRALCSAPACDSFQRTDITSELACKTLCGRYPFSKVEEACKTYSHVVIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVVKSREQSVKALARDNGIVLSTNGTKVEDSKYKVMQEVCRSHVQIYETASLKPPNFLKDRYLMVRFEDLVRDPLSEISEMYKFADLSLTPRLKSWIYNITHGQGPGKKKEAFKITSRDAVSVSQAWRNVLSFQKVKKIQEVCKGAINILGYQLVDSEKEQRDLALDLVLPRRQNQFSWSSFNPKH
SIO_010081: LOC101815220
subclass of: SO_0000673
so part of: LOC101815220
location: complement(3284..4465)
location: region:3284-4465:-1
so has part: feature:3284-4465:-1:exon

XP_016156635.1
type: Protein
SIO_000068: ncbiprotein

position:4465:-1
position: 4465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3284-4465:-1:exon

TMEM231
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(14709..19967)
location: region:14709-19967:-1
so has part: feature:14709-19967:-1:exon
subclass of: SO_0000010

101815019
type: Gene
SIO_000068: ncbigene

position:14709:-1
position: 14709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19967:-1
position: 19967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14709-19967:-1:exon

TMEM231
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMEM231
product: transmembrane protein 231
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016301151.1
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(14709..15233,16104..16209,16337..16418,16730..16873,18238..18366,19390..19559,19636..19967))
location: region:14709-19967:-1
so has part: feature:19636-19967:-1:exon
so has part: feature:19390-19559:-1:exon
so has part: feature:18238-18366:-1:exon
so has part: feature:16730-16873:-1:exon
so has part: feature:16337-16418:-1:exon
so has part: feature:16104-16209:-1:exon
so has part: feature:14709-15233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:19636-19967:-1:exon

position:19636:-1
position: 19636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19390-19559:-1:exon

position:19390:-1
position: 19390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19559:-1
position: 19559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:18238-18366:-1:exon

position:18238:-1
position: 18238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18366:-1
position: 18366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16730-16873:-1:exon

position:16730:-1
position: 16730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16873:-1
position: 16873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16337-16418:-1:exon

position:16337:-1
position: 16337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16418:-1
position: 16418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16104-16209:-1:exon

position:16104:-1
position: 16104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16209:-1
position: 16209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14709-15233:-1:exon

position:15233:-1
position: 15233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM231
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TMEM231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 231
translation: MAGVDLFSHPALYTRYRAGLCSAAALALLLITALTYVPPLLVAYRSHGFWLKQSAYLEQPTVRFRYEVLFVATMGSGPGSFLAWSTFPAFNRLQEDRLRVPLLSTREEDKNQDGKMDQLHFKLELPLRPAEHVVGIQLILLFSYQLYRMSTFVMQSMAFLQFFSPVPGSQLYVNGDLKLNQRQLLNHCGLDTRYNVSVVNGTSPFASDYDLANIIAAYWDRNVTTVFSDPSPVWMTGRATDAPFIVNATIHYPVEVILYQPGFWEIIKFAWIQYVSILLIFLWVFGRIKTFLFQNQVLTTIPVSPVLPVSPVLSYKQHQS
SIO_010081: TMEM231
subclass of: SO_0000673
so part of: TMEM231
location: complement(join(15044..15233,16104..16209,16337..16418,16730..16873,18238..18366,19390..19559,19636..19777))
location: region:15044-19777:-1
so has part: feature:19636-19777:-1:exon
so has part: feature:19390-19559:-1:exon
so has part: feature:18238-18366:-1:exon
so has part: feature:16730-16873:-1:exon
so has part: feature:16337-16418:-1:exon
so has part: feature:16104-16209:-1:exon
so has part: feature:15044-15233:-1:exon

XP_016156637.1
type: Protein
SIO_000068: ncbiprotein

position:15044:-1
position: 15044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19777:-1
position: 19777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19636-19777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19390-19559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:18238-18366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16730-16873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16337-16418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16104-16209:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15044-15233:-1:exon

GABARAPL2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 20212..29493
location: region:20212-29493:1
so has part: feature:20212-29493:1:exon
subclass of: SO_0000010

101814814
type: Gene
SIO_000068: ncbigene

position:20212:1
position: 20212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29493:1
position: 29493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20212-29493:1:exon

GABARAPL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GABARAPL2
product: GABA type A receptor associated protein like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052185.2
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(20212..20343,20653..20708,22714..22886,24457..29493)
location: region:20212-29493:1
so has part: feature:20212-20343:1:exon
so has part: feature:20653-20708:1:exon
so has part: feature:22714-22886:1:exon
so has part: feature:24457-29493:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20212-20343:1:exon

position:20343:1
position: 20343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20653-20708:1:exon

position:20653:1
position: 20653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20708:1
position: 20708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22714-22886:1:exon

position:22714:1
position: 22714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22886:1
position: 22886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24457-29493:1:exon

position:24457:1
position: 24457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABARAPL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GABARAPL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor-associated protein-like 2
translation: MKWMFKEDHALEHRCVESAKIRAKYPDRVPVIVEKVSGSQIVDIDKRKYLVPSDITVAQFMWIIRKRIQLPSEKAIFLFVDKTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFGF
SIO_010081: GABARAPL2
subclass of: SO_0000673
so part of: GABARAPL2
location: join(20310..20343,20653..20708,22714..22886,24457..24547)
location: region:20310-24547:1
so has part: feature:20310-20343:1:exon
so has part: feature:20653-20708:1:exon
so has part: feature:22714-22886:1:exon
so has part: feature:24457-24547:1:exon

XP_005052242.1
type: Protein
SIO_000068: ncbiprotein

position:20310:1
position: 20310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24547:1
position: 24547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20310-20343:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20653-20708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22714-22886:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24457-24547:1:exon

ADAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(24721..49999)
location: region:24721-49999:-1
so has part: feature:24721-49999:-1:exon
subclass of: SO_0000010

101814233
type: Gene
SIO_000068: ncbigene

position:24721:-1
position: 24721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49999:-1
position: 49999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24721-49999:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ADAT1
product: adenosine deaminase, tRNA specific 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016301147.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(24721..30108,34805..34891,38751..38850,41179..41324,43796..44414,48582..48650,49314..49505,49925..49999))
location: region:24721-49999:-1
so has part: feature:49925-49999:-1:exon
so has part: feature:49314-49505:-1:exon
so has part: feature:48582-48650:-1:exon
so has part: feature:43796-44414:-1:exon
so has part: feature:41179-41324:-1:exon
so has part: feature:38751-38850:-1:exon
so has part: feature:34805-34891:-1:exon
so has part: feature:24721-30108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49925-49999:-1:exon

position:49925:-1
position: 49925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49314-49505:-1:exon

position:49314:-1
position: 49314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49505:-1
position: 49505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48582-48650:-1:exon

position:48582:-1
position: 48582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48650:-1
position: 48650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:43796-44414:-1:exon

position:43796:-1
position: 43796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44414:-1
position: 44414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:41179-41324:-1:exon

position:41179:-1
position: 41179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41324:-1
position: 41324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:38751-38850:-1:exon

position:38751:-1
position: 38751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38850:-1
position: 38850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:34805-34891:-1:exon

position:34805:-1
position: 34805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34891:-1
position: 34891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:24721-30108:-1:exon

position:30108:-1
position: 30108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ADAT1
product: adenosine deaminase, tRNA specific 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005052182.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(24721..30108,38751..38850,41179..41324,43796..44414,45945..46072,46837..46891,48582..48650,49314..49505,49925..49999))
location: region:24721-49999:-1
so has part: feature:49925-49999:-1:exon
so has part: feature:49314-49505:-1:exon
so has part: feature:48582-48650:-1:exon
so has part: feature:46837-46891:-1:exon
so has part: feature:45945-46072:-1:exon
so has part: feature:43796-44414:-1:exon
so has part: feature:41179-41324:-1:exon
so has part: feature:38751-38850:-1:exon
so has part: feature:24721-30108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49925-49999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49314-49505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48582-48650:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46837-46891:-1:exon

position:46837:-1
position: 46837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46891:-1
position: 46891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:45945-46072:-1:exon

position:45945:-1
position: 45945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46072:-1
position: 46072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:43796-44414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41179-41324:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38751-38850:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24721-30108:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ADAT1
product: adenosine deaminase, tRNA specific 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005052181.1
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(24721..30108,34805..34891,38751..38850,41179..41324,43796..44414,45945..46072,46837..46891,48582..48650,49314..49505,49925..49999))
location: region:24721-49999:-1
so has part: feature:49925-49999:-1:exon
so has part: feature:49314-49505:-1:exon
so has part: feature:48582-48650:-1:exon
so has part: feature:46837-46891:-1:exon
so has part: feature:45945-46072:-1:exon
so has part: feature:43796-44414:-1:exon
so has part: feature:41179-41324:-1:exon
so has part: feature:38751-38850:-1:exon
so has part: feature:34805-34891:-1:exon
so has part: feature:24721-30108:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49925-49999:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49314-49505:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48582-48650:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46837-46891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:45945-46072:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:43796-44414:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:41179-41324:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38751-38850:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34805-34891:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24721-30108:-1:exon

ADAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ADAT1
product: adenosine deaminase, tRNA specific 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005052183.2
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(24721..30108,34805..34891,38751..38850,41179..41324,43796..44414,45945..46072,46837..46891,48582..48646,49314..49381))
location: region:24721-49381:-1
so has part: feature:49314-49381:-1:exon
so has part: feature:48582-48646:-1:exon
so has part: feature:46837-46891:-1:exon
so has part: feature:45945-46072:-1:exon
so has part: feature:43796-44414:-1:exon
so has part: feature:41179-41324:-1:exon
so has part: feature:38751-38850:-1:exon
so has part: feature:34805-34891:-1:exon
so has part: feature:24721-30108:-1:exon

position:49381:-1
position: 49381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49314-49381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48582-48646:-1:exon

position:48646:-1
position: 48646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46837-46891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45945-46072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43796-44414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41179-41324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38751-38850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34805-34891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24721-30108:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X3
translation: MWSADEIAGLCYLHYRTRLPKQGKPDPNREWTSVAAIVKVESGAQIEALDSPGNLQVSKEVVAMGTGTKCIGRNKMRKTGGDASIFPISEPENQLSKPVTGGHAAGQSAKCRSNHNHLCPEDKRKSEKMASNHIIKRMKTDDGACFSIITEDLAVQHESVKREDNTHQKSCECSAEMQTANKDTGLVRPKVVDVHRTGAKCVPGELDDARIPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYSQEAMRRAVIERCQHVSSLPEGFLTQEVKLLQSELQFEHSHQAVQRVQTNSKTKIVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHKFQRLMTSISQEDLPDTLRMKTLKTYWDYKQAALNYQEAWRVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(29976..30108,34805..34891,38751..38850,41179..41324,43796..44414,48582..48650,49314..49482))
location: region:29976-49482:-1
so has part: feature:49314-49482:-1:exon
so has part: feature:48582-48650:-1:exon
so has part: feature:43796-44414:-1:exon
so has part: feature:41179-41324:-1:exon
so has part: feature:38751-38850:-1:exon
so has part: feature:34805-34891:-1:exon
so has part: feature:29976-30108:-1:exon

XP_016156633.1
type: Protein
SIO_000068: ncbiprotein

position:29976:-1
position: 29976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49482:-1
position: 49482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49314-49482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48582-48650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:43796-44414:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41179-41324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38751-38850:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:34805-34891:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:29976-30108:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X2
translation: MWSADEIAGLCYLHYRTRLPKQGKPDPNREWTSVAAIVKVESGAQIEALDSPGNLQVSKEVVAMGTGTKCIGRNKMRKTGDILNDSHAEVVAKRSFQRYLLHQLWLAASHQQCIFSPGTETGKWKLKPNIIFIFFSSHTPCGDASIFPISEPENQLSKPVTGGHAAGQSAKCRSNHNHLCPEDKRKSEKMASNHIIKRMKTDDGACFSIITEDLAVQHESVKREDNTHQKSCECSAEMQTANKDTGLVRPKVVDVHRTGAKCVPGELDDARIPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYSQEAMRRAVIERCQHVSSLPEGFLTQEVKLLQSELQFEHSHQAVQRVQTNSKTKIVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRMKTLKTYWDYKQAALNYQEAWRVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(29976..30108,38751..38850,41179..41324,43796..44414,45945..46072,46837..46891,48582..48650,49314..49482))
location: region:29976-49482:-1
so has part: feature:49314-49482:-1:exon
so has part: feature:48582-48650:-1:exon
so has part: feature:46837-46891:-1:exon
so has part: feature:45945-46072:-1:exon
so has part: feature:43796-44414:-1:exon
so has part: feature:41179-41324:-1:exon
so has part: feature:38751-38850:-1:exon
so has part: feature:29976-30108:-1:exon

XP_005052239.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49314-49482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48582-48650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46837-46891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45945-46072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43796-44414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41179-41324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38751-38850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29976-30108:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X1
translation: MWSADEIAGLCYLHYRTRLPKQGKPDPNREWTSVAAIVKVESGAQIEALDSPGNLQVSKEVVAMGTGTKCIGRNKMRKTGDILNDSHAEVVAKRSFQRYLLHQLWLAASHQQCIFSPGTETGKWKLKPNIIFIFFSSHTPCGDASIFPISEPENQLSKPVTGGHAAGQSAKCRSNHNHLCPEDKRKSEKMASNHIIKRMKTDDGACFSIITEDLAVQHESVKREDNTHQKSCECSAEMQTANKDTGLVRPKVVDVHRTGAKCVPGELDDARIPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYSQEAMRRAVIERCQHVSSLPEGFLTQEVKLLQSELQFEHSHQAVQRVQTNSKTKIVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHKFQRLMTSISQEDLPDTLRMKTLKTYWDYKQAALNYQEAWRVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(29976..30108,34805..34891,38751..38850,41179..41324,43796..44414,45945..46072,46837..46891,48582..48650,49314..49482))
location: region:29976-49482:-1
so has part: feature:49314-49482:-1:exon
so has part: feature:48582-48650:-1:exon
so has part: feature:46837-46891:-1:exon
so has part: feature:45945-46072:-1:exon
so has part: feature:43796-44414:-1:exon
so has part: feature:41179-41324:-1:exon
so has part: feature:38751-38850:-1:exon
so has part: feature:34805-34891:-1:exon
so has part: feature:29976-30108:-1:exon

XP_005052238.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49314-49482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48582-48650:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46837-46891:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45945-46072:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43796-44414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:41179-41324:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38751-38850:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34805-34891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:29976-30108:-1:exon

ADAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ADAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-specific adenosine deaminase 1 isoform X4
translation: MGTGTKCIGRNKMRKTGDILNDSHAEVVAKRSFQRYLLHQLWLAASHQQCIFSPGTETGKWKLKPNIIFIFFSSHTPCGDASIFPISEPENQLSKPVTGGHAAGQSAKCRSNHNHLCPEDKRKSEKMASNHIIKRMKTDDGACFSIITEDLAVQHESVKREDNTHQKSCECSAEMQTANKDTGLVRPKVVDVHRTGAKCVPGELDDARIPGLGYHCVGLLRVKPGRGDRTCSMSCSDKLARWNVLGCQGALLMHFLQYPVYLSAVIVGKCPYSQEAMRRAVIERCQHVSSLPEGFLTQEVKLLQSELQFEHSHQAVQRVQTNSKTKIVPCSAAISWSAVPEQPLDVTSDGFRQGTTKKGIGSHQSRSKICKVELFHKFQRLMTSISQEDLPDTLRMKTLKTYWDYKQAALNYQEAWRVLRSQALLGWVKNAKEYLHFT
SIO_010081: ADAT1
subclass of: SO_0000673
so part of: ADAT1
location: complement(join(29976..30108,34805..34891,38751..38850,41179..41324,43796..44414,45945..46072,46837..46891,48582..48630))
location: region:29976-48630:-1
so has part: feature:48582-48630:-1:exon
so has part: feature:46837-46891:-1:exon
so has part: feature:45945-46072:-1:exon
so has part: feature:43796-44414:-1:exon
so has part: feature:41179-41324:-1:exon
so has part: feature:38751-38850:-1:exon
so has part: feature:34805-34891:-1:exon
so has part: feature:29976-30108:-1:exon

XP_005052240.1
type: Protein
SIO_000068: ncbiprotein

position:48630:-1
position: 48630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48582-48630:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46837-46891:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:45945-46072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43796-44414:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:41179-41324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:38751-38850:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:34805-34891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:29976-30108:-1:exon

KARS
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: KARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(50092..58713)
location: region:50092-58713:-1
so has part: feature:50092-58713:-1:exon
subclass of: SO_0000010

101815934
type: Gene
SIO_000068: ncbigene

position:50092:-1
position: 50092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58713:-1
position: 58713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50092-58713:-1:exon

KARS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KARS
product: lysyl-tRNA synthetase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052193.1
SIO_010081: KARS
subclass of: SO_0000673
so part of: KARS
location: complement(join(50092..50278,50525..50668,52042..52168,52480..52565,53811..53896,54633..54806,54904..55066,55272..55391,56135..56260,56489..56675,56934..57027,57412..57577,57789..57933,58609..58713))
location: region:50092-58713:-1
so has part: feature:58609-58713:-1:exon
so has part: feature:57789-57933:-1:exon
so has part: feature:57412-57577:-1:exon
so has part: feature:56934-57027:-1:exon
so has part: feature:56489-56675:-1:exon
so has part: feature:56135-56260:-1:exon
so has part: feature:55272-55391:-1:exon
so has part: feature:54904-55066:-1:exon
so has part: feature:54633-54806:-1:exon
so has part: feature:53811-53896:-1:exon
so has part: feature:52480-52565:-1:exon
so has part: feature:52042-52168:-1:exon
so has part: feature:50525-50668:-1:exon
so has part: feature:50092-50278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58609-58713:-1:exon

position:58609:-1
position: 58609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57789-57933:-1:exon

position:57789:-1
position: 57789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57933:-1
position: 57933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57412-57577:-1:exon

position:57412:-1
position: 57412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57577:-1
position: 57577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:56934-57027:-1:exon

position:56934:-1
position: 56934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57027:-1
position: 57027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:56489-56675:-1:exon

position:56489:-1
position: 56489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56675:-1
position: 56675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:56135-56260:-1:exon

position:56135:-1
position: 56135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56260:-1
position: 56260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:55272-55391:-1:exon

position:55272:-1
position: 55272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55391:-1
position: 55391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:54904-55066:-1:exon

position:54904:-1
position: 54904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55066:-1
position: 55066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:54633-54806:-1:exon

position:54633:-1
position: 54633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54806:-1
position: 54806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:53811-53896:-1:exon

position:53811:-1
position: 53811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53896:-1
position: 53896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:52480-52565:-1:exon

position:52480:-1
position: 52480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52565:-1
position: 52565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:52042-52168:-1:exon

position:52042:-1
position: 52042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52168:-1
position: 52168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:50525-50668:-1:exon

position:50525:-1
position: 50525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50668:-1
position: 50668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:50092-50278:-1:exon

position:50278:-1
position: 50278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KARS
product: lysyl-tRNA synthetase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016301210.1
SIO_010081: KARS
subclass of: SO_0000673
so part of: KARS
location: complement(join(50092..50278,50525..50668,52042..52168,52480..52565,53811..53896,54633..54806,54904..55066,55272..55391,56135..56260,56489..56675,56934..57027,57412..57577,57789..57933,58412..58584))
location: region:50092-58584:-1
so has part: feature:58412-58584:-1:exon
so has part: feature:57789-57933:-1:exon
so has part: feature:57412-57577:-1:exon
so has part: feature:56934-57027:-1:exon
so has part: feature:56489-56675:-1:exon
so has part: feature:56135-56260:-1:exon
so has part: feature:55272-55391:-1:exon
so has part: feature:54904-55066:-1:exon
so has part: feature:54633-54806:-1:exon
so has part: feature:53811-53896:-1:exon
so has part: feature:52480-52565:-1:exon
so has part: feature:52042-52168:-1:exon
so has part: feature:50525-50668:-1:exon
so has part: feature:50092-50278:-1:exon

position:58584:-1
position: 58584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58412-58584:-1:exon

position:58412:-1
position: 58412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57789-57933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57412-57577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56934-57027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56489-56675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56135-56260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55272-55391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54904-55066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54633-54806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53811-53896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52480-52565:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:52042-52168:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50525-50668:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:50092-50278:-1:exon

KARS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X2
translation: MAAAEAAGECNAAEIESHLSKNELKRRLKAERKTAEKEAKQKEQSEKHSNKPSLTSEDNIGTDEESLDPNQYYKIRSHAVQQLKGSSEDPYPHKFHVDLSLSDFIDKYSHLQPGDHLTNITVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYLRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKWHRSLPGLTERFELFVMKKEVCNAYTELNDPVRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSSNIKEVLLFPAMKPEDSKKEAQPAEGTSV
SIO_010081: KARS
subclass of: SO_0000673
so part of: KARS
location: complement(join(50201..50278,50525..50668,52042..52168,52480..52565,53811..53896,54633..54806,54904..55066,55272..55391,56135..56260,56489..56675,56934..57027,57412..57577,57789..57933,58609..58673))
location: region:50201-58673:-1
so has part: feature:58609-58673:-1:exon
so has part: feature:57789-57933:-1:exon
so has part: feature:57412-57577:-1:exon
so has part: feature:56934-57027:-1:exon
so has part: feature:56489-56675:-1:exon
so has part: feature:56135-56260:-1:exon
so has part: feature:55272-55391:-1:exon
so has part: feature:54904-55066:-1:exon
so has part: feature:54633-54806:-1:exon
so has part: feature:53811-53896:-1:exon
so has part: feature:52480-52565:-1:exon
so has part: feature:52042-52168:-1:exon
so has part: feature:50525-50668:-1:exon
so has part: feature:50201-50278:-1:exon

XP_005052250.1
type: Protein
SIO_000068: ncbiprotein

position:50201:-1
position: 50201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58673:-1
position: 58673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58609-58673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57789-57933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57412-57577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56934-57027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56489-56675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56135-56260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55272-55391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54904-55066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54633-54806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53811-53896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52480-52565:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:52042-52168:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50525-50668:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:50201-50278:-1:exon

KARS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X1
translation: MLSPGAARLRSWVWRAAPALRWQQALHDQSSELKRRLKAERKTAEKEAKQKEQSEKHSNKPSLTSEDNIGTDEESLDPNQYYKIRSHAVQQLKGSSEDPYPHKFHVDLSLSDFIDKYSHLQPGDHLTNITVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYLRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHPQVMSPLAKWHRSLPGLTERFELFVMKKEVCNAYTELNDPVRQRQLFEDQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSSNIKEVLLFPAMKPEDSKKEAQPAEGTSV
SIO_010081: KARS
subclass of: SO_0000673
so part of: KARS
location: complement(join(50201..50278,50525..50668,52042..52168,52480..52565,53811..53896,54633..54806,54904..55066,55272..55391,56135..56260,56489..56675,56934..57027,57412..57577,57789..57933,58412..58503))
location: region:50201-58503:-1
so has part: feature:58412-58503:-1:exon
so has part: feature:57789-57933:-1:exon
so has part: feature:57412-57577:-1:exon
so has part: feature:56934-57027:-1:exon
so has part: feature:56489-56675:-1:exon
so has part: feature:56135-56260:-1:exon
so has part: feature:55272-55391:-1:exon
so has part: feature:54904-55066:-1:exon
so has part: feature:54633-54806:-1:exon
so has part: feature:53811-53896:-1:exon
so has part: feature:52480-52565:-1:exon
so has part: feature:52042-52168:-1:exon
so has part: feature:50525-50668:-1:exon
so has part: feature:50201-50278:-1:exon

XP_016156696.1
type: Protein
SIO_000068: ncbiprotein

position:58503:-1
position: 58503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58412-58503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57789-57933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57412-57577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56934-57027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56489-56675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56135-56260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55272-55391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54904-55066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54633-54806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53811-53896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52480-52565:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:52042-52168:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:50525-50668:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:50201-50278:-1:exon

KARS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KARS
product: lysyl-tRNA synthetase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016301211.1
SIO_010081: KARS
subclass of: SO_0000673
so part of: KARS
location: complement(join(52790..52890,53811..53896,54633..54806,54904..55066,55272..55391,56135..56260,56489..56675,56934..57027,57412..57577,57789..57933,58412..58588))
location: region:52790-58588:-1
so has part: feature:58412-58588:-1:exon
so has part: feature:57789-57933:-1:exon
so has part: feature:57412-57577:-1:exon
so has part: feature:56934-57027:-1:exon
so has part: feature:56489-56675:-1:exon
so has part: feature:56135-56260:-1:exon
so has part: feature:55272-55391:-1:exon
so has part: feature:54904-55066:-1:exon
so has part: feature:54633-54806:-1:exon
so has part: feature:53811-53896:-1:exon
so has part: feature:52790-52890:-1:exon

position:52790:-1
position: 52790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58588:-1
position: 58588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58412-58588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57789-57933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57412-57577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56934-57027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56489-56675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56135-56260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55272-55391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54904-55066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54633-54806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53811-53896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52790-52890:-1:exon

position:52890:-1
position: 52890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X3
translation: MLSPGAARLRSWVWRAAPALRWQQALHDQSSELKRRLKAERKTAEKEAKQKEQSEKHSNKPSLTSEDNIGTDEESLDPNQYYKIRSHAVQQLKGSSEDPYPHKFHVDLSLSDFIDKYSHLQPGDHLTNITVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYLRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPPPRTTARLLDKLVGEFLEVTCINPTLFCFCFPS
SIO_010081: KARS
subclass of: SO_0000673
so part of: KARS
location: complement(join(52822..52890,53811..53896,54633..54806,54904..55066,55272..55391,56135..56260,56489..56675,56934..57027,57412..57577,57789..57933,58412..58503))
location: region:52822-58503:-1
so has part: feature:58412-58503:-1:exon
so has part: feature:57789-57933:-1:exon
so has part: feature:57412-57577:-1:exon
so has part: feature:56934-57027:-1:exon
so has part: feature:56489-56675:-1:exon
so has part: feature:56135-56260:-1:exon
so has part: feature:55272-55391:-1:exon
so has part: feature:54904-55066:-1:exon
so has part: feature:54633-54806:-1:exon
so has part: feature:53811-53896:-1:exon
so has part: feature:52822-52890:-1:exon

XP_016156697.1
type: Protein
SIO_000068: ncbiprotein

position:52822:-1
position: 52822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58412-58503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57789-57933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57412-57577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56934-57027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56489-56675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56135-56260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55272-55391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54904-55066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54633-54806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53811-53896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:52822-52890:-1:exon

KARS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: KARS
product: lysyl-tRNA synthetase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016301212.1
SIO_010081: KARS
subclass of: SO_0000673
so part of: KARS
location: complement(join(53067..53150,53811..53896,54633..54806,54904..55066,55272..55391,56135..56260,56489..56675,56934..57027,57412..57577,57789..57933,58412..58588))
location: region:53067-58588:-1
so has part: feature:58412-58588:-1:exon
so has part: feature:57789-57933:-1:exon
so has part: feature:57412-57577:-1:exon
so has part: feature:56934-57027:-1:exon
so has part: feature:56489-56675:-1:exon
so has part: feature:56135-56260:-1:exon
so has part: feature:55272-55391:-1:exon
so has part: feature:54904-55066:-1:exon
so has part: feature:54633-54806:-1:exon
so has part: feature:53811-53896:-1:exon
so has part: feature:53067-53150:-1:exon

position:53067:-1
position: 53067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58412-58588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57789-57933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57412-57577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56934-57027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56489-56675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56135-56260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55272-55391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54904-55066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54633-54806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53811-53896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53067-53150:-1:exon

position:53150:-1
position: 53150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KARS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: KARS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine--tRNA ligase isoform X4
translation: MLSPGAARLRSWVWRAAPALRWQQALHDQSSELKRRLKAERKTAEKEAKQKEQSEKHSNKPSLTSEDNIGTDEESLDPNQYYKIRSHAVQQLKGSSEDPYPHKFHVDLSLSDFIDKYSHLQPGDHLTNITVRVAGRIHAKRAAGGKLIFYDLRGEGVKLQVMANSSLYKSEEEYLRVNSKLRRGDIIGVEGNPGKTRKGELSIIPYEITLLSPCLHMLPHLHFGLKDKETRYRQRYLDLILNDYVRQKFITRAKIITYLRSFLDELGFLEVETPMMNVIPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLMEITEKLLSGMVKHITGSYKITYHPDGQDGQAYEIDFTPPFRRISMVYDLEKVLGVKFPSTECFETEETRRFFDNLCVERNVECPPPRTTARLLDKLVGEFLEFTCINPTLFCFCFPS
SIO_010081: KARS
subclass of: SO_0000673
so part of: KARS
location: complement(join(53082..53150,53811..53896,54633..54806,54904..55066,55272..55391,56135..56260,56489..56675,56934..57027,57412..57577,57789..57933,58412..58503))
location: region:53082-58503:-1
so has part: feature:58412-58503:-1:exon
so has part: feature:57789-57933:-1:exon
so has part: feature:57412-57577:-1:exon
so has part: feature:56934-57027:-1:exon
so has part: feature:56489-56675:-1:exon
so has part: feature:56135-56260:-1:exon
so has part: feature:55272-55391:-1:exon
so has part: feature:54904-55066:-1:exon
so has part: feature:54633-54806:-1:exon
so has part: feature:53811-53896:-1:exon
so has part: feature:53082-53150:-1:exon

XP_016156698.1
type: Protein
SIO_000068: ncbiprotein

position:53082:-1
position: 53082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58412-58503:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57789-57933:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:57412-57577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:56934-57027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56489-56675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:56135-56260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55272-55391:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54904-55066:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54633-54806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53811-53896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53082-53150:-1:exon

TERF2IP
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TERF2IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 58895..61556
location: region:58895-61556:1
so has part: feature:58895-61556:1:exon
subclass of: SO_0000010

101816462
type: Gene
SIO_000068: ncbigene

position:58895:1
position: 58895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61556:1
position: 61556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58895-61556:1:exon

TERF2IP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TERF2IP
product: TERF2 interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301204.1
SIO_010081: TERF2IP
subclass of: SO_0000673
so part of: TERF2IP
location: join(58895..59177,59324..59519,59632..59708,60308..61556)
location: region:58895-61556:1
so has part: feature:58895-59177:1:exon
so has part: feature:59324-59519:1:exon
so has part: feature:59632-59708:1:exon
so has part: feature:60308-61556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58895-59177:1:exon

position:59177:1
position: 59177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:59324-59519:1:exon

position:59324:1
position: 59324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59519:1
position: 59519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59632-59708:1:exon

position:59632:1
position: 59632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59708:1
position: 59708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60308-61556:1:exon

position:60308:1
position: 60308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERF2IP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TERF2IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2-interacting protein 1
translation: MAGGQAGAARSRSLFLWDDGRPMRFYLRPGLAKLRLAPLVLAGGGRLCRVQEPGAVLLAQPGEAAPDGAVSTEYVTECVERNQRLPLEPFLLAARGRLAFTEAEDAALLRAVRGQGTVRVSGCALWMELERSGLTRHSWQAMRDRYLRHLRPRLWEPPRTEDPTQIKGLFAAANREFESTESESDSSDVAELSTKDGVGKSPEETASDLKTGPEDSAFPDIQLQRQKRPKSNCSSSSVVGQIVKTMEHFMEKFAVDLFTVTQAFLKNSGDVEATLYFLQTGQRSDGYPVWSREDDLELQKDDEHVRNKLIAKFGAENVAKRIAFRES
SIO_010081: TERF2IP
subclass of: SO_0000673
so part of: TERF2IP
location: join(58908..59177,59324..59519,59632..59708,60308..60748)
location: region:58908-60748:1
so has part: feature:58908-59177:1:exon
so has part: feature:59324-59519:1:exon
so has part: feature:59632-59708:1:exon
so has part: feature:60308-60748:1:exon

XP_016156690.1
type: Protein
SIO_000068: ncbiprotein

position:58908:1
position: 58908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60748:1
position: 60748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58908-59177:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59324-59519:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59632-59708:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60308-60748:1:exon

LOC101816656
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101816656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(61290..71700)
location: region:61290-71700:-1
so has part: feature:61290-71700:-1:exon
subclass of: SO_0000010

101816656
type: Gene
SIO_000068: ncbigene

position:61290:-1
position: 61290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71700:-1
position: 71700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61290-71700:-1:exon

LOC101816656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101816656
product: carbohydrate sulfotransferase 4-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016301203.1
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(join(61290..65722,66661..67017,70840..71700))
location: region:61290-71700:-1
so has part: feature:70840-71700:-1:exon
so has part: feature:66661-67017:-1:exon
so has part: feature:61290-65722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70840-71700:-1:exon

position:70840:-1
position: 70840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66661-67017:-1:exon

position:66661:-1
position: 66661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67017:-1
position: 67017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61290-65722:-1:exon

position:65722:-1
position: 65722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101816656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101816656
product: carbohydrate sulfotransferase 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016301202.1
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(join(61290..65722,66661..67017,69598..69611))
location: region:61290-69611:-1
so has part: feature:69598-69611:-1:exon
so has part: feature:66661-67017:-1:exon
so has part: feature:61290-65722:-1:exon

position:69611:-1
position: 69611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69598-69611:-1:exon

position:69598:-1
position: 69598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66661-67017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61290-65722:-1:exon

LOC101816656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101816656
product: carbohydrate sulfotransferase 4-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052198.2
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(join(61290..65722,66661..67017,69245..69489))
location: region:61290-69489:-1
so has part: feature:69245-69489:-1:exon
so has part: feature:66661-67017:-1:exon
so has part: feature:61290-65722:-1:exon

position:69489:-1
position: 69489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69245-69489:-1:exon

position:69245:-1
position: 69245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66661-67017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61290-65722:-1:exon

LOC101816656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101816656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4-like isoform X1
translation: MRSLAIMVKSRRVQVLLILVVLSFLLIHFLPCSNKAHMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRSDIITAGNCKTICGKYPFSKVEEACKTYSHVAIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVFRSRENTMADLKRDSNIVVGSQKTKGEMGPYSTMQVICKSHVEIYKAGSQAAPSFLKDRYLLVRYEDIVRDPLARAAQMYRFAELHFTPELQKWVHNITHGKGHGAQAFGIGSRDALRVSQAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVQSEEELKNMSLDLLFAQNSSKHPILKAEKLVSTFTL
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(join(64888..65722,66661..67017,69598..69602))
location: region:64888-69602:-1
so has part: feature:69598-69602:-1:exon
so has part: feature:66661-67017:-1:exon
so has part: feature:64888-65722:-1:exon

XP_016156688.1
type: Protein
SIO_000068: ncbiprotein

position:64888:-1
position: 64888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69602:-1
position: 69602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69598-69602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66661-67017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64888-65722:-1:exon

LOC101816656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101816656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4-like isoform X3
translation: MVKSRRVQVLLILVVLSFLLIHFLPCSNKAHMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRSDIITAGNCKTICGKYPFSKVEEACKTYSHVAIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVFRSRENTMADLKRDSNIVVGSQKTKGEMGPYSTMQVICKSHVEIYKAGSQAAPSFLKDRYLLVRYEDIVRDPLARAAQMYRFAELHFTPELQKWVHNITHGKGHGAQAFGIGSRDALRVSQAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVQSEEELKNMSLDLLFAQNSSKHPILKAEKLVSTFTL
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(join(64888..65722,66661..67004))
location: region:64888-67004:-1
so has part: feature:66661-67004:-1:exon
so has part: feature:64888-65722:-1:exon

XP_016156689.1
type: Protein
SIO_000068: ncbiprotein

position:67004:-1
position: 67004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66661-67004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64888-65722:-1:exon

LOC101816656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101816656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4-like isoform X3
translation: MVKSRRVQVLLILVVLSFLLIHFLPCSNKAHMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRSDIITAGNCKTICGKYPFSKVEEACKTYSHVAIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVFRSRENTMADLKRDSNIVVGSQKTKGEMGPYSTMQVICKSHVEIYKAGSQAAPSFLKDRYLLVRYEDIVRDPLARAAQMYRFAELHFTPELQKWVHNITHGKGHGAQAFGIGSRDALRVSQAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVQSEEELKNMSLDLLFAQNSSKHPILKAEKLVSTFTL
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(join(64888..65722,66661..67004))
location: region:64888-67004:-1
so has part: feature:66661-67004:-1:exon
so has part: feature:64888-65722:-1:exon

XP_005052255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:66661-67004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:64888-65722:-1:exon

LOC101816656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101816656
product: carbohydrate sulfotransferase 4-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052197.2
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(join(65749..67017,70840..70880))
location: region:65749-70880:-1
so has part: feature:70840-70880:-1:exon
so has part: feature:65749-67017:-1:exon

position:65749:-1
position: 65749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70880:-1
position: 70880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70840-70880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65749-67017:-1:exon

LOC101816656
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101816656
product: carbohydrate sulfotransferase 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052196.2
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(join(65749..67017,69598..69611))
location: region:65749-69611:-1
so has part: feature:69598-69611:-1:exon
so has part: feature:65749-67017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:69598-69611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65749-67017:-1:exon

LOC101816656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101816656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4-like isoform X2
translation: MRSLAIMVKSRRVQVLLILVVLSFLLIHFLPCSNKAHMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRSDIITAGNCKTICGKYPFSKVEEACKTYSHVAIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVFRSRENTMADLKRDSNIVVGSQKTKGEMGPYSTMQVICKSHVEIYKAGSQAAPSFLKDRYLLVRYEDIVRDPLARAAQMYRFAELHFTPELQKWVHNITHGKGHGAQAFGIGSRDALRVSQAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVQSEEELKNMSLDLLFAQNSSKHPILKAEKLVSTFTL
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(join(65826..67017,69598..69602))
location: region:65826-69602:-1
so has part: feature:69598-69602:-1:exon
so has part: feature:65826-67017:-1:exon

XP_005052253.1
type: Protein
SIO_000068: ncbiprotein

position:65826:-1
position: 65826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69598-69602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65826-67017:-1:exon

LOC101816656
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101816656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 4-like isoform X4
translation: MVKSRRVQVLLILVVLSFLLIHFLPCSNKAHMEEKPSPVHILILSSWRSGSSFTGQIFSQHPSVFYLMEPAWHVWVTMYQNSAKVLHMAVRDLVRSVFLCDMSVFDAYMSSQKKKSDLFQWETSRALCSPPACDSFSRSDIITAGNCKTICGKYPFSKVEEACKTYSHVAIKEVRFFDLKVLYPLLTDPSLNLKIIHLVRDPRAVFRSRENTMADLKRDSNIVVGSQKTKGEMGPYSTMQVICKSHVEIYKAGSQAAPSFLKDRYLLVRYEDIVRDPLARAAQMYRFAELHFTPELQKWVHNITHGKGHGAQAFGIGSRDALRVSQAWRKTLPFQKIEKVQNVCKDAMDLLGYRLVQSEEELKNMSLDLLFAQNSSKHPILKAEKLVSTFTL
SIO_010081: LOC101816656
subclass of: SO_0000673
so part of: LOC101816656
location: complement(65826..67004)
location: region:65826-67004:-1
so has part: feature:65826-67004:-1:exon

XP_005052254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:65826-67004:-1:exon

TAT
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(76536..86158)
location: region:76536-86158:-1
so has part: feature:76536-86158:-1:exon
subclass of: SO_0000010

101817231
type: Gene
SIO_000068: ncbigene

position:76536:-1
position: 76536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86158:-1
position: 86158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76536-86158:-1:exon

TAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TAT
product: tyrosine aminotransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052200.1
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(76536..77208,77945..78043,79587..79670,80113..80241,81134..81286,81636..81688,82197..82335,82484..82642,83023..83090,83913..84017,84197..84439,86054..86158))
location: region:76536-86158:-1
so has part: feature:86054-86158:-1:exon
so has part: feature:84197-84439:-1:exon
so has part: feature:83913-84017:-1:exon
so has part: feature:83023-83090:-1:exon
so has part: feature:82484-82642:-1:exon
so has part: feature:82197-82335:-1:exon
so has part: feature:81636-81688:-1:exon
so has part: feature:81134-81286:-1:exon
so has part: feature:80113-80241:-1:exon
so has part: feature:79587-79670:-1:exon
so has part: feature:77945-78043:-1:exon
so has part: feature:76536-77208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86054-86158:-1:exon

position:86054:-1
position: 86054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84197-84439:-1:exon

position:84197:-1
position: 84197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84439:-1
position: 84439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:83913-84017:-1:exon

position:83913:-1
position: 83913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84017:-1
position: 84017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:83023-83090:-1:exon

position:83023:-1
position: 83023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:83090:-1
position: 83090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:82484-82642:-1:exon

position:82484:-1
position: 82484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82642:-1
position: 82642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82197-82335:-1:exon

position:82197:-1
position: 82197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82335:-1
position: 82335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:81636-81688:-1:exon

position:81636:-1
position: 81636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81688:-1
position: 81688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:81134-81286:-1:exon

position:81134:-1
position: 81134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81286:-1
position: 81286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:80113-80241:-1:exon

position:80113:-1
position: 80113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80241:-1
position: 80241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:79587-79670:-1:exon

position:79587:-1
position: 79587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79670:-1
position: 79670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:77945-78043:-1:exon

position:77945:-1
position: 77945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78043:-1
position: 78043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:76536-77208:-1:exon

position:77208:-1
position: 77208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine aminotransferase
translation: MDSYLIQVNGHGDHAPVLDVHLKNTGNTISPGKVKGRKPRWAVRASEMSKKTFNPVRAIVDSMKVEPNPKKAMISLSLGDPTVFGNLPTNDEVTRAMKEALDSGQYNGYAPSVGYQSCREAVAAYYTCPEAPLKAQDVILTSGCSQAIELALAVLANPGQNILVPRPGFSLYKTLALSMGIEVKLYNLLPEKAWEIDLEHLESLVDEKTACLIVNNPSNPCGSVFSKSHLQEILAVASRQCVPILADEIYGDMVFADCKYEPIATLSTNVPILSCGGLAKRWLVPGWRMGWILIHDRRDIFGNEIRDGLIRLSQRILGPCTIVQGALEHILHRTPPEFYHNTLSILKSNADLCYAALSAIPGLHPVRPAGAMYLMVEIEMEHFPEFENDVEFTERLISEQSVFCLPATCFEYPNFFRVVITVPEEMILEACSRIQEFCEMHYQGAEGAQDLECDK
SIO_010081: TAT
subclass of: SO_0000673
so part of: TAT
location: complement(join(77065..77208,77945..78043,79587..79670,80113..80241,81134..81286,81636..81688,82197..82335,82484..82642,83023..83090,83913..84017,84197..84431))
location: region:77065-84431:-1
so has part: feature:84197-84431:-1:exon
so has part: feature:83913-84017:-1:exon
so has part: feature:83023-83090:-1:exon
so has part: feature:82484-82642:-1:exon
so has part: feature:82197-82335:-1:exon
so has part: feature:81636-81688:-1:exon
so has part: feature:81134-81286:-1:exon
so has part: feature:80113-80241:-1:exon
so has part: feature:79587-79670:-1:exon
so has part: feature:77945-78043:-1:exon
so has part: feature:77065-77208:-1:exon

XP_005052257.1
type: Protein
SIO_000068: ncbiprotein

position:77065:-1
position: 77065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84431:-1
position: 84431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84197-84431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83913-84017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:83023-83090:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82484-82642:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82197-82335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:81636-81688:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:81134-81286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80113-80241:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79587-79670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:77945-78043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:77065-77208:-1:exon

MARVELD3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 94969..99875
location: region:94969-99875:1
so has part: feature:94969-99875:1:exon
subclass of: SO_0000010

101813049
type: Gene
SIO_000068: ncbigene

position:94969:1
position: 94969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99875:1
position: 99875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94969-99875:1:exon

MARVELD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MARVELD3
product: MARVEL domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005052273.2
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: join(94969..95152,95266..99875)
location: region:94969-99875:1
so has part: feature:94969-95152:1:exon
so has part: feature:95266-99875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94969-95152:1:exon

position:95152:1
position: 95152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95266-99875:1:exon

position:95266:1
position: 95266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MARVELD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MARVELD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MARVEL domain-containing protein 3
translation: MVEVLLAALILVCSSVSCGSAGGYTGLPALGGIYYYQYGGAYSGFSGAEGEQAQQLDQRFYLLKLPIARAAMAVAGCLLVFPCVLILVGVLRVPWHFPAWLLIECTLYIVIAVGTVPALYYFLHSLISVYNSSVCKEREQLYQSKGYQGFWCSLHGAEIAAGLLGCLAAMAYLLSAGLAVRDYRTGHE
SIO_010081: MARVELD3
subclass of: SO_0000673
so part of: MARVELD3
location: 95277..95843
location: region:95277-95843:1
so has part: feature:95277-95843:1:exon

XP_005052330.2
type: Protein
SIO_000068: ncbiprotein

position:95277:1
position: 95277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95843:1
position: 95843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95277-95843:1:exon

PHLPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(97295..129384)
location: region:97295-129384:-1
so has part: feature:97295-129384:-1:exon
subclass of: SO_0000010

101813247
type: Gene
SIO_000068: ncbigene

position:97295:-1
position: 97295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129384:-1
position: 129384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97295-129384:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005052274.2
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(97295..102658,103999..104230,104360..104548,105003..105113,105500..105630,106829..106991,107480..107680,108356..108511,109795..109890,110434..110494,110989..111191,111917..112147,113105..113251,117236..117390,118453..118578,119002..119192,124602..124735,128850..129094,129331..129384))
location: region:97295-129384:-1
so has part: feature:129331-129384:-1:exon
so has part: feature:128850-129094:-1:exon
so has part: feature:124602-124735:-1:exon
so has part: feature:119002-119192:-1:exon
so has part: feature:118453-118578:-1:exon
so has part: feature:117236-117390:-1:exon
so has part: feature:113105-113251:-1:exon
so has part: feature:111917-112147:-1:exon
so has part: feature:110989-111191:-1:exon
so has part: feature:110434-110494:-1:exon
so has part: feature:109795-109890:-1:exon
so has part: feature:108356-108511:-1:exon
so has part: feature:107480-107680:-1:exon
so has part: feature:106829-106991:-1:exon
so has part: feature:105500-105630:-1:exon
so has part: feature:105003-105113:-1:exon
so has part: feature:104360-104548:-1:exon
so has part: feature:103999-104230:-1:exon
so has part: feature:97295-102658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129331-129384:-1:exon

position:129331:-1
position: 129331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128850-129094:-1:exon

position:128850:-1
position: 128850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129094:-1
position: 129094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:124602-124735:-1:exon

position:124602:-1
position: 124602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124735:-1
position: 124735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:119002-119192:-1:exon

position:119002:-1
position: 119002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119192:-1
position: 119192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:118453-118578:-1:exon

position:118453:-1
position: 118453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118578:-1
position: 118578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:117236-117390:-1:exon

position:117236:-1
position: 117236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117390:-1
position: 117390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:113105-113251:-1:exon

position:113105:-1
position: 113105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113251:-1
position: 113251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:111917-112147:-1:exon

position:111917:-1
position: 111917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112147:-1
position: 112147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:110989-111191:-1:exon

position:110989:-1
position: 110989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111191:-1
position: 111191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:110434-110494:-1:exon

position:110434:-1
position: 110434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110494:-1
position: 110494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:109795-109890:-1:exon

position:109795:-1
position: 109795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109890:-1
position: 109890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:108356-108511:-1:exon

position:108356:-1
position: 108356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108511:-1
position: 108511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:107480-107680:-1:exon

position:107480:-1
position: 107480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107680:-1
position: 107680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:106829-106991:-1:exon

position:106829:-1
position: 106829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106991:-1
position: 106991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:105500-105630:-1:exon

position:105500:-1
position: 105500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105630:-1
position: 105630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:105003-105113:-1:exon

position:105003:-1
position: 105003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105113:-1
position: 105113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:104360-104548:-1:exon

position:104360:-1
position: 104360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104548:-1
position: 104548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:103999-104230:-1:exon

position:103999:-1
position: 103999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104230:-1
position: 104230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:97295-102658:-1:exon

position:102658:-1
position: 102658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016301170.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(97295..102658,103999..104230,104360..104548,105003..105113,105500..105630,106829..106991,107480..107680,108356..108511,109795..109890,110434..110494,110989..111191,111917..112147,113105..113212,117236..117390,118453..118578,119002..119192,124602..124732))
location: region:97295-124732:-1
so has part: feature:124602-124732:-1:exon
so has part: feature:119002-119192:-1:exon
so has part: feature:118453-118578:-1:exon
so has part: feature:117236-117390:-1:exon
so has part: feature:113105-113212:-1:exon
so has part: feature:111917-112147:-1:exon
so has part: feature:110989-111191:-1:exon
so has part: feature:110434-110494:-1:exon
so has part: feature:109795-109890:-1:exon
so has part: feature:108356-108511:-1:exon
so has part: feature:107480-107680:-1:exon
so has part: feature:106829-106991:-1:exon
so has part: feature:105500-105630:-1:exon
so has part: feature:105003-105113:-1:exon
so has part: feature:104360-104548:-1:exon
so has part: feature:103999-104230:-1:exon
so has part: feature:97295-102658:-1:exon

position:124732:-1
position: 124732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124602-124732:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119002-119192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118453-118578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117236-117390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113105-113212:-1:exon

position:113212:-1
position: 113212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:111917-112147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110989-111191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110434-110494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109795-109890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108356-108511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107480-107680:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106829-106991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:105500-105630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:105003-105113:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:104360-104548:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103999-104230:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:97295-102658:-1:exon

PHLPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PHLPP2
product: PH domain and leucine rich repeat protein phosphatase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016301171.1
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(97295..102658,103999..104230,104360..104548,105500..105630,106829..106991,107480..107680,108356..108511,109795..109890,110434..110494,110989..111191,111917..112147,113105..113251,117236..117390,118453..118578,119002..119192,124602..124732))
location: region:97295-124732:-1
so has part: feature:124602-124732:-1:exon
so has part: feature:119002-119192:-1:exon
so has part: feature:118453-118578:-1:exon
so has part: feature:117236-117390:-1:exon
so has part: feature:113105-113251:-1:exon
so has part: feature:111917-112147:-1:exon
so has part: feature:110989-111191:-1:exon
so has part: feature:110434-110494:-1:exon
so has part: feature:109795-109890:-1:exon
so has part: feature:108356-108511:-1:exon
so has part: feature:107480-107680:-1:exon
so has part: feature:106829-106991:-1:exon
so has part: feature:105500-105630:-1:exon
so has part: feature:104360-104548:-1:exon
so has part: feature:103999-104230:-1:exon
so has part: feature:97295-102658:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:124602-124732:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119002-119192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118453-118578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117236-117390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113105-113251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111917-112147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110989-111191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110434-110494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109795-109890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108356-108511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107480-107680:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106829-106991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:105500-105630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104360-104548:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103999-104230:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:97295-102658:-1:exon

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X1
translation: MQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGVYSVRKGKTQLHKWAERSVTLCGTCLIVSSVKDSHAGKMHILPLIGGKVEELKRRQHTLAFTSAGAQAQTYHVSFGTPAECQRWHRQAATIVSMRFSVVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMRTSGAGSLDSLCRLGEFPVSLCEISTLTELNISCNGLHYLPSQIGKLLNLQTFWLDGNFLTSLPEEIGNLQQLSCLGLSFNNFCELPAICEKLVTLDKLALAGNLLETLDLTVLNRMSHIKSVDLRLNNLKRAAADTLEGNKSVAYMDLRDNQMTDLDLSSLVSLEQLHCERNKLRELTLSGFSLRALYANSNCLTAVNIYPVPGLLTCLELAHNQLQCVPDWACEAKKLEVLDLSYNLLLELPSRILRSLSLRKLMVGHNRLQSLPPLLEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLVGHPNLRILHLANNHLLTFPASKLSKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNELTEILIPEALPGALQELDLSGNANLVLEHKTLDIFSHITTLKIDAKPSLTADSALTSAFWSHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGMFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRNEVADPASNFSLTVANVGTCQAVLCRSGKALPLSKVFSLEQCSEEASRVKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVNSIPLTVQDELLLLGNKALWEHLSYAEAVSAVRHLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNIGEDSCTCEMHGLTLTGPGGFSSTATKPATPSCSSGIASEFNSELSASEVSSEVGSTASDEHSAVGLDGSLLPRQERRCSLHPVPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLELEHPAAEYSSSALGPENDSRLVLIIRRQNSVNSNTAQRGVREKCELQKSLSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQIKQHQEDRTDQELKEHAVPLPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(101522..102658,103999..104230,104360..104548,105003..105113,105500..105630,106829..106991,107480..107680,108356..108511,109795..109890,110434..110494,110989..111191,111917..112147,113105..113212,117236..117390,118453..118578,119002..119192,124602..124656))
location: region:101522-124656:-1
so has part: feature:124602-124656:-1:exon
so has part: feature:119002-119192:-1:exon
so has part: feature:118453-118578:-1:exon
so has part: feature:117236-117390:-1:exon
so has part: feature:113105-113212:-1:exon
so has part: feature:111917-112147:-1:exon
so has part: feature:110989-111191:-1:exon
so has part: feature:110434-110494:-1:exon
so has part: feature:109795-109890:-1:exon
so has part: feature:108356-108511:-1:exon
so has part: feature:107480-107680:-1:exon
so has part: feature:106829-106991:-1:exon
so has part: feature:105500-105630:-1:exon
so has part: feature:105003-105113:-1:exon
so has part: feature:104360-104548:-1:exon
so has part: feature:103999-104230:-1:exon
so has part: feature:101522-102658:-1:exon

XP_016156656.1
type: Protein
SIO_000068: ncbiprotein

position:101522:-1
position: 101522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124656:-1
position: 124656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124602-124656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119002-119192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118453-118578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117236-117390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113105-113212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111917-112147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110989-111191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110434-110494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109795-109890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108356-108511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107480-107680:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106829-106991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:105500-105630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:105003-105113:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:104360-104548:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103999-104230:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101522-102658:-1:exon

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X2
translation: MQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGVYSVRKGKTQLHKWAERSVTLCGTCLIVSSVKDSHAGKMHILPLIGGKVEELKRRQHTLAFTSAGAQAQTYHVSFGTPAECQRWHRQAATIVSMRFSVVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMRTSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLHYLPSQIGKLLNLQTFWLDGNFLTSLPEEIGNLQQLSCLGLSFNNFCELPAICEKLVTLDKLALAGNLLETLDLTVLNRMSHIKSVDLRLNNLKRAAADTLEGNKSVAYMDLRDNQMTDLDLSSLVSLEQLHCERNKLRELTLSGFSLRALYANSNCLTAVNIYPVPGLLTCLELAHNQLQCVPDWACEAKKLEVLDLSYNLLLELPSRILRSLSLRKLMVGHNRLQSLPPLLEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLVGHPNLRILHLANNHLLTFPASKLSKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNELTEILIPEALPGALQELDLSGNANLVLEHKTLDIFRLCVSSLALGSFAEGVEAVYGMFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRNEVADPASNFSLTVANVGTCQAVLCRSGKALPLSKVFSLEQCSEEASRVKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVNSIPLTVQDELLLLGNKALWEHLSYAEAVSAVRHLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNIGEDSCTCEMHGLTLTGPGGFSSTATKPATPSCSSGIASEFNSELSASEVSSEVGSTASDEHSAVGLDGSLLPRQERRCSLHPVPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLELEHPAAEYSSSALGPENDSRLVLIIRRQNSVNSNTAQRGVREKCELQKSLSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQIKQHQEDRTDQELKEHAVPLPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(101522..102658,103999..104230,104360..104548,105500..105630,106829..106991,107480..107680,108356..108511,109795..109890,110434..110494,110989..111191,111917..112147,113105..113251,117236..117390,118453..118578,119002..119192,124602..124656))
location: region:101522-124656:-1
so has part: feature:124602-124656:-1:exon
so has part: feature:119002-119192:-1:exon
so has part: feature:118453-118578:-1:exon
so has part: feature:117236-117390:-1:exon
so has part: feature:113105-113251:-1:exon
so has part: feature:111917-112147:-1:exon
so has part: feature:110989-111191:-1:exon
so has part: feature:110434-110494:-1:exon
so has part: feature:109795-109890:-1:exon
so has part: feature:108356-108511:-1:exon
so has part: feature:107480-107680:-1:exon
so has part: feature:106829-106991:-1:exon
so has part: feature:105500-105630:-1:exon
so has part: feature:104360-104548:-1:exon
so has part: feature:103999-104230:-1:exon
so has part: feature:101522-102658:-1:exon

XP_016156657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124602-124656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119002-119192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118453-118578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117236-117390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113105-113251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111917-112147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110989-111191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110434-110494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109795-109890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108356-108511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107480-107680:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106829-106991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:105500-105630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104360-104548:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103999-104230:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:101522-102658:-1:exon

PHLPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PHLPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH domain leucine-rich repeat-containing protein phosphatase 2 isoform X3
translation: MQEEAANSDLSCMIRFYSEKPCQVEQLDRILLSGVYSVRKGKTQLHKWAERSVTLCGTCLIVSSVKDSHAGKMHILPLIGGKVEELKRRQHTLAFTSAGAQAQTYHVSFGTPAECQRWHRQAATIVSMRFSVVDLSCYSLEEVPEHLFYSQDITYLNLRHNFMRTSGAGSLDSLCRFSQLKSLNLSHNRLGEFPVSLCEISTLTELNISCNGLHYLPSQIGKLLNLQTFWLDGNFLTSLPEEIGNLQQLSCLGLSFNNFCELPAICEKLVTLDKLALAGNLLETLDLTVLNRMSHIKSVDLRLNNLKRAAADTLEGNKSVAYMDLRDNQMTDLDLSSLVSLEQLHCERNKLRELTLSGFSLRALYANSNCLTAVNIYPVPGLLTCLELAHNQLQCVPDWACEAKKLEVLDLSYNLLLELPSRILRSLSLRKLMVGHNRLQSLPPLLEHIPLEVLDLQHNLLTKLPETLFVKALNLRYLNASANSLESLPSACTGEESLSMLQLLYLTNNNLTDQCIPVLVGHPNLRILHLANNHLLTFPASKLSKLEHLEELNLSGNKLKTIPTTVANCKLLHTLIAHSNEISIFPEILHLPRIQFVDLSCNELTEILIPEALPGALQELDLSGNANLVLEHKTLDIFSHITTLKIDAKPSLTADSALTSAFWSHGVAEMAGQRNKLCVSSLALGSFAEGVEAVYGMFDGDKNEELPRLLQCTMADVLLEEVQQSDTMFMSNTFLVSHRKLGMAGQKLGSSAVLCYIRNEVADPASNFSLTVANVGTCQAVLCRSGKALPLSKVFSLEQCSEEASRVKEQKAIITEDNKVNGVTCCTRMLGCTYLHPWILPKPHVNSIPLTVQDELLLLGNKALWEHLSYAEAVSAVRHLHDPLAAAKKLCTLAQSYGCQDNVGAMVVCLNIGEDSCTCEMHGLTLTGPGGFSSTATKPATPSCSSGIASEFNSELSASEVSSEVGSTASDEHSAVGLDGSLLPRQERRCSLHPVPPSSIFQRQPSSATFSSNQSDNGLDSDDEQPVEGVMTNGSKVEVEVDIHCCKGKGLELEHPAAEYSSSALGPENDSRLVLIIRRQNSVNSNTAQRGVREKCELQKSLSTCCLYGKKLSNGSIVPLEESLNLIEVATEAPKKKTGYFAAPSQMEPEDQFVVPPDLEEEVKEQIKQHQEDRTDQELKEHAVPLPEEFDTAL
SIO_010081: PHLPP2
subclass of: SO_0000673
so part of: PHLPP2
location: complement(join(101522..102658,103999..104230,104360..104548,105003..105113,105500..105630,106829..106991,107480..107680,108356..108511,109795..109890,110434..110494,110989..111191,111917..112147,113105..113251,117236..117390,118453..118578,119002..119192,124602..124656))
location: region:101522-124656:-1
so has part: feature:124602-124656:-1:exon
so has part: feature:119002-119192:-1:exon
so has part: feature:118453-118578:-1:exon
so has part: feature:117236-117390:-1:exon
so has part: feature:113105-113251:-1:exon
so has part: feature:111917-112147:-1:exon
so has part: feature:110989-111191:-1:exon
so has part: feature:110434-110494:-1:exon
so has part: feature:109795-109890:-1:exon
so has part: feature:108356-108511:-1:exon
so has part: feature:107480-107680:-1:exon
so has part: feature:106829-106991:-1:exon
so has part: feature:105500-105630:-1:exon
so has part: feature:105003-105113:-1:exon
so has part: feature:104360-104548:-1:exon
so has part: feature:103999-104230:-1:exon
so has part: feature:101522-102658:-1:exon

XP_005052331.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:124602-124656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:119002-119192:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118453-118578:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:117236-117390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113105-113251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:111917-112147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:110989-111191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:110434-110494:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:109795-109890:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:108356-108511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:107480-107680:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106829-106991:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:105500-105630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:105003-105113:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:104360-104548:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103999-104230:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101522-102658:-1:exon

AP1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(132124..169186)
location: region:132124-169186:-1
so has part: feature:132124-169186:-1:exon
subclass of: SO_0000010

101817419
type: Gene
SIO_000068: ncbigene

position:132124:-1
position: 132124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169186:-1
position: 169186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:132124-169186:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AP1G1
product: adaptor related protein complex 1 gamma 1 subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016301161.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(132124..134956,137033..137131,138126..138286,139069..139192,139761..139902,140383..140487,141055..141182,141681..141770,142076..142198,143262..143316,143613..143753,146825..146938,147716..147771,148183..148281,148529..148609,149070..149165,150232..150240,151326..151402,152327..152423,153615..153756,155884..156008,160127..160330,169003..169186))
location: region:132124-169186:-1
so has part: feature:169003-169186:-1:exon
so has part: feature:160127-160330:-1:exon
so has part: feature:155884-156008:-1:exon
so has part: feature:153615-153756:-1:exon
so has part: feature:152327-152423:-1:exon
so has part: feature:151326-151402:-1:exon
so has part: feature:150232-150240:-1:exon
so has part: feature:149070-149165:-1:exon
so has part: feature:148529-148609:-1:exon
so has part: feature:148183-148281:-1:exon
so has part: feature:147716-147771:-1:exon
so has part: feature:146825-146938:-1:exon
so has part: feature:143613-143753:-1:exon
so has part: feature:143262-143316:-1:exon
so has part: feature:142076-142198:-1:exon
so has part: feature:141681-141770:-1:exon
so has part: feature:141055-141182:-1:exon
so has part: feature:140383-140487:-1:exon
so has part: feature:139761-139902:-1:exon
so has part: feature:139069-139192:-1:exon
so has part: feature:138126-138286:-1:exon
so has part: feature:137033-137131:-1:exon
so has part: feature:132124-134956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169003-169186:-1:exon

position:169003:-1
position: 169003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160127-160330:-1:exon

position:160127:-1
position: 160127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160330:-1
position: 160330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155884-156008:-1:exon

position:155884:-1
position: 155884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156008:-1
position: 156008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153615-153756:-1:exon

position:153615:-1
position: 153615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153756:-1
position: 153756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:152327-152423:-1:exon

position:152327:-1
position: 152327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152423:-1
position: 152423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:151326-151402:-1:exon

position:151326:-1
position: 151326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151402:-1
position: 151402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:150232-150240:-1:exon

position:150232:-1
position: 150232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150240:-1
position: 150240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:149070-149165:-1:exon

position:149070:-1
position: 149070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149165:-1
position: 149165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:148529-148609:-1:exon

position:148529:-1
position: 148529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148609:-1
position: 148609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:148183-148281:-1:exon

position:148183:-1
position: 148183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148281:-1
position: 148281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:147716-147771:-1:exon

position:147716:-1
position: 147716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147771:-1
position: 147771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:146825-146938:-1:exon

position:146825:-1
position: 146825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146938:-1
position: 146938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:143613-143753:-1:exon

position:143613:-1
position: 143613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143753:-1
position: 143753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:143262-143316:-1:exon

position:143262:-1
position: 143262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143316:-1
position: 143316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:142076-142198:-1:exon

position:142076:-1
position: 142076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142198:-1
position: 142198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:141681-141770:-1:exon

position:141681:-1
position: 141681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141770:-1
position: 141770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:141055-141182:-1:exon

position:141055:-1
position: 141055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141182:-1
position: 141182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:140383-140487:-1:exon

position:140383:-1
position: 140383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140487:-1
position: 140487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:139761-139902:-1:exon

position:139761:-1
position: 139761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139902:-1
position: 139902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:139069-139192:-1:exon

position:139069:-1
position: 139069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139192:-1
position: 139192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:138126-138286:-1:exon

position:138126:-1
position: 138126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138286:-1
position: 138286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:137033-137131:-1:exon

position:137033:-1
position: 137033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137131:-1
position: 137131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:132124-134956:-1:exon

position:134956:-1
position: 134956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AP1G1
product: adaptor related protein complex 1 gamma 1 subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016301160.1
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(132124..134956,137033..137131,138126..138286,138542..138634,139069..139192,139761..139902,140383..140487,141055..141182,141681..141770,142076..142198,143262..143316,143613..143753,146825..146938,147716..147771,148183..148281,148529..148609,149070..149165,151326..151402,152327..152423,153615..153756,155884..156008,160127..160330,169003..169184))
location: region:132124-169184:-1
so has part: feature:169003-169184:-1:exon
so has part: feature:160127-160330:-1:exon
so has part: feature:155884-156008:-1:exon
so has part: feature:153615-153756:-1:exon
so has part: feature:152327-152423:-1:exon
so has part: feature:151326-151402:-1:exon
so has part: feature:149070-149165:-1:exon
so has part: feature:148529-148609:-1:exon
so has part: feature:148183-148281:-1:exon
so has part: feature:147716-147771:-1:exon
so has part: feature:146825-146938:-1:exon
so has part: feature:143613-143753:-1:exon
so has part: feature:143262-143316:-1:exon
so has part: feature:142076-142198:-1:exon
so has part: feature:141681-141770:-1:exon
so has part: feature:141055-141182:-1:exon
so has part: feature:140383-140487:-1:exon
so has part: feature:139761-139902:-1:exon
so has part: feature:139069-139192:-1:exon
so has part: feature:138542-138634:-1:exon
so has part: feature:138126-138286:-1:exon
so has part: feature:137033-137131:-1:exon
so has part: feature:132124-134956:-1:exon

position:169184:-1
position: 169184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169003-169184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160127-160330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155884-156008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153615-153756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152327-152423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151326-151402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149070-149165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148529-148609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148183-148281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147716-147771:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:146825-146938:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143613-143753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143262-143316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:142076-142198:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:141681-141770:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:141055-141182:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:140383-140487:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:139761-139902:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:139069-139192:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138542-138634:-1:exon

position:138542:-1
position: 138542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138634:-1
position: 138634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:138126-138286:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:137033-137131:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:132124-134956:-1:exon

AP1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: AP1G1
product: adaptor related protein complex 1 gamma 1 subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052203.2
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(132124..134956,137033..137131,138126..138286,138542..138634,139069..139192,139761..139902,140383..140487,141055..141182,141681..141770,142076..142198,143262..143316,143613..143753,146825..146938,147716..147771,148183..148281,148529..148609,149070..149165,150232..150240,151326..151402,152327..152423,153615..153756,155884..156008,160127..160330,169003..169184))
location: region:132124-169184:-1
so has part: feature:169003-169184:-1:exon
so has part: feature:160127-160330:-1:exon
so has part: feature:155884-156008:-1:exon
so has part: feature:153615-153756:-1:exon
so has part: feature:152327-152423:-1:exon
so has part: feature:151326-151402:-1:exon
so has part: feature:150232-150240:-1:exon
so has part: feature:149070-149165:-1:exon
so has part: feature:148529-148609:-1:exon
so has part: feature:148183-148281:-1:exon
so has part: feature:147716-147771:-1:exon
so has part: feature:146825-146938:-1:exon
so has part: feature:143613-143753:-1:exon
so has part: feature:143262-143316:-1:exon
so has part: feature:142076-142198:-1:exon
so has part: feature:141681-141770:-1:exon
so has part: feature:141055-141182:-1:exon
so has part: feature:140383-140487:-1:exon
so has part: feature:139761-139902:-1:exon
so has part: feature:139069-139192:-1:exon
so has part: feature:138542-138634:-1:exon
so has part: feature:138126-138286:-1:exon
so has part: feature:137033-137131:-1:exon
so has part: feature:132124-134956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169003-169184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160127-160330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155884-156008:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153615-153756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:152327-152423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:151326-151402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:150232-150240:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:149070-149165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148529-148609:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148183-148281:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:147716-147771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:146825-146938:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143613-143753:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:143262-143316:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:142076-142198:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:141681-141770:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:141055-141182:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:140383-140487:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:139761-139902:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:139069-139192:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:138542-138634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:138126-138286:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:137033-137131:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:132124-134956:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X2
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPAEIVQTNGETETAVLETKPPPSGLQPANQANDLLDLLGGSDITPVIPTAPPSKPASGGELLDLLGDLNLTGSPVAAPAPQIAQPPFLLDGLTQPLFNDIAAGIPSITAYNKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(134855..134956,137033..137131,138126..138286,138542..138634,139069..139192,139761..139902,140383..140487,141055..141182,141681..141770,142076..142198,143262..143316,143613..143753,146825..146938,147716..147771,148183..148281,148529..148609,149070..149165,151326..151402,152327..152423,153615..153756,155884..156008,160127..160327))
location: region:134855-160327:-1
so has part: feature:160127-160327:-1:exon
so has part: feature:155884-156008:-1:exon
so has part: feature:153615-153756:-1:exon
so has part: feature:152327-152423:-1:exon
so has part: feature:151326-151402:-1:exon
so has part: feature:149070-149165:-1:exon
so has part: feature:148529-148609:-1:exon
so has part: feature:148183-148281:-1:exon
so has part: feature:147716-147771:-1:exon
so has part: feature:146825-146938:-1:exon
so has part: feature:143613-143753:-1:exon
so has part: feature:143262-143316:-1:exon
so has part: feature:142076-142198:-1:exon
so has part: feature:141681-141770:-1:exon
so has part: feature:141055-141182:-1:exon
so has part: feature:140383-140487:-1:exon
so has part: feature:139761-139902:-1:exon
so has part: feature:139069-139192:-1:exon
so has part: feature:138542-138634:-1:exon
so has part: feature:138126-138286:-1:exon
so has part: feature:137033-137131:-1:exon
so has part: feature:134855-134956:-1:exon

XP_016156646.1
type: Protein
SIO_000068: ncbiprotein

position:134855:-1
position: 134855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160327:-1
position: 160327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160127-160327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155884-156008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153615-153756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152327-152423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151326-151402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:149070-149165:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:148529-148609:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148183-148281:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147716-147771:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:146825-146938:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:143613-143753:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143262-143316:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:142076-142198:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:141681-141770:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:141055-141182:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:140383-140487:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:139761-139902:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:139069-139192:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:138542-138634:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138126-138286:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:137033-137131:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:134855-134956:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X3
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPAEIVQTNGETETAVLETKPPPSGLQPANQANDLLDLLGGSDITPVIPTAPPSKPASGGELLDLLGDLNLTGIPSITAYNKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(134855..134956,137033..137131,138126..138286,139069..139192,139761..139902,140383..140487,141055..141182,141681..141770,142076..142198,143262..143316,143613..143753,146825..146938,147716..147771,148183..148281,148529..148609,149070..149165,150232..150240,151326..151402,152327..152423,153615..153756,155884..156008,160127..160327))
location: region:134855-160327:-1
so has part: feature:160127-160327:-1:exon
so has part: feature:155884-156008:-1:exon
so has part: feature:153615-153756:-1:exon
so has part: feature:152327-152423:-1:exon
so has part: feature:151326-151402:-1:exon
so has part: feature:150232-150240:-1:exon
so has part: feature:149070-149165:-1:exon
so has part: feature:148529-148609:-1:exon
so has part: feature:148183-148281:-1:exon
so has part: feature:147716-147771:-1:exon
so has part: feature:146825-146938:-1:exon
so has part: feature:143613-143753:-1:exon
so has part: feature:143262-143316:-1:exon
so has part: feature:142076-142198:-1:exon
so has part: feature:141681-141770:-1:exon
so has part: feature:141055-141182:-1:exon
so has part: feature:140383-140487:-1:exon
so has part: feature:139761-139902:-1:exon
so has part: feature:139069-139192:-1:exon
so has part: feature:138126-138286:-1:exon
so has part: feature:137033-137131:-1:exon
so has part: feature:134855-134956:-1:exon

XP_016156647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160127-160327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155884-156008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153615-153756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152327-152423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151326-151402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150232-150240:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149070-149165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148529-148609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148183-148281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147716-147771:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:146825-146938:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143613-143753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143262-143316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:142076-142198:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:141681-141770:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:141055-141182:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:140383-140487:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:139761-139902:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:139069-139192:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138126-138286:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:137033-137131:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:134855-134956:-1:exon

AP1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: AP1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-1 complex subunit gamma-1 isoform X1
translation: MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSASVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPVMEKVTTNGPAEIVQTNGETETAVLETKPPPSGLQPANQANDLLDLLGGSDITPVIPTAPPSKPASGGELLDLLGDLNLTGSPVAAPAPQIAQPPFLLDGLTQPLFNDIAAGIPSITAYNKNGLKIEFTFERSNTNPSVTVITIQASNSTELDMTDFVFQAAVPKTFQLQLLSPSSSVIPAFNSGTITQVIKVLNPQKQQLRMRIKLTYNHKGSAMQDLAEVNNFPPQSWQ
SIO_010081: AP1G1
subclass of: SO_0000673
so part of: AP1G1
location: complement(join(134855..134956,137033..137131,138126..138286,138542..138634,139069..139192,139761..139902,140383..140487,141055..141182,141681..141770,142076..142198,143262..143316,143613..143753,146825..146938,147716..147771,148183..148281,148529..148609,149070..149165,150232..150240,151326..151402,152327..152423,153615..153756,155884..156008,160127..160327))
location: region:134855-160327:-1
so has part: feature:160127-160327:-1:exon
so has part: feature:155884-156008:-1:exon
so has part: feature:153615-153756:-1:exon
so has part: feature:152327-152423:-1:exon
so has part: feature:151326-151402:-1:exon
so has part: feature:150232-150240:-1:exon
so has part: feature:149070-149165:-1:exon
so has part: feature:148529-148609:-1:exon
so has part: feature:148183-148281:-1:exon
so has part: feature:147716-147771:-1:exon
so has part: feature:146825-146938:-1:exon
so has part: feature:143613-143753:-1:exon
so has part: feature:143262-143316:-1:exon
so has part: feature:142076-142198:-1:exon
so has part: feature:141681-141770:-1:exon
so has part: feature:141055-141182:-1:exon
so has part: feature:140383-140487:-1:exon
so has part: feature:139761-139902:-1:exon
so has part: feature:139069-139192:-1:exon
so has part: feature:138542-138634:-1:exon
so has part: feature:138126-138286:-1:exon
so has part: feature:137033-137131:-1:exon
so has part: feature:134855-134956:-1:exon

XP_005052260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:160127-160327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155884-156008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153615-153756:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:152327-152423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:151326-151402:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:150232-150240:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:149070-149165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148529-148609:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148183-148281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:147716-147771:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:146825-146938:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:143613-143753:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:143262-143316:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:142076-142198:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:141681-141770:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:141055-141182:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:140383-140487:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:139761-139902:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:139069-139192:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:138542-138634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:138126-138286:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:137033-137131:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:134855-134956:-1:exon

ATXN1L
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 171206..177428
location: region:171206-177428:1
so has part: feature:171206-177428:1:exon
subclass of: SO_0000010

101813436
type: Gene
SIO_000068: ncbigene

position:171206:1
position: 171206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177428:1
position: 177428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171206-177428:1:exon

ATXN1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ATXN1L
product: ataxin 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052275.2
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 171206..177428
location: region:171206-177428:1
so has part: feature:171206-177428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171206-177428:1:exon

ATXN1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ATXN1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ataxin-1-like
translation: MLYKVAAPPATFSPTGLHPVVNVSPLPPAFNVTSPIIQHPAVPFPSIHYAQIPSASLQLIGSHYTVPYAVPPAFLPSPLLSPSTNLTAPHVPHFVPYASLFTEEAAPSPQTTSPTHSFNKSASAASPGQMQHHTAPQPLDMAPGRIPVYYQMSRLPPGYSAYEAPVAGGSPESPQQDSQLSSEVAAANGGQRPLEQSVARRPSEAVDSASSAAEDCLPPGAAAGCMGDGQFLPGYQMLGREISVPTHRSTPDADLEVQRVVGVLASQDYHVLAAQRKDDLSPLNLCHNIPDGQGDVLRSTTDRAAAGNSQSRSPCGMSPEETVRQRQLAKGMVVANGKPVLVPVGSEPLRSSTSEALVRESPDAQARGNVLEKELGQLQPPSSSQLPSHFMKGAIIQLATGELKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGLVALHFVVGEQQSKVSIDVPPEHPFFVYGQGWSSCSPGRTAQLFALPCHRLQVGDVCISISLQSMNGNSASQANSPLTDQLVSARERLELTAQRPREPSDRAAERKSHTDRASTAQSSRAESSQPEAGSLYSLAPGFQRYSVQAEEPRASLLRPSFIPQEVKLSIEGRSNAGK
SIO_010081: ATXN1L
subclass of: SO_0000673
so part of: ATXN1L
location: 171293..173137
location: region:171293-173137:1
so has part: feature:171293-173137:1:exon

XP_005052332.2
type: Protein
SIO_000068: ncbiprotein

position:171293:1
position: 171293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173137:1
position: 173137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171293-173137:1:exon

ZNF821
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(179213..192714)
location: region:179213-192714:-1
so has part: feature:179213-192714:-1:exon
subclass of: SO_0000010

101818001
type: Gene
SIO_000068: ncbigene

position:179213:-1
position: 179213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192714:-1
position: 192714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179213-192714:-1:exon

ZNF821
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZNF821
product: zinc finger protein 821, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301157.1
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(179213..179878,180002..180198,180938..181104,181979..182083,182613..182755,183184..183309,183405..183512,191017..191106,192611..192714))
location: region:179213-192714:-1
so has part: feature:192611-192714:-1:exon
so has part: feature:191017-191106:-1:exon
so has part: feature:183405-183512:-1:exon
so has part: feature:183184-183309:-1:exon
so has part: feature:182613-182755:-1:exon
so has part: feature:181979-182083:-1:exon
so has part: feature:180938-181104:-1:exon
so has part: feature:180002-180198:-1:exon
so has part: feature:179213-179878:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192611-192714:-1:exon

position:192611:-1
position: 192611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:191017-191106:-1:exon

position:191017:-1
position: 191017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191106:-1
position: 191106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183405-183512:-1:exon

position:183405:-1
position: 183405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183512:-1
position: 183512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183184-183309:-1:exon

position:183184:-1
position: 183184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183309:-1
position: 183309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:182613-182755:-1:exon

position:182613:-1
position: 182613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182755:-1
position: 182755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:181979-182083:-1:exon

position:181979:-1
position: 181979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182083:-1
position: 182083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:180938-181104:-1:exon

position:180938:-1
position: 180938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181104:-1
position: 181104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:180002-180198:-1:exon

position:180002:-1
position: 180002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180198:-1
position: 180198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:179213-179878:-1:exon

position:179878:-1
position: 179878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF821
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZNF821
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 821
translation: MSRRKQTTPNKVHCTGLTSAGATGTYRVGKQRSDLSAFQEVTPEVLHSAGEQVFAGLEEQARQAMMKNNFPGTLGDQRPTIRPLQDPDSSSSGSDDEETTQDEVSSHTSEEDGSLVKVKKELENAERPVAGTPLMRENEVPESVNTEPMLGLSQCPLCQLECGSRDQLIAHVYQHTGAVVSAKSYLCPVCGRALSSPGSLGRHLLIHSEDQLSNCAVCGARFTSHATFNSEKLPEVLSADRLRAPQSQGPSGAEGKDVAFCAPVYPAGILLVCNNCAAYRRLLEAQSPGVRRWALRRQNEPLEVRLQRLERERTAKKSRRDNETPEEREVRRMRDREAKRLQRMQETDEQRARRLQRDREAMRLKRANETPEKRQARLIREREAKRLKRRLEKMDMMLRAQFGQDPSAMAALAAEMNFFQLPVSNVELESQLLGKMAFEEQSSSALH
SIO_010081: ZNF821
subclass of: SO_0000673
so part of: ZNF821
location: complement(join(179421..179878,180002..180198,180938..181104,181979..182083,182613..182755,183184..183309,183405..183512,191017..191056))
location: region:179421-191056:-1
so has part: feature:191017-191056:-1:exon
so has part: feature:183405-183512:-1:exon
so has part: feature:183184-183309:-1:exon
so has part: feature:182613-182755:-1:exon
so has part: feature:181979-182083:-1:exon
so has part: feature:180938-181104:-1:exon
so has part: feature:180002-180198:-1:exon
so has part: feature:179421-179878:-1:exon

XP_016156643.1
type: Protein
SIO_000068: ncbiprotein

position:179421:-1
position: 179421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191056:-1
position: 191056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191017-191056:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183405-183512:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183184-183309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182613-182755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181979-182083:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:180938-181104:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180002-180198:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179421-179878:-1:exon

ZNF821
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: ZNF821
product: zinc finger protein 821, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_001611708.1
SIO_010081: ZNF821
so part of: ZNF821
location: complement(join(184481..188916,191017..191106))
location: region:184481-191106:-1
so has part: feature:191017-191106:-1:exon
so has part: feature:184481-188916:-1:exon

position:184481:-1
position: 184481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191017-191106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184481-188916:-1:exon

position:188916:-1
position: 188916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF821
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: ZNF821
product: zinc finger protein 821, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_001611706.1
SIO_010081: ZNF821
so part of: ZNF821
location: complement(join(184481..189100,191017..191105))
location: region:184481-191105:-1
so has part: feature:191017-191105:-1:exon
so has part: feature:184481-189100:-1:exon

position:191105:-1
position: 191105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191017-191105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184481-189100:-1:exon

position:189100:-1
position: 189100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF821
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: ZNF821
product: zinc finger protein 821, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_001611707.1
SIO_010081: ZNF821
so part of: ZNF821
location: complement(join(184481..189087,191017..191104))
location: region:184481-191104:-1
so has part: feature:191017-191104:-1:exon
so has part: feature:184481-189087:-1:exon

position:191104:-1
position: 191104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191017-191104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184481-189087:-1:exon

position:189087:-1
position: 189087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IST1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 193338..201208
location: region:193338-201208:1
so has part: feature:193338-201208:1:exon
subclass of: SO_0000010

101818526
type: Gene
SIO_000068: ncbigene

position:193338:1
position: 193338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201208:1
position: 201208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193338-201208:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IST1
product: IST1, ESCRT-III associated factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016301154.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(193338..193491,193559..193607,195237..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197563,197647..197766,197810..197880,198934..199026,200098..200143,200296..201208)
location: region:193338-201208:1
so has part: feature:193338-193491:1:exon
so has part: feature:193559-193607:1:exon
so has part: feature:195237-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197563:1:exon
so has part: feature:197647-197766:1:exon
so has part: feature:197810-197880:1:exon
so has part: feature:198934-199026:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-201208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193338-193491:1:exon

position:193491:1
position: 193491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193559-193607:1:exon

position:193559:1
position: 193559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193607:1
position: 193607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195237-195336:1:exon

position:195237:1
position: 195237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195336:1
position: 195336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195916-196096:1:exon

position:195916:1
position: 195916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196096:1
position: 196096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196321-196408:1:exon

position:196321:1
position: 196321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196408:1
position: 196408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196691-196774:1:exon

position:196691:1
position: 196691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196774:1
position: 196774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:197126-197236:1:exon

position:197126:1
position: 197126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197236:1
position: 197236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:197548-197563:1:exon

position:197548:1
position: 197548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197563:1
position: 197563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:197647-197766:1:exon

position:197647:1
position: 197647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197766:1
position: 197766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:197810-197880:1:exon

position:197810:1
position: 197810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197880:1
position: 197880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:198934-199026:1:exon

position:198934:1
position: 198934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199026:1
position: 199026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:200098-200143:1:exon

position:200098:1
position: 200098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200143:1
position: 200143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:200296-201208:1:exon

position:200296:1
position: 200296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IST1
product: IST1, ESCRT-III associated factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_016301153.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(193339..193491,193559..193607,195237..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197635,197719..197766,197810..197880,198934..199026,200098..200143,200296..201208)
location: region:193339-201208:1
so has part: feature:193339-193491:1:exon
so has part: feature:193559-193607:1:exon
so has part: feature:195237-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197635:1:exon
so has part: feature:197719-197766:1:exon
so has part: feature:197810-197880:1:exon
so has part: feature:198934-199026:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-201208:1:exon

position:193339:1
position: 193339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193339-193491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193559-193607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195237-195336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195916-196096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196321-196408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196691-196774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197126-197236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197548-197635:1:exon

position:197635:1
position: 197635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:197719-197766:1:exon

position:197719:1
position: 197719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:197810-197880:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:198934-199026:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200098-200143:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:200296-201208:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IST1
product: IST1, ESCRT-III associated factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016301155.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(193339..193491,193559..193607,195237..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197635,197719..197766,197810..197880,200098..200143,200296..201208)
location: region:193339-201208:1
so has part: feature:193339-193491:1:exon
so has part: feature:193559-193607:1:exon
so has part: feature:195237-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197635:1:exon
so has part: feature:197719-197766:1:exon
so has part: feature:197810-197880:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-201208:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:193339-193491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193559-193607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195237-195336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195916-196096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196321-196408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196691-196774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197126-197236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197548-197635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:197719-197766:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:197810-197880:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200098-200143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200296-201208:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IST1
product: IST1, ESCRT-III associated factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016301156.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(193340..193491,193559..193607,195237..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197640,197767..197880,200098..200143,200296..201208)
location: region:193340-201208:1
so has part: feature:193340-193491:1:exon
so has part: feature:193559-193607:1:exon
so has part: feature:195237-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197640:1:exon
so has part: feature:197767-197880:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-201208:1:exon

position:193340:1
position: 193340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193340-193491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193559-193607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195237-195336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195916-196096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196321-196408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196691-196774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197126-197236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197548-197640:1:exon

position:197640:1
position: 197640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:197767-197880:1:exon

position:197767:1
position: 197767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:200098-200143:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200296-201208:1:exon

IST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IST1
product: IST1, ESCRT-III associated factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016301152.1
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(193341..193491,193559..193607,195237..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197640,197767..197880,198934..199026,200098..200143,200296..201208)
location: region:193341-201208:1
so has part: feature:193341-193491:1:exon
so has part: feature:193559-193607:1:exon
so has part: feature:195237-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197640:1:exon
so has part: feature:197767-197880:1:exon
so has part: feature:198934-199026:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-201208:1:exon

position:193341:1
position: 193341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:193341-193491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193559-193607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195237-195336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195916-196096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196321-196408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196691-196774:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197126-197236:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197548-197640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:197767-197880:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:198934-199026:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200098-200143:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:200296-201208:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X1
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGGGGFTAPMMGHDGLVPMPVMMPMPMPTTNPPFSYPPPKGPENFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNTEKDPAALVPGPEPKPEASPKPRAGAPNTVDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(195249..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197640,197767..197880,198934..199026,200098..200143,200296..200495)
location: region:195249-200495:1
so has part: feature:195249-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197640:1:exon
so has part: feature:197767-197880:1:exon
so has part: feature:198934-199026:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-200495:1:exon

XP_016156638.1
type: Protein
SIO_000068: ncbiprotein

position:195249:1
position: 195249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200495:1
position: 200495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195249-195336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195916-196096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196321-196408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196691-196774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197126-197236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197548-197640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197767-197880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198934-199026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200098-200143:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200495:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X5
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGGGGFTAPMMGHDGLVPMPVMMPMPMPTTNPPFSYPPPKGPIDEPNTEKDPAALVPGPEPKPEASPKPRAGAPNTVDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(195249..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197640,197767..197880,200098..200143,200296..200495)
location: region:195249-200495:1
so has part: feature:195249-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197640:1:exon
so has part: feature:197767-197880:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-200495:1:exon

XP_016156642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195249-195336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195916-196096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196321-196408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196691-196774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197126-197236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197548-197640:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197767-197880:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:200098-200143:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200296-200495:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X2
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGGGGFTAPMMGHDGLVPVPVMMPMPMPTTNPPFSYPPPKGPENFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNTEKDPAALVPGPEPKPEASPKPRAGAPNTVDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(195249..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197635,197719..197766,197810..197880,198934..199026,200098..200143,200296..200495)
location: region:195249-200495:1
so has part: feature:195249-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197635:1:exon
so has part: feature:197719-197766:1:exon
so has part: feature:197810-197880:1:exon
so has part: feature:198934-199026:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-200495:1:exon

XP_016156639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195249-195336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195916-196096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196321-196408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196691-196774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197126-197236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197548-197635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197719-197766:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197810-197880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198934-199026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200098-200143:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200296-200495:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X4
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGGGGFTAPMMGHDGLVPVPVMMPMPMPTTNPPFSYPPPKGPIDEPNTEKDPAALVPGPEPKPEASPKPRAGAPNTVDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(195249..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197635,197719..197766,197810..197880,200098..200143,200296..200495)
location: region:195249-200495:1
so has part: feature:195249-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197635:1:exon
so has part: feature:197719-197766:1:exon
so has part: feature:197810-197880:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-200495:1:exon

XP_016156641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195249-195336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195916-196096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196321-196408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196691-196774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197126-197236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197548-197635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197719-197766:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197810-197880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:200098-200143:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200296-200495:1:exon

IST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: IST1 homolog isoform X3
translation: MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAEAVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVNDRLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPAGGEADLIDVGFTDDVKKGGHGGGGGGGFTAPMMGHDGLVPVPVMMPMPMPTTNPPFSYPPPKGPENFSGLPVGTYQPFTNIHPPPIPANPPTYESIDEPNTEKDPAALVPGPEPKPEASPKPRAGAPNTVDNFVLPELPSVPDTLPTASAGANSSASEDIDFDDLSRRFEELKKKT
SIO_010081: IST1
subclass of: SO_0000673
so part of: IST1
location: join(195249..195336,195916..196096,196321..196408,196691..196774,197126..197236,197548..197563,197647..197766,197810..197880,198934..199026,200098..200143,200296..200495)
location: region:195249-200495:1
so has part: feature:195249-195336:1:exon
so has part: feature:195916-196096:1:exon
so has part: feature:196321-196408:1:exon
so has part: feature:196691-196774:1:exon
so has part: feature:197126-197236:1:exon
so has part: feature:197548-197563:1:exon
so has part: feature:197647-197766:1:exon
so has part: feature:197810-197880:1:exon
so has part: feature:198934-199026:1:exon
so has part: feature:200098-200143:1:exon
so has part: feature:200296-200495:1:exon

XP_016156640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:195249-195336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:195916-196096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196321-196408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:196691-196774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197126-197236:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197548-197563:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197647-197766:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197810-197880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:198934-199026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:200098-200143:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:200296-200495:1:exon

DHODH
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 201278..204717
location: region:201278-204717:1
so has part: feature:201278-204717:1:exon
subclass of: SO_0000010

101818196
type: Gene
SIO_000068: ncbigene

position:201278:1
position: 201278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204717:1
position: 204717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201278-204717:1:exon

DHODH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DHODH
product: dihydroorotate dehydrogenase (quinone)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005052207.2
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(201278..201741,201999..202198,202409..202491,202993..203180,203642..203755,204053..204206,204280..204439,204570..204717)
location: region:201278-204717:1
so has part: feature:201278-201741:1:exon
so has part: feature:201999-202198:1:exon
so has part: feature:202409-202491:1:exon
so has part: feature:202993-203180:1:exon
so has part: feature:203642-203755:1:exon
so has part: feature:204053-204206:1:exon
so has part: feature:204280-204439:1:exon
so has part: feature:204570-204717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:201278-201741:1:exon

position:201741:1
position: 201741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201999-202198:1:exon

position:201999:1
position: 201999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202198:1
position: 202198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:202409-202491:1:exon

position:202409:1
position: 202409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202491:1
position: 202491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202993-203180:1:exon

position:202993:1
position: 202993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203180:1
position: 203180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:203642-203755:1:exon

position:203642:1
position: 203642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203755:1
position: 203755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:204053-204206:1:exon

position:204053:1
position: 204053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204206:1
position: 204206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:204280-204439:1:exon

position:204280:1
position: 204280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204439:1
position: 204439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:204570-204717:1:exon

position:204570:1
position: 204570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHODH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DHODH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydroorotate dehydrogenase (quinone), mitochondrial
translation: MGWVVWDRDGTGRVGCGSGGGSLMVRCDTLAQGRLRALALGGCAVLLGSALAAGDERLYAAAVMPALRALPPEAAHGLALRAAALGLLLPTRPDGPALEVRVLGQRFRNPLGLAAGFDKQCEAVDGLYKMGFGFVEVGTVTPEPQEGNPKPRVFRLAEDEAVINRYGFNSHGHVAVERRLRARQETQIRLTAAGMPLGVNLGKNKSSADAAADYVAGVRTLGPLADYLVVNVSSPNTPGLRDLQGKAELRDLLSKVLVERDLLPCERKPAVLVKIAPDLTAQDKQDIASIVCELGVDGLIVSNTTVSRPSSLRSRQRGEPGGLSGKPLRELSTKTIREMYTLTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALVYHGPPVVAAVKRELEELLREQGFRNVMEAVGADHRC
SIO_010081: DHODH
subclass of: SO_0000673
so part of: DHODH
location: join(201448..201741,201999..202198,202409..202491,202993..203180,203642..203755,204053..204206,204280..204439,204570..204624)
location: region:201448-204624:1
so has part: feature:201448-201741:1:exon
so has part: feature:201999-202198:1:exon
so has part: feature:202409-202491:1:exon
so has part: feature:202993-203180:1:exon
so has part: feature:203642-203755:1:exon
so has part: feature:204053-204206:1:exon
so has part: feature:204280-204439:1:exon
so has part: feature:204570-204624:1:exon

XP_005052264.1
type: Protein
SIO_000068: ncbiprotein

position:201448:1
position: 201448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204624:1
position: 204624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201448-201741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201999-202198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202409-202491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202993-203180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203642-203755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:204053-204206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:204280-204439:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:204570-204624:1:exon

DHX38
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 206101..215548
location: region:206101-215548:1
so has part: feature:206101-215548:1:exon
subclass of: SO_0000010

101819693
type: Gene
SIO_000068: ncbigene

position:206101:1
position: 206101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215548:1
position: 215548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206101-215548:1:exon

DHX38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DHX38
product: DEAH-box helicase 38, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301178.1
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(206101..206313,206355..206458,206649..206836,206975..207076,207491..207647,207756..207874,207985..208061,208147..208302,208929..209090,209174..209281,210156..210268,210371..210508,210725..210911,210997..211182,211585..211725,211894..212004,212077..212193,212423..212530,212648..212760,213321..213529,213615..213769,213906..214061,214135..214269,214348..214473,214860..214955,215097..215218,215338..215548)
location: region:206101-215548:1
so has part: feature:206101-206313:1:exon
so has part: feature:206355-206458:1:exon
so has part: feature:206649-206836:1:exon
so has part: feature:206975-207076:1:exon
so has part: feature:207491-207647:1:exon
so has part: feature:207756-207874:1:exon
so has part: feature:207985-208061:1:exon
so has part: feature:208147-208302:1:exon
so has part: feature:208929-209090:1:exon
so has part: feature:209174-209281:1:exon
so has part: feature:210156-210268:1:exon
so has part: feature:210371-210508:1:exon
so has part: feature:210725-210911:1:exon
so has part: feature:210997-211182:1:exon
so has part: feature:211585-211725:1:exon
so has part: feature:211894-212004:1:exon
so has part: feature:212077-212193:1:exon
so has part: feature:212423-212530:1:exon
so has part: feature:212648-212760:1:exon
so has part: feature:213321-213529:1:exon
so has part: feature:213615-213769:1:exon
so has part: feature:213906-214061:1:exon
so has part: feature:214135-214269:1:exon
so has part: feature:214348-214473:1:exon
so has part: feature:214860-214955:1:exon
so has part: feature:215097-215218:1:exon
so has part: feature:215338-215548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206101-206313:1:exon

position:206313:1
position: 206313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206355-206458:1:exon

position:206355:1
position: 206355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206458:1
position: 206458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206649-206836:1:exon

position:206649:1
position: 206649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206836:1
position: 206836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:206975-207076:1:exon

position:206975:1
position: 206975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207076:1
position: 207076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:207491-207647:1:exon

position:207491:1
position: 207491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207647:1
position: 207647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:207756-207874:1:exon

position:207756:1
position: 207756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207874:1
position: 207874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:207985-208061:1:exon

position:207985:1
position: 207985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208061:1
position: 208061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:208147-208302:1:exon

position:208147:1
position: 208147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208302:1
position: 208302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:208929-209090:1:exon

position:208929:1
position: 208929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209090:1
position: 209090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:209174-209281:1:exon

position:209174:1
position: 209174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209281:1
position: 209281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:210156-210268:1:exon

position:210156:1
position: 210156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210268:1
position: 210268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:210371-210508:1:exon

position:210371:1
position: 210371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210508:1
position: 210508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:210725-210911:1:exon

position:210725:1
position: 210725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210911:1
position: 210911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:210997-211182:1:exon

position:210997:1
position: 210997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211182:1
position: 211182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:211585-211725:1:exon

position:211585:1
position: 211585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211725:1
position: 211725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:211894-212004:1:exon

position:211894:1
position: 211894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212004:1
position: 212004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:212077-212193:1:exon

position:212077:1
position: 212077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212193:1
position: 212193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:212423-212530:1:exon

position:212423:1
position: 212423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212530:1
position: 212530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:212648-212760:1:exon

position:212648:1
position: 212648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212760:1
position: 212760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:213321-213529:1:exon

position:213321:1
position: 213321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213529:1
position: 213529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:213615-213769:1:exon

position:213615:1
position: 213615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213769:1
position: 213769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:213906-214061:1:exon

position:213906:1
position: 213906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214061:1
position: 214061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:214135-214269:1:exon

position:214135:1
position: 214135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214269:1
position: 214269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:214348-214473:1:exon

position:214348:1
position: 214348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214473:1
position: 214473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:214860-214955:1:exon

position:214860:1
position: 214860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214955:1
position: 214955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:215097-215218:1:exon

position:215097:1
position: 215097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215218:1
position: 215218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:215338-215548:1:exon

position:215338:1
position: 215338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHX38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DHX38
product: DEAH-box helicase 38, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005052216.2
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(206101..206286,206328..206458,206649..206836,206975..207076,207491..207647,207756..207874,207985..208061,208147..208302,208929..209090,209174..209281,210156..210268,210371..210508,210725..210911,210997..211182,211585..211725,211894..212004,212077..212193,212423..212530,212648..212760,213321..213529,213615..213769,213906..214061,214135..214269,214348..214473,214860..214955,215097..215218,215338..215548)
location: region:206101-215548:1
so has part: feature:206101-206286:1:exon
so has part: feature:206328-206458:1:exon
so has part: feature:206649-206836:1:exon
so has part: feature:206975-207076:1:exon
so has part: feature:207491-207647:1:exon
so has part: feature:207756-207874:1:exon
so has part: feature:207985-208061:1:exon
so has part: feature:208147-208302:1:exon
so has part: feature:208929-209090:1:exon
so has part: feature:209174-209281:1:exon
so has part: feature:210156-210268:1:exon
so has part: feature:210371-210508:1:exon
so has part: feature:210725-210911:1:exon
so has part: feature:210997-211182:1:exon
so has part: feature:211585-211725:1:exon
so has part: feature:211894-212004:1:exon
so has part: feature:212077-212193:1:exon
so has part: feature:212423-212530:1:exon
so has part: feature:212648-212760:1:exon
so has part: feature:213321-213529:1:exon
so has part: feature:213615-213769:1:exon
so has part: feature:213906-214061:1:exon
so has part: feature:214135-214269:1:exon
so has part: feature:214348-214473:1:exon
so has part: feature:214860-214955:1:exon
so has part: feature:215097-215218:1:exon
so has part: feature:215338-215548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206101-206286:1:exon

position:206286:1
position: 206286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206328-206458:1:exon

position:206328:1
position: 206328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206649-206836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206975-207076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207491-207647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207756-207874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207985-208061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208147-208302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208929-209090:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209174-209281:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210156-210268:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210371-210508:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:210725-210911:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:210997-211182:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:211585-211725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:211894-212004:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:212077-212193:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:212423-212530:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212648-212760:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:213321-213529:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:213615-213769:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:213906-214061:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:214135-214269:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:214348-214473:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:214860-214955:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:215097-215218:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:215338-215548:1:exon

DHX38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X2
translation: MAAGSDESLHRLSGTSPSGEAGGLVLPRGTEQHVFKAPAPRVSLLGLDVLAAQKRRERQEEAAGGKRSRVASYKDWEEGRDEAGSAEEEEEDEADRSSRRARRNRHYRSVHVETPSYTGGVSEEFLERSRQRERERREHGVFASSKEEKDRKKERSRDRDQDRKRDREERERSHHSRSERDGSSERSGRRSEPESPRHRPKDAATPSRSSWEEDDSSYSSGHRSQWESPSPTPSCRDSERSHRLRDTDRRERDRSVRSRYSDKTPLPTPSYKYNEWADDRRHLGATPRLSRGRGRRTEGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKKREQHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYKTEQKFAEHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSESTVIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLVVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSARSTKIYTPGRKEQGEPLTPRRTPARFGL
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(206104..206313,206355..206458,206649..206836,206975..207076,207491..207647,207756..207874,207985..208061,208147..208302,208929..209090,209174..209281,210156..210268,210371..210508,210725..210911,210997..211182,211585..211725,211894..212004,212077..212193,212423..212530,212648..212760,213321..213529,213615..213769,213906..214061,214135..214269,214348..214473,214860..214955,215097..215218,215338..215422)
location: region:206104-215422:1
so has part: feature:206104-206313:1:exon
so has part: feature:206355-206458:1:exon
so has part: feature:206649-206836:1:exon
so has part: feature:206975-207076:1:exon
so has part: feature:207491-207647:1:exon
so has part: feature:207756-207874:1:exon
so has part: feature:207985-208061:1:exon
so has part: feature:208147-208302:1:exon
so has part: feature:208929-209090:1:exon
so has part: feature:209174-209281:1:exon
so has part: feature:210156-210268:1:exon
so has part: feature:210371-210508:1:exon
so has part: feature:210725-210911:1:exon
so has part: feature:210997-211182:1:exon
so has part: feature:211585-211725:1:exon
so has part: feature:211894-212004:1:exon
so has part: feature:212077-212193:1:exon
so has part: feature:212423-212530:1:exon
so has part: feature:212648-212760:1:exon
so has part: feature:213321-213529:1:exon
so has part: feature:213615-213769:1:exon
so has part: feature:213906-214061:1:exon
so has part: feature:214135-214269:1:exon
so has part: feature:214348-214473:1:exon
so has part: feature:214860-214955:1:exon
so has part: feature:215097-215218:1:exon
so has part: feature:215338-215422:1:exon

XP_016156664.1
type: Protein
SIO_000068: ncbiprotein

position:206104:1
position: 206104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215422:1
position: 215422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206104-206313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206355-206458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206649-206836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206975-207076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207491-207647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207756-207874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207985-208061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208147-208302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208929-209090:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209174-209281:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210156-210268:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210371-210508:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:210725-210911:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:210997-211182:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:211585-211725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:211894-212004:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:212077-212193:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:212423-212530:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212648-212760:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:213321-213529:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:213615-213769:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:213906-214061:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:214135-214269:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:214348-214473:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:214860-214955:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:215097-215218:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:215338-215422:1:exon

DHX38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DHX38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
translation: MAAGSDESLHRLSGTSPSGEAGGLVLPRGTEQHVFKAPAPRVSLLGLDVLAAQKRRERQEEAAGGKRSRVASYKDWEEGRDEAGSAEEEEEDEADRSSRRARRNRHYRSVHVETPSYTGGVSEEFLERSRQRERERREHGVFASSKEEKDRKKERSRDRDQDRKRDREERERSHHSRSERDGSSERSGRRSEPESPRHRPKDAATPSRSSWEEDDSSYSSGHRSQWESPSPTPSCRDSERSHRLRDTDRRERDRSVRSRYSDKTPLPTPSYKYNEWADDRRHLGATPRLSRGRGRRTEGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKKREQHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWELAGTKLGDIMGIKKEEEKDEMVTEDGKVDYKTEQKFAEHMKEKSEASSEFAKKKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSESTVIKYMTDGILLRESLREADLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMGCSSEILLVVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNSYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQERRNPLGSARSTKIYTPGRKEQGEPLTPRRTPARFGL
SIO_010081: DHX38
subclass of: SO_0000673
so part of: DHX38
location: join(206104..206286,206328..206458,206649..206836,206975..207076,207491..207647,207756..207874,207985..208061,208147..208302,208929..209090,209174..209281,210156..210268,210371..210508,210725..210911,210997..211182,211585..211725,211894..212004,212077..212193,212423..212530,212648..212760,213321..213529,213615..213769,213906..214061,214135..214269,214348..214473,214860..214955,215097..215218,215338..215422)
location: region:206104-215422:1
so has part: feature:206104-206286:1:exon
so has part: feature:206328-206458:1:exon
so has part: feature:206649-206836:1:exon
so has part: feature:206975-207076:1:exon
so has part: feature:207491-207647:1:exon
so has part: feature:207756-207874:1:exon
so has part: feature:207985-208061:1:exon
so has part: feature:208147-208302:1:exon
so has part: feature:208929-209090:1:exon
so has part: feature:209174-209281:1:exon
so has part: feature:210156-210268:1:exon
so has part: feature:210371-210508:1:exon
so has part: feature:210725-210911:1:exon
so has part: feature:210997-211182:1:exon
so has part: feature:211585-211725:1:exon
so has part: feature:211894-212004:1:exon
so has part: feature:212077-212193:1:exon
so has part: feature:212423-212530:1:exon
so has part: feature:212648-212760:1:exon
so has part: feature:213321-213529:1:exon
so has part: feature:213615-213769:1:exon
so has part: feature:213906-214061:1:exon
so has part: feature:214135-214269:1:exon
so has part: feature:214348-214473:1:exon
so has part: feature:214860-214955:1:exon
so has part: feature:215097-215218:1:exon
so has part: feature:215338-215422:1:exon

XP_005052273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206104-206286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:206328-206458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206649-206836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206975-207076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207491-207647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:207756-207874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:207985-208061:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:208147-208302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:208929-209090:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209174-209281:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:210156-210268:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210371-210508:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:210725-210911:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:210997-211182:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:211585-211725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:211894-212004:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:212077-212193:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:212423-212530:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:212648-212760:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:213321-213529:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:213615-213769:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:213906-214061:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:214135-214269:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:214348-214473:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:214860-214955:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:215097-215218:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:215338-215422:1:exon

PMFBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(215557..219037)
location: region:215557-219037:-1
so has part: feature:215557-219037:-1:exon
subclass of: SO_0000010

101819098
type: Gene
SIO_000068: ncbigene

position:215557:-1
position: 215557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219037:-1
position: 219037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:215557-219037:-1:exon

PMFBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PMFBP1
product: polyamine modulated factor 1 binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052214.2
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(215557..215693,216002..216169,216245..216412,216590..216754,217015..217143,217765..218013,218482..218642,218729..219037))
location: region:215557-219037:-1
so has part: feature:218729-219037:-1:exon
so has part: feature:218482-218642:-1:exon
so has part: feature:217765-218013:-1:exon
so has part: feature:217015-217143:-1:exon
so has part: feature:216590-216754:-1:exon
so has part: feature:216245-216412:-1:exon
so has part: feature:216002-216169:-1:exon
so has part: feature:215557-215693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218729-219037:-1:exon

position:218729:-1
position: 218729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218482-218642:-1:exon

position:218482:-1
position: 218482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218642:-1
position: 218642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:217765-218013:-1:exon

position:217765:-1
position: 217765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218013:-1
position: 218013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:217015-217143:-1:exon

position:217015:-1
position: 217015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217143:-1
position: 217143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:216590-216754:-1:exon

position:216590:-1
position: 216590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216754:-1
position: 216754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:216245-216412:-1:exon

position:216245:-1
position: 216245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216412:-1
position: 216412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:216002-216169:-1:exon

position:216002:-1
position: 216002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216169:-1
position: 216169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215557-215693:-1:exon

position:215693:-1
position: 215693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PMFBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PMFBP1
product: polyamine modulated factor 1 binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052213.2
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(215568..215693,215892..216169,216245..216412,216590..216754,217015..217143,217765..218013,218482..218642,218729..219035))
location: region:215568-219035:-1
so has part: feature:218729-219035:-1:exon
so has part: feature:218482-218642:-1:exon
so has part: feature:217765-218013:-1:exon
so has part: feature:217015-217143:-1:exon
so has part: feature:216590-216754:-1:exon
so has part: feature:216245-216412:-1:exon
so has part: feature:215892-216169:-1:exon
so has part: feature:215568-215693:-1:exon

position:215568:-1
position: 215568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:219035:-1
position: 219035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218729-219035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218482-218642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217765-218013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217015-217143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216590-216754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216245-216412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215892-216169:-1:exon

position:215892:-1
position: 215892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215568-215693:-1:exon

PMFBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PMFBP1
product: polyamine modulated factor 1 binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052212.2
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(215574..215693,215908..216169,216245..216412,216590..216754,217015..217143,217765..218013,218482..218642,218729..219037))
location: region:215574-219037:-1
so has part: feature:218729-219037:-1:exon
so has part: feature:218482-218642:-1:exon
so has part: feature:217765-218013:-1:exon
so has part: feature:217015-217143:-1:exon
so has part: feature:216590-216754:-1:exon
so has part: feature:216245-216412:-1:exon
so has part: feature:215908-216169:-1:exon
so has part: feature:215574-215693:-1:exon

position:215574:-1
position: 215574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218729-219037:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218482-218642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217765-218013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217015-217143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216590-216754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216245-216412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215908-216169:-1:exon

position:215908:-1
position: 215908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:215574-215693:-1:exon

PMFBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PMFBP1
product: polyamine modulated factor 1 binding protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_005052215.2
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(215574..215693,215908..216169,216245..216412,216590..216754,217015..217143,217765..218013,218482..218642,218888..219035))
location: region:215574-219035:-1
so has part: feature:218888-219035:-1:exon
so has part: feature:218482-218642:-1:exon
so has part: feature:217765-218013:-1:exon
so has part: feature:217015-217143:-1:exon
so has part: feature:216590-216754:-1:exon
so has part: feature:216245-216412:-1:exon
so has part: feature:215908-216169:-1:exon
so has part: feature:215574-215693:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218888-219035:-1:exon

position:218888:-1
position: 218888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218482-218642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217765-218013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217015-217143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216590-216754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216245-216412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215908-216169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215574-215693:-1:exon

PMFBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1-binding protein 1 isoform X3
translation: MVKSMAQEGCGEDCGQQQEQVLLRRGPQPHRALPCSSSCPRPGLSCGHQVLLAQGVAVPVPWDVREWPKYGTSGEVPAPQDQPEGSCRGLPGAKETLPELTSSIQQLQQETQDWQPKDQRQALVLEPQDGEPRACQDTQQEDLDPAQMLAMIEALQLDLDFCRETNHKQLVQLQEQERAVEQEHQELVILTQQFQALLGKISDASLDLKDQAVQTEVTSYLAAHSDFDSSHDIPPETRELLKQLGAQGQSQGLQHSPARLPEQMGATQAQEQQGLQQLSRDKEAIQGLHQKVAELQQQLCWQVQDMENLQAELDQAQQESAKQAEKIAAYKTHRQQLHRQLRKMQSFKEQNKQKTSSLQERLQELSSLVQHWQQLHLDRERTLAQREEELVVCKVELAFLKEELSKKTKQVLQGNNLTAPALHNSVELPAPNIHLQDNKQCKTKQGLN
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(215577..215693,216002..216169,216245..216412,216590..216754,217015..217143,217765..218013,218482..218642,218729..218918))
location: region:215577-218918:-1
so has part: feature:218729-218918:-1:exon
so has part: feature:218482-218642:-1:exon
so has part: feature:217765-218013:-1:exon
so has part: feature:217015-217143:-1:exon
so has part: feature:216590-216754:-1:exon
so has part: feature:216245-216412:-1:exon
so has part: feature:216002-216169:-1:exon
so has part: feature:215577-215693:-1:exon

XP_005052271.1
type: Protein
SIO_000068: ncbiprotein

position:215577:-1
position: 215577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218918:-1
position: 218918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218729-218918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218482-218642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217765-218013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217015-217143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216590-216754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216245-216412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216002-216169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215577-215693:-1:exon

PMFBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1-binding protein 1 isoform X4
translation: MVKSMAQEGCVREWPKYGTSGEVPAPQDQPEGSCRGLPGAKETLPELTSSIQQLQQETQDWQPKDQRQALVLEPQDGEPRACQDTQQEDLDPAQMLAMIEALQLDLDFCRETNHKQLVQLQEQERAVEQEHQELVILTQQFQALLGKISDASLDLKDQAVQTEVTSYLAAHSDFDSSHDIPPETRELLKQLGAQGQSQGLQHSPARLPEQMGATQAQEQQGLQQLSRDKEAIQGLHQKVAELQQQLCWQVQDMENLQAELDQAQQESAKQAEKIAAYKTHRQQLHRQLRKMQSFKEQNKQKTSSLQERLQELSSLVQHWQQLHLDRERTLAQREEELVVCKVELAFLKEELSKKTKQVQDTNRHSRTHYRMQEENLYLMIRTPKQPHKCSTGQQPDSTSPA
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(215653..215693,215908..216169,216245..216412,216590..216754,217015..217143,217765..218013,218482..218642,218888..218918))
location: region:215653-218918:-1
so has part: feature:218888-218918:-1:exon
so has part: feature:218482-218642:-1:exon
so has part: feature:217765-218013:-1:exon
so has part: feature:217015-217143:-1:exon
so has part: feature:216590-216754:-1:exon
so has part: feature:216245-216412:-1:exon
so has part: feature:215908-216169:-1:exon
so has part: feature:215653-215693:-1:exon

XP_005052272.1
type: Protein
SIO_000068: ncbiprotein

position:215653:-1
position: 215653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218888-218918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218482-218642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217765-218013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217015-217143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216590-216754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216245-216412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215908-216169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215653-215693:-1:exon

PMFBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1-binding protein 1 isoform X1
translation: MVKSMAQEGCGEDCGQQQEQVLLRRGPQPHRALPCSSSCPRPGLSCGHQVLLAQGVAVPVPWDVREWPKYGTSGEVPAPQDQPEGSCRGLPGAKETLPELTSSIQQLQQETQDWQPKDQRQALVLEPQDGEPRACQDTQQEDLDPAQMLAMIEALQLDLDFCRETNHKQLVQLQEQERAVEQEHQELVILTQQFQALLGKISDASLDLKDQAVQTEVTSYLAAHSDFDSSHDIPPETRELLKQLGAQGQSQGLQHSPARLPEQMGATQAQEQQGLQQLSRDKEAIQGLHQKVAELQQQLCWQVQDMENLQAELDQAQQESAKQAEKIAAYKTHRQQLHRQLRKMQSFKEQNKQKTSSLQERLQELSSLVQHWQQLHLDRERTLAQREEELVVCKVELAFLKEELSKKTKQVQDTNRHSRTHYRMQEENLYLMIRTPKQPHKCSTGQQPDSTSPA
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(215653..215693,215908..216169,216245..216412,216590..216754,217015..217143,217765..218013,218482..218642,218729..218918))
location: region:215653-218918:-1
so has part: feature:218729-218918:-1:exon
so has part: feature:218482-218642:-1:exon
so has part: feature:217765-218013:-1:exon
so has part: feature:217015-217143:-1:exon
so has part: feature:216590-216754:-1:exon
so has part: feature:216245-216412:-1:exon
so has part: feature:215908-216169:-1:exon
so has part: feature:215653-215693:-1:exon

XP_005052269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:218729-218918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218482-218642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217765-218013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217015-217143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216590-216754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216245-216412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215908-216169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215653-215693:-1:exon

PMFBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PMFBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyamine-modulated factor 1-binding protein 1 isoform X2
translation: MVKSMAQEGCGEDCGQQQEQVLLRRGPQPHRALPCSSSCPRPGLSCGHQVLLAQGVAVPVPWDVREWPKYGTSGEVPAPQDQPEGSCRGLPGAKETLPELTSSIQQLQQETQDWQPKDQRQALVLEPQDGEPRACQDTQQEDLDPAQMLAMIEALQLDLDFCRETNHKQLVQLQEQERAVEQEHQELVILTQQFQALLGKISDASLDLKDQAVQTEVTSYLAAHSDFDSSHDIPPETRELLKQLGAQGQSQGLQHSPARLPEQMGATQAQEQQGLQQLSRDKEAIQGLHQKVAELQQQLCWQVQDMENLQAELDQAQQESAKQAEKIAAYKTHRQQLHRQLRKMQSFKEQNKQKTSSLQERLQELSSLVQHWQQLHLDRERTLAQREEELVVCKVELAFLKEELSKKTKQVQDTNRHSRTHYRMQEENLYLMIRTPKQPHKCEQLKKFYRATT
SIO_010081: PMFBP1
subclass of: SO_0000673
so part of: PMFBP1
location: complement(join(215672..215693,215892..216169,216245..216412,216590..216754,217015..217143,217765..218013,218482..218642,218729..218918))
location: region:215672-218918:-1
so has part: feature:218729-218918:-1:exon
so has part: feature:218482-218642:-1:exon
so has part: feature:217765-218013:-1:exon
so has part: feature:217015-217143:-1:exon
so has part: feature:216590-216754:-1:exon
so has part: feature:216245-216412:-1:exon
so has part: feature:215892-216169:-1:exon
so has part: feature:215672-215693:-1:exon

XP_005052270.1
type: Protein
SIO_000068: ncbiprotein

position:215672:-1
position: 215672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218729-218918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:218482-218642:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:217765-218013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:217015-217143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216590-216754:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:216245-216412:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:215892-216169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:215672-215693:-1:exon

ZFHX3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ZFHX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(323869..738785)
location: region:323869-738785:-1
so has part: feature:323869-738785:-1:exon
subclass of: SO_0000010

101813837
type: Gene
SIO_000068: ncbigene

position:323869:-1
position: 323869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738785:-1
position: 738785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323869-738785:-1:exon

ZFHX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZFHX3
product: zinc finger homeobox 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301047.1
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(323869..324960,325030..325440,328011..328096,332735..335995,336375..338573,339058..339160,345204..345404,345592..345725,353658..353765,386031..386262,409142..409638,411477..411859,411942..413127,413189..414012,414385..414531,462759..462935,472990..473283,529128..529237,660822..660922,738662..738785))
location: region:323869-738785:-1
so has part: feature:738662-738785:-1:exon
so has part: feature:660822-660922:-1:exon
so has part: feature:529128-529237:-1:exon
so has part: feature:472990-473283:-1:exon
so has part: feature:462759-462935:-1:exon
so has part: feature:414385-414531:-1:exon
so has part: feature:413189-414012:-1:exon
so has part: feature:411942-413127:-1:exon
so has part: feature:411477-411859:-1:exon
so has part: feature:409142-409638:-1:exon
so has part: feature:386031-386262:-1:exon
so has part: feature:353658-353765:-1:exon
so has part: feature:345592-345725:-1:exon
so has part: feature:345204-345404:-1:exon
so has part: feature:339058-339160:-1:exon
so has part: feature:336375-338573:-1:exon
so has part: feature:332735-335995:-1:exon
so has part: feature:328011-328096:-1:exon
so has part: feature:325030-325440:-1:exon
so has part: feature:323869-324960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738662-738785:-1:exon

position:738662:-1
position: 738662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660822-660922:-1:exon

position:660822:-1
position: 660822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660922:-1
position: 660922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529128-529237:-1:exon

position:529128:-1
position: 529128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529237:-1
position: 529237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:472990-473283:-1:exon

position:472990:-1
position: 472990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473283:-1
position: 473283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:462759-462935:-1:exon

position:462759:-1
position: 462759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462935:-1
position: 462935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:414385-414531:-1:exon

position:414385:-1
position: 414385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414531:-1
position: 414531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:413189-414012:-1:exon

position:413189:-1
position: 413189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414012:-1
position: 414012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:411942-413127:-1:exon

position:411942:-1
position: 411942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413127:-1
position: 413127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:411477-411859:-1:exon

position:411477:-1
position: 411477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411859:-1
position: 411859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:409142-409638:-1:exon

position:409142:-1
position: 409142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409638:-1
position: 409638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:386031-386262:-1:exon

position:386031:-1
position: 386031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386262:-1
position: 386262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:353658-353765:-1:exon

position:353658:-1
position: 353658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353765:-1
position: 353765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:345592-345725:-1:exon

position:345592:-1
position: 345592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345725:-1
position: 345725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:345204-345404:-1:exon

position:345204:-1
position: 345204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345404:-1
position: 345404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:339058-339160:-1:exon

position:339058:-1
position: 339058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339160:-1
position: 339160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:336375-338573:-1:exon

position:336375:-1
position: 336375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338573:-1
position: 338573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:332735-335995:-1:exon

position:332735:-1
position: 332735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335995:-1
position: 335995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:328011-328096:-1:exon

position:328011:-1
position: 328011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328096:-1
position: 328096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:325030-325440:-1:exon

position:325030:-1
position: 325030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325440:-1
position: 325440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:323869-324960:-1:exon

position:324960:-1
position: 324960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZFHX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZFHX3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger homeobox protein 3
translation: MEGCDSPVIPGKDNGCGIPQHQQWTDLSSAHLPEGPPPPPRGDSGTDSSEDGDDESDVENLAGEIVYQPDGSAYIVESLSQLAQGGGAGGSGALPSLLPNSLPKQGEPSAAAPVYPQIINTFHIASSFGKWFEGSDQAFPNTSALAGISPVLHSFRVFDVRHKSNKDYLNSDGSAKSSCVSKDVPNNVDLSKFDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEEERKILSNKNISAIIQGIGKDKEPLVSFLEPKNKTFQHPLVSAANLIGPGHSFYGKFSGICMEGEQALQAGAAGGAEPPPAAGVLAPSALLNLGGLTSSALKTPITSVPLGPLASSPTKSSEGKDPGVAGGEKQEGDDQDSLSEKVEPAEEVEEEEEEDVEEEEEEEEEEEEEEDEDDEGCKGLFPNELEDELEDRPQEDVGAVAGSGSSKKDLALSNQSISNSPLMPNVLQTLSRGTASTSSNSASSFVFDGANRRNHLSFNNEGGGASVAEGSRRLDFIDESANKDNATAPEPNESAEGEDGSYISHHQHAGPLCELGGGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQQTLEAHMKEKHPEPGGSCVYCKSGQPHPRLARGESYTCGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNMQNLQNGGGEQVFSHTAGAAAAAAAAGGGAANIGSTCGAPSPTKPKTKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMSQIQHNRHLGLGSLPSPAEAELYQYYLAQNMNLPNLKMDSTSSDAQFMMGGFQLDPTNPMATMAPSLVGGELPLDMRLGGGQLVSEELMNLGESFTQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLPEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQHHESGLEGESCYYHCVLCTYSTKAKLNLLQHVRSMKHQRSESLRKLQRLQKGLPEEEEELGQIFTIRKCPPAEAEEPSEDVEGPSETAGDAEEPPKEPESAGDKDQSKWTAPASQPEKELTEPPASSKRISFPSSSESPLSFKWSKTSEETKSEQMYQCPYCKYSNPDVNRLRVHAMSQHSVQPLLRCPLCQDMLNNKIHLQLHLTHLHSVAPDCVEKLIMTVTTPEVMMPSSMFLPAAAPEKDGNSGTEELGKQSEVSEDAGKSLAPSDAAEHSGDAKPAAEPGAAREDSAFLCWKKGCSQVFKSSAALQTHFSDVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLVNGDLLAMGDPSLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAAGSSNGAGGGSSSSSLSLGSSTPSPVSASSSNAFATTSTSTSGTAPIPSLLTQVSSDSVGIPPLGNAVSTNISSPAEPKEVNRKKLADMIASRQQQQQQQQQQQQQQQQQQQQQAQTLAQAQVQAHLQQELQQQAALLQSQLFNPALLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPSLLEDLKAQVQLPQQSHPQLLQQQQGQLSLSQPHSVLLQQSQHPEKKNKSVVKEKDKETPRERESSERGDNNVTLKESLPDNLKPKEKKDFVSGSSSEPSMLPPRIASDARGNATKALLENFGFELVIQYNENKQKGQKKNGKTEQGENLEKLECDTCGKFFSNILILKSHQEHVHQHYFPFKQLERFAKQYREHYDKLYPLRPQTPEPPPPPPLPPAPAQPAAAPQPAAAPAIPA…
SIO_010081: ZFHX3
subclass of: SO_0000673
so part of: ZFHX3
location: complement(join(324051..324960,325030..325440,328011..328096,332735..335995,336375..338573,339058..339160,345204..345404,345592..345725,353658..353765,386031..386262,409142..409638,411477..411859,411942..413127,413189..414012,414385..414485))
location: region:324051-414485:-1
so has part: feature:414385-414485:-1:exon
so has part: feature:413189-414012:-1:exon
so has part: feature:411942-413127:-1:exon
so has part: feature:411477-411859:-1:exon
so has part: feature:409142-409638:-1:exon
so has part: feature:386031-386262:-1:exon
so has part: feature:353658-353765:-1:exon
so has part: feature:345592-345725:-1:exon
so has part: feature:345204-345404:-1:exon
so has part: feature:339058-339160:-1:exon
so has part: feature:336375-338573:-1:exon
so has part: feature:332735-335995:-1:exon
so has part: feature:328011-328096:-1:exon
so has part: feature:325030-325440:-1:exon
so has part: feature:324051-324960:-1:exon

XP_016156533.1
type: Protein
SIO_000068: ncbiprotein

position:324051:-1
position: 324051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414485:-1
position: 414485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414385-414485:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413189-414012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:411942-413127:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411477-411859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409142-409638:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386031-386262:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:353658-353765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:345592-345725:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:345204-345404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:339058-339160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:336375-338573:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:332735-335995:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:328011-328096:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:325030-325440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:324051-324960:-1:exon

PSMD7
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 843594..846677
location: region:843594-846677:1
so has part: feature:843594-846677:1:exon
subclass of: SO_0000010

101814040
type: Gene
SIO_000068: ncbigene

position:843594:1
position: 843594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846677:1
position: 846677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843594-846677:1:exon

PSMD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PSMD7
product: proteasome 26S subunit, non-ATPase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052277.1
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(843594..843697,844125..844216,844478..844570,845021..845118,845406..845486,846018..846109,846239..846677)
location: region:843594-846677:1
so has part: feature:843594-843697:1:exon
so has part: feature:844125-844216:1:exon
so has part: feature:844478-844570:1:exon
so has part: feature:845021-845118:1:exon
so has part: feature:845406-845486:1:exon
so has part: feature:846018-846109:1:exon
so has part: feature:846239-846677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:843594-843697:1:exon

position:843697:1
position: 843697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:844125-844216:1:exon

position:844125:1
position: 844125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844216:1
position: 844216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:844478-844570:1:exon

position:844478:1
position: 844478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844570:1
position: 844570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:845021-845118:1:exon

position:845021:1
position: 845021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845118:1
position: 845118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:845406-845486:1:exon

position:845406:1
position: 845406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845486:1
position: 845486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:846018-846109:1:exon

position:846018:1
position: 846018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846109:1
position: 846109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:846239-846677:1:exon

position:846239:1
position: 846239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PSMD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 26S proteasome non-ATPase regulatory subunit 7
translation: MAAVPSQDGDVTELAVDRVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGSWQKKILDVSNSFAVPFDEDDKDDTVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVALGKLPINHQIIYHLQDVFNLLPDVNLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKEGQEKEESKKERKDEKEKDKEKSDGKKEEKKEKK
SIO_010081: PSMD7
subclass of: SO_0000673
so part of: PSMD7
location: join(843594..843697,844125..844216,844478..844570,845021..845118,845406..845486,846018..846109,846239..846677)
location: region:843594-846677:1
so has part: feature:843594-843697:1:exon
so has part: feature:844125-844216:1:exon
so has part: feature:844478-844570:1:exon
so has part: feature:845021-845118:1:exon
so has part: feature:845406-845486:1:exon
so has part: feature:846018-846109:1:exon
so has part: feature:846239-846677:1:exon

XP_005052334.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:843594-843697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844125-844216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844478-844570:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845021-845118:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845406-845486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:846018-846109:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:846239-846677:1:exon

WWP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(846748..877660)
location: region:846748-877660:-1
so has part: feature:846748-877660:-1:exon
subclass of: SO_0000010

101820426
type: Gene
SIO_000068: ncbigene

position:846748:-1
position: 846748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877660:-1
position: 877660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846748-877660:-1:exon

WWP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WWP2
product: WW domain containing E3 ubiquitin protein ligase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301145.1
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(846748..848054,848178..848250,849184..849280,849376..849480,849748..849868,850375..850515,850608..850741,851704..851863,852834..852922,853042..853113,853226..853304,853407..853535,853787..853868,855308..855362,857817..857991,858254..858343,862590..863132,867394..867486,869129..869270,874605..874723,875119..875266,875766..875849,877598..877660))
location: region:846748-877660:-1
so has part: feature:877598-877660:-1:exon
so has part: feature:875766-875849:-1:exon
so has part: feature:875119-875266:-1:exon
so has part: feature:874605-874723:-1:exon
so has part: feature:869129-869270:-1:exon
so has part: feature:867394-867486:-1:exon
so has part: feature:862590-863132:-1:exon
so has part: feature:858254-858343:-1:exon
so has part: feature:857817-857991:-1:exon
so has part: feature:855308-855362:-1:exon
so has part: feature:853787-853868:-1:exon
so has part: feature:853407-853535:-1:exon
so has part: feature:853226-853304:-1:exon
so has part: feature:853042-853113:-1:exon
so has part: feature:852834-852922:-1:exon
so has part: feature:851704-851863:-1:exon
so has part: feature:850608-850741:-1:exon
so has part: feature:850375-850515:-1:exon
so has part: feature:849748-849868:-1:exon
so has part: feature:849376-849480:-1:exon
so has part: feature:849184-849280:-1:exon
so has part: feature:848178-848250:-1:exon
so has part: feature:846748-848054:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877598-877660:-1:exon

position:877598:-1
position: 877598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875766-875849:-1:exon

position:875766:-1
position: 875766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875849:-1
position: 875849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875119-875266:-1:exon

position:875119:-1
position: 875119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875266:-1
position: 875266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:874605-874723:-1:exon

position:874605:-1
position: 874605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874723:-1
position: 874723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:869129-869270:-1:exon

position:869129:-1
position: 869129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869270:-1
position: 869270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:867394-867486:-1:exon

position:867394:-1
position: 867394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867486:-1
position: 867486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:862590-863132:-1:exon

position:862590:-1
position: 862590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863132:-1
position: 863132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:858254-858343:-1:exon

position:858254:-1
position: 858254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858343:-1
position: 858343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:857817-857991:-1:exon

position:857817:-1
position: 857817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:857991:-1
position: 857991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:855308-855362:-1:exon

position:855308:-1
position: 855308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855362:-1
position: 855362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:853787-853868:-1:exon

position:853787:-1
position: 853787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853868:-1
position: 853868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:853407-853535:-1:exon

position:853407:-1
position: 853407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853535:-1
position: 853535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:853226-853304:-1:exon

position:853226:-1
position: 853226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853304:-1
position: 853304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:853042-853113:-1:exon

position:853042:-1
position: 853042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853113:-1
position: 853113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:852834-852922:-1:exon

position:852834:-1
position: 852834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852922:-1
position: 852922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:851704-851863:-1:exon

position:851704:-1
position: 851704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851863:-1
position: 851863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:850608-850741:-1:exon

position:850608:-1
position: 850608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850741:-1
position: 850741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:850375-850515:-1:exon

position:850375:-1
position: 850375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850515:-1
position: 850515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:849748-849868:-1:exon

position:849748:-1
position: 849748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849868:-1
position: 849868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:849376-849480:-1:exon

position:849376:-1
position: 849376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849480:-1
position: 849480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:849184-849280:-1:exon

position:849184:-1
position: 849184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849280:-1
position: 849280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:848178-848250:-1:exon

position:848178:-1
position: 848178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848250:-1
position: 848250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:846748-848054:-1:exon

position:848054:-1
position: 848054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WWP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD4-like E3 ubiquitin-protein ligase WWP2
translation: MAAASSSRARAGPPCEKSPLSVKVVSVKPKAQSRPARMNCFVEVAGDGLPSETKKTGKQMGVSELLWNEILTLNVTAQSHLELKVWICHTLRNELLGAASVSLGSLLKGGGKLENRQLTLDLQAENKGSVVSGGELTIFLDGPAVALGSVPDGRGGGGGGAAAGRDPPSTAVATEGQHQPPSTNCFGSRPRTHRHAAGAARGGTGSGEQSPSARSRHRQQPKSSQHTSTANGTANGTATSVANGVANGTGESVGPRGVWVEQAPRAPCWGCHPPCALLPGTISQPWPLPGADPVPSVPAANGDTVGAVDMDEDRPAAGASVPTPAAAGTADGSTAPAPAALSSSREAEEAASGSSAPPARAAVLALDALPPGWEQRELPNGRVYYVDHNNKTTTWERPLPPGWEKRVDPRGRYYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRSQLQGAMQQFSQRFLYQSSGAPSDNDPLGPLPPGWEKRQDNGRVYYVNHNTRTTQWEDPRTQGMIQEPPLPPGWEMKYTNESVRYFVDHNTRTTTFKDPRPGFESGSKHGGSPGAYDRSFRWKYHQFRFLCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEEGLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALYHGKFIDTGFTLPFYKRMLNKRPTLKDLESIDPEFYNSIVWTKENSLEECGLELYFIQDMEILGKVTTHELKEGGESIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVVPLEWLRYFDEKELELMLCGMQEIDMNDWQKNTIYRHYTKNSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAELIGSNGPQKFCIDKVGKETWLPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE
SIO_010081: WWP2
subclass of: SO_0000673
so part of: WWP2
location: complement(join(847955..848054,848178..848250,849184..849280,849376..849480,849748..849868,850375..850515,850608..850741,851704..851863,852834..852922,853042..853113,853226..853304,853407..853535,853787..853868,855308..855362,857817..857991,858254..858343,862590..863132,867394..867486,869129..869270,874605..874723,875119..875266,875766..875835))
location: region:847955-875835:-1
so has part: feature:875766-875835:-1:exon
so has part: feature:875119-875266:-1:exon
so has part: feature:874605-874723:-1:exon
so has part: feature:869129-869270:-1:exon
so has part: feature:867394-867486:-1:exon
so has part: feature:862590-863132:-1:exon
so has part: feature:858254-858343:-1:exon
so has part: feature:857817-857991:-1:exon
so has part: feature:855308-855362:-1:exon
so has part: feature:853787-853868:-1:exon
so has part: feature:853407-853535:-1:exon
so has part: feature:853226-853304:-1:exon
so has part: feature:853042-853113:-1:exon
so has part: feature:852834-852922:-1:exon
so has part: feature:851704-851863:-1:exon
so has part: feature:850608-850741:-1:exon
so has part: feature:850375-850515:-1:exon
so has part: feature:849748-849868:-1:exon
so has part: feature:849376-849480:-1:exon
so has part: feature:849184-849280:-1:exon
so has part: feature:848178-848250:-1:exon
so has part: feature:847955-848054:-1:exon

XP_016156631.1
type: Protein
SIO_000068: ncbiprotein

position:847955:-1
position: 847955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875835:-1
position: 875835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875766-875835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875119-875266:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874605-874723:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:869129-869270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:867394-867486:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:862590-863132:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858254-858343:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:857817-857991:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855308-855362:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:853787-853868:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:853407-853535:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853226-853304:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:853042-853113:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:852834-852922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:851704-851863:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:850608-850741:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850375-850515:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:849748-849868:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:849376-849480:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:849184-849280:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:848178-848250:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:847955-848054:-1:exon

NOB1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 877739..880861
location: region:877739-880861:1
so has part: feature:877739-880861:1:exon
subclass of: SO_0000010

101814234
type: Gene
SIO_000068: ncbigene

position:877739:1
position: 877739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880861:1
position: 880861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877739-880861:1:exon

NOB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NOB1
product: NIN1/PSMD8 binding protein 1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052278.2
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(877739..877889,877970..878032,879223..879432,879635..879732,879809..879953,880358..880861)
location: region:877739-880861:1
so has part: feature:877739-877889:1:exon
so has part: feature:877970-878032:1:exon
so has part: feature:879223-879432:1:exon
so has part: feature:879635-879732:1:exon
so has part: feature:879809-879953:1:exon
so has part: feature:880358-880861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877739-877889:1:exon

position:877889:1
position: 877889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:877970-878032:1:exon

position:877970:1
position: 877970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878032:1
position: 878032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:879223-879432:1:exon

position:879223:1
position: 879223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879432:1
position: 879432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:879635-879732:1:exon

position:879635:1
position: 879635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879732:1
position: 879732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:879809-879953:1:exon

position:879809:1
position: 879809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:879953:1
position: 879953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:880358-880861:1:exon

position:880358:1
position: 880358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NOB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein NOB1
translation: MGHADMARVPHVVADTGAFLSAAPLQDIADALYTVPEVLAEIRDPPPAISGSPEPPEEQRSSAGGASAGEEEEDEESDDEGWITPSNLKQAQQDTGHCDTAPIGIQVGCVTTDFAMQNVLLQMGLHVLAVNGMLIRRARSYILRCHGCFRTTSDMTKVFCPHCGNKTLKKVAVSVSDDGSLHMHFSRNPKVLNPRGLRYPLPAPQGGKHANNPHLVEDQRFPQQRLSRKARQKTNVFDPDYLAGASPFAENDVHSRAAQLHLRDAALGAGRRRLNPNAVTKKFVRRR
SIO_010081: NOB1
subclass of: SO_0000673
so part of: NOB1
location: join(877812..877889,877970..878032,879223..879432,879635..879732,879809..879953,880358..880627)
location: region:877812-880627:1
so has part: feature:877812-877889:1:exon
so has part: feature:877970-878032:1:exon
so has part: feature:879223-879432:1:exon
so has part: feature:879635-879732:1:exon
so has part: feature:879809-879953:1:exon
so has part: feature:880358-880627:1:exon

XP_005052335.2
type: Protein
SIO_000068: ncbiprotein

position:877812:1
position: 877812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880627:1
position: 880627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:877812-877889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:877970-878032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:879223-879432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:879635-879732:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:879809-879953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:880358-880627:1:exon

NFAT5
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(885797..919309)
location: region:885797-919309:-1
so has part: feature:885797-919309:-1:exon
subclass of: SO_0000010

101820624
type: Gene
SIO_000068: ncbigene

position:885797:-1
position: 885797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919309:-1
position: 919309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885797-919309:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NFAT5
product: nuclear factor of activated T-cells 5, tonicity-responsive, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005052219.2
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(885797..887681,888595..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907995,919166..919309))
location: region:885797-919309:-1
so has part: feature:919166-919309:-1:exon
so has part: feature:907437-907995:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888595-888837:-1:exon
so has part: feature:885797-887681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:919166-919309:-1:exon

position:919166:-1
position: 919166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:907437-907995:-1:exon

position:907437:-1
position: 907437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907995:-1
position: 907995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:903260-903452:-1:exon

position:903260:-1
position: 903260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903452:-1
position: 903452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900115-900305:-1:exon

position:900115:-1
position: 900115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900305:-1
position: 900305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:899143-899315:-1:exon

position:899143:-1
position: 899143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899315:-1
position: 899315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:896016-896150:-1:exon

position:896016:-1
position: 896016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896150:-1
position: 896150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:895793-895845:-1:exon

position:895793:-1
position: 895793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895845:-1
position: 895845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:893993-894125:-1:exon

position:893993:-1
position: 893993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894125:-1
position: 894125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:893381-893458:-1:exon

position:893381:-1
position: 893381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893458:-1
position: 893458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:892415-892527:-1:exon

position:892415:-1
position: 892415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892527:-1
position: 892527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:889457-891890:-1:exon

position:889457:-1
position: 889457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891890:-1
position: 891890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:888595-888837:-1:exon

position:888595:-1
position: 888595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888837:-1
position: 888837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:885797-887681:-1:exon

position:887681:-1
position: 887681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NFAT5
product: nuclear factor of activated T-cells 5, tonicity-responsive, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005052220.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(885797..887681,888595..888837,889457..891890,892415..892524,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907995,919166..919297))
location: region:885797-919297:-1
so has part: feature:919166-919297:-1:exon
so has part: feature:907437-907995:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892524:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888595-888837:-1:exon
so has part: feature:885797-887681:-1:exon

position:919297:-1
position: 919297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919166-919297:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:907437-907995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892415-892524:-1:exon

position:892524:-1
position: 892524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888595-888837:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:885797-887681:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NFAT5
product: nuclear factor of activated T-cells 5, tonicity-responsive, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005052223.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(885797..887681,888595..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907856..907995,919166..919252))
location: region:885797-919252:-1
so has part: feature:919166-919252:-1:exon
so has part: feature:907856-907995:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888595-888837:-1:exon
so has part: feature:885797-887681:-1:exon

position:919252:-1
position: 919252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919166-919252:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:907856-907995:-1:exon

position:907856:-1
position: 907856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892415-892527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888595-888837:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:885797-887681:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NFAT5
product: nuclear factor of activated T-cells 5, tonicity-responsive, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016301142.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(885797..887681,888595..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907995,908465..908526,919166..919249))
location: region:885797-919249:-1
so has part: feature:919166-919249:-1:exon
so has part: feature:908465-908526:-1:exon
so has part: feature:907437-907995:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888595-888837:-1:exon
so has part: feature:885797-887681:-1:exon

position:919249:-1
position: 919249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919166-919249:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908465-908526:-1:exon

position:908465:-1
position: 908465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908526:-1
position: 908526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:907437-907995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892415-892527:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:888595-888837:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885797-887681:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NFAT5
product: nuclear factor of activated T-cells 5, tonicity-responsive, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016301143.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(885797..887681,888595..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907995,908465..908526,913290..913402,919166..919199))
location: region:885797-919199:-1
so has part: feature:919166-919199:-1:exon
so has part: feature:913290-913402:-1:exon
so has part: feature:908465-908526:-1:exon
so has part: feature:907437-907995:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888595-888837:-1:exon
so has part: feature:885797-887681:-1:exon

position:919199:-1
position: 919199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919166-919199:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913290-913402:-1:exon

position:913290:-1
position: 913290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913402:-1
position: 913402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:908465-908526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:907437-907995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:892415-892527:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:888595-888837:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885797-887681:-1:exon

NFAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NFAT5
product: nuclear factor of activated T-cells 5, tonicity-responsive, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016301144.1
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(885797..887681,888595..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907995,908465..908526,909958..909976))
location: region:885797-909976:-1
so has part: feature:909958-909976:-1:exon
so has part: feature:908465-908526:-1:exon
so has part: feature:907437-907995:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888595-888837:-1:exon
so has part: feature:885797-887681:-1:exon

position:909976:-1
position: 909976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909958-909976:-1:exon

position:909958:-1
position: 909958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:908465-908526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:907437-907995:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:892415-892527:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:888595-888837:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885797-887681:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X1
translation: MSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIMVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKVKATGCNLEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGPTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPEPLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQPRDSQPREVLQSDGTVVTLSQLAEASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDPLNADIFQQVSQIQSGVNPGMFSSSDTAVHSRAENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAMVMGMQQNMCQAAPQMQSDLFSASTAGSGALQQSPVYQQASHMMGGLSSSEDMQMQCELFSSSPGVNGGEAAAPAQQPVSSNGPAMFQPSSSAEGEEASGQGKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQAGGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSSQAEAQQPTIFHNSPQIQLVQGSPSSQDQQVTLFISSASMSALSVQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQPPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLPQQLPETPPLPPAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(888599..888837,889457..891890,892415..892524,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907995,919166..919223))
location: region:888599-919223:-1
so has part: feature:919166-919223:-1:exon
so has part: feature:907437-907995:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892524:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888599-888837:-1:exon

XP_005052277.1
type: Protein
SIO_000068: ncbiprotein

position:888599:-1
position: 888599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919223:-1
position: 919223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919166-919223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:907437-907995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892415-892524:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888599-888837:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X4
translation: MSQTSGGEAGSPPPAVVAADASSAPSSSSMGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIMVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNLEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGPTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPEPLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQPRDSQPREVLQSDGTVVTLSQLAEASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDPLNADIFQQVSQIQSGVNPGMFSSSDTAVHSRAENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAMVMGMQQNMCQAAPQMQSDLFSASTAGSGALQQSPVYQQASHMMGGLSSSEDMQMQCELFSSSPGVNGGEAAAPAQQPVSSNGPAMFQPSSSAEGEEASGQGKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQAGGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSSQAEAQQPTIFHNSPQIQLVQGSPSSQDQQVTLFISSASMSALSVQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQPPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLPQQLPETPPLPPAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(888599..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907995,919166..919223))
location: region:888599-919223:-1
so has part: feature:919166-919223:-1:exon
so has part: feature:907437-907995:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888599-888837:-1:exon

XP_005052276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:919166-919223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:907437-907995:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:892415-892527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888599-888837:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X3
translation: MLLQLPPLPPWAVLAAPLPPLPALPFTLPQSPTARLCKWRAAPRPWGASENQKGAGGKKTPMLCGQYPTKSEGKELKIMVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNLEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGPTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPEPLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQPRDSQPREVLQSDGTVVTLSQLAEASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDPLNADIFQQVSQIQSGVNPGMFSSSDTAVHSRAENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAMVMGMQQNMCQAAPQMQSDLFSASTAGSGALQQSPVYQQASHMMGGLSSSEDMQMQCELFSSSPGVNGGEAAAPAQQPVSSNGPAMFQPSSSAEGEEASGQGKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQAGGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSSQAEAQQPTIFHNSPQIQLVQGSPSSQDQQVTLFISSASMSALSVQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQPPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLPQQLPETPPLPPAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(888599..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907856..907995))
location: region:888599-907995:-1
so has part: feature:907856-907995:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888599-888837:-1:exon

XP_005052280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:907856-907995:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892415-892527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888599-888837:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X2
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIMVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNLEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGPTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPEPLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQPRDSQPREVLQSDGTVVTLSQLAEASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDPLNADIFQQVSQIQSGVNPGMFSSSDTAVHSRAENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAMVMGMQQNMCQAAPQMQSDLFSASTAGSGALQQSPVYQQASHMMGGLSSSEDMQMQCELFSSSPGVNGGEAAAPAQQPVSSNGPAMFQPSSSAEGEEASGQGKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQAGGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSSQAEAQQPTIFHNSPQIQLVQGSPSSQDQQVTLFISSASMSALSVQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQPPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLPQQLPETPPLPPAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(888599..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907966))
location: region:888599-907966:-1
so has part: feature:907437-907966:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888599-888837:-1:exon

XP_016156628.1
type: Protein
SIO_000068: ncbiprotein

position:907966:-1
position: 907966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907437-907966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892415-892527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888599-888837:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X2
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIMVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNLEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGPTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPEPLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQPRDSQPREVLQSDGTVVTLSQLAEASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDPLNADIFQQVSQIQSGVNPGMFSSSDTAVHSRAENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAMVMGMQQNMCQAAPQMQSDLFSASTAGSGALQQSPVYQQASHMMGGLSSSEDMQMQCELFSSSPGVNGGEAAAPAQQPVSSNGPAMFQPSSSAEGEEASGQGKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQAGGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSSQAEAQQPTIFHNSPQIQLVQGSPSSQDQQVTLFISSASMSALSVQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQPPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLPQQLPETPPLPPAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(888599..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907966))
location: region:888599-907966:-1
so has part: feature:907437-907966:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888599-888837:-1:exon

XP_016156629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:907437-907966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892415-892527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888599-888837:-1:exon

NFAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NFAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor of activated T-cells 5 isoform X2
translation: MGGACSSFTTSSSPTIYSTSVTDSKAMQVESCSAAVGVSTRGVSEQQITSNTAQQHPATPKRHTVLYISPPPEDLLDNSRMSCQDEGCGLESEQSCSMWMEDSPSNFSNMSTSSYNDNTEVPRKSRKRNPKQRPGIKRRDCEESNMDIFDADSAKAPHYVLSQLSTDSKSNSKAGNGASENQKGAGGKKTPMLCGQYPTKSEGKELKIMVQPETQHRARYLTEGSRGSVKDRTQQGFPTVKLEGHNEPVVLQVFVGNDSGRVKPHGFYQACRVTGRNTTPCKEVDIEGTTVIEVGLDPSNNMTLAVDCVGILKLRNADVEARIGIAGSKKKSTRARLVFRVNITRKDGSTLTLQTPSSPILCTQPAGVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWKAEAEIDMELFHQNHLIVKVPPYHDQQITSAVSVGIYVVTNAGRSHDVQPFTYTPEPAGTLNVNVKKEISSPAQHCSFEEAIKAVKATGCNLEKVNILPSALITPLMPSSMIKNEDVAPMEASNVVGPTQQTLENSMSGISTSASHLPSESENQQQIQPKVYNPEPLSTIQTQDISQPGSFSAVSTPGQLQNSDALLQQAAQFQPRDSQPREVLQSDGTVVTLSQLAEASQQQQPTLSEPAQALQQQISSSIFSSASGVSQLQNTIQQLQAGNFPTNTATGSSRNVDLVQQVLEAQQQLSSVLFSGSDSSEDVQDPLNADIFQQVSQIQSGVNPGMFSSSDTAVHSRAENLLPGRAENVHSQPEGALSNQQQQQQQQQAMETSAMVMGMQQNMCQAAPQMQSDLFSASTAGSGALQQSPVYQQASHMMGGLSSSEDMQMQCELFSSSPGVNGGEAAAPAQQPVSSNGPAMFQPSSSAEGEEASGQGKQMQSSVFQTMVQMQHSGESQSQVNLFSSTKTMMSVQAGGTQQQGGGLFQQGGEMMSIQSGSFIQQSPHSQAQLFHSQNPIGDTQNISQETQGSLFHSSNSIVHNQTNTNSSDQLQPPMFHSQNAMGVLQSSSVPQDQQSANMFLSQSSMSNPATQEEQMSFFTSPNPISPLQTATNTEQQTSFQQQTQISHIQSSMLPQEQPQTQPAQQGLFQSQVSLGSIQSSSIPQNQQGAIFQPQHSIVAIQSSPPSQEQQQQQQQNMMFSNQNAMSTMASQKQNMIFNPNQNPVTNQEQQGQSIFHPQSNMASMNQEQQPMQFQSQTTVSPLQNPGSSQAEAQQPTIFHNSPQIQLVQGSPSSQDQQVTLFISSASMSALSVQNSMSQPELQQSPMYSSQNSMAGMPGTASPPQQQPPLFHNTAGGAINQLQNSPASSQQTSGIFLFGIQNNCGQLLPPGPAALPEELMAMGQPGQPQGEAQPAVPALLPQQLPETPPLPPAMATNQNMEKIDDLLVSLQNQGNNMAGSF
SIO_010081: NFAT5
subclass of: SO_0000673
so part of: NFAT5
location: complement(join(888599..888837,889457..891890,892415..892527,893381..893458,893993..894125,895793..895845,896016..896150,899143..899315,900115..900305,903260..903452,907437..907966))
location: region:888599-907966:-1
so has part: feature:907437-907966:-1:exon
so has part: feature:903260-903452:-1:exon
so has part: feature:900115-900305:-1:exon
so has part: feature:899143-899315:-1:exon
so has part: feature:896016-896150:-1:exon
so has part: feature:895793-895845:-1:exon
so has part: feature:893993-894125:-1:exon
so has part: feature:893381-893458:-1:exon
so has part: feature:892415-892527:-1:exon
so has part: feature:889457-891890:-1:exon
so has part: feature:888599-888837:-1:exon

XP_016156630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:907437-907966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903260-903452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900115-900305:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:899143-899315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:896016-896150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:895793-895845:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:893993-894125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:893381-893458:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:892415-892527:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889457-891890:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888599-888837:-1:exon

LOC101814420
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101814420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(943539..>947906)
location: region:943539-947906:-1
so has part: feature:943539-947906:-1:exon
subclass of: SO_0000010

101814420
type: Gene
SIO_000068: ncbigene

position:943539:-1
position: 943539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947906:-1
position: 947906
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943539-947906:-1:exon

LOC101814420
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101814420
product: cytochrome b5 type B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052279.2
SIO_010081: LOC101814420
subclass of: SO_0000673
so part of: LOC101814420
location: complement(join(943539..945076,945925..945956,947256..947282,947721..>947906))
location: region:943539-947906:-1
so has part: feature:947721-947906:-1:exon
so has part: feature:947256-947282:-1:exon
so has part: feature:945925-945956:-1:exon
so has part: feature:943539-945076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:947721-947906:-1:exon

position:947721:-1
position: 947721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:947256-947282:-1:exon

position:947256:-1
position: 947256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947282:-1
position: 947282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:945925-945956:-1:exon

position:945925:-1
position: 945925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945956:-1
position: 945956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:943539-945076:-1:exon

position:945076:-1
position: 945076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101814420
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101814420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b5 type B
translation: HPQCLSASSPWLTWTLLFQHPGGEEVLLEQAGRDATESFEDVGHSTDAREMLKQYYIGEVHPNDRGKEGSKNPSRTSSGQTSFWSTWLIPIFGALVLGLMYRYYMVDGKSS
SIO_010081: LOC101814420
subclass of: SO_0000673
so part of: LOC101814420
location: complement(join(944986..945076,945925..945956,947256..947282,947721..>947906))
location: region:944986-947906:-1
so has part: feature:947721-947906:-1:exon
so has part: feature:947256-947282:-1:exon
so has part: feature:945925-945956:-1:exon
so has part: feature:944986-945076:-1:exon

XP_005052336.1
type: Protein
SIO_000068: ncbiprotein

position:944986:-1
position: 944986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947721-947906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:947256-947282:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:945925-945956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:944986-945076:-1:exon

TERF2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 959377..964945
location: region:959377-964945:1
so has part: feature:959377-964945:1:exon
subclass of: SO_0000010

101814619
type: Gene
SIO_000068: ncbigene

position:959377:1
position: 959377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964945:1
position: 964945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959377-964945:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005052280.2
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(959377..959577,959657..959752,960182..960360,960550..960636,961157..961303,961498..961913,962346..962732,963196..963281,963533..963579,964031..964945)
location: region:959377-964945:1
so has part: feature:959377-959577:1:exon
so has part: feature:959657-959752:1:exon
so has part: feature:960182-960360:1:exon
so has part: feature:960550-960636:1:exon
so has part: feature:961157-961303:1:exon
so has part: feature:961498-961913:1:exon
so has part: feature:962346-962732:1:exon
so has part: feature:963196-963281:1:exon
so has part: feature:963533-963579:1:exon
so has part: feature:964031-964945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959377-959577:1:exon

position:959577:1
position: 959577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:959657-959752:1:exon

position:959657:1
position: 959657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:959752:1
position: 959752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:960182-960360:1:exon

position:960182:1
position: 960182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960360:1
position: 960360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:960550-960636:1:exon

position:960550:1
position: 960550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960636:1
position: 960636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:961157-961303:1:exon

position:961157:1
position: 961157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961303:1
position: 961303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:961498-961913:1:exon

position:961498:1
position: 961498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961913:1
position: 961913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:962346-962732:1:exon

position:962346:1
position: 962346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962732:1
position: 962732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:963196-963281:1:exon

position:963196:1
position: 963196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963281:1
position: 963281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:963533-963579:1:exon

position:963533:1
position: 963533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963579:1
position: 963579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:964031-964945:1:exon

position:964031:1
position: 964031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_016301215.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(959377..959577,959657..959752,960182..960360,960550..960636,961157..961303,961498..961913,962502..962732,963196..963281,963533..963579,964031..964945)
location: region:959377-964945:1
so has part: feature:959377-959577:1:exon
so has part: feature:959657-959752:1:exon
so has part: feature:960182-960360:1:exon
so has part: feature:960550-960636:1:exon
so has part: feature:961157-961303:1:exon
so has part: feature:961498-961913:1:exon
so has part: feature:962502-962732:1:exon
so has part: feature:963196-963281:1:exon
so has part: feature:963533-963579:1:exon
so has part: feature:964031-964945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959377-959577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959657-959752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960182-960360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960550-960636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961157-961303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:961498-961913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962502-962732:1:exon

position:962502:1
position: 962502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:963196-963281:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963533-963579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964031-964945:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_016301213.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(959377..959577,959657..959752,960182..960360,960550..960636,961160..961303,961498..961913,962346..962732,963196..963281,963533..963579,964031..964945)
location: region:959377-964945:1
so has part: feature:959377-959577:1:exon
so has part: feature:959657-959752:1:exon
so has part: feature:960182-960360:1:exon
so has part: feature:960550-960636:1:exon
so has part: feature:961160-961303:1:exon
so has part: feature:961498-961913:1:exon
so has part: feature:962346-962732:1:exon
so has part: feature:963196-963281:1:exon
so has part: feature:963533-963579:1:exon
so has part: feature:964031-964945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959377-959577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959657-959752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960182-960360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960550-960636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961160-961303:1:exon

position:961160:1
position: 961160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:961498-961913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962346-962732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963196-963281:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963533-963579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964031-964945:1:exon

TERF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TERF2
product: telomeric repeat binding factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016301214.1
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(959377..959577,959657..959752,960230..960360,960550..960636,961157..961303,961498..961913,962346..962732,963196..963281,963533..963579,964031..964945)
location: region:959377-964945:1
so has part: feature:959377-959577:1:exon
so has part: feature:959657-959752:1:exon
so has part: feature:960230-960360:1:exon
so has part: feature:960550-960636:1:exon
so has part: feature:961157-961303:1:exon
so has part: feature:961498-961913:1:exon
so has part: feature:962346-962732:1:exon
so has part: feature:963196-963281:1:exon
so has part: feature:963533-963579:1:exon
so has part: feature:964031-964945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959377-959577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959657-959752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960230-960360:1:exon

position:960230:1
position: 960230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:960550-960636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961157-961303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:961498-961913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962346-962732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963196-963281:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963533-963579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964031-964945:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X1
translation: MAALPEKTMNGWVLQFYFHRAIEAYRSGRNRDFRQFRDIMQALLVRPLNREPEMAQMLRIMQLLSRVEEGENLGKRRDPPPKVWMPILIDCTFDKESELTPLESAMLVLDFIHEEFSVADKTMEAVQKMVKEAAVVVCIRNKEFEKAADIVKKHMGKEPRNQKKRNEWLAVIRDKNPSHPKVKNFSYEDFQQSIFDFLKGYMDESEPALLTLLKKTLSSEHVDKAKSSLETSEFADGLKDQAAAPEALGRAEGPAKAPENAGATEDLEGAASPAKRAAGPIAAPEMMEEASGPAAALEPMEDITDPAATPEHLTAAYDILKGAPESMEIAKEPAAATPELPRVSTREPQRQPPGAVTSCGISVLREAFKILSDSGDPDALFTQLDETDLPSPKQLSPSVSHRTKRCREVENQASETSEPPEMPRNVKKLFSISNLVVELDGSSSKSGECPDSSQEHVVSSASKPAPKLPDEPLAAQSEKSIQGRWNSSCGTEEKDSWSDEDELFANAASLEKSNVSRNSSKKQKWTMQESEWIKEGVQKYGEGRWKAICLKYPFQNRTSVMIKDRWRTMKKLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(959454..959577,959657..959752,960182..960360,960550..960636,961157..961303,961498..961913,962346..962732,963196..963281,963533..963579,964031..964189)
location: region:959454-964189:1
so has part: feature:959454-959577:1:exon
so has part: feature:959657-959752:1:exon
so has part: feature:960182-960360:1:exon
so has part: feature:960550-960636:1:exon
so has part: feature:961157-961303:1:exon
so has part: feature:961498-961913:1:exon
so has part: feature:962346-962732:1:exon
so has part: feature:963196-963281:1:exon
so has part: feature:963533-963579:1:exon
so has part: feature:964031-964189:1:exon

XP_005052337.2
type: Protein
SIO_000068: ncbiprotein

position:959454:1
position: 959454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964189:1
position: 964189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959454-959577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959657-959752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960182-960360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960550-960636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961157-961303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:961498-961913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962346-962732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963196-963281:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963533-963579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964031-964189:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X4
translation: MAALPEKTMNGWVLQFYFHRAIEAYRSGRNRDFRQFRDIMQALLVRPLNREPEMAQMLRIMQLLSRVEEGENLGKRRDPPPKVWMPILIDCTFDKESELTPLESAMLVLDFIHEEFSVADKTMEAVQKMVKEAAVVVCIRNKEFEKAADIVKKHMGKEPRNQKKRNEWLAVIRDKNPSHPKVKNFSYEDFQQSIFDFLKGYMDESEPALLTLLKKTLSSEHVDKAKSSLETSEFADGLKDQAAAPEALGRAEGPAKAPENAGATEDLEGAASPAKRAAGPIAAPEMMEEASGPAAALEPMEDITDPAATPEHLTAAYDILKGAPESMEIAKEPAAATPELPRVSTREPQRTKRCREVENQASETSEPPEMPRNVKKLFSISNLVVELDGSSSKSGECPDSSQEHVVSSASKPAPKLPDEPLAAQSEKSIQGRWNSSCGTEEKDSWSDEDELFANAASLEKSNVSRNSSKKQKWTMQESEWIKEGVQKYGEGRWKAICLKYPFQNRTSVMIKDRWRTMKKLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(959454..959577,959657..959752,960182..960360,960550..960636,961157..961303,961498..961913,962502..962732,963196..963281,963533..963579,964031..964189)
location: region:959454-964189:1
so has part: feature:959454-959577:1:exon
so has part: feature:959657-959752:1:exon
so has part: feature:960182-960360:1:exon
so has part: feature:960550-960636:1:exon
so has part: feature:961157-961303:1:exon
so has part: feature:961498-961913:1:exon
so has part: feature:962502-962732:1:exon
so has part: feature:963196-963281:1:exon
so has part: feature:963533-963579:1:exon
so has part: feature:964031-964189:1:exon

XP_016156701.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:959454-959577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959657-959752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960182-960360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960550-960636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961157-961303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:961498-961913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962502-962732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963196-963281:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963533-963579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964031-964189:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X2
translation: MAALPEKTMNGWVLQFYFHRAIEAYRSGRNRDFRQFRDIMQALLVRPLNREPEMAQMLRIMQLLSRVEEGENLGKRRDPPPKVWMPILIDCTFDKESELTPLESAMLVLDFIHEEFSVADKTMEAVQKMVKEAAVVVCIRNKEFEKAADIVKKHMGKEPRNQKRNEWLAVIRDKNPSHPKVKNFSYEDFQQSIFDFLKGYMDESEPALLTLLKKTLSSEHVDKAKSSLETSEFADGLKDQAAAPEALGRAEGPAKAPENAGATEDLEGAASPAKRAAGPIAAPEMMEEASGPAAALEPMEDITDPAATPEHLTAAYDILKGAPESMEIAKEPAAATPELPRVSTREPQRQPPGAVTSCGISVLREAFKILSDSGDPDALFTQLDETDLPSPKQLSPSVSHRTKRCREVENQASETSEPPEMPRNVKKLFSISNLVVELDGSSSKSGECPDSSQEHVVSSASKPAPKLPDEPLAAQSEKSIQGRWNSSCGTEEKDSWSDEDELFANAASLEKSNVSRNSSKKQKWTMQESEWIKEGVQKYGEGRWKAICLKYPFQNRTSVMIKDRWRTMKKLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(959454..959577,959657..959752,960182..960360,960550..960636,961160..961303,961498..961913,962346..962732,963196..963281,963533..963579,964031..964189)
location: region:959454-964189:1
so has part: feature:959454-959577:1:exon
so has part: feature:959657-959752:1:exon
so has part: feature:960182-960360:1:exon
so has part: feature:960550-960636:1:exon
so has part: feature:961160-961303:1:exon
so has part: feature:961498-961913:1:exon
so has part: feature:962346-962732:1:exon
so has part: feature:963196-963281:1:exon
so has part: feature:963533-963579:1:exon
so has part: feature:964031-964189:1:exon

XP_016156699.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:959454-959577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959657-959752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960182-960360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960550-960636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961160-961303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:961498-961913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962346-962732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963196-963281:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963533-963579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964031-964189:1:exon

TERF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TERF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomeric repeat-binding factor 2 isoform X3
translation: MAALPEKTMNGWVLQFYFHRAIEAYRSGRNRDFRQFRDIMQALLVRPLNREPEMAQMLRIMQLLSRVEEGENLDCTFDKESELTPLESAMLVLDFIHEEFSVADKTMEAVQKMVKEAAVVVCIRNKEFEKAADIVKKHMGKEPRNQKKRNEWLAVIRDKNPSHPKVKNFSYEDFQQSIFDFLKGYMDESEPALLTLLKKTLSSEHVDKAKSSLETSEFADGLKDQAAAPEALGRAEGPAKAPENAGATEDLEGAASPAKRAAGPIAAPEMMEEASGPAAALEPMEDITDPAATPEHLTAAYDILKGAPESMEIAKEPAAATPELPRVSTREPQRQPPGAVTSCGISVLREAFKILSDSGDPDALFTQLDETDLPSPKQLSPSVSHRTKRCREVENQASETSEPPEMPRNVKKLFSISNLVVELDGSSSKSGECPDSSQEHVVSSASKPAPKLPDEPLAAQSEKSIQGRWNSSCGTEEKDSWSDEDELFANAASLEKSNVSRNSSKKQKWTMQESEWIKEGVQKYGEGRWKAICLKYPFQNRTSVMIKDRWRTMKKLGML
SIO_010081: TERF2
subclass of: SO_0000673
so part of: TERF2
location: join(959454..959577,959657..959752,960230..960360,960550..960636,961157..961303,961498..961913,962346..962732,963196..963281,963533..963579,964031..964189)
location: region:959454-964189:1
so has part: feature:959454-959577:1:exon
so has part: feature:959657-959752:1:exon
so has part: feature:960230-960360:1:exon
so has part: feature:960550-960636:1:exon
so has part: feature:961157-961303:1:exon
so has part: feature:961498-961913:1:exon
so has part: feature:962346-962732:1:exon
so has part: feature:963196-963281:1:exon
so has part: feature:963533-963579:1:exon
so has part: feature:964031-964189:1:exon

XP_016156700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:959454-959577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:959657-959752:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:960230-960360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:960550-960636:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:961157-961303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:961498-961913:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962346-962732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963196-963281:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963533-963579:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:964031-964189:1:exon

TMED6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 965632..967713
location: region:965632-967713:1
so has part: feature:965632-967713:1:exon
subclass of: SO_0000010

101821465
type: Gene
SIO_000068: ncbigene

position:965632:1
position: 965632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967713:1
position: 967713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965632-967713:1:exon

TMED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMED6
product: transmembrane p24 trafficking protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005052225.2
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(965632..965832,966548..966674,966932..967083,967203..967713)
location: region:965632-967713:1
so has part: feature:965632-965832:1:exon
so has part: feature:966548-966674:1:exon
so has part: feature:966932-967083:1:exon
so has part: feature:967203-967713:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:965632-965832:1:exon

position:965832:1
position: 965832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:966548-966674:1:exon

position:966548:1
position: 966548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966674:1
position: 966674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:966932-967083:1:exon

position:966932:1
position: 966932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967083:1
position: 967083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:967203-967713:1:exon

position:967203:1
position: 967203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TMED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane emp24 domain-containing protein 6
translation: MLLLLLLALLGPAGCPRTEPLSGSSQEPLFRGADRYDFAVVIPAGSVECFWQFSHQGGNFFFSYEVQRATGIGNSRNILVTASDPNGFQLGVSQDVRGQINFLTKDTGFYQLCLDNQQNHFGLVQVYLNFGVYYDDFNMEHKEPAERKELNDTLEAIGVSIQRLQIHTFHMWRFYNFARMRKGADSFLLESNYNYVNWWSMAQSCVIVLSGLLQLYFLKRLFHAQTSGSQKC
SIO_010081: TMED6
subclass of: SO_0000673
so part of: TMED6
location: join(965638..965832,966548..966674,966932..967083,967203..967427)
location: region:965638-967427:1
so has part: feature:965638-965832:1:exon
so has part: feature:966548-966674:1:exon
so has part: feature:966932-967083:1:exon
so has part: feature:967203-967427:1:exon

XP_005052282.1
type: Protein
SIO_000068: ncbiprotein

position:965638:1
position: 965638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967427:1
position: 967427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965638-965832:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:966548-966674:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:966932-967083:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:967203-967427:1:exon

NIP7
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(967888..969004)
location: region:967888-969004:-1
so has part: feature:967888-969004:-1:exon
subclass of: SO_0000010

101814815
type: Gene
SIO_000068: ncbigene

position:967888:-1
position: 967888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969004:-1
position: 969004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967888-969004:-1:exon

NIP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NIP7
product: NIP7, nucleolar pre-rRNA processing protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052281.2
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(967888..968207,968306..968446,968522..968660,968737..968879,968987..969004))
location: region:967888-969004:-1
so has part: feature:968987-969004:-1:exon
so has part: feature:968737-968879:-1:exon
so has part: feature:968522-968660:-1:exon
so has part: feature:968306-968446:-1:exon
so has part: feature:967888-968207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:968987-969004:-1:exon

position:968987:-1
position: 968987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:968737-968879:-1:exon

position:968737:-1
position: 968737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968879:-1
position: 968879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:968522-968660:-1:exon

position:968522:-1
position: 968522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968660:-1
position: 968660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:968306-968446:-1:exon

position:968306:-1
position: 968306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968446:-1
position: 968446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:967888-968207:-1:exon

position:968207:-1
position: 968207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NIP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NIP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosome subunit biogenesis protein NIP7 homolog
translation: MGTRDRPARSGTGRAGRAHGVCPCSIGENIQLLVDRPDGTYCFRLHRDRVYYLSEKLLKLAASIPRESLVAPGTCFGKFTKSQKFRLSVTALDFLAPYAKYKVWVKPGSEQSFLYGNHVLKSGLGRITENTAQYQGVVVYSMADVPLGFGVAAKSTQECRKVDPLAIVVFHQADVGEYVRNEDTLT
SIO_010081: NIP7
subclass of: SO_0000673
so part of: NIP7
location: complement(join(968088..968207,968306..968446,968522..968660,968737..968879,968987..969004))
location: region:968088-969004:-1
so has part: feature:968987-969004:-1:exon
so has part: feature:968737-968879:-1:exon
so has part: feature:968522-968660:-1:exon
so has part: feature:968306-968446:-1:exon
so has part: feature:968088-968207:-1:exon

XP_005052338.1
type: Protein
SIO_000068: ncbiprotein

position:968088:-1
position: 968088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968987-969004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:968737-968879:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:968522-968660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968306-968446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968088-968207:-1:exon

COG8
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 969997..974483
location: region:969997-974483:1
so has part: feature:969997-974483:1:exon
subclass of: SO_0000010

101815020
type: Gene
SIO_000068: ncbigene

position:969997:1
position: 969997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974483:1
position: 974483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969997-974483:1:exon

COG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: COG8
product: component of oligomeric golgi complex 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052282.2
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(969997..970173,970229..970294,970372..971190,971793..971961,972087..972119,973096..973395,973678..974483)
location: region:969997-974483:1
so has part: feature:969997-970173:1:exon
so has part: feature:970229-970294:1:exon
so has part: feature:970372-971190:1:exon
so has part: feature:971793-971961:1:exon
so has part: feature:972087-972119:1:exon
so has part: feature:973096-973395:1:exon
so has part: feature:973678-974483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:969997-970173:1:exon

position:970173:1
position: 970173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:970229-970294:1:exon

position:970229:1
position: 970229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970294:1
position: 970294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:970372-971190:1:exon

position:970372:1
position: 970372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971190:1
position: 971190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:971793-971961:1:exon

position:971793:1
position: 971793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971961:1
position: 971961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:972087-972119:1:exon

position:972087:1
position: 972087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972119:1
position: 972119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:973096-973395:1:exon

position:973096:1
position: 973096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973395:1
position: 973395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:973678-974483:1:exon

position:973678:1
position: 973678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: COG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: conserved oligomeric Golgi complex subunit 8
translation: MPSRPRRTFMRDAEAIACSRRMNSLTLNRHTEILEILEIPQLMDTCVRNGYYEETLELTAYVRRLERKHSSIPVIQGIVDEVRQSAQLMLTQLIQQLRTNIPLPACLRLIGFLRRMDVLTEAELRLKFLQARDAWLRSIHASIPEHDPYLHITKTIEACRVHLFDVITQYRAIFSDEEPLVPAEGAAPAEGAIFHGWVLQKVSEFLRTLQRDLERGVGGRLDSLLGQCMYFGLSFSRVGVDFRGQLAPLFQRVAAEAFRKAVEEAVEKFREEMNSYTLISAPAVLGGSAAVPVPTAQPGTLQPPMVLLDFPPLACFLNGLLVAFNDLRLCCPIALAQDVTACLDSALGEVTKTILAFHRAEEAAFSGREQELFIQFCTAFLEDLLPFLNRCLQVLFPPAQIAQALGVPPTQLQRFGPRRLAAALAAGLRSRPCLGLSAPQLGVPLRVFAAELPPARCARYPPALRQAHGIEPFPLRVLVNPALRVLDTRLVTGPEGCASIHGFSAYVPRHWAVHVSGVDECGVPVSWEASGWAARIIQHEMDHLDGILYIDRMDPRTFTNVSWMELLD
SIO_010081: COG8
subclass of: SO_0000673
so part of: COG8
location: join(970012..970173,970229..970294,970372..971190,971793..971961,972087..972119,973096..973395,973678..973835)
location: region:970012-973835:1
so has part: feature:970012-970173:1:exon
so has part: feature:970229-970294:1:exon
so has part: feature:970372-971190:1:exon
so has part: feature:971793-971961:1:exon
so has part: feature:972087-972119:1:exon
so has part: feature:973096-973395:1:exon
so has part: feature:973678-973835:1:exon

XP_005052339.1
type: Protein
SIO_000068: ncbiprotein

position:970012:1
position: 970012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973835:1
position: 973835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970012-970173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970229-970294:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970372-971190:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:971793-971961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:972087-972119:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:973096-973395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:973678-973835:1:exon

VPS4A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(973919..980692)
location: region:973919-980692:-1
so has part: feature:973919-980692:-1:exon
subclass of: SO_0000010

101821669
type: Gene
SIO_000068: ncbigene

position:973919:-1
position: 973919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980692:-1
position: 980692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:973919-980692:-1:exon

VPS4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: VPS4A
product: vacuolar protein sorting 4 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301048.1
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(973919..974789,975076..975216,975305..975524,975600..975681,975776..975924,976585..976741,976854..976973,977265..977326,977414..977561,977632..977788,980402..980537,980658..980692))
location: region:973919-980692:-1
so has part: feature:980658-980692:-1:exon
so has part: feature:980402-980537:-1:exon
so has part: feature:977632-977788:-1:exon
so has part: feature:977414-977561:-1:exon
so has part: feature:977265-977326:-1:exon
so has part: feature:976854-976973:-1:exon
so has part: feature:976585-976741:-1:exon
so has part: feature:975776-975924:-1:exon
so has part: feature:975600-975681:-1:exon
so has part: feature:975305-975524:-1:exon
so has part: feature:975076-975216:-1:exon
so has part: feature:973919-974789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:980658-980692:-1:exon

position:980658:-1
position: 980658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:980402-980537:-1:exon

position:980402:-1
position: 980402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980537:-1
position: 980537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:977632-977788:-1:exon

position:977632:-1
position: 977632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977788:-1
position: 977788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:977414-977561:-1:exon

position:977414:-1
position: 977414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977561:-1
position: 977561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:977265-977326:-1:exon

position:977265:-1
position: 977265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977326:-1
position: 977326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:976854-976973:-1:exon

position:976854:-1
position: 976854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976973:-1
position: 976973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:976585-976741:-1:exon

position:976585:-1
position: 976585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976741:-1
position: 976741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:975776-975924:-1:exon

position:975776:-1
position: 975776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975924:-1
position: 975924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:975600-975681:-1:exon

position:975600:-1
position: 975600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975681:-1
position: 975681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:975305-975524:-1:exon

position:975305:-1
position: 975305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975524:-1
position: 975524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:975076-975216:-1:exon

position:975076:-1
position: 975076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975216:-1
position: 975216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:973919-974789:-1:exon

position:974789:-1
position: 974789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: VPS4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 4A
translation: MPPSSDPLVSQSSHTLGVGGPSEGHSGTGLQGSPSFWKPSAPRPNCRTVLCFGGAVLGLRRAPVLTALPPSQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHNDKAKESIRAKCMQYLDRAEKLKEYLRSKDRHGKRPVREAQNDNKGSDSDSEGENPEKKKLQEQLMGAIMMEKPNVRWSDVAGLEAAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIALPDEAARAQMFRLHLGNTPHSLTDANIQELARKTERYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRTTPGALVDDLLTPCSPGDPGAMEMTWMEVPSDKLMEPIVCMSDMLRSLATTRPTVNDEDLLKVKKFTEDFGQEG
SIO_010081: VPS4A
subclass of: SO_0000673
so part of: VPS4A
location: complement(join(974688..974789,975076..975216,975305..975524,975600..975681,975776..975924,976585..976741,976854..976973,977265..977326,977414..977561,977632..977788,980402..980537,980658..980692))
location: region:974688-980692:-1
so has part: feature:980658-980692:-1:exon
so has part: feature:980402-980537:-1:exon
so has part: feature:977632-977788:-1:exon
so has part: feature:977414-977561:-1:exon
so has part: feature:977265-977326:-1:exon
so has part: feature:976854-976973:-1:exon
so has part: feature:976585-976741:-1:exon
so has part: feature:975776-975924:-1:exon
so has part: feature:975600-975681:-1:exon
so has part: feature:975305-975524:-1:exon
so has part: feature:975076-975216:-1:exon
so has part: feature:974688-974789:-1:exon

XP_016156534.1
type: Protein
SIO_000068: ncbiprotein

position:974688:-1
position: 974688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980658-980692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:980402-980537:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977632-977788:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977414-977561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:977265-977326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976854-976973:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976585-976741:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:975776-975924:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975600-975681:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:975305-975524:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:975076-975216:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:974688-974789:-1:exon

SNTB2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(980294..987379)
location: region:980294-987379:-1
so has part: feature:980294-987379:-1:exon
subclass of: SO_0000010

101821871
type: Gene
SIO_000068: ncbigene

position:980294:-1
position: 980294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987379:-1
position: 987379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980294-987379:-1:exon

SNTB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SNTB2
product: syntrophin beta 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052227.2
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(980294..981300,981494..981675,981753..981949,982047..982189,982630..982840,983241..983451,986941..987379))
location: region:980294-987379:-1
so has part: feature:986941-987379:-1:exon
so has part: feature:983241-983451:-1:exon
so has part: feature:982630-982840:-1:exon
so has part: feature:982047-982189:-1:exon
so has part: feature:981753-981949:-1:exon
so has part: feature:981494-981675:-1:exon
so has part: feature:980294-981300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:986941-987379:-1:exon

position:986941:-1
position: 986941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:983241-983451:-1:exon

position:983241:-1
position: 983241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983451:-1
position: 983451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:982630-982840:-1:exon

position:982630:-1
position: 982630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982840:-1
position: 982840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:982047-982189:-1:exon

position:982047:-1
position: 982047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982189:-1
position: 982189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:981753-981949:-1:exon

position:981753:-1
position: 981753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981949:-1
position: 981949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:981494-981675:-1:exon

position:981494:-1
position: 981494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981675:-1
position: 981675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:980294-981300:-1:exon

position:981300:-1
position: 981300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNTB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SNTB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-syntrophin
translation: MAVWTRACKTGLLELLLRERWVRVSAELTGETLSLTAEPGTGDPSVVNGVVNGNAEAAAPGGVRRVRVVKAEAGGLGISIKGGRENRMPVLISRIFPGLAAERSGALRLGDAILAVNGVDLRDATHDQAVQALKRAGREVILEVKFMREVTPYIKKPSLVSDLPWEGAAPQSPSLSGSEDSGSPQHQGPRDRKVIPLKMCFAARNLSMPDLENRLIELHSPDSRNTLVLRCRDTATAHAWFSALHANITALLPQVLAELNATLGSGSPPAGGREVKHIAWLAEQARLDGGRQQWRPVLMAVTEKDLLLYDGMPWTRDAWASPCHSYPLVATRLVHSGSGRRSPALGSELTFATRTGSRQGVEMHVFRVETHRDLSAWTRVLVQGCHAAAELIKEVTVGCTLGGQEVQLSIHYEGGFTISRDEPGSSVLFRYPYERLKMSADDGIRTLYLDFGGPEGELALDLHSCPKPIVFVLHTFLSAKVTRMGLLA
SIO_010081: SNTB2
subclass of: SO_0000673
so part of: SNTB2
location: complement(join(981208..981300,981494..981675,981753..981949,982047..982189,982630..982840,983241..983451,986941..987370))
location: region:981208-987370:-1
so has part: feature:986941-987370:-1:exon
so has part: feature:983241-983451:-1:exon
so has part: feature:982630-982840:-1:exon
so has part: feature:982047-982189:-1:exon
so has part: feature:981753-981949:-1:exon
so has part: feature:981494-981675:-1:exon
so has part: feature:981208-981300:-1:exon

XP_005052284.1
type: Protein
SIO_000068: ncbiprotein

position:981208:-1
position: 981208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987370:-1
position: 987370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986941-987370:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983241-983451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982630-982840:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982047-982189:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:981753-981949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:981494-981675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:981208-981300:-1:exon

UTP4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(988331..>994151)
location: region:988331-994151:-1
so has part: feature:988331-994151:-1:exon
subclass of: SO_0000010

101815221
type: Gene
SIO_000068: ncbigene

position:988331:-1
position: 988331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994151:-1
position: 994151
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988331-994151:-1:exon

UTP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: UTP4
product: UTP4, small subunit processome component
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301049.1
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(988331..988552,989014..989124,989203..989388,989535..989630,989847..989953,990179..990338,990509..990631,990731..990795,990968..991064,991417..991508,991589..991760,991877..992085,993251..993340,993431..993528,993648..993826,994083..>994151))
location: region:988331-994151:-1
so has part: feature:994083-994151:-1:exon
so has part: feature:993648-993826:-1:exon
so has part: feature:993431-993528:-1:exon
so has part: feature:993251-993340:-1:exon
so has part: feature:991877-992085:-1:exon
so has part: feature:991589-991760:-1:exon
so has part: feature:991417-991508:-1:exon
so has part: feature:990968-991064:-1:exon
so has part: feature:990731-990795:-1:exon
so has part: feature:990509-990631:-1:exon
so has part: feature:990179-990338:-1:exon
so has part: feature:989847-989953:-1:exon
so has part: feature:989535-989630:-1:exon
so has part: feature:989203-989388:-1:exon
so has part: feature:989014-989124:-1:exon
so has part: feature:988331-988552:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:994083-994151:-1:exon

position:994083:-1
position: 994083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:993648-993826:-1:exon

position:993648:-1
position: 993648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993826:-1
position: 993826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:993431-993528:-1:exon

position:993431:-1
position: 993431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993528:-1
position: 993528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:993251-993340:-1:exon

position:993251:-1
position: 993251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993340:-1
position: 993340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:991877-992085:-1:exon

position:991877:-1
position: 991877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992085:-1
position: 992085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:991589-991760:-1:exon

position:991589:-1
position: 991589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991760:-1
position: 991760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:991417-991508:-1:exon

position:991417:-1
position: 991417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991508:-1
position: 991508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:990968-991064:-1:exon

position:990968:-1
position: 990968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991064:-1
position: 991064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:990731-990795:-1:exon

position:990731:-1
position: 990731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990795:-1
position: 990795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:990509-990631:-1:exon

position:990509:-1
position: 990509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990631:-1
position: 990631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:990179-990338:-1:exon

position:990179:-1
position: 990179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990338:-1
position: 990338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:989847-989953:-1:exon

position:989847:-1
position: 989847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989953:-1
position: 989953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:989535-989630:-1:exon

position:989535:-1
position: 989535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989630:-1
position: 989630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:989203-989388:-1:exon

position:989203:-1
position: 989203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989388:-1
position: 989388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:989014-989124:-1:exon

position:989014:-1
position: 989014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:989124:-1
position: 989124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:988331-988552:-1:exon

position:988552:-1
position: 988552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UTP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: UTP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-associated protein 4 homolog
translation: GALARADGAVEVYNFAANYFQEKVIPGHESRSVESLCWAAGDRLFGAGLSGDITEYDLSGLSAARGVDGGGGPIGGGGGGGGGRPPQIGCEDGSVKIFQVVPGGIQFERNLDRRKGRVLCLSWHPSGTHIVAGSIDFFRVIDVASGQTVQRIMVNHHVEKAKRECVVWAIALLSSGTVVSADSFGRVQFWDWELGTLAESHTVSTSAALSLAVSEKEDSIIVGTSTGATYQLQLLPVNLGGQEKRWVRTKPFQFHSHDVRAVAHSPTALISGGLDAQLVIRPLMEKMQKKGYDAVLRKFTFPHRRLVSCARKARLLLFQFSQYLELWRLGSTEETGKDGEVLSLCRMPEHLVQLKSKGPEHIYCSCVSPCGTWIGYSTASRFHLYRVRCDGDGVSLRKVPKVPKLLPPAYQLQFSANSDSLFVASARGSVHVFQLLEPGGCKHLHTLQPPSGCSEAVYLLAPSADGHWLAAVSGDWAIHIYNLKCFKHHCMVPAYNCAVSALAIHPSTNNLVIAYSDQQLLEFSIPEKQYTSWSRAVQSRGLHRAWLERDSPITHITFNPKNPAHILLHDTYLLCVLDKSLPLPDDSTLLMNQSTLKQLPETARKRQLHAFKICKKFQPLLFMDLLDENCLVVVERPIMDFKTQLPLPVQQKKFGT
SIO_010081: UTP4
subclass of: SO_0000673
so part of: UTP4
location: complement(join(988436..988552,989014..989124,989203..989388,989535..989630,989847..989953,990179..990338,990509..990631,990731..990795,990968..991064,991417..991508,991589..991760,991877..992085,993251..993340,993431..993528,993648..993826,994083..>994151))
location: region:988436-994151:-1
so has part: feature:994083-994151:-1:exon
so has part: feature:993648-993826:-1:exon
so has part: feature:993431-993528:-1:exon
so has part: feature:993251-993340:-1:exon
so has part: feature:991877-992085:-1:exon
so has part: feature:991589-991760:-1:exon
so has part: feature:991417-991508:-1:exon
so has part: feature:990968-991064:-1:exon
so has part: feature:990731-990795:-1:exon
so has part: feature:990509-990631:-1:exon
so has part: feature:990179-990338:-1:exon
so has part: feature:989847-989953:-1:exon
so has part: feature:989535-989630:-1:exon
so has part: feature:989203-989388:-1:exon
so has part: feature:989014-989124:-1:exon
so has part: feature:988436-988552:-1:exon

XP_016156535.1
type: Protein
SIO_000068: ncbiprotein

position:988436:-1
position: 988436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:994083-994151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:993648-993826:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:993431-993528:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:993251-993340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:991877-992085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:991589-991760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:991417-991508:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:990968-991064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990731-990795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:990509-990631:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990179-990338:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:989847-989953:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:989535-989630:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:989203-989388:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:989014-989124:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988436-988552:-1:exon

CHTF8
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 995202..996475
location: region:995202-996475:1
so has part: feature:995202-996475:1:exon
subclass of: SO_0000010

101822261
type: Gene
SIO_000068: ncbigene

position:995202:1
position: 995202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:996475:1
position: 996475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995202-996475:1:exon

CHTF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHTF8
product: chromosome transmission fidelity factor 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005052229.2
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(995202..995412,995489..995606,995680..996475)
location: region:995202-996475:1
so has part: feature:995202-995412:1:exon
so has part: feature:995489-995606:1:exon
so has part: feature:995680-996475:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:995202-995412:1:exon

position:995412:1
position: 995412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:995489-995606:1:exon

position:995489:1
position: 995489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995606:1
position: 995606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:995680-996475:1:exon

position:995680:1
position: 995680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHTF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHTF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chromosome transmission fidelity protein 8 homolog
translation: MDLWICGLRTGSVHRGGSMGPRGRISSWGPQKGRARGSCSPTHPPALNVSLQPLAEPSMVQIVISSAGTGALAQWVLVELQGEVQPRQSGDLAGSLLGDLHYTCEGVPVLIVGHHILYGKVVQLEKPFAVLVKQGGAPQPSPTAPHGHYTVTALIKTKLLFKTRPKPIITHVPKKV
SIO_010081: CHTF8
subclass of: SO_0000673
so part of: CHTF8
location: join(995216..995412,995489..995606,995680..995895)
location: region:995216-995895:1
so has part: feature:995216-995412:1:exon
so has part: feature:995489-995606:1:exon
so has part: feature:995680-995895:1:exon

XP_005052286.1
type: Protein
SIO_000068: ncbiprotein

position:995216:1
position: 995216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995895:1
position: 995895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:995216-995412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:995489-995606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:995680-995895:1:exon

HAS3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(996563..999877)
location: region:996563-999877:-1
so has part: feature:996563-999877:-1:exon
subclass of: SO_0000010

101822065
type: Gene
SIO_000068: ncbigene

position:996563:-1
position: 996563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999877:-1
position: 999877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:996563-999877:-1:exon

HAS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HAS3
product: hyaluronan synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052228.2
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(996563..998321,998423..998524,999257..999877))
location: region:996563-999877:-1
so has part: feature:999257-999877:-1:exon
so has part: feature:998423-998524:-1:exon
so has part: feature:996563-998321:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:999257-999877:-1:exon

position:999257:-1
position: 999257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:998423-998524:-1:exon

position:998423:-1
position: 998423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998524:-1
position: 998524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:996563-998321:-1:exon

position:998321:-1
position: 998321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HAS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan synthase 3
translation: MPGSLSTALRVVGTSLFAVAVLGGILAAYVTGYQFIHTEKHYLSFGLYGAILGLHLFIQSLFAFLEHRRMRGEGQPVRPGRSVALCIAAFQEDPDYLTKCLRSVKRIAFPDLKVVMVVDGNGPDDTYMLDIFHDVMGSERSGSYIWKSNFHAQGEGETEAGLREGLARVQALVRSNTYSCILQKWGGKREVMYTAFRALGDSVDYIQVCDSDTVLDPACTAEMLRILEADPHVGGVGGDVQILNKYDSWLSFLSSVRYWMAFNVERACQSYFGCVQCISGPLGMYRNALLQQFLEDWYHQTFLGSKCSFGDDRHLTNRVLSLGYQTKYTARSKCLTETPTRYLRWLNQQTRWSKSYFREWLYNALWFHKHHLWMTYESVVTGFFPFFLIATVIQLFYRGRVWNILLFLLTVQLVGVIKATYACFLRGSAEMIFMSLYALLYMSSLLPAKIFAIATINKSGWGTSGRRTIVVNFVGLLPVSVWVAVLLGGLAYNAYSQDLFSETEVAFLVSGAILYACYWVALLTLYLAIVARRCGKRQEQCGLVFTEV
SIO_010081: HAS3
subclass of: SO_0000673
so part of: HAS3
location: complement(join(997398..998321,998423..998524,999257..999877))
location: region:997398-999877:-1
so has part: feature:999257-999877:-1:exon
so has part: feature:998423-998524:-1:exon
so has part: feature:997398-998321:-1:exon

XP_005052285.1
type: Protein
SIO_000068: ncbiprotein

position:997398:-1
position: 997398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999257-999877:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:998423-998524:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:997398-998321:-1:exon

TANGO6
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1003183..>1024034)
location: region:1003183-1024034:-1
so has part: feature:1003183-1024034:-1:exon
subclass of: SO_0000010

101815422
type: Gene
SIO_000068: ncbigene

position:1003183:-1
position: 1003183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024034:-1
position: 1024034
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003183-1024034:-1:exon

TANGO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TANGO6
product: transport and golgi organization 6 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052284.1
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1003183..1003490,1004541..1004654,1005549..1005700,1007623..1007775,1009145..1009202,1009375..1009848,1011128..1011182,1011506..1011585,1015133..1015312,1015847..1015973,1017511..1017687,1018972..1019084,1020612..1020694,1021193..1021355,1021860..1021984,1022699..1022825,1023575..1023691,1023891..>1024034))
location: region:1003183-1024034:-1
so has part: feature:1023891-1024034:-1:exon
so has part: feature:1023575-1023691:-1:exon
so has part: feature:1022699-1022825:-1:exon
so has part: feature:1021860-1021984:-1:exon
so has part: feature:1021193-1021355:-1:exon
so has part: feature:1020612-1020694:-1:exon
so has part: feature:1018972-1019084:-1:exon
so has part: feature:1017511-1017687:-1:exon
so has part: feature:1015847-1015973:-1:exon
so has part: feature:1015133-1015312:-1:exon
so has part: feature:1011506-1011585:-1:exon
so has part: feature:1011128-1011182:-1:exon
so has part: feature:1009375-1009848:-1:exon
so has part: feature:1009145-1009202:-1:exon
so has part: feature:1007623-1007775:-1:exon
so has part: feature:1005549-1005700:-1:exon
so has part: feature:1004541-1004654:-1:exon
so has part: feature:1003183-1003490:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023891-1024034:-1:exon

position:1023891:-1
position: 1023891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1023575-1023691:-1:exon

position:1023575:-1
position: 1023575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023691:-1
position: 1023691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1022699-1022825:-1:exon

position:1022699:-1
position: 1022699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022825:-1
position: 1022825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1021860-1021984:-1:exon

position:1021860:-1
position: 1021860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021984:-1
position: 1021984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1021193-1021355:-1:exon

position:1021193:-1
position: 1021193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021355:-1
position: 1021355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1020612-1020694:-1:exon

position:1020612:-1
position: 1020612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020694:-1
position: 1020694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1018972-1019084:-1:exon

position:1018972:-1
position: 1018972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019084:-1
position: 1019084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1017511-1017687:-1:exon

position:1017511:-1
position: 1017511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017687:-1
position: 1017687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1015847-1015973:-1:exon

position:1015847:-1
position: 1015847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015973:-1
position: 1015973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1015133-1015312:-1:exon

position:1015133:-1
position: 1015133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015312:-1
position: 1015312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1011506-1011585:-1:exon

position:1011506:-1
position: 1011506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011585:-1
position: 1011585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1011128-1011182:-1:exon

position:1011128:-1
position: 1011128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011182:-1
position: 1011182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1009375-1009848:-1:exon

position:1009375:-1
position: 1009375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009848:-1
position: 1009848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1009145-1009202:-1:exon

position:1009145:-1
position: 1009145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009202:-1
position: 1009202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1007623-1007775:-1:exon

position:1007623:-1
position: 1007623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007775:-1
position: 1007775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1005549-1005700:-1:exon

position:1005549:-1
position: 1005549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005700:-1
position: 1005700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1004541-1004654:-1:exon

position:1004541:-1
position: 1004541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1004654:-1
position: 1004654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1003183-1003490:-1:exon

position:1003490:-1
position: 1003490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TANGO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TANGO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 6 homolog
translation: GARLFAAVAALVEVARLPALGAPLLARHLRLLLSALCGLGHGPAALCQGVSEAERAQCREALRDILDRVYQPLAVQELLILQGQPKQRSAGAGAAPAWLRRLCGHLLSERLLRPGGVQAVARGVLEGTDGGAGAEAAALDWRKCDAVGKILAACPQQCLSLEDYYRQVCPQILDLLHVQDKVAARQFQRVATTTLLTMAREQPQLAEQHLLQPLLAPLRRCSEAAELSLEDLTAGAVLVPEAELGSCVEDVLKVYVVGNDSSSLLLGSLQSVLGVVFSLYSFAKQNVSYLRSPCQDILLWFLEKAEQEQSLAVLEGLARLSSHVPTLHPQCQLRVGSEGGAAVVVGETTSDEDEALYQKISLEQCQVESLVELLSHCQKSGLAGDFFIRCLKELTQVAAEDEAAPNPAVEPGGSLLELEQSQARQGRKLLVLQLVAALCEGVSDTVFTDIVQVQEFLAAVLQRACAHPARGPGAAAEAQGLAMAMGLAAAVLGGAVQLKSSDFAVLKQLVPLLEELSRTYPDPLTQELASDLRIAICTHGACSPGTLGRRPGTAAQSPAGPPGAAPSPPSPRHRHGSPPARRESSEGQSTCRAPSAPGASPAPCADSLAPAGLRELLLSAYDPQPPSRAAALRQLASLVTQRHPEALRLQEKLLQVFLENVQHEDAFVYLSAIQGIALLSSEYPERILPVLLAQYECPAQGTEDAMAAVTRMKLGEVLMRVTRALGDMVFQHREPLIRAFLRGARDPDSALRASSLSNLGELCQHLGFQLGSIIQEVTCCVTAIARTDPEAEVRRAAVHVVVVLLRGLSEKVTEVLQDVLRDLYRLLKRVVTTERDAATVLHAELALEELDAAVRRALFPPQTLQKKIVVLP
SIO_010081: TANGO6
subclass of: SO_0000673
so part of: TANGO6
location: complement(join(1003314..1003490,1004541..1004654,1005549..1005700,1007623..1007775,1009145..1009202,1009375..1009848,1011128..1011182,1011506..1011585,1015133..1015312,1015847..1015973,1017511..1017687,1018972..1019084,1020612..1020694,1021193..1021355,1021860..1021984,1022699..1022825,1023575..1023691,1023891..>1024034))
location: region:1003314-1024034:-1
so has part: feature:1023891-1024034:-1:exon
so has part: feature:1023575-1023691:-1:exon
so has part: feature:1022699-1022825:-1:exon
so has part: feature:1021860-1021984:-1:exon
so has part: feature:1021193-1021355:-1:exon
so has part: feature:1020612-1020694:-1:exon
so has part: feature:1018972-1019084:-1:exon
so has part: feature:1017511-1017687:-1:exon
so has part: feature:1015847-1015973:-1:exon
so has part: feature:1015133-1015312:-1:exon
so has part: feature:1011506-1011585:-1:exon
so has part: feature:1011128-1011182:-1:exon
so has part: feature:1009375-1009848:-1:exon
so has part: feature:1009145-1009202:-1:exon
so has part: feature:1007623-1007775:-1:exon
so has part: feature:1005549-1005700:-1:exon
so has part: feature:1004541-1004654:-1:exon
so has part: feature:1003314-1003490:-1:exon

XP_005052341.1
type: Protein
SIO_000068: ncbiprotein

position:1003314:-1
position: 1003314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023891-1024034:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023575-1023691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1022699-1022825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1021860-1021984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1021193-1021355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1020612-1020694:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1018972-1019084:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1017511-1017687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1015847-1015973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1015133-1015312:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1011506-1011585:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1011128-1011182:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1009375-1009848:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1009145-1009202:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1007623-1007775:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1005549-1005700:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1004541-1004654:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1003314-1003490:-1:exon

LOC101805985
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101805985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1025437..1035020)
location: region:1025437-1035020:-1
so has part: feature:1025437-1035020:-1:exon
subclass of: SO_0000010

101805985
type: Gene
SIO_000068: ncbigene

position:1025437:-1
position: 1025437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1035020:-1
position: 1035020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025437-1035020:-1:exon

LOC101805985
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101805985
product: cadherin-1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052231.2
SIO_010081: LOC101805985
subclass of: SO_0000673
so part of: LOC101805985
location: complement(join(1025437..1026337,1026568..1026711,1026806..1026936,1027023..1027244,1027720..1027947,1028045..1028187,1028288..1028532,1028612..1028692,1028745..1028849,1028954..1029082,1029456..1029628,1030104..1030248,1030321..1030476,1030569..1030700,1030801..1031030,1034687..1034801,1034898..1035020))
location: region:1025437-1035020:-1
so has part: feature:1034898-1035020:-1:exon
so has part: feature:1034687-1034801:-1:exon
so has part: feature:1030801-1031030:-1:exon
so has part: feature:1030569-1030700:-1:exon
so has part: feature:1030321-1030476:-1:exon
so has part: feature:1030104-1030248:-1:exon
so has part: feature:1029456-1029628:-1:exon
so has part: feature:1028954-1029082:-1:exon
so has part: feature:1028745-1028849:-1:exon
so has part: feature:1028612-1028692:-1:exon
so has part: feature:1028288-1028532:-1:exon
so has part: feature:1028045-1028187:-1:exon
so has part: feature:1027720-1027947:-1:exon
so has part: feature:1027023-1027244:-1:exon
so has part: feature:1026806-1026936:-1:exon
so has part: feature:1026568-1026711:-1:exon
so has part: feature:1025437-1026337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034898-1035020:-1:exon

position:1034898:-1
position: 1034898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1034687-1034801:-1:exon

position:1034687:-1
position: 1034687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034801:-1
position: 1034801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030801-1031030:-1:exon

position:1030801:-1
position: 1030801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031030:-1
position: 1031030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1030569-1030700:-1:exon

position:1030569:-1
position: 1030569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030700:-1
position: 1030700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1030321-1030476:-1:exon

position:1030321:-1
position: 1030321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030476:-1
position: 1030476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1030104-1030248:-1:exon

position:1030104:-1
position: 1030104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030248:-1
position: 1030248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1029456-1029628:-1:exon

position:1029456:-1
position: 1029456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029628:-1
position: 1029628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1028954-1029082:-1:exon

position:1028954:-1
position: 1028954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029082:-1
position: 1029082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1028745-1028849:-1:exon

position:1028745:-1
position: 1028745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028849:-1
position: 1028849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1028612-1028692:-1:exon

position:1028612:-1
position: 1028612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028692:-1
position: 1028692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1028288-1028532:-1:exon

position:1028288:-1
position: 1028288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028532:-1
position: 1028532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1028045-1028187:-1:exon

position:1028045:-1
position: 1028045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028187:-1
position: 1028187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1027720-1027947:-1:exon

position:1027720:-1
position: 1027720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027947:-1
position: 1027947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1027023-1027244:-1:exon

position:1027023:-1
position: 1027023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027244:-1
position: 1027244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1026806-1026936:-1:exon

position:1026806:-1
position: 1026806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026936:-1
position: 1026936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1026568-1026711:-1:exon

position:1026568:-1
position: 1026568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1026711:-1
position: 1026711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1025437-1026337:-1:exon

position:1026337:-1
position: 1026337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101805985
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101805985
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-1
translation: MGLRAGCSVPLCLLLLLLQSGQRLCQRAASCQPGFTAETFALTVPRDSVAAGRALGRVNFEDCGESRRAAFLPDDTRFKVSRDGIVSATRPLQLQHRDITFAVHTWDATGKKHSAKVTLRHRRHQHRHHERMQQDTVPDVLIFPEHGHGLRRQKRDWVIPPINCPENERGPFPKKLVQIKSNKDKETKVFYSITGQGADTIPVGVFIIERETGWLEVTKPLDREEKDKYVLYSHAVSANGQPVEDPMEIIITVTDQNDNRPVFTQQVFVGYIEENAKPGTSVMTVNATDADDAINVNNGIIGYSIISEEPKGAQRMFTINAEKGIISVIGTGLDRETTPNYTLIIQAADQEGNGLTNTATAIIKVTDANDNPPVFDPTTYEDAVDENEVGVLVARLHVTDQDLPGSPAWNAVYRIKSGDPQGNFEITTDPKTNDGLLKTAKGLDYETQNRYTLVVSVQNDVPFTVDVNPATATVLVVVRDVNEAPIFIPPVKRVDVMEDVPVGYHVTSYTAQDPDKEQSQKITYRMGSDPAGWLAIDPENGIVTAAQPLDRESAHAINSTYKAIVLAVDNGSPHDATGTGTLLLVLQDVNDNGPVPEPRSFDICNRQPEEQTLTIIDKDLPPNTYPFKAELMHGSSSNWTVKLVTPDLVKVNMKKELEPGEYSIFLKLLDGQGKEQITPVRAQVCSCEGPAKNCERRAYISGGMGVPAILGILGGILALLILLLLLLLFVKRRKVVKEPLLPPEDDMRDNVYHYDEEGGGEEDQDYDLSQLHRGLDARPEVIRNDVAPPLMAAPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGRFRKLAELYGGGEEDD
SIO_010081: LOC101805985
subclass of: SO_0000673
so part of: LOC101805985
location: complement(join(1026125..1026337,1026568..1026711,1026806..1026936,1027023..1027244,1027720..1027947,1028045..1028187,1028288..1028532,1028612..1028692,1028745..1028849,1028954..1029082,1029456..1029628,1030104..1030248,1030321..1030476,1030569..1030700,1030801..1031030,1034687..1034801,1034898..1034954))
location: region:1026125-1034954:-1
so has part: feature:1034898-1034954:-1:exon
so has part: feature:1034687-1034801:-1:exon
so has part: feature:1030801-1031030:-1:exon
so has part: feature:1030569-1030700:-1:exon
so has part: feature:1030321-1030476:-1:exon
so has part: feature:1030104-1030248:-1:exon
so has part: feature:1029456-1029628:-1:exon
so has part: feature:1028954-1029082:-1:exon
so has part: feature:1028745-1028849:-1:exon
so has part: feature:1028612-1028692:-1:exon
so has part: feature:1028288-1028532:-1:exon
so has part: feature:1028045-1028187:-1:exon
so has part: feature:1027720-1027947:-1:exon
so has part: feature:1027023-1027244:-1:exon
so has part: feature:1026806-1026936:-1:exon
so has part: feature:1026568-1026711:-1:exon
so has part: feature:1026125-1026337:-1:exon

XP_005052288.2
type: Protein
SIO_000068: ncbiprotein

position:1026125:-1
position: 1026125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034954:-1
position: 1034954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034898-1034954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1034687-1034801:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030801-1031030:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030569-1030700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1030321-1030476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030104-1030248:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1029456-1029628:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1028954-1029082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028745-1028849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1028612-1028692:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1028288-1028532:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1028045-1028187:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1027720-1027947:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1027023-1027244:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1026806-1026936:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1026568-1026711:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1026125-1026337:-1:exon

CDH3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1035888..1041751)
location: region:1035888-1041751:-1
so has part: feature:1035888-1041751:-1:exon
subclass of: SO_0000010

101805798
type: Gene
SIO_000068: ncbigene

position:1035888:-1
position: 1035888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041751:-1
position: 1041751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1035888-1041751:-1:exon

CDH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CDH3
product: cadherin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052230.1
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1035888..1036292,1036368..1036511,1036589..1036719,1036803..1037021,1037126..1037350,1037679..1037821,1037937..1038181,1038268..1038453,1038532..1038660,1038741..1038916,1039029..1039173,1039249..1039404,1039522..1039632,1039711..1039889,1041592..1041751))
location: region:1035888-1041751:-1
so has part: feature:1041592-1041751:-1:exon
so has part: feature:1039711-1039889:-1:exon
so has part: feature:1039522-1039632:-1:exon
so has part: feature:1039249-1039404:-1:exon
so has part: feature:1039029-1039173:-1:exon
so has part: feature:1038741-1038916:-1:exon
so has part: feature:1038532-1038660:-1:exon
so has part: feature:1038268-1038453:-1:exon
so has part: feature:1037937-1038181:-1:exon
so has part: feature:1037679-1037821:-1:exon
so has part: feature:1037126-1037350:-1:exon
so has part: feature:1036803-1037021:-1:exon
so has part: feature:1036589-1036719:-1:exon
so has part: feature:1036368-1036511:-1:exon
so has part: feature:1035888-1036292:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1041592-1041751:-1:exon

position:1041592:-1
position: 1041592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1039711-1039889:-1:exon

position:1039711:-1
position: 1039711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039889:-1
position: 1039889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1039522-1039632:-1:exon

position:1039522:-1
position: 1039522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039632:-1
position: 1039632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1039249-1039404:-1:exon

position:1039249:-1
position: 1039249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039404:-1
position: 1039404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1039029-1039173:-1:exon

position:1039029:-1
position: 1039029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1039173:-1
position: 1039173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1038741-1038916:-1:exon

position:1038741:-1
position: 1038741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038916:-1
position: 1038916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1038532-1038660:-1:exon

position:1038532:-1
position: 1038532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038660:-1
position: 1038660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1038268-1038453:-1:exon

position:1038268:-1
position: 1038268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038453:-1
position: 1038453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1037937-1038181:-1:exon

position:1037937:-1
position: 1037937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1038181:-1
position: 1038181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1037679-1037821:-1:exon

position:1037679:-1
position: 1037679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037821:-1
position: 1037821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1037126-1037350:-1:exon

position:1037126:-1
position: 1037126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037350:-1
position: 1037350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1036803-1037021:-1:exon

position:1036803:-1
position: 1036803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037021:-1
position: 1037021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1036589-1036719:-1:exon

position:1036589:-1
position: 1036589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036719:-1
position: 1036719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1036368-1036511:-1:exon

position:1036368:-1
position: 1036368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1036511:-1
position: 1036511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1035888-1036292:-1:exon

position:1036292:-1
position: 1036292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CDH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-3
translation: MRGPRSGLCPLSIFILLLLSPLLPAVALSPAPPCVLPGLRRGPLPAPGSSGGCAGPHRTEEPDVGVREDGGPVRLLGVGRALAVPPRDAAGQPDPAPIPAESRRSPQELPRAHAALRRQKRDWVIPPIKVPENERGPFPKKLVQIKSNRDRDTKIFYSITGQGADAPPEGIFTIEKESGWMKVTQPLDREHIDKYHLFSHAVSENGKPVEEPMEIIVTVTDQNDNKPQFTQEVFRGSVPEGALPGTSIMQVTATDADDAVESYNGVIAYSILSQEPREPHPQMFTVNRATGTLSVIASGLDRERVREYTLTVQAADLDGEGLTTTALAVIEIADVNDNAPEFDPKMYEAAVPENVAGREVAWLAVTDLDAPGTPAWRAVYSILRGNDGGAFAISTDPATNEGILRTAKGLDYEAKQQFVLHVAVANEVPFIVKLPMATATVTVTVEDVNEAPVFVPLVQLATVSEDVPPGQTLTACTAKDPDKAQGQRIKFLVGHDPAGWLAVHPENGLVTARDHLDRESPFVKNSTYMAVLLAVDDGSPPATGTGTLLLTLLDVNDNGPEAEPRDITVCQRNPQPQLLTITDRDLPPNTGPFRAELTHGSEDGWAVEVGDTDDTVTLQLVAPLEPDTYSVYLRLLDRPGRAQVTIVTARVCACEGLAQGCPQRPQPVTALPFVLATLGALLALLLILLLLLLFMRRRKVTKEPLLLPEDDTRDNIFYYGEEGGGEEDQNYDLRQLHRGLDARPEVIRNDVAPTLLPAPQYRPRPANPDDIGTFIDENLKAADTDPTAPPYDSLLVFDYEGSGSEATSLSSLNSSASDGDQDYDYLNDWGGRFRKLAELYGGGEEDD
SIO_010081: CDH3
subclass of: SO_0000673
so part of: CDH3
location: complement(join(1036080..1036292,1036368..1036511,1036589..1036719,1036803..1037021,1037126..1037350,1037679..1037821,1037937..1038181,1038268..1038453,1038532..1038660,1038741..1038916,1039029..1039173,1039249..1039404,1039522..1039632,1039711..1039889,1041592..1041733))
location: region:1036080-1041733:-1
so has part: feature:1041592-1041733:-1:exon
so has part: feature:1039711-1039889:-1:exon
so has part: feature:1039522-1039632:-1:exon
so has part: feature:1039249-1039404:-1:exon
so has part: feature:1039029-1039173:-1:exon
so has part: feature:1038741-1038916:-1:exon
so has part: feature:1038532-1038660:-1:exon
so has part: feature:1038268-1038453:-1:exon
so has part: feature:1037937-1038181:-1:exon
so has part: feature:1037679-1037821:-1:exon
so has part: feature:1037126-1037350:-1:exon
so has part: feature:1036803-1037021:-1:exon
so has part: feature:1036589-1036719:-1:exon
so has part: feature:1036368-1036511:-1:exon
so has part: feature:1036080-1036292:-1:exon

XP_005052287.1
type: Protein
SIO_000068: ncbiprotein

position:1036080:-1
position: 1036080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041733:-1
position: 1041733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041592-1041733:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1039711-1039889:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1039522-1039632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039249-1039404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1039029-1039173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1038741-1038916:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1038532-1038660:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1038268-1038453:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1037937-1038181:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1037679-1037821:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1037126-1037350:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1036803-1037021:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1036589-1036719:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1036368-1036511:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1036080-1036292:-1:exon

LOC101806503
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101806503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1043146..1046304
location: region:1043146-1046304:1
so has part: feature:1043146-1046304:1:exon
subclass of: SO_0000010

101806503
type: Gene
SIO_000068: ncbigene

position:1043146:1
position: 1043146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046304:1
position: 1046304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043146-1046304:1:exon

LOC101806503
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101806503
product: 5-hydroxyisourate hydrolase-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016301239.1
SIO_010081: LOC101806503
subclass of: SO_0000673
so part of: LOC101806503
location: join(1043146..1043275,1043368..1043523,1043596..1043740,1043817..1043992,1044061..1044150,1045190..1045332,1045855..1045990,1046127..1046304)
location: region:1043146-1046304:1
so has part: feature:1043146-1043275:1:exon
so has part: feature:1043368-1043523:1:exon
so has part: feature:1043596-1043740:1:exon
so has part: feature:1043817-1043992:1:exon
so has part: feature:1044061-1044150:1:exon
so has part: feature:1045190-1045332:1:exon
so has part: feature:1045855-1045990:1:exon
so has part: feature:1046127-1046304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043146-1043275:1:exon

position:1043275:1
position: 1043275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1043368-1043523:1:exon

position:1043368:1
position: 1043368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043523:1
position: 1043523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1043596-1043740:1:exon

position:1043596:1
position: 1043596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043740:1
position: 1043740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1043817-1043992:1:exon

position:1043817:1
position: 1043817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043992:1
position: 1043992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1044061-1044150:1:exon

position:1044061:1
position: 1044061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044150:1
position: 1044150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1045190-1045332:1:exon

position:1045190:1
position: 1045190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045332:1
position: 1045332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1045855-1045990:1:exon

position:1045855:1
position: 1045855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045990:1
position: 1045990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1046127-1046304:1:exon

position:1046127:1
position: 1046127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101806503
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101806503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxyisourate hydrolase-like isoform X1
translation: MEIIITVTDQNDNRPVFTQAVFHGSVLEGAEPGTSVLRVLATDADDAVNSNNGVVSYSILSQVPEKPQPGMFTIDSSSGLVSVAMLGLVAEEVPEYTLELQAADLEGYGLRAIATARITVQADGMSEVGNGTLTTHVLNTATGLPAAGLAVRLAQLQEPGPQWTELAQRHTDADGRCQPLLAPGQAKSGTYKLHFETAEYWQGLGHTSFYPFVEVVFIITDPAEKLHVPLLISPYSYTTYRGS
SIO_010081: LOC101806503
subclass of: SO_0000673
so part of: LOC101806503
location: join(1043644..1043740,1043817..1043992,1044061..1044150,1045190..1045332,1045855..1045990,1046127..1046216)
location: region:1043644-1046216:1
so has part: feature:1043644-1043740:1:exon
so has part: feature:1043817-1043992:1:exon
so has part: feature:1044061-1044150:1:exon
so has part: feature:1045190-1045332:1:exon
so has part: feature:1045855-1045990:1:exon
so has part: feature:1046127-1046216:1:exon

XP_016156725.1
type: Protein
SIO_000068: ncbiprotein

position:1043644:1
position: 1043644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046216:1
position: 1046216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043644-1043740:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1043817-1043992:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1044061-1044150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1045190-1045332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045855-1045990:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1046127-1046216:1:exon

LOC101806503
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101806503
product: 5-hydroxyisourate hydrolase-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016301240.1
SIO_010081: LOC101806503
subclass of: SO_0000673
so part of: LOC101806503
location: join(1044225..1044601,1045190..1045332,1045855..1045990,1046127..1046304)
location: region:1044225-1046304:1
so has part: feature:1044225-1044601:1:exon
so has part: feature:1045190-1045332:1:exon
so has part: feature:1045855-1045990:1:exon
so has part: feature:1046127-1046304:1:exon

position:1044225:1
position: 1044225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044225-1044601:1:exon

position:1044601:1
position: 1044601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1045190-1045332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045855-1045990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046127-1046304:1:exon

LOC101806503
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101806503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxyisourate hydrolase-like isoform X2
translation: MAFCAGSPATGPSGTQHRQADGMSEVGNGTLTTHVLNTATGLPAAGLAVRLAQLQEPGPQWTELAQRHTDADGRCQPLLAPGQAKSGTYKLHFETAEYWQGLGHTSFYPFVEVVFIITDPAEKLHVPLLISPYSYTTYRGS
SIO_010081: LOC101806503
subclass of: SO_0000673
so part of: LOC101806503
location: join(1044545..1044601,1045190..1045332,1045855..1045990,1046127..1046216)
location: region:1044545-1046216:1
so has part: feature:1044545-1044601:1:exon
so has part: feature:1045190-1045332:1:exon
so has part: feature:1045855-1045990:1:exon
so has part: feature:1046127-1046216:1:exon

XP_016156726.1
type: Protein
SIO_000068: ncbiprotein

position:1044545:1
position: 1044545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1044545-1044601:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045190-1045332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045855-1045990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1046127-1046216:1:exon

GAS8
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1046319..1052754)
location: region:1046319-1052754:-1
so has part: feature:1046319-1052754:-1:exon
subclass of: SO_0000010

101806308
type: Gene
SIO_000068: ncbigene

position:1046319:-1
position: 1046319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052754:-1
position: 1052754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046319-1052754:-1:exon

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GAS8
product: growth arrest specific 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005052233.2
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1046319..1046655,1046891..1046956,1047971..1048180,1049152..1049238,1049538..1049705,1049909..1050114,1050499..1050553,1050873..1051079,1051232..1051429,1052155..1052241,1052681..1052754))
location: region:1046319-1052754:-1
so has part: feature:1052681-1052754:-1:exon
so has part: feature:1052155-1052241:-1:exon
so has part: feature:1051232-1051429:-1:exon
so has part: feature:1050873-1051079:-1:exon
so has part: feature:1050499-1050553:-1:exon
so has part: feature:1049909-1050114:-1:exon
so has part: feature:1049538-1049705:-1:exon
so has part: feature:1049152-1049238:-1:exon
so has part: feature:1047971-1048180:-1:exon
so has part: feature:1046891-1046956:-1:exon
so has part: feature:1046319-1046655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1052681-1052754:-1:exon

position:1052681:-1
position: 1052681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052155-1052241:-1:exon

position:1052155:-1
position: 1052155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052241:-1
position: 1052241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1051232-1051429:-1:exon

position:1051232:-1
position: 1051232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051429:-1
position: 1051429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1050873-1051079:-1:exon

position:1050873:-1
position: 1050873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051079:-1
position: 1051079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1050499-1050553:-1:exon

position:1050499:-1
position: 1050499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050553:-1
position: 1050553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1049909-1050114:-1:exon

position:1049909:-1
position: 1049909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050114:-1
position: 1050114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1049538-1049705:-1:exon

position:1049538:-1
position: 1049538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049705:-1
position: 1049705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1049152-1049238:-1:exon

position:1049152:-1
position: 1049152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1049238:-1
position: 1049238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1047971-1048180:-1:exon

position:1047971:-1
position: 1047971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1048180:-1
position: 1048180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1046891-1046956:-1:exon

position:1046891:-1
position: 1046891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1046956:-1
position: 1046956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1046319-1046655:-1:exon

position:1046655:-1
position: 1046655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GAS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: GAS8
product: growth arrest specific 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016301238.1
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1046319..1046655,1046891..1046956,1047971..1048180,1049152..1049238,1049538..1049705,1049909..1050114,1050499..1050553,1050873..1051079,1051232..1051429,1052155..1052241,1052453..1052467))
location: region:1046319-1052467:-1
so has part: feature:1052453-1052467:-1:exon
so has part: feature:1052155-1052241:-1:exon
so has part: feature:1051232-1051429:-1:exon
so has part: feature:1050873-1051079:-1:exon
so has part: feature:1050499-1050553:-1:exon
so has part: feature:1049909-1050114:-1:exon
so has part: feature:1049538-1049705:-1:exon
so has part: feature:1049152-1049238:-1:exon
so has part: feature:1047971-1048180:-1:exon
so has part: feature:1046891-1046956:-1:exon
so has part: feature:1046319-1046655:-1:exon

position:1052467:-1
position: 1052467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052453-1052467:-1:exon

position:1052453:-1
position: 1052453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052155-1052241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1051232-1051429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050873-1051079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1050499-1050553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1049909-1050114:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1049538-1049705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1049152-1049238:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1047971-1048180:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046891-1046956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1046319-1046655:-1:exon

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 8 isoform X1
translation: MAPKKKGKGKGGKGPAVVDALAPEDMSREQLLEHVARVRQELDRERQERNSFQLECNKIQSYWEITRRELEEKKAELRNRDREMEEAEERHQLEIKVYKQKVKHLLHEQQENLTELKAEGVLSLRRAQKDHWDQERELWKEKRALNVKLKEQELANEAAVTNLCLKHEEEMSRLRSDFELQTKEMEAKYSRKMQALRDEMDLRRKTEIHELEERKNTQISELLGNHEGAFGAIKNYYNDITAKNLTLINLLKEQVEELKKKEAVLEKEKAEVQLQNKELTEPLQEARELVAELQKKLVHYYRDKEALMTSKAHLKITQKELKDLQWEHEVLEQRFSKVQEERDQLYQKFTRAINEVQQKSGFKNLLLERKLQGLVDLLEKKEVELNEVLAASNLDPSALSLVSHKLEDVLQSKNATIQDLQFQLARVCKAHNDMLQTFKAKLTSFGIPLDNLGFQPLSFPIPGQELGQGPAGLVSVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1046506..1046655,1046891..1046956,1047971..1048180,1049152..1049238,1049538..1049705,1049909..1050114,1050499..1050553,1050873..1051079,1051232..1051429,1052155..1052241,1052681..1052683))
location: region:1046506-1052683:-1
so has part: feature:1052681-1052683:-1:exon
so has part: feature:1052155-1052241:-1:exon
so has part: feature:1051232-1051429:-1:exon
so has part: feature:1050873-1051079:-1:exon
so has part: feature:1050499-1050553:-1:exon
so has part: feature:1049909-1050114:-1:exon
so has part: feature:1049538-1049705:-1:exon
so has part: feature:1049152-1049238:-1:exon
so has part: feature:1047971-1048180:-1:exon
so has part: feature:1046891-1046956:-1:exon
so has part: feature:1046506-1046655:-1:exon

XP_005052290.1
type: Protein
SIO_000068: ncbiprotein

position:1046506:-1
position: 1046506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052683:-1
position: 1052683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052681-1052683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052155-1052241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1051232-1051429:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050873-1051079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1050499-1050553:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1049909-1050114:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1049538-1049705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1049152-1049238:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1047971-1048180:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046891-1046956:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1046506-1046655:-1:exon

GAS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: GAS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: growth arrest-specific protein 8 isoform X2
translation: MSREQLLEHVARVRQELDRERQERNSFQLECNKIQSYWEITRRELEEKKAELRNRDREMEEAEERHQLEIKVYKQKVKHLLHEQQENLTELKAEGVLSLRRAQKDHWDQERELWKEKRALNVKLKEQELANEAAVTNLCLKHEEEMSRLRSDFELQTKEMEAKYSRKMQALRDEMDLRRKTEIHELEERKNTQISELLGNHEGAFGAIKNYYNDITAKNLTLINLLKEQVEELKKKEAVLEKEKAEVQLQNKELTEPLQEARELVAELQKKLVHYYRDKEALMTSKAHLKITQKELKDLQWEHEVLEQRFSKVQEERDQLYQKFTRAINEVQQKSGFKNLLLERKLQGLVDLLEKKEVELNEVLAASNLDPSALSLVSHKLEDVLQSKNATIQDLQFQLARVCKAHNDMLQTFKAKLTSFGIPLDNLGFQPLSFPIPGQELGQGPAGLVSVPT
SIO_010081: GAS8
subclass of: SO_0000673
so part of: GAS8
location: complement(join(1046506..1046655,1046891..1046956,1047971..1048180,1049152..1049238,1049538..1049705,1049909..1050114,1050499..1050553,1050873..1051079,1051232..1051429,1052155..1052169))
location: region:1046506-1052169:-1
so has part: feature:1052155-1052169:-1:exon
so has part: feature:1051232-1051429:-1:exon
so has part: feature:1050873-1051079:-1:exon
so has part: feature:1050499-1050553:-1:exon
so has part: feature:1049909-1050114:-1:exon
so has part: feature:1049538-1049705:-1:exon
so has part: feature:1049152-1049238:-1:exon
so has part: feature:1047971-1048180:-1:exon
so has part: feature:1046891-1046956:-1:exon
so has part: feature:1046506-1046655:-1:exon

XP_016156724.1
type: Protein
SIO_000068: ncbiprotein

position:1052169:-1
position: 1052169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052155-1052169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1051232-1051429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1050873-1051079:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1050499-1050553:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1049909-1050114:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1049538-1049705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1049152-1049238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1047971-1048180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1046891-1046956:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1046506-1046655:-1:exon

DEF8
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DEF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1058042..1062893)
location: region:1058042-1062893:-1
so has part: feature:1058042-1062893:-1:exon
subclass of: SO_0000010

101806830
type: Gene
SIO_000068: ncbigene

position:1058042:-1
position: 1058042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062893:-1
position: 1062893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058042-1062893:-1:exon

DEF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DEF8
product: differentially expressed in FDCP 8 homolog (mouse)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005052241.2
SIO_010081: DEF8
subclass of: SO_0000673
so part of: DEF8
location: complement(join(1058042..1058672,1058748..1058857,1058953..1059093,1059173..1059253,1059677..1059790,1060243..1060370,1061063..1061227,1061300..1061441,1061651..1061800,1061882..1061964,1062086..1062893))
location: region:1058042-1062893:-1
so has part: feature:1062086-1062893:-1:exon
so has part: feature:1061882-1061964:-1:exon
so has part: feature:1061651-1061800:-1:exon
so has part: feature:1061300-1061441:-1:exon
so has part: feature:1061063-1061227:-1:exon
so has part: feature:1060243-1060370:-1:exon
so has part: feature:1059677-1059790:-1:exon
so has part: feature:1059173-1059253:-1:exon
so has part: feature:1058953-1059093:-1:exon
so has part: feature:1058748-1058857:-1:exon
so has part: feature:1058042-1058672:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1062086-1062893:-1:exon

position:1062086:-1
position: 1062086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1061882-1061964:-1:exon

position:1061882:-1
position: 1061882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061964:-1
position: 1061964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1061651-1061800:-1:exon

position:1061651:-1
position: 1061651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061800:-1
position: 1061800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1061300-1061441:-1:exon

position:1061300:-1
position: 1061300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061441:-1
position: 1061441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1061063-1061227:-1:exon

position:1061063:-1
position: 1061063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061227:-1
position: 1061227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1060243-1060370:-1:exon

position:1060243:-1
position: 1060243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060370:-1
position: 1060370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1059677-1059790:-1:exon

position:1059677:-1
position: 1059677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059790:-1
position: 1059790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1059173-1059253:-1:exon

position:1059173:-1
position: 1059173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059253:-1
position: 1059253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1058953-1059093:-1:exon

position:1058953:-1
position: 1058953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059093:-1
position: 1059093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1058748-1058857:-1:exon

position:1058748:-1
position: 1058748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058857:-1
position: 1058857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1058042-1058672:-1:exon

position:1058672:-1
position: 1058672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DEF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DEF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: differentially expressed in FDCP 8 homolog
translation: MASDERLARFRQAHLNPFNKTPEQLERPEEESPAPAQQPDPAPGDPEGALDLGLAEDHFSRPVGLILASDVPQLRRAIEECKRVILALPEHSERQKDAVVRLIHLRLKLQELKDPAEDEPNIRVVLEHRFYKEKSKSVKQMCDKCSTIIWGLIQTWYTCTGCYYRCHSKCLPLVSRPCVRAQVSHQAEYQLSICPESGLDSQDYRCAECRAPISLRGVPSEARQCDYTGLYYCSSCHWNDLAVVPARAIHNWDFEPRKVSRCSMRYLALMVSRPVLKLREINPLLFNYVEELVEIRKLRQDILLMKPYFITCKEAMEARLLLQLQDRQHFVENDEMYSLQDLIDIEAGRLGCSLTEIHTLFAKHIKLDCERCQAKGFVCELCREGDVLFPFDSHTSVCADCSAVFHRDCYYDNSTTCPRCARLSLRKQSLFQDSGTEAEP
SIO_010081: DEF8
subclass of: SO_0000673
so part of: DEF8
location: complement(join(1058570..1058672,1058748..1058857,1058953..1059093,1059173..1059253,1059677..1059790,1060243..1060370,1061063..1061227,1061300..1061441,1061651..1061800,1061882..1061964,1062086..1062191))
location: region:1058570-1062191:-1
so has part: feature:1062086-1062191:-1:exon
so has part: feature:1061882-1061964:-1:exon
so has part: feature:1061651-1061800:-1:exon
so has part: feature:1061300-1061441:-1:exon
so has part: feature:1061063-1061227:-1:exon
so has part: feature:1060243-1060370:-1:exon
so has part: feature:1059677-1059790:-1:exon
so has part: feature:1059173-1059253:-1:exon
so has part: feature:1058953-1059093:-1:exon
so has part: feature:1058748-1058857:-1:exon
so has part: feature:1058570-1058672:-1:exon

XP_005052298.1
type: Protein
SIO_000068: ncbiprotein

position:1058570:-1
position: 1058570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062191:-1
position: 1062191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1062086-1062191:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1061882-1061964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061651-1061800:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061300-1061441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061063-1061227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1060243-1060370:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1059677-1059790:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1059173-1059253:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1058953-1059093:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058748-1058857:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058570-1058672:-1:exon

TUBB3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TUBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1064662..1070618)
location: region:1064662-1070618:-1
so has part: feature:1064662-1070618:-1:exon
subclass of: SO_0000010

101815800
type: Gene
SIO_000068: ncbigene

position:1064662:-1
position: 1064662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070618:-1
position: 1070618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1064662-1070618:-1:exon

TUBB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TUBB3
product: tubulin beta 3 class III
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 113 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052286.1
SIO_010081: TUBB3
subclass of: SO_0000673
so part of: TUBB3
location: complement(join(1064662..1065257,1065478..1066039,1066593..1066703,1067395..1067520,1069679..1070618))
location: region:1064662-1070618:-1
so has part: feature:1069679-1070618:-1:exon
so has part: feature:1067395-1067520:-1:exon
so has part: feature:1066593-1066703:-1:exon
so has part: feature:1065478-1066039:-1:exon
so has part: feature:1064662-1065257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1069679-1070618:-1:exon

position:1069679:-1
position: 1069679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1067395-1067520:-1:exon

position:1067395:-1
position: 1067395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067520:-1
position: 1067520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066593-1066703:-1:exon

position:1066593:-1
position: 1066593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066703:-1
position: 1066703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1065478-1066039:-1:exon

position:1065478:-1
position: 1065478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066039:-1
position: 1066039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1064662-1065257:-1:exon

position:1065257:-1
position: 1065257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TUBB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-3 chain
translation: MSTLAPLRLLREPSNASEGNQSNATVGASGGWCQGLDIPNELFLALGLVSLVENLLVVAAILKNRNLHSPTYYFICCLAVSDMLVSISNLAEMLFMLLLEHGVLVMRPSIVRHMDSVIDMLICSSVVSSLSFLGVIAVDRYITIFYALRYHSIMTLQRAVVTMASVWLASTVSSTVLITYFRSNTILLCLIGFFLFMLVLMLVLYIHMFALARHHLHSISSQQKPPTAHRGGSLKGAVTLTILLGIFFICWGPFFFHLILIVTCPTNPFCTCFFSYFNLFLILIICNSVIDPLIYAFRSQELRRTLREVVTCSSPRPPQFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQHQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESEAQGAK
SIO_010081: TUBB3
subclass of: SO_0000673
so part of: TUBB3
location: complement(join(1064738..1065257,1065478..1066039,1066593..1066703,1067395..1067520,1069679..1070618))
location: region:1064738-1070618:-1
so has part: feature:1069679-1070618:-1:exon
so has part: feature:1067395-1067520:-1:exon
so has part: feature:1066593-1066703:-1:exon
so has part: feature:1065478-1066039:-1:exon
so has part: feature:1064738-1065257:-1:exon

XP_005052343.1
type: Protein
SIO_000068: ncbiprotein

position:1064738:-1
position: 1064738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069679-1070618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1067395-1067520:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066593-1066703:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065478-1066039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064738-1065257:-1:exon

TCF25
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TCF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1072404..1088837)
location: region:1072404-1088837:-1
so has part: feature:1072404-1088837:-1:exon
subclass of: SO_0000010

101807648
type: Gene
SIO_000068: ncbigene

position:1072404:-1
position: 1072404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088837:-1
position: 1088837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072404-1088837:-1:exon

TCF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TCF25
product: transcription factor 25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005052242.2
SIO_010081: TCF25
subclass of: SO_0000673
so part of: TCF25
location: complement(join(1072404..1072647,1072765..1072837,1073510..1073589,1073766..1073856,1074436..1074594,1075238..1075325,1076481..1076640,1076965..1077070,1077538..1077630,1078440..1078533,1078846..1078945,1081707..1081837,1082322..1082404,1083628..1083693,1084320..1084441,1086132..1086206,1087538..1087723,1088645..1088837))
location: region:1072404-1088837:-1
so has part: feature:1088645-1088837:-1:exon
so has part: feature:1087538-1087723:-1:exon
so has part: feature:1086132-1086206:-1:exon
so has part: feature:1084320-1084441:-1:exon
so has part: feature:1083628-1083693:-1:exon
so has part: feature:1082322-1082404:-1:exon
so has part: feature:1081707-1081837:-1:exon
so has part: feature:1078846-1078945:-1:exon
so has part: feature:1078440-1078533:-1:exon
so has part: feature:1077538-1077630:-1:exon
so has part: feature:1076965-1077070:-1:exon
so has part: feature:1076481-1076640:-1:exon
so has part: feature:1075238-1075325:-1:exon
so has part: feature:1074436-1074594:-1:exon
so has part: feature:1073766-1073856:-1:exon
so has part: feature:1073510-1073589:-1:exon
so has part: feature:1072765-1072837:-1:exon
so has part: feature:1072404-1072647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1088645-1088837:-1:exon

position:1088645:-1
position: 1088645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1087538-1087723:-1:exon

position:1087538:-1
position: 1087538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087723:-1
position: 1087723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1086132-1086206:-1:exon

position:1086132:-1
position: 1086132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1086206:-1
position: 1086206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1084320-1084441:-1:exon

position:1084320:-1
position: 1084320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084441:-1
position: 1084441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1083628-1083693:-1:exon

position:1083628:-1
position: 1083628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1083693:-1
position: 1083693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1082322-1082404:-1:exon

position:1082322:-1
position: 1082322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082404:-1
position: 1082404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1081707-1081837:-1:exon

position:1081707:-1
position: 1081707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1081837:-1
position: 1081837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1078846-1078945:-1:exon

position:1078846:-1
position: 1078846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078945:-1
position: 1078945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1078440-1078533:-1:exon

position:1078440:-1
position: 1078440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078533:-1
position: 1078533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1077538-1077630:-1:exon

position:1077538:-1
position: 1077538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077630:-1
position: 1077630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1076965-1077070:-1:exon

position:1076965:-1
position: 1076965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077070:-1
position: 1077070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1076481-1076640:-1:exon

position:1076481:-1
position: 1076481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076640:-1
position: 1076640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1075238-1075325:-1:exon

position:1075238:-1
position: 1075238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075325:-1
position: 1075325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1074436-1074594:-1:exon

position:1074436:-1
position: 1074436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074594:-1
position: 1074594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1073766-1073856:-1:exon

position:1073766:-1
position: 1073766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073856:-1
position: 1073856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1073510-1073589:-1:exon

position:1073510:-1
position: 1073510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073589:-1
position: 1073589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1072765-1072837:-1:exon

position:1072765:-1
position: 1072765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072837:-1
position: 1072837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1072404-1072647:-1:exon

position:1072647:-1
position: 1072647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TCF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor 25
translation: MSRRALRRLRGEQRGQEGPGLGELGLDPGPERAREGGPPPAPGKGPRGPRRAGVSNRFELIPAEESEDEPAAGEERPDTRLSEQDTAGGHQEGSKDRSKEGAVTEETDGDGQREAQEQPDQTLATSNKPRKKKKKRKTKKNSAGETVEDNDLEDIDSLLERIEDPRLAPQSQGGITPDSRPLLYVEHRNLNPENELKRYFGARAVLGDQRPRQRQRQYVRSMWLTAPKNTWPRYSKTGITMQLLDTRRGVQHFAFEHHREYQQVQFKFLDAVESMDPNNIVLLLQMNPYHVDSLLQLSDVCRMQEDQEMARDLIERALYSLECAFHPVFSLTSGTCRLDYRRPENRAFFLALFKHLMFLEKRGCPRTALEFCKLILSLDPENDPLCVLLLIDFLSLRAREYTFLTRLFQEWESHRNLSQLPNFAFSVPLAYFFLSQQEERPELERSQARERAAQLVQLALIMFPSVLMPLLDHCSVQPDARVASHPFFGLNAQISQSPALNQLTSLYVGRTHALWKDPAVMAWLEPHVHEVLRMVEAQDTLVQEAEHKRKIRYQSAPRNIYRHIILSEMKEATAALPLEVTSQPVMGFDPLPPLDSIVSYTRPERTSHPSNESTLSLFFRSLLPNFNLQGDVRHDGDDEAGAAQDLNQGVNRLMAAMRDMLANIQFQEPPRDDNPEGDGDWD
SIO_010081: TCF25
subclass of: SO_0000673
so part of: TCF25
location: complement(join(1072486..1072647,1072765..1072837,1073510..1073589,1073766..1073856,1074436..1074594,1075238..1075325,1076481..1076640,1076965..1077070,1077538..1077630,1078440..1078533,1078846..1078945,1081707..1081837,1082322..1082404,1083628..1083693,1084320..1084441,1086132..1086206,1087538..1087723,1088645..1088824))
location: region:1072486-1088824:-1
so has part: feature:1088645-1088824:-1:exon
so has part: feature:1087538-1087723:-1:exon
so has part: feature:1086132-1086206:-1:exon
so has part: feature:1084320-1084441:-1:exon
so has part: feature:1083628-1083693:-1:exon
so has part: feature:1082322-1082404:-1:exon
so has part: feature:1081707-1081837:-1:exon
so has part: feature:1078846-1078945:-1:exon
so has part: feature:1078440-1078533:-1:exon
so has part: feature:1077538-1077630:-1:exon
so has part: feature:1076965-1077070:-1:exon
so has part: feature:1076481-1076640:-1:exon
so has part: feature:1075238-1075325:-1:exon
so has part: feature:1074436-1074594:-1:exon
so has part: feature:1073766-1073856:-1:exon
so has part: feature:1073510-1073589:-1:exon
so has part: feature:1072765-1072837:-1:exon
so has part: feature:1072486-1072647:-1:exon

XP_005052299.1
type: Protein
SIO_000068: ncbiprotein

position:1072486:-1
position: 1072486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088824:-1
position: 1088824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1088645-1088824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1087538-1087723:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1086132-1086206:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084320-1084441:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1083628-1083693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1082322-1082404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1081707-1081837:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1078846-1078945:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1078440-1078533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1077538-1077630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1076965-1077070:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1076481-1076640:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1075238-1075325:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1074436-1074594:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1073766-1073856:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1073510-1073589:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1072765-1072837:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1072486-1072647:-1:exon

SPIRE2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1089398..1100605)
location: region:1089398-1100605:-1
so has part: feature:1089398-1100605:-1:exon
subclass of: SO_0000010

101807839
type: Gene
SIO_000068: ncbigene

position:1089398:-1
position: 1089398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100605:-1
position: 1100605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089398-1100605:-1:exon

SPIRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SPIRE2
product: spire type actin nucleation factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005052243.1
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1089398..1090023,1090106..1090221,1090399..1090426,1090565..1090632,1090705..1090839,1091198..1091331,1091444..1091594,1091675..1091844,1091920..1092028,1092139..1092225,1092300..1092464,1092543..1092623,1092883..1093242,1093405..1093442,1100516..1100605))
location: region:1089398-1100605:-1
so has part: feature:1100516-1100605:-1:exon
so has part: feature:1093405-1093442:-1:exon
so has part: feature:1092883-1093242:-1:exon
so has part: feature:1092543-1092623:-1:exon
so has part: feature:1092300-1092464:-1:exon
so has part: feature:1092139-1092225:-1:exon
so has part: feature:1091920-1092028:-1:exon
so has part: feature:1091675-1091844:-1:exon
so has part: feature:1091444-1091594:-1:exon
so has part: feature:1091198-1091331:-1:exon
so has part: feature:1090705-1090839:-1:exon
so has part: feature:1090565-1090632:-1:exon
so has part: feature:1090399-1090426:-1:exon
so has part: feature:1090106-1090221:-1:exon
so has part: feature:1089398-1090023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1100516-1100605:-1:exon

position:1100516:-1
position: 1100516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1093405-1093442:-1:exon

position:1093405:-1
position: 1093405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093442:-1
position: 1093442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1092883-1093242:-1:exon

position:1092883:-1
position: 1092883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093242:-1
position: 1093242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1092543-1092623:-1:exon

position:1092543:-1
position: 1092543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092623:-1
position: 1092623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1092300-1092464:-1:exon

position:1092300:-1
position: 1092300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092464:-1
position: 1092464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1092139-1092225:-1:exon

position:1092139:-1
position: 1092139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092225:-1
position: 1092225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1091920-1092028:-1:exon

position:1091920:-1
position: 1091920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1092028:-1
position: 1092028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1091675-1091844:-1:exon

position:1091675:-1
position: 1091675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091844:-1
position: 1091844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1091444-1091594:-1:exon

position:1091444:-1
position: 1091444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091594:-1
position: 1091594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1091198-1091331:-1:exon

position:1091198:-1
position: 1091198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091331:-1
position: 1091331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1090705-1090839:-1:exon

position:1090705:-1
position: 1090705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090839:-1
position: 1090839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1090565-1090632:-1:exon

position:1090565:-1
position: 1090565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090632:-1
position: 1090632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1090399-1090426:-1:exon

position:1090399:-1
position: 1090399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090426:-1
position: 1090426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1090106-1090221:-1:exon

position:1090106:-1
position: 1090106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1090221:-1
position: 1090221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1089398-1090023:-1:exon

position:1090023:-1
position: 1090023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPIRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SPIRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 2
translation: MQLTLEGKDLPALLTPSAEAQMVQSLGFAVYRALDWGLDENEERELSPRLEQLIDLMTNSDSEDSGCATADEGYGGQDEEEEGGEGPPRSVRTFGQAMRCCAARLADPAGAPAHYQAVCRALFAETVELMAFLAKIRDAKELLQKLKEDEEEEERPAAELGNLRNTDWARLWVQLMRELRHGVKLKKVQEKQFNPLPTEYQLTPFEMLMQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSRPPLKQASERRLRPLPQKQRTLHEKILEEIRQERKLRPVEQKGYSSLPCIPHACAGHLSSSSCLELSRCPASAVPARPRPRVLLKAPTLAEMEEMNLSEDEDSLATEVPLKRDRSFSEQDLAQLQSQLGGDQAVPRDPEPLQPEPRPRSGSVPASCHPLPDGPALPRAALGAVEERPEDGSSAAPASSSKHLWLEFSHPVESLALTVEEMINVRRVLVKAEMEKFLQSKELYSSLRRGKVCCCCRAKFPLFSWPTSCFFCKRSVCSSCSLKMKMPSKKLAHIPVYALGFESLPGSLLPKAPPLRRREPFHSLSGPCWRRVEEEFPHIYAQGSVLRDVCSDCAGFVTDVVSSSRRSVAVLNASAASRRHAKARSLYSDAWLK
SIO_010081: SPIRE2
subclass of: SO_0000673
so part of: SPIRE2
location: complement(join(1089807..1090023,1090106..1090221,1090399..1090426,1090565..1090632,1090705..1090839,1091198..1091331,1091444..1091594,1091675..1091844,1091920..1092028,1092139..1092225,1092300..1092464,1092543..1092623,1092883..1093242,1093405..1093442,1100516..1100540))
location: region:1089807-1100540:-1
so has part: feature:1100516-1100540:-1:exon
so has part: feature:1093405-1093442:-1:exon
so has part: feature:1092883-1093242:-1:exon
so has part: feature:1092543-1092623:-1:exon
so has part: feature:1092300-1092464:-1:exon
so has part: feature:1092139-1092225:-1:exon
so has part: feature:1091920-1092028:-1:exon
so has part: feature:1091675-1091844:-1:exon
so has part: feature:1091444-1091594:-1:exon
so has part: feature:1091198-1091331:-1:exon
so has part: feature:1090705-1090839:-1:exon
so has part: feature:1090565-1090632:-1:exon
so has part: feature:1090399-1090426:-1:exon
so has part: feature:1090106-1090221:-1:exon
so has part: feature:1089807-1090023:-1:exon

XP_005052300.1
type: Protein
SIO_000068: ncbiprotein

position:1089807:-1
position: 1089807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100540:-1
position: 1100540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100516-1100540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1093405-1093442:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092883-1093242:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092543-1092623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1092300-1092464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1092139-1092225:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1091920-1092028:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1091675-1091844:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1091444-1091594:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1091198-1091331:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1090705-1090839:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1090565-1090632:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1090399-1090426:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1090106-1090221:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1089807-1090023:-1:exon

FANCA
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1101257..1132904
location: region:1101257-1132904:1
so has part: feature:1101257-1132904:1:exon
subclass of: SO_0000010

101808034
type: Gene
SIO_000068: ncbigene

position:1101257:1
position: 1101257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132904:1
position: 1132904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101257-1132904:1:exon

FANCA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FANCA
product: Fanconi anemia complementation group A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301050.1
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1101257..1101587,1101693..1101832,1102712..1102784,1102934..1103076,1103379..1103474,1105137..1105210,1106203..1106318,1106932..1107014,1107445..1107478,1109783..1109849,1110532..1110644,1111248..1111324,1111783..1111924,1112437..1112570,1113462..1113572,1113965..1114060,1114152..1114211,1114915..1115003,1115433..1115493,1115586..1115635,1116673..1116749,1118536..1118640,1119154..1119296,1119746..1119816,1120811..1120910,1121727..1121926,1122063..1122159,1122391..1122567,1123561..1123634,1124176..1124304,1124758..1124824,1125048..1125214,1125492..1125597,1126448..1126507,1126843..1126947,1127573..1127685,1128347..1128488,1129519..1129581,1130727..1130832,1131188..1131263,1131590..1131731,1132314..1132403,1132771..1132904)
location: region:1101257-1132904:1
so has part: feature:1101257-1101587:1:exon
so has part: feature:1101693-1101832:1:exon
so has part: feature:1102712-1102784:1:exon
so has part: feature:1102934-1103076:1:exon
so has part: feature:1103379-1103474:1:exon
so has part: feature:1105137-1105210:1:exon
so has part: feature:1106203-1106318:1:exon
so has part: feature:1106932-1107014:1:exon
so has part: feature:1107445-1107478:1:exon
so has part: feature:1109783-1109849:1:exon
so has part: feature:1110532-1110644:1:exon
so has part: feature:1111248-1111324:1:exon
so has part: feature:1111783-1111924:1:exon
so has part: feature:1112437-1112570:1:exon
so has part: feature:1113462-1113572:1:exon
so has part: feature:1113965-1114060:1:exon
so has part: feature:1114152-1114211:1:exon
so has part: feature:1114915-1115003:1:exon
so has part: feature:1115433-1115493:1:exon
so has part: feature:1115586-1115635:1:exon
so has part: feature:1116673-1116749:1:exon
so has part: feature:1118536-1118640:1:exon
so has part: feature:1119154-1119296:1:exon
so has part: feature:1119746-1119816:1:exon
so has part: feature:1120811-1120910:1:exon
so has part: feature:1121727-1121926:1:exon
so has part: feature:1122063-1122159:1:exon
so has part: feature:1122391-1122567:1:exon
so has part: feature:1123561-1123634:1:exon
so has part: feature:1124176-1124304:1:exon
so has part: feature:1124758-1124824:1:exon
so has part: feature:1125048-1125214:1:exon
so has part: feature:1125492-1125597:1:exon
so has part: feature:1126448-1126507:1:exon
so has part: feature:1126843-1126947:1:exon
so has part: feature:1127573-1127685:1:exon
so has part: feature:1128347-1128488:1:exon
so has part: feature:1129519-1129581:1:exon
so has part: feature:1130727-1130832:1:exon
so has part: feature:1131188-1131263:1:exon
so has part: feature:1131590-1131731:1:exon
so has part: feature:1132314-1132403:1:exon
so has part: feature:1132771-1132904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1101257-1101587:1:exon

position:1101587:1
position: 1101587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1101693-1101832:1:exon

position:1101693:1
position: 1101693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101832:1
position: 1101832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1102712-1102784:1:exon

position:1102712:1
position: 1102712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102784:1
position: 1102784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1102934-1103076:1:exon

position:1102934:1
position: 1102934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103076:1
position: 1103076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1103379-1103474:1:exon

position:1103379:1
position: 1103379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103474:1
position: 1103474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1105137-1105210:1:exon

position:1105137:1
position: 1105137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105210:1
position: 1105210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1106203-1106318:1:exon

position:1106203:1
position: 1106203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106318:1
position: 1106318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1106932-1107014:1:exon

position:1106932:1
position: 1106932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107014:1
position: 1107014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1107445-1107478:1:exon

position:1107445:1
position: 1107445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107478:1
position: 1107478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1109783-1109849:1:exon

position:1109783:1
position: 1109783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109849:1
position: 1109849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1110532-1110644:1:exon

position:1110532:1
position: 1110532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110644:1
position: 1110644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1111248-1111324:1:exon

position:1111248:1
position: 1111248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111324:1
position: 1111324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1111783-1111924:1:exon

position:1111783:1
position: 1111783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111924:1
position: 1111924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1112437-1112570:1:exon

position:1112437:1
position: 1112437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112570:1
position: 1112570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1113462-1113572:1:exon

position:1113462:1
position: 1113462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113572:1
position: 1113572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1113965-1114060:1:exon

position:1113965:1
position: 1113965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114060:1
position: 1114060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1114152-1114211:1:exon

position:1114152:1
position: 1114152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114211:1
position: 1114211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1114915-1115003:1:exon

position:1114915:1
position: 1114915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115003:1
position: 1115003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1115433-1115493:1:exon

position:1115433:1
position: 1115433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115493:1
position: 1115493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1115586-1115635:1:exon

position:1115586:1
position: 1115586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115635:1
position: 1115635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1116673-1116749:1:exon

position:1116673:1
position: 1116673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116749:1
position: 1116749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1118536-1118640:1:exon

position:1118536:1
position: 1118536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118640:1
position: 1118640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1119154-1119296:1:exon

position:1119154:1
position: 1119154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119296:1
position: 1119296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1119746-1119816:1:exon

position:1119746:1
position: 1119746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119816:1
position: 1119816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1120811-1120910:1:exon

position:1120811:1
position: 1120811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120910:1
position: 1120910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1121727-1121926:1:exon

position:1121727:1
position: 1121727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121926:1
position: 1121926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1122063-1122159:1:exon

position:1122063:1
position: 1122063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122159:1
position: 1122159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1122391-1122567:1:exon

position:1122391:1
position: 1122391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122567:1
position: 1122567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1123561-1123634:1:exon

position:1123561:1
position: 1123561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123634:1
position: 1123634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1124176-1124304:1:exon

position:1124176:1
position: 1124176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124304:1
position: 1124304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1124758-1124824:1:exon

position:1124758:1
position: 1124758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124824:1
position: 1124824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1125048-1125214:1:exon

position:1125048:1
position: 1125048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125214:1
position: 1125214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1125492-1125597:1:exon

position:1125492:1
position: 1125492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125597:1
position: 1125597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1126448-1126507:1:exon

position:1126448:1
position: 1126448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126507:1
position: 1126507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1126843-1126947:1:exon

position:1126843:1
position: 1126843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126947:1
position: 1126947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1127573-1127685:1:exon

position:1127573:1
position: 1127573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127685:1
position: 1127685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1128347-1128488:1:exon

position:1128347:1
position: 1128347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128488:1
position: 1128488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1129519-1129581:1:exon

position:1129519:1
position: 1129519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129581:1
position: 1129581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1130727-1130832:1:exon

position:1130727:1
position: 1130727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130832:1
position: 1130832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1131188-1131263:1:exon

position:1131188:1
position: 1131188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131263:1
position: 1131263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1131590-1131731:1:exon

position:1131590:1
position: 1131590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1131731:1
position: 1131731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1132314-1132403:1:exon

position:1132314:1
position: 1132314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132403:1
position: 1132403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1132771-1132904:1:exon

position:1132771:1
position: 1132771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FANCA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FANCA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia group A protein
translation: MAARAGVAGSGGRDGGRGREELAGPARYVRAEAAPGRPPRWALPAGTAEGTGGVNVPPLPSYIPSLCLHAALSLCPRVPLHTPPTAFLKAPVHSICLLHLALLPSKPLCSPAWSINPNFSAGRARKRKSPFGSEAELREAALRLLDQHQNLAELLLEVGDSAKPGVQDGAEHQGVSPESFIVSVLQEQASKLGVPTATLAAKNAVANVERICQGSASPSRVPLLNSDQRKRLSCLLQTVKDLLANNMFCCSLFCQELWKMKEPPVLEAVWHLHSRDIAGLPELLERSPAGPAAVEWLCSSLCGLCEQAGDIPSGDTELARRLLSDFAIVFLQNGFEQASELGRKVEFQKVAYICRAVLQRMLTWVLDAVGKEKQEDVSMVQAVRFWLNVFNVSLYGSVAHPDSLRQFFRHTLTEVLTYNPVLKVSDAIQMQKEWSFTRTCPLLTALFRKLLVAFSVKESICQLQQVLETHEVNWQHVLSCVSTLVVCQAEAEQLFKDLLSHLLLKAFGNYDMENMITAFLIARQAALEGPAVFMPYSEWFKASFGNAGGQHGSSKKSLVFLFEFLSELVPFEAAPYLKVHIMHPPFVPTKHRSLLLEYITLAKTRLADLKVAIEDMGLYEDLSATDEAVQPQAQALRDVEKALQIFENTRKIPTSVIEASIFRRPYYTSWFLPALLRPRVLPKTPDGHMAFIDSLKRADKIPSNLYSTYLQACHAMKEKVLQDDSRAEPSHSKEPLEQLRAELAELRTLVVDQAQWEDVAAQIAVVSDRLRGVLGDSSGENEAAPLNSPIQVAVPAPRLAPCHQSVVDLLLTSFCQTLLAASSFNPPDRQGPCLSSVVKMMCGHRNLLPALLGRLCQLIYHQGPSLGAAHILGLAAFVVHLSECRALIPGVEANFGVSQAVSGKALSVSEFWSSLLMCRTEESFAFCLRFCTAAAAYLMCKFSSCSHEDFCALIPPGLIKKLQYLVPRLSLEARGLLCEEPKTALSWSSLSCPSLSYSRASLCLWKQAGFQELLKEKAFQLSFREWLLMELEVCPEKDILSASERQDFHYWAIYQRYLPAPSAAGGCDGDLEKACGVIINALLDSSQRLDLGACGHSKMSVSPEILCRLQELVLELRCRPKLLPGCSAAQRHFLFEILQGRLTGSQQGSALGEQLWRQQELLLHRRILVGLPASTLVTTCWKGNKTVLDCNNFFCFVNSELKNVCSRGYALSYDITAHFFRGLLSASQDCEDAAGGVNEALTTCQTKCPVVLLSAALWWPRLEPVLCSQWKRLFGAPLAEELDRLRGWHGSSTRFLSSGAVFPLSDPPWLSAAFLHGAILQQSPRGPGREALKRLGTGTEQLLVALLFFSLLDLISARIAPKEGLDFQTSLEWSLEILQCLEERSTPWPLLFHSAERDPGRCRVLRSAASERHSRLLPLAFYSLTPCFQRELLQRDPSFLSVALQMYIQLLQLFVGGEVLPQSDRDPTGQDPLELISAARQFLLGAIPHCPAQSFGNIQPLLSTCEELDPELGAALLHFSGPAVDMELEEELELF
SIO_010081: FANCA
subclass of: SO_0000673
so part of: FANCA
location: join(1101257..1101587,1101693..1101832,1102712..1102784,1102934..1103076,1103379..1103474,1105137..1105210,1106203..1106318,1106932..1107014,1107445..1107478,1109783..1109849,1110532..1110644,1111248..1111324,1111783..1111924,1112437..1112570,1113462..1113572,1113965..1114060,1114152..1114211,1114915..1115003,1115433..1115493,1115586..1115635,1116673..1116749,1118536..1118640,1119154..1119296,1119746..1119816,1120811..1120910,1121727..1121926,1122063..1122159,1122391..1122567,1123561..1123634,1124176..1124304,1124758..1124824,1125048..1125214,1125492..1125597,1126448..1126507,1126843..1126947,1127573..1127685,1128347..1128488,1129519..1129581,1130727..1130832,1131188..1131263,1131590..1131731,1132314..1132403,1132771..1132878)
location: region:1101257-1132878:1
so has part: feature:1101257-1101587:1:exon
so has part: feature:1101693-1101832:1:exon
so has part: feature:1102712-1102784:1:exon
so has part: feature:1102934-1103076:1:exon
so has part: feature:1103379-1103474:1:exon
so has part: feature:1105137-1105210:1:exon
so has part: feature:1106203-1106318:1:exon
so has part: feature:1106932-1107014:1:exon
so has part: feature:1107445-1107478:1:exon
so has part: feature:1109783-1109849:1:exon
so has part: feature:1110532-1110644:1:exon
so has part: feature:1111248-1111324:1:exon
so has part: feature:1111783-1111924:1:exon
so has part: feature:1112437-1112570:1:exon
so has part: feature:1113462-1113572:1:exon
so has part: feature:1113965-1114060:1:exon
so has part: feature:1114152-1114211:1:exon
so has part: feature:1114915-1115003:1:exon
so has part: feature:1115433-1115493:1:exon
so has part: feature:1115586-1115635:1:exon
so has part: feature:1116673-1116749:1:exon
so has part: feature:1118536-1118640:1:exon
so has part: feature:1119154-1119296:1:exon
so has part: feature:1119746-1119816:1:exon
so has part: feature:1120811-1120910:1:exon
so has part: feature:1121727-1121926:1:exon
so has part: feature:1122063-1122159:1:exon
so has part: feature:1122391-1122567:1:exon
so has part: feature:1123561-1123634:1:exon
so has part: feature:1124176-1124304:1:exon
so has part: feature:1124758-1124824:1:exon
so has part: feature:1125048-1125214:1:exon
so has part: feature:1125492-1125597:1:exon
so has part: feature:1126448-1126507:1:exon
so has part: feature:1126843-1126947:1:exon
so has part: feature:1127573-1127685:1:exon
so has part: feature:1128347-1128488:1:exon
so has part: feature:1129519-1129581:1:exon
so has part: feature:1130727-1130832:1:exon
so has part: feature:1131188-1131263:1:exon
so has part: feature:1131590-1131731:1:exon
so has part: feature:1132314-1132403:1:exon
so has part: feature:1132771-1132878:1:exon

XP_016156536.1
type: Protein
SIO_000068: ncbiprotein

position:1132878:1
position: 1132878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1101257-1101587:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1101693-1101832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102712-1102784:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1102934-1103076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1103379-1103474:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1105137-1105210:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1106203-1106318:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1106932-1107014:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1107445-1107478:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1109783-1109849:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1110532-1110644:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1111248-1111324:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1111783-1111924:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1112437-1112570:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1113462-1113572:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1113965-1114060:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1114152-1114211:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1114915-1115003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1115433-1115493:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1115586-1115635:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1116673-1116749:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1118536-1118640:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1119154-1119296:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1119746-1119816:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1120811-1120910:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1121727-1121926:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1122063-1122159:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1122391-1122567:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1123561-1123634:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1124176-1124304:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1124758-1124824:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1125048-1125214:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1125492-1125597:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1126448-1126507:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1126843-1126947:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1127573-1127685:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1128347-1128488:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1129519-1129581:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1130727-1130832:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1131188-1131263:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1131590-1131731:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1132314-1132403:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1132771-1132878:1:exon

ZNF276
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ZNF276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1132974..1141559)
location: region:1132974-1141559:-1
so has part: feature:1132974-1141559:-1:exon
subclass of: SO_0000010

101816006
type: Gene
SIO_000068: ncbigene

position:1132974:-1
position: 1132974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141559:-1
position: 1141559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1132974-1141559:-1:exon

ZNF276
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ZNF276
product: zinc finger protein 276
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301051.1
SIO_010081: ZNF276
subclass of: SO_0000673
so part of: ZNF276
location: complement(join(1132974..1133698,1134311..1134410,1134649..1134766,1135088..1135163,1135238..1135348,1135617..1135697,1136772..1136850,1137630..1137909,1138067..1138278,1138913..1138965,1139059..1139409,1139811..1140049,1140351..1140817,1141349..1141401,1141465..1141559))
location: region:1132974-1141559:-1
so has part: feature:1141465-1141559:-1:exon
so has part: feature:1141349-1141401:-1:exon
so has part: feature:1140351-1140817:-1:exon
so has part: feature:1139811-1140049:-1:exon
so has part: feature:1139059-1139409:-1:exon
so has part: feature:1138913-1138965:-1:exon
so has part: feature:1138067-1138278:-1:exon
so has part: feature:1137630-1137909:-1:exon
so has part: feature:1136772-1136850:-1:exon
so has part: feature:1135617-1135697:-1:exon
so has part: feature:1135238-1135348:-1:exon
so has part: feature:1135088-1135163:-1:exon
so has part: feature:1134649-1134766:-1:exon
so has part: feature:1134311-1134410:-1:exon
so has part: feature:1132974-1133698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1141465-1141559:-1:exon

position:1141465:-1
position: 1141465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1141349-1141401:-1:exon

position:1141349:-1
position: 1141349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141401:-1
position: 1141401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1140351-1140817:-1:exon

position:1140351:-1
position: 1140351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140817:-1
position: 1140817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1139811-1140049:-1:exon

position:1139811:-1
position: 1139811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140049:-1
position: 1140049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1139059-1139409:-1:exon

position:1139059:-1
position: 1139059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139409:-1
position: 1139409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1138913-1138965:-1:exon

position:1138913:-1
position: 1138913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138965:-1
position: 1138965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1138067-1138278:-1:exon

position:1138067:-1
position: 1138067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138278:-1
position: 1138278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1137630-1137909:-1:exon

position:1137630:-1
position: 1137630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137909:-1
position: 1137909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1136772-1136850:-1:exon

position:1136772:-1
position: 1136772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136850:-1
position: 1136850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1135617-1135697:-1:exon

position:1135617:-1
position: 1135617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135697:-1
position: 1135697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1135238-1135348:-1:exon

position:1135238:-1
position: 1135238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135348:-1
position: 1135348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1135088-1135163:-1:exon

position:1135088:-1
position: 1135088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135163:-1
position: 1135163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1134649-1134766:-1:exon

position:1134649:-1
position: 1134649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134766:-1
position: 1134766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1134311-1134410:-1:exon

position:1134311:-1
position: 1134311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1134410:-1
position: 1134410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1132974-1133698:-1:exon

position:1133698:-1
position: 1133698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF276
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ZNF276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 276
translation: MLRGRPKDGTGDAGRAQGYRRRPGAFLASREQSSGVQAQPGMEGGASCLVDLITSSPQCLHSLVTWAHAHAGSCASAPGLRSVLSSEYCGVIRAVWGCGDGHDYVMDTDSDCSSALLDGALAVKREWGKGAAQQRLTDNGDNAQAVPAPKAQRAAVRTAPCQQPASKGMAGSEARPGARCRAGGRSGSARLCGFFLPETPNVPLPLGREISGISDGSAGCGGSGAAPGQRGAHKRGVRPPRTLPQEVLPCPGTVTTPVAPEATAFGARPPWIGAGKGLCSGFPSLNQPSPEHRLLPPAPPPPPPPTGYCRLCHGKFSSRSLRNAFGKVPVLGENSEKQRRLDQVFFADFQRLVGVAVRQDPALPQFVCKKCHAQFYKCRSVLRTFIQRVNASPTGHAKAKGKSSGVQAQPGMEGGASCLVDLITSSPQCLHSLVTWAHAHAGSCASAPGLRSVLSSEYCGVIRAVWGCGDGHDYVMDTDSDCSSALLDGALAVKREWGKGAAQQRLTDNGDNAQAVPAPKAQRAAVRTAPCQQPASKGTMAVPLSVENEPPQDRDPSASQLDSAASVQEQALPQPVSPLSTATGQLSGKQVLSATSDERVKDEFSDLSEGDFLSDDESEKRNVQSSDDSFEPYPEKKVSGKKSDSKEAKKAEEPKIRKKPGPKPGWKKKIKCEREELPTIYKCPYQGCTAVYRGADGMKKHIKEHHEEVRERPCPHPGCNKVFMIDRYLQRHVKLIHTEVRNYICDECGQTFKQRKHLSVHQMRHSGAKPLQCEICGFQCRQRASLKYHMTKHKAEAELEFACDQCGKRFEKAHNLNVHMSMVHPLTQAQDKAKPLEPEPILLLTTSGTAEGQAVKPEVTAEPEPT
SIO_010081: ZNF276
subclass of: SO_0000673
so part of: ZNF276
location: complement(join(1133413..1133698,1134311..1134410,1134649..1134766,1135088..1135163,1135238..1135348,1135617..1135697,1136772..1136850,1137630..1137909,1138067..1138278,1138913..1138965,1139059..1139409,1139811..1140049,1140351..1140817,1141349..1141401,1141465..1141559))
location: region:1133413-1141559:-1
so has part: feature:1141465-1141559:-1:exon
so has part: feature:1141349-1141401:-1:exon
so has part: feature:1140351-1140817:-1:exon
so has part: feature:1139811-1140049:-1:exon
so has part: feature:1139059-1139409:-1:exon
so has part: feature:1138913-1138965:-1:exon
so has part: feature:1138067-1138278:-1:exon
so has part: feature:1137630-1137909:-1:exon
so has part: feature:1136772-1136850:-1:exon
so has part: feature:1135617-1135697:-1:exon
so has part: feature:1135238-1135348:-1:exon
so has part: feature:1135088-1135163:-1:exon
so has part: feature:1134649-1134766:-1:exon
so has part: feature:1134311-1134410:-1:exon
so has part: feature:1133413-1133698:-1:exon

XP_016156537.1
type: Protein
SIO_000068: ncbiprotein

position:1133413:-1
position: 1133413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141465-1141559:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141349-1141401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1140351-1140817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1139811-1140049:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1139059-1139409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1138913-1138965:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138067-1138278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1137630-1137909:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1136772-1136850:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1135617-1135697:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1135238-1135348:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1135088-1135163:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1134649-1134766:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1134311-1134410:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1133413-1133698:-1:exon

VPS9D1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: VPS9D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1141596..>1144503
location: region:1141596-1144503:1
so has part: feature:1141596-1144503:1:exon
subclass of: SO_0000010

101816201
type: Gene
SIO_000068: ncbigene

position:1141596:1
position: 1141596
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1144503:1
position: 1144503
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1141596-1144503:1:exon

VPS9D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: VPS9D1
product: VPS9 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005052288.1
SIO_010081: VPS9D1
subclass of: SO_0000673
so part of: VPS9D1
location: join(<1141596..1141824,1141894..1141986,1142085..1142247,1143572..1143683,1143812..1143874,1144052..1144104,1144184..1144271,1144459..>1144503)
location: region:1141596-1144503:1
so has part: feature:1141596-1141824:1:exon
so has part: feature:1141894-1141986:1:exon
so has part: feature:1142085-1142247:1:exon
so has part: feature:1143572-1143683:1:exon
so has part: feature:1143812-1143874:1:exon
so has part: feature:1144052-1144104:1:exon
so has part: feature:1144184-1144271:1:exon
so has part: feature:1144459-1144503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1141596-1141824:1:exon

position:1141824:1
position: 1141824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1141894-1141986:1:exon

position:1141894:1
position: 1141894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141986:1
position: 1141986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1142085-1142247:1:exon

position:1142085:1
position: 1142085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142247:1
position: 1142247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1143572-1143683:1:exon

position:1143572:1
position: 1143572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143683:1
position: 1143683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1143812-1143874:1:exon

position:1143812:1
position: 1143812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143874:1
position: 1143874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1144052-1144104:1:exon

position:1144052:1
position: 1144052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144104:1
position: 1144104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1144184-1144271:1:exon

position:1144184:1
position: 1144184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144271:1
position: 1144271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1144459-1144503:1:exon

position:1144459:1
position: 1144459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VPS9D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: VPS9D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: VPS9 domain-containing protein 1
translation: SRGCIPGLSRYPWAAPASPGSPCLPFGPGGAIGGVPELPPAAGVPAQPPLWQDAYVEYLKSITLIAQALQEEAAGTENSEGVTPDTPKLLKLAEQCLERVKSIAAALGKAQVKPAAQERGGGAAPLPRHRRVCSDEGGKLSPFLPPEIFQKLQIAEAQSARKELTPLEEASLQNQKLKAAYEARVARLNPSQAVQKTSLTLSLQRQMMENLVIAKAREETLQRKMEERRLRLQEAANRRFSSSVALTPEEQEQRALYAAILEYEQDHDWPRQWKTQLKRSPA
SIO_010081: VPS9D1
subclass of: SO_0000673
so part of: VPS9D1
location: join(<1141596..1141824,1141894..1141986,1142085..1142247,1143572..1143683,1143812..1143874,1144052..1144104,1144184..1144271,1144459..>1144503)
location: region:1141596-1144503:1
so has part: feature:1141596-1141824:1:exon
so has part: feature:1141894-1141986:1:exon
so has part: feature:1142085-1142247:1:exon
so has part: feature:1143572-1143683:1:exon
so has part: feature:1143812-1143874:1:exon
so has part: feature:1144052-1144104:1:exon
so has part: feature:1144184-1144271:1:exon
so has part: feature:1144459-1144503:1:exon

XP_005052345.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1141596-1141824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1141894-1141986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1142085-1142247:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143572-1143683:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1143812-1143874:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1144052-1144104:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1144184-1144271:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1144459-1144503:1:exon

LOC101808222
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101808222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1145827..1146441
location: region:1145827-1146441:1
so has part: feature:1145827-1146441:1:exon
subclass of: SO_0000010

101808222
type: Gene
SIO_000068: ncbigene

position:1145827:1
position: 1145827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146441:1
position: 1146441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145827-1146441:1:exon

LOC101808222
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59894
gene: LOC101808222
product: VPS9 domain-containing protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_001611699.1
SIO_010081: LOC101808222
so part of: LOC101808222
location: join(1145827..1145913,1146034..1146138,1146331..1146441)
location: region:1145827-1146441:1
so has part: feature:1145827-1145913:1:exon
so has part: feature:1146034-1146138:1:exon
so has part: feature:1146331-1146441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145827-1145913:1:exon

position:1145913:1
position: 1145913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1146034-1146138:1:exon

position:1146034:1
position: 1146034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146138:1
position: 1146138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146331-1146441:1:exon

position:1146331:1
position: 1146331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101808222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101808222
product: VPS9 domain-containing protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_005052245.1
SIO_010081: LOC101808222
subclass of: SO_0000673
so part of: LOC101808222
location: join(1145941..1146138,1146331..1146441)
location: region:1145941-1146441:1
so has part: feature:1145941-1146138:1:exon
so has part: feature:1146331-1146441:1:exon

position:1145941:1
position: 1145941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145941-1146138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146331-1146441:1:exon

LOC101808222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101808222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: VPS9 domain-containing protein 1-like
translation: MGVSVGLGQYWGTVPVATTPDGPCCHSGADDLLPILSYVVLQTGLPQLLSECAALEEFIHEGYLIGEEGYCLTSLQSALSYVESLQ
SIO_010081: LOC101808222
subclass of: SO_0000673
so part of: LOC101808222
location: join(1145954..1146138,1146331..1146406)
location: region:1145954-1146406:1
so has part: feature:1145954-1146138:1:exon
so has part: feature:1146331-1146406:1:exon

XP_005052302.1
type: Protein
SIO_000068: ncbiprotein

position:1145954:1
position: 1145954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146406:1
position: 1146406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145954-1146138:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146331-1146406:1:exon

SPATA2L
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SPATA2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1147093..1148512
location: region:1147093-1148512:1
so has part: feature:1147093-1148512:1:exon
subclass of: SO_0000010

101816386
type: Gene
SIO_000068: ncbigene

position:1147093:1
position: 1147093
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1148512:1
position: 1148512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147093-1148512:1:exon

SPATA2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SPATA2L
product: spermatogenesis associated 2 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005052289.2
SIO_010081: SPATA2L
subclass of: SO_0000673
so part of: SPATA2L
location: join(<1147093..1147290,1147368..1147610,1147660..1148127,1148272..1148512)
location: region:1147093-1148512:1
so has part: feature:1147093-1147290:1:exon
so has part: feature:1147368-1147610:1:exon
so has part: feature:1147660-1148127:1:exon
so has part: feature:1148272-1148512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1147093-1147290:1:exon

position:1147290:1
position: 1147290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1147368-1147610:1:exon

position:1147368:1
position: 1147368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147610:1
position: 1147610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1147660-1148127:1:exon

position:1147660:1
position: 1147660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148127:1
position: 1148127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1148272-1148512:1:exon

position:1148272:1
position: 1148272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPATA2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SPATA2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 2-like protein
translation: GQRLQQEPALLEALQEDALALLARGLRDRPDPGRALRGLAGAFQLLELAAVNLYLFPWRREFGTIQTFSGAYVHLLRPALPEADLLRSLGRLGYERQDRHRLAVARPPPGPALIAAAIGFLACRLECEILAEVAPQLRWPRAEELLEARHRAGGCLEMLQDLGTQRRADCGDGVDLYQETPDSPEDTGDKDTAPPALWRDPQDVPTRGWGRCDATLGPQPVGSADPDTSSHLFPEQELVGTSSLQVRGEPRDSPQDTPELPCYQLHWCLHRGMLPSYCCSTCRQLHAGGCAVGRACRSRHRGQELRGERQQRLWLQRTELDMLLAEGSAPRS
SIO_010081: SPATA2L
subclass of: SO_0000673
so part of: SPATA2L
location: join(<1147093..1147290,1147368..1147610,1147660..1148127,1148272..1148361)
location: region:1147093-1148361:1
so has part: feature:1147093-1147290:1:exon
so has part: feature:1147368-1147610:1:exon
so has part: feature:1147660-1148127:1:exon
so has part: feature:1148272-1148361:1:exon

XP_005052346.1
type: Protein
SIO_000068: ncbiprotein

position:1148361:1
position: 1148361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1147093-1147290:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1147368-1147610:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1147660-1148127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1148272-1148361:1:exon

CDK10
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CDK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1148763..1151734)
location: region:1148763-1151734:-1
so has part: feature:1148763-1151734:-1:exon
subclass of: SO_0000010

101808423
type: Gene
SIO_000068: ncbigene

position:1148763:-1
position: 1148763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151734:-1
position: 1151734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1148763-1151734:-1:exon

CDK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CDK10
product: cyclin-dependent kinase 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005052247.2
SIO_010081: CDK10
subclass of: SO_0000673
so part of: CDK10
location: complement(join(1148763..1149107,1149184..1149236,1149336..1149475,1149558..1149681,1149769..1149828,1149908..1149977,1150072..1150124,1150324..1150391,1150748..1150829,1150946..1151048,1151133..1151204,1151716..1151734))
location: region:1148763-1151734:-1
so has part: feature:1151716-1151734:-1:exon
so has part: feature:1151133-1151204:-1:exon
so has part: feature:1150946-1151048:-1:exon
so has part: feature:1150748-1150829:-1:exon
so has part: feature:1150324-1150391:-1:exon
so has part: feature:1150072-1150124:-1:exon
so has part: feature:1149908-1149977:-1:exon
so has part: feature:1149769-1149828:-1:exon
so has part: feature:1149558-1149681:-1:exon
so has part: feature:1149336-1149475:-1:exon
so has part: feature:1149184-1149236:-1:exon
so has part: feature:1148763-1149107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1151716-1151734:-1:exon

position:1151716:-1
position: 1151716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1151133-1151204:-1:exon

position:1151133:-1
position: 1151133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151204:-1
position: 1151204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1150946-1151048:-1:exon

position:1150946:-1
position: 1150946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151048:-1
position: 1151048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1150748-1150829:-1:exon

position:1150748:-1
position: 1150748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150829:-1
position: 1150829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1150324-1150391:-1:exon

position:1150324:-1
position: 1150324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150391:-1
position: 1150391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1150072-1150124:-1:exon

position:1150072:-1
position: 1150072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1150124:-1
position: 1150124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1149908-1149977:-1:exon

position:1149908:-1
position: 1149908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149977:-1
position: 1149977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1149769-1149828:-1:exon

position:1149769:-1
position: 1149769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149828:-1
position: 1149828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1149558-1149681:-1:exon

position:1149558:-1
position: 1149558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149681:-1
position: 1149681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1149336-1149475:-1:exon

position:1149336:-1
position: 1149336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149475:-1
position: 1149475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1149184-1149236:-1:exon

position:1149184:-1
position: 1149184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149236:-1
position: 1149236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1148763-1149107:-1:exon

position:1149107:-1
position: 1149107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDK10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CDK10
product: cyclin-dependent kinase 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_016301115.1
SIO_010081: CDK10
subclass of: SO_0000673
so part of: CDK10
location: complement(join(1148763..1149107,1149184..1149236,1149336..1149475,1149558..1149681,1149769..1149828,1149908..1149977,1150072..1150124,1150324..1150391,1150748..1150829,1150946..1151048,1151133..1151204,1151553..1151625,1151716..1151734))
location: region:1148763-1151734:-1
so has part: feature:1151716-1151734:-1:exon
so has part: feature:1151553-1151625:-1:exon
so has part: feature:1151133-1151204:-1:exon
so has part: feature:1150946-1151048:-1:exon
so has part: feature:1150748-1150829:-1:exon
so has part: feature:1150324-1150391:-1:exon
so has part: feature:1150072-1150124:-1:exon
so has part: feature:1149908-1149977:-1:exon
so has part: feature:1149769-1149828:-1:exon
so has part: feature:1149558-1149681:-1:exon
so has part: feature:1149336-1149475:-1:exon
so has part: feature:1149184-1149236:-1:exon
so has part: feature:1148763-1149107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1151716-1151734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151553-1151625:-1:exon

position:1151553:-1
position: 1151553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151625:-1
position: 1151625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1151133-1151204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1150946-1151048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150748-1150829:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1150324-1150391:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1150072-1150124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1149908-1149977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149769-1149828:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149558-1149681:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1149336-1149475:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1149184-1149236:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1148763-1149107:-1:exon

CDK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CDK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 10
translation: MDNEKDGMPISSLREITLLLELKHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMQTPFSEAQVKCIILQVLKGLQYLHENYIIHRDLKVSNLLMTDKGCVKIADFGLARTYGMPPKPMTPKVVTLWYRAPELLLGMTTQTTSIDMWAAGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPNENIWPGFSKLPLATQYTLRKQPYNNLKHRFPWLSEAGLRLLNFLFMYDPKKRATAKDCLESSYFKEKPLPCEPELMPTFPHHRNKRAASTAVESQAKRSKP
SIO_010081: CDK10
subclass of: SO_0000673
so part of: CDK10
location: complement(join(1149010..1149107,1149184..1149236,1149336..1149475,1149558..1149681,1149769..1149828,1149908..1149977,1150072..1150124,1150324..1150391,1150748..1150829,1150946..1151048,1151133..1151151))
location: region:1149010-1151151:-1
so has part: feature:1151133-1151151:-1:exon
so has part: feature:1150946-1151048:-1:exon
so has part: feature:1150748-1150829:-1:exon
so has part: feature:1150324-1150391:-1:exon
so has part: feature:1150072-1150124:-1:exon
so has part: feature:1149908-1149977:-1:exon
so has part: feature:1149769-1149828:-1:exon
so has part: feature:1149558-1149681:-1:exon
so has part: feature:1149336-1149475:-1:exon
so has part: feature:1149184-1149236:-1:exon
so has part: feature:1149010-1149107:-1:exon

XP_016156601.1
type: Protein
SIO_000068: ncbiprotein

position:1149010:-1
position: 1149010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151151:-1
position: 1151151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151133-1151151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1150946-1151048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150748-1150829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1150324-1150391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150072-1150124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1149908-1149977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1149769-1149828:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1149558-1149681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149336-1149475:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149184-1149236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1149010-1149107:-1:exon

CDK10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CDK10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-dependent kinase 10
translation: MDNEKDGMPISSLREITLLLELKHPNIVELKEVVVGNHLESIFLVMGYCEQDLASLLENMQTPFSEAQVKCIILQVLKGLQYLHENYIIHRDLKVSNLLMTDKGCVKIADFGLARTYGMPPKPMTPKVVTLWYRAPELLLGMTTQTTSIDMWAAGCILAELLAHKPLLPGTSEIHQIDLIVQLLGTPNENIWPGFSKLPLATQYTLRKQPYNNLKHRFPWLSEAGLRLLNFLFMYDPKKRATAKDCLESSYFKEKPLPCEPELMPTFPHHRNKRAASTAVESQAKRSKP
SIO_010081: CDK10
subclass of: SO_0000673
so part of: CDK10
location: complement(join(1149010..1149107,1149184..1149236,1149336..1149475,1149558..1149681,1149769..1149828,1149908..1149977,1150072..1150124,1150324..1150391,1150748..1150829,1150946..1151048,1151133..1151151))
location: region:1149010-1151151:-1
so has part: feature:1151133-1151151:-1:exon
so has part: feature:1150946-1151048:-1:exon
so has part: feature:1150748-1150829:-1:exon
so has part: feature:1150324-1150391:-1:exon
so has part: feature:1150072-1150124:-1:exon
so has part: feature:1149908-1149977:-1:exon
so has part: feature:1149769-1149828:-1:exon
so has part: feature:1149558-1149681:-1:exon
so has part: feature:1149336-1149475:-1:exon
so has part: feature:1149184-1149236:-1:exon
so has part: feature:1149010-1149107:-1:exon

XP_005052304.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1151133-1151151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1150946-1151048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1150748-1150829:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1150324-1150391:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150072-1150124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1149908-1149977:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1149769-1149828:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1149558-1149681:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1149336-1149475:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1149184-1149236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1149010-1149107:-1:exon

CHMP1A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CHMP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1153226..1155874
location: region:1153226-1155874:1
so has part: feature:1153226-1155874:1:exon
subclass of: SO_0000010

101809139
type: Gene
SIO_000068: ncbigene

position:1153226:1
position: 1153226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155874:1
position: 1155874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153226-1155874:1:exon

CHMP1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHMP1A
product: charged multivesicular body protein 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005052251.2
SIO_010081: CHMP1A
subclass of: SO_0000673
so part of: CHMP1A
location: join(1153226..1153418,1153643..1153789,1153985..1154113,1154190..1154377,1154530..1155874)
location: region:1153226-1155874:1
so has part: feature:1153226-1153418:1:exon
so has part: feature:1153643-1153789:1:exon
so has part: feature:1153985-1154113:1:exon
so has part: feature:1154190-1154377:1:exon
so has part: feature:1154530-1155874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1153226-1153418:1:exon

position:1153418:1
position: 1153418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1153643-1153789:1:exon

position:1153643:1
position: 1153643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153789:1
position: 1153789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1153985-1154113:1:exon

position:1153985:1
position: 1153985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154113:1
position: 1154113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1154190-1154377:1:exon

position:1154190:1
position: 1154190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154377:1
position: 1154377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1154530-1155874:1:exon

position:1154530:1
position: 1154530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHMP1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHMP1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 1a
translation: MGCEVPSGPNHPMTLSLVPPRWIPLLPRSSPQFTAKQLEKLSKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGLNWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSSMDLQKVSAVMDKFEQQVQNLDVHTSVMEDSMSSATTLSTPQEQVDSLIVQIAEENGLEIMDQLSQLPEGASAVGESSVRSQEDQLSRRLAALRN
SIO_010081: CHMP1A
subclass of: SO_0000673
so part of: CHMP1A
location: join(1153245..1153418,1153643..1153789,1153985..1154113,1154190..1154377,1154530..1154551)
location: region:1153245-1154551:1
so has part: feature:1153245-1153418:1:exon
so has part: feature:1153643-1153789:1:exon
so has part: feature:1153985-1154113:1:exon
so has part: feature:1154190-1154377:1:exon
so has part: feature:1154530-1154551:1:exon

XP_005052308.1
type: Protein
SIO_000068: ncbiprotein

position:1153245:1
position: 1153245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154551:1
position: 1154551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153245-1153418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1153643-1153789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1153985-1154113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1154190-1154377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1154530-1154551:1:exon

DPEP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1156705..1162083)
location: region:1156705-1162083:-1
so has part: feature:1156705-1162083:-1:exon
subclass of: SO_0000010

101816589
type: Gene
SIO_000068: ncbigene

position:1156705:-1
position: 1156705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162083:-1
position: 1162083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1156705-1162083:-1:exon

DPEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DPEP1
product: dipeptidase 1 (renal)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016301052.1
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1156705..1156881,1158690..1158881,1159177..1159246,1159340..1159490,1159633..1159765,1160805..1160937,1161887..1162083))
location: region:1156705-1162083:-1
so has part: feature:1161887-1162083:-1:exon
so has part: feature:1160805-1160937:-1:exon
so has part: feature:1159633-1159765:-1:exon
so has part: feature:1159340-1159490:-1:exon
so has part: feature:1159177-1159246:-1:exon
so has part: feature:1158690-1158881:-1:exon
so has part: feature:1156705-1156881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1161887-1162083:-1:exon

position:1161887:-1
position: 1161887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1160805-1160937:-1:exon

position:1160805:-1
position: 1160805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1160937:-1
position: 1160937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1159633-1159765:-1:exon

position:1159633:-1
position: 1159633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159765:-1
position: 1159765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1159340-1159490:-1:exon

position:1159340:-1
position: 1159340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159490:-1
position: 1159490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1159177-1159246:-1:exon

position:1159177:-1
position: 1159177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159246:-1
position: 1159246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1158690-1158881:-1:exon

position:1158690:-1
position: 1158690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158881:-1
position: 1158881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1156705-1156881:-1:exon

position:1156881:-1
position: 1156881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DPEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DPEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dipeptidase 1
translation: MCSHGGGRFPLVPSSTQQEKMPGGSVWVLALALALPSTGQYLERAENIMNSTPVIDGHNDLPWQLLRKFNNQLGLPEANLTVLNDTHTNIPKLRQGRVGGQFWSVYVPCETQNKDAVRRTLEQMDVVQRMCDLYPDTFACVTDTEGIRQAFTSGKVASLMGVEGGHSIDSSLGVLRSLYRLGARYMTLTHSCNTPWADNWLVDTKDEKPVHHGLSAFGKMVVQEMNRLGMIVDLAHVSVDTMKAVLNISKAPIIFSHSSAYGICPHRRNVPDDVLRLVVSVGTRRQRVWMWDPRARARRSWLDMLGHPGMLVATPACHRPPPRVTGGAEQQGPGGARTGKL
SIO_010081: DPEP1
subclass of: SO_0000673
so part of: DPEP1
location: complement(join(1156705..1156881,1158690..1158881,1159177..1159246,1159340..1159490,1159633..1159765,1160805..1160937,1161887..1162056))
location: region:1156705-1162056:-1
so has part: feature:1161887-1162056:-1:exon
so has part: feature:1160805-1160937:-1:exon
so has part: feature:1159633-1159765:-1:exon
so has part: feature:1159340-1159490:-1:exon
so has part: feature:1159177-1159246:-1:exon
so has part: feature:1158690-1158881:-1:exon
so has part: feature:1156705-1156881:-1:exon

XP_016156538.1
type: Protein
SIO_000068: ncbiprotein

position:1162056:-1
position: 1162056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1161887-1162056:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1160805-1160937:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159633-1159765:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159340-1159490:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1159177-1159246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1158690-1158881:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1156705-1156881:-1:exon

LOC101809344
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101809344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1163259..1165766
location: region:1163259-1165766:1
so has part: feature:1163259-1165766:1:exon
subclass of: SO_0000010

101809344
type: Gene
SIO_000068: ncbigene

position:1163259:1
position: 1163259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165766:1
position: 1165766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1163259-1165766:1:exon

LOC101809344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101809344
product: sulfotransferase family cytosolic 2B member 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_005052252.2
SIO_010081: LOC101809344
subclass of: SO_0000673
so part of: LOC101809344
location: join(1163259..1163446,1163842..1164050,1164192..1164318,1164390..1164484,1164581..1164761,1165385..1165766)
location: region:1163259-1165766:1
so has part: feature:1163259-1163446:1:exon
so has part: feature:1163842-1164050:1:exon
so has part: feature:1164192-1164318:1:exon
so has part: feature:1164390-1164484:1:exon
so has part: feature:1164581-1164761:1:exon
so has part: feature:1165385-1165766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1163259-1163446:1:exon

position:1163446:1
position: 1163446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1163842-1164050:1:exon

position:1163842:1
position: 1163842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164050:1
position: 1164050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1164192-1164318:1:exon

position:1164192:1
position: 1164192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164318:1
position: 1164318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1164390-1164484:1:exon

position:1164390:1
position: 1164390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164484:1
position: 1164484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1164581-1164761:1:exon

position:1164581:1
position: 1164581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164761:1
position: 1164761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1165385-1165766:1:exon

position:1165385:1
position: 1165385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101809344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101809344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase family cytosolic 2B member 1-like
translation: MERMKVTETFEGIALPGHLHTQESLGFAAAFTFRPTDVLIATYPKSGTTWMQEILTLLYSLGDARPAKTIPNWERAPWLEQIYCREALRDTESPRLLTTHLPAHVLAPALQRSKAKVIYVARNPKDVAVSFYHFHHLAKFLPDPSSFDAFLTQFLEGTVHYGSWFEHVKGWLGQRHLLDILYVTYEEMHQDLRGTAQRLSSFLGCPLAPGTLAALEQHCSFSAMRDNAMANYSLIPAEIMDHSQGRFMRKGVVGDWRSHFSPEQNALFNRRYQEEMGDVELPSQWPMA
SIO_010081: LOC101809344
subclass of: SO_0000673
so part of: LOC101809344
location: join(1163308..1163446,1163842..1164050,1164192..1164318,1164390..1164484,1164581..1164761,1165385..1165500)
location: region:1163308-1165500:1
so has part: feature:1163308-1163446:1:exon
so has part: feature:1163842-1164050:1:exon
so has part: feature:1164192-1164318:1:exon
so has part: feature:1164390-1164484:1:exon
so has part: feature:1164581-1164761:1:exon
so has part: feature:1165385-1165500:1:exon

XP_005052309.1
type: Protein
SIO_000068: ncbiprotein

position:1163308:1
position: 1163308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165500:1
position: 1165500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1163308-1163446:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1163842-1164050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1164192-1164318:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1164390-1164484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1164581-1164761:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1165385-1165500:1:exon

CPNE7
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CPNE7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1165881..1178322)
location: region:1165881-1178322:-1
so has part: feature:1165881-1178322:-1:exon
subclass of: SO_0000010

101816773
type: Gene
SIO_000068: ncbigene

position:1165881:-1
position: 1165881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178322:-1
position: 1178322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1165881-1178322:-1:exon

CPNE7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CPNE7
product: copine 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005052291.2
SIO_010081: CPNE7
subclass of: SO_0000673
so part of: CPNE7
location: complement(join(1165881..1166109,1167636..1167849,1171318..1171503,1173013..1173274,1173375..1173508,1173576..1173627,1173792..1173846,1173970..1174103,1174186..1174245,1174322..1174408,1174749..1174847,1174979..1175068,1175157..1175240,1175308..1175382,1175803..1175877,1175943..1176125,1178112..1178322))
location: region:1165881-1178322:-1
so has part: feature:1178112-1178322:-1:exon
so has part: feature:1175943-1176125:-1:exon
so has part: feature:1175803-1175877:-1:exon
so has part: feature:1175308-1175382:-1:exon
so has part: feature:1175157-1175240:-1:exon
so has part: feature:1174979-1175068:-1:exon
so has part: feature:1174749-1174847:-1:exon
so has part: feature:1174322-1174408:-1:exon
so has part: feature:1174186-1174245:-1:exon
so has part: feature:1173970-1174103:-1:exon
so has part: feature:1173792-1173846:-1:exon
so has part: feature:1173576-1173627:-1:exon
so has part: feature:1173375-1173508:-1:exon
so has part: feature:1173013-1173274:-1:exon
so has part: feature:1171318-1171503:-1:exon
so has part: feature:1167636-1167849:-1:exon
so has part: feature:1165881-1166109:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178112-1178322:-1:exon

position:1178112:-1
position: 1178112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1175943-1176125:-1:exon

position:1175943:-1
position: 1175943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1176125:-1
position: 1176125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175803-1175877:-1:exon

position:1175803:-1
position: 1175803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175877:-1
position: 1175877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175308-1175382:-1:exon

position:1175308:-1
position: 1175308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175382:-1
position: 1175382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1175157-1175240:-1:exon

position:1175157:-1
position: 1175157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175240:-1
position: 1175240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1174979-1175068:-1:exon