Ficedula albicollis isolate OC2 chromosome 10, FicAlb1.5, whole genome shotgun sequence.
type: Entry
definition: Ficedula albicollis isolate OC2 chromosome 10, FicAlb1.5, whole genome shotgun sequence.
sequence version: NC_021682.1
sequence date: 2016-04-20
sequence: sequence
division: CON
label: NC_021682.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA208061
dblink: SAMN02981387
keyword: WGS
keyword: RefSeq
source: Ficedula albicollis (collared flycatcher)
organism: Ficedula albicollis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
reference: 1
references: 23103876
reference: 2
references: 9023104
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM001999.1.\nAssembly name: FicAlb1.5\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by Uppsala University on 2013/06/24.\nThe original whole-genome shotgun project has the accession\nAGTO00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Method :: SOAPdenovo v. 1.05\nAssembly Name :: FicAlb1.5\nGenome Coverage :: 60.0x\nSequencing Technology :: Illumina GAII; Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Ficedula albicollis Annotation\n Release 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 21346708
topology: linear
so has quality: SO_0000987
location: 1..21346708
location: region:1-21346708:1
RO_0002162: 59894

NC_021682
type: RefSeq
SIO_000068: refseq

PRJNA208061
type: BioProject
SIO_000068: bioproject

SAMN02981387
type: BioSample
SIO_000068: biosample

1
title: The genomic landscape of species divergence in Ficedula flycatchers
author: Ellegren, H.
author: Smeds, L.
author: Burri, R.
author: Olason, P.I.
author: Backstrom, N.
author: Kawakami, T.
author: Kunstner, A.
author: Makinen, H.
author: Nadachowska-Brzyska, K.
author: Qvarnstrom, A.
author: Uebbing, S.
author: Wolf, J.B.
journal: Nature
volume: 491
issue: 7426
pages: 756-760
year: 2012
pubmed: 23103876

23103876
type: PubMed
SIO_000068: pubmed

2
title: tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
author: Lowe, T.M.
author: Eddy, S.R.
journal: Nucleic Acids Res.
volume: 25
issue: 5
pages: 955-964
year: 1997
pubmed: 9023104
comments: This is the methods paper for tRNAscan-SE.

9023104
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21346708:1
position: 21346708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-21346708:1:source
so part of: sequence
organism: Ficedula albicollis
mol type: genomic DNA
isolate: OC2
chromosome: 10
sex: male
country: Sweden: Oland
collection date: 2009

59894
type: Taxonomy
SIO_000068: taxonomy

CA12
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CA12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8803..51623)
location: region:8803-51623:-1
so has part: feature:8803-51623:-1:exon
subclass of: SO_0000010

101821013
type: Gene
SIO_000068: ncbigene

position:8803:-1
position: 8803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51623:-1
position: 51623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8803-51623:-1:exon

CA12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CA12
product: carbonic anhydrase 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300755.1
SIO_010081: CA12
subclass of: SO_0000673
so part of: CA12
location: complement(join(8803..10401,11092..11176,14819..14945,15991..16148,16542..16605,18520..18615,19425..19567,22829..23112,29140..29263,51449..51623))
location: region:8803-51623:-1
so has part: feature:51449-51623:-1:exon
so has part: feature:29140-29263:-1:exon
so has part: feature:22829-23112:-1:exon
so has part: feature:19425-19567:-1:exon
so has part: feature:18520-18615:-1:exon
so has part: feature:16542-16605:-1:exon
so has part: feature:15991-16148:-1:exon
so has part: feature:14819-14945:-1:exon
so has part: feature:11092-11176:-1:exon
so has part: feature:8803-10401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51449-51623:-1:exon

position:51449:-1
position: 51449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29140-29263:-1:exon

position:29140:-1
position: 29140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29263:-1
position: 29263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22829-23112:-1:exon

position:22829:-1
position: 22829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23112:-1
position: 23112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19425-19567:-1:exon

position:19425:-1
position: 19425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19567:-1
position: 19567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18520-18615:-1:exon

position:18520:-1
position: 18520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18615:-1
position: 18615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16542-16605:-1:exon

position:16542:-1
position: 16542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16605:-1
position: 16605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15991-16148:-1:exon

position:15991:-1
position: 15991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16148:-1
position: 16148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:14819-14945:-1:exon

position:14819:-1
position: 14819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14945:-1
position: 14945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11092-11176:-1:exon

position:11092:-1
position: 11092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11176:-1
position: 11176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8803-10401:-1:exon

position:10401:-1
position: 10401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CA12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CA12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 12
translation: MYVKNKREIISGRPEEHTDPAAASGSSPLSRGPGPEPSTQLLRQTKGARSATPQSSAEQKKARGEIRFLILKSERLILLPEEPEDLTQDDHTDLASKIPINSFLSRFCVKADTGEFLGKLYCEGLPNVSPLIHTGPDGEKAWPNKYPFCAGVFQSPIDFHEDILQYDSNLVPLEFIGYDVPSTDQFTLINNGHSVKMYLSPAMSIRNLPFEYTASQLHLHWGNRNKSEGSEHTVSGKHFAAELHIVHYNSEKYPDVTAAMDKADGLAVLAVLLEIGPFNPSYEKIFRHFQNVRYKDQKVLVPGFNIQELLPDRLDEYYRYEGSLTTPPCYPSVLWTVFRHPVKISQEQLLALETAMYCTESDDPEPLEMVDNFRNVQEFHERLVFISFHEGFVVSVGIACILGVLIILAVAFWLLKKKSSKKGGEDNRGVIYKPGTQKEEEDISKM
SIO_010081: CA12
subclass of: SO_0000673
so part of: CA12
location: complement(join(10317..10401,11092..11176,14819..14945,15991..16148,16542..16605,18520..18615,19425..19567,22829..23112,29140..29263,51449..51623))
location: region:10317-51623:-1
so has part: feature:51449-51623:-1:exon
so has part: feature:29140-29263:-1:exon
so has part: feature:22829-23112:-1:exon
so has part: feature:19425-19567:-1:exon
so has part: feature:18520-18615:-1:exon
so has part: feature:16542-16605:-1:exon
so has part: feature:15991-16148:-1:exon
so has part: feature:14819-14945:-1:exon
so has part: feature:11092-11176:-1:exon
so has part: feature:10317-10401:-1:exon

XP_016156241.1
type: Protein
SIO_000068: ncbiprotein

position:10317:-1
position: 10317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51449-51623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29140-29263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:22829-23112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19425-19567:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18520-18615:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16542-16605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15991-16148:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14819-14945:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11092-11176:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10317-10401:-1:exon

USP3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: USP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 58542..91919
location: region:58542-91919:1
so has part: feature:58542-91919:1:exon
subclass of: SO_0000010

101809990
type: Gene
SIO_000068: ncbigene

position:58542:1
position: 58542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91919:1
position: 91919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58542-91919:1:exon

USP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: USP3
product: ubiquitin specific peptidase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005051504.2
SIO_010081: USP3
subclass of: SO_0000673
so part of: USP3
location: join(58542..58693,66240..66300,68024..68155,74449..74532,76078..76159,78311..78393,78892..79005,79663..79776,84728..84874,86720..86826,86997..87077,87751..87869,88019..88132,88250..88317,89065..91919)
location: region:58542-91919:1
so has part: feature:58542-58693:1:exon
so has part: feature:66240-66300:1:exon
so has part: feature:68024-68155:1:exon
so has part: feature:74449-74532:1:exon
so has part: feature:76078-76159:1:exon
so has part: feature:78311-78393:1:exon
so has part: feature:78892-79005:1:exon
so has part: feature:79663-79776:1:exon
so has part: feature:84728-84874:1:exon
so has part: feature:86720-86826:1:exon
so has part: feature:86997-87077:1:exon
so has part: feature:87751-87869:1:exon
so has part: feature:88019-88132:1:exon
so has part: feature:88250-88317:1:exon
so has part: feature:89065-91919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:58542-58693:1:exon

position:58693:1
position: 58693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66240-66300:1:exon

position:66240:1
position: 66240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66300:1
position: 66300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:68024-68155:1:exon

position:68024:1
position: 68024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68155:1
position: 68155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74449-74532:1:exon

position:74449:1
position: 74449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74532:1
position: 74532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:76078-76159:1:exon

position:76078:1
position: 76078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76159:1
position: 76159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:78311-78393:1:exon

position:78311:1
position: 78311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78393:1
position: 78393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:78892-79005:1:exon

position:78892:1
position: 78892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79005:1
position: 79005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:79663-79776:1:exon

position:79663:1
position: 79663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79776:1
position: 79776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:84728-84874:1:exon

position:84728:1
position: 84728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84874:1
position: 84874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:86720-86826:1:exon

position:86720:1
position: 86720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86826:1
position: 86826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:86997-87077:1:exon

position:86997:1
position: 86997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87077:1
position: 87077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:87751-87869:1:exon

position:87751:1
position: 87751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87869:1
position: 87869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:88019-88132:1:exon

position:88019:1
position: 88019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88132:1
position: 88132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:88250-88317:1:exon

position:88250:1
position: 88250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88317:1
position: 88317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:89065-91919:1:exon

position:89065:1
position: 89065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

USP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: USP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 3
translation: MCWALQGPARSVKSCALTRALYSHSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPITNHKKTEKQEKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKVREHLQNLENSAFTSDRHRKRKLLENSSLNSKLLKVNGSTTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSNLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQESGPMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLVAVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETVGKAKAYILFYVERPAKPAAEKL
SIO_010081: USP3
subclass of: SO_0000673
so part of: USP3
location: join(58618..58693,66240..66300,68024..68155,74449..74532,76078..76159,78311..78393,78892..79005,79663..79776,84728..84874,86720..86826,86997..87077,87751..87869,88019..88132,88250..88317,89065..89230)
location: region:58618-89230:1
so has part: feature:58618-58693:1:exon
so has part: feature:66240-66300:1:exon
so has part: feature:68024-68155:1:exon
so has part: feature:74449-74532:1:exon
so has part: feature:76078-76159:1:exon
so has part: feature:78311-78393:1:exon
so has part: feature:78892-79005:1:exon
so has part: feature:79663-79776:1:exon
so has part: feature:84728-84874:1:exon
so has part: feature:86720-86826:1:exon
so has part: feature:86997-87077:1:exon
so has part: feature:87751-87869:1:exon
so has part: feature:88019-88132:1:exon
so has part: feature:88250-88317:1:exon
so has part: feature:89065-89230:1:exon

XP_005051561.1
type: Protein
SIO_000068: ncbiprotein

position:58618:1
position: 58618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89230:1
position: 89230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58618-58693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66240-66300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:68024-68155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74449-74532:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:76078-76159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78311-78393:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78892-79005:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:79663-79776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84728-84874:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86720-86826:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:86997-87077:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:87751-87869:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:88019-88132:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:88250-88317:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:89065-89230:1:exon

FBXL22
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FBXL22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 94986..100609
location: region:94986-100609:1
so has part: feature:94986-100609:1:exon
subclass of: SO_0000010

101810190
type: Gene
SIO_000068: ncbigene

position:94986:1
position: 94986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100609:1
position: 100609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94986-100609:1:exon

FBXL22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FBXL22
product: F-box and leucine-rich repeat protein 22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005051505.1
SIO_010081: FBXL22
subclass of: SO_0000673
so part of: FBXL22
location: join(94986..95955,97907..100609)
location: region:94986-100609:1
so has part: feature:94986-95955:1:exon
so has part: feature:97907-100609:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:94986-95955:1:exon

position:95955:1
position: 95955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97907-100609:1:exon

position:97907:1
position: 97907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXL22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FBXL22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box and leucine-rich protein 22
translation: MHITQLNRECLLHLFSFLDKNSRRNLAKTCHKLLEVFQDPLLWSLLKFHSPVELKKDNFLLGPALKHLSICWYSERVKVCNIEDWMKNSLQKDFCKRHENTVSDFLLAVCNRCPNLLSVTLSGCGHVTDDCILQLLKSCPKLRSLKLENCVRISDQSLEAVTLHGASLQTLHVDFCRNVTRAGLDRVRAKCPSVMLRADRSAGMIPDSKPGKKLMLEKASRKLVQL
SIO_010081: FBXL22
subclass of: SO_0000673
so part of: FBXL22
location: join(95621..95955,97907..98252)
location: region:95621-98252:1
so has part: feature:95621-95955:1:exon
so has part: feature:97907-98252:1:exon

XP_005051562.1
type: Protein
SIO_000068: ncbiprotein

position:95621:1
position: 95621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98252:1
position: 98252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95621-95955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97907-98252:1:exon

HERC1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HERC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(101673..177773)
location: region:101673-177773:-1
so has part: feature:101673-177773:-1:exon
subclass of: SO_0000010

101821199
type: Gene
SIO_000068: ncbigene

position:101673:-1
position: 101673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177773:-1
position: 177773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101673-177773:-1:exon

HERC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HERC1
product: HECT and RLD domain containing E3 ubiquitin protein ligase family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051565.2
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
location: complement(join(101673..102641,103519..103824,104728..104880,105102..105354,105753..105829,106123..106288,106444..106613,106966..107370,108484..108585,109809..109978,111233..111335,111891..112013,112522..112677,113384..113565,114028..114166,114574..114699,114821..114886,115526..115819,116096..116269,116394..116495,117098..117244,117796..117910,118404..118603,119520..119650,120456..120656,121192..121319,122579..122706,123752..123957,124740..124953,125333..125603,125836..126010,126630..126830,128041..128093,129301..129569,130794..131014,131262..131383,132104..132335,132497..132613,133736..133896,134820..135018,135715..136490,137883..138403,138930..139013,139209..139448,140075..140251,140333..140443,140696..140802,141046..141201,142083..142276,143282..143519,144075..144195,144285..144500,144806..145077,152017..152068,152347..152467,153527..153833,155783..155954,157255..157375,157468..157582,158817..158990,159836..160057,160571..160762,161262..161394,161571..161723,162891..163112,163903..164028,164575..164740,165480..165614,166689..166860,166955..167099,168095..168222,168779..168922,170446..170542,171140..171451,173053..173247,173525..173620,174790..175745,177621..177773))
location: region:101673-177773:-1
so has part: feature:177621-177773:-1:exon
so has part: feature:174790-175745:-1:exon
so has part: feature:173525-173620:-1:exon
so has part: feature:173053-173247:-1:exon
so has part: feature:171140-171451:-1:exon
so has part: feature:170446-170542:-1:exon
so has part: feature:168779-168922:-1:exon
so has part: feature:168095-168222:-1:exon
so has part: feature:166955-167099:-1:exon
so has part: feature:166689-166860:-1:exon
so has part: feature:165480-165614:-1:exon
so has part: feature:164575-164740:-1:exon
so has part: feature:163903-164028:-1:exon
so has part: feature:162891-163112:-1:exon
so has part: feature:161571-161723:-1:exon
so has part: feature:161262-161394:-1:exon
so has part: feature:160571-160762:-1:exon
so has part: feature:159836-160057:-1:exon
so has part: feature:158817-158990:-1:exon
so has part: feature:157468-157582:-1:exon
so has part: feature:157255-157375:-1:exon
so has part: feature:155783-155954:-1:exon
so has part: feature:153527-153833:-1:exon
so has part: feature:152347-152467:-1:exon
so has part: feature:152017-152068:-1:exon
so has part: feature:144806-145077:-1:exon
so has part: feature:144285-144500:-1:exon
so has part: feature:144075-144195:-1:exon
so has part: feature:143282-143519:-1:exon
so has part: feature:142083-142276:-1:exon
so has part: feature:141046-141201:-1:exon
so has part: feature:140696-140802:-1:exon
so has part: feature:140333-140443:-1:exon
so has part: feature:140075-140251:-1:exon
so has part: feature:139209-139448:-1:exon
so has part: feature:138930-139013:-1:exon
so has part: feature:137883-138403:-1:exon
so has part: feature:135715-136490:-1:exon
so has part: feature:134820-135018:-1:exon
so has part: feature:133736-133896:-1:exon
so has part: feature:132497-132613:-1:exon
so has part: feature:132104-132335:-1:exon
so has part: feature:131262-131383:-1:exon
so has part: feature:130794-131014:-1:exon
so has part: feature:129301-129569:-1:exon
so has part: feature:128041-128093:-1:exon
so has part: feature:126630-126830:-1:exon
so has part: feature:125836-126010:-1:exon
so has part: feature:125333-125603:-1:exon
so has part: feature:124740-124953:-1:exon
so has part: feature:123752-123957:-1:exon
so has part: feature:122579-122706:-1:exon
so has part: feature:121192-121319:-1:exon
so has part: feature:120456-120656:-1:exon
so has part: feature:119520-119650:-1:exon
so has part: feature:118404-118603:-1:exon
so has part: feature:117796-117910:-1:exon
so has part: feature:117098-117244:-1:exon
so has part: feature:116394-116495:-1:exon
so has part: feature:116096-116269:-1:exon
so has part: feature:115526-115819:-1:exon
so has part: feature:114821-114886:-1:exon
so has part: feature:114574-114699:-1:exon
so has part: feature:114028-114166:-1:exon
so has part: feature:113384-113565:-1:exon
so has part: feature:112522-112677:-1:exon
so has part: feature:111891-112013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177621-177773:-1:exon

position:177621:-1
position: 177621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174790-175745:-1:exon

position:174790:-1
position: 174790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175745:-1
position: 175745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:173525-173620:-1:exon

position:173525:-1
position: 173525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173620:-1
position: 173620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:173053-173247:-1:exon

position:173053:-1
position: 173053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173247:-1
position: 173247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:171140-171451:-1:exon

position:171140:-1
position: 171140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171451:-1
position: 171451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170446-170542:-1:exon

position:170446:-1
position: 170446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:170542:-1
position: 170542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:168779-168922:-1:exon

position:168779:-1
position: 168779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168922:-1
position: 168922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:168095-168222:-1:exon

position:168095:-1
position: 168095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:168222:-1
position: 168222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:166955-167099:-1:exon

position:166955:-1
position: 166955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167099:-1
position: 167099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:166689-166860:-1:exon

position:166689:-1
position: 166689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166860:-1
position: 166860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:165480-165614:-1:exon

position:165480:-1
position: 165480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165614:-1
position: 165614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:164575-164740:-1:exon

position:164575:-1
position: 164575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164740:-1
position: 164740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:163903-164028:-1:exon

position:163903:-1
position: 163903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164028:-1
position: 164028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:162891-163112:-1:exon

position:162891:-1
position: 162891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:163112:-1
position: 163112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:161571-161723:-1:exon

position:161571:-1
position: 161571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161723:-1
position: 161723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:161262-161394:-1:exon

position:161262:-1
position: 161262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161394:-1
position: 161394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:160571-160762:-1:exon

position:160571:-1
position: 160571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160762:-1
position: 160762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:159836-160057:-1:exon

position:159836:-1
position: 159836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160057:-1
position: 160057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:158817-158990:-1:exon

position:158817:-1
position: 158817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158990:-1
position: 158990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:157468-157582:-1:exon

position:157468:-1
position: 157468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157582:-1
position: 157582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:157255-157375:-1:exon

position:157255:-1
position: 157255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157375:-1
position: 157375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:155783-155954:-1:exon

position:155783:-1
position: 155783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155954:-1
position: 155954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:153527-153833:-1:exon

position:153527:-1
position: 153527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153833:-1
position: 153833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:152347-152467:-1:exon

position:152347:-1
position: 152347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152467:-1
position: 152467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:152017-152068:-1:exon

position:152017:-1
position: 152017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152068:-1
position: 152068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:144806-145077:-1:exon

position:144806:-1
position: 144806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145077:-1
position: 145077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:144285-144500:-1:exon

position:144285:-1
position: 144285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144500:-1
position: 144500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:144075-144195:-1:exon

position:144075:-1
position: 144075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144195:-1
position: 144195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:143282-143519:-1:exon

position:143282:-1
position: 143282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143519:-1
position: 143519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:142083-142276:-1:exon

position:142083:-1
position: 142083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142276:-1
position: 142276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:141046-141201:-1:exon

position:141046:-1
position: 141046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141201:-1
position: 141201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:140696-140802:-1:exon

position:140696:-1
position: 140696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140802:-1
position: 140802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:140333-140443:-1:exon

position:140333:-1
position: 140333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140443:-1
position: 140443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:140075-140251:-1:exon

position:140075:-1
position: 140075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140251:-1
position: 140251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:139209-139448:-1:exon

position:139209:-1
position: 139209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139448:-1
position: 139448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:138930-139013:-1:exon

position:138930:-1
position: 138930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139013:-1
position: 139013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:137883-138403:-1:exon

position:137883:-1
position: 137883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138403:-1
position: 138403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:135715-136490:-1:exon

position:135715:-1
position: 135715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136490:-1
position: 136490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:134820-135018:-1:exon

position:134820:-1
position: 134820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135018:-1
position: 135018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:133736-133896:-1:exon

position:133736:-1
position: 133736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133896:-1
position: 133896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:132497-132613:-1:exon

position:132497:-1
position: 132497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132613:-1
position: 132613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:132104-132335:-1:exon

position:132104:-1
position: 132104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132335:-1
position: 132335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:131262-131383:-1:exon

position:131262:-1
position: 131262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131383:-1
position: 131383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:130794-131014:-1:exon

position:130794:-1
position: 130794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131014:-1
position: 131014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:129301-129569:-1:exon

position:129301:-1
position: 129301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129569:-1
position: 129569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:128041-128093:-1:exon

position:128041:-1
position: 128041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128093:-1
position: 128093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:126630-126830:-1:exon

position:126630:-1
position: 126630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126830:-1
position: 126830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:125836-126010:-1:exon

position:125836:-1
position: 125836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126010:-1
position: 126010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:125333-125603:-1:exon

position:125333:-1
position: 125333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125603:-1
position: 125603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:124740-124953:-1:exon

position:124740:-1
position: 124740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124953:-1
position: 124953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:123752-123957:-1:exon

position:123752:-1
position: 123752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123957:-1
position: 123957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:122579-122706:-1:exon

position:122579:-1
position: 122579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122706:-1
position: 122706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:121192-121319:-1:exon

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position: 121192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121319:-1
position: 121319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:120456-120656:-1:exon

position:120456:-1
position: 120456
reference: sequence
type: ReverseStrandPosition
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position:120656:-1
position: 120656
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 55
SIO_000628: feature:119520-119650:-1:exon

position:119520:-1
position: 119520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119650:-1
position: 119650
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 56
SIO_000628: feature:118404-118603:-1:exon

position:118404:-1
position: 118404
reference: sequence
type: ReverseStrandPosition
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position:118603:-1
position: 118603
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 57
SIO_000628: feature:117796-117910:-1:exon

position:117796:-1
position: 117796
reference: sequence
type: ReverseStrandPosition
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position:117910:-1
position: 117910
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 58
SIO_000628: feature:117098-117244:-1:exon

position:117098:-1
position: 117098
reference: sequence
type: ReverseStrandPosition
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position:117244:-1
position: 117244
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 59
SIO_000628: feature:116394-116495:-1:exon

position:116394:-1
position: 116394
reference: sequence
type: ReverseStrandPosition
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position:116495:-1
position: 116495
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 60
SIO_000628: feature:116096-116269:-1:exon

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position: 116096
reference: sequence
type: ReverseStrandPosition
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position:116269:-1
position: 116269
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 61
SIO_000628: feature:115526-115819:-1:exon

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position: 115526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115819:-1
position: 115819
reference: sequence
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urn:…
SIO_000300: 62
SIO_000628: feature:114821-114886:-1:exon

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position: 114821
reference: sequence
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position:114886:-1
position: 114886
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 63
SIO_000628: feature:114574-114699:-1:exon

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position: 114574
reference: sequence
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position:114699:-1
position: 114699
reference: sequence
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urn:…
SIO_000300: 64
SIO_000628: feature:114028-114166:-1:exon

position:114028:-1
position: 114028
reference: sequence
type: ReverseStrandPosition
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position:114166:-1
position: 114166
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 65
SIO_000628: feature:113384-113565:-1:exon

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position: 113384
reference: sequence
type: ReverseStrandPosition
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position:113565:-1
position: 113565
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 66
SIO_000628: feature:112522-112677:-1:exon

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position: 112522
reference: sequence
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position:112677:-1
position: 112677
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 67
SIO_000628: feature:111891-112013:-1:exon

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position: 111891
reference: sequence
type: ReverseStrandPosition
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position:112013:-1
position: 112013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 68
SIO_000628: feature:111233-111335:-1:exon

position:111233:-1
position: 111233
reference: sequence
type: ReverseStrandPosition
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position:111335:-1
position: 111335
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 69
SIO_000628: feature:109809-109978:-1:exon

position:109809:-1
position: 109809
reference: sequence
type: ReverseStrandPosition
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position:109978:-1
position: 109978
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 70
SIO_000628: feature:108484-108585:-1:exon

position:108484:-1
position: 108484
reference: sequence
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position:108585:-1
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reference: sequence
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urn:…
SIO_000300: 71
SIO_000628: feature:106966-107370:-1:exon

position:106966:-1
position: 106966
reference: sequence
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position:107370:-1
position: 107370
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 72
SIO_000628: feature:106444-106613:-1:exon

position:106444:-1
position: 106444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106613:-1
position: 106613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 73
SIO_000628: feature:106123-106288:-1:exon

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position: 106123
reference: sequence
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position:106288:-1
position: 106288
reference: sequence
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urn:…
SIO_000300: 74
SIO_000628: feature:105753-105829:-1:exon

position:105753:-1
position: 105753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105829:-1
position: 105829
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 75
SIO_000628: feature:105102-105354:-1:exon

position:105102:-1
position: 105102
reference: sequence
type: ReverseStrandPosition
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position:105354:-1
position: 105354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 76
SIO_000628: feature:104728-104880:-1:exon

position:104728:-1
position: 104728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104880:-1
position: 104880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 77
SIO_000628: feature:103519-103824:-1:exon

position:103519:-1
position: 103519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103824:-1
position: 103824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 78
SIO_000628: feature:101673-102641:-1:exon

position:102641:-1
position: 102641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HERC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HERC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable E3 ubiquitin-protein ligase HERC1
translation: MAAMVPPVKLKWLEHLNSSWITEDSESIATREGVSVLYAKLVSNKEVVPLPQQVLCLKGPQLPDFERESLSSDEQDHYLDALLSSQLALAKMVCSDSPFAGALRKRLLVLQRVFYALSNKYHDKGKVKQQQHSPESSSGSTDVHSVSERPRSSTDALIEMGVRTGLSLLFALLRQSWMMPAAGPGLSLCNDVIHTAIEVVSSLPPLSLANESKIPPMGLDCLSQVTTFLKGVTIPNSGADTLGRRLASELLLGLAAQRGALRYLLEWIEMALGASAVVNTMEKSKLLQSPEGMISFDCFMSILTQMRRSLGSSADRSQWREPTRTSDGLCSLYEAALCLFEEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHLRSFLEHYCDKINSEIPPLPFPSSREHHNFLKLCLKLLSNHLALALAGGVATSILGRQAGPLRNLLFRLMDSSVPDEIQEVVIETLSVGATMLLPPLRERMELLHSLLPQGPDRWESLSKGQRMQLDIILTSLQDHTHVASLLGYSSPSDSTETSSLCISYGNLSDQAYAVQSSHPDTHLAEILMKTLLRNLGFYTDQAFGELEKNSDKFLLDTSSSENSQPAHLHELLCSLQKQLLAYCHINSVTENSSSVALLHKHLQLLLPHATDIYSRSATLLKESSWNGSVGVKLRDVIYVSAAGSMLSQIVNSLLLLPVSVARPLLSYLLDLLPPLDCLNRLLPAAALLEDQELQWPLHGGPELLEPAGVPLPQPAQSWVWLVDLERTVALLVGRCLGGMLQGPAVSPEEQDTAYWLKTPLFSDGVEMDIPHLDKCMSSLLEVALSGNEEQKPFDYKLRPEITVYVDLALGCTKEPARSLWISMQDYAVSKDWDTATLSNESLLDTVSRFVLAALLKHTSLLSQACGESRYQPGKALAEVYRCVYKVRSRLLACKNMELIQTRSSSRDRWMLDNQESADVDTQEHSFTRTIDEEAEMEEQAERDREEGHPEQEDEEEEREHEVMTAGKIFQCFLSAREVARSRERDRMGSGTGPRLDDGPAPAQQERRISTDLTEGQDVYTAACNSVIHRCALLILGVSPVLEQLQKPREEGQLQQPPSAAPEGVGLMTRSESLTAESRSIYASSSYRLMKSRSESDLSQPESDEEGYSLSGRRNVDLDLAASHRKRGAMHSQMESLSDSWVRLKHSRDWLYTSSYSFVESDFDLSRSLGVHTLIENAVSFVSGDVGNSPGFKEPEESMSTSPQASIIAMEQQQLRAELRLEALHQILVLLSGMEEKGCVPLMGSRQVPGFQSSSLLTSVRLQFLAGCFGLGTVGHAGAKGESVRLHHYQDGIRAAKRSIQIEIQVAVHKIYQQLSATLERALQANKHHIEAQQRLLLVTVFALSVHYQPVDVSLAISTGLLNVLSQLCGTDTMLGQPLQLLPKTGISQLSTALKVASTRLLQILAITTGTYADKLSPKVVQSLLDLLCSQLKNLLSQAGVMLMVSFGEEEGEEGEVESKKADSNGDNEKRDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLLNIASQKCCSGVPLVGNLRTRLLALHVLEAVLPACESGVEDDQMAQVVERLFSLLSDCMWETPIAQAK…
SIO_010081: HERC1
subclass of: SO_0000673
so part of: HERC1
location: complement(join(102456..102641,103519..103824,104728..104880,105102..105354,105753..105829,106123..106288,106444..106613,106966..107370,108484..108585,109809..109978,111233..111335,111891..112013,112522..112677,113384..113565,114028..114166,114574..114699,114821..114886,115526..115819,116096..116269,116394..116495,117098..117244,117796..117910,118404..118603,119520..119650,120456..120656,121192..121319,122579..122706,123752..123957,124740..124953,125333..125603,125836..126010,126630..126830,128041..128093,129301..129569,130794..131014,131262..131383,132104..132335,132497..132613,133736..133896,134820..135018,135715..136490,137883..138403,138930..139013,139209..139448,140075..140251,140333..140443,140696..140802,141046..141201,142083..142276,143282..143519,144075..144195,144285..144500,144806..145077,152017..152068,152347..152467,153527..153833,155783..155954,157255..157375,157468..157582,158817..158990,159836..160057,160571..160762,161262..161394,161571..161723,162891..163112,163903..164028,164575..164740,165480..165614,166689..166860,166955..167099,168095..168222,168779..168922,170446..170542,171140..171451,173053..173247,173525..173620,174790..175719))
location: region:102456-175719:-1
so has part: feature:174790-175719:-1:exon
so has part: feature:173525-173620:-1:exon
so has part: feature:173053-173247:-1:exon
so has part: feature:171140-171451:-1:exon
so has part: feature:170446-170542:-1:exon
so has part: feature:168779-168922:-1:exon
so has part: feature:168095-168222:-1:exon
so has part: feature:166955-167099:-1:exon
so has part: feature:166689-166860:-1:exon
so has part: feature:165480-165614:-1:exon
so has part: feature:164575-164740:-1:exon
so has part: feature:163903-164028:-1:exon
so has part: feature:162891-163112:-1:exon
so has part: feature:161571-161723:-1:exon
so has part: feature:161262-161394:-1:exon
so has part: feature:160571-160762:-1:exon
so has part: feature:159836-160057:-1:exon
so has part: feature:158817-158990:-1:exon
so has part: feature:157468-157582:-1:exon
so has part: feature:157255-157375:-1:exon
so has part: feature:155783-155954:-1:exon
so has part: feature:153527-153833:-1:exon
so has part: feature:152347-152467:-1:exon
so has part: feature:152017-152068:-1:exon
so has part: feature:144806-145077:-1:exon
so has part: feature:144285-144500:-1:exon
so has part: feature:144075-144195:-1:exon
so has part: feature:143282-143519:-1:exon
so has part: feature:142083-142276:-1:exon
so has part: feature:141046-141201:-1:exon
so has part: feature:140696-140802:-1:exon
so has part: feature:140333-140443:-1:exon
so has part: feature:140075-140251:-1:exon
so has part: feature:139209-139448:-1:exon
so has part: feature:138930-139013:-1:exon
so has part: feature:137883-138403:-1:exon
so has part: feature:135715-136490:-1:exon
so has part: feature:134820-135018:-1:exon
so has part: feature:133736-133896:-1:exon
so has part: feature:132497-132613:-1:exon
so has part: feature:132104-132335:-1:exon
so has part: feature:131262-131383:-1:exon
so has part: feature:130794-131014:-1:exon
so has part: feature:129301-129569:-1:exon
so has part: feature:128041-128093:-1:exon
so has part: feature:126630-126830:-1:exon
so has part: feature:125836-126010:-1:exon
so has part: feature:125333-125603:-1:exon
so has part: feature:124740-124953:-1:exon
so has part: feature:123752-123957:-1:exon
so has part: feature:122579-122706:-1:exon
so has part: feature:121192-121319:-1:exon
so has part: feature:120456-120656:-1:exon
so has part: feature:119520-119650:-1:exon
so has part: feature:118404-118603:-1:exon
so has part: feature:117796-117910:-1:exon
so has part: feature:117098-117244:-1:exon
so has part: feature:116394-116495:-1:exon
so has part: feature:116096-116269:-1:exon
so has part: feature:115526-115819:-1:exon
so has part: feature:114821-114886:-1:exon
so has part: feature:114574-114699:-1:exon
so has part: feature:114028-114166:-1:exon
so has part: feature:113384-113565:-1:exon
so has part: feature:112522-112677:-1:exon
so has part: feature:111891-112013:-1:exon

XP_005051622.1
type: Protein
SIO_000068: ncbiprotein

position:102456:-1
position: 102456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175719:-1
position: 175719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174790-175719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:173525-173620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:173053-173247:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171140-171451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170446-170542:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168779-168922:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168095-168222:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:166955-167099:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166689-166860:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:165480-165614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:164575-164740:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:163903-164028:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:162891-163112:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:161571-161723:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:161262-161394:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:160571-160762:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:159836-160057:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:158817-158990:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:157468-157582:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157255-157375:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:155783-155954:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:153527-153833:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:152347-152467:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:152017-152068:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:144806-145077:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:144285-144500:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:144075-144195:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:143282-143519:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:142083-142276:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:141046-141201:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:140696-140802:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:140333-140443:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:140075-140251:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:139209-139448:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:138930-139013:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:137883-138403:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:135715-136490:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:134820-135018:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:133736-133896:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:132497-132613:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:132104-132335:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:131262-131383:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:130794-131014:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:129301-129569:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:128041-128093:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:126630-126830:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:125836-126010:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:125333-125603:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:124740-124953:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:123752-123957:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:122579-122706:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:121192-121319:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:120456-120656:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:119520-119650:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:118404-118603:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:117796-117910:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:117098-117244:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:116394-116495:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:116096-116269:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:115526-115819:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:114821-114886:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:114574-114699:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:114028-114166:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:113384-113565:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:112522-112677:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:111891-112013:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:111233-111335:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:109809-109978:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:108484-108585:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:106966-107370:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:106444-106613:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:106123-106288:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:105753-105829:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:105102-105354:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:104728-104880:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:103519-103824:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:102456-102641:-1:exon

DAPK2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DAPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(214306..260057)
location: region:214306-260057:-1
so has part: feature:214306-260057:-1:exon
subclass of: SO_0000010

101810950
type: Gene
SIO_000068: ncbigene

position:214306:-1
position: 214306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260057:-1
position: 260057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214306-260057:-1:exon

DAPK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DAPK2
product: death-associated protein kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016300874.1
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(214306..215258,215755..215835,216009..216098,220950..220995,222431..222583,226165..226191,226863..226911,228023..228152,229638..229776,233467..233688,245421..245517,252187..252243))
location: region:214306-252243:-1
so has part: feature:252187-252243:-1:exon
so has part: feature:245421-245517:-1:exon
so has part: feature:233467-233688:-1:exon
so has part: feature:229638-229776:-1:exon
so has part: feature:228023-228152:-1:exon
so has part: feature:226863-226911:-1:exon
so has part: feature:226165-226191:-1:exon
so has part: feature:222431-222583:-1:exon
so has part: feature:220950-220995:-1:exon
so has part: feature:216009-216098:-1:exon
so has part: feature:215755-215835:-1:exon
so has part: feature:214306-215258:-1:exon

position:252243:-1
position: 252243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252187-252243:-1:exon

position:252187:-1
position: 252187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245421-245517:-1:exon

position:245421:-1
position: 245421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245517:-1
position: 245517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:233467-233688:-1:exon

position:233467:-1
position: 233467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233688:-1
position: 233688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:229638-229776:-1:exon

position:229638:-1
position: 229638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:229776:-1
position: 229776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:228023-228152:-1:exon

position:228023:-1
position: 228023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228152:-1
position: 228152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:226863-226911:-1:exon

position:226863:-1
position: 226863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226911:-1
position: 226911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:226165-226191:-1:exon

position:226165:-1
position: 226165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226191:-1
position: 226191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:222431-222583:-1:exon

position:222431:-1
position: 222431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222583:-1
position: 222583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:220950-220995:-1:exon

position:220950:-1
position: 220950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220995:-1
position: 220995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:216009-216098:-1:exon

position:216009:-1
position: 216009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216098:-1
position: 216098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:215755-215835:-1:exon

position:215755:-1
position: 215755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215835:-1
position: 215835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:214306-215258:-1:exon

position:215258:-1
position: 215258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DAPK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DAPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein kinase 2 isoform X2
translation: MAFFKQQKVEDVYEIGEELGSGQFAIVKKCREKSTGVEYAAKFIKKRQSRASRRGVSRDEIAREVSILQQVLHSNIVQLHDIYENKTDVVLILELVSGGELFDFLAQKESLSEEEATRFIKQILDGVNYLHSKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHKIEDGVEFKNIFGTPEFVAPEIVNYEPLGLAADMWSIGVITYILLSGASPFLGETKQETLANITAVNYDFDEEFFSNTSDLAKDFIQKLLVKDTRKRLTIQEALSHPWITPMDKQQALVRKSSVVNMESFKRQYARRRWKLSYQIVSLCNHLSRSLVRRVLAQDESSRNCESDSEDLSQRKAPVQRRSSIS
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(215184..215258,215755..215835,216009..216098,220950..220995,222431..222583,226165..226191,226863..226911,228023..228152,229638..229776,233467..233688,245421..245482))
location: region:215184-245482:-1
so has part: feature:245421-245482:-1:exon
so has part: feature:233467-233688:-1:exon
so has part: feature:229638-229776:-1:exon
so has part: feature:228023-228152:-1:exon
so has part: feature:226863-226911:-1:exon
so has part: feature:226165-226191:-1:exon
so has part: feature:222431-222583:-1:exon
so has part: feature:220950-220995:-1:exon
so has part: feature:216009-216098:-1:exon
so has part: feature:215755-215835:-1:exon
so has part: feature:215184-215258:-1:exon

XP_016156360.1
type: Protein
SIO_000068: ncbiprotein

position:215184:-1
position: 215184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245482:-1
position: 245482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245421-245482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233467-233688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229638-229776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228023-228152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226863-226911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226165-226191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222431-222583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220950-220995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216009-216098:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:215755-215835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:215184-215258:-1:exon

DAPK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DAPK2
product: death-associated protein kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016300872.1
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(219085..220040,220950..220995,222431..222583,226165..226191,226863..226911,228023..228152,229638..229776,233467..233688,245421..245517,259978..260057))
location: region:219085-260057:-1
so has part: feature:259978-260057:-1:exon
so has part: feature:245421-245517:-1:exon
so has part: feature:233467-233688:-1:exon
so has part: feature:229638-229776:-1:exon
so has part: feature:228023-228152:-1:exon
so has part: feature:226863-226911:-1:exon
so has part: feature:226165-226191:-1:exon
so has part: feature:222431-222583:-1:exon
so has part: feature:220950-220995:-1:exon
so has part: feature:219085-220040:-1:exon

position:219085:-1
position: 219085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259978-260057:-1:exon

position:259978:-1
position: 259978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245421-245517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233467-233688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229638-229776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228023-228152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226863-226911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226165-226191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:222431-222583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:220950-220995:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219085-220040:-1:exon

position:220040:-1
position: 220040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DAPK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DAPK2
product: death-associated protein kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005051510.1
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(219085..220040,220950..220995,222431..222583,226165..226191,226863..226911,228023..228152,229638..229776,233467..233688,245421..245517,252187..252243))
location: region:219085-252243:-1
so has part: feature:252187-252243:-1:exon
so has part: feature:245421-245517:-1:exon
so has part: feature:233467-233688:-1:exon
so has part: feature:229638-229776:-1:exon
so has part: feature:228023-228152:-1:exon
so has part: feature:226863-226911:-1:exon
so has part: feature:226165-226191:-1:exon
so has part: feature:222431-222583:-1:exon
so has part: feature:220950-220995:-1:exon
so has part: feature:219085-220040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:252187-252243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:245421-245517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233467-233688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229638-229776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228023-228152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226863-226911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226165-226191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:222431-222583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:220950-220995:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219085-220040:-1:exon

DAPK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DAPK2
product: death-associated protein kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_016300873.1
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(219085..220040,220950..220995,222431..222583,226165..226191,226863..226911,228023..228152,229638..229776,233467..233688,245421..245517,251585..251628))
location: region:219085-251628:-1
so has part: feature:251585-251628:-1:exon
so has part: feature:245421-245517:-1:exon
so has part: feature:233467-233688:-1:exon
so has part: feature:229638-229776:-1:exon
so has part: feature:228023-228152:-1:exon
so has part: feature:226863-226911:-1:exon
so has part: feature:226165-226191:-1:exon
so has part: feature:222431-222583:-1:exon
so has part: feature:220950-220995:-1:exon
so has part: feature:219085-220040:-1:exon

position:251628:-1
position: 251628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251585-251628:-1:exon

position:251585:-1
position: 251585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245421-245517:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:233467-233688:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229638-229776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228023-228152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226863-226911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226165-226191:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:222431-222583:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:220950-220995:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219085-220040:-1:exon

DAPK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DAPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein kinase 2 isoform X1
translation: MAFFKQQKVEDVYEIGEELGSGQFAIVKKCREKSTGVEYAAKFIKKRQSRASRRGVSRDEIAREVSILQQVLHSNIVQLHDIYENKTDVVLILELVSGGELFDFLAQKESLSEEEATRFIKQILDGVNYLHSKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHKIEDGVEFKNIFGTPEFVAPEIVNYEPLGLAADMWSIGVITYILLSGASPFLGETKQETLANITAVNYDFDEEFFSNTSDLAKDFIQKLLVKDTRKRLTIQEALSHPWITLEDESKVQEPRKVESTQLKTKRLREYTIKCHSSMPPNNTYINFERFARIVEDISQVERGFGALAASHGSLQEDMDALLSIYNEKEAWYKEESESVRHELSQLKYECRKVESLKRHLHAEIVAVGTSLAGVGGKYSELQGHYESLRQELAGELSWIQDLMSSFQLENEACVNGNFVFNKDINESLMELLNRSCCEEFLAGLNLDVTESHQKH
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(219405..220040,220950..220995,222431..222583,226165..226191,226863..226911,228023..228152,229638..229776,233467..233688,245421..245482))
location: region:219405-245482:-1
so has part: feature:245421-245482:-1:exon
so has part: feature:233467-233688:-1:exon
so has part: feature:229638-229776:-1:exon
so has part: feature:228023-228152:-1:exon
so has part: feature:226863-226911:-1:exon
so has part: feature:226165-226191:-1:exon
so has part: feature:222431-222583:-1:exon
so has part: feature:220950-220995:-1:exon
so has part: feature:219405-220040:-1:exon

XP_016156358.1
type: Protein
SIO_000068: ncbiprotein

position:219405:-1
position: 219405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245421-245482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233467-233688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229638-229776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228023-228152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226863-226911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226165-226191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222431-222583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220950-220995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:219405-220040:-1:exon

DAPK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DAPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein kinase 2 isoform X1
translation: MAFFKQQKVEDVYEIGEELGSGQFAIVKKCREKSTGVEYAAKFIKKRQSRASRRGVSRDEIAREVSILQQVLHSNIVQLHDIYENKTDVVLILELVSGGELFDFLAQKESLSEEEATRFIKQILDGVNYLHSKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHKIEDGVEFKNIFGTPEFVAPEIVNYEPLGLAADMWSIGVITYILLSGASPFLGETKQETLANITAVNYDFDEEFFSNTSDLAKDFIQKLLVKDTRKRLTIQEALSHPWITLEDESKVQEPRKVESTQLKTKRLREYTIKCHSSMPPNNTYINFERFARIVEDISQVERGFGALAASHGSLQEDMDALLSIYNEKEAWYKEESESVRHELSQLKYECRKVESLKRHLHAEIVAVGTSLAGVGGKYSELQGHYESLRQELAGELSWIQDLMSSFQLENEACVNGNFVFNKDINESLMELLNRSCCEEFLAGLNLDVTESHQKH
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(219405..220040,220950..220995,222431..222583,226165..226191,226863..226911,228023..228152,229638..229776,233467..233688,245421..245482))
location: region:219405-245482:-1
so has part: feature:245421-245482:-1:exon
so has part: feature:233467-233688:-1:exon
so has part: feature:229638-229776:-1:exon
so has part: feature:228023-228152:-1:exon
so has part: feature:226863-226911:-1:exon
so has part: feature:226165-226191:-1:exon
so has part: feature:222431-222583:-1:exon
so has part: feature:220950-220995:-1:exon
so has part: feature:219405-220040:-1:exon

XP_016156359.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245421-245482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233467-233688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229638-229776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228023-228152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226863-226911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226165-226191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222431-222583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220950-220995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:219405-220040:-1:exon

DAPK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DAPK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death-associated protein kinase 2 isoform X1
translation: MAFFKQQKVEDVYEIGEELGSGQFAIVKKCREKSTGVEYAAKFIKKRQSRASRRGVSRDEIAREVSILQQVLHSNIVQLHDIYENKTDVVLILELVSGGELFDFLAQKESLSEEEATRFIKQILDGVNYLHSKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHKIEDGVEFKNIFGTPEFVAPEIVNYEPLGLAADMWSIGVITYILLSGASPFLGETKQETLANITAVNYDFDEEFFSNTSDLAKDFIQKLLVKDTRKRLTIQEALSHPWITLEDESKVQEPRKVESTQLKTKRLREYTIKCHSSMPPNNTYINFERFARIVEDISQVERGFGALAASHGSLQEDMDALLSIYNEKEAWYKEESESVRHELSQLKYECRKVESLKRHLHAEIVAVGTSLAGVGGKYSELQGHYESLRQELAGELSWIQDLMSSFQLENEACVNGNFVFNKDINESLMELLNRSCCEEFLAGLNLDVTESHQKH
SIO_010081: DAPK2
subclass of: SO_0000673
so part of: DAPK2
location: complement(join(219405..220040,220950..220995,222431..222583,226165..226191,226863..226911,228023..228152,229638..229776,233467..233688,245421..245482))
location: region:219405-245482:-1
so has part: feature:245421-245482:-1:exon
so has part: feature:233467-233688:-1:exon
so has part: feature:229638-229776:-1:exon
so has part: feature:228023-228152:-1:exon
so has part: feature:226863-226911:-1:exon
so has part: feature:226165-226191:-1:exon
so has part: feature:222431-222583:-1:exon
so has part: feature:220950-220995:-1:exon
so has part: feature:219405-220040:-1:exon

XP_005051567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:245421-245482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:233467-233688:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229638-229776:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:228023-228152:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:226863-226911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:226165-226191:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:222431-222583:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:220950-220995:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:219405-220040:-1:exon

TBC1D2B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(245436..279821)
location: region:245436-279821:-1
so has part: feature:245436-279821:-1:exon
subclass of: SO_0000010

101810480
type: Gene
SIO_000068: ncbigene

position:245436:-1
position: 245436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279821:-1
position: 279821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245436-279821:-1:exon

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016300870.1
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(245436..245517,259978..260219,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270672,271597..271754,275025..275190,279379..279820))
location: region:245436-279820:-1
so has part: feature:279379-279820:-1:exon
so has part: feature:275025-275190:-1:exon
so has part: feature:271597-271754:-1:exon
so has part: feature:270446-270672:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:259978-260219:-1:exon
so has part: feature:245436-245517:-1:exon

position:279820:-1
position: 279820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279379-279820:-1:exon

position:279379:-1
position: 279379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:275025-275190:-1:exon

position:275025:-1
position: 275025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275190:-1
position: 275190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:271597-271754:-1:exon

position:271597:-1
position: 271597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271754:-1
position: 271754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:270446-270672:-1:exon

position:270446:-1
position: 270446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270672:-1
position: 270672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268715-269107:-1:exon

position:268715:-1
position: 268715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269107:-1
position: 269107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:267350-267460:-1:exon

position:267350:-1
position: 267350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267460:-1
position: 267460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:265761-265954:-1:exon

position:265761:-1
position: 265761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265954:-1
position: 265954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:264419-264913:-1:exon

position:264419:-1
position: 264419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264913:-1
position: 264913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:263204-263321:-1:exon

position:263204:-1
position: 263204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263321:-1
position: 263321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:262379-262564:-1:exon

position:262379:-1
position: 262379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262564:-1
position: 262564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:261919-262040:-1:exon

position:261919:-1
position: 261919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262040:-1
position: 262040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:259978-260219:-1:exon

position:260219:-1
position: 260219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:245436-245517:-1:exon

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005051508.2
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(259139..260219,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270621,271597..271754,275025..275190,279379..279821))
location: region:259139-279821:-1
so has part: feature:279379-279821:-1:exon
so has part: feature:275025-275190:-1:exon
so has part: feature:271597-271754:-1:exon
so has part: feature:270446-270621:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:259139-260219:-1:exon

position:259139:-1
position: 259139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279379-279821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275025-275190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271597-271754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270446-270621:-1:exon

position:270621:-1
position: 270621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:268715-269107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267350-267460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265761-265954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264419-264913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263204-263321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262379-262564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261919-262040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259139-260219:-1:exon

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005051507.2
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(259139..260219,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270672,271597..271754,275025..275190,279379..279819))
location: region:259139-279819:-1
so has part: feature:279379-279819:-1:exon
so has part: feature:275025-275190:-1:exon
so has part: feature:271597-271754:-1:exon
so has part: feature:270446-270672:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:259139-260219:-1:exon

position:279819:-1
position: 279819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279379-279819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275025-275190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271597-271754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270446-270672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268715-269107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267350-267460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265761-265954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264419-264913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263204-263321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262379-262564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261919-262040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259139-260219:-1:exon

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_016300871.1
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(259139..260219,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270672,271597..271754,279379..279455))
location: region:259139-279455:-1
so has part: feature:279379-279455:-1:exon
so has part: feature:271597-271754:-1:exon
so has part: feature:270446-270672:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:259139-260219:-1:exon

position:279455:-1
position: 279455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279379-279455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271597-271754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270446-270672:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268715-269107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:267350-267460:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265761-265954:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264419-264913:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263204-263321:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:262379-262564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261919-262040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:259139-260219:-1:exon

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X2
translation: MTYWLQELQQKRWEYCNNLDAAKRDSRTSPTPSDFSKGLVAKDSPDLSILSQNASAERARNILAVETSPTDLVGEQAASQPAPVQASAINFSLKQWSTEIKNSMSSLRKGSNENRKSVFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGNKAKRPLKEMIGSSKNRTSSDSSPTEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLMSQKELVRLLQQTVRSSQYDKYFTSHLCEGVPKDTLELLHQKDNQILGLNNQLEKLNLEKDSLQQEVRNLKCKVGEVNERLGMLMETIQAKDEVIMKLSRQLSECEDSTSSHSGAVNSPSATCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSALRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKVEPSEQPEQAFFKPHLVSEYDIYGFQTVPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMIRCVELKNLIRSGIPHEHRSKVWRWCVNLHVKKFKDSAIPGYFQSLLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVAIVEVFMPRDYYTKTLLGSQVDQRVFKDLMSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLTAIAFGDLNPFPLRQIRNRRACHLEKVRLELTELEAIREDFLRERDTCVAQEKRDLISDDEEDS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(260018..260219,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270621,271597..271754,275025..275190,279379..279514))
location: region:260018-279514:-1
so has part: feature:279379-279514:-1:exon
so has part: feature:275025-275190:-1:exon
so has part: feature:271597-271754:-1:exon
so has part: feature:270446-270621:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:260018-260219:-1:exon

XP_005051565.1
type: Protein
SIO_000068: ncbiprotein

position:260018:-1
position: 260018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279514:-1
position: 279514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279379-279514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275025-275190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271597-271754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270446-270621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268715-269107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267350-267460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265761-265954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264419-264913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263204-263321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262379-262564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261919-262040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260018-260219:-1:exon

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X1
translation: MTYWLQELQQKRWEYCNNLDAAKRDSRTSPTPSDFSKGLVAKDSPDLSILSQNASAERARNILAVETSPTDLVGEQAASQPAPVQASAINFSLKQWSTEIKNSMSSLRKGSNENRKSVFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGNKGLTSSAFPFDFGRIPHKAKRPLKEMIGSSKNRTSSDSSPTEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLMSQKELVRLLQQTVRSSQYDKYFTSHLCEGVPKDTLELLHQKDNQILGLNNQLEKLNLEKDSLQQEVRNLKCKVGEVNERLGMLMETIQAKDEVIMKLSRQLSECEDSTSSHSGAVNSPSATCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSALRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKVEPSEQPEQAFFKPHLVSEYDIYGFQTVPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMIRCVELKNLIRSGIPHEHRSKVWRWCVNLHVKKFKDSAIPGYFQSLLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVAIVEVFMPRDYYTKTLLGSQVDQRVFKDLMSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLTAIAFGDLNPFPLRQIRNRRACHLEKVRLELTELEAIREDFLRERDTCVAQEKRDLISDDEEDS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(260018..260219,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270672,271597..271754,275025..275190,279379..279514))
location: region:260018-279514:-1
so has part: feature:279379-279514:-1:exon
so has part: feature:275025-275190:-1:exon
so has part: feature:271597-271754:-1:exon
so has part: feature:270446-270672:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:260018-260219:-1:exon

XP_016156356.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279379-279514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275025-275190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271597-271754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270446-270672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268715-269107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267350-267460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265761-265954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264419-264913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263204-263321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262379-262564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261919-262040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260018-260219:-1:exon

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X1
translation: MTYWLQELQQKRWEYCNNLDAAKRDSRTSPTPSDFSKGLVAKDSPDLSILSQNASAERARNILAVETSPTDLVGEQAASQPAPVQASAINFSLKQWSTEIKNSMSSLRKGSNENRKSVFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGNKGLTSSAFPFDFGRIPHKAKRPLKEMIGSSKNRTSSDSSPTEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLMSQKELVRLLQQTVRSSQYDKYFTSHLCEGVPKDTLELLHQKDNQILGLNNQLEKLNLEKDSLQQEVRNLKCKVGEVNERLGMLMETIQAKDEVIMKLSRQLSECEDSTSSHSGAVNSPSATCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSALRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKVEPSEQPEQAFFKPHLVSEYDIYGFQTVPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMIRCVELKNLIRSGIPHEHRSKVWRWCVNLHVKKFKDSAIPGYFQSLLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVAIVEVFMPRDYYTKTLLGSQVDQRVFKDLMSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLTAIAFGDLNPFPLRQIRNRRACHLEKVRLELTELEAIREDFLRERDTCVAQEKRDLISDDEEDS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(260018..260219,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270672,271597..271754,275025..275190,279379..279514))
location: region:260018-279514:-1
so has part: feature:279379-279514:-1:exon
so has part: feature:275025-275190:-1:exon
so has part: feature:271597-271754:-1:exon
so has part: feature:270446-270672:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:260018-260219:-1:exon

XP_005051564.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279379-279514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275025-275190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271597-271754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270446-270672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268715-269107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267350-267460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265761-265954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264419-264913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263204-263321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262379-262564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261919-262040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260018-260219:-1:exon

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X4
translation: MSSLRKGSNENRKSVFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGNKGLTSSAFPFDFGRIPHKAKRPLKEMIGSSKNRTSSDSSPTEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLMSQKELVRLLQQTVRSSQYDKYFTSHLCEGVPKDTLELLHQKDNQILGLNNQLEKLNLEKDSLQQEVRNLKCKVGEVNERLGMLMETIQAKDEVIMKLSRQLSECEDSTSSHSGAVNSPSATCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSALRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKVEPSEQPEQAFFKPHLVSEYDIYGFQTVPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMIRCVELKNLIRSGIPHEHRSKVWRWCVNLHVKKFKDSAIPGYFQSLLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVAIVEVFMPRDYYTKTLLGSQVDQRVFKDLMSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLTAIAFGDLNPFPLRQIRNRRACHLEKVRLELTELEAIREDFLRERDTCVAQEKRDLISDDEEDS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(260018..260219,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270672,271597..271747))
location: region:260018-271747:-1
so has part: feature:271597-271747:-1:exon
so has part: feature:270446-270672:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:260018-260219:-1:exon

XP_016156357.1
type: Protein
SIO_000068: ncbiprotein

position:271747:-1
position: 271747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271597-271747:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270446-270672:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268715-269107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:267350-267460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265761-265954:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:264419-264913:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263204-263321:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:262379-262564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261919-262040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:260018-260219:-1:exon

TBC1D2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TBC1D2B
product: TBC1 domain family member 2B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005051509.2
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(260025..260167,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270672,271597..271754,275025..275190,279379..279819))
location: region:260025-279819:-1
so has part: feature:279379-279819:-1:exon
so has part: feature:275025-275190:-1:exon
so has part: feature:271597-271754:-1:exon
so has part: feature:270446-270672:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:260025-260167:-1:exon

position:260025:-1
position: 260025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279379-279819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275025-275190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271597-271754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270446-270672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268715-269107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267350-267460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265761-265954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264419-264913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263204-263321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262379-262564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261919-262040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260025-260167:-1:exon

position:260167:-1
position: 260167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBC1D2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TBC1D2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TBC1 domain family member 2B isoform X3
translation: MTYWLQELQQKRWEYCNNLDAAKRDSRTSPTPSDFSKGLVAKDSPDLSILSQNASAERARNILAVETSPTDLVGEQAASQPAPVQASAINFSLKQWSTEIKNSMSSLRKGSNENRKSVFYTTEEWELLDPTPKDLEDSMALEEKRKHLAEGNKGLTSSAFPFDFGRIPHKAKRPLKEMIGSSKNRTSSDSSPTEWCSGSGSRLVSELQLKYQSQQEELEKLKKDLMSQKELVRLLQQTVRSSQYDKYFTSHLCEGVPKDTLELLHQKDNQILGLNNQLEKLNLEKDSLQQEVRNLKCKVGEVNERLGMLMETIQAKDEVIMKLSRQLSECEDSTSSHSGAVNSPSATCTNKELQELDRLKDNLQGYKTQNKFLNKEILELSALRRNAEAREREWQAKYTSLEAKLCQIESKYLILLQEMKTPVCSEDQSPAREVITQLLEDALKVEPSEQPEQAFFKPHLVSEYDIYGFQTVPEDDDEEKLVAKSRALDLRSLSLSENREISTGVKWENYLASTMNREMIRCVELKNLIRSGIPHEHRSKVWRWCVNLHVKKFKDSAIPGYFQSLLQKALEKPNPASKQIELDLLRTLPNNKHYSSPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAIALLYLEQEDAFWCLVAIVEVFMPRDYYTKTLLGSQVDQRVFKDLMSEKLPRLHAHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARSGTAGPVTWRRCGWS
SIO_010081: TBC1D2B
subclass of: SO_0000673
so part of: TBC1D2B
location: complement(join(260119..260167,261919..262040,262379..262564,263204..263321,264419..264913,265761..265954,267350..267460,268715..269107,270446..270672,271597..271754,275025..275190,279379..279514))
location: region:260119-279514:-1
so has part: feature:279379-279514:-1:exon
so has part: feature:275025-275190:-1:exon
so has part: feature:271597-271754:-1:exon
so has part: feature:270446-270672:-1:exon
so has part: feature:268715-269107:-1:exon
so has part: feature:267350-267460:-1:exon
so has part: feature:265761-265954:-1:exon
so has part: feature:264419-264913:-1:exon
so has part: feature:263204-263321:-1:exon
so has part: feature:262379-262564:-1:exon
so has part: feature:261919-262040:-1:exon
so has part: feature:260119-260167:-1:exon

XP_005051566.1
type: Protein
SIO_000068: ncbiprotein

position:260119:-1
position: 260119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279379-279514:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:275025-275190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271597-271754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270446-270672:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:268715-269107:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:267350-267460:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265761-265954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264419-264913:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:263204-263321:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:262379-262564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:261919-262040:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260119-260167:-1:exon

CIB2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CIB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(301879..336276)
location: region:301879-336276:-1
so has part: feature:301879-336276:-1:exon
subclass of: SO_0000010

101811395
type: Gene
SIO_000068: ncbigene

position:301879:-1
position: 301879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336276:-1
position: 336276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301879-336276:-1:exon

CIB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CIB2
product: calcium and integrin binding family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051512.1
SIO_010081: CIB2
subclass of: SO_0000673
so part of: CIB2
location: complement(join(301879..302166,307663..307858,307943..308090,314910..315021,325572..325606,336216..336276))
location: region:301879-336276:-1
so has part: feature:336216-336276:-1:exon
so has part: feature:325572-325606:-1:exon
so has part: feature:314910-315021:-1:exon
so has part: feature:307943-308090:-1:exon
so has part: feature:307663-307858:-1:exon
so has part: feature:301879-302166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336216-336276:-1:exon

position:336216:-1
position: 336216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:325572-325606:-1:exon

position:325572:-1
position: 325572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325606:-1
position: 325606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314910-315021:-1:exon

position:314910:-1
position: 314910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315021:-1
position: 315021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:307943-308090:-1:exon

position:307943:-1
position: 307943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308090:-1
position: 308090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307663-307858:-1:exon

position:307663:-1
position: 307663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307858:-1
position: 307858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:301879-302166:-1:exon

position:302166:-1
position: 302166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CIB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CIB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium and integrin-binding family member 2
translation: MGNKQTIFTDEQLDAYQDCTFFTRKEILRLHGRYHEMAPNVVPMDYTKDPDVKLPMQLIINMPELKENPFKERIVSSFSEDGEGSLSFNDFVDMFSVLSEMAPRELKAIYAFKIYDFNTDNFICKADLEKTLNKLTREELTEEEITLVCEKVIEEADMDGDGKLGFADFENMISKAPDFLSTFHIRI
SIO_010081: CIB2
subclass of: SO_0000673
so part of: CIB2
location: complement(join(302145..302166,307663..307858,307943..308090,314910..315021,325572..325606,336216..336266))
location: region:302145-336266:-1
so has part: feature:336216-336266:-1:exon
so has part: feature:325572-325606:-1:exon
so has part: feature:314910-315021:-1:exon
so has part: feature:307943-308090:-1:exon
so has part: feature:307663-307858:-1:exon
so has part: feature:302145-302166:-1:exon

XP_005051569.1
type: Protein
SIO_000068: ncbiprotein

position:302145:-1
position: 302145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336266:-1
position: 336266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336216-336266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:325572-325606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314910-315021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307943-308090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307663-307858:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:302145-302166:-1:exon

IDH3A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: IDH3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 344264..355763
location: region:344264-355763:1
so has part: feature:344264-355763:1:exon
subclass of: SO_0000010

101821410
type: Gene
SIO_000068: ncbigene

position:344264:1
position: 344264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355763:1
position: 355763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344264-355763:1:exon

IDH3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IDH3A
product: isocitrate dehydrogenase 3 (NAD+) alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051566.1
SIO_010081: IDH3A
subclass of: SO_0000673
so part of: IDH3A
location: join(344264..344362,345354..345536,347209..347292,348383..348497,348982..349169,349517..349650,350259..350361,350529..350593,352721..352805,353477..353629,355518..355763)
location: region:344264-355763:1
so has part: feature:344264-344362:1:exon
so has part: feature:345354-345536:1:exon
so has part: feature:347209-347292:1:exon
so has part: feature:348383-348497:1:exon
so has part: feature:348982-349169:1:exon
so has part: feature:349517-349650:1:exon
so has part: feature:350259-350361:1:exon
so has part: feature:350529-350593:1:exon
so has part: feature:352721-352805:1:exon
so has part: feature:353477-353629:1:exon
so has part: feature:355518-355763:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:344264-344362:1:exon

position:344362:1
position: 344362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345354-345536:1:exon

position:345354:1
position: 345354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345536:1
position: 345536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347209-347292:1:exon

position:347209:1
position: 347209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347292:1
position: 347292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:348383-348497:1:exon

position:348383:1
position: 348383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348497:1
position: 348497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:348982-349169:1:exon

position:348982:1
position: 348982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349169:1
position: 349169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:349517-349650:1:exon

position:349517:1
position: 349517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349650:1
position: 349650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:350259-350361:1:exon

position:350259:1
position: 350259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350361:1
position: 350361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:350529-350593:1:exon

position:350529:1
position: 350529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350593:1
position: 350593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:352721-352805:1:exon

position:352721:1
position: 352721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352805:1
position: 352805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:353477-353629:1:exon

position:353477:1
position: 353477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353629:1
position: 353629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:355518-355763:1:exon

position:355518:1
position: 355518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IDH3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IDH3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial
translation: MKDLYHENTYTAQSTSHFHLTVLPSSSAMWPALFAIGDLKQYDLKKQICWNIVKLVKSHLYSKRASFCFGFLQVSRLLGAFKSQKKVTRSFGNAVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVSAIQGPGGKWMIPPEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFDLYANVRPCVSIEGYKTPYTDVNIVTIRENTEGEYSGIEHVIVDGVVQSIKLITEEASKRIAEFAFEYARNNQRSHVTAVHKANIMRMSDGLFLRKCREAAENCKDIKFNEMYLDTVCLNMVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGVAIFESVHGTAPDIAGKDMANPTALLLSAVMMLRHMGMHKHASKIESACFDTIKDGKVLTKDLGGNAKCSEFTEEICRRVRDKD
SIO_010081: IDH3A
subclass of: SO_0000673
so part of: IDH3A
location: join(344264..344362,345354..345536,347209..347292,348383..348497,348982..349169,349517..349650,350259..350361,350529..350593,352721..352805,353477..353629,355518..355601)
location: region:344264-355601:1
so has part: feature:344264-344362:1:exon
so has part: feature:345354-345536:1:exon
so has part: feature:347209-347292:1:exon
so has part: feature:348383-348497:1:exon
so has part: feature:348982-349169:1:exon
so has part: feature:349517-349650:1:exon
so has part: feature:350259-350361:1:exon
so has part: feature:350529-350593:1:exon
so has part: feature:352721-352805:1:exon
so has part: feature:353477-353629:1:exon
so has part: feature:355518-355601:1:exon

XP_005051623.1
type: Protein
SIO_000068: ncbiprotein

position:355601:1
position: 355601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:344264-344362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:345354-345536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347209-347292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348383-348497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348982-349169:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:349517-349650:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:350259-350361:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:350529-350593:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:352721-352805:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:353477-353629:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355518-355601:1:exon

ACSBG1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ACSBG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(358019..394180)
location: region:358019-394180:-1
so has part: feature:358019-394180:-1:exon
subclass of: SO_0000010

101811204
type: Gene
SIO_000068: ncbigene

position:358019:-1
position: 358019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394180:-1
position: 394180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358019-394180:-1:exon

ACSBG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ACSBG1
product: acyl-CoA synthetase bubblegum family member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051511.2
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(358019..358368,359328..359574,360572..360711,362441..362658,363223..363456,364057..364238,364714..364890,367853..368002,370620..370700,372442..372562,373348..373436,374123..374340,382697..382779,393920..394180))
location: region:358019-394180:-1
so has part: feature:393920-394180:-1:exon
so has part: feature:382697-382779:-1:exon
so has part: feature:374123-374340:-1:exon
so has part: feature:373348-373436:-1:exon
so has part: feature:372442-372562:-1:exon
so has part: feature:370620-370700:-1:exon
so has part: feature:367853-368002:-1:exon
so has part: feature:364714-364890:-1:exon
so has part: feature:364057-364238:-1:exon
so has part: feature:363223-363456:-1:exon
so has part: feature:362441-362658:-1:exon
so has part: feature:360572-360711:-1:exon
so has part: feature:359328-359574:-1:exon
so has part: feature:358019-358368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:393920-394180:-1:exon

position:393920:-1
position: 393920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382697-382779:-1:exon

position:382697:-1
position: 382697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382779:-1
position: 382779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:374123-374340:-1:exon

position:374123:-1
position: 374123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374340:-1
position: 374340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:373348-373436:-1:exon

position:373348:-1
position: 373348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373436:-1
position: 373436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:372442-372562:-1:exon

position:372442:-1
position: 372442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372562:-1
position: 372562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:370620-370700:-1:exon

position:370620:-1
position: 370620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370700:-1
position: 370700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:367853-368002:-1:exon

position:367853:-1
position: 367853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368002:-1
position: 368002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:364714-364890:-1:exon

position:364714:-1
position: 364714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364890:-1
position: 364890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:364057-364238:-1:exon

position:364057:-1
position: 364057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:364238:-1
position: 364238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:363223-363456:-1:exon

position:363223:-1
position: 363223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363456:-1
position: 363456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:362441-362658:-1:exon

position:362441:-1
position: 362441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362658:-1
position: 362658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:360572-360711:-1:exon

position:360572:-1
position: 360572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360711:-1
position: 360711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:359328-359574:-1:exon

position:359328:-1
position: 359328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359574:-1
position: 359574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:358019-358368:-1:exon

position:358368:-1
position: 358368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACSBG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ACSBG1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: long-chain-fatty-acid--CoA ligase ACSBG1
translation: MLISERSSFCSSSLLLSYYVLFFLTNNQLLLVSLVLQAAHLCLICTVLGILVTSFAGFASMPNSGEALRKQLQDENARNVSGSCENGTFTDAQPVCRDLLPHSEETQGEGIEPTESLWTSFADGRVRLRIDNSCPQTPITVHQMFKESLEKYGSLNALASKRNGKWEKITFSEYYCLCRKVAKSFLKLGLERFHSVAILGFNSPEWFISAVGAVFAGGIVTGIYATNSPEACYYMVHDSKTDIMVVENQKQLDKIMQIWNRLPHLKAVVLYKDSIAERHPNLYTMEEFLELGGDVSDSTLDDIINSQKPNQCCVLIYTSGTTGKPKGAMLSHDNITWTSAHCSRAGGMQPAEVQQESIVSYLPLSHVAAQMYDLWTGIKWGEQVYFAEPDALKGSLINTLKEVQPTSHMGVPRVWEKIMEKLQDASAQSGFMKKKMLSWAMSLSLERHLMGSNSSGLQQLWTRLADYLVLAKIRNALGLSSCQKHFCGAAPLNRETLDFFLGLNITLYEAYGMSETTGPHCLSGPCVYRQHSCGKPPPGCRVKLVDKDAEGNGEICFWGRTVFMGYLNMEDRTKETFDEEGWLHSGDLGKLDKDGFLYVTGRIKDLIITAGGENVPPIPIEDAVKKELPIVSNAMVIGDKKKFLSMFLTLKSVLDPDTSDPTDILTEQARDFCQRSGSKATRVSEIVATRDQAIYRAIQEGIDRVNSTATNRVHCIHKWIVLPRDFSIAGGELGPTMKLKRLAVLEKYRNEVDSFYKE
SIO_010081: ACSBG1
subclass of: SO_0000673
so part of: ACSBG1
location: complement(join(358292..358368,359328..359574,360572..360711,362441..362658,363223..363456,364057..364238,364714..364890,367853..368002,370620..370700,372442..372562,373348..373436,374123..374340,382697..382779,393920..394180))
location: region:358292-394180:-1
so has part: feature:393920-394180:-1:exon
so has part: feature:382697-382779:-1:exon
so has part: feature:374123-374340:-1:exon
so has part: feature:373348-373436:-1:exon
so has part: feature:372442-372562:-1:exon
so has part: feature:370620-370700:-1:exon
so has part: feature:367853-368002:-1:exon
so has part: feature:364714-364890:-1:exon
so has part: feature:364057-364238:-1:exon
so has part: feature:363223-363456:-1:exon
so has part: feature:362441-362658:-1:exon
so has part: feature:360572-360711:-1:exon
so has part: feature:359328-359574:-1:exon
so has part: feature:358292-358368:-1:exon

XP_005051568.2
type: Protein
SIO_000068: ncbiprotein

position:358292:-1
position: 358292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393920-394180:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382697-382779:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:374123-374340:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:373348-373436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:372442-372562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370620-370700:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:367853-368002:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:364714-364890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:364057-364238:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:363223-363456:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:362441-362658:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:360572-360711:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:359328-359574:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:358292-358368:-1:exon

DNAJA4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: DNAJA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 400141..406072
location: region:400141-406072:1
so has part: feature:400141-406072:1:exon
subclass of: SO_0000010

101811921
type: Gene
SIO_000068: ncbigene

position:400141:1
position: 400141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406072:1
position: 406072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400141-406072:1:exon

DNAJA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DNAJA4
product: DnaJ heat shock protein family (Hsp40) member A4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005051515.1
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(400141..400326,402140..402320,403218..403322,404068..404295,404386..404616,405144..405244,405328..406072)
location: region:400141-406072:1
so has part: feature:400141-400326:1:exon
so has part: feature:402140-402320:1:exon
so has part: feature:403218-403322:1:exon
so has part: feature:404068-404295:1:exon
so has part: feature:404386-404616:1:exon
so has part: feature:405144-405244:1:exon
so has part: feature:405328-406072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:400141-400326:1:exon

position:400326:1
position: 400326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:402140-402320:1:exon

position:402140:1
position: 402140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402320:1
position: 402320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403218-403322:1:exon

position:403218:1
position: 403218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403322:1
position: 403322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:404068-404295:1:exon

position:404068:1
position: 404068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404295:1
position: 404295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:404386-404616:1:exon

position:404386:1
position: 404386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404616:1
position: 404616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:405144-405244:1:exon

position:405144:1
position: 405144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405244:1
position: 405244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:405328-406072:1:exon

position:405328:1
position: 405328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DNAJA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 4 isoform X1
translation: MVKETEYYDILQVKPNASSEEIKRAYRKLALKYHPDKNPSEGERFKLISQAYEVLSDPKKRDLYDQGGEQAIKEGGLSGGSFSSPMDIFDMFFGGGGRMNRERRGKNVVHQLGVSLEDLYNGITRKLALQKNVICTKCEGYGGKRGAVEKCPVCKGRGMQVIVQQIGPGMVQQIQTVCPECKGQGERINPKDRCDNCNGCKVVREKKIIEVHVDKGMKDGQKIVFHGEGDQEPDLEPGDVIIVLDQKDHSVFQRRGHDLITKMRIQLSEALCGFRKTIETLDNRVLVISTRPGEVIKHGDLKCIYNEGMPVYKSPMDKGSLIIQFLVQFPEHYWLPREKLSLLEALLPQREDVMVTDEMDQVDLEDFDPNEQTYRNSAGEAYEEDEEGPRTGVQCQAS
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(400195..400326,402140..402320,403218..403322,404068..404295,404386..404616,405144..405244,405328..405546)
location: region:400195-405546:1
so has part: feature:400195-400326:1:exon
so has part: feature:402140-402320:1:exon
so has part: feature:403218-403322:1:exon
so has part: feature:404068-404295:1:exon
so has part: feature:404386-404616:1:exon
so has part: feature:405144-405244:1:exon
so has part: feature:405328-405546:1:exon

XP_005051572.1
type: Protein
SIO_000068: ncbiprotein

position:400195:1
position: 400195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405546:1
position: 405546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400195-400326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:402140-402320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403218-403322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404068-404295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404386-404616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405144-405244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405328-405546:1:exon

DNAJA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DNAJA4
product: DnaJ heat shock protein family (Hsp40) member A4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_016300864.1
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(400270..400326,403218..403322,404068..404295,404386..404616,405144..405244,405328..406072)
location: region:400270-406072:1
so has part: feature:400270-400326:1:exon
so has part: feature:403218-403322:1:exon
so has part: feature:404068-404295:1:exon
so has part: feature:404386-404616:1:exon
so has part: feature:405144-405244:1:exon
so has part: feature:405328-406072:1:exon

position:400270:1
position: 400270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400270-400326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:403218-403322:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:404068-404295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404386-404616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:405144-405244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405328-406072:1:exon

DNAJA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: DNAJA4
product: DnaJ heat shock protein family (Hsp40) member A4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_016300863.1
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(400703..401159,402140..402320,403218..403322,404068..404295,404386..404616,405144..405244,405328..406072)
location: region:400703-406072:1
so has part: feature:400703-401159:1:exon
so has part: feature:402140-402320:1:exon
so has part: feature:403218-403322:1:exon
so has part: feature:404068-404295:1:exon
so has part: feature:404386-404616:1:exon
so has part: feature:405144-405244:1:exon
so has part: feature:405328-406072:1:exon

position:400703:1
position: 400703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400703-401159:1:exon

position:401159:1
position: 401159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:402140-402320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403218-403322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404068-404295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404386-404616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405144-405244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405328-406072:1:exon

DNAJA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DNAJA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 4 isoform X2
translation: MLMQMSKFKLISQAYEVLSDPKKRDLYDQGGEQAIKEGGLSGGSFSSPMDIFDMFFGGGGRMNRERRGKNVVHQLGVSLEDLYNGITRKLALQKNVICTKCEGYGGKRGAVEKCPVCKGRGMQVIVQQIGPGMVQQIQTVCPECKGQGERINPKDRCDNCNGCKVVREKKIIEVHVDKGMKDGQKIVFHGEGDQEPDLEPGDVIIVLDQKDHSVFQRRGHDLITKMRIQLSEALCGFRKTIETLDNRVLVISTRPGEVIKHGDLKCIYNEGMPVYKSPMDKGSLIIQFLVQFPEHYWLPREKLSLLEALLPQREDVMVTDEMDQVDLEDFDPNEQTYRNSAGEAYEEDEEGPRTGVQCQAS
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(401139..401159,402140..402320,403218..403322,404068..404295,404386..404616,405144..405244,405328..405546)
location: region:401139-405546:1
so has part: feature:401139-401159:1:exon
so has part: feature:402140-402320:1:exon
so has part: feature:403218-403322:1:exon
so has part: feature:404068-404295:1:exon
so has part: feature:404386-404616:1:exon
so has part: feature:405144-405244:1:exon
so has part: feature:405328-405546:1:exon

XP_016156349.1
type: Protein
SIO_000068: ncbiprotein

position:401139:1
position: 401139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:401139-401159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:402140-402320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403218-403322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:404068-404295:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:404386-404616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:405144-405244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:405328-405546:1:exon

DNAJA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: DNAJA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 4 isoform X3
translation: MQVIVQQIGPGMVQQIQTVCPECKGQGERINPKDRCDNCNGCKVVREKKIIEVHVDKGMKDGQKIVFHGEGDQEPDLEPGDVIIVLDQKDHSVFQRRGHDLITKMRIQLSEALCGFRKTIETLDNRVLVISTRPGEVIKHGDLKCIYNEGMPVYKSPMDKGSLIIQFLVQFPEHYWLPREKLSLLEALLPQREDVMVTDEMDQVDLEDFDPNEQTYRNSAGEAYEEDEEGPRTGVQCQAS
SIO_010081: DNAJA4
subclass of: SO_0000673
so part of: DNAJA4
location: join(404124..404295,404386..404616,405144..405244,405328..405546)
location: region:404124-405546:1
so has part: feature:404124-404295:1:exon
so has part: feature:404386-404616:1:exon
so has part: feature:405144-405244:1:exon
so has part: feature:405328-405546:1:exon

XP_016156350.1
type: Protein
SIO_000068: ncbiprotein

position:404124:1
position: 404124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404124-404295:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:404386-404616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:405144-405244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405328-405546:1:exon

WDR61
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: WDR61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(405924..415282)
location: region:405924-415282:-1
so has part: feature:405924-415282:-1:exon
subclass of: SO_0000010

101811591
type: Gene
SIO_000068: ncbigene

position:405924:-1
position: 405924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415282:-1
position: 415282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405924-415282:-1:exon

WDR61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WDR61
product: WD repeat domain 61, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005051514.2
SIO_010081: WDR61
subclass of: SO_0000673
so part of: WDR61
location: complement(join(405924..407027,408330..408408,409037..409129,409832..409925,411924..412017,412330..412478,413511..413683,414440..414545,415001..415028,415131..415275))
location: region:405924-415275:-1
so has part: feature:415131-415275:-1:exon
so has part: feature:415001-415028:-1:exon
so has part: feature:414440-414545:-1:exon
so has part: feature:413511-413683:-1:exon
so has part: feature:412330-412478:-1:exon
so has part: feature:411924-412017:-1:exon
so has part: feature:409832-409925:-1:exon
so has part: feature:409037-409129:-1:exon
so has part: feature:408330-408408:-1:exon
so has part: feature:405924-407027:-1:exon

position:415275:-1
position: 415275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415131-415275:-1:exon

position:415131:-1
position: 415131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:415001-415028:-1:exon

position:415001:-1
position: 415001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415028:-1
position: 415028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:414440-414545:-1:exon

position:414440:-1
position: 414440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414545:-1
position: 414545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:413511-413683:-1:exon

position:413511:-1
position: 413511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413683:-1
position: 413683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:412330-412478:-1:exon

position:412330:-1
position: 412330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412478:-1
position: 412478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:411924-412017:-1:exon

position:411924:-1
position: 411924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412017:-1
position: 412017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:409832-409925:-1:exon

position:409832:-1
position: 409832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409925:-1
position: 409925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:409037-409129:-1:exon

position:409037:-1
position: 409037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409129:-1
position: 409129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:408330-408408:-1:exon

position:408330:-1
position: 408330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408408:-1
position: 408408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:405924-407027:-1:exon

position:407027:-1
position: 407027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDR61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WDR61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 61 isoform X2
translation: MTTQYGILFKQEQAHDDAIWSVAWGKNKNDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGAIAASSSLDAHIRLWDLDTGKQIKSIDAGPVDAWSLAFSPDSQYLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGSKIVSVGDDQEIHIYDCPV
SIO_010081: WDR61
subclass of: SO_0000673
so part of: WDR61
location: complement(join(406938..407027,408330..408408,409037..409129,409832..409925,411924..412017,412330..412478,413511..413683,414440..414545,415001..415028,415131..415142))
location: region:406938-415142:-1
so has part: feature:415131-415142:-1:exon
so has part: feature:415001-415028:-1:exon
so has part: feature:414440-414545:-1:exon
so has part: feature:413511-413683:-1:exon
so has part: feature:412330-412478:-1:exon
so has part: feature:411924-412017:-1:exon
so has part: feature:409832-409925:-1:exon
so has part: feature:409037-409129:-1:exon
so has part: feature:408330-408408:-1:exon
so has part: feature:406938-407027:-1:exon

XP_005051571.1
type: Protein
SIO_000068: ncbiprotein

position:406938:-1
position: 406938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415142:-1
position: 415142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415131-415142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415001-415028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414440-414545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413511-413683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412330-412478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411924-412017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409832-409925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:409037-409129:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:408330-408408:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:406938-407027:-1:exon

WDR61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: WDR61
product: WD repeat domain 61, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005051513.2
SIO_010081: WDR61
subclass of: SO_0000673
so part of: WDR61
location: complement(join(407063..408408,409037..409129,409832..409925,411924..412017,412330..412478,413511..413683,414440..414545,415001..415028,415131..415282))
location: region:407063-415282:-1
so has part: feature:415131-415282:-1:exon
so has part: feature:415001-415028:-1:exon
so has part: feature:414440-414545:-1:exon
so has part: feature:413511-413683:-1:exon
so has part: feature:412330-412478:-1:exon
so has part: feature:411924-412017:-1:exon
so has part: feature:409832-409925:-1:exon
so has part: feature:409037-409129:-1:exon
so has part: feature:407063-408408:-1:exon

position:407063:-1
position: 407063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415131-415282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415001-415028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414440-414545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413511-413683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412330-412478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411924-412017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409832-409925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:409037-409129:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:407063-408408:-1:exon

WDR61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: WDR61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 61 isoform X1
translation: MTTQYGILFKQEQAHDDAIWSVAWGKNKNDGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDISHTGAIAASSSLDAHIRLWDLDTGKQIKSIDAGPVDAWSLAFSPDSQYLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWLLFLQSPSSQQSLFGCAYLCFTLVLQLQACSDATSACYNEILQVVVI
SIO_010081: WDR61
subclass of: SO_0000673
so part of: WDR61
location: complement(join(408180..408408,409037..409129,409832..409925,411924..412017,412330..412478,413511..413683,414440..414545,415001..415028,415131..415142))
location: region:408180-415142:-1
so has part: feature:415131-415142:-1:exon
so has part: feature:415001-415028:-1:exon
so has part: feature:414440-414545:-1:exon
so has part: feature:413511-413683:-1:exon
so has part: feature:412330-412478:-1:exon
so has part: feature:411924-412017:-1:exon
so has part: feature:409832-409925:-1:exon
so has part: feature:409037-409129:-1:exon
so has part: feature:408180-408408:-1:exon

XP_005051570.1
type: Protein
SIO_000068: ncbiprotein

position:408180:-1
position: 408180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415131-415142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:415001-415028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414440-414545:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413511-413683:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412330-412478:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411924-412017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409832-409925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:409037-409129:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:408180-408408:-1:exon

CRABP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CRABP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 441619..456572
location: region:441619-456572:1
so has part: feature:441619-456572:1:exon
subclass of: SO_0000010

101812253
type: Gene
SIO_000068: ncbigene

position:441619:1
position: 441619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456572:1
position: 456572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441619-456572:1:exon

CRABP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CRABP1
product: cellular retinoic acid binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005051517.2
SIO_010081: CRABP1
subclass of: SO_0000673
so part of: CRABP1
location: join(441619..441771,443460..443638,446350..446463,456257..456572)
location: region:441619-456572:1
so has part: feature:441619-441771:1:exon
so has part: feature:443460-443638:1:exon
so has part: feature:446350-446463:1:exon
so has part: feature:456257-456572:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:441619-441771:1:exon

position:441771:1
position: 441771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443460-443638:1:exon

position:443460:1
position: 443460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443638:1
position: 443638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:446350-446463:1:exon

position:446350:1
position: 446350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446463:1
position: 446463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456257-456572:1:exon

position:456257:1
position: 456257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRABP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CRABP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular retinoic acid-binding protein 1
translation: MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKIGESFEEETVDGRKCRSLATWENENKIYCKQTLIEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
SIO_010081: CRABP1
subclass of: SO_0000673
so part of: CRABP1
location: join(441702..441771,443460..443638,446350..446463,456257..456307)
location: region:441702-456307:1
so has part: feature:441702-441771:1:exon
so has part: feature:443460-443638:1:exon
so has part: feature:446350-446463:1:exon
so has part: feature:456257-456307:1:exon

XP_005051574.1
type: Protein
SIO_000068: ncbiprotein

position:441702:1
position: 441702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456307:1
position: 456307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:441702-441771:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443460-443638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446350-446463:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:456257-456307:1:exon

IREB2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: IREB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 480296..507759
location: region:480296-507759:1
so has part: feature:480296-507759:1:exon
subclass of: SO_0000010

101812445
type: Gene
SIO_000068: ncbigene

position:480296:1
position: 480296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507759:1
position: 507759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480296-507759:1:exon

IREB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IREB2
product: iron responsive element binding protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005051518.1
SIO_010081: IREB2
subclass of: SO_0000673
so part of: IREB2
location: join(480296..480400,481063..481152,484180..484345,485351..485488,491716..491785,492807..492990,496476..496615,496996..497167,498260..498360,498774..498890,499472..499631,500452..500587,501164..501248,501850..502006,503084..503208,504431..504535,504750..504892,505362..505509,505598..505720,506241..506426,506989..507759)
location: region:480296-507759:1
so has part: feature:480296-480400:1:exon
so has part: feature:481063-481152:1:exon
so has part: feature:484180-484345:1:exon
so has part: feature:485351-485488:1:exon
so has part: feature:491716-491785:1:exon
so has part: feature:492807-492990:1:exon
so has part: feature:496476-496615:1:exon
so has part: feature:496996-497167:1:exon
so has part: feature:498260-498360:1:exon
so has part: feature:498774-498890:1:exon
so has part: feature:499472-499631:1:exon
so has part: feature:500452-500587:1:exon
so has part: feature:501164-501248:1:exon
so has part: feature:501850-502006:1:exon
so has part: feature:503084-503208:1:exon
so has part: feature:504431-504535:1:exon
so has part: feature:504750-504892:1:exon
so has part: feature:505362-505509:1:exon
so has part: feature:505598-505720:1:exon
so has part: feature:506241-506426:1:exon
so has part: feature:506989-507759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:480296-480400:1:exon

position:480400:1
position: 480400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481063-481152:1:exon

position:481063:1
position: 481063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481152:1
position: 481152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:484180-484345:1:exon

position:484180:1
position: 484180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484345:1
position: 484345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:485351-485488:1:exon

position:485351:1
position: 485351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485488:1
position: 485488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:491716-491785:1:exon

position:491716:1
position: 491716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491785:1
position: 491785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:492807-492990:1:exon

position:492807:1
position: 492807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492990:1
position: 492990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:496476-496615:1:exon

position:496476:1
position: 496476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496615:1
position: 496615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:496996-497167:1:exon

position:496996:1
position: 496996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497167:1
position: 497167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498260-498360:1:exon

position:498260:1
position: 498260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498360:1
position: 498360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:498774-498890:1:exon

position:498774:1
position: 498774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498890:1
position: 498890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:499472-499631:1:exon

position:499472:1
position: 499472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499631:1
position: 499631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:500452-500587:1:exon

position:500452:1
position: 500452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500587:1
position: 500587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:501164-501248:1:exon

position:501164:1
position: 501164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501248:1
position: 501248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:501850-502006:1:exon

position:501850:1
position: 501850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502006:1
position: 502006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:503084-503208:1:exon

position:503084:1
position: 503084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503208:1
position: 503208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:504431-504535:1:exon

position:504431:1
position: 504431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504535:1
position: 504535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:504750-504892:1:exon

position:504750:1
position: 504750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504892:1
position: 504892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:505362-505509:1:exon

position:505362:1
position: 505362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505509:1
position: 505509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:505598-505720:1:exon

position:505598:1
position: 505598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505720:1
position: 505720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:506241-506426:1:exon

position:506241:1
position: 506241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506426:1
position: 506426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:506989-507759:1:exon

position:506989:1
position: 506989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IREB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IREB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iron-responsive element-binding protein 2 isoform X1
translation: MDPPRTGNPYQPAIEALESHPEKKFYNVSKLGGAKYDSLPYSIRVLFESSVRNCDGFLVKETDAMNILDWKTKQSHVEVPFCPARVVLQDFTGIPAMVDFAAMREAVRNAGGDPVKVNPACPTDLTVDHSLQIDFSKWPETVLKNQEMEFGRNRERLQFFKWSSKVFENISIIPPETGMAHQVNLEYLSRVVFDVKDLLHPDSVVGTDSHMTMVNGLGILGWGVGGIEAEAVMLGMPLSLPLPHVVGCELTGTASPLATSIDIVLSITKHLRQVDVAGKFVEFFGSGVSQLSIADRTTIANMCPEYGAILSFFPVDNVTLEHLKHAGFDKAKLEVTEAYLKAVKLFRSDESSSREPEYSQVVQVSLGSIIPYVSGPKRSQDRVAVNNMKSDFQACLNEKSGVKGFQIAAEKQNDTVPVEYEGNEYKLSHGCVVIAAVISCTNNCNPSVMLAAGLLAKKAVEAGLAVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEVVGYGCSTCVGNTAPLPEAIRNAIKQGEIIACGVLSGTKNFEGRLCDCVRANYLASPPLVVAYAIAGTVRIDFDSEPLGTGFDGKSIYLRDIWPTRQELHTVEEECVISSMFRELKEKMEKGNKRWNLLEAPESTLFPWDLKSTYIRCPSFFDKLAKEAAPPAAVENAHVLLFLGDSVTTDHISPAGSIARSSAAAKYLSSRGLTPREFNSYGARRGNDAVMTRGTFANIKLLNKFIGKPAPKTVHFPSGQTLDVFEAAELYQKEGIPVIILAGKKYGLGSSRDWAAKGPFLLGVKAVLAESYEKVHRSQLIGIGIAPLQFRPGENPTTLGLTGREQFSIMFPPDLSPRMTLDVKTSTGKVFSVIALFENSMEITLYKNGGSLNFVARRFL
SIO_010081: IREB2
subclass of: SO_0000673
so part of: IREB2
location: join(480382..480400,481063..481152,484180..484345,485351..485488,491716..491785,492807..492990,496476..496615,496996..497167,498260..498360,498774..498890,499472..499631,500452..500587,501164..501248,501850..502006,503084..503208,504431..504535,504750..504892,505362..505509,505598..505720,506241..506426,506989..507099)
location: region:480382-507099:1
so has part: feature:480382-480400:1:exon
so has part: feature:481063-481152:1:exon
so has part: feature:484180-484345:1:exon
so has part: feature:485351-485488:1:exon
so has part: feature:491716-491785:1:exon
so has part: feature:492807-492990:1:exon
so has part: feature:496476-496615:1:exon
so has part: feature:496996-497167:1:exon
so has part: feature:498260-498360:1:exon
so has part: feature:498774-498890:1:exon
so has part: feature:499472-499631:1:exon
so has part: feature:500452-500587:1:exon
so has part: feature:501164-501248:1:exon
so has part: feature:501850-502006:1:exon
so has part: feature:503084-503208:1:exon
so has part: feature:504431-504535:1:exon
so has part: feature:504750-504892:1:exon
so has part: feature:505362-505509:1:exon
so has part: feature:505598-505720:1:exon
so has part: feature:506241-506426:1:exon
so has part: feature:506989-507099:1:exon

XP_005051575.1
type: Protein
SIO_000068: ncbiprotein

position:480382:1
position: 480382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507099:1
position: 507099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480382-480400:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481063-481152:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484180-484345:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485351-485488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:491716-491785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:492807-492990:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:496476-496615:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:496996-497167:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498260-498360:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498774-498890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:499472-499631:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:500452-500587:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:501164-501248:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:501850-502006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:503084-503208:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:504431-504535:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:504750-504892:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:505362-505509:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:505598-505720:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:506241-506426:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:506989-507099:1:exon

IREB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: IREB2
product: iron responsive element binding protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_016300888.1
SIO_010081: IREB2
subclass of: SO_0000673
so part of: IREB2
location: join(489966..490061,491716..491785,492807..492990,496476..496615,496996..497167,498260..498360,498774..498890,499472..499631,500452..500587,501164..501248,501850..502006,503084..503208,504431..504535,504750..504892,505362..505509,505598..505720,506241..506426,506989..507759)
location: region:489966-507759:1
so has part: feature:489966-490061:1:exon
so has part: feature:491716-491785:1:exon
so has part: feature:492807-492990:1:exon
so has part: feature:496476-496615:1:exon
so has part: feature:496996-497167:1:exon
so has part: feature:498260-498360:1:exon
so has part: feature:498774-498890:1:exon
so has part: feature:499472-499631:1:exon
so has part: feature:500452-500587:1:exon
so has part: feature:501164-501248:1:exon
so has part: feature:501850-502006:1:exon
so has part: feature:503084-503208:1:exon
so has part: feature:504431-504535:1:exon
so has part: feature:504750-504892:1:exon
so has part: feature:505362-505509:1:exon
so has part: feature:505598-505720:1:exon
so has part: feature:506241-506426:1:exon
so has part: feature:506989-507759:1:exon

position:489966:1
position: 489966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:489966-490061:1:exon

position:490061:1
position: 490061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:491716-491785:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492807-492990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496476-496615:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:496996-497167:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498260-498360:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498774-498890:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499472-499631:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500452-500587:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:501164-501248:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:501850-502006:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:503084-503208:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504431-504535:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:504750-504892:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505362-505509:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:505598-505720:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506241-506426:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:506989-507759:1:exon

IREB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: IREB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: iron-responsive element-binding protein 2 isoform X2
translation: MEFGRNRERLQFFKWSSKVFENISIIPPETGMAHQVNLEYLSRVVFDVKDLLHPDSVVGTDSHMTMVNGLGILGWGVGGIEAEAVMLGMPLSLPLPHVVGCELTGTASPLATSIDIVLSITKHLRQVDVAGKFVEFFGSGVSQLSIADRTTIANMCPEYGAILSFFPVDNVTLEHLKHAGFDKAKLEVTEAYLKAVKLFRSDESSSREPEYSQVVQVSLGSIIPYVSGPKRSQDRVAVNNMKSDFQACLNEKSGVKGFQIAAEKQNDTVPVEYEGNEYKLSHGCVVIAAVISCTNNCNPSVMLAAGLLAKKAVEAGLAVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFEVVGYGCSTCVGNTAPLPEAIRNAIKQGEIIACGVLSGTKNFEGRLCDCVRANYLASPPLVVAYAIAGTVRIDFDSEPLGTGFDGKSIYLRDIWPTRQELHTVEEECVISSMFRELKEKMEKGNKRWNLLEAPESTLFPWDLKSTYIRCPSFFDKLAKEAAPPAAVENAHVLLFLGDSVTTDHISPAGSIARSSAAAKYLSSRGLTPREFNSYGARRGNDAVMTRGTFANIKLLNKFIGKPAPKTVHFPSGQTLDVFEAAELYQKEGIPVIILAGKKYGLGSSRDWAAKGPFLLGVKAVLAESYEKVHRSQLIGIGIAPLQFRPGENPTTLGLTGREQFSIMFPPDLSPRMTLDVKTSTGKVFSVIALFENSMEITLYKNGGSLNFVARRFL
SIO_010081: IREB2
subclass of: SO_0000673
so part of: IREB2
location: join(491744..491785,492807..492990,496476..496615,496996..497167,498260..498360,498774..498890,499472..499631,500452..500587,501164..501248,501850..502006,503084..503208,504431..504535,504750..504892,505362..505509,505598..505720,506241..506426,506989..507099)
location: region:491744-507099:1
so has part: feature:491744-491785:1:exon
so has part: feature:492807-492990:1:exon
so has part: feature:496476-496615:1:exon
so has part: feature:496996-497167:1:exon
so has part: feature:498260-498360:1:exon
so has part: feature:498774-498890:1:exon
so has part: feature:499472-499631:1:exon
so has part: feature:500452-500587:1:exon
so has part: feature:501164-501248:1:exon
so has part: feature:501850-502006:1:exon
so has part: feature:503084-503208:1:exon
so has part: feature:504431-504535:1:exon
so has part: feature:504750-504892:1:exon
so has part: feature:505362-505509:1:exon
so has part: feature:505598-505720:1:exon
so has part: feature:506241-506426:1:exon
so has part: feature:506989-507099:1:exon

XP_016156374.1
type: Protein
SIO_000068: ncbiprotein

position:491744:1
position: 491744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491744-491785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492807-492990:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496476-496615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:496996-497167:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498260-498360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498774-498890:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499472-499631:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500452-500587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:501164-501248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:501850-502006:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503084-503208:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504431-504535:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504750-504892:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505362-505509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:505598-505720:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506241-506426:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:506989-507099:1:exon

HYKK
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HYKK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 512511..517437
location: region:512511-517437:1
so has part: feature:512511-517437:1:exon
subclass of: SO_0000010

101812642
type: Gene
SIO_000068: ncbigene

position:512511:1
position: 512511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517437:1
position: 517437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512511-517437:1:exon

HYKK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HYKK
product: hydroxylysine kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_005051519.2
SIO_010081: HYKK
subclass of: SO_0000673
so part of: HYKK
location: join(512511..512586,512695..512774,513076..513413,514151..514293,516161..516344,516894..517437)
location: region:512511-517437:1
so has part: feature:512511-512586:1:exon
so has part: feature:512695-512774:1:exon
so has part: feature:513076-513413:1:exon
so has part: feature:514151-514293:1:exon
so has part: feature:516161-516344:1:exon
so has part: feature:516894-517437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512511-512586:1:exon

position:512586:1
position: 512586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:512695-512774:1:exon

position:512695:1
position: 512695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512774:1
position: 512774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513076-513413:1:exon

position:513076:1
position: 513076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513413:1
position: 513413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:514151-514293:1:exon

position:514151:1
position: 514151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514293:1
position: 514293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:516161-516344:1:exon

position:516161:1
position: 516161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516344:1
position: 516344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:516894-517437:1:exon

position:516894:1
position: 516894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HYKK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HYKK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydroxylysine kinase
translation: MSSGNDCQPQLLTKPTLGEREAAELVDRVFGLKVSWIGSLPSYDDQNFHVRVSAAGAEEYVLKITNSEDSQEPDLIEAQTRAMMFLSAEGFPSATPYLTKDGHIMSLESGDTRPGSKKYMVRLLSYLPGTPVAKITTNAQILYEIGRLAASMDKVLSEKFQHPSVKSLHRGRFIWNLANVPLLDQYIYALGQNKHRAVVEQVIEQFKGKVIPKLSSFRACINHGDLNDHNILVDSSCASLENPQYRVSGILDFSDMSYGYYVFEVAIAIMYMMIESPEPLGVGGHVLAGFESVLPLTAEERGALFLLVSGRFAQSLVIAAHTALLYPENKEYLTITAKAGWKHLMTMFEMGQEAVERTWFETAQAYTQHSPVLSVQGC
SIO_010081: HYKK
subclass of: SO_0000673
so part of: HYKK
location: join(513083..513413,514151..514293,516161..516344,516894..517372)
location: region:513083-517372:1
so has part: feature:513083-513413:1:exon
so has part: feature:514151-514293:1:exon
so has part: feature:516161-516344:1:exon
so has part: feature:516894-517372:1:exon

XP_005051576.1
type: Protein
SIO_000068: ncbiprotein

position:513083:1
position: 513083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517372:1
position: 517372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513083-513413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514151-514293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516161-516344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:516894-517372:1:exon

PSMA4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PSMA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 518666..526783
location: region:518666-526783:1
so has part: feature:518666-526783:1:exon
subclass of: SO_0000010

101812840
type: Gene
SIO_000068: ncbigene

position:518666:1
position: 518666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526783:1
position: 526783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518666-526783:1:exon

PSMA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PSMA4
product: proteasome subunit alpha 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005051520.1
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(518666..518891,519075..519117,519810..519972,521265..521342,521571..521659,522519..522649,522861..522984,523367..526783)
location: region:518666-526783:1
so has part: feature:518666-518891:1:exon
so has part: feature:519075-519117:1:exon
so has part: feature:519810-519972:1:exon
so has part: feature:521265-521342:1:exon
so has part: feature:521571-521659:1:exon
so has part: feature:522519-522649:1:exon
so has part: feature:522861-522984:1:exon
so has part: feature:523367-526783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518666-518891:1:exon

position:518891:1
position: 518891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519075-519117:1:exon

position:519075:1
position: 519075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519117:1
position: 519117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:519810-519972:1:exon

position:519810:1
position: 519810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519972:1
position: 519972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:521265-521342:1:exon

position:521265:1
position: 521265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521342:1
position: 521342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:521571-521659:1:exon

position:521571:1
position: 521571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521659:1
position: 521659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:522519-522649:1:exon

position:522519:1
position: 522519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522649:1
position: 522649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:522861-522984:1:exon

position:522861:1
position: 522861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522984:1
position: 522984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:523367-526783:1:exon

position:523367:1
position: 523367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PSMA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit alpha type-4
translation: MSRRYDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGEMTLKTALALAIKVLNKTMDVSKLSAEKVEIATLTRENGKTVIRVLKQKEVEQLIKQHEEEEAKAEREKKEKEQKEKDK
SIO_010081: PSMA4
subclass of: SO_0000673
so part of: PSMA4
location: join(518889..518891,519075..519117,519810..519972,521265..521342,521571..521659,522519..522649,522861..522984,523367..523521)
location: region:518889-523521:1
so has part: feature:518889-518891:1:exon
so has part: feature:519075-519117:1:exon
so has part: feature:519810-519972:1:exon
so has part: feature:521265-521342:1:exon
so has part: feature:521571-521659:1:exon
so has part: feature:522519-522649:1:exon
so has part: feature:522861-522984:1:exon
so has part: feature:523367-523521:1:exon

XP_005051577.1
type: Protein
SIO_000068: ncbiprotein

position:518889:1
position: 518889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523521:1
position: 523521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518889-518891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519075-519117:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519810-519972:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:521265-521342:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:521571-521659:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522519-522649:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522861-522984:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:523367-523521:1:exon

CHRNA5
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CHRNA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 533052..545922
location: region:533052-545922:1
so has part: feature:533052-545922:1:exon
subclass of: SO_0000010

101821609
type: Gene
SIO_000068: ncbigene

position:533052:1
position: 533052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545922:1
position: 545922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533052-545922:1:exon

CHRNA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHRNA5
product: cholinergic receptor nicotinic alpha 5 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051567.2
SIO_010081: CHRNA5
subclass of: SO_0000673
so part of: CHRNA5
location: join(533052..533088,539858..540009,540291..540335,541577..541686,542628..543459,545403..545922)
location: region:533052-545922:1
so has part: feature:533052-533088:1:exon
so has part: feature:539858-540009:1:exon
so has part: feature:540291-540335:1:exon
so has part: feature:541577-541686:1:exon
so has part: feature:542628-543459:1:exon
so has part: feature:545403-545922:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:533052-533088:1:exon

position:533088:1
position: 533088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539858-540009:1:exon

position:539858:1
position: 539858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540009:1
position: 540009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:540291-540335:1:exon

position:540291:1
position: 540291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540335:1
position: 540335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:541577-541686:1:exon

position:541577:1
position: 541577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541686:1
position: 541686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542628-543459:1:exon

position:542628:1
position: 542628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543459:1
position: 543459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:545403-545922:1:exon

position:545403:1
position: 545403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHRNA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHRNA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-5
translation: MALSGQNAPEAEAVSEPSFIAKSEDRLFKHLFEDYQRWVRPVERLNDTIKIKFGLAISQLVDVDEKNQLMTTNVWLKQEWIDVKLRWNPEDYAGITSIRVPSDSIWIPDIVLYDNADGRFEGTSTKTVVKYDGTIAWTPPANYKSSCTIDVTFFPFDLQNCSMKFGSWTYDGSQVDLILEDYDVDKRDFFDNGEWEIVTATGSKGNRTDGCCWYPFVTYSFIIRRLPLFYTLFLIIPCIGLSFLTVLVFYLPSNEGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMRSHVDRYFAQKEETANMNGSESSRNTLEAALDSIRYITRHVMKENEVREVVEDWKYIAQVLDRMFLWAFLLVSIIGSLVLFIPVIHKWASIIVPTHIGSTNA
SIO_010081: CHRNA5
subclass of: SO_0000673
so part of: CHRNA5
location: join(533052..533088,539858..540009,540291..540335,541577..541686,542628..543459,545403..545564)
location: region:533052-545564:1
so has part: feature:533052-533088:1:exon
so has part: feature:539858-540009:1:exon
so has part: feature:540291-540335:1:exon
so has part: feature:541577-541686:1:exon
so has part: feature:542628-543459:1:exon
so has part: feature:545403-545564:1:exon

XP_005051624.1
type: Protein
SIO_000068: ncbiprotein

position:545564:1
position: 545564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533052-533088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539858-540009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:540291-540335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:541577-541686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542628-543459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545403-545564:1:exon

CHRNA3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CHRNA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(547984..561849)
location: region:547984-561849:-1
so has part: feature:547984-561849:-1:exon
subclass of: SO_0000010

101813046
type: Gene
SIO_000068: ncbigene

position:547984:-1
position: 547984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561849:-1
position: 561849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547984-561849:-1:exon

CHRNA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHRNA3
product: cholinergic receptor nicotinic alpha 3 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_005051521.1
SIO_010081: CHRNA3
subclass of: SO_0000673
so part of: CHRNA3
location: complement(join(547984..549084,550495..551506,552610..552719,555294..555338,555406..555545,559894..561849))
location: region:547984-561849:-1
so has part: feature:559894-561849:-1:exon
so has part: feature:555406-555545:-1:exon
so has part: feature:555294-555338:-1:exon
so has part: feature:552610-552719:-1:exon
so has part: feature:550495-551506:-1:exon
so has part: feature:547984-549084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559894-561849:-1:exon

position:559894:-1
position: 559894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555406-555545:-1:exon

position:555406:-1
position: 555406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555545:-1
position: 555545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555294-555338:-1:exon

position:555294:-1
position: 555294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555338:-1
position: 555338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:552610-552719:-1:exon

position:552610:-1
position: 552610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552719:-1
position: 552719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:550495-551506:-1:exon

position:550495:-1
position: 550495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551506:-1
position: 551506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:547984-549084:-1:exon

position:549084:-1
position: 549084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHRNA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-3
translation: MQNLSTLLLTAAVCLLWQGCGGSEAEHRLYSALFESYNQFVRPVKNVSDPVIVQFEVSMSQLVKVDEVNQIMETNLWLKHIWNDYKLRWNPADYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDDKTKALLKYTGDVTWIPPAIFKSSCKIDVTYFPFDNQNCTMKFGSWSYDKAKIDLVLIGSTMNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINMIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRPASDEENNQKPKPLFTSEFSNLNCINGSETKCCKDGFVCQDMACSCCQCQRTKFSDFSGNLTRSSSSESVDPMLSFSVLSPEMRDAIESVKYIAENMKMQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPLMAGDEM
SIO_010081: CHRNA3
subclass of: SO_0000673
so part of: CHRNA3
location: complement(join(548956..549084,550495..551506,552610..552719,555294..555338,555406..555545,559894..559948))
location: region:548956-559948:-1
so has part: feature:559894-559948:-1:exon
so has part: feature:555406-555545:-1:exon
so has part: feature:555294-555338:-1:exon
so has part: feature:552610-552719:-1:exon
so has part: feature:550495-551506:-1:exon
so has part: feature:548956-549084:-1:exon

XP_005051578.1
type: Protein
SIO_000068: ncbiprotein

position:548956:-1
position: 548956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559948:-1
position: 559948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559894-559948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:555406-555545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555294-555338:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552610-552719:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550495-551506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:548956-549084:-1:exon

CHRNB4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CHRNB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(567664..581208)
location: region:567664-581208:-1
so has part: feature:567664-581208:-1:exon
subclass of: SO_0000010

101813243
type: Gene
SIO_000068: ncbigene

position:567664:-1
position: 567664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581208:-1
position: 581208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567664-581208:-1:exon

CHRNB4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CHRNB4
product: cholinergic receptor nicotinic beta 4 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051522.1
SIO_010081: CHRNB4
subclass of: SO_0000673
so part of: CHRNB4
location: complement(join(567664..567935,570476..571448,574055..574164,574287..574331,576091..576236,581138..581208))
location: region:567664-581208:-1
so has part: feature:581138-581208:-1:exon
so has part: feature:576091-576236:-1:exon
so has part: feature:574287-574331:-1:exon
so has part: feature:574055-574164:-1:exon
so has part: feature:570476-571448:-1:exon
so has part: feature:567664-567935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581138-581208:-1:exon

position:581138:-1
position: 581138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576091-576236:-1:exon

position:576091:-1
position: 576091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576236:-1
position: 576236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:574287-574331:-1:exon

position:574287:-1
position: 574287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574331:-1
position: 574331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:574055-574164:-1:exon

position:574055:-1
position: 574055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574164:-1
position: 574164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:570476-571448:-1:exon

position:570476:-1
position: 570476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571448:-1
position: 571448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:567664-567935:-1:exon

position:567935:-1
position: 567935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNB4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CHRNB4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit beta-4
translation: MRKMYTLVLFVVGSFCLNGSMAADAEEKLMNHLLSPDRYNKLIRPAVNSSQLVSIELQVSLAQLISVNEREQIMTTNVWLNQEWIDYRLAWKPSDYEGINKLRIPAKHIWLPDIVLYNNADGTYEVSLYTNAIVKNNGSILWLPPAIYKSACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDMVLKTSMASMDDFTPSGEWDIVALPGRRTVNPLDPTYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLIGKYLMFTMVLVTFSIVTSVCVLNVHHRSPSTHTMPPWVKLVFLERLPAYLFMKRPENHSPRQKPCNCKKTKAENPCMEPSDFYKNSTYFLNTASAKRYEMKASETLDNVSSHRDFRLRTGTKFSPEVQEAIDGVSFIAEHMKSDDNDQSVIEDWKYVAMVVDRLFLWIFVLVCVLGTVGLFLQPLFQNHTAAINP
SIO_010081: CHRNB4
subclass of: SO_0000673
so part of: CHRNB4
location: complement(join(567795..567935,570476..571448,574055..574164,574287..574331,576091..576236,581138..581192))
location: region:567795-581192:-1
so has part: feature:581138-581192:-1:exon
so has part: feature:576091-576236:-1:exon
so has part: feature:574287-574331:-1:exon
so has part: feature:574055-574164:-1:exon
so has part: feature:570476-571448:-1:exon
so has part: feature:567795-567935:-1:exon

XP_005051579.1
type: Protein
SIO_000068: ncbiprotein

position:567795:-1
position: 567795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581192:-1
position: 581192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581138-581192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576091-576236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574287-574331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574055-574164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:570476-571448:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567795-567935:-1:exon

UBE2Q2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: UBE2Q2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 649123..692934
location: region:649123-692934:1
so has part: feature:649123-692934:1:exon
subclass of: SO_0000010

101813433
type: Gene
SIO_000068: ncbigene

position:649123:1
position: 649123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692934:1
position: 692934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649123-692934:1:exon

UBE2Q2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: UBE2Q2
product: ubiquitin conjugating enzyme E2 Q2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300876.1
SIO_010081: UBE2Q2
subclass of: SO_0000673
so part of: UBE2Q2
location: join(649123..649350,651086..651097,663660..663670,664322..664426,670994..671098,672696..672752,674563..674703,680997..681081,685359..685419,687845..687935,688249..688307,689560..689608,690573..690668,691100..691166,692732..692934)
location: region:649123-692934:1
so has part: feature:649123-649350:1:exon
so has part: feature:651086-651097:1:exon
so has part: feature:663660-663670:1:exon
so has part: feature:664322-664426:1:exon
so has part: feature:670994-671098:1:exon
so has part: feature:672696-672752:1:exon
so has part: feature:674563-674703:1:exon
so has part: feature:680997-681081:1:exon
so has part: feature:685359-685419:1:exon
so has part: feature:687845-687935:1:exon
so has part: feature:688249-688307:1:exon
so has part: feature:689560-689608:1:exon
so has part: feature:690573-690668:1:exon
so has part: feature:691100-691166:1:exon
so has part: feature:692732-692934:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:649123-649350:1:exon

position:649350:1
position: 649350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651086-651097:1:exon

position:651086:1
position: 651086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651097:1
position: 651097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:663660-663670:1:exon

position:663660:1
position: 663660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663670:1
position: 663670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:664322-664426:1:exon

position:664322:1
position: 664322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664426:1
position: 664426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:670994-671098:1:exon

position:670994:1
position: 670994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671098:1
position: 671098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:672696-672752:1:exon

position:672696:1
position: 672696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672752:1
position: 672752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:674563-674703:1:exon

position:674563:1
position: 674563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674703:1
position: 674703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:680997-681081:1:exon

position:680997:1
position: 680997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681081:1
position: 681081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:685359-685419:1:exon

position:685359:1
position: 685359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685419:1
position: 685419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:687845-687935:1:exon

position:687845:1
position: 687845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687935:1
position: 687935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:688249-688307:1:exon

position:688249:1
position: 688249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688307:1
position: 688307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:689560-689608:1:exon

position:689560:1
position: 689560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689608:1
position: 689608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:690573-690668:1:exon

position:690573:1
position: 690573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:690668:1
position: 690668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:691100-691166:1:exon

position:691100:1
position: 691100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691166:1
position: 691166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:692732-692934:1:exon

position:692732:1
position: 692732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2Q2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: UBE2Q2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 Q2
translation: MSVSGLKAELKFLESIFDKDHERFRIVSWKLDELHCQFVLLPPPPGSGPQPPPPQTVHCTLTESYPSSSPIWFVESDDPNLTSVLERLEDIKKSNTLLLQQLKRLICDLCRLYNLPQHPDVEMLDQPLPAGQNGTTEEVTSEEEEEEDMGEDIEDLDHYDMKEEEPVDGKKSEDEGIEKENLAILEKIRKNQRQDHLNGAVSGSVQASDRLMKELRDIYRSQSYKTGIYSVELVNDSLYEWHVKLLKVDPDSPLHSDLQVLKEKEGVEYILLNFSFKDNFPFDPPFVRVVSPVLTGGYVLGGGALCMELLTKQGWSSAYSIESVIMQINATLVKGKARVQFGANKNQYNLARAQQSYKSLVQIHEKNGWYTPPKEDG
SIO_010081: UBE2Q2
subclass of: SO_0000673
so part of: UBE2Q2
location: join(649188..649350,651086..651097,663660..663670,664322..664426,670994..671098,672696..672752,674563..674703,680997..681081,685359..685419,687845..687935,688249..688307,689560..689608,690573..690668,691100..691166,692732..692763)
location: region:649188-692763:1
so has part: feature:649188-649350:1:exon
so has part: feature:651086-651097:1:exon
so has part: feature:663660-663670:1:exon
so has part: feature:664322-664426:1:exon
so has part: feature:670994-671098:1:exon
so has part: feature:672696-672752:1:exon
so has part: feature:674563-674703:1:exon
so has part: feature:680997-681081:1:exon
so has part: feature:685359-685419:1:exon
so has part: feature:687845-687935:1:exon
so has part: feature:688249-688307:1:exon
so has part: feature:689560-689608:1:exon
so has part: feature:690573-690668:1:exon
so has part: feature:691100-691166:1:exon
so has part: feature:692732-692763:1:exon

XP_016156362.1
type: Protein
SIO_000068: ncbiprotein

position:649188:1
position: 649188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692763:1
position: 692763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:649188-649350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651086-651097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663660-663670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664322-664426:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670994-671098:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672696-672752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:674563-674703:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680997-681081:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:685359-685419:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:687845-687935:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:688249-688307:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:689560-689608:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:690573-690668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:691100-691166:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:692732-692763:1:exon

FBXO22
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FBXO22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 694794..703448
location: region:694794-703448:1
so has part: feature:694794-703448:1:exon
subclass of: SO_0000010

101813635
type: Gene
SIO_000068: ncbigene

position:694794:1
position: 694794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703448:1
position: 703448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694794-703448:1:exon

FBXO22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FBXO22
product: F-box protein 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_016300944.1
SIO_010081: FBXO22
subclass of: SO_0000673
so part of: FBXO22
location: join(694794..694930,695237..695369,696100..696187,696593..696688,697536..697700,698032..698197,699964..703448)
location: region:694794-703448:1
so has part: feature:694794-694930:1:exon
so has part: feature:695237-695369:1:exon
so has part: feature:696100-696187:1:exon
so has part: feature:696593-696688:1:exon
so has part: feature:697536-697700:1:exon
so has part: feature:698032-698197:1:exon
so has part: feature:699964-703448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694794-694930:1:exon

position:694930:1
position: 694930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:695237-695369:1:exon

position:695237:1
position: 695237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695369:1
position: 695369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:696100-696187:1:exon

position:696100:1
position: 696100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696187:1
position: 696187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:696593-696688:1:exon

position:696593:1
position: 696593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696688:1
position: 696688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:697536-697700:1:exon

position:697536:1
position: 697536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697700:1
position: 697700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:698032-698197:1:exon

position:698032:1
position: 698032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698197:1
position: 698197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:699964-703448:1:exon

position:699964:1
position: 699964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FBXO22
product: F-box protein 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016300943.1
SIO_010081: FBXO22
subclass of: SO_0000673
so part of: FBXO22
location: join(694794..694930,695237..695369,696100..696187,696593..696688,697536..697700,698032..698197,699961..703447)
location: region:694794-703447:1
so has part: feature:694794-694930:1:exon
so has part: feature:695237-695369:1:exon
so has part: feature:696100-696187:1:exon
so has part: feature:696593-696688:1:exon
so has part: feature:697536-697700:1:exon
so has part: feature:698032-698197:1:exon
so has part: feature:699961-703447:1:exon

position:703447:1
position: 703447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694794-694930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695237-695369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:696100-696187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696593-696688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:697536-697700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698032-698197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:699961-703447:1:exon

position:699961:1
position: 699961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXO22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FBXO22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 22 isoform X1
translation: MESAAKGGYVLANLAEVVERVLGFLPTKALLRAACVCRLWRECARRTLRTRQRIAWVSALEPGPAENHALVRALARELEKVHVLPQTVLYIADTETFSGHEECHEQKKARKRNSKETALALEKLLPKRCQVLGLVTPGIVVTPMGSSSNQPQEIEEGEAGFALLFPKIDGVKIHTFHFSKDVKNRVFDESKFAEAGLKNNPDLRVVLLFGYNSWKTGATRFLHQIVNPLNEKSIILAGGQVESFTSLTSENSQAQPGDACGVVGLAFSGAQIQSATVLLDQDVADERTAEAAMQRLKAANIPEHNTIGFMFACVGRGYRHYKTKRNMEADAFRKFFPNVPLFGFFGHGEIGCDRIVTGNFVLRECNDIKDDLLHGYTTVMTLIHLGSTKANQA
SIO_010081: FBXO22
subclass of: SO_0000673
so part of: FBXO22
location: join(694827..694930,695237..695369,696100..696187,696593..696688,697536..697700,698032..698197,699961..700390)
location: region:694827-700390:1
so has part: feature:694827-694930:1:exon
so has part: feature:695237-695369:1:exon
so has part: feature:696100-696187:1:exon
so has part: feature:696593-696688:1:exon
so has part: feature:697536-697700:1:exon
so has part: feature:698032-698197:1:exon
so has part: feature:699961-700390:1:exon

XP_016156429.1
type: Protein
SIO_000068: ncbiprotein

position:694827:1
position: 694827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700390:1
position: 700390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694827-694930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695237-695369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:696100-696187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696593-696688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:697536-697700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698032-698197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:699961-700390:1:exon

FBXO22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FBXO22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 22 isoform X2
translation: MESAAKGGYVLANLAEVVERVLGFLPTKALLRAACVCRLWRECARRTLRTRQRIAWVSALEPGPAENHALVRALARELEKVHVLPQTVLYIADTETFSGHEECHEQKKARKRNSKETALALEKLLPKRCQVLGLVTPGIVVTPMGSSSNQPQEIEEGEAGFALLFPKIDGVKIHTFHFSKDVKNRVFDESKFAEAGLKNNPDLRVVLLFGYNSWKTGATRFLHQIVNPLNEKSIILAGGQVESFTSLTSENQAQPGDACGVVGLAFSGAQIQSATVLLDQDVADERTAEAAMQRLKAANIPEHNTIGFMFACVGRGYRHYKTKRNMEADAFRKFFPNVPLFGFFGHGEIGCDRIVTGNFVLRECNDIKDDLLHGYTTVMTLIHLGSTKANQA
SIO_010081: FBXO22
subclass of: SO_0000673
so part of: FBXO22
location: join(694827..694930,695237..695369,696100..696187,696593..696688,697536..697700,698032..698197,699964..700390)
location: region:694827-700390:1
so has part: feature:694827-694930:1:exon
so has part: feature:695237-695369:1:exon
so has part: feature:696100-696187:1:exon
so has part: feature:696593-696688:1:exon
so has part: feature:697536-697700:1:exon
so has part: feature:698032-698197:1:exon
so has part: feature:699964-700390:1:exon

XP_016156430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694827-694930:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:695237-695369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:696100-696187:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:696593-696688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:697536-697700:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698032-698197:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:699964-700390:1:exon

NRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(708979..758901)
location: region:708979-758901:-1
so has part: feature:708979-758901:-1:exon
subclass of: SO_0000010

101814037
type: Gene
SIO_000068: ncbigene

position:708979:-1
position: 708979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758901:-1
position: 758901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708979-758901:-1:exon

NRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NRG4
product: neuregulin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_016300861.1
SIO_010081: NRG4
subclass of: SO_0000673
so part of: NRG4
location: complement(join(708979..709178,709275..709354,713010..713159,720043..720136,724203..724257,725239..725411,758724..758901))
location: region:708979-758901:-1
so has part: feature:758724-758901:-1:exon
so has part: feature:725239-725411:-1:exon
so has part: feature:724203-724257:-1:exon
so has part: feature:720043-720136:-1:exon
so has part: feature:713010-713159:-1:exon
so has part: feature:709275-709354:-1:exon
so has part: feature:708979-709178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:758724-758901:-1:exon

position:758724:-1
position: 758724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725239-725411:-1:exon

position:725239:-1
position: 725239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725411:-1
position: 725411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:724203-724257:-1:exon

position:724203:-1
position: 724203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724257:-1
position: 724257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:720043-720136:-1:exon

position:720043:-1
position: 720043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720136:-1
position: 720136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:713010-713159:-1:exon

position:713010:-1
position: 713010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713159:-1
position: 713159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:709275-709354:-1:exon

position:709275:-1
position: 709275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709354:-1
position: 709354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:708979-709178:-1:exon

position:709178:-1
position: 709178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NRG4
product: neuregulin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005051530.2
SIO_010081: NRG4
subclass of: SO_0000673
so part of: NRG4
location: complement(join(708979..709178,709275..709354,713010..713159,720043..720136,724203..724257,725239..725411,729085..729244))
location: region:708979-729244:-1
so has part: feature:729085-729244:-1:exon
so has part: feature:725239-725411:-1:exon
so has part: feature:724203-724257:-1:exon
so has part: feature:720043-720136:-1:exon
so has part: feature:713010-713159:-1:exon
so has part: feature:709275-709354:-1:exon
so has part: feature:708979-709178:-1:exon

position:729244:-1
position: 729244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:729085-729244:-1:exon

position:729085:-1
position: 729085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725239-725411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:724203-724257:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:720043-720136:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:713010-713159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:709275-709354:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:708979-709178:-1:exon

NRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NRG4
product: neuregulin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_016300860.1
SIO_010081: NRG4
subclass of: SO_0000673
so part of: NRG4
location: complement(join(708979..709178,709275..709354,713010..713159,720043..720136,724203..724257,725239..725411,727710..727783,729085..729244))
location: region:708979-729244:-1
so has part: feature:729085-729244:-1:exon
so has part: feature:727710-727783:-1:exon
so has part: feature:725239-725411:-1:exon
so has part: feature:724203-724257:-1:exon
so has part: feature:720043-720136:-1:exon
so has part: feature:713010-713159:-1:exon
so has part: feature:709275-709354:-1:exon
so has part: feature:708979-709178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729085-729244:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727710-727783:-1:exon

position:727710:-1
position: 727710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727783:-1
position: 727783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725239-725411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:724203-724257:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:720043-720136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:713010-713159:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:709275-709354:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:708979-709178:-1:exon

NRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-neuregulin-4, membrane-bound isoform
translation: MRTDHEELCGTSYGSFCLNGGICYMIPTVSSPFCRCIESYTGARCEEVLLPSIKSQTKGDLFAAFLASLLLLGVLVIGAFYFLCRKVSIPRTSSSECGANLVETTSSNGCNKITTA
SIO_010081: NRG4
subclass of: SO_0000673
so part of: NRG4
location: complement(join(709162..709178,709275..709354,713010..713159,720043..720136,724203..724212))
location: region:709162-724212:-1
so has part: feature:724203-724212:-1:exon
so has part: feature:720043-720136:-1:exon
so has part: feature:713010-713159:-1:exon
so has part: feature:709275-709354:-1:exon
so has part: feature:709162-709178:-1:exon

XP_016156346.1
type: Protein
SIO_000068: ncbiprotein

position:709162:-1
position: 709162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724212:-1
position: 724212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724203-724212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720043-720136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713010-713159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:709275-709354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709162-709178:-1:exon

NRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-neuregulin-4, membrane-bound isoform
translation: MRTDHEELCGTSYGSFCLNGGICYMIPTVSSPFCRCIESYTGARCEEVLLPSIKSQTKGDLFAAFLASLLLLGVLVIGAFYFLCRKVSIPRTSSSECGANLVETTSSNGCNKITTA
SIO_010081: NRG4
subclass of: SO_0000673
so part of: NRG4
location: complement(join(709162..709178,709275..709354,713010..713159,720043..720136,724203..724212))
location: region:709162-724212:-1
so has part: feature:724203-724212:-1:exon
so has part: feature:720043-720136:-1:exon
so has part: feature:713010-713159:-1:exon
so has part: feature:709275-709354:-1:exon
so has part: feature:709162-709178:-1:exon

XP_016156347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:724203-724212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720043-720136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713010-713159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:709275-709354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709162-709178:-1:exon

NRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-neuregulin-4, membrane-bound isoform
translation: MRTDHEELCGTSYGSFCLNGGICYMIPTVSSPFCRCIESYTGARCEEVLLPSIKSQTKGDLFAAFLASLLLLGVLVIGAFYFLCRKVSIPRTSSSECGANLVETTSSNGCNKITTA
SIO_010081: NRG4
subclass of: SO_0000673
so part of: NRG4
location: complement(join(709162..709178,709275..709354,713010..713159,720043..720136,724203..724212))
location: region:709162-724212:-1
so has part: feature:724203-724212:-1:exon
so has part: feature:720043-720136:-1:exon
so has part: feature:713010-713159:-1:exon
so has part: feature:709275-709354:-1:exon
so has part: feature:709162-709178:-1:exon

XP_005051587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:724203-724212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720043-720136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713010-713159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:709275-709354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709162-709178:-1:exon

TMEM266
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TMEM266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 749769..821749
location: region:749769-821749:1
so has part: feature:749769-821749:1:exon
subclass of: SO_0000010

101813833
type: Gene
SIO_000068: ncbigene

position:749769:1
position: 749769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821749:1
position: 821749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749769-821749:1:exon

TMEM266
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TMEM266
product: transmembrane protein 266
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300858.1
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(749769..749879,758284..758456,758746..758823,760036..760136,761131..761236,763278..763466,774517..774671,778795..778868,785460..785516,787252..787390,788858..788973,799809..799995,811145..811195,820369..820659,820951..821749)
location: region:749769-821749:1
so has part: feature:749769-749879:1:exon
so has part: feature:758284-758456:1:exon
so has part: feature:758746-758823:1:exon
so has part: feature:760036-760136:1:exon
so has part: feature:761131-761236:1:exon
so has part: feature:763278-763466:1:exon
so has part: feature:774517-774671:1:exon
so has part: feature:778795-778868:1:exon
so has part: feature:785460-785516:1:exon
so has part: feature:787252-787390:1:exon
so has part: feature:788858-788973:1:exon
so has part: feature:799809-799995:1:exon
so has part: feature:811145-811195:1:exon
so has part: feature:820369-820659:1:exon
so has part: feature:820951-821749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749769-749879:1:exon

position:749879:1
position: 749879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758284-758456:1:exon

position:758284:1
position: 758284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758456:1
position: 758456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:758746-758823:1:exon

position:758746:1
position: 758746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758823:1
position: 758823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:760036-760136:1:exon

position:760036:1
position: 760036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760136:1
position: 760136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:761131-761236:1:exon

position:761131:1
position: 761131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761236:1
position: 761236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:763278-763466:1:exon

position:763278:1
position: 763278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763466:1
position: 763466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:774517-774671:1:exon

position:774517:1
position: 774517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774671:1
position: 774671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:778795-778868:1:exon

position:778795:1
position: 778795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778868:1
position: 778868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:785460-785516:1:exon

position:785460:1
position: 785460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785516:1
position: 785516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:787252-787390:1:exon

position:787252:1
position: 787252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787390:1
position: 787390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:788858-788973:1:exon

position:788858:1
position: 788858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788973:1
position: 788973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:799809-799995:1:exon

position:799809:1
position: 799809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799995:1
position: 799995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:811145-811195:1:exon

position:811145:1
position: 811145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811195:1
position: 811195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:820369-820659:1:exon

position:820369:1
position: 820369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820659:1
position: 820659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:820951-821749:1:exon

position:820951:1
position: 820951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM266
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TMEM266
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 266
translation: MTNPQPTIEGGVSEVEIISQQVEEETKSIAPVQLVNFAYRDLPLAALDLSVAGSQLLSNLDEEYQREGSNWLKPCCGRRAAVWQVFLLSASLNSFLVACVVLVVILLTLELLIDIKLLQFSSASQFAGVIHWISLVILSVFFSETILRIVVLGIWDYIENKIEVFDGAVIILSLAPMVASTVANGPSSPWDAISLIITLRIWRVKRIIDAYVLPVKVEMEMMIQQYEKAKVIQDEQLERLTQICQEQGFEIRQLRAHLAQQDLDLAAEREAALQVPHVLNKQSSKRYKVVATEDSDDEATESITELRPAREDDMNNYISRYYNEPSSDSGVPEAALCAVTTAAIDVHRPNVPSELFAVEVPLRLGSTGTSASLTSGSASRSSGSSGPRGCSESSQTLGSSPDCSAACEEPAAAGPGRPGVPHSVVQELLSSLSEEACLAQKGLDPVNLKLPSPAGSLGASPDLGHRLSVYNRRNQESLDVFQLKPLLDCPQGAPTIEDKFGALGPPEARLGRVPEA
SIO_010081: TMEM266
subclass of: SO_0000673
so part of: TMEM266
location: join(761223..761236,763278..763466,774517..774671,778795..778868,785460..785516,787252..787390,788858..788973,799809..799995,811145..811195,820369..820659,820951..821228)
location: region:761223-821228:1
so has part: feature:761223-761236:1:exon
so has part: feature:763278-763466:1:exon
so has part: feature:774517-774671:1:exon
so has part: feature:778795-778868:1:exon
so has part: feature:785460-785516:1:exon
so has part: feature:787252-787390:1:exon
so has part: feature:788858-788973:1:exon
so has part: feature:799809-799995:1:exon
so has part: feature:811145-811195:1:exon
so has part: feature:820369-820659:1:exon
so has part: feature:820951-821228:1:exon

XP_016156344.1
type: Protein
SIO_000068: ncbiprotein

position:761223:1
position: 761223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821228:1
position: 821228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:761223-761236:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763278-763466:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:774517-774671:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:778795-778868:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:785460-785516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:787252-787390:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:788858-788973:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799809-799995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:811145-811195:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820369-820659:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:820951-821228:1:exon

ETFA
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ETFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821837..>846737)
location: region:821837-846737:-1
so has part: feature:821837-846737:-1:exon
subclass of: SO_0000010

101821803
type: Gene
SIO_000068: ncbigene

position:821837:-1
position: 821837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846737:-1
position: 846737
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821837-846737:-1:exon

ETFA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ETFA
product: electron transfer flavoprotein alpha subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016300859.1
SIO_010081: ETFA
subclass of: SO_0000673
so part of: ETFA
location: complement(join(821837..821950,822763..822843,826079..826144,837738..837820,838797..838865,839660..839761,840898..841008,842215..842314,844545..844627,844731..844812,846489..>846737))
location: region:821837-846737:-1
so has part: feature:846489-846737:-1:exon
so has part: feature:844731-844812:-1:exon
so has part: feature:844545-844627:-1:exon
so has part: feature:842215-842314:-1:exon
so has part: feature:840898-841008:-1:exon
so has part: feature:839660-839761:-1:exon
so has part: feature:838797-838865:-1:exon
so has part: feature:837738-837820:-1:exon
so has part: feature:826079-826144:-1:exon
so has part: feature:822763-822843:-1:exon
so has part: feature:821837-821950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:846489-846737:-1:exon

position:846489:-1
position: 846489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:844731-844812:-1:exon

position:844731:-1
position: 844731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844812:-1
position: 844812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:844545-844627:-1:exon

position:844545:-1
position: 844545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844627:-1
position: 844627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:842215-842314:-1:exon

position:842215:-1
position: 842215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842314:-1
position: 842314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:840898-841008:-1:exon

position:840898:-1
position: 840898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841008:-1
position: 841008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:839660-839761:-1:exon

position:839660:-1
position: 839660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839761:-1
position: 839761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:838797-838865:-1:exon

position:838797:-1
position: 838797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838865:-1
position: 838865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:837738-837820:-1:exon

position:837738:-1
position: 837738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837820:-1
position: 837820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:826079-826144:-1:exon

position:826079:-1
position: 826079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826144:-1
position: 826144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:822763-822843:-1:exon

position:822763:-1
position: 822763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822843:-1
position: 822843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:821837-821950:-1:exon

position:821950:-1
position: 821950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETFA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ETFA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electron transfer flavoprotein subunit alpha, mitochondrial
translation: GFVQLVDFCEASGVQRSSFCFSARFATAVPPLQASVLRRSQSTLVVAEHNNESLTPITLNAITAAKRLGGEVSCLVAGTSCDKVASELSKVQGVAKVLVAQHDAYKGFLAEELTPLIVETHKKFNYTHICAGASAFGKNLIPRVAGKLDVAPVSDIIEIKSPNTFVRTIYAGNIICTVQCDEAIKVFTVRGTSFEAAPVSGGSASVEKLTPPPPVGISEWIEQKLTKSDRPELTSAKVVVSGGRGLKSGENFKLLYDLADQLHAAVGASRAAVDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGLVADLFQAVPEMTKLLKKK
SIO_010081: ETFA
subclass of: SO_0000673
so part of: ETFA
location: complement(join(821912..821950,822763..822843,826079..826144,837738..837820,838797..838865,839660..839761,840898..841008,842215..842314,844545..844627,844731..844812,846489..>846737))
location: region:821912-846737:-1
so has part: feature:846489-846737:-1:exon
so has part: feature:844731-844812:-1:exon
so has part: feature:844545-844627:-1:exon
so has part: feature:842215-842314:-1:exon
so has part: feature:840898-841008:-1:exon
so has part: feature:839660-839761:-1:exon
so has part: feature:838797-838865:-1:exon
so has part: feature:837738-837820:-1:exon
so has part: feature:826079-826144:-1:exon
so has part: feature:822763-822843:-1:exon
so has part: feature:821912-821950:-1:exon

XP_016156345.1
type: Protein
SIO_000068: ncbiprotein

position:821912:-1
position: 821912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846489-846737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844731-844812:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844545-844627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:842215-842314:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:840898-841008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:839660-839761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:838797-838865:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:837738-837820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:826079-826144:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:822763-822843:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821912-821950:-1:exon

ISL2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ISL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 855944..868656
location: region:855944-868656:1
so has part: feature:855944-868656:1:exon
subclass of: SO_0000010

101821991
type: Gene
SIO_000068: ncbigene

position:855944:1
position: 855944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868656:1
position: 868656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:855944-868656:1:exon

ISL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ISL2
product: ISL LIM homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300756.1
SIO_010081: ISL2
subclass of: SO_0000673
so part of: ISL2
location: join(855944..856101,866441..866723,867577..867801,867888..868058,868206..868656)
location: region:855944-868656:1
so has part: feature:855944-856101:1:exon
so has part: feature:866441-866723:1:exon
so has part: feature:867577-867801:1:exon
so has part: feature:867888-868058:1:exon
so has part: feature:868206-868656:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:855944-856101:1:exon

position:856101:1
position: 856101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:866441-866723:1:exon

position:866441:1
position: 866441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866723:1
position: 866723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867577-867801:1:exon

position:867577:1
position: 867577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867801:1
position: 867801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:867888-868058:1:exon

position:867888:1
position: 867888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868058:1
position: 868058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:868206-868656:1:exon

position:868206:1
position: 868206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ISL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ISL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin gene enhancer protein ISL-2
translation: MCLTKKKKGKVIVYGCGANSSVGEHGPRLRLARGCRSPRPRSPHHEEQRKHKGSVKKKKCISLIAGLRWGSVLALTVPRRLPAGRPGLALCAGCGGRIQDPFLLRVSPDLEWHVACLKCAECGQPLDETCTCFLRDGKAYCKRDYSRTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRVWFQNKRCKDKKKSILMKQLQQQQHSDKTSLQGLTGTPLVAGSPIRHESAVQGSAVEVQTYQPPWKALSEFALQSDLEQPAAFQQLVSFSESGSLGTSSGSDVTSLSSQLPDTPNSMVPSPAET
SIO_010081: ISL2
subclass of: SO_0000673
so part of: ISL2
location: join(855944..856101,866441..866723,867577..867801,867888..868058,868206..868322)
location: region:855944-868322:1
so has part: feature:855944-856101:1:exon
so has part: feature:866441-866723:1:exon
so has part: feature:867577-867801:1:exon
so has part: feature:867888-868058:1:exon
so has part: feature:868206-868322:1:exon

XP_016156242.1
type: Protein
SIO_000068: ncbiprotein

position:868322:1
position: 868322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:855944-856101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:866441-866723:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867577-867801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867888-868058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:868206-868322:1:exon

SCAPER
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SCAPER
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(871423..1010100)
location: region:871423-1010100:-1
so has part: feature:871423-1010100:-1:exon
subclass of: SO_0000010

101814749
type: Gene
SIO_000068: ncbigene

position:871423:-1
position: 871423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010100:-1
position: 1010100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871423-1010100:-1:exon

SCAPER
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SCAPER
product: S-phase cyclin A-associated protein in the ER
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005051531.1
SIO_010081: SCAPER
subclass of: SO_0000673
so part of: SCAPER
location: complement(join(871423..871849,873530..873581,876106..876297,891222..891371,894278..894512,903882..904037,909001..909230,915445..915568,922431..922546,940477..940603,949576..949641,952860..952996,968396..968503,969625..969777,969887..969968,973638..973780,974639..974794,977081..977221,977659..977770,978074..978191,978620..978695,979125..979295,980872..981090,981489..981751,987983..988143,990055..990171,990618..990718,998183..998377,1002230..1002300,1008468..1008585,1010024..1010100))
location: region:871423-1010100:-1
so has part: feature:1010024-1010100:-1:exon
so has part: feature:1008468-1008585:-1:exon
so has part: feature:1002230-1002300:-1:exon
so has part: feature:998183-998377:-1:exon
so has part: feature:990618-990718:-1:exon
so has part: feature:990055-990171:-1:exon
so has part: feature:987983-988143:-1:exon
so has part: feature:981489-981751:-1:exon
so has part: feature:980872-981090:-1:exon
so has part: feature:979125-979295:-1:exon
so has part: feature:978620-978695:-1:exon
so has part: feature:978074-978191:-1:exon
so has part: feature:977659-977770:-1:exon
so has part: feature:977081-977221:-1:exon
so has part: feature:974639-974794:-1:exon
so has part: feature:973638-973780:-1:exon
so has part: feature:969887-969968:-1:exon
so has part: feature:969625-969777:-1:exon
so has part: feature:968396-968503:-1:exon
so has part: feature:952860-952996:-1:exon
so has part: feature:949576-949641:-1:exon
so has part: feature:940477-940603:-1:exon
so has part: feature:922431-922546:-1:exon
so has part: feature:915445-915568:-1:exon
so has part: feature:909001-909230:-1:exon
so has part: feature:903882-904037:-1:exon
so has part: feature:894278-894512:-1:exon
so has part: feature:891222-891371:-1:exon
so has part: feature:876106-876297:-1:exon
so has part: feature:873530-873581:-1:exon
so has part: feature:871423-871849:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1010024-1010100:-1:exon

position:1010024:-1
position: 1010024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1008468-1008585:-1:exon

position:1008468:-1
position: 1008468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008585:-1
position: 1008585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002230-1002300:-1:exon

position:1002230:-1
position: 1002230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002300:-1
position: 1002300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:998183-998377:-1:exon

position:998183:-1
position: 998183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998377:-1
position: 998377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:990618-990718:-1:exon

position:990618:-1
position: 990618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990718:-1
position: 990718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:990055-990171:-1:exon

position:990055:-1
position: 990055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990171:-1
position: 990171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:987983-988143:-1:exon

position:987983:-1
position: 987983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:988143:-1
position: 988143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:981489-981751:-1:exon

position:981489:-1
position: 981489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981751:-1
position: 981751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:980872-981090:-1:exon

position:980872:-1
position: 980872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981090:-1
position: 981090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:979125-979295:-1:exon

position:979125:-1
position: 979125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979295:-1
position: 979295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:978620-978695:-1:exon

position:978620:-1
position: 978620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978695:-1
position: 978695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:978074-978191:-1:exon

position:978074:-1
position: 978074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978191:-1
position: 978191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:977659-977770:-1:exon

position:977659:-1
position: 977659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977770:-1
position: 977770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:977081-977221:-1:exon

position:977081:-1
position: 977081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977221:-1
position: 977221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:974639-974794:-1:exon

position:974639:-1
position: 974639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974794:-1
position: 974794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:973638-973780:-1:exon

position:973638:-1
position: 973638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973780:-1
position: 973780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:969887-969968:-1:exon

position:969887:-1
position: 969887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969968:-1
position: 969968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:969625-969777:-1:exon

position:969625:-1
position: 969625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969777:-1
position: 969777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:968396-968503:-1:exon

position:968396:-1
position: 968396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968503:-1
position: 968503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:952860-952996:-1:exon

position:952860:-1
position: 952860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952996:-1
position: 952996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:949576-949641:-1:exon

position:949576:-1
position: 949576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949641:-1
position: 949641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:940477-940603:-1:exon

position:940477:-1
position: 940477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940603:-1
position: 940603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:922431-922546:-1:exon

position:922431:-1
position: 922431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922546:-1
position: 922546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:915445-915568:-1:exon

position:915445:-1
position: 915445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915568:-1
position: 915568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:909001-909230:-1:exon

position:909001:-1
position: 909001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909230:-1
position: 909230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:903882-904037:-1:exon

position:903882:-1
position: 903882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904037:-1
position: 904037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:894278-894512:-1:exon

position:894278:-1
position: 894278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894512:-1
position: 894512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:891222-891371:-1:exon

position:891222:-1
position: 891222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891371:-1
position: 891371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:876106-876297:-1:exon

position:876106:-1
position: 876106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876297:-1
position: 876297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:873530-873581:-1:exon

position:873530:-1
position: 873530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873581:-1
position: 873581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:871423-871849:-1:exon

position:871849:-1
position: 871849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCAPER
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SCAPER
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: S phase cyclin A-associated protein in the endoplasmic reticulum
translation: MGSSKNVISEPVDAEEGYNMMASFQRSNSHDKVRKIVAEEGRTARNLIAWSVPLENKEDDGKSKWQSGGKTKRVTQGTHKTAKQNTLDCKLSAAGAGDKSFDKSPTKTRQPRKVDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKADAQSRPTSLAWEVKKMSPGRHVIPSPSTDRISVTSNARRSLNFGNPAVTISATRLAPSGVSWADKVKANHGTKAANPELATAQACLVPPAQKSLRKNDRKDAEGWETVQRGRPVRSRCTALAAKAPVAAESLKSRGDSDKENGISPPAENKHGSSALGGAVSESTELVQKDPLHHSEGPLTERTQFTASEANGGTGTALQGDCLEPAPEMPPVLTSTDCSSKSLHMNEASPQSTDTTDWHQTEKAKSETEMDPSDISNSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIEAEENNDINIETDNDSDFSANMGNGSISFCGLSMDWNDVLADYEARESWRQSNSWGDRVEEEPARPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQMKAQQLREKLREEKTLKLQKLMEREKDVRKWKEELLDQRRRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLNKLKEYEQRLNELQEERQRRQEEKQARDEAVQERKRAREAERQARVEELLMKRKEQEARIEQQRQEKEKAREDAARERARDREERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIEQRKEKAAELSSGRHANTDYAPKLTPYERKKQCSLCNVMISSEVYLFSHIKGKKHQQAVRENSSIQGRELSDEEVEHLSLKKYIVDIVIESSVPVEPLKDGEEKQKIKKKAKKLKARMNSRAKEYESLMEAKNAVSDSPFKAKLQRLAKDLVKHLQMQDSCSLGNSKVPGLDRTLGEISRILEKENTADKIAFRAAGGLTALENVLQMVTSPTNLNAAARVPLKSLCSTVNVYSLTCSNCIENCTYVLFSNKITFLMDLLIHQFTVSVPDDHNATAGRSVNKQVFEGLTTGLLKVTTVIFRCLISSFPDGNSHSTALKILQEVKSKSSQVEAFSSRVQDLISYMVNIGLMDKLCCCFLSVQGPVDENPKIASFLQNATALLHGICQLCFAVSGRSWNVFDTARQDPTGLTAALQATDLVGVLHMLYCVLFHGTISDPNTSPKDSYATSTVQVAIQSLRFFNSFAVLDLPAFQSIVGAEGLSLAFRHIISSLLGYCSQHTCEGLLHEVIICVGYFTVNNPDNQIIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNPQNKIILEQEMSCVLLATFIQDFAQSSGQMENQLSQQREKFFSSQDYLELSNRFPRQSWEEARQFFLKK
SIO_010081: SCAPER
subclass of: SO_0000673
so part of: SCAPER
location: complement(join(871755..871849,873530..873581,876106..876297,891222..891371,894278..894512,903882..904037,909001..909230,915445..915568,922431..922546,940477..940603,949576..949641,952860..952996,968396..968503,969625..969777,969887..969968,973638..973780,974639..974794,977081..977221,977659..977770,978074..978191,978620..978695,979125..979295,980872..981090,981489..981751,987983..988143,990055..990171,990618..990718,998183..998377,1002230..1002300,1008468..1008585,1010024..1010086))
location: region:871755-1010086:-1
so has part: feature:1010024-1010086:-1:exon
so has part: feature:1008468-1008585:-1:exon
so has part: feature:1002230-1002300:-1:exon
so has part: feature:998183-998377:-1:exon
so has part: feature:990618-990718:-1:exon
so has part: feature:990055-990171:-1:exon
so has part: feature:987983-988143:-1:exon
so has part: feature:981489-981751:-1:exon
so has part: feature:980872-981090:-1:exon
so has part: feature:979125-979295:-1:exon
so has part: feature:978620-978695:-1:exon
so has part: feature:978074-978191:-1:exon
so has part: feature:977659-977770:-1:exon
so has part: feature:977081-977221:-1:exon
so has part: feature:974639-974794:-1:exon
so has part: feature:973638-973780:-1:exon
so has part: feature:969887-969968:-1:exon
so has part: feature:969625-969777:-1:exon
so has part: feature:968396-968503:-1:exon
so has part: feature:952860-952996:-1:exon
so has part: feature:949576-949641:-1:exon
so has part: feature:940477-940603:-1:exon
so has part: feature:922431-922546:-1:exon
so has part: feature:915445-915568:-1:exon
so has part: feature:909001-909230:-1:exon
so has part: feature:903882-904037:-1:exon
so has part: feature:894278-894512:-1:exon
so has part: feature:891222-891371:-1:exon
so has part: feature:876106-876297:-1:exon
so has part: feature:873530-873581:-1:exon
so has part: feature:871755-871849:-1:exon

XP_005051588.1
type: Protein
SIO_000068: ncbiprotein

position:871755:-1
position: 871755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010086:-1
position: 1010086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010024-1010086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1008468-1008585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002230-1002300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998183-998377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:990618-990718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:990055-990171:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:987983-988143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:981489-981751:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:980872-981090:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:979125-979295:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:978620-978695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:978074-978191:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:977659-977770:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:977081-977221:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:974639-974794:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:973638-973780:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:969887-969968:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:969625-969777:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:968396-968503:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:952860-952996:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:949576-949641:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:940477-940603:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:922431-922546:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:915445-915568:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:909001-909230:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:903882-904037:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:894278-894512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:891222-891371:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:876106-876297:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:873530-873581:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:871755-871849:-1:exon

RCN2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1020825..1031113
location: region:1020825-1031113:1
so has part: feature:1020825-1031113:1:exon
subclass of: SO_0000010

101822198
type: Gene
SIO_000068: ncbigene

position:1020825:1
position: 1020825
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1031113:1
position: 1031113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020825-1031113:1:exon

RCN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RCN2
product: reticulocalbin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_016300757.1
SIO_010081: RCN2
subclass of: SO_0000673
so part of: RCN2
location: join(<1020825..1020975,1023729..1023925,1026338..1026439,1027164..1027260,1028941..1029083,1030355..1031113)
location: region:1020825-1031113:1
so has part: feature:1020825-1020975:1:exon
so has part: feature:1023729-1023925:1:exon
so has part: feature:1026338-1026439:1:exon
so has part: feature:1027164-1027260:1:exon
so has part: feature:1028941-1029083:1:exon
so has part: feature:1030355-1031113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1020825-1020975:1:exon

position:1020975:1
position: 1020975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1023729-1023925:1:exon

position:1023729:1
position: 1023729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1023925:1
position: 1023925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1026338-1026439:1:exon

position:1026338:1
position: 1026338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026439:1
position: 1026439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1027164-1027260:1:exon

position:1027164:1
position: 1027164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027260:1
position: 1027260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1028941-1029083:1:exon

position:1028941:1
position: 1028941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029083:1
position: 1029083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1030355-1031113:1:exon

position:1030355:1
position: 1030355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RCN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RCN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulocalbin-2
translation: PGPGRAADGARSCSQEEAEEYARLSPEEQQRRLRNIVKKIDADADGLLSEDELSSWIQQSFKHYVTQEAKQHFSDYDKDGDGLVSWKEYNLQMYDRVIDFDENAVLEDQEEESFRQEKKRFEKANRDDVPALNVDEYIAFEHPEEVEYMTDFVIQEALEEHDKDGDGFVSLEEFLGDYRRDPTAGEDPEWILVEKDRFVNDYDKDQDGKLNPQELLSWIVPNNQGIAQEEALHLIEEMDLNDDKKLSEAEILKNQDLFLNSEATDYGRQLHDERFYHEEL
SIO_010081: RCN2
subclass of: SO_0000673
so part of: RCN2
location: join(<1020825..1020975,1023729..1023925,1026338..1026439,1027164..1027260,1028941..1029083,1030355..1030507)
location: region:1020825-1030507:1
so has part: feature:1020825-1020975:1:exon
so has part: feature:1023729-1023925:1:exon
so has part: feature:1026338-1026439:1:exon
so has part: feature:1027164-1027260:1:exon
so has part: feature:1028941-1029083:1:exon
so has part: feature:1030355-1030507:1:exon

XP_016156243.1
type: Protein
SIO_000068: ncbiprotein

position:1030507:1
position: 1030507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020825-1020975:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1023729-1023925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1026338-1026439:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1027164-1027260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1028941-1029083:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1030355-1030507:1:exon

PSTPIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PSTPIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1036391..1084902
location: region:1036391-1084902:1
so has part: feature:1036391-1084902:1:exon
subclass of: SO_0000010

101805745
type: Gene
SIO_000068: ncbigene

position:1036391:1
position: 1036391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084902:1
position: 1084902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036391-1084902:1:exon

PSTPIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PSTPIP1
product: proline-serine-threonine phosphatase interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300758.1
SIO_010081: PSTPIP1
subclass of: SO_0000673
so part of: PSTPIP1
location: join(1036391..1036695,1052198..1052298,1056075..1056149,1065529..1065563,1068548..1068654,1070507..1070569,1071569..1071667,1073318..1073363,1074140..1074219,1076570..1076668,1077221..1077328,1080024..1080058,1081544..1081614,1082818..1082909,1084459..1084902)
location: region:1036391-1084902:1
so has part: feature:1036391-1036695:1:exon
so has part: feature:1052198-1052298:1:exon
so has part: feature:1056075-1056149:1:exon
so has part: feature:1065529-1065563:1:exon
so has part: feature:1068548-1068654:1:exon
so has part: feature:1070507-1070569:1:exon
so has part: feature:1071569-1071667:1:exon
so has part: feature:1073318-1073363:1:exon
so has part: feature:1074140-1074219:1:exon
so has part: feature:1076570-1076668:1:exon
so has part: feature:1077221-1077328:1:exon
so has part: feature:1080024-1080058:1:exon
so has part: feature:1081544-1081614:1:exon
so has part: feature:1082818-1082909:1:exon
so has part: feature:1084459-1084902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1036391-1036695:1:exon

position:1036695:1
position: 1036695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052198-1052298:1:exon

position:1052198:1
position: 1052198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052298:1
position: 1052298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1056075-1056149:1:exon

position:1056075:1
position: 1056075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056149:1
position: 1056149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1065529-1065563:1:exon

position:1065529:1
position: 1065529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065563:1
position: 1065563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1068548-1068654:1:exon

position:1068548:1
position: 1068548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068654:1
position: 1068654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1070507-1070569:1:exon

position:1070507:1
position: 1070507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070569:1
position: 1070569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1071569-1071667:1:exon

position:1071569:1
position: 1071569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071667:1
position: 1071667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1073318-1073363:1:exon

position:1073318:1
position: 1073318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073363:1
position: 1073363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1074140-1074219:1:exon

position:1074140:1
position: 1074140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1074219:1
position: 1074219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1076570-1076668:1:exon

position:1076570:1
position: 1076570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076668:1
position: 1076668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1077221-1077328:1:exon

position:1077221:1
position: 1077221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077328:1
position: 1077328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1080024-1080058:1:exon

position:1080024:1
position: 1080024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1080058:1
position: 1080058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1081544-1081614:1:exon

position:1081544:1
position: 1081544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081614:1
position: 1081614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1082818-1082909:1:exon

position:1082818:1
position: 1082818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082909:1
position: 1082909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1084459-1084902:1:exon

position:1084459:1
position: 1084459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSTPIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PSTPIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-serine-threonine phosphatase-interacting protein 1
translation: MTQLQFKDAFWCKEFTFHTGYEVLVQRLLEGKKMCKDVEDLLKQRAQAEERYGKELVQIARKAGGQTEINTLKAAFEMLKQQIESVGNSHIQLAVMLKEELKGIEEFRERQKEQRKKYESAMERMQKSKLSHYKKTMESKKTYEQKCREADEAEQSLERTSASGNQKQTEKSQNKAKQCRDAANEAENVYKQNIEQLDKVRTEWEQEHIKTCEVFQLQECDRITILRNSLWVHCNQLSLQCVKDDELYEEVRVSLENCAVESDIDYFIKTKMTGTQPPGNYSPGPSQSCGMMKRFSGLLHGSSKNNTETATPSAPPLEGTDGVYASLLINEKPGTSQDYRVLYDYTAQNVDELDISEGDIVVVIAENEDGWWTAERNGQRGFVPGSYLEKL
SIO_010081: PSTPIP1
subclass of: SO_0000673
so part of: PSTPIP1
location: join(1036663..1036695,1052198..1052298,1056075..1056149,1065529..1065563,1068548..1068654,1070507..1070569,1071569..1071667,1073318..1073363,1074140..1074219,1076570..1076668,1077221..1077328,1080024..1080058,1081544..1081614,1082818..1082909,1084459..1084590)
location: region:1036663-1084590:1
so has part: feature:1036663-1036695:1:exon
so has part: feature:1052198-1052298:1:exon
so has part: feature:1056075-1056149:1:exon
so has part: feature:1065529-1065563:1:exon
so has part: feature:1068548-1068654:1:exon
so has part: feature:1070507-1070569:1:exon
so has part: feature:1071569-1071667:1:exon
so has part: feature:1073318-1073363:1:exon
so has part: feature:1074140-1074219:1:exon
so has part: feature:1076570-1076668:1:exon
so has part: feature:1077221-1077328:1:exon
so has part: feature:1080024-1080058:1:exon
so has part: feature:1081544-1081614:1:exon
so has part: feature:1082818-1082909:1:exon
so has part: feature:1084459-1084590:1:exon

XP_016156244.1
type: Protein
SIO_000068: ncbiprotein

position:1036663:1
position: 1036663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084590:1
position: 1084590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036663-1036695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052198-1052298:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1056075-1056149:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1065529-1065563:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1068548-1068654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1070507-1070569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1071569-1071667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073318-1073363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1074140-1074219:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076570-1076668:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1077221-1077328:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1080024-1080058:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1081544-1081614:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1082818-1082909:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1084459-1084590:1:exon

TSPAN3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: TSPAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1095466..1117480)
location: region:1095466-1117480:-1
so has part: feature:1095466-1117480:-1:exon
subclass of: SO_0000010

101814954
type: Gene
SIO_000068: ncbigene

position:1095466:-1
position: 1095466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117480:-1
position: 1117480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095466-1117480:-1:exon

TSPAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPAN3
product: tetraspanin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_016300936.1
SIO_010081: TSPAN3
subclass of: SO_0000673
so part of: TSPAN3
location: complement(join(1095466..1096098,1100478..1100561,1100804..1100956,1101263..1101364,1104929..1105003,1106021..1106212,1117103..1117177,1117399..1117480))
location: region:1095466-1117480:-1
so has part: feature:1117399-1117480:-1:exon
so has part: feature:1117103-1117177:-1:exon
so has part: feature:1106021-1106212:-1:exon
so has part: feature:1104929-1105003:-1:exon
so has part: feature:1101263-1101364:-1:exon
so has part: feature:1100804-1100956:-1:exon
so has part: feature:1100478-1100561:-1:exon
so has part: feature:1095466-1096098:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1117399-1117480:-1:exon

position:1117399:-1
position: 1117399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1117103-1117177:-1:exon

position:1117103:-1
position: 1117103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117177:-1
position: 1117177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1106021-1106212:-1:exon

position:1106021:-1
position: 1106021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1106212:-1
position: 1106212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1104929-1105003:-1:exon

position:1104929:-1
position: 1104929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105003:-1
position: 1105003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1101263-1101364:-1:exon

position:1101263:-1
position: 1101263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1101364:-1
position: 1101364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1100804-1100956:-1:exon

position:1100804:-1
position: 1100804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100956:-1
position: 1100956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1100478-1100561:-1:exon

position:1100478:-1
position: 1100478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100561:-1
position: 1100561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1095466-1096098:-1:exon

position:1096098:-1
position: 1096098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSPAN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: TSPAN3
product: tetraspanin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005051533.2
SIO_010081: TSPAN3
subclass of: SO_0000673
so part of: TSPAN3
location: complement(join(1095466..1096098,1100478..1100561,1100804..1100956,1101263..1101364,1104929..1105003,1106021..1106212,1117103..1117266))
location: region:1095466-1117266:-1
so has part: feature:1117103-1117266:-1:exon
so has part: feature:1106021-1106212:-1:exon
so has part: feature:1104929-1105003:-1:exon
so has part: feature:1101263-1101364:-1:exon
so has part: feature:1100804-1100956:-1:exon
so has part: feature:1100478-1100561:-1:exon
so has part: feature:1095466-1096098:-1:exon

position:1117266:-1
position: 1117266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117103-1117266:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106021-1106212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104929-1105003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1101263-1101364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100804-1100956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1100478-1100561:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1095466-1096098:-1:exon

TSPAN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-3
translation: MGQCGITSSKTVLVFLNLIFWAAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVIIIAVGTLLFIIGLIGCCATIRESRCGLATFVIILLLVFITEVVVVVLGYIYRAKVEDEVDHSIRKVYNGYNGTNPDAASRAIDYVQRQLRCCGIHNYSDWENTVWFKQTKNNSVPLSCCKAALSNCTGSLTRPMDLYSEGCEALVVKKLQEIMMYVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLIAGGTYA
SIO_010081: TSPAN3
subclass of: SO_0000673
so part of: TSPAN3
location: complement(join(1096006..1096098,1100478..1100561,1100804..1100956,1101263..1101364,1104929..1105003,1106021..1106212,1117103..1117165))
location: region:1096006-1117165:-1
so has part: feature:1117103-1117165:-1:exon
so has part: feature:1106021-1106212:-1:exon
so has part: feature:1104929-1105003:-1:exon
so has part: feature:1101263-1101364:-1:exon
so has part: feature:1100804-1100956:-1:exon
so has part: feature:1100478-1100561:-1:exon
so has part: feature:1096006-1096098:-1:exon

XP_016156422.1
type: Protein
SIO_000068: ncbiprotein

position:1096006:-1
position: 1096006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117165:-1
position: 1117165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117103-1117165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106021-1106212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104929-1105003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1101263-1101364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100804-1100956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1100478-1100561:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1096006-1096098:-1:exon

TSPAN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: TSPAN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-3
translation: MGQCGITSSKTVLVFLNLIFWAAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVIIIAVGTLLFIIGLIGCCATIRESRCGLATFVIILLLVFITEVVVVVLGYIYRAKVEDEVDHSIRKVYNGYNGTNPDAASRAIDYVQRQLRCCGIHNYSDWENTVWFKQTKNNSVPLSCCKAALSNCTGSLTRPMDLYSEGCEALVVKKLQEIMMYVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLIAGGTYA
SIO_010081: TSPAN3
subclass of: SO_0000673
so part of: TSPAN3
location: complement(join(1096006..1096098,1100478..1100561,1100804..1100956,1101263..1101364,1104929..1105003,1106021..1106212,1117103..1117165))
location: region:1096006-1117165:-1
so has part: feature:1117103-1117165:-1:exon
so has part: feature:1106021-1106212:-1:exon
so has part: feature:1104929-1105003:-1:exon
so has part: feature:1101263-1101364:-1:exon
so has part: feature:1100804-1100956:-1:exon
so has part: feature:1100478-1100561:-1:exon
so has part: feature:1096006-1096098:-1:exon

XP_005051590.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1117103-1117165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1106021-1106212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1104929-1105003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1101263-1101364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100804-1100956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1100478-1100561:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1096006-1096098:-1:exon

PEAK1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1135811..1197962)
location: region:1135811-1197962:-1
so has part: feature:1135811-1197962:-1:exon
subclass of: SO_0000010

101815662
type: Gene
SIO_000068: ncbigene

position:1135811:-1
position: 1135811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197962:-1
position: 1197962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1135811-1197962:-1:exon

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005051536.1
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1135811..1142411,1151511..1151804,1152017..1152122,1152193..1152541,1159676..1159872,1161676..1161792,1168068..1171313,1197811..1197962))
location: region:1135811-1197962:-1
so has part: feature:1197811-1197962:-1:exon
so has part: feature:1168068-1171313:-1:exon
so has part: feature:1161676-1161792:-1:exon
so has part: feature:1159676-1159872:-1:exon
so has part: feature:1152193-1152541:-1:exon
so has part: feature:1152017-1152122:-1:exon
so has part: feature:1151511-1151804:-1:exon
so has part: feature:1135811-1142411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1197811-1197962:-1:exon

position:1197811:-1
position: 1197811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1168068-1171313:-1:exon

position:1168068:-1
position: 1168068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171313:-1
position: 1171313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1161676-1161792:-1:exon

position:1161676:-1
position: 1161676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161792:-1
position: 1161792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1159676-1159872:-1:exon

position:1159676:-1
position: 1159676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159872:-1
position: 1159872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1152193-1152541:-1:exon

position:1152193:-1
position: 1152193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152541:-1
position: 1152541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1152017-1152122:-1:exon

position:1152017:-1
position: 1152017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1152122:-1
position: 1152122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1151511-1151804:-1:exon

position:1151511:-1
position: 1151511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151804:-1
position: 1151804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1135811-1142411:-1:exon

position:1142411:-1
position: 1142411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_005051537.1
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1135811..1142411,1151511..1151804,1152017..1152122,1152193..1152541,1159676..1159872,1168068..1171313,1181272..1181361,1197811..1197962))
location: region:1135811-1197962:-1
so has part: feature:1197811-1197962:-1:exon
so has part: feature:1181272-1181361:-1:exon
so has part: feature:1168068-1171313:-1:exon
so has part: feature:1159676-1159872:-1:exon
so has part: feature:1152193-1152541:-1:exon
so has part: feature:1152017-1152122:-1:exon
so has part: feature:1151511-1151804:-1:exon
so has part: feature:1135811-1142411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1197811-1197962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181272-1181361:-1:exon

position:1181272:-1
position: 1181272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181361:-1
position: 1181361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1168068-1171313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159676-1159872:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152193-1152541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152017-1152122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151511-1151804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1135811-1142411:-1:exon

PEAK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PEAK1
product: pseudopodium enriched atypical kinase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005051535.1
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1135811..1142411,1151511..1151804,1152017..1152122,1152193..1152541,1159676..1159872,1161676..1161792,1168068..1171313,1181272..1181361,1197811..1197962))
location: region:1135811-1197962:-1
so has part: feature:1197811-1197962:-1:exon
so has part: feature:1181272-1181361:-1:exon
so has part: feature:1168068-1171313:-1:exon
so has part: feature:1161676-1161792:-1:exon
so has part: feature:1159676-1159872:-1:exon
so has part: feature:1152193-1152541:-1:exon
so has part: feature:1152017-1152122:-1:exon
so has part: feature:1151511-1151804:-1:exon
so has part: feature:1135811-1142411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1197811-1197962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1181272-1181361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1168068-1171313:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1161676-1161792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1159676-1159872:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1152193-1152541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1152017-1152122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1151511-1151804:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1135811-1142411:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pseudopodium-enriched atypical kinase 1 isoform X2
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKANANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCGELAVLEQCESKAPPAGWNRNKAALNKKPLNNNNEEEIEGYGHVPRPYGNSEGVGKIPNNNNNGLTEVLKEIAGLDSTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVGGMKDSQSKHVILSGSTEVISNEGGRFCYPEFSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTASSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQAKDVPKAPRNALKGLETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPVEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSEAKKASSSPSSPVTPGTPVASSAASPVCVHAKLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYAKSSKNAIKVPIVINPNAYDNLAIYRSFLGTSGELSIKDKTTSVISHTYEEIETESKESEAIGSKPTELPQAKGVANSSECRLGSVAQKVQEFNNCLSKSQISPQRSYSADHSSPSRVQKATPEPAAKADMTPDGSVGSGGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKSTLVRPKSLFTSQPEVESSKTENAGTKMQKDPLSQPAATPSPKPARATPSATSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKDREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCEPAQAEPRAELESAIAEALAKDKGETQEKPPESSEHNTASHSSPPQAPKKIPSQVPDDPALEELSPRVPRAVFVKQDNGGSASVIPASSARGPPGEEEKEEAPNSPDLSACSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLAEQETVNNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPAEKPRAAPSATGSVRSLGAGSARERCSASMESLPGRRPSQARQARGAQKPQRQALYRGIENREEVAGKIRGLHADSLRKLALKCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNDYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDEAAEAEEEEEREEEEKEPEQKGGGAAPSPGGSRGGSPGRQGTLSRPRSRVVVITREVPRLTVADFVRESAPRHAKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSAPSPEATEPSPGTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFHALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1141251..1142411,1151511..1151804,1152017..1152122,1152193..1152541,1159676..1159872,1168068..1171201))
location: region:1141251-1171201:-1
so has part: feature:1168068-1171201:-1:exon
so has part: feature:1159676-1159872:-1:exon
so has part: feature:1152193-1152541:-1:exon
so has part: feature:1152017-1152122:-1:exon
so has part: feature:1151511-1151804:-1:exon
so has part: feature:1141251-1142411:-1:exon

XP_005051594.1
type: Protein
SIO_000068: ncbiprotein

position:1141251:-1
position: 1141251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171201:-1
position: 1171201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1168068-1171201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1159676-1159872:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1152193-1152541:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152017-1152122:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1151511-1151804:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141251-1142411:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pseudopodium-enriched atypical kinase 1 isoform X1
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKANANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCGELAVLEQCESKAPPAGWNRNKAALNKKPLNNNNEEEIEGYGHVPRPYGNSEGVGKIPNNNNNGLTEVLKEIAGLDSTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVGGMKDSQSKHVILSGSTEVISNEGGRFCYPEFSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTASSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQAKDVPKAPRNALKGLETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPVEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSEAKKASSSPSSPVTPGTPVASSAASPVCVHAKLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYAKSSKNAIKVPIVINPNAYDNLAIYRSFLGTSGELSIKDKTTSVISHTYEEIETESKESEAIGSKPTELPQAKGVANSSECRLGSVAQKVQEFNNCLSKSQISPQRSYSADHSSPSRVQKATPEPAAKADMTPDGSVGSGGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKSTLVRPKSLFTSQPEVESSKTENAGTKMQKDPLSQPAATPSPKPARATPSATSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKDREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCEPAQAEPRAELESAIAEALAKDKGETQEKPPESSEHNTASHSSPPQAPKKIPSTPEHCGINGSPEFQDMIKRLKKALKEFPLMGNCVSEYSGQVPDDPALEELSPRVPRAVFVKQDNGGSASVIPASSARGPPGEEEKEEAPNSPDLSACSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLAEQETVNNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPAEKPRAAPSATGSVRSLGAGSARERCSASMESLPGRRPSQARQARGAQKPQRQALYRGIENREEVAGKIRGLHADSLRKLALKCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNDYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDEAAEAEEEEEREEEEKEPEQKGGGAAPSPGGSRGGSPGRQGTLSRPRSRVVVITREVPRLTVADFVRESAPRHAKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSAPSPEATEPSPGTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFHALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1141251..1142411,1151511..1151804,1152017..1152122,1152193..1152541,1159676..1159872,1161676..1161792,1168068..1171201))
location: region:1141251-1171201:-1
so has part: feature:1168068-1171201:-1:exon
so has part: feature:1161676-1161792:-1:exon
so has part: feature:1159676-1159872:-1:exon
so has part: feature:1152193-1152541:-1:exon
so has part: feature:1152017-1152122:-1:exon
so has part: feature:1151511-1151804:-1:exon
so has part: feature:1141251-1142411:-1:exon

XP_005051592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1168068-1171201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1161676-1161792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159676-1159872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152193-1152541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152017-1152122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151511-1151804:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1141251-1142411:-1:exon

PEAK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PEAK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pseudopodium-enriched atypical kinase 1 isoform X1
translation: MSACNTFTEHVWKPGECKNCFKPKSLHQLPPVSEKKPLSHGNLKANANQSSSQRGRGSGSFRPPVAKKPTIAVKPTMMVADGLCGELAVLEQCESKAPPAGWNRNKAALNKKPLNNNNEEEIEGYGHVPRPYGNSEGVGKIPNNNNNGLTEVLKEIAGLDSTPQLTGNETNSRETFLGRINNCYKRSLERKIPPSCMVGGMKDSQSKHVILSGSTEVISNEGGRFCYPEFSSGDESEDDTFFGSMQEEHESWDESDEELLAMEIRMRGQPRFANFRANTLSPVPFCVDKKWNTVPLRNKSLQRICAVDYDDSYDEILNGYGEETVILYGQESMQSMVSSDSTSPDSSLTEESRSGTASSSSQKLCNGGLSPSTPQDLKVIEPEYESLCDNQQAKDVPKAPRNALKGLETHKAVLALRLEEKDGKIAVQTDTQENKSSSDAAGQAVTINLVPVEEQAKPYRVVNMEQPVCKPYTVVDVSAAMTSECKENQTETSEAKKASSSPSSPVTPGTPVASSAASPVCVHAKLKKSSAIRYQEVWTSSTSPRQKIPKVELIGNSSGPSVPPRKTSHKSAPTSPTATNVSSKTIPVKSPNLSEIKFNSYNNAGMPPFPIIIHDEPTYAKSSKNAIKVPIVINPNAYDNLAIYRSFLGTSGELSIKDKTTSVISHTYEEIETESKESEAIGSKPTELPQAKGVANSSECRLGSVAQKVQEFNNCLSKSQISPQRSYSADHSSPSRVQKATPEPAAKADMTPDGSVGSGGGRENASTVLSQIVASIQPPQSPPETPQSAPKSCSVEELYSLPPEGDATKSTLVRPKSLFTSQPEVESSKTENAGTKMQKDPLSQPAATPSPKPARATPSATSPQAEQAPPFPPPRSTSSPYHASNLLQRHFSNWAKPNSPTRSTEAESILHSEGRRPDAKPKRWISFKSFFRRRKADDEEEREKDREKGKLVGLDGTVIHMLPPPPVQRHHWFSEAKSDSSEKPSIVFMYRCEPAQAEPRAELESAIAEALAKDKGETQEKPPESSEHNTASHSSPPQAPKKIPSTPEHCGINGSPEFQDMIKRLKKALKEFPLMGNCVSEYSGQVPDDPALEELSPRVPRAVFVKQDNGGSASVIPASSARGPPGEEEKEEAPNSPDLSACSATYSNLGQSRAAMIPPKQPRQPKGALDDAIAFGGLAEQETVNNLQPTPPPLPKKTILRANTEPTPRDLQKQALENNLCIMANPTYDIDTNWEASSACSSVSLELKVLDNESGDSLDRPAEKPRAAPSATGSVRSLGAGSARERCSASMESLPGRRPSQARQARGAQKPQRQALYRGIENREEVAGKIRGLHADSLRKLALKCEDLFMAGQKDQLRFGVDSWSDFRLTSDKPCCEAGDAVYYPASYAKDPLNDYAVKICKSKAKESQQYYHSLSIRQSLAINFNIQQDCGHFLAEVPVRLLPWEDDEAAEAEEEEEREEEEKEPEQKGGGAAPSPGGSRGGSPGRQGTLSRPRSRVVVITREVPRLTVADFVRESAPRHAKSPDLYERQVCLLLLQLCLGLEHLKPYHITHCDLRLENLLLVHSRPGGSAPSPEATEPSPGTACPARLIVSNFSQAKQKSHMVDPEVLRDQSRLAPEIITATQYKKCDEFQTGILIYEMLHLPNPFDENPELKEKEYTCADLPKIPCRSLYSQGLQQLASCLLNPNPSERILISEAKGILQCLLWGPREDLFHALSTSSNPSRRDAILQNWLDIKRTLLMIKFAEKSLERDCGIILEDWLCCQYLAFATTDSLHRIVRLMKQH
SIO_010081: PEAK1
subclass of: SO_0000673
so part of: PEAK1
location: complement(join(1141251..1142411,1151511..1151804,1152017..1152122,1152193..1152541,1159676..1159872,1161676..1161792,1168068..1171201))
location: region:1141251-1171201:-1
so has part: feature:1168068-1171201:-1:exon
so has part: feature:1161676-1161792:-1:exon
so has part: feature:1159676-1159872:-1:exon
so has part: feature:1152193-1152541:-1:exon
so has part: feature:1152017-1152122:-1:exon
so has part: feature:1151511-1151804:-1:exon
so has part: feature:1141251-1142411:-1:exon

XP_005051593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1168068-1171201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1161676-1161792:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159676-1159872:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1152193-1152541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1152017-1152122:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1151511-1151804:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1141251-1142411:-1:exon

LOC107603855
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1154906..1208558
location: region:1154906-1208558:1
so has part: feature:1154906-1208558:1:exon
subclass of: SO_0000011

107603855
type: Gene
SIO_000068: ncbigene

position:1154906:1
position: 1154906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1208558:1
position: 1208558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1154906-1208558:1:exon

LOC107603855
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107603855
product: uncharacterized LOC107603855
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001611671.1
SIO_010081: LOC107603855
subclass of: SO_0000673
so part of: LOC107603855
location: join(1154906..1155026,1184852..1184922,1185626..1185692,1207449..1207554,1208268..1208558)
location: region:1154906-1208558:1
so has part: feature:1154906-1155026:1:exon
so has part: feature:1184852-1184922:1:exon
so has part: feature:1185626-1185692:1:exon
so has part: feature:1207449-1207554:1:exon
so has part: feature:1208268-1208558:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1154906-1155026:1:exon

position:1155026:1
position: 1155026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1184852-1184922:1:exon

position:1184852:1
position: 1184852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184922:1
position: 1184922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1185626-1185692:1:exon

position:1185626:1
position: 1185626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185692:1
position: 1185692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1207449-1207554:1:exon

position:1207449:1
position: 1207449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1207554:1
position: 1207554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1208268-1208558:1:exon

position:1208268:1
position: 1208268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107603853
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603853
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1225845..1239951
location: region:1225845-1239951:1
so has part: feature:1225845-1239951:1:exon
subclass of: SO_0000011

107603853
type: Gene
SIO_000068: ncbigene

position:1225845:1
position: 1225845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1239951:1
position: 1239951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225845-1239951:1:exon

LOC107603853
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59894
nc RNA class: lncRNA
gene: LOC107603853
product: uncharacterized LOC107603853
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001611662.1
SIO_010081: LOC107603853
subclass of: SO_0000673
so part of: LOC107603853
location: join(1225845..1226647,1232358..1232538,1233214..1233410,1239557..1239951)
location: region:1225845-1239951:1
so has part: feature:1225845-1226647:1:exon
so has part: feature:1232358-1232538:1:exon
so has part: feature:1233214-1233410:1:exon
so has part: feature:1239557-1239951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225845-1226647:1:exon

position:1226647:1
position: 1226647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1232358-1232538:1:exon

position:1232358:1
position: 1232358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1232538:1
position: 1232538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1233214-1233410:1:exon

position:1233214:1
position: 1233214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1233410:1
position: 1233410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1239557-1239951:1:exon

position:1239557:1
position: 1239557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMG20A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: HMG20A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1250047..1287190
location: region:1250047-1287190:1
so has part: feature:1250047-1287190:1:exon
subclass of: SO_0000010

101816258
type: Gene
SIO_000068: ncbigene

position:1250047:1
position: 1250047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287190:1
position: 1287190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1250047-1287190:1:exon

HMG20A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: HMG20A
product: high mobility group 20A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005051540.2
SIO_010081: HMG20A
subclass of: SO_0000673
so part of: HMG20A
location: join(1250047..1250095,1268369..1268461,1270511..1270658,1272459..1272674,1274747..1274879,1275246..1275277,1279452..1279527,1280419..1280634,1282008..1282151,1284472..1287190)
location: region:1250047-1287190:1
so has part: feature:1250047-1250095:1:exon
so has part: feature:1268369-1268461:1:exon
so has part: feature:1270511-1270658:1:exon
so has part: feature:1272459-1272674:1:exon
so has part: feature:1274747-1274879:1:exon
so has part: feature:1275246-1275277:1:exon
so has part: feature:1279452-1279527:1:exon
so has part: feature:1280419-1280634:1:exon
so has part: feature:1282008-1282151:1:exon
so has part: feature:1284472-1287190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1250047-1250095:1:exon

position:1250095:1
position: 1250095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1268369-1268461:1:exon

position:1268369:1
position: 1268369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1268461:1
position: 1268461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1270511-1270658:1:exon

position:1270511:1
position: 1270511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270658:1
position: 1270658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1272459-1272674:1:exon

position:1272459:1
position: 1272459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272674:1
position: 1272674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1274747-1274879:1:exon

position:1274747:1
position: 1274747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274879:1
position: 1274879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1275246-1275277:1:exon

position:1275246:1
position: 1275246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1275277:1
position: 1275277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1279452-1279527:1:exon

position:1279452:1
position: 1279452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279527:1
position: 1279527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1280419-1280634:1:exon

position:1280419:1
position: 1280419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280634:1
position: 1280634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1282008-1282151:1:exon

position:1282008:1
position: 1282008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282151:1
position: 1282151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1284472-1287190:1:exon

position:1284472:1
position: 1284472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMG20A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: HMG20A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein 20A
translation: MENLVAGSNLPPLFTDEDGSKEGSEINVTGLANSESSFSGGTSQPVNNPDLVEDLSQPQQQQNESSNAAETTEQKPEEEQQRTKRGGWAKGRKRKKPLRDSNAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKRRYLDEADRDKERYMRELEQYQKTEAYKVFSRKAQDRQKGKSHRQDGARQPAHDHEKEADTKERSVFDIPIFTEEFLNHSKAREAELRQLRKSNMEFEERNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHLDTLRQALTSSFAGVPLPGSGETPTMETIDSYMNRLHSIILANPQENENLIATVRDVVNRLER
SIO_010081: HMG20A
subclass of: SO_0000673
so part of: HMG20A
location: join(1268373..1268461,1270511..1270658,1272459..1272674,1274747..1274879,1275246..1275277,1279452..1279527,1280419..1280634,1282008..1282144)
location: region:1268373-1282144:1
so has part: feature:1268373-1268461:1:exon
so has part: feature:1270511-1270658:1:exon
so has part: feature:1272459-1272674:1:exon
so has part: feature:1274747-1274879:1:exon
so has part: feature:1275246-1275277:1:exon
so has part: feature:1279452-1279527:1:exon
so has part: feature:1280419-1280634:1:exon
so has part: feature:1282008-1282144:1:exon

XP_005051597.1
type: Protein
SIO_000068: ncbiprotein

position:1268373:1
position: 1268373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282144:1
position: 1282144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268373-1268461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1270511-1270658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1272459-1272674:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1274747-1274879:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275246-1275277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1279452-1279527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1280419-1280634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1282008-1282144:1:exon

LINGO1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LINGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1427500..1490912)
location: region:1427500-1490912:-1
so has part: feature:1427500-1490912:-1:exon
subclass of: SO_0000010

101816586
type: Gene
SIO_000068: ncbigene

position:1427500:-1
position: 1427500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490912:-1
position: 1490912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427500-1490912:-1:exon

LINGO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LINGO1
product: leucine rich repeat and Ig domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005051541.2
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1427500..1429411,1486655..1486740,1490823..1490912))
location: region:1427500-1490912:-1
so has part: feature:1490823-1490912:-1:exon
so has part: feature:1486655-1486740:-1:exon
so has part: feature:1427500-1429411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1490823-1490912:-1:exon

position:1490823:-1
position: 1490823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1486655-1486740:-1:exon

position:1486655:-1
position: 1486655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486740:-1
position: 1486740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1427500-1429411:-1:exon

position:1429411:-1
position: 1429411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LINGO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LINGO1
product: leucine rich repeat and Ig domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_005051545.2
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1427500..1429411,1442652..1442730))
location: region:1427500-1442730:-1
so has part: feature:1442652-1442730:-1:exon
so has part: feature:1427500-1429411:-1:exon

position:1442730:-1
position: 1442730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442652-1442730:-1:exon

position:1442652:-1
position: 1442652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1427500-1429411:-1:exon

LINGO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LINGO1
product: leucine rich repeat and Ig domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_005051544.2
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1427500..1429411,1442368..1442622))
location: region:1427500-1442622:-1
so has part: feature:1442368-1442622:-1:exon
so has part: feature:1427500-1429411:-1:exon

position:1442622:-1
position: 1442622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1442368-1442622:-1:exon

position:1442368:-1
position: 1442368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1427500-1429411:-1:exon

LINGO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LINGO1
product: leucine rich repeat and Ig domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005051542.2
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1427500..1429411,1441889..1442192))
location: region:1427500-1442192:-1
so has part: feature:1441889-1442192:-1:exon
so has part: feature:1427500-1429411:-1:exon

position:1442192:-1
position: 1442192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441889-1442192:-1:exon

position:1441889:-1
position: 1441889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1427500-1429411:-1:exon

LINGO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LINGO1
product: leucine rich repeat and Ig domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005051543.2
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1427500..1429411,1436427..1436530))
location: region:1427500-1436530:-1
so has part: feature:1436427-1436530:-1:exon
so has part: feature:1427500-1429411:-1:exon

position:1436530:-1
position: 1436530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436427-1436530:-1:exon

position:1436427:-1
position: 1436427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1427500-1429411:-1:exon

LINGO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LINGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
translation: MHQKNSGFSQQTQLTNSVHEWKAEERPKPSAHLASDPPASCLHLTQVRDRMVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1427558..1429411,1486655..1486740,1490823..1490874))
location: region:1427558-1490874:-1
so has part: feature:1490823-1490874:-1:exon
so has part: feature:1486655-1486740:-1:exon
so has part: feature:1427558-1429411:-1:exon

XP_005051598.1
type: Protein
SIO_000068: ncbiprotein

position:1427558:-1
position: 1427558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490874:-1
position: 1490874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1490823-1490874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1486655-1486740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1427558-1429411:-1:exon

LINGO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LINGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X2
translation: MPPPRRNGSVGAAKAICTRREGQRVRDRMVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1427558..1429411,1441889..1441960))
location: region:1427558-1441960:-1
so has part: feature:1441889-1441960:-1:exon
so has part: feature:1427558-1429411:-1:exon

XP_005051599.1
type: Protein
SIO_000068: ncbiprotein

position:1441960:-1
position: 1441960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1441889-1441960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427558-1429411:-1:exon

LINGO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LINGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X3
translation: MWPGNRSDAVRDRMVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(join(1427558..1429411,1436427..1436453))
location: region:1427558-1436453:-1
so has part: feature:1436427-1436453:-1:exon
so has part: feature:1427558-1429411:-1:exon

XP_005051600.1
type: Protein
SIO_000068: ncbiprotein

position:1436453:-1
position: 1436453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436427-1436453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1427558-1429411:-1:exon

LINGO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LINGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X4
translation: MVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(1427558..1429399)
location: region:1427558-1429399:-1
so has part: feature:1427558-1429399:-1:exon

XP_005051601.1
type: Protein
SIO_000068: ncbiprotein

position:1429399:-1
position: 1429399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427558-1429399:-1:exon

LINGO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LINGO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X4
translation: MVAGEASMRSPILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKRFMVVPEGIPTETRLLDLGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRLKVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVDEGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLCIASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNMKMI
SIO_010081: LINGO1
subclass of: SO_0000673
so part of: LINGO1
location: complement(1427558..1429399)
location: region:1427558-1429399:-1
so has part: feature:1427558-1429399:-1:exon

XP_005051602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1427558-1429399:-1:exon

CSPG4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CSPG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1634195..1664733
location: region:1634195-1664733:1
so has part: feature:1634195-1664733:1:exon
subclass of: SO_0000010

101817610
type: Gene
SIO_000068: ncbigene

position:1634195:1
position: 1634195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664733:1
position: 1664733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634195-1664733:1:exon

CSPG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CSPG4
product: chondroitin sulfate proteoglycan 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300945.1
SIO_010081: CSPG4
subclass of: SO_0000673
so part of: CSPG4
location: join(1634195..1634517,1648095..1648258,1649241..1652819,1653097..1653399,1655171..1655347,1655690..1655866,1659719..1659917,1660077..1660211,1660363..1660517,1661415..1661598,1661794..1662099,1662171..1663540,1663700..1664733)
location: region:1634195-1664733:1
so has part: feature:1634195-1634517:1:exon
so has part: feature:1648095-1648258:1:exon
so has part: feature:1649241-1652819:1:exon
so has part: feature:1653097-1653399:1:exon
so has part: feature:1655171-1655347:1:exon
so has part: feature:1655690-1655866:1:exon
so has part: feature:1659719-1659917:1:exon
so has part: feature:1660077-1660211:1:exon
so has part: feature:1660363-1660517:1:exon
so has part: feature:1661415-1661598:1:exon
so has part: feature:1661794-1662099:1:exon
so has part: feature:1662171-1663540:1:exon
so has part: feature:1663700-1664733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1634195-1634517:1:exon

position:1634517:1
position: 1634517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1648095-1648258:1:exon

position:1648095:1
position: 1648095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1648258:1
position: 1648258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1649241-1652819:1:exon

position:1649241:1
position: 1649241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652819:1
position: 1652819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1653097-1653399:1:exon

position:1653097:1
position: 1653097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653399:1
position: 1653399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1655171-1655347:1:exon

position:1655171:1
position: 1655171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655347:1
position: 1655347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1655690-1655866:1:exon

position:1655690:1
position: 1655690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655866:1
position: 1655866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1659719-1659917:1:exon

position:1659719:1
position: 1659719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659917:1
position: 1659917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1660077-1660211:1:exon

position:1660077:1
position: 1660077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660211:1
position: 1660211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1660363-1660517:1:exon

position:1660363:1
position: 1660363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660517:1
position: 1660517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1661415-1661598:1:exon

position:1661415:1
position: 1661415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661598:1
position: 1661598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1661794-1662099:1:exon

position:1661794:1
position: 1661794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1662099:1
position: 1662099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1662171-1663540:1:exon

position:1662171:1
position: 1662171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663540:1
position: 1663540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1663700-1664733:1:exon

position:1663700:1
position: 1663700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSPG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CSPG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate proteoglycan 4
translation: MGGIATVLLLLLLAGHPQPLTAGPPAGASFFGDSFVEMPLADASRTVRLHLQLLTSQGNGLLFLAAGQPDHLLLQLRAGRLQARLQLGLEEVTLQSPAGLQLNNLAVHDVELLVEDGRMTLTIDGLFNSSADIGGPARELDIQHGLFAGGTGSLDLPYLAQAGPAFRGCLHLVTFNGLDVLSHLSAGGSSKTFHHVQEGCSTQFSAEPEEPFGFPGPHSYAAFPTWEARQEATIEFVITTSATQAPLVYHAGLENDFFYLEISNGRLRGFVEKGNGVIVLHNNVFISDEQQHYVKVHTDVHKFEILIDYYASSTSNRGINNYLDLQGNLFIGGMDEKALQRLREHHLSFISLWTMTNHSFVGCLEDLRINQQRRSLQDAVITKDITAGCGKQDHYWDYEEAYEQDEASTSPPPNGFSGAPGLVVEPCRPDSSFPPAFANISRLLHVSPLIVSEGGMAYLEWKHAQPTVDLSLANIRQSQILFSITSDPRHGQLELDIPGSRSRRKFTLLDIVNRKVRYIHDGSEGPMDQLMLEVTVTTQQGVPECLRQGQVYLLPVMINPVNDAPQVTFPRGNHMTILKHTRKHLTTDILQVLDDDSSCDDLEFQLHGQQVEEGYVELDFHPGVPIEEFSCRDLEAGNVVYVHQGGTDLQLTLQVSDGTIPSPVATLRILAIDPDIRLLNNTGLSLPQGGAARITTANLSVETNAVEQRVAILYVLTEPLKYGEVEKQGSMGGEWKKVESFHQQDLEQGRIQYFSTDPEHRLEDSVEEVRFKVQVGQKLLPNNTFLVRIKRATIKMRTMAPLQMKNKRHRNITSKELEAMLEDPNSAPVPFHYMIVQAPKKGNLELLGNRLTEGFGFTEEDLQGNRLSYSVTIRNSQQAEDSFQFRVHAGEQHSPVYTYRISIGGDPDAPTLTNVLLTVPEGGQAVISKDHLFVQSVNSMDYAYEVIEGPAHGRLAWAASHGWASREEITEFTNDDILQRRLLYQHDDSETLEDDIPFVAVRQGEGSAEAEAEEVRGVFRVSIQPVNDHSPVRAVNRVFSVVRHGQHLLTTDDIAFTDKDSGFSDAQLVLTRKDILFGSIVSVDDRRHQVYRFTQDDLRKKKILFVHSGADRGWIQLQVSDGLHQTTALLEVQASDPYIRIVNNTGLVIHQGTRGSIDSSVLSLETNMDIRSDEEIRFLITTPPRWGTVLRGEQPVMAFSQRDLLAGEISYHHNGSRNARDELQFTVEANEVAVEDTLAISVFLDTHPSPLSIVNHREIYVFQGEAAGIKEEDLLVTHEEIPSQDIVYLVSSPPASGFLAMLQHSQDVNEQPSLDPIQSFTQEDINSGRVLYLHSKPNEERDRFVLDVTARSADPLEGVVVSLVVLPIAVPLDVHNITVPGGGSATISSSVLSIPNAYYPALGVEFRVLEPPRFGSLLSSQRPEQGGLHSFTWSEVENQQIQYRQDGPRSLTDSFTILANASEVSRQSHPRTLFVTIVPRSTKGPRLKVNAGLQLREGATAVLSPHILSAEDEDSPAEEVTYSIQPPANGKVVLRSEPGAEIQRFTQAQIDNGLVLFVHQGALDGGFAFDLWDGENLSPGHFFLIRAQREPVISLARKQSLTVCPGALQPITSQNLQAVSNSPASSSTLYYSIEQAPRLGRLTTSQGDEIRNFTQAQVDSKLIFYQHEMPGKPFWLVQDAIRFRVVTPTTISDSFILLVLISFEENCPQRLTQLWKNAGLQLTRAQQAEIDTSVLDASNLLSQILVPERAGYDVVFLVTEPPAHGQLLVAGVPLEQSRPFFLQSDLAARRLVYAHGGDSVSKDHFSFKAWLQPREQQPARPPQDGVVISEEFNITVASSTTPPRVVKRQEVLQVPPGSVVTLSQEYLDVADPLVSPQEMVYSVLQRPLAGHVASAHNPREPIGRFTQADVNAGRVVFVAAGSRAPGSLALRLSSGHHPPIQTSLEIEVLPAMSTSASPALLEVPQELNRAPVSHHHLLGAAPRGAGNVQYRITREPRFGQ…
SIO_010081: CSPG4
subclass of: SO_0000673
so part of: CSPG4
location: join(1634436..1634517,1648095..1648258,1649241..1652819,1653097..1653399,1655171..1655347,1655690..1655866,1659719..1659917,1660077..1660211,1660363..1660517,1661415..1661598,1661794..1662099,1662171..1663540,1663700..1663927)
location: region:1634436-1663927:1
so has part: feature:1634436-1634517:1:exon
so has part: feature:1648095-1648258:1:exon
so has part: feature:1649241-1652819:1:exon
so has part: feature:1653097-1653399:1:exon
so has part: feature:1655171-1655347:1:exon
so has part: feature:1655690-1655866:1:exon
so has part: feature:1659719-1659917:1:exon
so has part: feature:1660077-1660211:1:exon
so has part: feature:1660363-1660517:1:exon
so has part: feature:1661415-1661598:1:exon
so has part: feature:1661794-1662099:1:exon
so has part: feature:1662171-1663540:1:exon
so has part: feature:1663700-1663927:1:exon

XP_016156431.1
type: Protein
SIO_000068: ncbiprotein

position:1634436:1
position: 1634436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663927:1
position: 1663927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1634436-1634517:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1648095-1648258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1649241-1652819:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1653097-1653399:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1655171-1655347:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1655690-1655866:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1659719-1659917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1660077-1660211:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1660363-1660517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1661415-1661598:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1661794-1662099:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1662171-1663540:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1663700-1663927:1:exon

SNX33
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SNX33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1671756..1676746)
location: region:1671756-1676746:-1
so has part: feature:1671756-1676746:-1:exon
subclass of: SO_0000010

101817815
type: Gene
SIO_000068: ncbigene

position:1671756:-1
position: 1671756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1676746:-1
position: 1676746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1671756-1676746:-1:exon

SNX33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SNX33
product: sorting nexin 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005051547.2
SIO_010081: SNX33
subclass of: SO_0000673
so part of: SNX33
location: complement(join(1671756..1672373,1672447..1672754,1674506..1676746))
location: region:1671756-1676746:-1
so has part: feature:1674506-1676746:-1:exon
so has part: feature:1672447-1672754:-1:exon
so has part: feature:1671756-1672373:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1674506-1676746:-1:exon

position:1674506:-1
position: 1674506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1672447-1672754:-1:exon

position:1672447:-1
position: 1672447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1672754:-1
position: 1672754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1671756-1672373:-1:exon

position:1672373:-1
position: 1672373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SNX33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-33
translation: MALKARALYNFQSENKEEISIQENEELVIFSENSLDGWLQGQNSRGETGLFPASYVEILRSRSGSSYTDYSSSPVGSPGHDSSLYSASPNPGISYQGSFEDDDDDDWDDWDDACTVVEEPRSAPGTNGHPSPSLQYPAAYGHHQHASGYRPKPALERQDSMSSSKRGSVVGRNLNRFSCFVRSGVEAFILGDVPLMSKIAETYCIEMGSRGPQWRANPSPFICSVEDPTKQTKFKGIKSYISYKLTPSNINSPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQATGRFEEDFIEKRKRRLILWMEHMTSHPVLSQYEGFQHFLCCRDEKQWKLGKRRAEKDEMVGASFLLTIQIPTEHQDLQDVEDRVDAFKAFSKKMDDSVLQLTNVASELVRKHVGGFRKEFQKLGNAFQAISHSFHMDPPYSLDALNNAISHTGKTYEAVGEMFAEQPKNDLFLMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQRMSDEGRMDQEEADGIRKRCRVVGFALQAEMNHFHERRVADFKRMMQSYLRQQIVFYQRVSQQLEKTLRMYDNL
SIO_010081: SNX33
subclass of: SO_0000673
so part of: SNX33
location: complement(join(1672501..1672754,1674506..1675949))
location: region:1672501-1675949:-1
so has part: feature:1674506-1675949:-1:exon
so has part: feature:1672501-1672754:-1:exon

XP_005051604.1
type: Protein
SIO_000068: ncbiprotein

position:1672501:-1
position: 1672501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1675949:-1
position: 1675949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1674506-1675949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1672501-1672754:-1:exon

SNUPN
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SNUPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1675948..1686443
location: region:1675948-1686443:1
so has part: feature:1675948-1686443:1:exon
subclass of: SO_0000010

101805936
type: Gene
SIO_000068: ncbigene

position:1675948:1
position: 1675948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1686443:1
position: 1686443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675948-1686443:1:exon

SNUPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SNUPN
product: snurportin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051572.2
SIO_010081: SNUPN
subclass of: SO_0000673
so part of: SNUPN
location: join(1675948..1676081,1676658..1676751,1677978..1678154,1678925..1679029,1679131..1679227,1680058..1680155,1680438..1680515,1681556..1681636,1685374..1686443)
location: region:1675948-1686443:1
so has part: feature:1675948-1676081:1:exon
so has part: feature:1676658-1676751:1:exon
so has part: feature:1677978-1678154:1:exon
so has part: feature:1678925-1679029:1:exon
so has part: feature:1679131-1679227:1:exon
so has part: feature:1680058-1680155:1:exon
so has part: feature:1680438-1680515:1:exon
so has part: feature:1681556-1681636:1:exon
so has part: feature:1685374-1686443:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1675948-1676081:1:exon

position:1676081:1
position: 1676081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1676658-1676751:1:exon

position:1676658:1
position: 1676658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676751:1
position: 1676751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1677978-1678154:1:exon

position:1677978:1
position: 1677978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678154:1
position: 1678154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1678925-1679029:1:exon

position:1678925:1
position: 1678925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679029:1
position: 1679029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1679131-1679227:1:exon

position:1679131:1
position: 1679131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679227:1
position: 1679227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1680058-1680155:1:exon

position:1680058:1
position: 1680058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680155:1
position: 1680155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1680438-1680515:1:exon

position:1680438:1
position: 1680438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680515:1
position: 1680515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1681556-1681636:1:exon

position:1681556:1
position: 1681556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681636:1
position: 1681636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1685374-1686443:1:exon

position:1685374:1
position: 1685374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNUPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SNUPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: snurportin-1
translation: MAGAGSGRRWGSQRNATPPRPKTPPKTPPRPRQYRGLRDHHRALLLSGRTEAVPVSVSVSVSVSVSVSVSVSGPGPGCSLHPRRRLDYVNHARRLAEDDWAGVESEGEDREGEDAEEEAMDVDAGKKLPKRYANQLMLSEWLVDVPSDLEQEWVVVVCPVGKRALVVASRGTTAAYTKSGFCVNRFPSLLPGGNRHNSTGDKVYSILDCIYNEAKQTYYILDVMCWRGHPVYDCQTDFRFFWLSSKIQEEEGLGEKSRINPYKFVGLQNFPCSSDSLCELLATDFPFEVDGLLFYHKQTHYTPGSTPLVGWLRPYMVPEILGLAVPPTALTAKPDYAGRQLQQIIESKRSKKLAEEQGRPSGQEAARNGRYELEHLSTPQPEKSPGGRGGAVSQMES
SIO_010081: SNUPN
subclass of: SO_0000673
so part of: SNUPN
location: join(1675948..1676081,1676658..1676751,1677978..1678154,1678925..1679029,1679131..1679227,1680058..1680155,1680438..1680515,1681556..1681636,1685374..1685703)
location: region:1675948-1685703:1
so has part: feature:1675948-1676081:1:exon
so has part: feature:1676658-1676751:1:exon
so has part: feature:1677978-1678154:1:exon
so has part: feature:1678925-1679029:1:exon
so has part: feature:1679131-1679227:1:exon
so has part: feature:1680058-1680155:1:exon
so has part: feature:1680438-1680515:1:exon
so has part: feature:1681556-1681636:1:exon
so has part: feature:1685374-1685703:1:exon

XP_005051629.1
type: Protein
SIO_000068: ncbiprotein

position:1685703:1
position: 1685703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1675948-1676081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1676658-1676751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1677978-1678154:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1678925-1679029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1679131-1679227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680058-1680155:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680438-1680515:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681556-1681636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1685374-1685703:1:exon

PTPN9
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PTPN9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1689452..>1698825
location: region:1689452-1698825:1
so has part: feature:1689452-1698825:1:exon
subclass of: SO_0000010

101817999
type: Gene
SIO_000068: ncbigene

position:1689452:1
position: 1689452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698825:1
position: 1698825
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1689452-1698825:1:exon

PTPN9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PTPN9
product: protein tyrosine phosphatase, non-receptor type 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_005051548.2
SIO_010081: PTPN9
subclass of: SO_0000673
so part of: PTPN9
location: join(1689452..1691017,1692636..1692779,1693240..1693329,1693422..1693546,1694236..1694341,1695008..1695118,1695360..1695688,1696065..1696158,1696251..1696320,1696832..1696910,1697172..1697322,1697404..1697611,1698617..>1698825)
location: region:1689452-1698825:1
so has part: feature:1689452-1691017:1:exon
so has part: feature:1692636-1692779:1:exon
so has part: feature:1693240-1693329:1:exon
so has part: feature:1693422-1693546:1:exon
so has part: feature:1694236-1694341:1:exon
so has part: feature:1695008-1695118:1:exon
so has part: feature:1695360-1695688:1:exon
so has part: feature:1696065-1696158:1:exon
so has part: feature:1696251-1696320:1:exon
so has part: feature:1696832-1696910:1:exon
so has part: feature:1697172-1697322:1:exon
so has part: feature:1697404-1697611:1:exon
so has part: feature:1698617-1698825:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1689452-1691017:1:exon

position:1691017:1
position: 1691017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1692636-1692779:1:exon

position:1692636:1
position: 1692636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692779:1
position: 1692779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1693240-1693329:1:exon

position:1693240:1
position: 1693240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693329:1
position: 1693329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1693422-1693546:1:exon

position:1693422:1
position: 1693422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693546:1
position: 1693546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1694236-1694341:1:exon

position:1694236:1
position: 1694236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694341:1
position: 1694341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1695008-1695118:1:exon

position:1695008:1
position: 1695008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695118:1
position: 1695118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1695360-1695688:1:exon

position:1695360:1
position: 1695360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695688:1
position: 1695688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1696065-1696158:1:exon

position:1696065:1
position: 1696065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696158:1
position: 1696158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1696251-1696320:1:exon

position:1696251:1
position: 1696251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696320:1
position: 1696320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1696832-1696910:1:exon

position:1696832:1
position: 1696832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696910:1
position: 1696910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1697172-1697322:1:exon

position:1697172:1
position: 1697172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697322:1
position: 1697322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1697404-1697611:1:exon

position:1697404:1
position: 1697404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697611:1
position: 1697611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1698617-1698825:1:exon

position:1698617:1
position: 1698617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPN9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PTPN9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 9
translation: MAALATKQFLEEINKWTGQYNVSPLSWNVAVKFLMARKFDVLRAIELFHSYRETRLKEGIVKLKPHEEPLRSELLSGKFTILSVRDPSGASIALFTAKLHHPSKSVQHVVLQALFYLLDRAVESFETQRNGLVFIYDMAGSQYTNFELDLSKKILNLLKGAFPARLKKVFIVGAPMWFRVPYSIISLLLKEKLRERVQMVKMSELKEHLPRECLPEYLGGSLKLDPLSWNCRFLPQQNGHPDPLDELILVPLAAPKDNGSVHVPGPRSVTLQELLDHVSHKQKRGIYEEYEDIRRRSPAGTFVCSLAPYNQDKNRYGDVPCLDQTRVKLAKPYSRPELTDYINASFMDGYKQRNAYIGTQGPLENTYGDFWRMVWEQNVLVIVMTTRLEEGGRRKCGQYWPLEKDFQVCFGALTITNLGVENLNHYKKTILEIHSSETRERRLVSHFQYLSWPDYGVPSSAATLIDFLGAVKQQQRVAVSALGPRFKGHPGGPPVVVHCSAGIGRTGTFCALDICLSQLQDVGTLNIYQTVLRMRTQRAFSIQTPEQYHFCYTAVLEHAQRQGLLPAAPDRAAPGR
SIO_010081: PTPN9
subclass of: SO_0000673
so part of: PTPN9
location: join(1691006..1691017,1692636..1692779,1693240..1693329,1693422..1693546,1694236..1694341,1695008..1695118,1695360..1695688,1696065..1696158,1696251..1696320,1696832..1696910,1697172..1697322,1697404..1697611,1698617..>1698825)
location: region:1691006-1698825:1
so has part: feature:1691006-1691017:1:exon
so has part: feature:1692636-1692779:1:exon
so has part: feature:1693240-1693329:1:exon
so has part: feature:1693422-1693546:1:exon
so has part: feature:1694236-1694341:1:exon
so has part: feature:1695008-1695118:1:exon
so has part: feature:1695360-1695688:1:exon
so has part: feature:1696065-1696158:1:exon
so has part: feature:1696251-1696320:1:exon
so has part: feature:1696832-1696910:1:exon
so has part: feature:1697172-1697322:1:exon
so has part: feature:1697404-1697611:1:exon
so has part: feature:1698617-1698825:1:exon

XP_005051605.2
type: Protein
SIO_000068: ncbiprotein

position:1691006:1
position: 1691006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1691006-1691017:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1692636-1692779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693240-1693329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1693422-1693546:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694236-1694341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1695008-1695118:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1695360-1695688:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1696065-1696158:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1696251-1696320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1696832-1696910:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1697172-1697322:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1697404-1697611:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1698617-1698825:1:exon

SIN3A
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SIN3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1705974..1736167
location: region:1705974-1736167:1
so has part: feature:1705974-1736167:1:exon
subclass of: SO_0000010

101818315
type: Gene
SIO_000068: ncbigene

position:1705974:1
position: 1705974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1736167:1
position: 1736167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1705974-1736167:1:exon

SIN3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SIN3A
product: SIN3 transcription regulator family member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005051549.2
SIO_010081: SIN3A
subclass of: SO_0000673
so part of: SIN3A
location: join(1705974..1706119,1712146..1712366,1713783..1713959,1715373..1715479,1715968..1716132,1716655..1716772,1718658..1718909,1719577..1719729,1720850..1721008,1722210..1722299,1723670..1723788,1725135..1725345,1726780..1726896,1727587..1727825,1728932..1729115,1729449..1730022,1730465..1730634,1731634..1731807,1732490..1732582,1732937..1733031,1733200..1733407,1734732..1736167)
location: region:1705974-1736167:1
so has part: feature:1705974-1706119:1:exon
so has part: feature:1712146-1712366:1:exon
so has part: feature:1713783-1713959:1:exon
so has part: feature:1715373-1715479:1:exon
so has part: feature:1715968-1716132:1:exon
so has part: feature:1716655-1716772:1:exon
so has part: feature:1718658-1718909:1:exon
so has part: feature:1719577-1719729:1:exon
so has part: feature:1720850-1721008:1:exon
so has part: feature:1722210-1722299:1:exon
so has part: feature:1723670-1723788:1:exon
so has part: feature:1725135-1725345:1:exon
so has part: feature:1726780-1726896:1:exon
so has part: feature:1727587-1727825:1:exon
so has part: feature:1728932-1729115:1:exon
so has part: feature:1729449-1730022:1:exon
so has part: feature:1730465-1730634:1:exon
so has part: feature:1731634-1731807:1:exon
so has part: feature:1732490-1732582:1:exon
so has part: feature:1732937-1733031:1:exon
so has part: feature:1733200-1733407:1:exon
so has part: feature:1734732-1736167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1705974-1706119:1:exon

position:1706119:1
position: 1706119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1712146-1712366:1:exon

position:1712146:1
position: 1712146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1712366:1
position: 1712366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1713783-1713959:1:exon

position:1713783:1
position: 1713783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1713959:1
position: 1713959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1715373-1715479:1:exon

position:1715373:1
position: 1715373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1715479:1
position: 1715479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1715968-1716132:1:exon

position:1715968:1
position: 1715968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1716132:1
position: 1716132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1716655-1716772:1:exon

position:1716655:1
position: 1716655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1716772:1
position: 1716772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1718658-1718909:1:exon

position:1718658:1
position: 1718658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1718909:1
position: 1718909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1719577-1719729:1:exon

position:1719577:1
position: 1719577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1719729:1
position: 1719729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1720850-1721008:1:exon

position:1720850:1
position: 1720850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1721008:1
position: 1721008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1722210-1722299:1:exon

position:1722210:1
position: 1722210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1722299:1
position: 1722299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1723670-1723788:1:exon

position:1723670:1
position: 1723670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1723788:1
position: 1723788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1725135-1725345:1:exon

position:1725135:1
position: 1725135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1725345:1
position: 1725345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1726780-1726896:1:exon

position:1726780:1
position: 1726780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1726896:1
position: 1726896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1727587-1727825:1:exon

position:1727587:1
position: 1727587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727825:1
position: 1727825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1728932-1729115:1:exon

position:1728932:1
position: 1728932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1729115:1
position: 1729115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1729449-1730022:1:exon

position:1729449:1
position: 1729449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1730022:1
position: 1730022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1730465-1730634:1:exon

position:1730465:1
position: 1730465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1730634:1
position: 1730634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1731634-1731807:1:exon

position:1731634:1
position: 1731634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1731807:1
position: 1731807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1732490-1732582:1:exon

position:1732490:1
position: 1732490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1732582:1
position: 1732582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1732937-1733031:1:exon

position:1732937:1
position: 1732937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733031:1
position: 1733031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1733200-1733407:1:exon

position:1733200:1
position: 1733200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1733407:1
position: 1733407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1734732-1736167:1:exon

position:1734732:1
position: 1734732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIN3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SIN3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paired amphipathic helix protein Sin3a
translation: MKRRLDEQESPVYASQQRRLASSTEPFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTPSYQVSAVPQSSGSHGPAIAAVHGGHHHPAPVQPHGSQVVPSHTHPTPPAVPVQGQQQFQRLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQPAPQPTPAKISKPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTPSLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLNNKQQRPNQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKALRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETYPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPTGPHLSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDVEEEEEEEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWYIFMRLHQILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDIDVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLSENSNGATGGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRGQVQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAQQSHERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTETLHFVSINKYRVKYGTIFKTP
SIO_010081: SIN3A
subclass of: SO_0000673
so part of: SIN3A
location: join(1712178..1712366,1713783..1713959,1715373..1715479,1715968..1716132,1716655..1716772,1718658..1718909,1719577..1719729,1720850..1721008,1722210..1722299,1723670..1723788,1725135..1725345,1726780..1726896,1727587..1727825,1728932..1729115,1729449..1730022,1730465..1730634,1731634..1731807,1732490..1732582,1732937..1733031,1733200..1733407,1734732..1734962)
location: region:1712178-1734962:1
so has part: feature:1712178-1712366:1:exon
so has part: feature:1713783-1713959:1:exon
so has part: feature:1715373-1715479:1:exon
so has part: feature:1715968-1716132:1:exon
so has part: feature:1716655-1716772:1:exon
so has part: feature:1718658-1718909:1:exon
so has part: feature:1719577-1719729:1:exon
so has part: feature:1720850-1721008:1:exon
so has part: feature:1722210-1722299:1:exon
so has part: feature:1723670-1723788:1:exon
so has part: feature:1725135-1725345:1:exon
so has part: feature:1726780-1726896:1:exon
so has part: feature:1727587-1727825:1:exon
so has part: feature:1728932-1729115:1:exon
so has part: feature:1729449-1730022:1:exon
so has part: feature:1730465-1730634:1:exon
so has part: feature:1731634-1731807:1:exon
so has part: feature:1732490-1732582:1:exon
so has part: feature:1732937-1733031:1:exon
so has part: feature:1733200-1733407:1:exon
so has part: feature:1734732-1734962:1:exon

XP_005051606.1
type: Protein
SIO_000068: ncbiprotein

position:1712178:1
position: 1712178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1734962:1
position: 1734962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1712178-1712366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1713783-1713959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1715373-1715479:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1715968-1716132:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1716655-1716772:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1718658-1718909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1719577-1719729:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1720850-1721008:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1722210-1722299:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1723670-1723788:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1725135-1725345:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1726780-1726896:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1727587-1727825:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1728932-1729115:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1729449-1730022:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1730465-1730634:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1731634-1731807:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1732490-1732582:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1732937-1733031:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1733200-1733407:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1734732-1734962:1:exon

MAN2C1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MAN2C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1738263..1748966
location: region:1738263-1748966:1
so has part: feature:1738263-1748966:1:exon
subclass of: SO_0000010

101818525
type: Gene
SIO_000068: ncbigene

position:1738263:1
position: 1738263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1748966:1
position: 1748966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1738263-1748966:1:exon

MAN2C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MAN2C1
product: mannosidase alpha class 2C member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_005051550.2
SIO_010081: MAN2C1
subclass of: SO_0000673
so part of: MAN2C1
location: join(1738263..1738366,1739108..1739233,1739580..1739703,1740007..1740077,1740211..1740388,1740829..1741018,1741355..1741461,1741545..1741655,1742001..1742093,1742205..1742321,1742755..1742850,1743105..1743250,1743698..1743821,1743978..1744099,1744628..1744713,1745168..1745338,1745624..1745706,1745860..1745954,1746076..1746177,1746368..1746524,1746821..1746964,1747054..1747163,1747729..1747808,1747920..1748074,1748235..1748338,1748414..1748966)
location: region:1738263-1748966:1
so has part: feature:1738263-1738366:1:exon
so has part: feature:1739108-1739233:1:exon
so has part: feature:1739580-1739703:1:exon
so has part: feature:1740007-1740077:1:exon
so has part: feature:1740211-1740388:1:exon
so has part: feature:1740829-1741018:1:exon
so has part: feature:1741355-1741461:1:exon
so has part: feature:1741545-1741655:1:exon
so has part: feature:1742001-1742093:1:exon
so has part: feature:1742205-1742321:1:exon
so has part: feature:1742755-1742850:1:exon
so has part: feature:1743105-1743250:1:exon
so has part: feature:1743698-1743821:1:exon
so has part: feature:1743978-1744099:1:exon
so has part: feature:1744628-1744713:1:exon
so has part: feature:1745168-1745338:1:exon
so has part: feature:1745624-1745706:1:exon
so has part: feature:1745860-1745954:1:exon
so has part: feature:1746076-1746177:1:exon
so has part: feature:1746368-1746524:1:exon
so has part: feature:1746821-1746964:1:exon
so has part: feature:1747054-1747163:1:exon
so has part: feature:1747729-1747808:1:exon
so has part: feature:1747920-1748074:1:exon
so has part: feature:1748235-1748338:1:exon
so has part: feature:1748414-1748966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1738263-1738366:1:exon

position:1738366:1
position: 1738366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1739108-1739233:1:exon

position:1739108:1
position: 1739108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1739233:1
position: 1739233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1739580-1739703:1:exon

position:1739580:1
position: 1739580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1739703:1
position: 1739703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1740007-1740077:1:exon

position:1740007:1
position: 1740007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740077:1
position: 1740077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1740211-1740388:1:exon

position:1740211:1
position: 1740211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1740388:1
position: 1740388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1740829-1741018:1:exon

position:1740829:1
position: 1740829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741018:1
position: 1741018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1741355-1741461:1:exon

position:1741355:1
position: 1741355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741461:1
position: 1741461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1741545-1741655:1:exon

position:1741545:1
position: 1741545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1741655:1
position: 1741655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1742001-1742093:1:exon

position:1742001:1
position: 1742001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742093:1
position: 1742093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1742205-1742321:1:exon

position:1742205:1
position: 1742205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742321:1
position: 1742321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1742755-1742850:1:exon

position:1742755:1
position: 1742755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1742850:1
position: 1742850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1743105-1743250:1:exon

position:1743105:1
position: 1743105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1743250:1
position: 1743250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1743698-1743821:1:exon

position:1743698:1
position: 1743698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1743821:1
position: 1743821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1743978-1744099:1:exon

position:1743978:1
position: 1743978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1744099:1
position: 1744099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1744628-1744713:1:exon

position:1744628:1
position: 1744628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1744713:1
position: 1744713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1745168-1745338:1:exon

position:1745168:1
position: 1745168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1745338:1
position: 1745338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1745624-1745706:1:exon

position:1745624:1
position: 1745624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1745706:1
position: 1745706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1745860-1745954:1:exon

position:1745860:1
position: 1745860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1745954:1
position: 1745954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1746076-1746177:1:exon

position:1746076:1
position: 1746076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746177:1
position: 1746177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1746368-1746524:1:exon

position:1746368:1
position: 1746368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746524:1
position: 1746524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1746821-1746964:1:exon

position:1746821:1
position: 1746821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746964:1
position: 1746964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1747054-1747163:1:exon

position:1747054:1
position: 1747054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1747163:1
position: 1747163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1747729-1747808:1:exon

position:1747729:1
position: 1747729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1747808:1
position: 1747808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1747920-1748074:1:exon

position:1747920:1
position: 1747920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1748074:1
position: 1748074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1748235-1748338:1:exon

position:1748235:1
position: 1748235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1748338:1
position: 1748338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1748414-1748966:1:exon

position:1748414:1
position: 1748414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAN2C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MAN2C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-mannosidase 2C1 isoform X2
translation: MAAIKHRRTALERVEKFISDTYFTDCNLRGRLFGDRCPPASLSYFQTPRRIPYGEAVVQEFGPAQVGESFGPTWETCWFKVELSIPPAWAGREVHFVWESDGEGMVWRDAQPVQGLTKEGEKTSYILTRSLKESEPHSLTLYVELACNGLFGAGKGSMIAPPDPDRRVTLSKAELVVFNRDVYELLVDLEILLDMAQLLGEENQRSFQALYTANQMVNVCDVTDPSTFPAARDLAAAIFSQRNGESQHTIHAMGHCHIDSAWLWPYEETIRKCARSWVTVVHLMEHNPELTFACSQAQQFEWVQRSYPGLYARIRDFVAKGQFVPVGGTWVEMDGNLPSGESMVRQFLQGQRFFQQQFGRICSEFWLPDTFGYSAQLPQLMRGCGIQRFLTQKLSWNLVNSFPHHTFFWEGIDGSQVLTHFPPGDSYGMHGRVEEILKTVKNNKDKGRVNHSAFLFGFGDGGGGPTQKMLDRMKRMSDTDGLPRVQISTPDQLFSVLEKESSQLCTWVGELFLELHNGTYTTQAQIKKGNRECERILHDVEVLSTLAVAQDREFQYPSSQLQQLWRLLLLNQFHDVLPGSCIQLVVEDALQYYTEIRRAGAQLQEEAVESLCKDLLQPEEGGTQSTLVLNTLSWERTEVISRPGPNGKETLALVTVPSMGYALVQEPLVPPQPVVVCDAEEGFITMENGVISVCMDTMGHLVSLRLMDSKRESIADGCANQFALFDDVPLYWDAWDVMDYHLETRKPVTTVLEPLKVILGGGLRGSVRFSLKVGKSSTLTQEIILDAMCPYLRFQTQVEWKEAHKFLKVEFPVAVRSTNATYEIQFGHLQRPTHWNTSWDWARFEVWAHKWMDLSEHGFGVALLNDCKYGASVHRNILSLSLLRAPKSPDSTADIGLHQFTYAVMPHQGSFQEAGVIQQAYSLNFPLHVVPASCASCAPCPAWSAFSVSSPAVVLETVKQAEDRAEAVVVRLYEAHGSTVTAWLQTSLPVQEAVLCDLLERPVGWRSLPLEKQGLRLSFTPFRVLSVLLVLSC
SIO_010081: MAN2C1
subclass of: SO_0000673
so part of: MAN2C1
location: join(1738275..1738366,1739108..1739233,1739580..1739703,1740007..1740077,1740211..1740388,1740829..1741018,1741355..1741461,1741545..1741655,1742001..1742093,1742205..1742321,1742755..1742850,1743105..1743250,1743698..1743821,1743978..1744099,1744628..1744713,1745168..1745338,1745624..1745706,1745860..1745954,1746076..1746177,1746368..1746524,1746821..1746964,1747054..1747163,1747729..1747808,1747920..1748074,1748235..1748338,1748414..1748531)
location: region:1738275-1748531:1
so has part: feature:1738275-1738366:1:exon
so has part: feature:1739108-1739233:1:exon
so has part: feature:1739580-1739703:1:exon
so has part: feature:1740007-1740077:1:exon
so has part: feature:1740211-1740388:1:exon
so has part: feature:1740829-1741018:1:exon
so has part: feature:1741355-1741461:1:exon
so has part: feature:1741545-1741655:1:exon
so has part: feature:1742001-1742093:1:exon
so has part: feature:1742205-1742321:1:exon
so has part: feature:1742755-1742850:1:exon
so has part: feature:1743105-1743250:1:exon
so has part: feature:1743698-1743821:1:exon
so has part: feature:1743978-1744099:1:exon
so has part: feature:1744628-1744713:1:exon
so has part: feature:1745168-1745338:1:exon
so has part: feature:1745624-1745706:1:exon
so has part: feature:1745860-1745954:1:exon
so has part: feature:1746076-1746177:1:exon
so has part: feature:1746368-1746524:1:exon
so has part: feature:1746821-1746964:1:exon
so has part: feature:1747054-1747163:1:exon
so has part: feature:1747729-1747808:1:exon
so has part: feature:1747920-1748074:1:exon
so has part: feature:1748235-1748338:1:exon
so has part: feature:1748414-1748531:1:exon

XP_005051607.1
type: Protein
SIO_000068: ncbiprotein

position:1738275:1
position: 1738275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1748531:1
position: 1748531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1738275-1738366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1739108-1739233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1739580-1739703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740007-1740077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1740211-1740388:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1740829-1741018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1741355-1741461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741545-1741655:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742001-1742093:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742205-1742321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742755-1742850:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743105-1743250:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1743698-1743821:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1743978-1744099:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1744628-1744713:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1745168-1745338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1745624-1745706:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1745860-1745954:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1746076-1746177:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1746368-1746524:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1746821-1746964:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1747054-1747163:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1747729-1747808:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1747920-1748074:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1748235-1748338:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1748414-1748531:1:exon

MAN2C1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MAN2C1
product: mannosidase alpha class 2C member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005051551.2
SIO_010081: MAN2C1
subclass of: SO_0000673
so part of: MAN2C1
location: join(1738626..1738729,1739108..1739233,1739580..1739703,1740007..1740077,1740211..1740388,1740829..1741018,1741355..1741461,1741545..1741655,1742001..1742093,1742205..1742321,1742755..1742850,1743105..1743250,1743698..1743821,1743978..1744099,1744628..1744713,1745168..1745338,1745624..1745706,1745860..1745954,1746076..1746177,1746368..1746524,1746821..1746964,1747054..1747163,1747729..1747808,1747920..1748074,1748235..1748338,1748414..1748966)
location: region:1738626-1748966:1
so has part: feature:1738626-1738729:1:exon
so has part: feature:1739108-1739233:1:exon
so has part: feature:1739580-1739703:1:exon
so has part: feature:1740007-1740077:1:exon
so has part: feature:1740211-1740388:1:exon
so has part: feature:1740829-1741018:1:exon
so has part: feature:1741355-1741461:1:exon
so has part: feature:1741545-1741655:1:exon
so has part: feature:1742001-1742093:1:exon
so has part: feature:1742205-1742321:1:exon
so has part: feature:1742755-1742850:1:exon
so has part: feature:1743105-1743250:1:exon
so has part: feature:1743698-1743821:1:exon
so has part: feature:1743978-1744099:1:exon
so has part: feature:1744628-1744713:1:exon
so has part: feature:1745168-1745338:1:exon
so has part: feature:1745624-1745706:1:exon
so has part: feature:1745860-1745954:1:exon
so has part: feature:1746076-1746177:1:exon
so has part: feature:1746368-1746524:1:exon
so has part: feature:1746821-1746964:1:exon
so has part: feature:1747054-1747163:1:exon
so has part: feature:1747729-1747808:1:exon
so has part: feature:1747920-1748074:1:exon
so has part: feature:1748235-1748338:1:exon
so has part: feature:1748414-1748966:1:exon

position:1738626:1
position: 1738626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1738626-1738729:1:exon

position:1738729:1
position: 1738729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1739108-1739233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1739580-1739703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740007-1740077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1740211-1740388:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1740829-1741018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1741355-1741461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741545-1741655:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742001-1742093:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742205-1742321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742755-1742850:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743105-1743250:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1743698-1743821:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1743978-1744099:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1744628-1744713:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1745168-1745338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1745624-1745706:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1745860-1745954:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1746076-1746177:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1746368-1746524:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1746821-1746964:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1747054-1747163:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1747729-1747808:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1747920-1748074:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1748235-1748338:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1748414-1748966:1:exon

MAN2C1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MAN2C1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-mannosidase 2C1 isoform X1
translation: MAAIKHRRTALERVEKFISDTYFTDCNLRGRLFGDRCPPASLSYFQTPRRIPYGEAVVQEFGPAQVGESFGPTWETCWFKVELSIPPAWAGREVHFVWESDGEGMVWRDAQPVQGLTKEGEKTSYILTRSLKESEPHSLTLYVELACNGLFGAGKGSMIAPPDPDRRVTLSKAELVVFNRDVYELLVDLEILLDMAQLLGEENQRSFQALYTANQMVNVCDVTDPSTFPAARDLAAAIFSQRNGESQHTIHAMGHCHIDSAWLWPYEETIRKCARSWVTVVHLMEHNPELTFACSQAQQFEWVQRSYPGLYARIRDFVAKGQFVPVGGTWVEMDGNLPSGESMVRQFLQGQRFFQQQFGRICSEFWLPDTFGYSAQLPQLMRGCGIQRFLTQKLSWNLVNSFPHHTFFWEGIDGSQVLTHFPPGDSYGMHGRVEEILKTVKNNKDKGRVNHSAFLFGFGDGGGGPTQKMLDRMKRMSDTDGLPRVQISTPDQLFSVLEKESSQLCTWVGELFLELHNGTYTTQAQIKKGNRECERILHDVEVLSTLAVAQDREFQYPSSQLQQLWRLLLLNQFHDVLPGSCIQLVVEDALQYYTEIRRAGAQLQEEAVESLCKDLLQPEEGGTQSTLVLNTLSWERTEVISRPGPNGKETLALVTVPSMGYALVQEPLVPPQPVVVCDAEEGFITMENGVISVCMDTMGHLVSLRLMDSKRESIADGCANQFALFDDVPLYWDAWDVMDYHLETRKPVTTVLEPLKVILGGGLRGSVRFSLKVGKSSTLTQEIILDAMCPYLRFQTQVEWKEAHKFLKVEFPVAVRSTNATYEIQFGHLQRPTHWNTSWDWARFEVWAHKWMDLSEHGFGVALLNDCKYGASVHRNILSLSLLRAPKSPDSTADIGLHQFTYAVMPHQGSFQEAGVIQQAYSLNFPLHVVPASCASCAPCPAWSAFSVSSPAVVLETVKQAEDRAEAVVVRLYEAHGSTVTAWLQTSLPVQEAVLCDLLERPVGWRSLPLEKQGLRLSFTPFRVLSVLLVLSC
SIO_010081: MAN2C1
subclass of: SO_0000673
so part of: MAN2C1
location: join(1738638..1738729,1739108..1739233,1739580..1739703,1740007..1740077,1740211..1740388,1740829..1741018,1741355..1741461,1741545..1741655,1742001..1742093,1742205..1742321,1742755..1742850,1743105..1743250,1743698..1743821,1743978..1744099,1744628..1744713,1745168..1745338,1745624..1745706,1745860..1745954,1746076..1746177,1746368..1746524,1746821..1746964,1747054..1747163,1747729..1747808,1747920..1748074,1748235..1748338,1748414..1748531)
location: region:1738638-1748531:1
so has part: feature:1738638-1738729:1:exon
so has part: feature:1739108-1739233:1:exon
so has part: feature:1739580-1739703:1:exon
so has part: feature:1740007-1740077:1:exon
so has part: feature:1740211-1740388:1:exon
so has part: feature:1740829-1741018:1:exon
so has part: feature:1741355-1741461:1:exon
so has part: feature:1741545-1741655:1:exon
so has part: feature:1742001-1742093:1:exon
so has part: feature:1742205-1742321:1:exon
so has part: feature:1742755-1742850:1:exon
so has part: feature:1743105-1743250:1:exon
so has part: feature:1743698-1743821:1:exon
so has part: feature:1743978-1744099:1:exon
so has part: feature:1744628-1744713:1:exon
so has part: feature:1745168-1745338:1:exon
so has part: feature:1745624-1745706:1:exon
so has part: feature:1745860-1745954:1:exon
so has part: feature:1746076-1746177:1:exon
so has part: feature:1746368-1746524:1:exon
so has part: feature:1746821-1746964:1:exon
so has part: feature:1747054-1747163:1:exon
so has part: feature:1747729-1747808:1:exon
so has part: feature:1747920-1748074:1:exon
so has part: feature:1748235-1748338:1:exon
so has part: feature:1748414-1748531:1:exon

XP_005051608.2
type: Protein
SIO_000068: ncbiprotein

position:1738638:1
position: 1738638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1738638-1738729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1739108-1739233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1739580-1739703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1740007-1740077:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1740211-1740388:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1740829-1741018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1741355-1741461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1741545-1741655:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1742001-1742093:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1742205-1742321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1742755-1742850:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1743105-1743250:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1743698-1743821:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1743978-1744099:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1744628-1744713:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1745168-1745338:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1745624-1745706:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1745860-1745954:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1746076-1746177:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1746368-1746524:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1746821-1746964:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1747054-1747163:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1747729-1747808:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1747920-1748074:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1748235-1748338:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1748414-1748531:1:exon

NEIL1
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: NEIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1749161..1752570)
location: region:1749161-1752570:-1
so has part: feature:1749161-1752570:-1:exon
subclass of: SO_0000010

101818856
type: Gene
SIO_000068: ncbigene

position:1749161:-1
position: 1749161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752570:-1
position: 1752570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1749161-1752570:-1:exon

NEIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: NEIL1
product: nei like DNA glycosylase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016300813.1
SIO_010081: NEIL1
subclass of: SO_0000673
so part of: NEIL1
location: complement(join(1749161..1749480,1749649..1749865,1749977..1750050,1750369..1750396,1750848..1750966,1751097..1751196,1751688..1751760,1751910..1752029,1752119..1752570))
location: region:1749161-1752570:-1
so has part: feature:1752119-1752570:-1:exon
so has part: feature:1751910-1752029:-1:exon
so has part: feature:1751688-1751760:-1:exon
so has part: feature:1751097-1751196:-1:exon
so has part: feature:1750848-1750966:-1:exon
so has part: feature:1750369-1750396:-1:exon
so has part: feature:1749977-1750050:-1:exon
so has part: feature:1749649-1749865:-1:exon
so has part: feature:1749161-1749480:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1752119-1752570:-1:exon

position:1752119:-1
position: 1752119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1751910-1752029:-1:exon

position:1751910:-1
position: 1751910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752029:-1
position: 1752029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1751688-1751760:-1:exon

position:1751688:-1
position: 1751688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751760:-1
position: 1751760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1751097-1751196:-1:exon

position:1751097:-1
position: 1751097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751196:-1
position: 1751196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1750848-1750966:-1:exon

position:1750848:-1
position: 1750848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750966:-1
position: 1750966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1750369-1750396:-1:exon

position:1750369:-1
position: 1750369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750396:-1
position: 1750396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1749977-1750050:-1:exon

position:1749977:-1
position: 1749977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750050:-1
position: 1750050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1749649-1749865:-1:exon

position:1749649:-1
position: 1749649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749865:-1
position: 1749865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1749161-1749480:-1:exon

position:1749480:-1
position: 1749480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: NEIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 1
translation: MPECPELHLAGRFINGACGALVFAGGVERSPVGRGPEVPFRCEAYSISAVARGKELRLTLSALDAAAGPPPQDLVFRFGMSGSFRLCPAAELPRHAHLRFLTRESPPRALCFVDPRRFGSWRLGDAWQAERGPCVISEYQAFRENVLKNLDDRAFDKPICEALLNQKYFNGIGNYLRAEILYRLKIPPFEKARTVLEALKEQEMRKKDPSLTLSKKVKLRQENPDLLELCHTVPKEVIAAELLDPEHTDNYAAFKDWLQCYLVPGMSSLRDRNGRTIWFQGQPGPMAPKGQRPRKTPRKKSPQVKADPEAPSPKVTPRAAKQRRKAAVKPLKSEVKEEEREEEEEEADGPRKGRARGRRKVTAAPALPEVPLSVRRSCRTSARRGKGAAPDV
SIO_010081: NEIL1
subclass of: SO_0000673
so part of: NEIL1
location: complement(join(1749461..1749480,1749649..1749865,1749977..1750050,1750369..1750396,1750848..1750966,1751097..1751196,1751688..1751760,1751910..1752029,1752119..1752546))
location: region:1749461-1752546:-1
so has part: feature:1752119-1752546:-1:exon
so has part: feature:1751910-1752029:-1:exon
so has part: feature:1751688-1751760:-1:exon
so has part: feature:1751097-1751196:-1:exon
so has part: feature:1750848-1750966:-1:exon
so has part: feature:1750369-1750396:-1:exon
so has part: feature:1749977-1750050:-1:exon
so has part: feature:1749649-1749865:-1:exon
so has part: feature:1749461-1749480:-1:exon

XP_016156299.1
type: Protein
SIO_000068: ncbiprotein

position:1749461:-1
position: 1749461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752546:-1
position: 1752546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1752119-1752546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1751910-1752029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1751688-1751760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1751097-1751196:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1750848-1750966:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1750369-1750396:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1749977-1750050:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1749649-1749865:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1749461-1749480:-1:exon

LOC107603843
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1752697..1755034
location: region:1752697-1755034:1
so has part: feature:1752697-1755034:1:exon
subclass of: SO_0000010

107603843
type: Gene
SIO_000068: ncbigene

position:1752697:1
position: 1752697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1755034:1
position: 1755034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1752697-1755034:1:exon

LOC107603843
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107603843
product: C-type lectin domain family 4 member E-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300760.1
SIO_010081: LOC107603843
subclass of: SO_0000673
so part of: LOC107603843
location: join(1752697..1752774,1752980..1753055,1754075..1754166,1754486..1754637,1754837..1755034)
location: region:1752697-1755034:1
so has part: feature:1752697-1752774:1:exon
so has part: feature:1752980-1753055:1:exon
so has part: feature:1754075-1754166:1:exon
so has part: feature:1754486-1754637:1:exon
so has part: feature:1754837-1755034:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1752697-1752774:1:exon

position:1752774:1
position: 1752774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1752980-1753055:1:exon

position:1752980:1
position: 1752980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1753055:1
position: 1753055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1754075-1754166:1:exon

position:1754075:1
position: 1754075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1754166:1
position: 1754166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1754486-1754637:1:exon

position:1754486:1
position: 1754486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1754637:1
position: 1754637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1754837-1755034:1:exon

position:1754837:1
position: 1754837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107603843
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107603843
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: C-type lectin domain family 4 member E-like
translation: MNWAESEQNCSGMGSQLVVINSKAEQEFLSEQIKQPPQREYFYIGLFVDKEVDPFGHSSDQPXSLQQQLLEWKCHSAVPQGTDRGWTCCPEGWRRFQRSCCFLSLARMNWAESEQNCSGMGSQLVVINSKAEQEFLSEQIKQPPQREYFYIGLFVDKEGRWQWVDKTPYDATAA
SIO_010081: LOC107603843
subclass of: SO_0000673
so part of: LOC107603843
location: join(1752697..1752774,1752980..1753055,1754075..1754166,1754486..1754637,1754837..1754962)
location: region:1752697-1754962:1
so has part: feature:1752697-1752774:1:exon
so has part: feature:1752980-1753055:1:exon
so has part: feature:1754075-1754166:1:exon
so has part: feature:1754486-1754637:1:exon
so has part: feature:1754837-1754962:1:exon

XP_016156246.1
type: Protein
SIO_000068: ncbiprotein

position:1754962:1
position: 1754962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1752697-1752774:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1752980-1753055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1754075-1754166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1754486-1754637:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1754837-1754962:1:exon

COMMD4
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: COMMD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1755204..1757167)
location: region:1755204-1757167:-1
so has part: feature:1755204-1757167:-1:exon
subclass of: SO_0000010

101806120
type: Gene
SIO_000068: ncbigene

position:1755204:-1
position: 1755204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757167:-1
position: 1757167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1755204-1757167:-1:exon

COMMD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: COMMD4
product: COMM domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_016300811.1
SIO_010081: COMMD4
subclass of: SO_0000673
so part of: COMMD4
location: complement(join(1755204..1755400,1755519..1755695,1755788..1755868,1756079..1756198,1756317..1756356,1756589..1756654,1756737..1756808,1756906..1757167))
location: region:1755204-1757167:-1
so has part: feature:1756906-1757167:-1:exon
so has part: feature:1756737-1756808:-1:exon
so has part: feature:1756589-1756654:-1:exon
so has part: feature:1756317-1756356:-1:exon
so has part: feature:1756079-1756198:-1:exon
so has part: feature:1755788-1755868:-1:exon
so has part: feature:1755519-1755695:-1:exon
so has part: feature:1755204-1755400:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1756906-1757167:-1:exon

position:1756906:-1
position: 1756906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1756737-1756808:-1:exon

position:1756737:-1
position: 1756737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756808:-1
position: 1756808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1756589-1756654:-1:exon

position:1756589:-1
position: 1756589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756654:-1
position: 1756654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1756317-1756356:-1:exon

position:1756317:-1
position: 1756317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756356:-1
position: 1756356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1756079-1756198:-1:exon

position:1756079:-1
position: 1756079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756198:-1
position: 1756198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1755788-1755868:-1:exon

position:1755788:-1
position: 1755788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1755868:-1
position: 1755868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1755519-1755695:-1:exon

position:1755519:-1
position: 1755519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1755695:-1
position: 1755695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1755204-1755400:-1:exon

position:1755400:-1
position: 1755400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COMMD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: COMMD4
product: COMM domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005051573.2
SIO_010081: COMMD4
subclass of: SO_0000673
so part of: COMMD4
location: complement(join(1755204..1755386,1755519..1755695,1755788..1755868,1756079..1756198,1756317..1756356,1756589..1756654,1756737..1756808,1756906..1757166))
location: region:1755204-1757166:-1
so has part: feature:1756906-1757166:-1:exon
so has part: feature:1756737-1756808:-1:exon
so has part: feature:1756589-1756654:-1:exon
so has part: feature:1756317-1756356:-1:exon
so has part: feature:1756079-1756198:-1:exon
so has part: feature:1755788-1755868:-1:exon
so has part: feature:1755519-1755695:-1:exon
so has part: feature:1755204-1755386:-1:exon

position:1757166:-1
position: 1757166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1756906-1757166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1756737-1756808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1756589-1756654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1756317-1756356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1756079-1756198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755788-1755868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1755519-1755695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1755204-1755386:-1:exon

position:1755386:-1
position: 1755386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

COMMD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: COMMD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COMM domain-containing protein 4 isoform X1
translation: MRFRFCGDLDCPDWVLAEISTLAKISSVKLKLICAQVLRDLLGEAIEYDKILKLTSDAKLESGDVKATIAVLSFILSSAAKHNVDSESLSSELQQLGLPKEHASGLCRSYEEKQSPLQDRLRACSLRLSQLGSVHWRVDYTLSSSELQEVNEPVVHLTFNVRDREGDKMTAVPVTLSANKFWVLLAELKQAQTLMNTLL
SIO_010081: COMMD4
subclass of: SO_0000673
so part of: COMMD4
location: complement(join(1755346..1755386,1755519..1755695,1755788..1755868,1756079..1756198,1756317..1756356,1756589..1756654,1756737..1756808,1756906..1756908))
location: region:1755346-1756908:-1
so has part: feature:1756906-1756908:-1:exon
so has part: feature:1756737-1756808:-1:exon
so has part: feature:1756589-1756654:-1:exon
so has part: feature:1756317-1756356:-1:exon
so has part: feature:1756079-1756198:-1:exon
so has part: feature:1755788-1755868:-1:exon
so has part: feature:1755519-1755695:-1:exon
so has part: feature:1755346-1755386:-1:exon

XP_005051630.2
type: Protein
SIO_000068: ncbiprotein

position:1755346:-1
position: 1755346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756908:-1
position: 1756908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1756906-1756908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1756737-1756808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1756589-1756654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1756317-1756356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1756079-1756198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755788-1755868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1755519-1755695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1755346-1755386:-1:exon

COMMD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: COMMD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: COMM domain-containing protein 4 isoform X2
translation: MRFRFCGDLDCPDWVLAEISTLAKISSVKLKLICAQVLRDLLGEAIEYDKILKLTSDAKLESGDVKATIAVLSFILSSAAKHNVDSESLSSELQQLGLPKEHASGLCRSYEEKQSPLQDRLRACSLRLSQLGSVHWRVDYTLSSSELQEVNEPVVHLTFNVRDREGDKMTAVPVTLSANKFWVLLAVLSLQS
SIO_010081: COMMD4
subclass of: SO_0000673
so part of: COMMD4
location: complement(join(1755381..1755400,1755519..1755695,1755788..1755868,1756079..1756198,1756317..1756356,1756589..1756654,1756737..1756808,1756906..1756908))
location: region:1755381-1756908:-1
so has part: feature:1756906-1756908:-1:exon
so has part: feature:1756737-1756808:-1:exon
so has part: feature:1756589-1756654:-1:exon
so has part: feature:1756317-1756356:-1:exon
so has part: feature:1756079-1756198:-1:exon
so has part: feature:1755788-1755868:-1:exon
so has part: feature:1755519-1755695:-1:exon
so has part: feature:1755381-1755400:-1:exon

XP_016156297.1
type: Protein
SIO_000068: ncbiprotein

position:1755381:-1
position: 1755381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1756906-1756908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1756737-1756808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1756589-1756654:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1756317-1756356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1756079-1756198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1755788-1755868:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1755519-1755695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1755381-1755400:-1:exon

LOC101819378
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101819378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1759537..1765471)
location: region:1759537-1765471:-1
so has part: feature:1759537-1765471:-1:exon
subclass of: SO_0000010

101819378
type: Gene
SIO_000068: ncbigene

position:1759537:-1
position: 1759537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1765471:-1
position: 1765471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1759537-1765471:-1:exon

LOC101819378
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101819378
product: uncharacterized LOC101819378
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300761.1
SIO_010081: LOC101819378
subclass of: SO_0000673
so part of: LOC101819378
location: complement(join(1759537..1759812,1759984..1760097,1760213..1760319,1760622..1760776,1761087..1761145,1761289..1761413,1761494..1761630,1761874..1761932,1762056..1762159,1762575..1762729,1763341..1763399,1763857..1764039,1765418..1765471))
location: region:1759537-1765471:-1
so has part: feature:1765418-1765471:-1:exon
so has part: feature:1763857-1764039:-1:exon
so has part: feature:1763341-1763399:-1:exon
so has part: feature:1762575-1762729:-1:exon
so has part: feature:1762056-1762159:-1:exon
so has part: feature:1761874-1761932:-1:exon
so has part: feature:1761494-1761630:-1:exon
so has part: feature:1761289-1761413:-1:exon
so has part: feature:1761087-1761145:-1:exon
so has part: feature:1760622-1760776:-1:exon
so has part: feature:1760213-1760319:-1:exon
so has part: feature:1759984-1760097:-1:exon
so has part: feature:1759537-1759812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1765418-1765471:-1:exon

position:1765418:-1
position: 1765418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1763857-1764039:-1:exon

position:1763857:-1
position: 1763857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764039:-1
position: 1764039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1763341-1763399:-1:exon

position:1763341:-1
position: 1763341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763399:-1
position: 1763399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1762575-1762729:-1:exon

position:1762575:-1
position: 1762575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762729:-1
position: 1762729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1762056-1762159:-1:exon

position:1762056:-1
position: 1762056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762159:-1
position: 1762159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1761874-1761932:-1:exon

position:1761874:-1
position: 1761874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1761932:-1
position: 1761932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1761494-1761630:-1:exon

position:1761494:-1
position: 1761494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1761630:-1
position: 1761630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1761289-1761413:-1:exon

position:1761289:-1
position: 1761289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1761413:-1
position: 1761413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1761087-1761145:-1:exon

position:1761087:-1
position: 1761087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1761145:-1
position: 1761145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1760622-1760776:-1:exon

position:1760622:-1
position: 1760622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760776:-1
position: 1760776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1760213-1760319:-1:exon

position:1760213:-1
position: 1760213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760319:-1
position: 1760319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1759984-1760097:-1:exon

position:1759984:-1
position: 1759984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760097:-1
position: 1760097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1759537-1759812:-1:exon

position:1759812:-1
position: 1759812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101819378
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101819378
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC101819378
translation: MEHGDMDCGHKDIPDLPAPAHVLPLQFRLLGIAYTPALGSRDSESYRQLEGDVRLMVSAGGGWDTLGSLGSCEVPGPAGLNQMLSSYESFLQANVLEFMNGSVAVRGEVLFRGDAPAPTNSHLIRTVVTEASKGRSIFSWQLDPQSVQSGGFSLENLDPEKLSISLTGSQVGMSRMDPLEQLISEVTSSVSAFYHVRNFTISQIINLSGNTEITGDLYLDTVVHADVTDVLEALTSLSDLSMDLTSLSVEGSKLGLYVYPLSFLVTNRNFSQKLQDPLSEEHHNLSMELGDVVARVLSDYPSFLKAIIKEFLPGSVLCHGNMIFRHPAPPSMEVLRTLVLSVGPNHALGDSDIHVDPYSLAVGEDTLDPALPQPGFPAYGVAIMVIGGLCIIAAPVVLVCLGTKRLGWQSGRALWDRRDPEVGIQTLEMDNQGFWTEDSEDGHFEWQNTSA
SIO_010081: LOC101819378
subclass of: SO_0000673
so part of: LOC101819378
location: complement(join(1759768..1759812,1759984..1760097,1760213..1760319,1760622..1760776,1761087..1761145,1761289..1761413,1761494..1761630,1761874..1761932,1762056..1762159,1762575..1762729,1763341..1763399,1763857..1764039,1765418..1765471))
location: region:1759768-1765471:-1
so has part: feature:1765418-1765471:-1:exon
so has part: feature:1763857-1764039:-1:exon
so has part: feature:1763341-1763399:-1:exon
so has part: feature:1762575-1762729:-1:exon
so has part: feature:1762056-1762159:-1:exon
so has part: feature:1761874-1761932:-1:exon
so has part: feature:1761494-1761630:-1:exon
so has part: feature:1761289-1761413:-1:exon
so has part: feature:1761087-1761145:-1:exon
so has part: feature:1760622-1760776:-1:exon
so has part: feature:1760213-1760319:-1:exon
so has part: feature:1759984-1760097:-1:exon
so has part: feature:1759768-1759812:-1:exon

XP_016156247.1
type: Protein
SIO_000068: ncbiprotein

position:1759768:-1
position: 1759768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1765418-1765471:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1763857-1764039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1763341-1763399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1762575-1762729:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1762056-1762159:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1761874-1761932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1761494-1761630:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1761289-1761413:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1761087-1761145:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1760622-1760776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1760213-1760319:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1759984-1760097:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1759768-1759812:-1:exon

LOC107603844
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1768399..>1769782)
location: region:1768399-1769782:-1
so has part: feature:1768399-1769782:-1:exon
subclass of: SO_0000010

107603844
type: Gene
SIO_000068: ncbigene

position:1768399:-1
position: 1768399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1769782:-1
position: 1769782
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1768399-1769782:-1:exon

LOC107603844
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107603844
product: uncharacterized protein C15orf39 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300762.1
SIO_010081: LOC107603844
subclass of: SO_0000673
so part of: LOC107603844
location: complement(join(1768399..1768417,1768604..1768637,1769017..>1769782))
location: region:1768399-1769782:-1
so has part: feature:1769017-1769782:-1:exon
so has part: feature:1768604-1768637:-1:exon
so has part: feature:1768399-1768417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1769017-1769782:-1:exon

position:1769017:-1
position: 1769017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1768604-1768637:-1:exon

position:1768604:-1
position: 1768604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1768637:-1
position: 1768637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1768399-1768417:-1:exon

position:1768417:-1
position: 1768417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107603844
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107603844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C15orf39 homolog
translation: PSPPGSTPTLAHPASSPSNPPLPPPGPQLSIIIGPNLPQTLLLKAPPTPVAERVSVVKQVGGVPTQTPSQCFTTLHTSLCDTISGSVSRSSPELLRQWLEKAEPAEELGEMPKSLPKPKNGSKAPNPHKPSNGREIWLAFQDVAGLLTKLLCQLENFKSSCPFPYVVRAGAIFIPIHVVKEKLFPKLPGSFVDQVLQKHKVELRPTTLSEEKHLRDLELKSCTSRMLKLLALKQLREIYPDLLNLHWHSSIQQQLASSSETGQQPSK
SIO_010081: LOC107603844
subclass of: SO_0000673
so part of: LOC107603844
location: complement(join(1768414..1768417,1768604..1768637,1769017..>1769782))
location: region:1768414-1769782:-1
so has part: feature:1769017-1769782:-1:exon
so has part: feature:1768604-1768637:-1:exon
so has part: feature:1768414-1768417:-1:exon

XP_016156248.1
type: Protein
SIO_000068: ncbiprotein

position:1768414:-1
position: 1768414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1769017-1769782:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1768604-1768637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1768414-1768417:-1:exon

LOC101806304
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101806304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1772843..1780179)
location: region:1772843-1780179:-1
so has part: feature:1772843-1780179:-1:exon
subclass of: SO_0000010

101806304
type: Gene
SIO_000068: ncbigene

position:1772843:-1
position: 1772843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1780179:-1
position: 1780179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1772843-1780179:-1:exon

LOC101806304
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101806304
product: uncharacterized protein C15orf39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300763.1
SIO_010081: LOC101806304
subclass of: SO_0000673
so part of: LOC101806304
location: complement(join(1772843..1773680,1776008..1776041,1776481..1777188,1777729..1778542,1778610..1780179))
location: region:1772843-1780179:-1
so has part: feature:1778610-1780179:-1:exon
so has part: feature:1777729-1778542:-1:exon
so has part: feature:1776481-1777188:-1:exon
so has part: feature:1776008-1776041:-1:exon
so has part: feature:1772843-1773680:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1778610-1780179:-1:exon

position:1778610:-1
position: 1778610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1777729-1778542:-1:exon

position:1777729:-1
position: 1777729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778542:-1
position: 1778542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1776481-1777188:-1:exon

position:1776481:-1
position: 1776481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1777188:-1
position: 1777188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1776008-1776041:-1:exon

position:1776008:-1
position: 1776008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776041:-1
position: 1776041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1772843-1773680:-1:exon

position:1773680:-1
position: 1773680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101806304
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101806304
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C15orf39-like
translation: MASERCSEPADPMIFNKLPHPEPATAFLPSKIPATSSPAPQPENHFSYKGSYFACPLQSPEGPEQPLAGWSPAPAYLHHSPSALGQPGPAEEPLLAFLVHPAESPGAGLQPPDSQNSKDRLSQKQLMPRRKLDRARCPLPVKKPLLVKKAAPLAVPTPVYRAPASFLAPRMSLLLGTQAQSLQQRPGVANWTLPPATHPLHPSEPHTTGPCSDHGLTLLPPSLALPSKEQLGSPIALPHCCVTFDKYGPPPSSPFLEASCPTAQSQKKVPELPGLSLDPWPKLQAPDASPVSRERPAMCYPPPPYPLSPHRAGPLYHPPAPTVGEPSALPTFGYVGSREPFASTYLKPQAPRSYFPSPLEPYVQSPAGARLGVVLRDAVPPRDAELPRSVGYPGFALSPGDAAVFHGSFPSTEPGSEQHGADSPRWRAAPRHSSAFQPVCTAEKLSGSSSGLAETFPERGGSWEKLGQGEEEPPYPERRSSSPAPQDFPRGGAGEGNACEVKDPAQELVRPSPSVTPTRRLEELRDTKALSSSPPMPVIHNVFSLAPYQEYLQRAKESNTLLFCRKHLWEHSSPQNTGGSQEPAAPRDVSVVSSLRSGSGAVQSQGESCYPSDPKKPKPEPQELESQGDSPDGVDTEELPPEEMALDLSFKTGLVEAGDTQRPTECVQATMKGEDKEEKEAAGGREGLGEGAQPPMPEADSGGRSNFQSSISFMFQKYKLLPSLLPSTEPPQQDGSPKAPQPTPLPPPGPQLSIIIGPNLPQTLLLKAPPTPVAERVSVVKQVGGVPTQTPSQCFTTLHTSLCDTISGSVSRSSPELLRQWLEKAEPAEELGEMPKSLPKPKNGSKAPNPHKPSNGREIWLAFQDVAGLLTKLLCQLENFKSSCPFPYVVRAGAIFIPIHVVKEKLFPKLPGSFVDQVLQKHKVELRPTTLSEEKHLRDLELKSCTSRMLKLLALKQLREIYPDLLNLHWHSSIQQQLASSSETGQQPSNQLTT
SIO_010081: LOC101806304
subclass of: SO_0000673
so part of: LOC101806304
location: complement(join(1773665..1773680,1776008..1776041,1776481..1777188,1777729..1778542,1778610..1780022))
location: region:1773665-1780022:-1
so has part: feature:1778610-1780022:-1:exon
so has part: feature:1777729-1778542:-1:exon
so has part: feature:1776481-1777188:-1:exon
so has part: feature:1776008-1776041:-1:exon
so has part: feature:1773665-1773680:-1:exon

XP_016156249.1
type: Protein
SIO_000068: ncbiprotein

position:1773665:-1
position: 1773665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1780022:-1
position: 1780022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1778610-1780022:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1777729-1778542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1776481-1777188:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1776008-1776041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1773665-1773680:-1:exon

PPCDC
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: PPCDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1803676..1821171)
location: region:1803676-1821171:-1
so has part: feature:1803676-1821171:-1:exon
subclass of: SO_0000010

101819692
type: Gene
SIO_000068: ncbigene

position:1803676:-1
position: 1803676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1821171:-1
position: 1821171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1803676-1821171:-1:exon

PPCDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: PPCDC
product: phosphopantothenoylcysteine decarboxylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005051558.2
SIO_010081: PPCDC
subclass of: SO_0000673
so part of: PPCDC
location: complement(join(1803676..1807341,1810039..1810207,1813827..1813955,1816233..1816328,1819661..1819825,1820895..1821171))
location: region:1803676-1821171:-1
so has part: feature:1820895-1821171:-1:exon
so has part: feature:1819661-1819825:-1:exon
so has part: feature:1816233-1816328:-1:exon
so has part: feature:1813827-1813955:-1:exon
so has part: feature:1810039-1810207:-1:exon
so has part: feature:1803676-1807341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1820895-1821171:-1:exon

position:1820895:-1
position: 1820895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1819661-1819825:-1:exon

position:1819661:-1
position: 1819661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1819825:-1
position: 1819825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1816233-1816328:-1:exon

position:1816233:-1
position: 1816233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1816328:-1
position: 1816328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1813827-1813955:-1:exon

position:1813827:-1
position: 1813827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1813955:-1
position: 1813955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1810039-1810207:-1:exon

position:1810039:-1
position: 1810039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1810207:-1
position: 1810207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1803676-1807341:-1:exon

position:1807341:-1
position: 1807341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPCDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: PPCDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphopantothenoylcysteine decarboxylase
translation: MEPISLPAPGIPAGNSSSEARGKFRVLVGVTGSVAALKLPLLVAELLKIPGLEVKVVTTERAKHFYNAQEIPVTLYGDEEEWQLWKGRSDPVLHIELRRWADLMVVAPLDANTLAKVANGICDNLLTCVIRAWDLSKPLLFCPAMNTAMWEHPITARQVEQLKAFGYTEIPCVVKKLVCGDEGRGAMAEVWTIVERVKRILEEQDVPRQS
SIO_010081: PPCDC
subclass of: SO_0000673
so part of: PPCDC
location: complement(join(1807256..1807341,1810039..1810207,1813827..1813955,1816233..1816328,1819661..1819813))
location: region:1807256-1819813:-1
so has part: feature:1819661-1819813:-1:exon
so has part: feature:1816233-1816328:-1:exon
so has part: feature:1813827-1813955:-1:exon
so has part: feature:1810039-1810207:-1:exon
so has part: feature:1807256-1807341:-1:exon

XP_005051615.1
type: Protein
SIO_000068: ncbiprotein

position:1807256:-1
position: 1807256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1819813:-1
position: 1819813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1819661-1819813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1816233-1816328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1813827-1813955:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1810039-1810207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1807256-1807341:-1:exon

SCAMP5
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SCAMP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1824856..1830070)
location: region:1824856-1830070:-1
so has part: feature:1824856-1830070:-1:exon
subclass of: SO_0000010

101806501
type: Gene
SIO_000068: ncbigene

position:1824856:-1
position: 1824856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1830070:-1
position: 1830070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1824856-1830070:-1:exon

SCAMP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SCAMP5
product: secretory carrier membrane protein 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_016300987.1
SIO_010081: SCAMP5
subclass of: SO_0000673
so part of: SCAMP5
location: complement(join(1824856..1825115,1825207..1825324,1825485..1825586,1826243..1826399,1828084..1828212,1828458..1828534,1830027..1830070))
location: region:1824856-1830070:-1
so has part: feature:1830027-1830070:-1:exon
so has part: feature:1828458-1828534:-1:exon
so has part: feature:1828084-1828212:-1:exon
so has part: feature:1826243-1826399:-1:exon
so has part: feature:1825485-1825586:-1:exon
so has part: feature:1825207-1825324:-1:exon
so has part: feature:1824856-1825115:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1830027-1830070:-1:exon

position:1830027:-1
position: 1830027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1828458-1828534:-1:exon

position:1828458:-1
position: 1828458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828534:-1
position: 1828534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1828084-1828212:-1:exon

position:1828084:-1
position: 1828084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828212:-1
position: 1828212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1826243-1826399:-1:exon

position:1826243:-1
position: 1826243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826399:-1
position: 1826399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1825485-1825586:-1:exon

position:1825485:-1
position: 1825485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825586:-1
position: 1825586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1825207-1825324:-1:exon

position:1825207:-1
position: 1825207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1825324:-1
position: 1825324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1824856-1825115:-1:exon

position:1825115:-1
position: 1825115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCAMP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SCAMP5
product: secretory carrier membrane protein 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_005051575.2
SIO_010081: SCAMP5
subclass of: SO_0000673
so part of: SCAMP5
location: complement(join(1824856..1825115,1825207..1825324,1825485..1825586,1826243..1826399,1828084..1828212,1828458..1829326))
location: region:1824856-1829326:-1
so has part: feature:1828458-1829326:-1:exon
so has part: feature:1828084-1828212:-1:exon
so has part: feature:1826243-1826399:-1:exon
so has part: feature:1825485-1825586:-1:exon
so has part: feature:1825207-1825324:-1:exon
so has part: feature:1824856-1825115:-1:exon

position:1829326:-1
position: 1829326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1828458-1829326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828084-1828212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826243-1826399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825485-1825586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1825207-1825324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1824856-1825115:-1:exon

SCAMP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SCAMP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory carrier-associated membrane protein 5
translation: MAEKVNNFPPLPKFIPLKPCFYQDFDAEIPPQHRTMAKRLYYLWMLNSITLAVNLVGCLAWLIGGGGAVNFGLAILWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISIIQAVGIPGWGVCGWIAAISFFGTNVGSAVVMLIPTVLFTAMAVFSFIALTMVHKFYRGSGGSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMMQHETQYSATPNYTYSNEM
SIO_010081: SCAMP5
subclass of: SO_0000673
so part of: SCAMP5
location: complement(join(1824921..1825115,1825207..1825324,1825485..1825586,1826243..1826399,1828084..1828212,1828458..1828464))
location: region:1824921-1828464:-1
so has part: feature:1828458-1828464:-1:exon
so has part: feature:1828084-1828212:-1:exon
so has part: feature:1826243-1826399:-1:exon
so has part: feature:1825485-1825586:-1:exon
so has part: feature:1825207-1825324:-1:exon
so has part: feature:1824921-1825115:-1:exon

XP_016156473.1
type: Protein
SIO_000068: ncbiprotein

position:1824921:-1
position: 1824921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1828464:-1
position: 1828464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1828458-1828464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828084-1828212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826243-1826399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825485-1825586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1825207-1825324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1824921-1825115:-1:exon

SCAMP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SCAMP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory carrier-associated membrane protein 5
translation: MAEKVNNFPPLPKFIPLKPCFYQDFDAEIPPQHRTMAKRLYYLWMLNSITLAVNLVGCLAWLIGGGGAVNFGLAILWLILFTPCSYVCWFRPIYKAFKTDSSFSFMAFFFTFMAQLVISIIQAVGIPGWGVCGWIAAISFFGTNVGSAVVMLIPTVLFTAMAVFSFIALTMVHKFYRGSGGSFSKAQEEWTTGAWKNPHVQQAAQNAAMGAAQGAMMQHETQYSATPNYTYSNEM
SIO_010081: SCAMP5
subclass of: SO_0000673
so part of: SCAMP5
location: complement(join(1824921..1825115,1825207..1825324,1825485..1825586,1826243..1826399,1828084..1828212,1828458..1828464))
location: region:1824921-1828464:-1
so has part: feature:1828458-1828464:-1:exon
so has part: feature:1828084-1828212:-1:exon
so has part: feature:1826243-1826399:-1:exon
so has part: feature:1825485-1825586:-1:exon
so has part: feature:1825207-1825324:-1:exon
so has part: feature:1824921-1825115:-1:exon

XP_005051632.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1828458-1828464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1828084-1828212:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1826243-1826399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1825485-1825586:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1825207-1825324:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1824921-1825115:-1:exon

RPP25
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: RPP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1835628..1837777
location: region:1835628-1837777:1
so has part: feature:1835628-1837777:1:exon
subclass of: SO_0000010

101820024
type: Gene
SIO_000068: ncbigene

position:1835628:1
position: 1835628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1837777:1
position: 1837777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1835628-1837777:1:exon

RPP25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: RPP25
product: ribonuclease P/MRP subunit p25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051559.2
SIO_010081: RPP25
subclass of: SO_0000673
so part of: RPP25
location: 1835628..1837777
location: region:1835628-1837777:1
so has part: feature:1835628-1837777:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1835628-1837777:1:exon

RPP25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: RPP25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease P protein subunit p25
translation: MAAEGGRAKPPALSRMENFRKVRTSEEEMPLPFPDLPPDVVEMKVKEGSKIRNLMNFAMAQMELKGRRQIVFSGCGRAVTKTITCVEIMKRKLGGLHQVTKVRYKTVLEVWESQEPPPDGPAQNLTVHKNVPSICILLSRDPLDPNQAGYQPPEHRREAGEDTAGSSPKGLKRPLPPPCEELLPKKLQVQVADSPRGSGSTAGQLDH
SIO_010081: RPP25
subclass of: SO_0000673
so part of: RPP25
location: 1836395..1837018
location: region:1836395-1837018:1
so has part: feature:1836395-1837018:1:exon

XP_005051616.1
type: Protein
SIO_000068: ncbiprotein

position:1836395:1
position: 1836395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1837018:1
position: 1837018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1836395-1837018:1:exon

LOC101806695
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101806695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1841428..1844948
location: region:1841428-1844948:1
so has part: feature:1841428-1844948:1:exon
subclass of: SO_0000010

101806695
type: Gene
SIO_000068: ncbigene

position:1841428:1
position: 1841428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1844948:1
position: 1844948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841428-1844948:1:exon

LOC101806695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101806695
product: cytochrome c oxidase subunit 5A, mitochondrial
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_016301027.1
SIO_010081: LOC101806695
subclass of: SO_0000673
so part of: LOC101806695
location: join(1841428..1841509,1842910..1843026,1843612..1843733,1844060..1844182,1844783..1844948)
location: region:1841428-1844948:1
so has part: feature:1841428-1841509:1:exon
so has part: feature:1842910-1843026:1:exon
so has part: feature:1843612-1843733:1:exon
so has part: feature:1844060-1844182:1:exon
so has part: feature:1844783-1844948:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1841428-1841509:1:exon

position:1841509:1
position: 1841509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1842910-1843026:1:exon

position:1842910:1
position: 1842910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843026:1
position: 1843026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1843612-1843733:1:exon

position:1843612:1
position: 1843612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1843733:1
position: 1843733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1844060-1844182:1:exon

position:1844060:1
position: 1844060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1844182:1
position: 1844182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1844783-1844948:1:exon

position:1844783:1
position: 1844783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101806695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101806695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 5A, mitochondrial
translation: MWKRSTAAIGKHTLEIQSFHSPAVLPARCYSHGSQESDEEFDARWVTYFNKPDIDAWELRKGINTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLSELGISTPEELGLDKA
SIO_010081: LOC101806695
subclass of: SO_0000673
so part of: LOC101806695
location: join(1841443..1841509,1842910..1843026,1843612..1843733,1844060..1844173)
location: region:1841443-1844173:1
so has part: feature:1841443-1841509:1:exon
so has part: feature:1842910-1843026:1:exon
so has part: feature:1843612-1843733:1:exon
so has part: feature:1844060-1844173:1:exon

XP_016156513.1
type: Protein
SIO_000068: ncbiprotein

position:1841443:1
position: 1841443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1844173:1
position: 1844173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841443-1841509:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1842910-1843026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1843612-1843733:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1844060-1844173:1:exon

FAM219B
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: FAM219B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1847699..1850678
location: region:1847699-1850678:1
so has part: feature:1847699-1850678:1:exon
subclass of: SO_0000010

101806894
type: Gene
SIO_000068: ncbigene

position:1847699:1
position: 1847699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1850678:1
position: 1850678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1847699-1850678:1:exon

FAM219B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: FAM219B
product: family with sequence similarity 219 member B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051577.2
SIO_010081: FAM219B
subclass of: SO_0000673
so part of: FAM219B
location: join(1847699..1847731,1848617..1848719,1848978..1849062,1849413..1849490,1849730..1849778,1849929..1850678)
location: region:1847699-1850678:1
so has part: feature:1847699-1847731:1:exon
so has part: feature:1848617-1848719:1:exon
so has part: feature:1848978-1849062:1:exon
so has part: feature:1849413-1849490:1:exon
so has part: feature:1849730-1849778:1:exon
so has part: feature:1849929-1850678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1847699-1847731:1:exon

position:1847731:1
position: 1847731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1848617-1848719:1:exon

position:1848617:1
position: 1848617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1848719:1
position: 1848719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1848978-1849062:1:exon

position:1848978:1
position: 1848978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849062:1
position: 1849062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1849413-1849490:1:exon

position:1849413:1
position: 1849413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849490:1
position: 1849490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1849730-1849778:1:exon

position:1849730:1
position: 1849730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1849778:1
position: 1849778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1849929-1850678:1:exon

position:1849929:1
position: 1849929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM219B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: FAM219B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM219B
translation: MGCVHTGYGAGLVWAEKKRLNKGTDVVEKRGPYIMSKPPSIQAKLKRQRELAKAALRRQGLLGAPTALKPTPKRSVKFNKGYTALSQTADENLVSLDSDSDGEPGSRCSSGYSSAEQVTQDLSRQLLQDGYHLDEVPDDEDLDLIPPKPAASSSCPCCFGESLSCVIQ
SIO_010081: FAM219B
subclass of: SO_0000673
so part of: FAM219B
location: join(1847699..1847731,1848617..1848719,1848978..1849062,1849413..1849490,1849730..1849778,1849929..1850087)
location: region:1847699-1850087:1
so has part: feature:1847699-1847731:1:exon
so has part: feature:1848617-1848719:1:exon
so has part: feature:1848978-1849062:1:exon
so has part: feature:1849413-1849490:1:exon
so has part: feature:1849730-1849778:1:exon
so has part: feature:1849929-1850087:1:exon

XP_005051634.1
type: Protein
SIO_000068: ncbiprotein

position:1850087:1
position: 1850087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1847699-1847731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1848617-1848719:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1848978-1849062:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1849413-1849490:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1849730-1849778:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1849929-1850087:1:exon

MPI
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: MPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1851020..1855379)
location: region:1851020-1855379:-1
so has part: feature:1851020-1855379:-1:exon
subclass of: SO_0000010

101807091
type: Gene
SIO_000068: ncbigene

position:1851020:-1
position: 1851020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855379:-1
position: 1855379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1851020-1855379:-1:exon

MPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: MPI
product: mannose phosphate isomerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_016300903.1
SIO_010081: MPI
subclass of: SO_0000673
so part of: MPI
location: complement(join(1851020..1851347,1851690..1851898,1852005..1852178,1852282..1852464,1853161..1853302,1853380..1853580,1853867..1853994,1855273..1855379))
location: region:1851020-1855379:-1
so has part: feature:1855273-1855379:-1:exon
so has part: feature:1853867-1853994:-1:exon
so has part: feature:1853380-1853580:-1:exon
so has part: feature:1853161-1853302:-1:exon
so has part: feature:1852282-1852464:-1:exon
so has part: feature:1852005-1852178:-1:exon
so has part: feature:1851690-1851898:-1:exon
so has part: feature:1851020-1851347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1855273-1855379:-1:exon

position:1855273:-1
position: 1855273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1853867-1853994:-1:exon

position:1853867:-1
position: 1853867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853994:-1
position: 1853994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1853380-1853580:-1:exon

position:1853380:-1
position: 1853380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853580:-1
position: 1853580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1853161-1853302:-1:exon

position:1853161:-1
position: 1853161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853302:-1
position: 1853302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1852282-1852464:-1:exon

position:1852282:-1
position: 1852282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852464:-1
position: 1852464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1852005-1852178:-1:exon

position:1852005:-1
position: 1852005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852178:-1
position: 1852178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1851690-1851898:-1:exon

position:1851690:-1
position: 1851690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1851898:-1
position: 1851898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1851020-1851347:-1:exon

position:1851347:-1
position: 1851347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: MPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannose-6-phosphate isomerase
translation: MGAHPRGDALIRDNRIPQKTLGQWIADNPACLGAKVKDAFQGQLPFLFKVLSVNTALSVQAHPNKELAAKLHAQFPEHYPDANHKPEMAIALTPFEGMCGFRPVEEIVSFLQNVPELRALIGEVAAEQLERSGSDDPRGVSAALRVCFTRLMKSEKKFFVDQLNMLVKRISQEAAEGKDTSGSNGDLLLQLHSQYPGDIGCFTIYFLNLVRLEPGEAMFLGANEPHAYLHGDCVEIMACSDNTVRAGLTPKFIDVLTLCEMLNYTPAPSSSKIFPAAQSQLDPHVYLYDPPVPDFTIMRIEIPASIKLYLISAMDSASILLVIQGTAVGTSTAAASEMSLQRGSVLFISANESISLHLSSPGMLLFRACCLL
SIO_010081: MPI
subclass of: SO_0000673
so part of: MPI
location: complement(join(1851132..1851347,1851690..1851898,1852005..1852178,1852282..1852464,1853161..1853302,1853380..1853574))
location: region:1851132-1853574:-1
so has part: feature:1853380-1853574:-1:exon
so has part: feature:1853161-1853302:-1:exon
so has part: feature:1852282-1852464:-1:exon
so has part: feature:1852005-1852178:-1:exon
so has part: feature:1851690-1851898:-1:exon
so has part: feature:1851132-1851347:-1:exon

XP_016156389.1
type: Protein
SIO_000068: ncbiprotein

position:1851132:-1
position: 1851132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853574:-1
position: 1853574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1853380-1853574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1853161-1853302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1852282-1852464:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1852005-1852178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1851690-1851898:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1851132-1851347:-1:exon

SCAMP2
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: SCAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1859970..1868606
location: region:1859970-1868606:1
so has part: feature:1859970-1868606:1:exon
subclass of: SO_0000010

101820230
type: Gene
SIO_000068: ncbigene

position:1859970:1
position: 1859970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1868606:1
position: 1868606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1859970-1868606:1:exon

SCAMP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: SCAMP2
product: secretory carrier membrane protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005051560.2
SIO_010081: SCAMP2
subclass of: SO_0000673
so part of: SCAMP2
location: join(1859970..1860098,1860538..1860627,1862211..1862328,1862965..1863093,1863520..1863679,1864185..1864286,1866126..1866243,1867231..1868606)
location: region:1859970-1868606:1
so has part: feature:1859970-1860098:1:exon
so has part: feature:1860538-1860627:1:exon
so has part: feature:1862211-1862328:1:exon
so has part: feature:1862965-1863093:1:exon
so has part: feature:1863520-1863679:1:exon
so has part: feature:1864185-1864286:1:exon
so has part: feature:1866126-1866243:1:exon
so has part: feature:1867231-1868606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1859970-1860098:1:exon

position:1860098:1
position: 1860098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1860538-1860627:1:exon

position:1860538:1
position: 1860538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860627:1
position: 1860627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1862211-1862328:1:exon

position:1862211:1
position: 1862211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862328:1
position: 1862328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1862965-1863093:1:exon

position:1862965:1
position: 1862965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863093:1
position: 1863093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1863520-1863679:1:exon

position:1863520:1
position: 1863520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863679:1
position: 1863679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1864185-1864286:1:exon

position:1864185:1
position: 1864185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864286:1
position: 1864286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1866126-1866243:1:exon

position:1866126:1
position: 1866126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1866243:1
position: 1866243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1867231-1868606:1:exon

position:1867231:1
position: 1867231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCAMP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: SCAMP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory carrier-associated membrane protein 2
translation: MLIHPCALSLQDPSVTQLTNTSQSGLDEFNPFSESSQLTNAARTTPAAQPSGHSQPAVLQTSVEPTPQAVAAAAQAGLLQQQAELERKAAELEKKERELQSHAASIDPRQNNWPPLPRRCPIKPCFYQDFSADIPADYQRICKMLYYLWMLHSITLLLNLLACLAWFTADTSRGVDFGLSILWLILFTPCAFLCWYRPIYKAFRSDSSFSFFVFFFVFFCQIAIYIIQAVGIPGWGDSGWIAALSVVGGHMAVAVIMMVVAAFFTLCAVLSLFLLKQVHSLYRRTGASFQRAQEEFSQGILTNRSFQNAAAGVASSAAQNAFRGN
SIO_010081: SCAMP2
subclass of: SO_0000673
so part of: SCAMP2
location: join(1859985..1860098,1860538..1860627,1862211..1862328,1862965..1863093,1863520..1863679,1864185..1864286,1866126..1866243,1867231..1867377)
location: region:1859985-1867377:1
so has part: feature:1859985-1860098:1:exon
so has part: feature:1860538-1860627:1:exon
so has part: feature:1862211-1862328:1:exon
so has part: feature:1862965-1863093:1:exon
so has part: feature:1863520-1863679:1:exon
so has part: feature:1864185-1864286:1:exon
so has part: feature:1866126-1866243:1:exon
so has part: feature:1867231-1867377:1:exon

XP_005051617.1
type: Protein
SIO_000068: ncbiprotein

position:1859985:1
position: 1859985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867377:1
position: 1867377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1859985-1860098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1860538-1860627:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1862211-1862328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1862965-1863093:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1863520-1863679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1864185-1864286:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1866126-1866243:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1867231-1867377:1:exon

ULK3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: ULK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1869385..1872663
location: region:1869385-1872663:1
so has part: feature:1869385-1872663:1:exon
subclass of: SO_0000010

101820423
type: Gene
SIO_000068: ncbigene

position:1869385:1
position: 1869385
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1872663:1
position: 1872663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869385-1872663:1:exon

ULK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: ULK3
product: unc-51 like kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_016300904.1
SIO_010081: ULK3
subclass of: SO_0000673
so part of: ULK3
location: join(<1869385..1869603,1869800..1869920,1870001..1870105,1870186..1870329,1870463..1870545,1870620..1870775,1870853..1870958,1871074..1871114,1871454..1871556,1871668..1871732,1871860..1871938,1872073..1872113,1872194..1872241,1872316..1872370,1872542..1872663)
location: region:1869385-1872663:1
so has part: feature:1869385-1869603:1:exon
so has part: feature:1869800-1869920:1:exon
so has part: feature:1870001-1870105:1:exon
so has part: feature:1870186-1870329:1:exon
so has part: feature:1870463-1870545:1:exon
so has part: feature:1870620-1870775:1:exon
so has part: feature:1870853-1870958:1:exon
so has part: feature:1871074-1871114:1:exon
so has part: feature:1871454-1871556:1:exon
so has part: feature:1871668-1871732:1:exon
so has part: feature:1871860-1871938:1:exon
so has part: feature:1872073-1872113:1:exon
so has part: feature:1872194-1872241:1:exon
so has part: feature:1872316-1872370:1:exon
so has part: feature:1872542-1872663:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1869385-1869603:1:exon

position:1869603:1
position: 1869603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1869800-1869920:1:exon

position:1869800:1
position: 1869800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1869920:1
position: 1869920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1870001-1870105:1:exon

position:1870001:1
position: 1870001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870105:1
position: 1870105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1870186-1870329:1:exon

position:1870186:1
position: 1870186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870329:1
position: 1870329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1870463-1870545:1:exon

position:1870463:1
position: 1870463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870545:1
position: 1870545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1870620-1870775:1:exon

position:1870620:1
position: 1870620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870775:1
position: 1870775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1870853-1870958:1:exon

position:1870853:1
position: 1870853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1870958:1
position: 1870958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1871074-1871114:1:exon

position:1871074:1
position: 1871074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871114:1
position: 1871114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1871454-1871556:1:exon

position:1871454:1
position: 1871454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871556:1
position: 1871556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1871668-1871732:1:exon

position:1871668:1
position: 1871668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871732:1
position: 1871732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1871860-1871938:1:exon

position:1871860:1
position: 1871860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871938:1
position: 1871938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1872073-1872113:1:exon

position:1872073:1
position: 1872073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872113:1
position: 1872113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1872194-1872241:1:exon

position:1872194:1
position: 1872194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872241:1
position: 1872241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1872316-1872370:1:exon

position:1872316:1
position: 1872316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1872370:1
position: 1872370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1872542-1872663:1:exon

position:1872542:1
position: 1872542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ULK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: ULK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase ULK3
translation: SLPFPSLPSRRALWVKGSSLVPPPRQRDTREVVAIKCVNKRSLNRASVENLLTEIEILKTIRHPNIVELKDFQWDGDHIYLIMEFCAGGDLSRFIRTRRALPETVARVFLQQLACALKFLHDRNISHLDLKPQNILLSAPESPQLKLADFGFAQYMSPWDEKHVLRGSPLYMAPEMVCRQHYDARADLWSVGVILYEALFGKPPFASRSFAELEEKIRSDRAVELPSWPQLSLECRDLLAQLLERDPRKRISFECFFAHPFVDMEHIPGPESLGKATDLVVEAVRKDQEGDAKAAFSLYRKALEYFVPALHYESDARRKEAIRAKVRQYISRAEELKVLVTSSNKNLLEKGNPARELLKEMAKDKPRLCAALEVASAAIAKEEEGRDDSDALELYQQSLGELLLLLAAEPAGRRRELLHAEIQTLMARAEYLKDQIKMREAQSMGKEALAESVRSACTLQ
SIO_010081: ULK3
subclass of: SO_0000673
so part of: ULK3
location: join(<1869385..1869603,1869800..1869920,1870001..1870105,1870186..1870329,1870463..1870545,1870620..1870775,1870853..1870958,1871074..1871114,1871454..1871556,1871668..1871732,1871860..1871938,1872073..1872113,1872194..1872241,1872316..1872370,1872542..1872558)
location: region:1869385-1872558:1
so has part: feature:1869385-1869603:1:exon
so has part: feature:1869800-1869920:1:exon
so has part: feature:1870001-1870105:1:exon
so has part: feature:1870186-1870329:1:exon
so has part: feature:1870463-1870545:1:exon
so has part: feature:1870620-1870775:1:exon
so has part: feature:1870853-1870958:1:exon
so has part: feature:1871074-1871114:1:exon
so has part: feature:1871454-1871556:1:exon
so has part: feature:1871668-1871732:1:exon
so has part: feature:1871860-1871938:1:exon
so has part: feature:1872073-1872113:1:exon
so has part: feature:1872194-1872241:1:exon
so has part: feature:1872316-1872370:1:exon
so has part: feature:1872542-1872558:1:exon

XP_016156390.1
type: Protein
SIO_000068: ncbiprotein

position:1872558:1
position: 1872558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869385-1869603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869800-1869920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1870001-1870105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1870186-1870329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1870463-1870545:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1870620-1870775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1870853-1870958:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1871074-1871114:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1871454-1871556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1871668-1871732:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1871860-1871938:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1872073-1872113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1872194-1872241:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1872316-1872370:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1872542-1872558:1:exon

CPLX3
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CPLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1880486..1883347)
location: region:1880486-1883347:-1
so has part: feature:1880486-1883347:-1:exon
subclass of: SO_0000010

101820622
type: Gene
SIO_000068: ncbigene

position:1880486:-1
position: 1880486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883347:-1
position: 1883347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1880486-1883347:-1:exon

CPLX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CPLX3
product: complexin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005051562.1
SIO_010081: CPLX3
subclass of: SO_0000673
so part of: CPLX3
location: complement(join(1880486..1881591,1882789..1882876,1883186..1883347))
location: region:1880486-1883347:-1
so has part: feature:1883186-1883347:-1:exon
so has part: feature:1882789-1882876:-1:exon
so has part: feature:1880486-1881591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1883186-1883347:-1:exon

position:1883186:-1
position: 1883186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1882789-1882876:-1:exon

position:1882789:-1
position: 1882789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1882876:-1
position: 1882876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1880486-1881591:-1:exon

position:1881591:-1
position: 1881591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CPLX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CPLX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complexin-3
translation: MAFMVKSMVGGQLKNLTGGLGGEEKSESEKSPAEAQGMTREEYEEYQRQLVEEKMERDAQFAQRKAERATVRSHFRDKYRLPKNETDDNQIQLVGGDVELPKELAKMIEQDNEEEEEKNSVIGQLSNIQNLDLDSLKDKASATLEDLKQSAEKCSVM
SIO_010081: CPLX3
subclass of: SO_0000673
so part of: CPLX3
location: complement(join(1881367..1881591,1882789..1882876,1883186..1883346))
location: region:1881367-1883346:-1
so has part: feature:1883186-1883346:-1:exon
so has part: feature:1882789-1882876:-1:exon
so has part: feature:1881367-1881591:-1:exon

XP_005051619.1
type: Protein
SIO_000068: ncbiprotein

position:1881367:-1
position: 1881367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883346:-1
position: 1883346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1883186-1883346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1882789-1882876:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1881367-1881591:-1:exon

CSK
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: CSK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1894425..1900389)
location: region:1894425-1900389:-1
so has part: feature:1894425-1900389:-1:exon
subclass of: SO_0000010

101820823
type: Gene
SIO_000068: ncbigene

position:1894425:-1
position: 1894425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900389:-1
position: 1900389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1894425-1900389:-1:exon

CSK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: CSK
product: c-src tyrosine kinase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_005051563.2
SIO_010081: CSK
subclass of: SO_0000673
so part of: CSK
location: complement(join(1894425..1894848,1894944..1895030,1895163..1895358,1895468..1895541,1897054..1897144,1897267..1897366,1897526..1897591,1898037..1898130,1898321..1898540,1899080..1899192,1899963..1900076,1900240..1900389))
location: region:1894425-1900389:-1
so has part: feature:1900240-1900389:-1:exon
so has part: feature:1899963-1900076:-1:exon
so has part: feature:1899080-1899192:-1:exon
so has part: feature:1898321-1898540:-1:exon
so has part: feature:1898037-1898130:-1:exon
so has part: feature:1897526-1897591:-1:exon
so has part: feature:1897267-1897366:-1:exon
so has part: feature:1897054-1897144:-1:exon
so has part: feature:1895468-1895541:-1:exon
so has part: feature:1895163-1895358:-1:exon
so has part: feature:1894944-1895030:-1:exon
so has part: feature:1894425-1894848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1900240-1900389:-1:exon

position:1900240:-1
position: 1900240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1899963-1900076:-1:exon

position:1899963:-1
position: 1899963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900076:-1
position: 1900076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1899080-1899192:-1:exon

position:1899080:-1
position: 1899080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1899192:-1
position: 1899192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1898321-1898540:-1:exon

position:1898321:-1
position: 1898321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898540:-1
position: 1898540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1898037-1898130:-1:exon

position:1898037:-1
position: 1898037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1898130:-1
position: 1898130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1897526-1897591:-1:exon

position:1897526:-1
position: 1897526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897591:-1
position: 1897591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1897267-1897366:-1:exon

position:1897267:-1
position: 1897267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897366:-1
position: 1897366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1897054-1897144:-1:exon

position:1897054:-1
position: 1897054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1897144:-1
position: 1897144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1895468-1895541:-1:exon

position:1895468:-1
position: 1895468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895541:-1
position: 1895541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1895163-1895358:-1:exon

position:1895163:-1
position: 1895163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895358:-1
position: 1895358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1894944-1895030:-1:exon

position:1894944:-1
position: 1894944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895030:-1
position: 1895030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1894425-1894848:-1:exon

position:1894848:-1
position: 1894848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: CSK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase CSK
translation: MSGMQAVWPSGTECIAKYNFHGTAEQDLPFSKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGVKAGIKLSLMPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIIYSSSKLSIDEEVYFENLMQLVEHYTTDADGLCTRLIKPKLMEGTVAAQDEFSRSGWALNMKDLKLLQIIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKSGLYIVTEYMAKGSLVDYLRSRGRSVLGADCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNIAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPAVVYEVMKKCWTLDPGHRPSFHQLREQLVHIKEKELYL
SIO_010081: CSK
subclass of: SO_0000673
so part of: CSK
location: complement(join(1894666..1894848,1894944..1895030,1895163..1895358,1895468..1895541,1897054..1897144,1897267..1897366,1897526..1897591,1898037..1898130,1898321..1898540,1899080..1899192,1899963..1900076,1900240..1900254))
location: region:1894666-1900254:-1
so has part: feature:1900240-1900254:-1:exon
so has part: feature:1899963-1900076:-1:exon
so has part: feature:1899080-1899192:-1:exon
so has part: feature:1898321-1898540:-1:exon
so has part: feature:1898037-1898130:-1:exon
so has part: feature:1897526-1897591:-1:exon
so has part: feature:1897267-1897366:-1:exon
so has part: feature:1897054-1897144:-1:exon
so has part: feature:1895468-1895541:-1:exon
so has part: feature:1895163-1895358:-1:exon
so has part: feature:1894944-1895030:-1:exon
so has part: feature:1894666-1894848:-1:exon

XP_005051620.1
type: Protein
SIO_000068: ncbiprotein

position:1894666:-1
position: 1894666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900254:-1
position: 1900254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1900240-1900254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1899963-1900076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1899080-1899192:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1898321-1898540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1898037-1898130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1897526-1897591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1897267-1897366:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1897054-1897144:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1895468-1895541:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1895163-1895358:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1894944-1895030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1894666-1894848:-1:exon

LOC107603845
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC107603845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1905769..1905984
location: region:1905769-1905984:1
so has part: feature:1905769-1905984:1:exon
subclass of: SO_0000010

107603845
type: Gene
SIO_000068: ncbigene

position:1905769:1
position: 1905769
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1905984:1
position: 1905984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1905769-1905984:1:exon

LOC107603845
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC107603845
product: nacrein-like protein C1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
transcript id: XM_016300764.1
SIO_010081: LOC107603845
subclass of: SO_0000673
so part of: LOC107603845
location: join(<1905769..1905824,1905879..1905984)
location: region:1905769-1905984:1
so has part: feature:1905769-1905824:1:exon
so has part: feature:1905879-1905984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1905769-1905824:1:exon

position:1905824:1
position: 1905824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1905879-1905984:1:exon

position:1905879:1
position: 1905879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107603845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC107603845
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nacrein-like protein C1
translation: SGDNGDSGDNGDSGDNGDSGDEGDNGDNGDGGIAGITGIAGMKGTTGITGMEG
SIO_010081: LOC107603845
subclass of: SO_0000673
so part of: LOC107603845
location: join(<1905769..1905824,1905879..1905984)
location: region:1905769-1905984:1
so has part: feature:1905769-1905824:1:exon
so has part: feature:1905879-1905984:1:exon

XP_016156250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1905769-1905824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1905879-1905984:1:exon

LOC101807643
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101807643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1913138..1918218)
location: region:1913138-1918218:-1
so has part: feature:1913138-1918218:-1:exon
subclass of: SO_0000010

101807643
type: Gene
SIO_000068: ncbigene

position:1913138:-1
position: 1913138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1918218:-1
position: 1918218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1913138-1918218:-1:exon

LOC101807643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101807643
product: cytochrome P450 1A5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051580.2
SIO_010081: LOC101807643
subclass of: SO_0000673
so part of: LOC101807643
location: complement(join(1913138..1913613,1913755..1913841,1914020..1914143,1914230..1914319,1914760..1914886,1915418..1915714,1917355..1917492,1918058..1918218))
location: region:1913138-1918218:-1
so has part: feature:1918058-1918218:-1:exon
so has part: feature:1917355-1917492:-1:exon
so has part: feature:1915418-1915714:-1:exon
so has part: feature:1914760-1914886:-1:exon
so has part: feature:1914230-1914319:-1:exon
so has part: feature:1914020-1914143:-1:exon
so has part: feature:1913755-1913841:-1:exon
so has part: feature:1913138-1913613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1918058-1918218:-1:exon

position:1918058:-1
position: 1918058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1917355-1917492:-1:exon

position:1917355:-1
position: 1917355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1917492:-1
position: 1917492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1915418-1915714:-1:exon

position:1915418:-1
position: 1915418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1915714:-1
position: 1915714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1914760-1914886:-1:exon

position:1914760:-1
position: 1914760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914886:-1
position: 1914886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1914230-1914319:-1:exon

position:1914230:-1
position: 1914230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914319:-1
position: 1914319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1914020-1914143:-1:exon

position:1914020:-1
position: 1914020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914143:-1
position: 1914143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1913755-1913841:-1:exon

position:1913755:-1
position: 1913755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1913841:-1
position: 1913841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1913138-1913613:-1:exon

position:1913613:-1
position: 1913613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101807643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59894
gene: LOC101807643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 1A5-like
translation: MLKAAMRLVASPGALSATEVLLAAAALCLVLALLQWLQQQQQVMEQEKRFEPYRYLVVSVANVICAMCFGKRYEHDDQELLSLVNSAEKFTDVAAAGNPADFIPVLRYLPSRSMELFLDFNRCLLSFLQRRVKEHYKTYDENNIRDITDSLIEQCLDKKLGTTTATQIPKEKIVNLVNDLFGAGFDTITTALSWSLMYLVTYPNTQRRIQEELDRTIGRERRPRLSDQGKLPYLESFILEMFRHSCFVPLAIPHSTTKDTALNGFYIPKDRCVFINQWQVNHDEKLWKDPETFNPERFLSADGTKVNREDGEKVLVFGLGKRRCIGENIARGQVFLFLATLLQQLEFSVCQGSRVDMTPLYGLTLKHKRCEHFQARQRFPTKGRS
SIO_010081: LOC101807643
subclass of: SO_0000673
so part of: LOC101807643
location: complement(join(1913307..1913613,1913755..1913841,1914020..1914143,1914230..1914319,1914760..1914886,1915418..1915714,1917355..1917480))
location: region:1913307-1917480:-1
so has part: feature:1917355-1917480:-1:exon
so has part: feature:1915418-1915714:-1:exon
so has part: feature:1914760-1914886:-1:exon
so has part: feature:1914230-1914319:-1:exon
so has part: feature:1914020-1914143:-1:exon
so has part: feature:1913755-1913841:-1:exon
so has part: feature:1913307-1913613:-1:exon

XP_005051637.1
type: Protein
SIO_000068: ncbiprotein

position:1913307:-1
position: 1913307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1917480:-1
position: 1917480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1917355-1917480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1915418-1915714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1914760-1914886:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1914230-1914319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1914020-1914143:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1913755-1913841:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1913307-1913613:-1:exon

LOC101807838
type: Gene
subclass of: SO_0000704
RO_0002162: 59894
gene: LOC101807838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1923051..1937666
location: region:1923051-1937666:1
so has part: feature:1923051-1937666:1:exon
subclass of: SO_0000010

101807838
type: Gene
SIO_000068: ncbigene

position:1923051:1
position: 1923051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1937666:1
position: 1937666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1923051-1937666:1:exon

LOC101807838
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59894
gene: LOC101807838
product: cytochrome P450 1A4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005051581.2
SIO_010081: LOC101807838
subclass of: SO_0000673
so part of: LOC101807838
location: join(1923051..1923077,1932473..1932520,1933894..1934009,1934050..1934824,1934972..1935098,1935324..1935413,1935501..1935624,1936046..1936132,1937018..1937666)
location: region:1923051-1937666:1
so has part: feature:1923051-1923077:1:exon
so has part: feature:1932473-1932520:1:exon
so has part: feature:1933894-1934009:1:exon
so has part: feature:1934050-1934824:1:exon
so has part: feature:1934972-1935098:1:exon
so has part: feature:1935324-1935413:1:exon
so has part: feature:1935501-1935624:1:exon
so has part: feature:1936046-1936132:1:exon
so has part: feature:1937018-1937666:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1923051-1923077:1:exon

position:1923077:1
position: 1923077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1932473-1932520:1:exon

position:1932473:1
position: 1932473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1932520:1
position: 1932520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1933894-1934009:1:exon