Paracoccus marcusii strain CP157 plasmid pCP157_11, complete sequence.
type: Entry
definition: Paracoccus marcusii strain CP157 plasmid pCP157_11, complete sequence.
sequence version: NZ_CP065903.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NZ_CP065903.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN16776174
keyword: RefSeq
source: Paracoccus marcusii
organism: Paracoccus marcusii
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Paracoccus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP065903.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP SMRTPortal v. 2.3.0\nGenome Coverage :: 65x\nSequencing Technology :: PacBio; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 06:10:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,059\nCDSs (total) :: 3,997\nGenes (coding) :: 3,913\nCDSs (with protein) :: 3,913\nGenes (RNA) :: 62\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 3\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 47 of 84\nPseudo Genes (incomplete) :: 43 of 84\nPseudo Genes (internal stop) :: 20 of 84\nPseudo Genes (multiple problems) :: 23 of 84\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 10501
topology: circular
so has quality: SO_0000988
location: 1..10501
location: region:1-10501:1
RO_0002162: 59779

NZ_CP065903
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN16776174
type: BioSample
SIO_000068: biosample

1
title: High Potential for Secondary Metabolite Production of Paracoccus marcusii CP157, Isolated From the Crustacean Cancer pagurus
author: Leinberger, J.
author: Holste, J.
author: Bunk, B.
author: Freese, H.M.
author: Sproeer, C.
author: Dlugosch, L.
author: Kueck, A.-C.
author: Schulz, S.
author: Brinkhoff, T.
journal: Front Microbiol 12 (2021)

2
title: Direct Submission
author: Leinberger, J.
author: Brinkhoff, T.
author: Bunk, B.
author: Freese, H.M.
journal: Submitted (10-DEC-2020) Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10501:1
position: 10501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10501:1:source
so part of: sequence
organism: Paracoccus marcusii
mol type: genomic DNA
strain: CP157
isolation source: carapace
host: Cancer pagurus
plasmid: pCP157_11
country: Germany: Helgoland
lat lon: 54.12 N 7.53 E
collection date: 2014-10-15

59779
type: Taxonomy
SIO_000068: taxonomy

CP157_RS19805
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19805
old locus tag: CP157_03980
so part of: sequence
location: 1..1008
location: region:1-1008:1
so has part: feature:1-1008:1:exon
subclass of: SO_0000010

position:1008:1
position: 1008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1008:1:exon

CP157_RS19805
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19805
old locus tag: CP157_03980
inference: COORDINATES: protein motif:HMM:NF013235.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiation protein
translation: MKTVERMASNRADKASVIYPAEIGRAEWVLDNPPSAIGLKLLLLAVSALGEAVSDDVLHKLPVPLLRQVPGVAGMSKDDLVGVLRSLVVASATLDLPDVKRPGRGTVAVGALVSYAEIDYNEASILEVRLRFGDVFRKMLAASELFAIINRALALSMKSRYSVLLYQFIATHWQKKHVQQIKLPLADLRRVFALSPDTHGEFKAFRRHVLTRAVSEISKVSPYKLAAQPYFEGTRAVAGIVLSWEAKGAEMPAGSASAASSSGGGKPAARGRKPSASASAPRVSSGAEKLAFYAGMVKRKAPGVSGAVSSTMAQRLLAAGLVSQADLRAANLPTD
SIO_010081: CP157_RS19805
subclass of: SO_0000673
so part of: CP157_RS19805
location: 1..1008
location: region:1-1008:1
so has part: feature:1-1008:1:exon

WP_217847058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1008:1:exon

CP157_RS19810
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19810
so part of: sequence
location: 1079..1471
location: region:1079-1471:1
so has part: feature:1079-1471:1:exon
subclass of: SO_0000010

position:1079:1
position: 1079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1471:1
position: 1471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079-1471:1:exon

CP157_RS19810
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19810
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAGLSLSQAAKATGRSKSTIGRAIKAGRLSAIRNDDETFSIDPAELFRVFPRGGPEPSHAELVGTPGTAAEQLEIKTLRDELVKAQQRAAVAEAQAEERARSLEAAERNLADLRRILPAPSGSWWRFWSG
SIO_010081: CP157_RS19810
subclass of: SO_0000673
so part of: CP157_RS19810
location: 1079..1471
location: region:1079-1471:1
so has part: feature:1079-1471:1:exon

WP_217847059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1079-1471:1:exon

CP157_RS19815
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19815
old locus tag: CP157_03981
so part of: sequence
location: 1541..1801
location: region:1541-1801:1
so has part: feature:1541-1801:1:exon
subclass of: SO_0000010

position:1541:1
position: 1541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801:1
position: 1801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1541-1801:1:exon

CP157_RS19815
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19815
old locus tag: CP157_03981
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MIEIGKRYRLTTLGRDEGGYYHSSDNITVTGLEGNLLEVNGYEIVNMASPLFHALLDEEGQQAAYKQAEENFLKKISSEDLDPELS
SIO_010081: CP157_RS19815
subclass of: SO_0000673
so part of: CP157_RS19815
location: 1541..1801
location: region:1541-1801:1
so has part: feature:1541-1801:1:exon

WP_217847060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1541-1801:1:exon

CP157_RS19820
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19820
old locus tag: CP157_03982
so part of: sequence
location: complement(1836..3485)
location: region:1836-3485:-1
so has part: feature:1836-3485:-1:exon
subclass of: SO_0000010

position:1836:-1
position: 1836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3485:-1
position: 3485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1836-3485:-1:exon

CP157_RS19820
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19820
old locus tag: CP157_03982
inference: COORDINATES: protein motif:HMM:NF012766.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: M24 family metallopeptidase
translation: MNPKMEYLKFSDAFLSSVVSLNAVLVGGKNEFFNAQSPCCLADQISVGSGHEWAWADGELALTTSSVEVNSLRKHLSKYEIAVRQRQQQPLSHWLIEKADSRARIGICSRSWSAVQATSTARYLEKNGLENTCFLNVIHPGKSIRSSFYWKRLKSAPVDFLLKRLANNNVDSELITRGDLVSYLTGLRSASGGSVDAFLFMQKSNIPTLVTPHKIDQNAILKLHKMGYRHCDVNGFFEAVSKNDYEVGVDPAVASLDTYTQLGQNAVETREINYFSLDQHQNQDFQKVVHSFDAAVIETLSYIEYSSDISEISVSNFLHEKFSSIPEFLGLPFPIYVSFGERTSDPHPFPPATEKTLSDNDIVMLDAGIHSGLMTTDTTRMVVKANKYFIRRNYTIVLKALVQASLVRGTSAAERNDVIENLITSYNLSLGHSVGHAVIPGVSVHSFNKLFGSNNVSEIGESILFTIEPGVYFSGEAGFRLENLMVSNGTDCMPLTKIPIDVRPALPCMLSSEEIAWIDGYNRMSIEAHADSISPRARSWSMAATRWSM
SIO_010081: CP157_RS19820
subclass of: SO_0000673
so part of: CP157_RS19820
location: complement(1836..3485)
location: region:1836-3485:-1
so has part: feature:1836-3485:-1:exon

WP_217847061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1836-3485:-1:exon

CP157_RS19825
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19825
old locus tag: CP157_03983
so part of: sequence
location: complement(3482..4444)
location: region:3482-4444:-1
so has part: feature:3482-4444:-1:exon
subclass of: SO_0000010

position:3482:-1
position: 3482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4444:-1
position: 4444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3482-4444:-1:exon

CP157_RS19825
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19825
old locus tag: CP157_03983
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MYFQADTIAIEKTEVSSFIDSYVTNFGNISSLSDIKTKDLKELTKDSRTNPFKDSIEKIKTQTDDDKIGISVVDIPSGISEDKKLDVLYGCLSAAGLMESLSELVEDKKSGTPFTLYNASKENEEKLVEAGLKFYSPEDRLGFHTDGLIDGAKVKVPNYIAVYNIMVAYRKPGNFYYLPKSLWKDYNKFRDAFGINKDVSFSMTPIVYAGKDGELVSSEGKTLTCPVFSSDSCTDAIFFNGEVSSDCNKITTLAAEMTESLLDNPDRWAAPIKNRRLFIMNNKSGFHARDIFADPIDGVRYTRSFMRFVSEEGQCIKETA
SIO_010081: CP157_RS19825
subclass of: SO_0000673
so part of: CP157_RS19825
location: complement(3482..4444)
location: region:3482-4444:-1
so has part: feature:3482-4444:-1:exon

WP_217847062.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3482-4444:-1:exon

CP157_RS20535
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS20535
so part of: sequence
location: complement(4518..4646)
location: region:4518-4646:-1
so has part: feature:4518-4646:-1:exon
subclass of: SO_0000010

position:4518:-1
position: 4518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4646:-1
position: 4646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4518-4646:-1:exon

CP157_RS20535
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS20535
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSHYEITELEKDAYEIDLDDLAGDVSVCMQAPECTDASDPVG
SIO_010081: CP157_RS20535
subclass of: SO_0000673
so part of: CP157_RS20535
location: complement(4518..4646)
location: region:4518-4646:-1
so has part: feature:4518-4646:-1:exon

WP_276523136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4518-4646:-1:exon

CP157_RS19830
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19830
old locus tag: CP157_03984
so part of: sequence
location: 4941..6152
location: region:4941-6152:1
so has part: feature:4941-6152:1:exon
subclass of: SO_0000010

position:4941:1
position: 4941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6152:1
position: 6152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4941-6152:1:exon

CP157_RS19830
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19830
old locus tag: CP157_03984
inference: COORDINATES: protein motif:HMM:NF019310.2
GO function: GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO process: GO:0055085 - transmembrane transport [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MFS transporter
translation: MTTSTSTGKLSYMLFTLLSSLNIGGYLVLTSWLAVSATGDAQIVASLFLASLVCGMFFSNVAGVYTRTTHIRATLVLANTVRLLGALFLAFNVYLDDNLYFSLYAVTLLNVLGNSFIMIASSVSFQDIFPKEERPKRVAEVSFLRQVGIASGTGLTGIVLAWTGSLSAAIFLAIVTLIQTPLMILFSPYKKTIPISNIVSTESKLSRWLSGFSYALANRDLAIAMVVLSATFSVAQLTNVMVPVFVLSDLSSGANTYATLEMAWAIGGSLALIAARRIREASNRLALMFMAITGLTMVVFSINRSIPFSFVIYFIMGGLFCIIRFISDSRIMIDADTEYVGRVRAANLLLTNSIGVLIFGLPWIVDTSSVSTIYLVWGVVLFVLSATSVFLLNSSSHSAIGRS
SIO_010081: CP157_RS19830
subclass of: SO_0000673
so part of: CP157_RS19830
location: 4941..6152
location: region:4941-6152:1
so has part: feature:4941-6152:1:exon

WP_217847063.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4941-6152:1:exon

CP157_RS19835
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
gene: mobQ
locus tag: CP157_RS19835
old locus tag: CP157_03985
so part of: sequence
location: complement(6403..7500)
location: region:6403-7500:-1
so has part: feature:6403-7500:-1:exon
subclass of: SO_0000010

position:6403:-1
position: 6403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7500:-1
position: 7500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6403-7500:-1:exon

CP157_RS19835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
gene: mobQ
locus tag: CP157_RS19835
old locus tag: CP157_03985
inference: COORDINATES: protein motif:HMM:NF041496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIYHLRATMISRSAGRSATAAAAYRSAELIVDQRTGLAFDYRARGGVDHVETLAPADAPSWVQDRAALWNAVELAETRKNSQVAREVRVALPCELDAAQRLQLVRDFCQREFVDRGMVADIALHAPGREGDERNHHAHILLTTREIGPEGFTTKNRDWNAKELLEGWREAWARDTNHALERCGTHERVDHRTLEAQRVEARERAQEARERGDEAEALRETVRAVALDRQPLLQLSAGAWQLKERGIEVAAVQVWREIKEQAVEVARVAQELAEKAQVWLERVAERATEQVRDVVERVTPPDAWGEFFAAAAPGASAAAEGLARDLEVERRLEAQREAHEREARERVQEQERRAHERDRGLGHGF
SIO_010081: CP157_RS19835
subclass of: SO_0000673
so part of: CP157_RS19835
location: complement(6403..7500)
location: region:6403-7500:-1
so has part: feature:6403-7500:-1:exon

WP_217847054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6403-7500:-1:exon

CP157_RS19840
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19840
old locus tag: CP157_03986
so part of: sequence
location: 7657..7908
location: region:7657-7908:1
so has part: feature:7657-7908:1:exon
subclass of: SO_0000010

position:7657:1
position: 7657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7908:1
position: 7908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7657-7908:1:exon

CP157_RS19840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19840
old locus tag: CP157_03986
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009824546.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPRTIDQQIAEAQAKLNRLKTRQKASDTRRKIIVGAIVTTEALKDPKIARWMAATLRKNATREVDQKEIAGLLVELDAKAGTA
SIO_010081: CP157_RS19840
subclass of: SO_0000673
so part of: CP157_RS19840
location: 7657..7908
location: region:7657-7908:1
so has part: feature:7657-7908:1:exon

WP_217847055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7657-7908:1:exon

CP157_RS19845
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19845
old locus tag: CP157_03987
so part of: sequence
location: 7905..8465
location: region:7905-8465:1
so has part: feature:7905-8465:1:exon
subclass of: SO_0000010

position:7905:1
position: 7905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8465:1
position: 8465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7905-8465:1:exon

CP157_RS19845
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19845
old locus tag: CP157_03987
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAAAKSPAELIADLTDQVRLLRQDVSNLTATATTKAEAARLMASVQKITIDALEQNRQIGSTAAEMSRRMHRDSLTAAQEAAGQAVRGLEDKISAAANHMRLEAVKGRQQALYSFGGGLAVFGGIAALGAILGIVAFMLIQGRADANAFGKYPGVYCRSAGGELATGTSGRRFCAFWVDPYVPAD
SIO_010081: CP157_RS19845
subclass of: SO_0000673
so part of: CP157_RS19845
location: 7905..8465
location: region:7905-8465:1
so has part: feature:7905-8465:1:exon

WP_217847056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7905-8465:1:exon

CP157_RS19850
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19850
old locus tag: CP157_03989
so part of: sequence
location: 9482..9730
location: region:9482-9730:1
so has part: feature:9482-9730:1:exon
subclass of: SO_0000010

position:9482:1
position: 9482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9730:1
position: 9730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9482-9730:1:exon

CP157_RS19850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19850
old locus tag: CP157_03989
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002719915.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: BrnT family toxin
translation: MLMITWDAPKRQTNLAKHGLDFADLDEAFFLASVVVPAKAGRHMAIGRLADGTVAVVFATLGTQGVSVISMRPASARELSLL
SIO_010081: CP157_RS19850
subclass of: SO_0000673
so part of: CP157_RS19850
location: 9482..9730
location: region:9482-9730:1
so has part: feature:9482-9730:1:exon

WP_217847057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9482-9730:1:exon

CP157_RS19855
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19855
old locus tag: CP157_03990
pseudo: true
so part of: sequence
location: 9727..10017
location: region:9727-10017:1
so has part: feature:9727-10017:1:exon
subclass of: SO_0000010

position:9727:1
position: 9727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10017:1
position: 10017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9727-10017:1:exon

CP157_RS19855
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19855
old locus tag: CP157_03990
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013419516.1
note: internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: BrnA antitoxin family protein
SIO_010081: CP157_RS19855
subclass of: SO_0000673
so part of: CP157_RS19855
location: 9727..10017
location: region:9727-10017:1
so has part: feature:9727-10017:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9727-10017:1:exon