Paracoccus marcusii strain CP157 plasmid pCP157_09, complete sequence.
type: Entry
definition: Paracoccus marcusii strain CP157 plasmid pCP157_09, complete sequence.
sequence version: NZ_CP065901.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NZ_CP065901.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN16776174
keyword: RefSeq
source: Paracoccus marcusii
organism: Paracoccus marcusii
taxonomy: Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Paracoccus.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP065901.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nThis genome has a base modification file available.\n\n##Genome-Assembly-Data-START##\nAssembly Method :: HGAP SMRTPortal v. 2.3.0\nGenome Coverage :: 65x\nSequencing Technology :: PacBio; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 06:10:02\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,059\nCDSs (total) :: 3,997\nGenes (coding) :: 3,913\nCDSs (with protein) :: 3,913\nGenes (RNA) :: 62\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 50\nncRNAs :: 3\nPseudo Genes (total) :: 84\nCDSs (without protein) :: 84\nPseudo Genes (ambiguous residues) :: 0 of 84\nPseudo Genes (frameshifted) :: 47 of 84\nPseudo Genes (incomplete) :: 43 of 84\nPseudo Genes (internal stop) :: 20 of 84\nPseudo Genes (multiple problems) :: 23 of 84\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 11943
topology: circular
so has quality: SO_0000988
location: 1..11943
location: region:1-11943:1
RO_0002162: 59779

NZ_CP065901
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN16776174
type: BioSample
SIO_000068: biosample

1
title: High Potential for Secondary Metabolite Production of Paracoccus marcusii CP157, Isolated From the Crustacean Cancer pagurus
author: Leinberger, J.
author: Holste, J.
author: Bunk, B.
author: Freese, H.M.
author: Sproeer, C.
author: Dlugosch, L.
author: Kueck, A.-C.
author: Schulz, S.
author: Brinkhoff, T.
journal: Front Microbiol 12 (2021)

2
title: Direct Submission
author: Leinberger, J.
author: Brinkhoff, T.
author: Bunk, B.
author: Freese, H.M.
journal: Submitted (10-DEC-2020) Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Carl-von-Ossietzky Strasse 9-11, Oldenburg 26129, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11943:1
position: 11943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-11943:1:source
so part of: sequence
organism: Paracoccus marcusii
mol type: genomic DNA
strain: CP157
isolation source: carapace
host: Cancer pagurus
plasmid: pCP157_09
country: Germany: Helgoland
lat lon: 54.12 N 7.53 E
collection date: 2014-10-15

59779
type: Taxonomy
SIO_000068: taxonomy

CP157_RS19650
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19650
old locus tag: CP157_03953
so part of: sequence
location: 1..1008
location: region:1-1008:1
so has part: feature:1-1008:1:exon
subclass of: SO_0000010

position:1008:1
position: 1008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-1008:1:exon

CP157_RS19650
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19650
old locus tag: CP157_03953
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011655540.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: replication initiator protein A
translation: MALLPDRHPQKDFFILDIADVVPKDDTASMEHPMFSLATKPDMRHLHYASGDVRLEITPSYNGLPTIFDKDILIFCISQLMHMKNRGEKVGKRVRFTGRELLVSTNRPTNNLGYQRLEQAFKRLRGTTFKTDIRTGDRMETRIFGLIDEGGFVMRDDGSWRLDYCEVVLSDWLMRAIDSDQVVTISNDYFRLRRPLERRLYEIARKHCGNQLKWHIGLAKLQEKTGSNAPLKKFRLNLRQIIADDHTPFYRIELTGDDLVIFRPRNTKTQIAPAIILPDWAEEKARALAREKGRDYHALQADWLAFAQAETAKGNPPKNAGAAFVAYCGKQESLR
SIO_010081: CP157_RS19650
subclass of: SO_0000673
so part of: CP157_RS19650
location: 1..1008
location: region:1-1008:1
so has part: feature:1-1008:1:exon

WP_120445313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1-1008:1:exon

CP157_RS19655
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19655
so part of: sequence
location: complement(1012..1446)
location: region:1012-1446:-1
so has part: feature:1012-1446:-1:exon
subclass of: SO_0000010

position:1012:-1
position: 1012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1446:-1
position: 1446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012-1446:-1:exon

CP157_RS19655
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19655
inference: COORDINATES: protein motif:HMM:NF024139.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MSYTLGEAAKAVGFSKPTLSRAIKSGKLSARRLDDGSYSVDASELERWKDANGHRNRDVKRIATPTETPETPLETNALQAEVERLRAQVESDQRERGFLEQRIEDLKDRAERAERKEDQLHALLADLRPQTIAKPKGFWSRLFG
SIO_010081: CP157_RS19655
subclass of: SO_0000673
so part of: CP157_RS19655
location: complement(1012..1446)
location: region:1012-1446:-1
so has part: feature:1012-1446:-1:exon

WP_157001744.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1012-1446:-1:exon

CP157_RS19660
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19660
old locus tag: CP157_03954
so part of: sequence
location: complement(2028..3065)
location: region:2028-3065:-1
so has part: feature:2028-3065:-1:exon
subclass of: SO_0000010

position:2028:-1
position: 2028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3065:-1
position: 3065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2028-3065:-1:exon

CP157_RS19660
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19660
old locus tag: CP157_03954
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007425498.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: FUSC family protein
translation: MYVVPRPEVNDDPLHAVRLASMAVATFALIPFVQPAIPPLLVALPVGLMAGMRKAFDPKKAFGGPIAFIVMVWLMASIVSFARPMPVVLVTIMGLFYFLGFYLIQKTGNPMGMLLLIVTVLMSVMGMSSTAALEVMRDGFTEACIVAAILIPLLYAIFPPAAKENLVEIYTPAPGPHAASALIRAGVLLVMSFWLYTVIDLSNLMLAVAATFVLVFPTRETLFAEAKERTVSTALGACVAAMILFVLTLNAHLPILLGLVFLAGLFFGSRMMRGYYPGMVYQFGMSVTLALVAGALSTQEPAYAAMTRTVLTLVGAVAAAYLTAVLEALFLSRPAHLSEPASLFS
SIO_010081: CP157_RS19660
subclass of: SO_0000673
so part of: CP157_RS19660
location: complement(2028..3065)
location: region:2028-3065:-1
so has part: feature:2028-3065:-1:exon

WP_045983993.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2028-3065:-1:exon

CP157_RS19665
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19665
old locus tag: CP157_03955
so part of: sequence
location: complement(3075..4253)
location: region:3075-4253:-1
so has part: feature:3075-4253:-1:exon
subclass of: SO_0000010

position:3075:-1
position: 3075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4253:-1
position: 4253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3075-4253:-1:exon

CP157_RS19665
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19665
old locus tag: CP157_03955
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012178960.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HlyD family secretion protein
translation: MTDRPPARSADDPAAATAGKPEMEILHPDPAAAAAPARKNPAKKIALVVILLLGLLMAWYVATDRLAPYSSRGAVAAYIAQIAPRVSGQVTEVLVQDNAIVNSGEPLFRLDSRPFEIAVRQAEANLAQATQSIDASSASLVASQAQVAQARANLDNIRAAAERTLALVERGISSGAQRDAAEADLRTAEAQFSTAEANLRSAEAQLGELGQDNPQIQAAQFALEQAQYDLLSTTVVAPGLGVVTNVQLTSGQYLAAGNPGLTFLDAQGAWVVADFRENQLANVKPGDRVGLLFDAVPGTIFHGRLDSISWGIDPGRASVGGLPQNQPETRWFEPARRMPVRIELEGGMDAWPVNVRAGGKVSAVIYTQDDDGPIAWIANAMHHVQSTFSYLY
SIO_010081: CP157_RS19665
subclass of: SO_0000673
so part of: CP157_RS19665
location: complement(3075..4253)
location: region:3075-4253:-1
so has part: feature:3075-4253:-1:exon

WP_239441416.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3075-4253:-1:exon

CP157_RS19670
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19670
old locus tag: CP157_03956
so part of: sequence
location: complement(4292..4921)
location: region:4292-4921:-1
so has part: feature:4292-4921:-1:exon
subclass of: SO_0000010

position:4292:-1
position: 4292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4921:-1
position: 4921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4292-4921:-1:exon

CP157_RS19670
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19670
old locus tag: CP157_03956
inference: COORDINATES: protein motif:HMM:NF037625.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: TetR family transcriptional regulator
translation: MALNAIAHYPMSLIPANTHLSLRERQNAAVRSEIVQSGIKRFLDCGFDETTTDEIADDVGVSRRTVFRHFPIKEDIVLSWPLASVGQLRAAVAACPANEPPLVCMQSTIVKHVAAQAERHPGALLIAKLIEKTPRLRSRSHELTDAWESALTEGLIDRNPDQAAQAPLISVVAVATARLGARRWLAADGAITLTASINHAFDELALVGL
SIO_010081: CP157_RS19670
subclass of: SO_0000673
so part of: CP157_RS19670
location: complement(4292..4921)
location: region:4292-4921:-1
so has part: feature:4292-4921:-1:exon

WP_217847042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4292-4921:-1:exon

CP157_RS19675
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19675
old locus tag: CP157_03957
so part of: sequence
location: complement(5054..5554)
location: region:5054-5554:-1
so has part: feature:5054-5554:-1:exon
subclass of: SO_0000010

position:5054:-1
position: 5054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5554:-1
position: 5554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5054-5554:-1:exon

CP157_RS19675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19675
old locus tag: CP157_03957
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011387782.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MarR family transcriptional regulator
translation: MEGTQNGDAEGVNRVLLEQQICFRVYVASNLVTRLYRLHLDAMGLTYPQYLVMLILWETELQSVSQLGDRLYLDSGTLTPLLKRLEAAGLVVRRRDTIDERRVLIALTETGRALRERADAMLRALEGETCLLPGDLDVLGEQLDRYIWDLSAQLGTQGRVDAPPVD
SIO_010081: CP157_RS19675
subclass of: SO_0000673
so part of: CP157_RS19675
location: complement(5054..5554)
location: region:5054-5554:-1
so has part: feature:5054-5554:-1:exon

WP_045984000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5054-5554:-1:exon

CP157_RS19680
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19680
old locus tag: CP157_03958
so part of: sequence
location: complement(5557..5985)
location: region:5557-5985:-1
so has part: feature:5557-5985:-1:exon
subclass of: SO_0000010

position:5557:-1
position: 5557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5985:-1
position: 5985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5557-5985:-1:exon

CP157_RS19680
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19680
old locus tag: CP157_03958
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011159636.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: organic hydroperoxide resistance protein
translation: MSHLYTTRVTAVGGRNGTIKSEDGILNLQLAMPKELGGKGGATNPEQLFAAGYAACFENAVIHVTRGQSDKVRDNAIEVVGEVGLLPNGAGGFNLAVTLYVEIAGLDQAKAEEIVRAAHAVCPYSNAIHGNVDVKINVSTRG
SIO_010081: CP157_RS19680
subclass of: SO_0000673
so part of: CP157_RS19680
location: complement(5557..5985)
location: region:5557-5985:-1
so has part: feature:5557-5985:-1:exon

WP_045983995.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5557-5985:-1:exon

CP157_RS19685
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19685
old locus tag: CP157_03959
so part of: sequence
location: complement(6470..7417)
location: region:6470-7417:-1
so has part: feature:6470-7417:-1:exon
subclass of: SO_0000010

position:6470:-1
position: 6470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7417:-1
position: 7417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6470-7417:-1:exon

CP157_RS19685
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19685
old locus tag: CP157_03959
inference: COORDINATES: similar to AA sequence:RefSeq:WP_008125487.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4105 domain-containing protein
translation: MLIAAALVGLTVRFQLDGPARWFWILVVVATALAVLALRATGRRSASRAVLLASIIGALGWWLTIRPLGDRDWAADVAYGVTARIEGQTAILDHVRNFDWRSKQDFTSQWETRRYDISTLSSVDLATSTWDNPAIAHTLVSFGFSDGAYLTFSAEIRRERHESFSEIGGFFKKFELVLIAADEADILRLRTNIRREDVALYRLNLTPAQRRALFMTYLEKANQLAAQPAFYHTITANCTTIIFQLARLVAPGIPMDWRILLSGYLPDYLHDHGVTDAGLPLEELRANARISAKAQQADPAIPYSIAIRAEDPSKR
SIO_010081: CP157_RS19685
subclass of: SO_0000673
so part of: CP157_RS19685
location: complement(6470..7417)
location: region:6470-7417:-1
so has part: feature:6470-7417:-1:exon

WP_083445032.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6470-7417:-1:exon

CP157_RS19690
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19690
old locus tag: CP157_03960
so part of: sequence
location: complement(7491..8636)
location: region:7491-8636:-1
so has part: feature:7491-8636:-1:exon
subclass of: SO_0000010

position:7491:-1
position: 7491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8636:-1
position: 8636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7491-8636:-1:exon

CP157_RS19690
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19690
old locus tag: CP157_03960
inference: COORDINATES: similar to AA sequence:RefSeq:WP_015917739.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: alpha/beta fold hydrolase
translation: MDIRRGRLCADFISCLMVLAAVLSLSACAARPGPEVLRITEAHVPGAQTVTVYAATTRARAAGNVNVFTSGRASQPNYASFDISVPPNHQPGRIEWPEEQIDPQTSFATVGQTNLTQQGLLQQVAGSGDGRKDVVIFIHGYNYSFPEALYRLTQIKVDGNLDETPILFAWPSQAAVAGYVADKESATYSRDALTDLLAALARDSRIGTITVFAHSMGGWLTVEALRQLRLSGQDDVFNRLTVVLAAPDIDVDVFQAQMQVIGPMTPPMTVLVSSDDQALRVSNRLSRSRARIGALDITDPAVQQAARKAQLAIIDISSVEASDGLNHDRYIKLATLYANRRDEGGDTPGPGLRSTGAFVFNTVGATISSPFSIIGEALEGG
SIO_010081: CP157_RS19690
subclass of: SO_0000673
so part of: CP157_RS19690
location: complement(7491..8636)
location: region:7491-8636:-1
so has part: feature:7491-8636:-1:exon

WP_198144886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7491-8636:-1:exon

CP157_RS19695
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
gene: mobQ
locus tag: CP157_RS19695
old locus tag: CP157_03961
so part of: sequence
location: complement(8774..9931)
location: region:8774-9931:-1
so has part: feature:8774-9931:-1:exon
subclass of: SO_0000010

position:8774:-1
position: 8774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9931:-1
position: 9931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8774-9931:-1:exon

CP157_RS19695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
gene: mobQ
locus tag: CP157_RS19695
old locus tag: CP157_03961
inference: COORDINATES: protein motif:HMM:NF041496.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: MobQ family relaxase
translation: MAIYHFDASVISRSKGRSSTAASAYRAAERVVDRRTGEVHDYTRKHGVEHTEILAPAHAPDWARDRSALWNAVEQIERRKDAQVSREVRVALPSELSVEQNRDLVRGFVQEQFVARGMVADIALHAPGREGDQRNHHAHIMLTTREIGPEGFGAKNRDWNAKELLVDWRSSWAEHVNRTLERCSVHERVDHRTLEAQREDALERASAAERNGDERVHVAEMARAVELDRPPLPDVGARGWSMMRRGIATPASDRWQEVREIGLQVREVAREFRTQARDWLERTLDRVQERGAALGLTRAPETALERLQAARASRGAVDTPSSALERLQAARAGRGEDRGVEIERNIESAGHALTQQDRERERVLEQERALERQRAAEREGPSHER
SIO_010081: CP157_RS19695
subclass of: SO_0000673
so part of: CP157_RS19695
location: complement(8774..9931)
location: region:8774-9931:-1
so has part: feature:8774-9931:-1:exon

WP_217847040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8774-9931:-1:exon

CP157_RS19700
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19700
old locus tag: CP157_03962
so part of: sequence
location: 10080..10334
location: region:10080-10334:1
so has part: feature:10080-10334:1:exon
subclass of: SO_0000010

position:10080:1
position: 10080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10334:1
position: 10334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10080-10334:1:exon

CP157_RS19700
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19700
old locus tag: CP157_03962
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009824546.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPKTIDQQIATAEAKLALLRTKKKATDTRVKIIVGAVVVKAALETPDAAAKLAGLLRDRVTRDLDVKDIQQLLASLDKKAARNG
SIO_010081: CP157_RS19700
subclass of: SO_0000673
so part of: CP157_RS19700
location: 10080..10334
location: region:10080-10334:1
so has part: feature:10080-10334:1:exon

WP_120445320.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10080-10334:1:exon

CP157_RS19705
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19705
old locus tag: CP157_03963
so part of: sequence
location: 10375..10953
location: region:10375-10953:1
so has part: feature:10375-10953:1:exon
subclass of: SO_0000010

position:10375:1
position: 10375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10953:1
position: 10953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10375-10953:1:exon

CP157_RS19705
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19705
old locus tag: CP157_03963
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MLEALVSVTAENTTTLIDVQRQAAATAASVKDARTYMATVVKNTDWETNGKKIAAILDKALLQDRAALHAVSEAAREMRGTSIEITHRAGDAAVAQKDASKAFHSAAERLLRVMEVHQQGRWRRMGTMALIGALCGAVGFFAREPATKFQHLWDAGSALRQDAAHRDCKTLGGETLPSGERLACVIWQDTAQ
SIO_010081: CP157_RS19705
subclass of: SO_0000673
so part of: CP157_RS19705
location: 10375..10953
location: region:10375-10953:1
so has part: feature:10375-10953:1:exon

WP_147405629.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10375-10953:1:exon

CP157_RS19710
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19710
old locus tag: CP157_03964
so part of: sequence
location: complement(10972..11394)
location: region:10972-11394:-1
so has part: feature:10972-11394:-1:exon
subclass of: SO_0000010

position:10972:-1
position: 10972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11394:-1
position: 11394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10972-11394:-1:exon

CP157_RS19710
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19710
old locus tag: CP157_03964
inference: COORDINATES: similar to AA sequence:RefSeq:WP_007294178.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system VapC family toxin
translation: MFILDTNVVSELRKAKAGKADANVVAWAAGQDPSALFLSAITLLELEMGIRQAERRDGAQGAVLRAWMTDRVLPAFEGRILPVDGPVALCCAALHVPDPRSDRDALIAATGLVHAMPIVTRNVADFAPTGVQIINPWDIV
SIO_010081: CP157_RS19710
subclass of: SO_0000673
so part of: CP157_RS19710
location: complement(10972..11394)
location: region:10972-11394:-1
so has part: feature:10972-11394:-1:exon

WP_217847041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10972-11394:-1:exon

CP157_RS19715
type: Gene
subclass of: SO_0000704
RO_0002162: 59779
locus tag: CP157_RS19715
old locus tag: CP157_03965
so part of: sequence
location: complement(11394..11648)
location: region:11394-11648:-1
so has part: feature:11394-11648:-1:exon
subclass of: SO_0000010

position:11648:-1
position: 11648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11394-11648:-1:exon

CP157_RS19715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59779
locus tag: CP157_RS19715
old locus tag: CP157_03965
inference: COORDINATES: similar to AA sequence:RefSeq:WP_017134811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: type II toxin-antitoxin system prevent-host-death family antitoxin
translation: MELTTITSRTFNQDASGAKRAAQNGPVFITDRGKPAHVLLSIEAYRRLTGQRESIIDLLADTEAAEVSFEPSRLSGLAKPVDLS
SIO_010081: CP157_RS19715
subclass of: SO_0000673
so part of: CP157_RS19715
location: complement(11394..11648)
location: region:11394-11648:-1
so has part: feature:11394-11648:-1:exon

WP_120445315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11394-11648:-1:exon