Taeniopygia guttata isolate Blue55 chromosome 37, bTaeGut1.4.pri, whole genome shotgun sequence.
type: Entry
definition: Taeniopygia guttata isolate Blue55 chromosome 37, bTaeGut1.4.pri, whole genome shotgun sequence.
sequence version: NC_054769.1
sequence date: 2021-05-26
sequence: sequence
division: CON
label: NC_054769.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA558048
dblink: SAMN02981239
keyword: WGS
keyword: RefSeq
source: Taeniopygia guttata (zebra finch)
organism: Taeniopygia guttata
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
reference: 1
references: 33911273
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM030979.1.\nAssembly name: bTaeGut1.4.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/05/04. The original whole-genome shotgun project has the\naccession RRCB00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 09-APR-2021\nAssembly Method :: FALCON v. 5.1.1; FALCON unzip v.\n Nov2017(uc4); Purge_dups v. 1.0.1;\n Scaff10X v. 4.1.0; Bionano Solve\n BspQI/BssSI v. 3.4; Salsa2 v. 2.2.; Arrow\n polishing v. variantCaller 2.3.3; Merfin\n filtering v. 0.1; longranger align v.\n 2.2.2; freebayes polishing v. 1.3.1;\n gEVAL manual curation v. 2021-04-09; VGP\n pipeline v. 1.7\nAssembly Name :: bTaeGut1.4.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 88.2x\nSequencing Technology :: PacBio RSII; 10X Genomics linked reads;\n Bionano Genomics two enzymes; Arima\n Genomics Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Taeniopygia guttata Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.6\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1798728
topology: linear
so has quality: SO_0000987
location: 1..1798728
location: region:1-1798728:1
RO_0002162: 59729

NC_054769
type: RefSeq
SIO_000068: refseq

PRJNA558048
type: BioProject
SIO_000068: bioproject

SAMN02981239
type: BioSample
SIO_000068: biosample

1
title: Towards complete and error-free genome assemblies of all vertebrate species
author: Rhie, A.
author: McCarthy, S.A.
author: Fedrigo, O.
author: Damas, J.
author: Formenti, G.
author: Koren, S.
author: Uliano-Silva, M.
author: Chow, W.
author: Fungtammasan, A.
author: Kim, J.
author: Lee, C.
author: Ko, B.J.
author: Chaisson, M.
author: Gedman, G.L.
author: Cantin, L.J.
author: Thibaud-Nissen, F.
author: Haggerty, L.
author: Bista, I.
author: Smith, M.
author: Haase, B.
author: Mountcastle, J.
author: Winkler, S.
author: Paez, S.
author: Howard, J.
author: Vernes, S.C.
author: Lama, T.M.
author: Grutzner, F.
author: Warren, W.C.
author: Balakrishnan, C.N.
author: Burt, D.
author: George, J.M.
author: Biegler, M.T.
author: Iorns, D.
author: Digby, A.
author: Eason, D.
author: Robertson, B.
author: Edwards, T.
author: Wilkinson, M.
author: Turner, G.
author: Meyer, A.
author: Kautt, A.F.
author: Franchini, P.
author: Detrich, H.W. 3rd
author: Svardal, H.
author: Wagner, M.
author: Naylor, G.J.P.
author: Pippel, M.
author: Malinsky, M.
author: Mooney, M.
author: Simbirsky, M.
author: Hannigan, B.T.
author: Pesout, T.
author: Houck, M.
author: Misuraca, A.
author: Kingan, S.B.
author: Hall, R.
author: Kronenberg, Z.
author: Sovic, I.
author: Dunn, C.
author: Ning, Z.
author: Hastie, A.
author: Lee, J.
author: Selvaraj, S.
author: Green, R.E.
author: Putnam, N.H.
author: Gut, I.
author: Ghurye, J.
author: Garrison, E.
author: Sims, Y.
author: Collins, J.
author: Pelan, S.
author: Torrance, J.
author: Tracey, A.
author: Wood, J.
author: Dagnew, R.E.
author: Guan, D.
author: London, S.E.
author: Clayton, D.F.

33911273
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1798728:1
position: 1798728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1798728:1:source
so part of: sequence
organism: Taeniopygia guttata
mol type: genomic DNA
isolate: Blue55
chromosome: 37
sex: female
tissue type: Muscle, blood, brain
dev stage: adult
country: USA
lat lon: 36.0014 N 78.9382 W
collected by: Matt Biegler, Duke University and Rockefeller University

59729
type: Taxonomy
SIO_000068: taxonomy

LOC116809255
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116809255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2930..3466)
location: region:2930-3466:-1
so has part: feature:2930-3466:-1:exon
subclass of: SO_0000011

116809255
type: Gene
SIO_000068: ncbigene

position:2930:-1
position: 2930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3466:-1
position: 3466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2930-3466:-1:exon

LOC116809255
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116809255
product: uncharacterized LOC116809255
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_005978633.1
SIO_010081: LOC116809255
subclass of: SO_0000673
so part of: LOC116809255
location: complement(join(2930..3302,3390..3466))
location: region:2930-3466:-1
so has part: feature:3390-3466:-1:exon
so has part: feature:2930-3302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3390-3466:-1:exon

position:3390:-1
position: 3390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2930-3302:-1:exon

position:3302:-1
position: 3302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116807915
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC116807915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5467..8526)
location: region:5467-8526:-1
so has part: feature:5467-8526:-1:exon
subclass of: SO_0000011

116807915
type: Gene
SIO_000068: ncbigene

position:5467:-1
position: 5467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8526:-1
position: 8526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5467-8526:-1:exon

LOC116807915
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116807915
product: uncharacterized LOC116807915, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005978634.1
SIO_010081: LOC116807915
subclass of: SO_0000673
so part of: LOC116807915
location: complement(join(5467..5588,8204..8371,8459..8526))
location: region:5467-8526:-1
so has part: feature:8459-8526:-1:exon
so has part: feature:8204-8371:-1:exon
so has part: feature:5467-5588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8459-8526:-1:exon

position:8459:-1
position: 8459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8204-8371:-1:exon

position:8204:-1
position: 8204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8371:-1
position: 8371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5467-5588:-1:exon

position:5588:-1
position: 5588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116807915
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC116807915
product: uncharacterized LOC116807915, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005978635.1
SIO_010081: LOC116807915
subclass of: SO_0000673
so part of: LOC116807915
location: complement(join(5467..5588,5672..5745))
location: region:5467-5745:-1
so has part: feature:5672-5745:-1:exon
so has part: feature:5467-5588:-1:exon

position:5745:-1
position: 5745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5672-5745:-1:exon

position:5672:-1
position: 5672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5467-5588:-1:exon

LOC121468855
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468855
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5748..6729)
location: region:5748-6729:-1
so has part: feature:5748-6729:-1:exon
subclass of: SO_0000011

121468855
type: Gene
SIO_000068: ncbigene

position:5748:-1
position: 5748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6729:-1
position: 6729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5748-6729:-1:exon

LOC121468855
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468855
product: uncharacterized LOC121468855
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005978636.1
SIO_010081: LOC121468855
subclass of: SO_0000673
so part of: LOC121468855
location: complement(join(5748..5839,5927..5968,6047..6729))
location: region:5748-6729:-1
so has part: feature:6047-6729:-1:exon
so has part: feature:5927-5968:-1:exon
so has part: feature:5748-5839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6047-6729:-1:exon

position:6047:-1
position: 6047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5927-5968:-1:exon

position:5927:-1
position: 5927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5968:-1
position: 5968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5748-5839:-1:exon

position:5839:-1
position: 5839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468854
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468854
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9275..11402)
location: region:9275-11402:-1
so has part: feature:9275-11402:-1:exon
subclass of: SO_0000011

121468854
type: Gene
SIO_000068: ncbigene

position:9275:-1
position: 9275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11402:-1
position: 11402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9275-11402:-1:exon

LOC121468854
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468854
product: uncharacterized LOC121468854, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005978632.1
SIO_010081: LOC121468854
subclass of: SO_0000673
so part of: LOC121468854
location: complement(join(9275..9647,9735..9776,9855..10672,10756..10923,11011..11052,11131..11402))
location: region:9275-11402:-1
so has part: feature:11131-11402:-1:exon
so has part: feature:11011-11052:-1:exon
so has part: feature:10756-10923:-1:exon
so has part: feature:9855-10672:-1:exon
so has part: feature:9735-9776:-1:exon
so has part: feature:9275-9647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11131-11402:-1:exon

position:11131:-1
position: 11131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11011-11052:-1:exon

position:11011:-1
position: 11011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11052:-1
position: 11052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10756-10923:-1:exon

position:10756:-1
position: 10756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10923:-1
position: 10923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9855-10672:-1:exon

position:9855:-1
position: 9855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10672:-1
position: 10672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9735-9776:-1:exon

position:9735:-1
position: 9735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9776:-1
position: 9776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9275-9647:-1:exon

position:9647:-1
position: 9647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468854
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468854
product: uncharacterized LOC121468854, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005978631.1
SIO_010081: LOC121468854
subclass of: SO_0000673
so part of: LOC121468854
location: complement(join(9275..9396,9480..9647,9735..9776,9855..10923,11011..11052,11131..11402))
location: region:9275-11402:-1
so has part: feature:11131-11402:-1:exon
so has part: feature:11011-11052:-1:exon
so has part: feature:9855-10923:-1:exon
so has part: feature:9735-9776:-1:exon
so has part: feature:9480-9647:-1:exon
so has part: feature:9275-9396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11131-11402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11011-11052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9855-10923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9735-9776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9480-9647:-1:exon

position:9480:-1
position: 9480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9275-9396:-1:exon

position:9396:-1
position: 9396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468854
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468854
product: uncharacterized LOC121468854, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_005978630.1
SIO_010081: LOC121468854
subclass of: SO_0000673
so part of: LOC121468854
location: complement(join(9275..9647,9735..9776,9855..10923,11011..11052,11131..11402))
location: region:9275-11402:-1
so has part: feature:11131-11402:-1:exon
so has part: feature:11011-11052:-1:exon
so has part: feature:9855-10923:-1:exon
so has part: feature:9735-9776:-1:exon
so has part: feature:9275-9647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11131-11402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11011-11052:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9855-10923:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9735-9776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9275-9647:-1:exon

LOC121468831
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15559..16979)
location: region:15559-16979:-1
so has part: feature:15559-16979:-1:exon
subclass of: SO_0000010

121468831
type: Gene
SIO_000068: ncbigene

position:15559:-1
position: 15559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16979:-1
position: 16979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15559-16979:-1:exon

LOC121468831
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468831
product: ferritin, higher subunit-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 long SRA reads, 53 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 156 samples with support for all annotated introns
transcript id: XM_041712989.1
SIO_010081: LOC121468831
subclass of: SO_0000673
so part of: LOC121468831
location: complement(join(15559..15884,16082..16207,16284..16430,16623..16979))
location: region:15559-16979:-1
so has part: feature:16623-16979:-1:exon
so has part: feature:16284-16430:-1:exon
so has part: feature:16082-16207:-1:exon
so has part: feature:15559-15884:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16623-16979:-1:exon

position:16623:-1
position: 16623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16284-16430:-1:exon

position:16284:-1
position: 16284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16430:-1
position: 16430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16082-16207:-1:exon

position:16082:-1
position: 16082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16207:-1
position: 16207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:15559-15884:-1:exon

position:15884:-1
position: 15884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468831
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468831
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ferritin, higher subunit-like
translation: MDSQIRQNYHRDCEAAINRMANMELYASYVYLSMGFYFDRDDVALPRVSQFFLQQSREEREHAEGLLRFQTRRGGRILLQDIKKPERDAWGSALEAVEAALQLEKSVNQALLDLHALASEKGDPHLCDFLESNYLDEQVKAIKELGDHATNLRRLAGGATGPGGASAGLGEYLFDRLSLEERS
SIO_010081: LOC121468831
subclass of: SO_0000673
so part of: LOC121468831
location: complement(join(15708..15884,16082..16207,16284..16430,16623..16724))
location: region:15708-16724:-1
so has part: feature:16623-16724:-1:exon
so has part: feature:16284-16430:-1:exon
so has part: feature:16082-16207:-1:exon
so has part: feature:15708-15884:-1:exon

XP_041568923.1
type: Protein
SIO_000068: ncbiprotein

position:15708:-1
position: 15708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16724:-1
position: 16724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16623-16724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16284-16430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16082-16207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15708-15884:-1:exon

BAX
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: BAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17911..20971)
location: region:17911-20971:-1
so has part: feature:17911-20971:-1:exon
subclass of: SO_0000010

121468830
type: Gene
SIO_000068: ncbigene

position:17911:-1
position: 17911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20971:-1
position: 20971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17911-20971:-1:exon

BAX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: BAX
product: BCL2 associated X, apoptosis regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_041712988.1
SIO_010081: BAX
subclass of: SO_0000673
so part of: BAX
location: complement(join(17911..18855,19126..19230,19305..19440,19520..19681,20674..20722,20833..20971))
location: region:17911-20971:-1
so has part: feature:20833-20971:-1:exon
so has part: feature:20674-20722:-1:exon
so has part: feature:19520-19681:-1:exon
so has part: feature:19305-19440:-1:exon
so has part: feature:19126-19230:-1:exon
so has part: feature:17911-18855:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:20833-20971:-1:exon

position:20833:-1
position: 20833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20674-20722:-1:exon

position:20674:-1
position: 20674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20722:-1
position: 20722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:19520-19681:-1:exon

position:19520:-1
position: 19520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19681:-1
position: 19681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:19305-19440:-1:exon

position:19305:-1
position: 19305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19440:-1
position: 19440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:19126-19230:-1:exon

position:19126:-1
position: 19126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19230:-1
position: 19230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:17911-18855:-1:exon

position:18855:-1
position: 18855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BAX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: BAX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis regulator BAX
translation: MAAAAASAQRGGGGGGGGGDPGADPGAGAAGGEPAPPPGGGGASSDQIMQTGAILLRAFVRDRVERCGDPQAVALSVAELGEPQPSSPDTKRLSECLRRIGDELDSNMELQRMIEQVGCDAPKKLFFRVAKEMFADGTFNWGRVVALFYFACKLVLKALCTKVPELVQTILRWTMEYLQEHVLAWIQAQGGWEGLLSHFGTPTWQTITIFAAGVLTASLTIWKMS
SIO_010081: BAX
subclass of: SO_0000673
so part of: BAX
location: complement(join(18754..18855,19126..19230,19305..19440,19520..19681,20674..20722,20833..20956))
location: region:18754-20956:-1
so has part: feature:20833-20956:-1:exon
so has part: feature:20674-20722:-1:exon
so has part: feature:19520-19681:-1:exon
so has part: feature:19305-19440:-1:exon
so has part: feature:19126-19230:-1:exon
so has part: feature:18754-18855:-1:exon

XP_041568922.1
type: Protein
SIO_000068: ncbiprotein

position:18754:-1
position: 18754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20956:-1
position: 20956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20833-20956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20674-20722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:19520-19681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:19305-19440:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:19126-19230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18754-18855:-1:exon

KASH5
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: KASH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22408..26113
location: region:22408-26113:1
so has part: feature:22408-26113:1:exon
subclass of: SO_0000010

121468828
type: Gene
SIO_000068: ncbigene

position:22408:1
position: 22408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26113:1
position: 26113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22408-26113:1:exon

KASH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: KASH5
product: KASH domain containing 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_041712982.1
SIO_010081: KASH5
subclass of: SO_0000673
so part of: KASH5
location: join(22408..22512,22581..22766,22840..22923,23181..23612,23686..23760,23860..24040,24267..24316,24397..24463,24543..24686,24768..24885,24962..25012,25086..25163,25242..25298,25397..25456,25565..25629,25718..25775,25842..26113)
location: region:22408-26113:1
so has part: feature:22408-22512:1:exon
so has part: feature:22581-22766:1:exon
so has part: feature:22840-22923:1:exon
so has part: feature:23181-23612:1:exon
so has part: feature:23686-23760:1:exon
so has part: feature:23860-24040:1:exon
so has part: feature:24267-24316:1:exon
so has part: feature:24397-24463:1:exon
so has part: feature:24543-24686:1:exon
so has part: feature:24768-24885:1:exon
so has part: feature:24962-25012:1:exon
so has part: feature:25086-25163:1:exon
so has part: feature:25242-25298:1:exon
so has part: feature:25397-25456:1:exon
so has part: feature:25565-25629:1:exon
so has part: feature:25718-25775:1:exon
so has part: feature:25842-26113:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22408-22512:1:exon

position:22512:1
position: 22512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:22581-22766:1:exon

position:22581:1
position: 22581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22766:1
position: 22766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22840-22923:1:exon

position:22840:1
position: 22840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22923:1
position: 22923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23181-23612:1:exon

position:23181:1
position: 23181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23612:1
position: 23612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:23686-23760:1:exon

position:23686:1
position: 23686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23760:1
position: 23760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:23860-24040:1:exon

position:23860:1
position: 23860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24040:1
position: 24040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:24267-24316:1:exon

position:24267:1
position: 24267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24316:1
position: 24316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:24397-24463:1:exon

position:24397:1
position: 24397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24463:1
position: 24463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:24543-24686:1:exon

position:24543:1
position: 24543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24686:1
position: 24686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:24768-24885:1:exon

position:24768:1
position: 24768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24885:1
position: 24885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:24962-25012:1:exon

position:24962:1
position: 24962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25012:1
position: 25012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:25086-25163:1:exon

position:25086:1
position: 25086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25163:1
position: 25163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:25242-25298:1:exon

position:25242:1
position: 25242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25298:1
position: 25298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:25397-25456:1:exon

position:25397:1
position: 25397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25456:1
position: 25456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:25565-25629:1:exon

position:25565:1
position: 25565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25629:1
position: 25629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:25718-25775:1:exon

position:25718:1
position: 25718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25775:1
position: 25775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:25842-26113:1:exon

position:25842:1
position: 25842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KASH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: KASH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein KASH5
translation: MDAPPWPLPHGCPPGHLPQGLQGGSPELAGRKPGYHRGGLHRHRPGGAGPAHAVDVPAPEPGLPLREAAAGALRGPGWCGGKRGGVCPSIKARWEAAERRRHRERSGNARPAWGGGATPPFLWAGTARARPRPSLRPEAIPAAPSAPRRSGDSPPERNPQKPPETAAVPGTPPNTMAAGVPCAPGAVIPLPAPAESGCSDEFALDCTFAACDPERTGMVRPQQVVEYVAAMTGHSGHDGRLQALRRALDPAAAGTALDWARFRTAMGAWIAACRQDGAEEQDVATGDTGPGPAEDDGHTTPAAAQLQGDNMDVTTPSAEAAGLRSRARQLAAQNAKLQRDVELAEELNARLAEEIAELQTQLRSSRQALEHARAAVDELDDVKAVVKQLEEENTELRRQARHAEKEQRSLCSQAECLQEENQRLLAEGQGLREQIQAQAARTASLEDQLCRCTALLSARDAALAQAGQRAQELTTALEEYKRMVQELRLEMTQLRQQMGQMRDAWAMRPWCPGSQTDIQATAAVSRETADNEEEEEEEDRGTALSGGGALLWSSEEVTKAVAPQAPLSPWTVLSPWALALLALLALLYLWPCQWPQLQLHYRSPPPL
SIO_010081: KASH5
subclass of: SO_0000673
so part of: KASH5
location: join(22709..22766,22840..22923,23181..23612,23686..23760,23860..24040,24267..24316,24397..24463,24543..24686,24768..24885,24962..25012,25086..25163,25242..25298,25397..25456,25565..25629,25718..25775,25842..26087)
location: region:22709-26087:1
so has part: feature:22709-22766:1:exon
so has part: feature:22840-22923:1:exon
so has part: feature:23181-23612:1:exon
so has part: feature:23686-23760:1:exon
so has part: feature:23860-24040:1:exon
so has part: feature:24267-24316:1:exon
so has part: feature:24397-24463:1:exon
so has part: feature:24543-24686:1:exon
so has part: feature:24768-24885:1:exon
so has part: feature:24962-25012:1:exon
so has part: feature:25086-25163:1:exon
so has part: feature:25242-25298:1:exon
so has part: feature:25397-25456:1:exon
so has part: feature:25565-25629:1:exon
so has part: feature:25718-25775:1:exon
so has part: feature:25842-26087:1:exon

XP_041568916.1
type: Protein
SIO_000068: ncbiprotein

position:22709:1
position: 22709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26087:1
position: 26087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22709-22766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:22840-22923:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23181-23612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:23686-23760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:23860-24040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:24267-24316:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:24397-24463:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:24543-24686:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:24768-24885:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:24962-25012:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:25086-25163:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:25242-25298:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:25397-25456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:25565-25629:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:25718-25775:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:25842-26087:1:exon

FLT3LG
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: FLT3LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(26186..28612)
location: region:26186-28612:-1
so has part: feature:26186-28612:-1:exon
subclass of: SO_0000010

121468829
type: Gene
SIO_000068: ncbigene

position:26186:-1
position: 26186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28612:-1
position: 28612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26186-28612:-1:exon

FLT3LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FLT3LG
product: fms related receptor tyrosine kinase 3 ligand, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_041712987.1
SIO_010081: FLT3LG
subclass of: SO_0000673
so part of: FLT3LG
location: complement(join(26186..26337,26440..26952,27024..27156,27441..27584,27709..27762,28049..28150,28256..28612))
location: region:26186-28612:-1
so has part: feature:28256-28612:-1:exon
so has part: feature:28049-28150:-1:exon
so has part: feature:27709-27762:-1:exon
so has part: feature:27441-27584:-1:exon
so has part: feature:27024-27156:-1:exon
so has part: feature:26440-26952:-1:exon
so has part: feature:26186-26337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28256-28612:-1:exon

position:28256:-1
position: 28256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28049-28150:-1:exon

position:28049:-1
position: 28049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28150:-1
position: 28150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27709-27762:-1:exon

position:27709:-1
position: 27709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27762:-1
position: 27762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:27441-27584:-1:exon

position:27441:-1
position: 27441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27584:-1
position: 27584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:27024-27156:-1:exon

position:27024:-1
position: 27024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27156:-1
position: 27156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:26440-26952:-1:exon

position:26440:-1
position: 26440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26952:-1
position: 26952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:26186-26337:-1:exon

position:26337:-1
position: 26337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FLT3LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FLT3LG
product: fms related receptor tyrosine kinase 3 ligand, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041712985.1
SIO_010081: FLT3LG
subclass of: SO_0000673
so part of: FLT3LG
location: complement(join(26186..26337,26440..26952,27024..27156,27441..27584,27709..27837,28256..28593))
location: region:26186-28593:-1
so has part: feature:28256-28593:-1:exon
so has part: feature:27709-27837:-1:exon
so has part: feature:27441-27584:-1:exon
so has part: feature:27024-27156:-1:exon
so has part: feature:26440-26952:-1:exon
so has part: feature:26186-26337:-1:exon

position:28593:-1
position: 28593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28256-28593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27709-27837:-1:exon

position:27837:-1
position: 27837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27441-27584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27024-27156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26440-26952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26186-26337:-1:exon

FLT3LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FLT3LG
product: fms related receptor tyrosine kinase 3 ligand, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_041712984.1
SIO_010081: FLT3LG
subclass of: SO_0000673
so part of: FLT3LG
location: complement(join(26186..26337,26440..26952,27024..27156,27441..27584,27709..27837,28049..28150))
location: region:26186-28150:-1
so has part: feature:28049-28150:-1:exon
so has part: feature:27709-27837:-1:exon
so has part: feature:27441-27584:-1:exon
so has part: feature:27024-27156:-1:exon
so has part: feature:26440-26952:-1:exon
so has part: feature:26186-26337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28049-28150:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27709-27837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27441-27584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27024-27156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26440-26952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26186-26337:-1:exon

FLT3LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: FLT3LG
product: fms related receptor tyrosine kinase 3 ligand, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041712986.1
SIO_010081: FLT3LG
subclass of: SO_0000673
so part of: FLT3LG
location: complement(join(26186..26337,26440..26952,27024..27156,27441..27584,27709..27804,28049..28140))
location: region:26186-28140:-1
so has part: feature:28049-28140:-1:exon
so has part: feature:27709-27804:-1:exon
so has part: feature:27441-27584:-1:exon
so has part: feature:27024-27156:-1:exon
so has part: feature:26440-26952:-1:exon
so has part: feature:26186-26337:-1:exon

position:28140:-1
position: 28140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28049-28140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27709-27804:-1:exon

position:27804:-1
position: 27804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27441-27584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27024-27156:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26440-26952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26186-26337:-1:exon

FLT3LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FLT3LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fms-related tyrosine kinase 3 ligand isoform X2
translation: MDLPPLRSALVPLLLLLAVPTPSICCSFGFNPISSTFSTHLNNLTPWLLLDYPVAMPSNLEPDSVCSDLWGLHFGALALQRMLGVAGKDLAPLLRNLLAQLHFVAECHIQDPQRCVRLEMVNVSQLLETLVQHLGGLQGRPLHFPGCARLRCHPGPALTSPAVRHEGLLGAKQGPPSPAGHGLVLLGGVGVALGLVAVGWVLWRRPCAQVGTPGALRGTGDTGEDGVPGDAAGGEGTRGTGGGVCTGDTVDAGCRGDLGSTGGCCGDTGSTGGCLGVTGRRTDNTGSTRERWEVIPLSPPQPSQGPPTWEQDGT
SIO_010081: FLT3LG
subclass of: SO_0000673
so part of: FLT3LG
location: complement(join(26471..26952,27024..27156,27441..27584,27709..27762,28049..28150,28256..28285))
location: region:26471-28285:-1
so has part: feature:28256-28285:-1:exon
so has part: feature:28049-28150:-1:exon
so has part: feature:27709-27762:-1:exon
so has part: feature:27441-27584:-1:exon
so has part: feature:27024-27156:-1:exon
so has part: feature:26471-26952:-1:exon

XP_041568921.1
type: Protein
SIO_000068: ncbiprotein

position:26471:-1
position: 26471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28285:-1
position: 28285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28256-28285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:28049-28150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27709-27762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:27441-27584:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:27024-27156:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:26471-26952:-1:exon

FLT3LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FLT3LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fms-related tyrosine kinase 3 ligand isoform X1
translation: MPSNLEPDSVCSDLWGLHFGALALQRMLGVAGKDLAPLLRNLLAQLHFVAECHIQDPQRCVRLEMVNVSQLLETLVQHLGGLQGRPLHFPGCARLRCHPGPALTSPAVRHEGLLGAKQGPPSPAGHGLVLLGGVGVALGLVAVGWVLWRRPCAQVGTPGALRGTGDTGEDGVPGDAAGGEGTRGTGGGVCTGDTVDAGCRGDLGSTGGCCGDTGSTGGCLGVTGRRTDNTGSTRERWEVIPLSPPQPSQGPPTWEQDGT
SIO_010081: FLT3LG
subclass of: SO_0000673
so part of: FLT3LG
location: complement(join(26471..26952,27024..27156,27441..27584,27709..27729))
location: region:26471-27729:-1
so has part: feature:27709-27729:-1:exon
so has part: feature:27441-27584:-1:exon
so has part: feature:27024-27156:-1:exon
so has part: feature:26471-26952:-1:exon

XP_041568918.1
type: Protein
SIO_000068: ncbiprotein

position:27729:-1
position: 27729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27709-27729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27441-27584:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27024-27156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26471-26952:-1:exon

FLT3LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FLT3LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fms-related tyrosine kinase 3 ligand isoform X1
translation: MPSNLEPDSVCSDLWGLHFGALALQRMLGVAGKDLAPLLRNLLAQLHFVAECHIQDPQRCVRLEMVNVSQLLETLVQHLGGLQGRPLHFPGCARLRCHPGPALTSPAVRHEGLLGAKQGPPSPAGHGLVLLGGVGVALGLVAVGWVLWRRPCAQVGTPGALRGTGDTGEDGVPGDAAGGEGTRGTGGGVCTGDTVDAGCRGDLGSTGGCCGDTGSTGGCLGVTGRRTDNTGSTRERWEVIPLSPPQPSQGPPTWEQDGT
SIO_010081: FLT3LG
subclass of: SO_0000673
so part of: FLT3LG
location: complement(join(26471..26952,27024..27156,27441..27584,27709..27729))
location: region:26471-27729:-1
so has part: feature:27709-27729:-1:exon
so has part: feature:27441-27584:-1:exon
so has part: feature:27024-27156:-1:exon
so has part: feature:26471-26952:-1:exon

XP_041568919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27709-27729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27441-27584:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27024-27156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26471-26952:-1:exon

FLT3LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: FLT3LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fms-related tyrosine kinase 3 ligand isoform X1
translation: MPSNLEPDSVCSDLWGLHFGALALQRMLGVAGKDLAPLLRNLLAQLHFVAECHIQDPQRCVRLEMVNVSQLLETLVQHLGGLQGRPLHFPGCARLRCHPGPALTSPAVRHEGLLGAKQGPPSPAGHGLVLLGGVGVALGLVAVGWVLWRRPCAQVGTPGALRGTGDTGEDGVPGDAAGGEGTRGTGGGVCTGDTVDAGCRGDLGSTGGCCGDTGSTGGCLGVTGRRTDNTGSTRERWEVIPLSPPQPSQGPPTWEQDGT
SIO_010081: FLT3LG
subclass of: SO_0000673
so part of: FLT3LG
location: complement(join(26471..26952,27024..27156,27441..27584,27709..27729))
location: region:26471-27729:-1
so has part: feature:27709-27729:-1:exon
so has part: feature:27441-27584:-1:exon
so has part: feature:27024-27156:-1:exon
so has part: feature:26471-26952:-1:exon

XP_041568920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27709-27729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27441-27584:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:27024-27156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:26471-26952:-1:exon

ALDH16A1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ALDH16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(28705..35382)
location: region:28705-35382:-1
so has part: feature:28705-35382:-1:exon
subclass of: SO_0000010

121468827
type: Gene
SIO_000068: ncbigene

position:28705:-1
position: 28705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35382:-1
position: 35382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28705-35382:-1:exon

ALDH16A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ALDH16A1
product: aldehyde dehydrogenase 16 family member A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041712981.1
SIO_010081: ALDH16A1
subclass of: SO_0000673
so part of: ALDH16A1
location: complement(join(28705..28964,29161..29283,29557..29733,29808..29976,30069..30146,30408..30469,30691..30784,30867..31003,31078..31176,31533..31724,32125..32280,32375..32562,33024..33101,33277..33458,34117..34243,34719..34821,35173..35382))
location: region:28705-35382:-1
so has part: feature:35173-35382:-1:exon
so has part: feature:34719-34821:-1:exon
so has part: feature:34117-34243:-1:exon
so has part: feature:33277-33458:-1:exon
so has part: feature:33024-33101:-1:exon
so has part: feature:32375-32562:-1:exon
so has part: feature:32125-32280:-1:exon
so has part: feature:31533-31724:-1:exon
so has part: feature:31078-31176:-1:exon
so has part: feature:30867-31003:-1:exon
so has part: feature:30691-30784:-1:exon
so has part: feature:30408-30469:-1:exon
so has part: feature:30069-30146:-1:exon
so has part: feature:29808-29976:-1:exon
so has part: feature:29557-29733:-1:exon
so has part: feature:29161-29283:-1:exon
so has part: feature:28705-28964:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35173-35382:-1:exon

position:35173:-1
position: 35173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34719-34821:-1:exon

position:34719:-1
position: 34719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34821:-1
position: 34821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:34117-34243:-1:exon

position:34117:-1
position: 34117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34243:-1
position: 34243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:33277-33458:-1:exon

position:33277:-1
position: 33277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33458:-1
position: 33458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33024-33101:-1:exon

position:33024:-1
position: 33024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:33101:-1
position: 33101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:32375-32562:-1:exon

position:32375:-1
position: 32375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32562:-1
position: 32562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:32125-32280:-1:exon

position:32125:-1
position: 32125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32280:-1
position: 32280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:31533-31724:-1:exon

position:31533:-1
position: 31533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31724:-1
position: 31724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:31078-31176:-1:exon

position:31078:-1
position: 31078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31176:-1
position: 31176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:30867-31003:-1:exon

position:30867:-1
position: 30867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31003:-1
position: 31003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:30691-30784:-1:exon

position:30691:-1
position: 30691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30784:-1
position: 30784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:30408-30469:-1:exon

position:30408:-1
position: 30408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30469:-1
position: 30469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:30069-30146:-1:exon

position:30069:-1
position: 30069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30146:-1
position: 30146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:29808-29976:-1:exon

position:29808:-1
position: 29808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29976:-1
position: 29976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:29557-29733:-1:exon

position:29557:-1
position: 29557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29733:-1
position: 29733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:29161-29283:-1:exon

position:29161:-1
position: 29161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29283:-1
position: 29283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:28705-28964:-1:exon

position:28964:-1
position: 28964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALDH16A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ALDH16A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aldehyde dehydrogenase family 16 member A1
translation: MVTGRRSGHFRPVSVVLGPLWPVPPRLGGSSAAMAALAALGAPPVPEIFATMEEGPVPGEINAGEAWLQSHGRSLGHFVAGSWLKPPGRVSLTCPESSTGRPLAAVPAGDRSDVAVAVAAAAAAAEAWAGLGGPQRGQRLTRLAAALAGERRGAVGALLALAGGRPLCRTLGADLDVALRLLRAPAAAAELGPPGLEGWSPLGVVAVVLGGPCSLLALLWKLGPLLAMGNTAVVLCPAAAAPPLLLLAELSGEGAALPPGVLNVLVGPPELRPALRAHPEIASVTFLGLPQEELPALVWGSPCRGPRLGGPRGGRVVVVVLDSADLDSAAAALAASAAAPPALFPVGGCVVLAQDAVAAALERRLRARLGGLRLGDPTDPTTEVGPLPPGTCLPEEVVQEALQEGAQVFQVPLPPERGHRFYPPTLISGVAPTSRCLRDPTPGPLLVLLSMRSPTEAVAVASALPHTAAAAVWAQDITVALDTVDRLPQGLVWLNALDLLDPSGGCAGGAVDTDLDEALREFGCPPWEQPPKVDELLSPLVTVDDPGDPELAHAVAAARGAAPGWGRLPGAARARALRGAAAALAETPGTPGNGGGAHGDLRGALLRWAARLERGGGAIQDVPGGRALLARRPLGVVGVAWGWPRPLAPQLLLPPLALGNAVVVVAPPGGDGPAQQLRKALEAAGLPGGVLTVLPGNSWGSGSGLARHRPDGLWLCGGDADCDWASAVSVPRVWGVPAGLVGAPGQDPPPGAERELELRCTRPHCLWLPGGAP
SIO_010081: ALDH16A1
subclass of: SO_0000673
so part of: ALDH16A1
location: complement(join(28803..28964,29161..29283,29557..29733,29808..29976,30069..30146,30408..30469,30691..30784,30867..31003,31078..31176,31533..31724,32125..32280,32375..32562,33024..33101,33277..33458,34117..34243,34719..34821,35173..35367))
location: region:28803-35367:-1
so has part: feature:35173-35367:-1:exon
so has part: feature:34719-34821:-1:exon
so has part: feature:34117-34243:-1:exon
so has part: feature:33277-33458:-1:exon
so has part: feature:33024-33101:-1:exon
so has part: feature:32375-32562:-1:exon
so has part: feature:32125-32280:-1:exon
so has part: feature:31533-31724:-1:exon
so has part: feature:31078-31176:-1:exon
so has part: feature:30867-31003:-1:exon
so has part: feature:30691-30784:-1:exon
so has part: feature:30408-30469:-1:exon
so has part: feature:30069-30146:-1:exon
so has part: feature:29808-29976:-1:exon
so has part: feature:29557-29733:-1:exon
so has part: feature:29161-29283:-1:exon
so has part: feature:28803-28964:-1:exon

XP_041568915.1
type: Protein
SIO_000068: ncbiprotein

position:28803:-1
position: 28803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35367:-1
position: 35367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35173-35367:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34719-34821:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34117-34243:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33277-33458:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33024-33101:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32375-32562:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32125-32280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:31533-31724:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:31078-31176:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:30867-31003:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:30691-30784:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:30408-30469:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:30069-30146:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:29808-29976:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:29557-29733:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:29161-29283:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:28803-28964:-1:exon

PIH1D1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PIH1D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 35510..39080
location: region:35510-39080:1
so has part: feature:35510-39080:1:exon
subclass of: SO_0000010

115491793
type: Gene
SIO_000068: ncbigene

position:35510:1
position: 35510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39080:1
position: 39080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35510-39080:1:exon

PIH1D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PIH1D1
product: PIH1 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_041712983.1
SIO_010081: PIH1D1
subclass of: SO_0000673
so part of: PIH1D1
location: join(35510..35693,35789..35852,35959..36147,36672..36733,36816..36900,37416..37509,37583..37673,38170..38358,38479..39080)
location: region:35510-39080:1
so has part: feature:35510-35693:1:exon
so has part: feature:35789-35852:1:exon
so has part: feature:35959-36147:1:exon
so has part: feature:36672-36733:1:exon
so has part: feature:36816-36900:1:exon
so has part: feature:37416-37509:1:exon
so has part: feature:37583-37673:1:exon
so has part: feature:38170-38358:1:exon
so has part: feature:38479-39080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35510-35693:1:exon

position:35693:1
position: 35693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35789-35852:1:exon

position:35789:1
position: 35789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35852:1
position: 35852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35959-36147:1:exon

position:35959:1
position: 35959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36147:1
position: 36147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36672-36733:1:exon

position:36672:1
position: 36672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36733:1
position: 36733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:36816-36900:1:exon

position:36816:1
position: 36816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36900:1
position: 36900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:37416-37509:1:exon

position:37416:1
position: 37416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37509:1
position: 37509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:37583-37673:1:exon

position:37583:1
position: 37583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37673:1
position: 37673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:38170-38358:1:exon

position:38170:1
position: 38170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38358:1
position: 38358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:38479-39080:1:exon

position:38479:1
position: 38479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIH1D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PIH1D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PIH1 domain-containing protein 1
translation: MSDPSLLSAELEADEEEEAAALRRLLLQVPADREEPPRPGPARAVTPQPGLCVKTRAGGHKVFLNVCHSPAVPPPPPVPPPGLQQLLREPPGPDGAFRIPMSLGEPHAELDRGGRGCTAYDVVVNSDFFRTLQADPLYLEFFLTVAMEGLSEKYGLELELTDWRVLRNRKFLGSISAQNIRTRPRPHIQELPGPPEPPEFVVVAEPSAQHPKVLQARVHLPQVEGAGSLWLGLSEEQLLLFHPPPPGGAAEAAAGLPGQRGALLELGLPLPADPARCRARFHRRSKVLTVTMPLRA
SIO_010081: PIH1D1
subclass of: SO_0000673
so part of: PIH1D1
location: join(35610..35693,35789..35852,35959..36147,36672..36733,36816..36900,37416..37509,37583..37673,38170..38358,38479..38511)
location: region:35610-38511:1
so has part: feature:35610-35693:1:exon
so has part: feature:35789-35852:1:exon
so has part: feature:35959-36147:1:exon
so has part: feature:36672-36733:1:exon
so has part: feature:36816-36900:1:exon
so has part: feature:37416-37509:1:exon
so has part: feature:37583-37673:1:exon
so has part: feature:38170-38358:1:exon
so has part: feature:38479-38511:1:exon

XP_041568917.1
type: Protein
SIO_000068: ncbiprotein

position:35610:1
position: 35610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38511:1
position: 38511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35610-35693:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35789-35852:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35959-36147:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36672-36733:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:36816-36900:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37416-37509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:37583-37673:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38170-38358:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38479-38511:1:exon

SLC17A7
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SLC17A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 39237..46741
location: region:39237-46741:1
so has part: feature:39237-46741:1:exon
subclass of: SO_0000010

100220715
type: Gene
SIO_000068: ncbigene

position:39237:1
position: 39237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46741:1
position: 46741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39237-46741:1:exon

SLC17A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SLC17A7
product: solute carrier family 17 member 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_030260109.3
SIO_010081: SLC17A7
subclass of: SO_0000673
so part of: SLC17A7
location: join(39237..39389,40210..40432,41258..41376,41499..41613,42057..42144,42252..42338,42522..42661,43364..43510,43991..44123,44726..44836,45527..45654,46308..46741)
location: region:39237-46741:1
so has part: feature:39237-39389:1:exon
so has part: feature:40210-40432:1:exon
so has part: feature:41258-41376:1:exon
so has part: feature:41499-41613:1:exon
so has part: feature:42057-42144:1:exon
so has part: feature:42252-42338:1:exon
so has part: feature:42522-42661:1:exon
so has part: feature:43364-43510:1:exon
so has part: feature:43991-44123:1:exon
so has part: feature:44726-44836:1:exon
so has part: feature:45527-45654:1:exon
so has part: feature:46308-46741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39237-39389:1:exon

position:39389:1
position: 39389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40210-40432:1:exon

position:40210:1
position: 40210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40432:1
position: 40432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41258-41376:1:exon

position:41258:1
position: 41258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41376:1
position: 41376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:41499-41613:1:exon

position:41499:1
position: 41499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41613:1
position: 41613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:42057-42144:1:exon

position:42057:1
position: 42057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42144:1
position: 42144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:42252-42338:1:exon

position:42252:1
position: 42252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42338:1
position: 42338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:42522-42661:1:exon

position:42522:1
position: 42522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42661:1
position: 42661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:43364-43510:1:exon

position:43364:1
position: 43364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43510:1
position: 43510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:43991-44123:1:exon

position:43991:1
position: 43991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44123:1
position: 44123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:44726-44836:1:exon

position:44726:1
position: 44726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44836:1
position: 44836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:45527-45654:1:exon

position:45527:1
position: 45527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:45654:1
position: 45654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:46308-46741:1:exon

position:46308:1
position: 46308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC17A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SLC17A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicular glutamate transporter 1
translation: MEFNKEEFRRQLGAGLGRLHRFLERRQDDPEVLELSSGGAGPSAARPPVLDCTFCGLPRRYGIAILCGIGFCISFGIRCNLGVAVVSMVNPSHGQRAQFNWDPETVGMIHGSFFWGYIVTQIPGGFIAQKFAANRVFGLAIVSTSVLNMLIPSAARAHVGCVIAVRVMQGLVEGVTYPACHGIWSKWAPPLERSRLATTAFCGSYAGAVVAMPLAGVLVQYTGWSSVFYVYGSFGVLWYLFWVLVSYESPAQHPTISAEERKYIEESIGESAGSNPLLLATPWRHFFTSMPVYAIIVANFCRSWTFYLLLISQPAYFEEVFGFEISKVGLLSALPHLVMTIVVPIGGQIADLLRSRGLMSTTNVRKMMNCGGFGMEATLLLVVGYSHSRAVAISFLVLAVGFSGFAISGFNVNHLDIAPRYASVLMGLSNGVGTLSGMVCPLIVGALTRHKTREEWQWVFLIAALVHYGGVAFYGAFASGEPQPWAEPPREEAEPLAPTGDDEEEEEDEEGGVGPPGPPGGPPASYGATGTTPAPGTPLG
SIO_010081: SLC17A7
subclass of: SO_0000673
so part of: SLC17A7
location: join(39328..39389,40210..40432,41258..41376,41499..41613,42057..42144,42252..42338,42522..42661,43364..43510,43991..44123,44726..44836,45527..45654,46308..46577)
location: region:39328-46577:1
so has part: feature:39328-39389:1:exon
so has part: feature:40210-40432:1:exon
so has part: feature:41258-41376:1:exon
so has part: feature:41499-41613:1:exon
so has part: feature:42057-42144:1:exon
so has part: feature:42252-42338:1:exon
so has part: feature:42522-42661:1:exon
so has part: feature:43364-43510:1:exon
so has part: feature:43991-44123:1:exon
so has part: feature:44726-44836:1:exon
so has part: feature:45527-45654:1:exon
so has part: feature:46308-46577:1:exon

XP_030115969.3
type: Protein
SIO_000068: ncbiprotein

position:39328:1
position: 39328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46577:1
position: 46577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39328-39389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40210-40432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:41258-41376:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:41499-41613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:42057-42144:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:42252-42338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42522-42661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:43364-43510:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43991-44123:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44726-44836:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:45527-45654:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:46308-46577:1:exon

RPL13A
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RPL13A
note: ribosomal protein L13a; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 46996..50460
location: region:46996-50460:1
so has part: feature:46996-50460:1:exon
subclass of: SO_0000010

100223135
type: Gene
SIO_000068: ncbigene

position:46996:1
position: 46996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50460:1
position: 50460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46996-50460:1:exon

RPL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPL13A
product: ribosomal protein L13a
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001309500.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 10 substitutions, 3 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001309500.1
SIO_010081: RPL13A
subclass of: SO_0000673
so part of: RPL13A
location: join(46996..47047,47260..47332,47586..47651,48307..48408,48667..48752,49205..49264,49780..49902,50236..50455)
location: region:46996-50455:1
so has part: feature:46996-47047:1:exon
so has part: feature:47260-47332:1:exon
so has part: feature:47586-47651:1:exon
so has part: feature:48307-48408:1:exon
so has part: feature:48667-48752:1:exon
so has part: feature:49205-49264:1:exon
so has part: feature:49780-49902:1:exon
so has part: feature:50236-50455:1:exon

position:50455:1
position: 50455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46996-47047:1:exon

position:47047:1
position: 47047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47260-47332:1:exon

position:47260:1
position: 47260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47332:1
position: 47332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:47586-47651:1:exon

position:47586:1
position: 47586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47651:1
position: 47651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48307-48408:1:exon

position:48307:1
position: 48307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48408:1
position: 48408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48667-48752:1:exon

position:48667:1
position: 48667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48752:1
position: 48752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:49205-49264:1:exon

position:49205:1
position: 49205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49264:1
position: 49264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:49780-49902:1:exon

position:49780:1
position: 49780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49902:1
position: 49902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:50236-50455:1:exon

position:50236:1
position: 50236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPL13A
product: ribosomal protein L13a
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245758.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 8 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245758.1
SIO_010081: RPL13A
subclass of: SO_0000673
so part of: RPL13A
location: join(47001..47047,47260..47332,47586..47651,48307..48408,48667..48752,49205..49264,49780..49902,50236..50460)
location: region:47001-50460:1
so has part: feature:47001-47047:1:exon
so has part: feature:47260-47332:1:exon
so has part: feature:47586-47651:1:exon
so has part: feature:48307-48408:1:exon
so has part: feature:48667-48752:1:exon
so has part: feature:49205-49264:1:exon
so has part: feature:49780-49902:1:exon
so has part: feature:50236-50460:1:exon

position:47001:1
position: 47001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47001-47047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47260-47332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47586-47651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48307-48408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48667-48752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49205-49264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49780-49902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50236-50460:1:exon

RPL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPL13A
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: 60S ribosomal protein L13a
translation: MAEPRVLVIDGRGHLLGRLAAIVAKQVLLGRRVVVVRCEGINISGNFYRNKLKFLAFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKRKRMVVPAALKIIRLKPTRKFAVLGRLAHEVGWKYRDVTEALEEKRKEKAKIRYNKKRKMMSLRRRAERSAEKKAAPFTAVLRQHGILL
SIO_010081: RPL13A
subclass of: SO_0000673
so part of: RPL13A
location: join(47033..47047,47260..47332,47586..47651,48307..48408,48667..48752,49205..49264,49780..49902,50236..50322)
location: region:47033-50322:1
so has part: feature:47033-47047:1:exon
so has part: feature:47260-47332:1:exon
so has part: feature:47586-47651:1:exon
so has part: feature:48307-48408:1:exon
so has part: feature:48667-48752:1:exon
so has part: feature:49205-49264:1:exon
so has part: feature:49780-49902:1:exon
so has part: feature:50236-50322:1:exon

NP_001232687.1
type: Protein
SIO_000068: ncbiprotein

position:47033:1
position: 47033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50322:1
position: 50322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47033-47047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47260-47332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47586-47651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48307-48408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48667-48752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49205-49264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49780-49902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50236-50322:1:exon

RPL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPL13A
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: 60S ribosomal protein L13a
translation: MAEPRVLVIDGRGHLLGRLAAIVAKQVLLGRRVVVVRCEGINISGNFYRNKLKFLAFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKRKRMVVPAALKIIRLKPTRKFAVLGRLAHEVGWKYRDVTEALEEKRKEKAKIRYNKKRKMMSLRRRAERSAEKKAAPFTAVLRQHGILL
SIO_010081: RPL13A
subclass of: SO_0000673
so part of: RPL13A
location: join(47033..47047,47260..47332,47586..47651,48307..48408,48667..48752,49205..49264,49780..49902,50236..50322)
location: region:47033-50322:1
so has part: feature:47033-47047:1:exon
so has part: feature:47260-47332:1:exon
so has part: feature:47586-47651:1:exon
so has part: feature:48307-48408:1:exon
so has part: feature:48667-48752:1:exon
so has part: feature:49205-49264:1:exon
so has part: feature:49780-49902:1:exon
so has part: feature:50236-50322:1:exon

NP_001296429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:47033-47047:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:47260-47332:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47586-47651:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48307-48408:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48667-48752:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:49205-49264:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:49780-49902:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50236-50322:1:exon

LOC115491888
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115491888
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 47403..47481
location: region:47403-47481:1
so has part: feature:47403-47481:1:exon
subclass of: SO_0000578

115491888
type: Gene
SIO_000068: ncbigene

position:47403:1
position: 47403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47481:1
position: 47481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47403-47481:1:exon

LOC115491888
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: snoRNA
gene: LOC115491888
product: small nucleolar RNA Z195/SNORD33/SNORD32 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00133
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003957529.1
SIO_010081: LOC115491888
subclass of: SO_0000673
so part of: LOC115491888
location: 47403..47481
location: region:47403-47481:1
so has part: feature:47403-47481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:47403-47481:1:exon

LOC115491889
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115491889
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 49059..49127
location: region:49059-49127:1
so has part: feature:49059-49127:1:exon
subclass of: SO_0000578

115491889
type: Gene
SIO_000068: ncbigene

position:49059:1
position: 49059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49127:1
position: 49127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49059-49127:1:exon

LOC115491889
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: snoRNA
gene: LOC115491889
product: small nucleolar RNA SNORD34
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00147
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003957530.3
SIO_010081: LOC115491889
subclass of: SO_0000673
so part of: LOC115491889
location: 49059..49127
location: region:49059-49127:1
so has part: feature:49059-49127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49059-49127:1:exon

DHDH
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: DHDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(50385..55230)
location: region:50385-55230:-1
so has part: feature:50385-55230:-1:exon
subclass of: SO_0000010

115491770
type: Gene
SIO_000068: ncbigene

position:50385:-1
position: 50385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55230:-1
position: 55230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50385-55230:-1:exon

DHDH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: DHDH
product: dihydrodiol dehydrogenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_030260171.3
SIO_010081: DHDH
subclass of: SO_0000673
so part of: DHDH
location: complement(join(50385..50921,51145..51295,51719..51843,52308..52563,53272..53435,54211..54322,54964..55230))
location: region:50385-55230:-1
so has part: feature:54964-55230:-1:exon
so has part: feature:54211-54322:-1:exon
so has part: feature:53272-53435:-1:exon
so has part: feature:52308-52563:-1:exon
so has part: feature:51719-51843:-1:exon
so has part: feature:51145-51295:-1:exon
so has part: feature:50385-50921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54964-55230:-1:exon

position:54964:-1
position: 54964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54211-54322:-1:exon

position:54211:-1
position: 54211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54322:-1
position: 54322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53272-53435:-1:exon

position:53272:-1
position: 53272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53435:-1
position: 53435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52308-52563:-1:exon

position:52308:-1
position: 52308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52563:-1
position: 52563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51719-51843:-1:exon

position:51719:-1
position: 51719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51843:-1
position: 51843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:51145-51295:-1:exon

position:51145:-1
position: 51145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51295:-1
position: 51295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50385-50921:-1:exon

position:50921:-1
position: 50921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHDH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: DHDH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trans-1,2-dihydrobenzene-1,2-diol dehydrogenase
translation: MDPDVERDRDRDRDREPEPCPEPEPRGARPGPPPTRWGICGAGAISHDFVLALGTLPRSEHTVVAVAARDLGRAQTFARRLGVPRAYGSYEELAQDPDIDVVYVGTVNPTHLPAGLLFLRRGRAVLMEKPMALDAREVAQLVGTARERGVFLMEGFWTRFFPAWRRLRSLAAGGSLGSPLVLRGSLGFALGGVPRLREPALGGGALLDLGGYGVQAALALLGGGQGPPKLRAHGRLHPTGVDESVSVTLEFPGGGLAALLFSMAAELPGGAALGGPRGWAELPSHMNCPTELFWGGRCERFPLPPLAETPNFPHGAGLRFEAQHVRDCLLRGLTESPEMPLAESEVIARLLDEARAQVGVRLSGVTTDHLERPLTLPSDQRPPGVTTDPPE
SIO_010081: DHDH
subclass of: SO_0000673
so part of: DHDH
location: complement(join(50740..50921,51145..51295,51719..51843,52308..52563,53272..53435,54211..54322,54964..55149))
location: region:50740-55149:-1
so has part: feature:54964-55149:-1:exon
so has part: feature:54211-54322:-1:exon
so has part: feature:53272-53435:-1:exon
so has part: feature:52308-52563:-1:exon
so has part: feature:51719-51843:-1:exon
so has part: feature:51145-51295:-1:exon
so has part: feature:50740-50921:-1:exon

XP_030116031.3
type: Protein
SIO_000068: ncbiprotein

position:50740:-1
position: 50740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55149:-1
position: 55149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54964-55149:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54211-54322:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53272-53435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52308-52563:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51719-51843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:51145-51295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50740-50921:-1:exon

BCAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: BCAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 56521..65737
location: region:56521-65737:1
so has part: feature:56521-65737:1:exon
subclass of: SO_0000010

121468863
type: Gene
SIO_000068: ncbigene

position:56521:1
position: 56521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65737:1
position: 65737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56521-65737:1:exon

BCAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: BCAT2
product: branched chain amino acid transaminase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_041713052.1
SIO_010081: BCAT2
subclass of: SO_0000673
so part of: BCAT2
location: join(56521..56600,58546..58596,59302..59502,60332..60442,61312..61431,62038..62198,62861..63003,63708..63793,64523..64663,65031..65105,65652..65737)
location: region:56521-65737:1
so has part: feature:56521-56600:1:exon
so has part: feature:58546-58596:1:exon
so has part: feature:59302-59502:1:exon
so has part: feature:60332-60442:1:exon
so has part: feature:61312-61431:1:exon
so has part: feature:62038-62198:1:exon
so has part: feature:62861-63003:1:exon
so has part: feature:63708-63793:1:exon
so has part: feature:64523-64663:1:exon
so has part: feature:65031-65105:1:exon
so has part: feature:65652-65737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56521-56600:1:exon

position:56600:1
position: 56600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:58546-58596:1:exon

position:58546:1
position: 58546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58596:1
position: 58596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59302-59502:1:exon

position:59302:1
position: 59302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59502:1
position: 59502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60332-60442:1:exon

position:60332:1
position: 60332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60442:1
position: 60442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:61312-61431:1:exon

position:61312:1
position: 61312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61431:1
position: 61431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:62038-62198:1:exon

position:62038:1
position: 62038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62198:1
position: 62198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62861-63003:1:exon

position:62861:1
position: 62861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63003:1
position: 63003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:63708-63793:1:exon

position:63708:1
position: 63708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63793:1
position: 63793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:64523-64663:1:exon

position:64523:1
position: 64523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64663:1
position: 64663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:65031-65105:1:exon

position:65031:1
position: 65031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65105:1
position: 65105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:65652-65737:1:exon

position:65652:1
position: 65652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: BCAT2
product: branched chain amino acid transaminase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_041713053.1
SIO_010081: BCAT2
subclass of: SO_0000673
so part of: BCAT2
location: join(56521..56600,58546..58596,59302..59502,60332..60442,61312..61431,62038..62198,62861..63003,63708..63793,65031..65105,65652..65737)
location: region:56521-65737:1
so has part: feature:56521-56600:1:exon
so has part: feature:58546-58596:1:exon
so has part: feature:59302-59502:1:exon
so has part: feature:60332-60442:1:exon
so has part: feature:61312-61431:1:exon
so has part: feature:62038-62198:1:exon
so has part: feature:62861-63003:1:exon
so has part: feature:63708-63793:1:exon
so has part: feature:65031-65105:1:exon
so has part: feature:65652-65737:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56521-56600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58546-58596:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59302-59502:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60332-60442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61312-61431:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62038-62198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62861-63003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63708-63793:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:65031-65105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65652-65737:1:exon

BCAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: BCAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: branched-chain-amino-acid aminotransferase, mitochondrial isoform X1
translation: MAAAALRSRGGGAVMATLLRPRRGYKSTFLASELELQRSASPRAPPPPQELLFGKVFTDHMLTVEWSRSGGWGRPQIRPFQELRLHPAASALHYAVELFEGLKAFRGDDDKIRLFRPELNMERMQRSARRVCLPEFDGRELLECIRALVRLEGRWVPRDPRSSLYIRPTFIGTEPTLGVAPPGRALLFVLLCPVGPYFPGGFGPVRLLADPRHVRAWPGGAGHCKLGGNYGPCLELQEEARARGCQQVLWLHGPEQLLTEVGTMNLFVFWERPDGGLELVTPPLDGLILPGVTRQSLLELARQWGEFGVREAPLPMGSVLGALRAGRLREMFGAGTACVVCPVGEILYRDQLLAVPTMENGPEVATRFLRELSDIQYGRVPSPWATPV
SIO_010081: BCAT2
subclass of: SO_0000673
so part of: BCAT2
location: join(56562..56600,58546..58596,59302..59502,60332..60442,61312..61431,62038..62198,62861..63003,63708..63793,64523..64663,65031..65105,65652..65690)
location: region:56562-65690:1
so has part: feature:56562-56600:1:exon
so has part: feature:58546-58596:1:exon
so has part: feature:59302-59502:1:exon
so has part: feature:60332-60442:1:exon
so has part: feature:61312-61431:1:exon
so has part: feature:62038-62198:1:exon
so has part: feature:62861-63003:1:exon
so has part: feature:63708-63793:1:exon
so has part: feature:64523-64663:1:exon
so has part: feature:65031-65105:1:exon
so has part: feature:65652-65690:1:exon

XP_041568986.1
type: Protein
SIO_000068: ncbiprotein

position:56562:1
position: 56562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65690:1
position: 65690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56562-56600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58546-58596:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59302-59502:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60332-60442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61312-61431:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62038-62198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62861-63003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63708-63793:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:64523-64663:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65031-65105:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:65652-65690:1:exon

BCAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: BCAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: branched-chain-amino-acid aminotransferase, mitochondrial isoform X2
translation: MAAAALRSRGGGAVMATLLRPRRGYKSTFLASELELQRSASPRAPPPPQELLFGKVFTDHMLTVEWSRSGGWGRPQIRPFQELRLHPAASALHYAVELFEGLKAFRGDDDKIRLFRPELNMERMQRSARRVCLPEFDGRELLECIRALVRLEGRWVPRDPRSSLYIRPTFIGTEPTLGVAPPGRALLFVLLCPVGPYFPGGFGPVRLLADPRHVRAWPGGAGHCKLGGNYGPCLELQEEARARGCQQVLWLHGPEQLLTEVGTMNLFVFWERPDGGLELVTPPLDGLILPGVTRQSLLELARQWLLAVPTMENGPEVATRFLRELSDIQYGRVPSPWATPV
SIO_010081: BCAT2
subclass of: SO_0000673
so part of: BCAT2
location: join(56562..56600,58546..58596,59302..59502,60332..60442,61312..61431,62038..62198,62861..63003,63708..63793,65031..65105,65652..65690)
location: region:56562-65690:1
so has part: feature:56562-56600:1:exon
so has part: feature:58546-58596:1:exon
so has part: feature:59302-59502:1:exon
so has part: feature:60332-60442:1:exon
so has part: feature:61312-61431:1:exon
so has part: feature:62038-62198:1:exon
so has part: feature:62861-63003:1:exon
so has part: feature:63708-63793:1:exon
so has part: feature:65031-65105:1:exon
so has part: feature:65652-65690:1:exon

XP_041568987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:56562-56600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:58546-58596:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59302-59502:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60332-60442:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:61312-61431:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62038-62198:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:62861-63003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:63708-63793:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:65031-65105:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:65652-65690:1:exon

IL11
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: IL11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(67601..71819)
location: region:67601-71819:-1
so has part: feature:67601-71819:-1:exon
subclass of: SO_0000010

121468810
type: Gene
SIO_000068: ncbigene

position:67601:-1
position: 67601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71819:-1
position: 71819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67601-71819:-1:exon

IL11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: IL11
product: interleukin 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 36% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712955.1
SIO_010081: IL11
subclass of: SO_0000673
so part of: IL11
location: complement(join(67601..67768,68189..68347,69138..69224,69702..69883,71732..71819))
location: region:67601-71819:-1
so has part: feature:71732-71819:-1:exon
so has part: feature:69702-69883:-1:exon
so has part: feature:69138-69224:-1:exon
so has part: feature:68189-68347:-1:exon
so has part: feature:67601-67768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:71732-71819:-1:exon

position:71732:-1
position: 71732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69702-69883:-1:exon

position:69702:-1
position: 69702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69883:-1
position: 69883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:69138-69224:-1:exon

position:69138:-1
position: 69138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69224:-1
position: 69224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:68189-68347:-1:exon

position:68189:-1
position: 68189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68347:-1
position: 68347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:67601-67768:-1:exon

position:67768:-1
position: 67768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: IL11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-11
translation: MTRKCRPRTRVGEDRERATPVGRARGRFRGAPWRALLALLGLWPGLWPGPALALAPRPRPPPTDTRGDLDSVINLAKALLGDTKAFLELLKSRFPAEGEHKLDSLPVLAMSALELPNIQAAALLPRLGSDLLRYQRLLEWLRRAGGALRGLEPELAALRGRLERLRGRLDHLVSRLSLPRPPAPPPAPPPAQVRPWGAVRAAHAVARGLHLYLDWAARGLLLLRQRL
SIO_010081: IL11
subclass of: SO_0000673
so part of: IL11
location: complement(join(67601..67768,68189..68347,69138..69224,69702..69883,71732..71819))
location: region:67601-71819:-1
so has part: feature:71732-71819:-1:exon
so has part: feature:69702-69883:-1:exon
so has part: feature:69138-69224:-1:exon
so has part: feature:68189-68347:-1:exon
so has part: feature:67601-67768:-1:exon

XP_041568889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:71732-71819:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:69702-69883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69138-69224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68189-68347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:67601-67768:-1:exon

RASIP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RASIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 76413..87392
location: region:76413-87392:1
so has part: feature:76413-87392:1:exon
subclass of: SO_0000010

121468864
type: Gene
SIO_000068: ncbigene

position:76413:1
position: 76413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87392:1
position: 87392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76413-87392:1:exon

RASIP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RASIP1
product: Ras interacting protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041713054.1
SIO_010081: RASIP1
subclass of: SO_0000673
so part of: RASIP1
location: join(76413..76680,77044..77180,78283..78896,79938..80305,81614..82396,82965..83002,83155..83306,84076..84185,84724..84964,85747..85919,86217..86364,87067..87392)
location: region:76413-87392:1
so has part: feature:76413-76680:1:exon
so has part: feature:77044-77180:1:exon
so has part: feature:78283-78896:1:exon
so has part: feature:79938-80305:1:exon
so has part: feature:81614-82396:1:exon
so has part: feature:82965-83002:1:exon
so has part: feature:83155-83306:1:exon
so has part: feature:84076-84185:1:exon
so has part: feature:84724-84964:1:exon
so has part: feature:85747-85919:1:exon
so has part: feature:86217-86364:1:exon
so has part: feature:87067-87392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:76413-76680:1:exon

position:76680:1
position: 76680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77044-77180:1:exon

position:77044:1
position: 77044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77180:1
position: 77180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:78283-78896:1:exon

position:78283:1
position: 78283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78896:1
position: 78896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:79938-80305:1:exon

position:79938:1
position: 79938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80305:1
position: 80305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81614-82396:1:exon

position:81614:1
position: 81614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82396:1
position: 82396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:82965-83002:1:exon

position:82965:1
position: 82965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83002:1
position: 83002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:83155-83306:1:exon

position:83155:1
position: 83155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83306:1
position: 83306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:84076-84185:1:exon

position:84076:1
position: 84076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84185:1
position: 84185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:84724-84964:1:exon

position:84724:1
position: 84724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84964:1
position: 84964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:85747-85919:1:exon

position:85747:1
position: 85747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85919:1
position: 85919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:86217-86364:1:exon

position:86217:1
position: 86217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86364:1
position: 86364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:87067-87392:1:exon

position:87067:1
position: 87067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RASIP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RASIP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-interacting protein 1
translation: MLPEERKEGSPRFGKLHFPVGLWINSPKKRLAKMSRRWPSAGSVRSTSSDTPSRASDPSDPRPTAKPKPPRHKRLSHLFHRATGTTPGTSTGTTGTSGRWASEKKLSELREPPGEPLGAAAGPQQPPCILKIFGGAISRGANYKSVLATPRSSARQLVREALERYGLDPDDFGQFALCDVVGRPGGAAGGGGGGGGGGWQGEHLREVGDWERPLVLQELWKPKAGWSRRFEIRRRQDLERAADDDGDSAGLPAQPRRLHRNRSRAASGGPAAPARDPRDPRDPRDPAPAMRRSISDMNLSTRRRQRKALSLAGGDTAAGTPPAGPPGPPGTPPDTGTPPGDGGPSLELLSQCLIQPPRDRPYFLLLQGYGKEDFVLYVMTRPQHIFGRPERRGGPDKPGGCPETPPPTPETPDAPPKSDSGPFSVVDTFLSAPDILPRHCLVQTGPGAGGDPGGDPPSATVRPFRGAPATLNGSPLLRRAPLNPGDLLGLGEHVLLLYKDPRLGEGARPPWLPAPRAAPGLLGVLGCAGCGRSPRERRDALRDALQSPRAELRYRPQDEGTLLRDILDMELGGGPGGENGEGSPGGDPGEDLGVLAPAFLLGLCLDHAAREFPAGHFPELLGKVAGMLRETVWEKIKEIGDRQPESPPDGDPPPALDLAGVSSDLRPLLLWLANAVELLNLAQGHLQGLERELDLEGPCPELERDLERCDEALGVLDEVIMSTFQQSVYYLTKTLYSALPALLDTNPFVGAGEPRAGPDLGGVPEGLRPPLAVFGAVLALSRRCRLHPELTSQTFGYLFFFSNASLFNTLMEKGSAGPFFQWWVGVRLRTNLDLLLDGLSALGLGDIAGDFFRKLSATANLLSTPRGCLEQATWARLRAEFPALSPAQLHHVLRHYRLGRGRAAPPAWSPGPEESAAAATGDIFESFSEHPPLLLPTRGFRLGRGVPGGLLRPLLQIRQRLWELEGGGADP
SIO_010081: RASIP1
subclass of: SO_0000673
so part of: RASIP1
location: join(77047..77180,78283..78896,79938..80305,81614..82396,82965..83002,83155..83306,84076..84185,84724..84964,85747..85919,86217..86364,87067..87221)
location: region:77047-87221:1
so has part: feature:77047-77180:1:exon
so has part: feature:78283-78896:1:exon
so has part: feature:79938-80305:1:exon
so has part: feature:81614-82396:1:exon
so has part: feature:82965-83002:1:exon
so has part: feature:83155-83306:1:exon
so has part: feature:84076-84185:1:exon
so has part: feature:84724-84964:1:exon
so has part: feature:85747-85919:1:exon
so has part: feature:86217-86364:1:exon
so has part: feature:87067-87221:1:exon

XP_041568988.1
type: Protein
SIO_000068: ncbiprotein

position:77047:1
position: 77047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87221:1
position: 87221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:77047-77180:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78283-78896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79938-80305:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81614-82396:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:82965-83002:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83155-83306:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:84076-84185:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84724-84964:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85747-85919:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:86217-86364:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:87067-87221:1:exon

LOC121468873
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(88506..90494)
location: region:88506-90494:-1
so has part: feature:88506-90494:-1:exon
subclass of: SO_0000010

121468873
type: Gene
SIO_000068: ncbigene

position:88506:-1
position: 88506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90494:-1
position: 90494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88506-90494:-1:exon

LOC121468873
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468873
product: transcription factor SKN7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041713065.1
SIO_010081: LOC121468873
subclass of: SO_0000673
so part of: LOC121468873
location: complement(join(88506..88584,89274..89409,90282..90494))
location: region:88506-90494:-1
so has part: feature:90282-90494:-1:exon
so has part: feature:89274-89409:-1:exon
so has part: feature:88506-88584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90282-90494:-1:exon

position:90282:-1
position: 90282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89274-89409:-1:exon

position:89274:-1
position: 89274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89409:-1
position: 89409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88506-88584:-1:exon

position:88584:-1
position: 88584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468873
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468873
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SKN7-like
translation: MRGPGGRAGSELRFNVSVLPRPRVPGAAPPPPAAPPGGLPPAAVAAIAVTTIATALVAAGIAWFCFRRAGPRPPPNNGPATPPQ
SIO_010081: LOC121468873
subclass of: SO_0000673
so part of: LOC121468873
location: complement(join(88518..88584,89274..89409,90282..90333))
location: region:88518-90333:-1
so has part: feature:90282-90333:-1:exon
so has part: feature:89274-89409:-1:exon
so has part: feature:88518-88584:-1:exon

XP_041568999.1
type: Protein
SIO_000068: ncbiprotein

position:88518:-1
position: 88518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90333:-1
position: 90333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90282-90333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89274-89409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88518-88584:-1:exon

ISOC2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ISOC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96835..100625
location: region:96835-100625:1
so has part: feature:96835-100625:1:exon
subclass of: SO_0000010

121468865
type: Gene
SIO_000068: ncbigene

position:96835:1
position: 96835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100625:1
position: 100625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96835-100625:1:exon

ISOC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ISOC2
product: isochorismatase domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_041713055.1
SIO_010081: ISOC2
subclass of: SO_0000673
so part of: ISOC2
location: join(96835..97027,97696..97902,98870..98940,99461..99578,100178..100625)
location: region:96835-100625:1
so has part: feature:96835-97027:1:exon
so has part: feature:97696-97902:1:exon
so has part: feature:98870-98940:1:exon
so has part: feature:99461-99578:1:exon
so has part: feature:100178-100625:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96835-97027:1:exon

position:97027:1
position: 97027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97696-97902:1:exon

position:97696:1
position: 97696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97902:1
position: 97902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98870-98940:1:exon

position:98870:1
position: 98870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98940:1
position: 98940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:99461-99578:1:exon

position:99461:1
position: 99461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99578:1
position: 99578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100178-100625:1:exon

position:100178:1
position: 100178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ISOC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ISOC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: isochorismatase domain-containing protein 2
translation: MAARPGWPLPGSSALLVCDLQERFRGSVAAFPQIVAVAARLLQGCRILGVPALVAEQRPEVLGRTVPELGAQDLPRVPKSAFSMAGAAAPLLGDPKIRAVLLCGIEAHACVLQTALELLAEGLEVHVAADAVSSRSQVDRALALARMRQAGAYLSTCESLLLLLLRDSAHPKFPQILPLIKEPPPDTGLILGGALGALGEP
SIO_010081: ISOC2
subclass of: SO_0000673
so part of: ISOC2
location: join(96899..97027,97696..97902,98870..98940,99461..99578,100178..100258)
location: region:96899-100258:1
so has part: feature:96899-97027:1:exon
so has part: feature:97696-97902:1:exon
so has part: feature:98870-98940:1:exon
so has part: feature:99461-99578:1:exon
so has part: feature:100178-100258:1:exon

XP_041568989.1
type: Protein
SIO_000068: ncbiprotein

position:96899:1
position: 96899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100258:1
position: 100258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96899-97027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97696-97902:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98870-98940:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99461-99578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100178-100258:1:exon

SHISA7
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: SHISA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 103964..110065
location: region:103964-110065:1
so has part: feature:103964-110065:1:exon
subclass of: SO_0000010

121468862
type: Gene
SIO_000068: ncbigene

position:103964:1
position: 103964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110065:1
position: 110065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103964-110065:1:exon

SHISA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: SHISA7
product: shisa family member 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_041713051.1
SIO_010081: SHISA7
subclass of: SO_0000673
so part of: SHISA7
location: join(103964..105637,106797..106936,107568..107624,108462..108590,109521..110065)
location: region:103964-110065:1
so has part: feature:103964-105637:1:exon
so has part: feature:106797-106936:1:exon
so has part: feature:107568-107624:1:exon
so has part: feature:108462-108590:1:exon
so has part: feature:109521-110065:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103964-105637:1:exon

position:105637:1
position: 105637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:106797-106936:1:exon

position:106797:1
position: 106797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106936:1
position: 106936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107568-107624:1:exon

position:107568:1
position: 107568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107624:1
position: 107624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:108462-108590:1:exon

position:108462:1
position: 108462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108590:1
position: 108590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109521-110065:1:exon

position:109521:1
position: 109521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHISA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: SHISA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-7
translation: MPRDSPEPRDPPAPRDSAELRDSPEPRDPPAPRDPPEPRDHPKPRDSRKPRDSPEPRDPPAPRDPPEPRDPPKPRDPPVARDPPPVSRDSPELCHGYYDVMGHYDAAFNCSTGAFRFCCGTCSYRFCCEHRARRLEQRRCGNARSPPWARTAAPAPSAGAGTGTGTGAGTGGLRGAALAAGAPGGVPYVVCGVVSAALAAAVGARAAWGRAQRGDRAAAAQRERGRALVDVLRHQAGSGPGARPERRSSCGVLPPPPPDAGPPRPPKNLYGPESGYAHRGFGTPEHRGGGLDWRVPPPAPLSCSRSFHNLSHPPPPYESPPRADGARWASLRRLADRDLEDFGGPWGPPWGAPHPPRGTLPLPPPRGRRVLSQEFLGGGFGGGTLPRNRPRRPPLSHAASQSSLGPGGGAGGAGGVASPPPPLPHHHPPPPGTPFSPPPQPGGVGGRRAVFGAQRQNTAELQLLPGPPPPPTAPPPPAPPPPPPPQQQPPPLPPHRLRTGSRTEVTV
SIO_010081: SHISA7
subclass of: SO_0000673
so part of: SHISA7
location: join(104961..105637,106797..106936,107568..107624,108462..108590,109521..110041)
location: region:104961-110041:1
so has part: feature:104961-105637:1:exon
so has part: feature:106797-106936:1:exon
so has part: feature:107568-107624:1:exon
so has part: feature:108462-108590:1:exon
so has part: feature:109521-110041:1:exon

XP_041568985.1
type: Protein
SIO_000068: ncbiprotein

position:104961:1
position: 104961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110041:1
position: 110041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104961-105637:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:106797-106936:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107568-107624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:108462-108590:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:109521-110041:1:exon

UBE2S
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: UBE2S
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113093..121647
location: region:113093-121647:1
so has part: feature:113093-121647:1:exon
subclass of: SO_0000010

121468849
type: Gene
SIO_000068: ncbigene

position:113093:1
position: 113093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121647:1
position: 121647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113093-121647:1:exon

UBE2S
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBE2S
product: ubiquitin conjugating enzyme E2 S, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041713021.1
SIO_010081: UBE2S
subclass of: SO_0000673
so part of: UBE2S
location: join(113093..113608,114644..114667,116841..116988,118027..118217,120770..121128,121255..121647)
location: region:113093-121647:1
so has part: feature:113093-113608:1:exon
so has part: feature:114644-114667:1:exon
so has part: feature:116841-116988:1:exon
so has part: feature:118027-118217:1:exon
so has part: feature:120770-121128:1:exon
so has part: feature:121255-121647:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113093-113608:1:exon

position:113608:1
position: 113608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114644-114667:1:exon

position:114644:1
position: 114644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114667:1
position: 114667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116841-116988:1:exon

position:116841:1
position: 116841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116988:1
position: 116988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:118027-118217:1:exon

position:118027:1
position: 118027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118217:1
position: 118217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:120770-121128:1:exon

position:120770:1
position: 120770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121128:1
position: 121128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:121255-121647:1:exon

position:121255:1
position: 121255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2S
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: UBE2S
product: ubiquitin conjugating enzyme E2 S, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_041713020.1
SIO_010081: UBE2S
subclass of: SO_0000673
so part of: UBE2S
location: join(113397..113608,114644..114667,116841..116988,118027..118217,120770..121125,121294..121647)
location: region:113397-121647:1
so has part: feature:113397-113608:1:exon
so has part: feature:114644-114667:1:exon
so has part: feature:116841-116988:1:exon
so has part: feature:118027-118217:1:exon
so has part: feature:120770-121125:1:exon
so has part: feature:121294-121647:1:exon

position:113397:1
position: 113397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113397-113608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114644-114667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116841-116988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118027-118217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120770-121125:1:exon

position:121125:1
position: 121125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:121294-121647:1:exon

position:121294:1
position: 121294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2S
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBE2S
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 S
translation: MEPRGGAWQTPEAENLPPAALRLLCREVALLSADPPDGIRLFPNEQDLSDLQVLIEGPEGTPYAGGLFRMKLVLGKDFPAAPPKGFFLTKIFHPNVGPSGEICVNVLKRDWSAELGLRHVLLTIKCLLIQPNPESALNEEAARLLLEDFERFAARARLLTEIHARDPRPAPRPDPRPAPRPDPRPDPRPPPGPSAPPPAPPDGPQPKKHAGDRKGPPPPKKKGAGGDKKRALRRL
SIO_010081: UBE2S
subclass of: SO_0000673
so part of: UBE2S
location: join(113606..113608,114644..114667,116841..116988,118027..118217,120770..121111)
location: region:113606-121111:1
so has part: feature:113606-113608:1:exon
so has part: feature:114644-114667:1:exon
so has part: feature:116841-116988:1:exon
so has part: feature:118027-118217:1:exon
so has part: feature:120770-121111:1:exon

XP_041568954.1
type: Protein
SIO_000068: ncbiprotein

position:113606:1
position: 113606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121111:1
position: 121111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113606-113608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114644-114667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116841-116988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118027-118217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120770-121111:1:exon

UBE2S
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: UBE2S
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 S
translation: MEPRGGAWQTPEAENLPPAALRLLCREVALLSADPPDGIRLFPNEQDLSDLQVLIEGPEGTPYAGGLFRMKLVLGKDFPAAPPKGFFLTKIFHPNVGPSGEICVNVLKRDWSAELGLRHVLLTIKCLLIQPNPESALNEEAARLLLEDFERFAARARLLTEIHARDPRPAPRPDPRPAPRPDPRPDPRPPPGPSAPPPAPPDGPQPKKHAGDRKGPPPPKKKGAGGDKKRALRRL
SIO_010081: UBE2S
subclass of: SO_0000673
so part of: UBE2S
location: join(113606..113608,114644..114667,116841..116988,118027..118217,120770..121111)
location: region:113606-121111:1
so has part: feature:113606-113608:1:exon
so has part: feature:114644-114667:1:exon
so has part: feature:116841-116988:1:exon
so has part: feature:118027-118217:1:exon
so has part: feature:120770-121111:1:exon

XP_041568955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113606-113608:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114644-114667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:116841-116988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118027-118217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:120770-121111:1:exon

RCVRN
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RCVRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 123317..128180
location: region:123317-128180:1
so has part: feature:123317-128180:1:exon
subclass of: SO_0000010

121468868
type: Gene
SIO_000068: ncbigene

position:123317:1
position: 123317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128180:1
position: 128180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123317-128180:1:exon

RCVRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RCVRN
product: recoverin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041713060.1
SIO_010081: RCVRN
subclass of: SO_0000673
so part of: RCVRN
location: join(123317..123353,124722..125149,126959..127070,127988..128180)
location: region:123317-128180:1
so has part: feature:123317-123353:1:exon
so has part: feature:124722-125149:1:exon
so has part: feature:126959-127070:1:exon
so has part: feature:127988-128180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123317-123353:1:exon

position:123353:1
position: 123353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:124722-125149:1:exon

position:124722:1
position: 124722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125149:1
position: 125149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:126959-127070:1:exon

position:126959:1
position: 126959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127070:1
position: 127070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:127988-128180:1:exon

position:127988:1
position: 127988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RCVRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RCVRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: recoverin
translation: MGNARSGALSKEVLEELKTSTRYSEEELCRWYESFQRQCPDGRISRAEFEKIYGTFFPNSDPQGYARHVFRSFDTNDDGTLDFREYIIALHLTSSGRTHLKLEWAFSLFDVDRNGEVSKGEVLEIITAIFKMIPAEEQKLLPEDENSPQKRADKLWAYFNKGENDKIAEGEFIEGVMKNDAIMRLIQYEPKK
SIO_010081: RCVRN
subclass of: SO_0000673
so part of: RCVRN
location: join(124769..125149,126959..127070,127988..128073)
location: region:124769-128073:1
so has part: feature:124769-125149:1:exon
so has part: feature:126959-127070:1:exon
so has part: feature:127988-128073:1:exon

XP_041568994.1
type: Protein
SIO_000068: ncbiprotein

position:124769:1
position: 124769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128073:1
position: 128073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124769-125149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126959-127070:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127988-128073:1:exon

RPL18
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RPL18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(129275..138331)
location: region:129275-138331:-1
so has part: feature:129275-138331:-1:exon
subclass of: SO_0000010

121468858
type: Gene
SIO_000068: ncbigene

position:129275:-1
position: 129275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138331:-1
position: 138331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129275-138331:-1:exon

RPL18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPL18
product: ribosomal protein L18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 50 ESTs, 4 long SRA reads, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 140 samples with support for all annotated introns
transcript id: XM_041713037.1
SIO_010081: RPL18
subclass of: SO_0000673
so part of: RPL18
location: complement(join(129275..129405,130962..131031,132475..132598,134551..134649,136031..136138,137832..137918,138069..138331))
location: region:129275-138331:-1
so has part: feature:138069-138331:-1:exon
so has part: feature:137832-137918:-1:exon
so has part: feature:136031-136138:-1:exon
so has part: feature:134551-134649:-1:exon
so has part: feature:132475-132598:-1:exon
so has part: feature:130962-131031:-1:exon
so has part: feature:129275-129405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138069-138331:-1:exon

position:138069:-1
position: 138069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:137832-137918:-1:exon

position:137832:-1
position: 137832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137918:-1
position: 137918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:136031-136138:-1:exon

position:136031:-1
position: 136031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136138:-1
position: 136138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:134551-134649:-1:exon

position:134551:-1
position: 134551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134649:-1
position: 134649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132475-132598:-1:exon

position:132475:-1
position: 132475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132598:-1
position: 132598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:130962-131031:-1:exon

position:130962:-1
position: 130962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131031:-1
position: 131031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:129275-129405:-1:exon

position:129405:-1
position: 129405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPL18
product: ribosomal protein L18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_041713038.1
SIO_010081: RPL18
subclass of: SO_0000673
so part of: RPL18
location: complement(join(129275..129405,130962..131031,132475..132598,134551..134649,135707..135734,136059..136138,137832..137918,138069..138193))
location: region:129275-138193:-1
so has part: feature:138069-138193:-1:exon
so has part: feature:137832-137918:-1:exon
so has part: feature:136059-136138:-1:exon
so has part: feature:135707-135734:-1:exon
so has part: feature:134551-134649:-1:exon
so has part: feature:132475-132598:-1:exon
so has part: feature:130962-131031:-1:exon
so has part: feature:129275-129405:-1:exon

position:138193:-1
position: 138193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138069-138193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137832-137918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136059-136138:-1:exon

position:136059:-1
position: 136059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135707-135734:-1:exon

position:135707:-1
position: 135707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135734:-1
position: 135734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:134551-134649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132475-132598:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130962-131031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129275-129405:-1:exon

RPL18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPL18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L18 isoform X2
translation: MGIDIRHDKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNAPFNRVVLKRLFMSRSNRPPLALSRLIRMMRKPGRAGSTAVVVGTVTDDVRIQDVPKLKVCALRVTRGARTRILRAGGSILTFDQLAMASPKGKGTVLLSGPRKAREVFRHFGKAPGTPHSHTKPYVRSKGPKFERARGRRASRGYKN
SIO_010081: RPL18
subclass of: SO_0000673
so part of: RPL18
location: complement(join(129330..129405,130962..131031,132475..132598,134551..134649,135707..135734,136059..136138,137832..137918,138069..138071))
location: region:129330-138071:-1
so has part: feature:138069-138071:-1:exon
so has part: feature:137832-137918:-1:exon
so has part: feature:136059-136138:-1:exon
so has part: feature:135707-135734:-1:exon
so has part: feature:134551-134649:-1:exon
so has part: feature:132475-132598:-1:exon
so has part: feature:130962-131031:-1:exon
so has part: feature:129330-129405:-1:exon

XP_041568972.1
type: Protein
SIO_000068: ncbiprotein

position:129330:-1
position: 129330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138071:-1
position: 138071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138069-138071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137832-137918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136059-136138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135707-135734:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:134551-134649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132475-132598:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:130962-131031:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129330-129405:-1:exon

RPL18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPL18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L18 isoform X1
translation: MGIDIRHDKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNAPFNRVVLKRLFMSRSNRPPLALSRLIRMMRKPGRAGSTAVVVGTVTDDVRIQDVPKLKVCALRVTRGARTRILRAGGSILTFDQLAMASPKGKGTVLLSGPRKAREVFRHFGKAPGTPHSHTKPYVRSKGPKFERARGRRASRGYKN
SIO_010081: RPL18
subclass of: SO_0000673
so part of: RPL18
location: complement(join(129330..129405,130962..131031,132475..132598,134551..134649,136031..136138,137832..137918,138069..138071))
location: region:129330-138071:-1
so has part: feature:138069-138071:-1:exon
so has part: feature:137832-137918:-1:exon
so has part: feature:136031-136138:-1:exon
so has part: feature:134551-134649:-1:exon
so has part: feature:132475-132598:-1:exon
so has part: feature:130962-131031:-1:exon
so has part: feature:129330-129405:-1:exon

XP_041568971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:138069-138071:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137832-137918:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:136031-136138:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:134551-134649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132475-132598:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:130962-131031:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129330-129405:-1:exon

LOC121468811
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(140788..148187)
location: region:140788-148187:-1
so has part: feature:140788-148187:-1:exon
subclass of: SO_0000010

121468811
type: Gene
SIO_000068: ncbigene

position:140788:-1
position: 140788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148187:-1
position: 148187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140788-148187:-1:exon

LOC121468811
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468811
product: D-box binding PAR bZIP transcription factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712956.1
SIO_010081: LOC121468811
subclass of: SO_0000673
so part of: LOC121468811
location: complement(join(140788..141049,143904..144031,144086..144143,145340..145523,147532..147661,148133..148187))
location: region:140788-148187:-1
so has part: feature:148133-148187:-1:exon
so has part: feature:147532-147661:-1:exon
so has part: feature:145340-145523:-1:exon
so has part: feature:144086-144143:-1:exon
so has part: feature:143904-144031:-1:exon
so has part: feature:140788-141049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148133-148187:-1:exon

position:148133:-1
position: 148133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:147532-147661:-1:exon

position:147532:-1
position: 147532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147661:-1
position: 147661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145340-145523:-1:exon

position:145340:-1
position: 145340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145523:-1
position: 145523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:144086-144143:-1:exon

position:144086:-1
position: 144086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144143:-1
position: 144143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:143904-144031:-1:exon

position:143904:-1
position: 143904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144031:-1
position: 144031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140788-141049:-1:exon

position:141049:-1
position: 141049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468811
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468811
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D site-binding protein
translation: MAAPHKMAAAALNKDGGRWGVASGEGARGLAGGEKGAGLASGHASSREQRDRTGESGRDRSRMEEPGGGCAGPWGPPGAGGGPELELVDLDEFLREHGGLPPSPPPGPPTLLRPGNGGGEWGGPGPPRAPPEAPPEAEGPGGGPGGGPGGPAPLDPRRLRFTQEELRPQPLGRKARKVLVPEEQKDEKYWRRRWRNNAAAQRSREARRLKENQISVRAAFLERENAALRVEVAAARRDLLRLRGLLARYEARHGQI
SIO_010081: LOC121468811
subclass of: SO_0000673
so part of: LOC121468811
location: complement(join(140834..141049,143904..144031,144086..144143,145340..145523,147532..147661,148133..148187))
location: region:140834-148187:-1
so has part: feature:148133-148187:-1:exon
so has part: feature:147532-147661:-1:exon
so has part: feature:145340-145523:-1:exon
so has part: feature:144086-144143:-1:exon
so has part: feature:143904-144031:-1:exon
so has part: feature:140834-141049:-1:exon

XP_041568890.1
type: Protein
SIO_000068: ncbiprotein

position:140834:-1
position: 140834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148133-148187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:147532-147661:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145340-145523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144086-144143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:143904-144031:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140834-141049:-1:exon

ZNF865
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: ZNF865
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 148623..151962
location: region:148623-151962:1
so has part: feature:148623-151962:1:exon
subclass of: SO_0000010

121468812
type: Gene
SIO_000068: ncbigene

position:148623:1
position: 148623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151962:1
position: 151962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148623-151962:1:exon

ZNF865
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: ZNF865
product: zinc finger protein 865
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712957.1
SIO_010081: ZNF865
subclass of: SO_0000673
so part of: ZNF865
location: join(148623..148791,148986..151962)
location: region:148623-151962:1
so has part: feature:148623-148791:1:exon
so has part: feature:148986-151962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:148623-148791:1:exon

position:148791:1
position: 148791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148986-151962:1:exon

position:148986:1
position: 148986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF865
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: ZNF865
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: zinc finger protein 865
translation: MEANVSDESGPFPSYPFDFLDFLTHQQRPEPPEPFEPPPKPLPLPPGPFEFPSPFPRWGLLPLPPLGHRGPLGPPAPPGRPQTRRRHRGGPPVSPGTAPDPGEERGYFRRLKFLVERRFGAAGHRGARPGAAPAHAEGRPYECRTCGRTYSHGSSLVRHRRCHRHGADEATGSGGVNAAANGANGVNAAANGVNSVVGVNAAANRVNVAANGVNATANGVNVAPNGVNSIIGVNVAANRVNASTNGVITAANGVNTVANGVNVANGVNAVVNVNAVVNRVNTAANGVNVSANGVNTAVNVNPAPNGVNTSTNGVNVVASGVNTVANVNTAANGVNVAPNGVNTAGRINTVAGGVNVANGVNVAPNGVNAAPNGVNGVNATPNGANVLANLPAAPNGPNPLPLALNAAPNAVPGGVGLVAPGVAVAVPNAVIPVAGGVLLAAPGAAEGPLSCPLCWKAFKKPSHLAQHQIIHTGEKPFACAACGRAFNRRESLTRHVKTHAGPRRVPCGVCGKEFRDAAYLLRHQASHGAPRPAHRCDVCGKAYAAPQSLLRHRRAHGEGDNTGSATRHHNGTEWWRSFVCGVCGRGFGRRETLRRHERIHTGEKPHECGVCGKRFRESFHLRKHRVVHTRERPYRCEVCGKAFGYPQSLTRHRQVHRVPTAEATPTPTAALGCQSCGRRLPELLRAAALKDAVTVTATSPRGCEACGQVFGFLENLVWHRLARPVPAEAPSPTEVPPAVPNAGRFSCGTCGQSFKRFLALVTHKYVHLSASRPRSCAACGRRCAGAYELLLHRRRHLRRRPRRCGGCDRRFWALALLRRHRRVCPARRRPFRCRACGRAFPRAPLLRRHRARHAATRCPLCAKRCAGAAGLAEHQRRHGPARPRRCRTCGETFRYRGNLLEHRRRHLGEDVYRCERCGKSFFYLGSIARHLRAHRRRPRCPRCRRRFPRAAMLRRHLHGHGAAPGCQREGTEGRRGRRDGREREVMGWRGKGGWRDVAEKWHKMGQNGSKMGPKWQKMGQKWAKNGNEWAKMAENGPKMVINRSKSP
SIO_010081: ZNF865
subclass of: SO_0000673
so part of: ZNF865
location: join(148623..148791,148986..151962)
location: region:148623-151962:1
so has part: feature:148623-148791:1:exon
so has part: feature:148986-151962:1:exon

XP_041568891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:148623-148791:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:148986-151962:1:exon

U2AF2
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: U2AF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 154161..173242
location: region:154161-173242:1
so has part: feature:154161-173242:1:exon
subclass of: SO_0000010

121468845
type: Gene
SIO_000068: ncbigene

position:154161:1
position: 154161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173242:1
position: 173242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154161-173242:1:exon

U2AF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: U2AF2
product: U2 small nuclear RNA auxiliary factor 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_041713010.1
SIO_010081: U2AF2
subclass of: SO_0000673
so part of: U2AF2
location: join(154161..154381,156545..156680,159262..159291,160080..160184,160916..161067,162729..162844,164102..164240,165269..165348,166243..166365,167811..167897,169551..169799,172723..172861,172908..173242)
location: region:154161-173242:1
so has part: feature:154161-154381:1:exon
so has part: feature:156545-156680:1:exon
so has part: feature:159262-159291:1:exon
so has part: feature:160080-160184:1:exon
so has part: feature:160916-161067:1:exon
so has part: feature:162729-162844:1:exon
so has part: feature:164102-164240:1:exon
so has part: feature:165269-165348:1:exon
so has part: feature:166243-166365:1:exon
so has part: feature:167811-167897:1:exon
so has part: feature:169551-169799:1:exon
so has part: feature:172723-172861:1:exon
so has part: feature:172908-173242:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:154161-154381:1:exon

position:154381:1
position: 154381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:156545-156680:1:exon

position:156545:1
position: 156545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156680:1
position: 156680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:159262-159291:1:exon

position:159262:1
position: 159262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159291:1
position: 159291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:160080-160184:1:exon

position:160080:1
position: 160080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160184:1
position: 160184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160916-161067:1:exon

position:160916:1
position: 160916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161067:1
position: 161067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:162729-162844:1:exon

position:162729:1
position: 162729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162844:1
position: 162844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:164102-164240:1:exon

position:164102:1
position: 164102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164240:1
position: 164240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:165269-165348:1:exon

position:165269:1
position: 165269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165348:1
position: 165348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:166243-166365:1:exon

position:166243:1
position: 166243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166365:1
position: 166365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:167811-167897:1:exon

position:167811:1
position: 167811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167897:1
position: 167897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:169551-169799:1:exon

position:169551:1
position: 169551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169799:1
position: 169799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:172723-172861:1:exon

position:172723:1
position: 172723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172861:1
position: 172861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:172908-173242:1:exon

position:172908:1
position: 172908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

U2AF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: U2AF2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: splicing factor U2AF 65 kDa subunit
translation: MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRERRTRDQRSVSRDRRRRRSPLSLSGPLSRSPRHEKKKKIRKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRXGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLLNMVLPEELLDDDEYEEIVEDVRDECGKYGTVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKFCDPDSYHRRDFW
SIO_010081: U2AF2
subclass of: SO_0000673
so part of: U2AF2
location: join(154333..154381,156545..156680,159262..159291,160080..160184,160916..161067,162729..162844,164102..164240,165269..165348,166243..166365,167811..167897,169551..169799,172723..172857)
location: region:154333-172857:1
so has part: feature:154333-154381:1:exon
so has part: feature:156545-156680:1:exon
so has part: feature:159262-159291:1:exon
so has part: feature:160080-160184:1:exon
so has part: feature:160916-161067:1:exon
so has part: feature:162729-162844:1:exon
so has part: feature:164102-164240:1:exon
so has part: feature:165269-165348:1:exon
so has part: feature:166243-166365:1:exon
so has part: feature:167811-167897:1:exon
so has part: feature:169551-169799:1:exon
so has part: feature:172723-172857:1:exon

XP_041568944.1
type: Protein
SIO_000068: ncbiprotein

position:154333:1
position: 154333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172857:1
position: 172857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:154333-154381:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:156545-156680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:159262-159291:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160080-160184:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160916-161067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162729-162844:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:164102-164240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165269-165348:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:166243-166365:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:167811-167897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:169551-169799:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:172723-172857:1:exon

LENG8
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LENG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 175255..205097
location: region:175255-205097:1
so has part: feature:175255-205097:1:exon
subclass of: SO_0000010

121468813
type: Gene
SIO_000068: ncbigene

position:175255:1
position: 175255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205097:1
position: 205097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175255-205097:1:exon

LENG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LENG8
product: leukocyte receptor cluster member 8
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712958.1
SIO_010081: LENG8
subclass of: SO_0000673
so part of: LENG8
location: join(175255..175286,175369..175444,175546..175557,176459..176569,178477..178607,178693..178895,180487..180601,184737..184937,186872..187178,189294..189392,191629..191757,193316..193640,194615..194716,198290..198358,198474..198603,201558..201765,203127..205097)
location: region:175255-205097:1
so has part: feature:175255-175286:1:exon
so has part: feature:175369-175444:1:exon
so has part: feature:175546-175557:1:exon
so has part: feature:176459-176569:1:exon
so has part: feature:178477-178607:1:exon
so has part: feature:178693-178895:1:exon
so has part: feature:180487-180601:1:exon
so has part: feature:184737-184937:1:exon
so has part: feature:186872-187178:1:exon
so has part: feature:189294-189392:1:exon
so has part: feature:191629-191757:1:exon
so has part: feature:193316-193640:1:exon
so has part: feature:194615-194716:1:exon
so has part: feature:198290-198358:1:exon
so has part: feature:198474-198603:1:exon
so has part: feature:201558-201765:1:exon
so has part: feature:203127-205097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175255-175286:1:exon

position:175286:1
position: 175286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:175369-175444:1:exon

position:175369:1
position: 175369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175444:1
position: 175444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175546-175557:1:exon

position:175546:1
position: 175546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175557:1
position: 175557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176459-176569:1:exon

position:176459:1
position: 176459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176569:1
position: 176569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:178477-178607:1:exon

position:178477:1
position: 178477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178607:1
position: 178607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:178693-178895:1:exon

position:178693:1
position: 178693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178895:1
position: 178895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:180487-180601:1:exon

position:180487:1
position: 180487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180601:1
position: 180601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:184737-184937:1:exon

position:184737:1
position: 184737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184937:1
position: 184937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:186872-187178:1:exon

position:186872:1
position: 186872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187178:1
position: 187178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:189294-189392:1:exon

position:189294:1
position: 189294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189392:1
position: 189392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:191629-191757:1:exon

position:191629:1
position: 191629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191757:1
position: 191757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:193316-193640:1:exon

position:193316:1
position: 193316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193640:1
position: 193640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:194615-194716:1:exon

position:194615:1
position: 194615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194716:1
position: 194716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:198290-198358:1:exon

position:198290:1
position: 198290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198358:1
position: 198358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:198474-198603:1:exon

position:198474:1
position: 198474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198603:1
position: 198603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:201558-201765:1:exon

position:201558:1
position: 201558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201765:1
position: 201765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:203127-205097:1:exon

position:203127:1
position: 203127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LENG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LENG8
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leukocyte receptor cluster member 8
translation: MAANLGEQREWAAPFGAAAAAREEAAAPAENPEWEKGGAQYAPPGQGDPSVAQPPQYYPWYQPYGGGYYPYGYYYPMQGVYPGYGAPPAPYPTGGGGSYAPPQQPQPPPPPPPSRRVGWPSSRPCPAWRSRRPSGPPSPPPPPPSPLPTRGGEGRPPRGARPPTPPPTTGRGPPEGQKGGGQLWSRMKQAPGSGGLKFQLPKRAPFALPPPGFGGPSGPEKLHGGHGESRGSVGRGRPEDWPPEMKAYVQRCFTACESEEDKDRTEKLLKELLQARLQDGSAFTIDWSREPLPGLGREGTTSPKKKRWELPPSRAGPAGPGPPQNPQNAQNSPQNASGRPPQNPPRGGGAAPGGPRGVPGGKFGNRNVFVPEHSSSSSGSRSRSSSRSPGRPCRRRPKITQNNPKYPQITHPKPSRSSSRSPGRPCRRSDSDSDSGSGPELRPGGRRAGPQKPRGRGGPLERGRARGQRGKRPEPCPPRRGRRRPPPEPEDGDRDRDRDVRRQRRAQRFQGGLGGSGGAGTPKKPRPNPPPAPPPPPPGPSPAGDTDWEQLKVSGTCQEVTKRYLRLTCAPDPSTVRPVPVLRQALALVRSHWAEHRDYAWACEQLKSIRQDLTVQGVRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKALYGESLAGCEGEFTAYRILYCLFTNSSGELTTELALLPPNLRSDPAVTHALAVRAAWALGLYSRFFRLQRSAPAMGPRLIDLFAERERRRALRAFLKAFRPALPTAQLGPLVGLEPPERRRFLGGLPLTYTGPDRGAIDCRQSLPALPHI
SIO_010081: LENG8
subclass of: SO_0000673
so part of: LENG8
location: join(175255..175286,175369..175444,175546..175557,176459..176569,178477..178607,178693..178895,180487..180601,184737..184937,186872..187178,189294..189392,191629..191757,193316..193640,194615..194716,198290..198358,198474..198603,201558..201765,203127..203286)
location: region:175255-203286:1
so has part: feature:175255-175286:1:exon
so has part: feature:175369-175444:1:exon
so has part: feature:175546-175557:1:exon
so has part: feature:176459-176569:1:exon
so has part: feature:178477-178607:1:exon
so has part: feature:178693-178895:1:exon
so has part: feature:180487-180601:1:exon
so has part: feature:184737-184937:1:exon
so has part: feature:186872-187178:1:exon
so has part: feature:189294-189392:1:exon
so has part: feature:191629-191757:1:exon
so has part: feature:193316-193640:1:exon
so has part: feature:194615-194716:1:exon
so has part: feature:198290-198358:1:exon
so has part: feature:198474-198603:1:exon
so has part: feature:201558-201765:1:exon
so has part: feature:203127-203286:1:exon

XP_041568892.1
type: Protein
SIO_000068: ncbiprotein

position:203286:1
position: 203286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175255-175286:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:175369-175444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175546-175557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176459-176569:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:178477-178607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:178693-178895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:180487-180601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:184737-184937:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186872-187178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:189294-189392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:191629-191757:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:193316-193640:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:194615-194716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:198290-198358:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:198474-198603:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:201558-201765:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:203127-203286:1:exon

PPP1R12C
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PPP1R12C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(205272..230153)
location: region:205272-230153:-1
so has part: feature:205272-230153:-1:exon
subclass of: SO_0000010

121468814
type: Gene
SIO_000068: ncbigene

position:205272:-1
position: 205272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230153:-1
position: 230153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205272-230153:-1:exon

PPP1R12C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PPP1R12C
product: protein phosphatase 1 regulatory subunit 12C
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712959.1
SIO_010081: PPP1R12C
subclass of: SO_0000673
so part of: PPP1R12C
location: complement(join(205272..205639,206279..206329,208530..208580,210129..210233,210668..210701,211477..211550,212354..212461,213726..213816,214751..214800,214883..215047,216562..216781,220131..220228,221109..221183,223054..223198,223925..224084,226471..226589,228315..228445,229864..230153))
location: region:205272-230153:-1
so has part: feature:229864-230153:-1:exon
so has part: feature:228315-228445:-1:exon
so has part: feature:226471-226589:-1:exon
so has part: feature:223925-224084:-1:exon
so has part: feature:223054-223198:-1:exon
so has part: feature:221109-221183:-1:exon
so has part: feature:220131-220228:-1:exon
so has part: feature:216562-216781:-1:exon
so has part: feature:214883-215047:-1:exon
so has part: feature:214751-214800:-1:exon
so has part: feature:213726-213816:-1:exon
so has part: feature:212354-212461:-1:exon
so has part: feature:211477-211550:-1:exon
so has part: feature:210668-210701:-1:exon
so has part: feature:210129-210233:-1:exon
so has part: feature:208530-208580:-1:exon
so has part: feature:206279-206329:-1:exon
so has part: feature:205272-205639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229864-230153:-1:exon

position:229864:-1
position: 229864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:228315-228445:-1:exon

position:228315:-1
position: 228315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228445:-1
position: 228445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:226471-226589:-1:exon

position:226471:-1
position: 226471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226589:-1
position: 226589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:223925-224084:-1:exon

position:223925:-1
position: 223925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224084:-1
position: 224084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:223054-223198:-1:exon

position:223054:-1
position: 223054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223198:-1
position: 223198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:221109-221183:-1:exon

position:221109:-1
position: 221109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221183:-1
position: 221183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:220131-220228:-1:exon

position:220131:-1
position: 220131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:220228:-1
position: 220228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:216562-216781:-1:exon

position:216562:-1
position: 216562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216781:-1
position: 216781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:214883-215047:-1:exon

position:214883:-1
position: 214883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215047:-1
position: 215047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:214751-214800:-1:exon

position:214751:-1
position: 214751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214800:-1
position: 214800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:213726-213816:-1:exon

position:213726:-1
position: 213726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213816:-1
position: 213816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:212354-212461:-1:exon

position:212354:-1
position: 212354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212461:-1
position: 212461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:211477-211550:-1:exon

position:211477:-1
position: 211477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211550:-1
position: 211550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:210668-210701:-1:exon

position:210668:-1
position: 210668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210701:-1
position: 210701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:210129-210233:-1:exon

position:210129:-1
position: 210129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210233:-1
position: 210233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:208530-208580:-1:exon

position:208530:-1
position: 208530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208580:-1
position: 208580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:206279-206329:-1:exon

position:206279:-1
position: 206279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206329:-1
position: 206329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:205272-205639:-1:exon

position:205639:-1
position: 205639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R12C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PPP1R12C
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein phosphatase 1 regulatory subunit 12C
translation: MAAAAAAAAAAAAERRREQLRRWEEAAAAAPGPGEARPGPPRVRFERQAEFRAACAGAELAEARAMVMAPEGGGRALLGGANADGISALHQACIDENMEVVQFLVESGADVNQADNEGWTPLHVAAACGCHHIAQYLLSHGADVTALTCDLELPLEVAEDEALEELLRAELNSRGVTVADAKRAEERRMLRDTRLWLDSGQLRDCPHPATGASALHVAAAKGYIEVMRLLLAAGYDPDVRDKDGWTPLHAAAHWGVEEACRVLCEHLCDMSPQNNVGQRPCDLADEETLPLLEELQRRQLHLRRLKDPAGAPPPPPAPDPEGAPPPTGGAKHRRSSVCRRSSRERLWLQARARVGEGPLPPPLRPPGGGGAPDSDEGGRVRGRGRPPRGVRALWGEKRGFWEKWGFWGRVPGPAPPPPPPQPPPGALLRSGSLGAWPGPARDTPPAQAPPPVRRSASSPRLQVSETPQGRPSPTPRAPRPFQPPARDEESESQRKARSRLMRQARRATQGVTLPELRAAEHGIGRGAEGRGQQQPIRDEGGREPTDPPRLPSPTRGPESDGPEDAPPPPSPTPAPPFDYQQLFQELWGENERIREQLQEAELALTQSRLELERVTQRQERSAERPARLELERFERRALELKAAELEEELKALSDLRADNQRLKDENAALIRVISKLSK
SIO_010081: PPP1R12C
subclass of: SO_0000673
so part of: PPP1R12C
location: complement(join(205553..205639,206279..206329,208530..208580,210129..210233,210668..210701,211477..211550,212354..212461,213726..213816,214751..214800,214883..215047,216562..216781,220131..220228,221109..221183,223054..223198,223925..224084,226471..226589,228315..228445,229864..230138))
location: region:205553-230138:-1
so has part: feature:229864-230138:-1:exon
so has part: feature:228315-228445:-1:exon
so has part: feature:226471-226589:-1:exon
so has part: feature:223925-224084:-1:exon
so has part: feature:223054-223198:-1:exon
so has part: feature:221109-221183:-1:exon
so has part: feature:220131-220228:-1:exon
so has part: feature:216562-216781:-1:exon
so has part: feature:214883-215047:-1:exon
so has part: feature:214751-214800:-1:exon
so has part: feature:213726-213816:-1:exon
so has part: feature:212354-212461:-1:exon
so has part: feature:211477-211550:-1:exon
so has part: feature:210668-210701:-1:exon
so has part: feature:210129-210233:-1:exon
so has part: feature:208530-208580:-1:exon
so has part: feature:206279-206329:-1:exon
so has part: feature:205553-205639:-1:exon

XP_041568893.1
type: Protein
SIO_000068: ncbiprotein

position:205553:-1
position: 205553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230138:-1
position: 230138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229864-230138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:228315-228445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226471-226589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223925-224084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223054-223198:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:221109-221183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:220131-220228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216562-216781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:214883-215047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:214751-214800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:213726-213816:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:212354-212461:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:211477-211550:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:210668-210701:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:210129-210233:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:208530-208580:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:206279-206329:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:205553-205639:-1:exon

TNNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TNNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(230373..242551)
location: region:230373-242551:-1
so has part: feature:230373-242551:-1:exon
subclass of: SO_0000010

121468815
type: Gene
SIO_000068: ncbigene

position:230373:-1
position: 230373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242551:-1
position: 242551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230373-242551:-1:exon

TNNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNNT1
product: troponin T1, slow skeletal type
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712960.1
SIO_010081: TNNT1
subclass of: SO_0000673
so part of: TNNT1
location: complement(join(230373..230415,231021..231061,233584..233769,237241..237301,237385..237406,238739..238771,239540..239569,241194..241238,242402..242551))
location: region:230373-242551:-1
so has part: feature:242402-242551:-1:exon
so has part: feature:241194-241238:-1:exon
so has part: feature:239540-239569:-1:exon
so has part: feature:238739-238771:-1:exon
so has part: feature:237385-237406:-1:exon
so has part: feature:237241-237301:-1:exon
so has part: feature:233584-233769:-1:exon
so has part: feature:231021-231061:-1:exon
so has part: feature:230373-230415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242402-242551:-1:exon

position:242402:-1
position: 242402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:241194-241238:-1:exon

position:241194:-1
position: 241194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241238:-1
position: 241238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239540-239569:-1:exon

position:239540:-1
position: 239540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239569:-1
position: 239569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:238739-238771:-1:exon

position:238739:-1
position: 238739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238771:-1
position: 238771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:237385-237406:-1:exon

position:237385:-1
position: 237385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237406:-1
position: 237406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:237241-237301:-1:exon

position:237241:-1
position: 237241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237301:-1
position: 237301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:233584-233769:-1:exon

position:233584:-1
position: 233584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233769:-1
position: 233769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:231021-231061:-1:exon

position:231021:-1
position: 231021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231061:-1
position: 231061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:230373-230415:-1:exon

position:230415:-1
position: 230415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin T, slow skeletal muscle
translation: MAVTSSRGGRGGTPIKGPPKRGGGARVGPPGRERGPPKSAPCRSPRRSSKAAEEEEEEEASEPPKPPEEPEEERPRPRPPLTPLAPPKIPEGERVDFDDIHRKRMEKDLLELQTLIDAHFEQRRREEEELKGLMERIVSSAFLGDFWDFWVFLGFFVSGDINVLYNRISHAQKFKKVAKGRVGGRWK
SIO_010081: TNNT1
subclass of: SO_0000673
so part of: TNNT1
location: complement(join(230373..230415,231021..231061,233584..233769,237241..237301,237385..237406,238739..238771,239540..239569,241194..241238,242402..242504))
location: region:230373-242504:-1
so has part: feature:242402-242504:-1:exon
so has part: feature:241194-241238:-1:exon
so has part: feature:239540-239569:-1:exon
so has part: feature:238739-238771:-1:exon
so has part: feature:237385-237406:-1:exon
so has part: feature:237241-237301:-1:exon
so has part: feature:233584-233769:-1:exon
so has part: feature:231021-231061:-1:exon
so has part: feature:230373-230415:-1:exon

XP_041568894.1
type: Protein
SIO_000068: ncbiprotein

position:242504:-1
position: 242504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242402-242504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:241194-241238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239540-239569:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238739-238771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237385-237406:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:237241-237301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:233584-233769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:231021-231061:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:230373-230415:-1:exon

LOC121468816
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468816
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(247621..>258263)
location: region:247621-258263:-1
so has part: feature:247621-258263:-1:exon
subclass of: SO_0000010

121468816
type: Gene
SIO_000068: ncbigene

position:247621:-1
position: 247621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258263:-1
position: 258263
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247621-258263:-1:exon

LOC121468816
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468816
product: histone-lysine N-methyltransferase KMT5C-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_041712961.1
SIO_010081: LOC121468816
subclass of: SO_0000673
so part of: LOC121468816
location: complement(join(247621..248197,250027..250160,254138..254157,254313..254476,254683..254792,256836..256998,258001..>258263))
location: region:247621-258263:-1
so has part: feature:258001-258263:-1:exon
so has part: feature:256836-256998:-1:exon
so has part: feature:254683-254792:-1:exon
so has part: feature:254313-254476:-1:exon
so has part: feature:254138-254157:-1:exon
so has part: feature:250027-250160:-1:exon
so has part: feature:247621-248197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258001-258263:-1:exon

position:258001:-1
position: 258001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:256836-256998:-1:exon

position:256836:-1
position: 256836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:256998:-1
position: 256998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:254683-254792:-1:exon

position:254683:-1
position: 254683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254792:-1
position: 254792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:254313-254476:-1:exon

position:254313:-1
position: 254313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254476:-1
position: 254476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:254138-254157:-1:exon

position:254138:-1
position: 254138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254157:-1
position: 254157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:250027-250160:-1:exon

position:250027:-1
position: 250027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:250160:-1
position: 250160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:247621-248197:-1:exon

position:248197:-1
position: 248197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468816
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468816
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase KMT5C-like
translation: PRRDSPRARVTPTALPVVPLTVTPLTVLQERRRRRRRRERSVAAAAAGPVRAAGTAVTARELCENDDLATSLVLDSVLGFRTHKMGVSPLPALRRRARLRAALEAFRRRRDLEAAWRTLSGAWAPAFFRRRRPQQRAELKQHVFRYLRTLLPESGFTIQPCTRYSRDVNGARVVSTRTWRKHETLELLGGCGVELRGSDRALLRAGDNDFSLMYSTRRRRTQLWLGPAAFINHDCRPNCRLVSAPGGARVQALQDIPPRAEITCFYGDGFFGEGNRGCECRTCERLGEGAFRRRGGRGRTTPPPPPPLPPRDPPPKYELRDTDVRLRRRRGGQGGDPSPKKRPRQRRQRRRPLPTGATPAQPRVALHDCVSCGGRCALRGRVPAVLLGTPKNAPRPKSDPKLSLYAHVRLGGCTPKSGFGGEGRAGSPPRLRLVVSEGELALALTPARV
SIO_010081: LOC121468816
subclass of: SO_0000673
so part of: LOC121468816
location: complement(join(247700..248197,250027..250160,254138..254157,254313..254476,254683..254792,256836..256998,258001..>258263))
location: region:247700-258263:-1
so has part: feature:258001-258263:-1:exon
so has part: feature:256836-256998:-1:exon
so has part: feature:254683-254792:-1:exon
so has part: feature:254313-254476:-1:exon
so has part: feature:254138-254157:-1:exon
so has part: feature:250027-250160:-1:exon
so has part: feature:247700-248197:-1:exon

XP_041568895.1
type: Protein
SIO_000068: ncbiprotein

position:247700:-1
position: 247700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258001-258263:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256836-256998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:254683-254792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254313-254476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:254138-254157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:250027-250160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:247700-248197:-1:exon

HSPBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: HSPBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 258320..277766
location: region:258320-277766:1
so has part: feature:258320-277766:1:exon
subclass of: SO_0000010

115491782
type: Gene
SIO_000068: ncbigene

position:258320:1
position: 258320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277766:1
position: 277766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258320-277766:1:exon

HSPBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: HSPBP1
product: HSPA (Hsp70) binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_041713018.1
SIO_010081: HSPBP1
subclass of: SO_0000673
so part of: HSPBP1
location: join(258320..258995,264352..264556,268249..268470,270014..270169,273359..273455,275664..275775,277371..277766)
location: region:258320-277766:1
so has part: feature:258320-258995:1:exon
so has part: feature:264352-264556:1:exon
so has part: feature:268249-268470:1:exon
so has part: feature:270014-270169:1:exon
so has part: feature:273359-273455:1:exon
so has part: feature:275664-275775:1:exon
so has part: feature:277371-277766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258320-258995:1:exon

position:258995:1
position: 258995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:264352-264556:1:exon

position:264352:1
position: 264352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264556:1
position: 264556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:268249-268470:1:exon

position:268249:1
position: 268249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268470:1
position: 268470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:270014-270169:1:exon

position:270014:1
position: 270014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270169:1
position: 270169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273359-273455:1:exon

position:273359:1
position: 273359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273455:1
position: 273455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:275664-275775:1:exon

position:275664:1
position: 275664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275775:1
position: 275775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277371-277766:1:exon

position:277371:1
position: 277371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSPBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: HSPBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hsp70-binding protein 1
translation: MAAAEGDGAGGGRREPPRTLQGLLEMALTAGEARPEPREPLAEERQQWLREAVSEALSGPAAVRARLQRCLRLLARPCPGEAAAERGLGDTAGHEAALAELAELCESLDNATDFCSLGGLEALLPLLGHPWAPLRAGAARVLGCCAQNLPGAQVRALGLGALPALLGGLRGDPDPSVPPAALFAISCLVRAQPEGLQQLQDLGGLEALGGALQSPHPPLRARAAFLLHCLLREHPRLTGPLLQQGLVPRAAALLRSEHDGAHEHGLGVLCSLAAGSPEGLRECRDPALGLEQLLRQRREQLKGHDQFQEELEFCERLLQLCFETPPEESTMDR
SIO_010081: HSPBP1
subclass of: SO_0000673
so part of: HSPBP1
location: join(258864..258995,264352..264556,268249..268470,270014..270169,273359..273455,275664..275775,277371..277448)
location: region:258864-277448:1
so has part: feature:258864-258995:1:exon
so has part: feature:264352-264556:1:exon
so has part: feature:268249-268470:1:exon
so has part: feature:270014-270169:1:exon
so has part: feature:273359-273455:1:exon
so has part: feature:275664-275775:1:exon
so has part: feature:277371-277448:1:exon

XP_041568952.1
type: Protein
SIO_000068: ncbiprotein

position:258864:1
position: 258864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277448:1
position: 277448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258864-258995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:264352-264556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:268249-268470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270014-270169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273359-273455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275664-275775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277371-277448:1:exon

LOC121468848
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 285857..290985
location: region:285857-290985:1
so has part: feature:285857-290985:1:exon
subclass of: SO_0000010

121468848
type: Gene
SIO_000068: ncbigene

position:285857:1
position: 285857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290985:1
position: 290985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285857-290985:1:exon

LOC121468848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468848
product: protein FAM246C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041713019.1
SIO_010081: LOC121468848
subclass of: SO_0000673
so part of: LOC121468848
location: join(285857..285953,286294..286402,288737..288811,290668..290985)
location: region:285857-290985:1
so has part: feature:285857-285953:1:exon
so has part: feature:286294-286402:1:exon
so has part: feature:288737-288811:1:exon
so has part: feature:290668-290985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285857-285953:1:exon

position:285953:1
position: 285953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286294-286402:1:exon

position:286294:1
position: 286294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286402:1
position: 286402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:288737-288811:1:exon

position:288737:1
position: 288737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288811:1
position: 288811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:290668-290985:1:exon

position:290668:1
position: 290668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM246C-like
translation: MGTPKMGTGTPKMGSGTPPVRIPTRWGRWLRCRSGSVFCPSGTPPRPPPASGGAANCWCWAGGPSPLSLPRSRLWRLRGRRCWWSCRRWFPPSAPPSWGRCGRARRLWRGRGASSPGGGPGSPRPTCASARGRARRPQTQITPKGPETPPRIILNSPETPDPN
SIO_010081: LOC121468848
subclass of: SO_0000673
so part of: LOC121468848
location: join(285876..285953,286294..286402,288737..288811,290668..290897)
location: region:285876-290897:1
so has part: feature:285876-285953:1:exon
so has part: feature:286294-286402:1:exon
so has part: feature:288737-288811:1:exon
so has part: feature:290668-290897:1:exon

XP_041568953.1
type: Protein
SIO_000068: ncbiprotein

position:285876:1
position: 285876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290897:1
position: 290897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285876-285953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286294-286402:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288737-288811:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290668-290897:1:exon

TNNI3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TNNI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 291466..303719
location: region:291466-303719:1
so has part: feature:291466-303719:1:exon
subclass of: SO_0000010

121468870
type: Gene
SIO_000068: ncbigene

position:291466:1
position: 291466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303719:1
position: 303719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291466-303719:1:exon

TNNI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNNI3
product: troponin I3, cardiac type, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041713061.1
SIO_010081: TNNI3
subclass of: SO_0000673
so part of: TNNI3
location: join(291466..291540,293309..293329,293919..293931,295500..295637,296815..296856,297991..298125,299541..299630,301299..301469,302282..302376,303539..303719)
location: region:291466-303719:1
so has part: feature:291466-291540:1:exon
so has part: feature:293309-293329:1:exon
so has part: feature:293919-293931:1:exon
so has part: feature:295500-295637:1:exon
so has part: feature:296815-296856:1:exon
so has part: feature:297991-298125:1:exon
so has part: feature:299541-299630:1:exon
so has part: feature:301299-301469:1:exon
so has part: feature:302282-302376:1:exon
so has part: feature:303539-303719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291466-291540:1:exon

position:291540:1
position: 291540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:293309-293329:1:exon

position:293309:1
position: 293309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293329:1
position: 293329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293919-293931:1:exon

position:293919:1
position: 293919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293931:1
position: 293931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:295500-295637:1:exon

position:295500:1
position: 295500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295637:1
position: 295637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296815-296856:1:exon

position:296815:1
position: 296815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296856:1
position: 296856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297991-298125:1:exon

position:297991:1
position: 297991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298125:1
position: 298125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:299541-299630:1:exon

position:299541:1
position: 299541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299630:1
position: 299630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:301299-301469:1:exon

position:301299:1
position: 301299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301469:1
position: 301469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:302282-302376:1:exon

position:302282:1
position: 302282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302376:1
position: 302376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:303539-303719:1:exon

position:303539:1
position: 303539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNNI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNNI3
product: troponin I3, cardiac type, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041713062.1
SIO_010081: TNNI3
subclass of: SO_0000673
so part of: TNNI3
location: join(291466..291540,293309..293329,293919..293931,295500..295637,296815..296856,297991..298125,299541..299630,301299..301469,302282..302376,303542..303719)
location: region:291466-303719:1
so has part: feature:291466-291540:1:exon
so has part: feature:293309-293329:1:exon
so has part: feature:293919-293931:1:exon
so has part: feature:295500-295637:1:exon
so has part: feature:296815-296856:1:exon
so has part: feature:297991-298125:1:exon
so has part: feature:299541-299630:1:exon
so has part: feature:301299-301469:1:exon
so has part: feature:302282-302376:1:exon
so has part: feature:303542-303719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291466-291540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293309-293329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293919-293931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:295500-295637:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296815-296856:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297991-298125:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299541-299630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301299-301469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302282-302376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:303542-303719:1:exon

position:303542:1
position: 303542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNNI3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TNNI3
product: troponin I3, cardiac type, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041713063.1
SIO_010081: TNNI3
subclass of: SO_0000673
so part of: TNNI3
location: join(291471..291540,293309..293329,295227..295239,295500..295637,296815..296856,297991..298125,299541..299630,301299..301469,302282..302376,303539..303719)
location: region:291471-303719:1
so has part: feature:291471-291540:1:exon
so has part: feature:293309-293329:1:exon
so has part: feature:295227-295239:1:exon
so has part: feature:295500-295637:1:exon
so has part: feature:296815-296856:1:exon
so has part: feature:297991-298125:1:exon
so has part: feature:299541-299630:1:exon
so has part: feature:301299-301469:1:exon
so has part: feature:302282-302376:1:exon
so has part: feature:303539-303719:1:exon

position:291471:1
position: 291471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291471-291540:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293309-293329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295227-295239:1:exon

position:295227:1
position: 295227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295239:1
position: 295239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:295500-295637:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296815-296856:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297991-298125:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299541-299630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:301299-301469:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302282-302376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:303539-303719:1:exon

TNNI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNNI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, cardiac muscle isoform X1
translation: MAEMEDPTRAPEEEGGGEGGEGSEPPRDPPPQPPPLRRKSSANYRGYAVEPHAKRKSKISASRKLQLKTLLLQRAKRDLEKEEQERAAEKIRVLGELCPPLAALEGMGAAELQELCRELHACVARVDEERYDMGTRVSKNVTELEELRRRVAAGRFVRPNLRRVRLSADAMMAALLGTKPRVGTDLRAGLRQVRKDDAEKESYEVGDWRKNVDAMSGMEGRKKKFEGAAA
SIO_010081: TNNI3
subclass of: SO_0000673
so part of: TNNI3
location: join(293319..293329,293919..293931,295500..295637,296815..296856,297991..298125,299541..299630,301299..301469,302282..302374)
location: region:293319-302374:1
so has part: feature:293319-293329:1:exon
so has part: feature:293919-293931:1:exon
so has part: feature:295500-295637:1:exon
so has part: feature:296815-296856:1:exon
so has part: feature:297991-298125:1:exon
so has part: feature:299541-299630:1:exon
so has part: feature:301299-301469:1:exon
so has part: feature:302282-302374:1:exon

XP_041568995.1
type: Protein
SIO_000068: ncbiprotein

position:293319:1
position: 293319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302374:1
position: 302374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293319-293329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293919-293931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295500-295637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296815-296856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297991-298125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299541-299630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:301299-301469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302282-302374:1:exon

TNNI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNNI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, cardiac muscle isoform X1
translation: MAEMEDPTRAPEEEGGGEGGEGSEPPRDPPPQPPPLRRKSSANYRGYAVEPHAKRKSKISASRKLQLKTLLLQRAKRDLEKEEQERAAEKIRVLGELCPPLAALEGMGAAELQELCRELHACVARVDEERYDMGTRVSKNVTELEELRRRVAAGRFVRPNLRRVRLSADAMMAALLGTKPRVGTDLRAGLRQVRKDDAEKESYEVGDWRKNVDAMSGMEGRKKKFEGAAA
SIO_010081: TNNI3
subclass of: SO_0000673
so part of: TNNI3
location: join(293319..293329,293919..293931,295500..295637,296815..296856,297991..298125,299541..299630,301299..301469,302282..302374)
location: region:293319-302374:1
so has part: feature:293319-293329:1:exon
so has part: feature:293919-293931:1:exon
so has part: feature:295500-295637:1:exon
so has part: feature:296815-296856:1:exon
so has part: feature:297991-298125:1:exon
so has part: feature:299541-299630:1:exon
so has part: feature:301299-301469:1:exon
so has part: feature:302282-302374:1:exon

XP_041568996.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293319-293329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293919-293931:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295500-295637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296815-296856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297991-298125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299541-299630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:301299-301469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302282-302374:1:exon

TNNI3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TNNI3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin I, cardiac muscle isoform X2
translation: MAEMEEPTRAPEEEGGGEGGEGSEPPRDPPPQPPPLRRKSSANYRGYAVEPHAKRKSKISASRKLQLKTLLLQRAKRDLEKEEQERAAEKIRVLGELCPPLAALEGMGAAELQELCRELHACVARVDEERYDMGTRVSKNVTELEELRRRVAAGRFVRPNLRRVRLSADAMMAALLGTKPRVGTDLRAGLRQVRKDDAEKESYEVGDWRKNVDAMSGMEGRKKKFEGAAA
SIO_010081: TNNI3
subclass of: SO_0000673
so part of: TNNI3
location: join(293319..293329,295227..295239,295500..295637,296815..296856,297991..298125,299541..299630,301299..301469,302282..302374)
location: region:293319-302374:1
so has part: feature:293319-293329:1:exon
so has part: feature:295227-295239:1:exon
so has part: feature:295500-295637:1:exon
so has part: feature:296815-296856:1:exon
so has part: feature:297991-298125:1:exon
so has part: feature:299541-299630:1:exon
so has part: feature:301299-301469:1:exon
so has part: feature:302282-302374:1:exon

XP_041568997.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:293319-293329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295227-295239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:295500-295637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296815-296856:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297991-298125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299541-299630:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:301299-301469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:302282-302374:1:exon

LOC121468874
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(306787..320251)
location: region:306787-320251:-1
so has part: feature:306787-320251:-1:exon
subclass of: SO_0000010

121468874
type: Gene
SIO_000068: ncbigene

position:306787:-1
position: 306787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320251:-1
position: 320251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:306787-320251:-1:exon

LOC121468874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468874
product: sulfotransferase 2B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041713066.1
SIO_010081: LOC121468874
subclass of: SO_0000673
so part of: LOC121468874
location: complement(join(306787..306935,308075..308255,310017..310111,311007..311133,314609..314817,316738..316871,320225..320251))
location: region:306787-320251:-1
so has part: feature:320225-320251:-1:exon
so has part: feature:316738-316871:-1:exon
so has part: feature:314609-314817:-1:exon
so has part: feature:311007-311133:-1:exon
so has part: feature:310017-310111:-1:exon
so has part: feature:308075-308255:-1:exon
so has part: feature:306787-306935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320225-320251:-1:exon

position:320225:-1
position: 320225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316738-316871:-1:exon

position:316738:-1
position: 316738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316871:-1
position: 316871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314609-314817:-1:exon

position:314609:-1
position: 314609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314817:-1
position: 314817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:311007-311133:-1:exon

position:311007:-1
position: 311007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311133:-1
position: 311133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:310017-310111:-1:exon

position:310017:-1
position: 310017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310111:-1
position: 310111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:308075-308255:-1:exon

position:308075:-1
position: 308075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308255:-1
position: 308255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:306787-306935:-1:exon

position:306935:-1
position: 306935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 2B1-like
translation: MSCGYFQHRGVTFPGLLYSPRGLEAAREFPVEDDDVFNVTYQKSGTVWMLEILSLILRGGDPSWCRSVPSWERGPWLETLPGLRRARINARPRILSSHLPAPLFPRAFFNSKAKVIYTVRDPKDVLVSLFHFSRIFRPYKDPGSLPEFMEKFLRGDVPFGSWFQHVRGWLQLRGRDNFFWISYEELQQDLRGSVERLCSFLGRPLSPAALDAVVANASFVTMSHNPMSNFSLSPTFILDRRRGPFLRKGISGDWRNHLSPEQSRRFDRVLPEQMRGWGSPSPGTPK
SIO_010081: LOC121468874
subclass of: SO_0000673
so part of: LOC121468874
location: complement(join(306820..306935,308075..308255,310017..310111,311007..311133,314609..314817,316738..316870))
location: region:306820-316870:-1
so has part: feature:316738-316870:-1:exon
so has part: feature:314609-314817:-1:exon
so has part: feature:311007-311133:-1:exon
so has part: feature:310017-310111:-1:exon
so has part: feature:308075-308255:-1:exon
so has part: feature:306820-306935:-1:exon

XP_041569000.1
type: Protein
SIO_000068: ncbiprotein

position:306820:-1
position: 306820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316870:-1
position: 316870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316738-316870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314609-314817:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:311007-311133:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:310017-310111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308075-308255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306820-306935:-1:exon

PRMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(322472..357604)
location: region:322472-357604:-1
so has part: feature:322472-357604:-1:exon
subclass of: SO_0000010

121468847
type: Gene
SIO_000068: ncbigene

position:322472:-1
position: 322472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357604:-1
position: 357604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322472-357604:-1:exon

PRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT1
product: protein arginine methyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_041713017.1
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322472..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,344346..344501,348939..349040,357511..357604))
location: region:322472-357604:-1
so has part: feature:357511-357604:-1:exon
so has part: feature:348939-349040:-1:exon
so has part: feature:344346-344501:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322472-322740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357604:-1:exon

position:357511:-1
position: 357511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348939-349040:-1:exon

position:348939:-1
position: 348939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349040:-1
position: 349040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344346-344501:-1:exon

position:344346:-1
position: 344346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344501:-1
position: 344501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:340318-340381:-1:exon

position:340318:-1
position: 340318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340381:-1
position: 340381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:338309-338451:-1:exon

position:338309:-1
position: 338309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338451:-1
position: 338451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:333671-333758:-1:exon

position:333671:-1
position: 333671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333758:-1
position: 333758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:331671-331786:-1:exon

position:331671:-1
position: 331671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331786:-1
position: 331786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:328328-328478:-1:exon

position:328328:-1
position: 328328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328478:-1
position: 328478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:323891-324012:-1:exon

position:323891:-1
position: 323891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324012:-1
position: 324012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:322472-322740:-1:exon

position:322740:-1
position: 322740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT1
product: protein arginine methyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_041713016.1
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322472..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,344346..344501,348939..349058,357511..357588))
location: region:322472-357588:-1
so has part: feature:357511-357588:-1:exon
so has part: feature:348939-349058:-1:exon
so has part: feature:344346-344501:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322472-322740:-1:exon

position:357588:-1
position: 357588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357588:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348939-349058:-1:exon

position:349058:-1
position: 349058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:344346-344501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340318-340381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338309-338451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333671-333758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331671-331786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328328-328478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:323891-324012:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:322472-322740:-1:exon

PRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT1
product: protein arginine methyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_041713015.1
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322472..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,344346..344501,348939..349040,351718..351771,357511..357563))
location: region:322472-357563:-1
so has part: feature:357511-357563:-1:exon
so has part: feature:351718-351771:-1:exon
so has part: feature:348939-349040:-1:exon
so has part: feature:344346-344501:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322472-322740:-1:exon

position:357563:-1
position: 357563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357563:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351718-351771:-1:exon

position:351718:-1
position: 351718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351771:-1
position: 351771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348939-349040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344346-344501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340318-340381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338309-338451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333671-333758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331671-331786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328328-328478:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:323891-324012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322472-322740:-1:exon

PRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT1
product: protein arginine methyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041713014.1
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322472..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,343089..343125,344383..344501,348939..349058,351718..351771,357511..357555))
location: region:322472-357555:-1
so has part: feature:357511-357555:-1:exon
so has part: feature:351718-351771:-1:exon
so has part: feature:348939-349058:-1:exon
so has part: feature:344383-344501:-1:exon
so has part: feature:343089-343125:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322472-322740:-1:exon

position:357555:-1
position: 357555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351718-351771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348939-349058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344383-344501:-1:exon

position:344383:-1
position: 344383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:343089-343125:-1:exon

position:343089:-1
position: 343089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343125:-1
position: 343125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:340318-340381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338309-338451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333671-333758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:331671-331786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:328328-328478:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:323891-324012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322472-322740:-1:exon

PRMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRMT1
product: protein arginine methyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_041713013.1
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322472..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,344346..344501,348939..349058,351718..351771,357511..357555))
location: region:322472-357555:-1
so has part: feature:357511-357555:-1:exon
so has part: feature:351718-351771:-1:exon
so has part: feature:348939-349058:-1:exon
so has part: feature:344346-344501:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322472-322740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357555:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351718-351771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348939-349058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344346-344501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340318-340381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338309-338451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333671-333758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331671-331786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328328-328478:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:323891-324012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322472-322740:-1:exon

PRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 1 isoform X5
translation: MAEAANCTMEVSCPPPEGSAKPSAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARRVIGIECSSISDYAVKIVKANKLDHVVSIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIYARDKWLSPQGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEELTFTAPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEEYLTVKSGEEIFGTITMKPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322657..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,344346..344501,348939..349040,357511..357540))
location: region:322657-357540:-1
so has part: feature:357511-357540:-1:exon
so has part: feature:348939-349040:-1:exon
so has part: feature:344346-344501:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322657-322740:-1:exon

XP_041568951.1
type: Protein
SIO_000068: ncbiprotein

position:322657:-1
position: 322657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357540:-1
position: 357540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348939-349040:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344346-344501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340318-340381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338309-338451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333671-333758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331671-331786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328328-328478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:323891-324012:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:322657-322740:-1:exon

PRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 1 isoform X4
translation: MAEAANCTMEPLCAPQVSCPPPEGSAKPSAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARRVIGIECSSISDYAVKIVKANKLDHVVSIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIYARDKWLSPQGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEELTFTAPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEEYLTVKSGEEIFGTITMKPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322657..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,344346..344501,348939..349058,357511..357540))
location: region:322657-357540:-1
so has part: feature:357511-357540:-1:exon
so has part: feature:348939-349058:-1:exon
so has part: feature:344346-344501:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322657-322740:-1:exon

XP_041568950.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348939-349058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:344346-344501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340318-340381:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338309-338451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333671-333758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:331671-331786:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328328-328478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:323891-324012:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:322657-322740:-1:exon

PRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 1 isoform X3
translation: MAEAANCTMENFVATLANGMSLRPPREEVSCPPPEGSAKPSAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARRVIGIECSSISDYAVKIVKANKLDHVVSIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIYARDKWLSPQGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEELTFTAPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEEYLTVKSGEEIFGTITMKPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322657..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,344346..344501,348939..349040,351718..351771,357511..357540))
location: region:322657-357540:-1
so has part: feature:357511-357540:-1:exon
so has part: feature:351718-351771:-1:exon
so has part: feature:348939-349040:-1:exon
so has part: feature:344346-344501:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322657-322740:-1:exon

XP_041568949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351718-351771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348939-349040:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344346-344501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340318-340381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338309-338451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333671-333758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331671-331786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328328-328478:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:323891-324012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322657-322740:-1:exon

PRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 1 isoform X2
translation: MAEAANCTMENFVATLANGMSLRPPREEPLCAPQVSCPPPEGSAKPSAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARRVIGIECSSISDYAVKIVKANKLDHVVSIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIYARDKWLSPQGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEELTFTAPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEEYLTVKSGEEIFGTITMKPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322657..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,343089..343125,344383..344501,348939..349058,351718..351771,357511..357540))
location: region:322657-357540:-1
so has part: feature:357511-357540:-1:exon
so has part: feature:351718-351771:-1:exon
so has part: feature:348939-349058:-1:exon
so has part: feature:344383-344501:-1:exon
so has part: feature:343089-343125:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322657-322740:-1:exon

XP_041568948.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351718-351771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348939-349058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344383-344501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343089-343125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340318-340381:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:338309-338451:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:333671-333758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:331671-331786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:328328-328478:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:323891-324012:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:322657-322740:-1:exon

PRMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein arginine N-methyltransferase 1 isoform X1
translation: MAEAANCTMENFVATLANGMSLRPPREEPLCAPQVSCPPPEGSAKPSAEDMTSKDYYFDSYAHFGIHEEMLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARRVIGIECSSISDYAVKIVKANKLDHVVSIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVIYARDKWLSPQGLIFPDRATLYVTAIEDRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEELTFTAPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEEYLTVKSGEEIFGTITMKPNAKNNRDLDFTIDLDFKGQLCELSCSTDYRMR
SIO_010081: PRMT1
subclass of: SO_0000673
so part of: PRMT1
location: complement(join(322657..322740,323891..324012,328328..328478,331671..331786,333671..333758,338309..338451,340318..340381,344346..344501,348939..349058,351718..351771,357511..357540))
location: region:322657-357540:-1
so has part: feature:357511-357540:-1:exon
so has part: feature:351718-351771:-1:exon
so has part: feature:348939-349058:-1:exon
so has part: feature:344346-344501:-1:exon
so has part: feature:340318-340381:-1:exon
so has part: feature:338309-338451:-1:exon
so has part: feature:333671-333758:-1:exon
so has part: feature:331671-331786:-1:exon
so has part: feature:328328-328478:-1:exon
so has part: feature:323891-324012:-1:exon
so has part: feature:322657-322740:-1:exon

XP_041568947.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:357511-357540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351718-351771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348939-349058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:344346-344501:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340318-340381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338309-338451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:333671-333758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:331671-331786:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328328-328478:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:323891-324012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:322657-322740:-1:exon

POLD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: POLD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(359180..421224)
location: region:359180-421224:-1
so has part: feature:359180-421224:-1:exon
subclass of: SO_0000010

115491844
type: Gene
SIO_000068: ncbigene

position:359180:-1
position: 359180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421224:-1
position: 421224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359180-421224:-1:exon

POLD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: POLD1
product: DNA polymerase delta 1, catalytic subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041713024.1
SIO_010081: POLD1
subclass of: SO_0000673
so part of: POLD1
location: complement(join(359180..359436,360553..360650,361046..361098,363218..363331,370427..370559,372387..372489,378379..378531,383048..383223,384711..384848,387247..387321,389337..389484,391392..391505,393483..393599,395853..395941,399400..399591,402568..402678,403907..404047,405053..405157,408520..408686,410772..410908,411542..411616,412530..412698,414813..414944,416497..416634,418481..418588,421024..421224))
location: region:359180-421224:-1
so has part: feature:421024-421224:-1:exon
so has part: feature:418481-418588:-1:exon
so has part: feature:416497-416634:-1:exon
so has part: feature:414813-414944:-1:exon
so has part: feature:412530-412698:-1:exon
so has part: feature:411542-411616:-1:exon
so has part: feature:410772-410908:-1:exon
so has part: feature:408520-408686:-1:exon
so has part: feature:405053-405157:-1:exon
so has part: feature:403907-404047:-1:exon
so has part: feature:402568-402678:-1:exon
so has part: feature:399400-399591:-1:exon
so has part: feature:395853-395941:-1:exon
so has part: feature:393483-393599:-1:exon
so has part: feature:391392-391505:-1:exon
so has part: feature:389337-389484:-1:exon
so has part: feature:387247-387321:-1:exon
so has part: feature:384711-384848:-1:exon
so has part: feature:383048-383223:-1:exon
so has part: feature:378379-378531:-1:exon
so has part: feature:372387-372489:-1:exon
so has part: feature:370427-370559:-1:exon
so has part: feature:363218-363331:-1:exon
so has part: feature:361046-361098:-1:exon
so has part: feature:360553-360650:-1:exon
so has part: feature:359180-359436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421024-421224:-1:exon

position:421024:-1
position: 421024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:418481-418588:-1:exon

position:418481:-1
position: 418481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418588:-1
position: 418588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:416497-416634:-1:exon

position:416497:-1
position: 416497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416634:-1
position: 416634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:414813-414944:-1:exon

position:414813:-1
position: 414813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414944:-1
position: 414944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:412530-412698:-1:exon

position:412530:-1
position: 412530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412698:-1
position: 412698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:411542-411616:-1:exon

position:411542:-1
position: 411542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411616:-1
position: 411616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:410772-410908:-1:exon

position:410772:-1
position: 410772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410908:-1
position: 410908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:408520-408686:-1:exon

position:408520:-1
position: 408520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408686:-1
position: 408686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:405053-405157:-1:exon

position:405053:-1
position: 405053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:405157:-1
position: 405157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:403907-404047:-1:exon

position:403907:-1
position: 403907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:404047:-1
position: 404047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:402568-402678:-1:exon

position:402568:-1
position: 402568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:402678:-1
position: 402678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:399400-399591:-1:exon

position:399400:-1
position: 399400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399591:-1
position: 399591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:395853-395941:-1:exon

position:395853:-1
position: 395853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:395941:-1
position: 395941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:393483-393599:-1:exon

position:393483:-1
position: 393483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393599:-1
position: 393599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:391392-391505:-1:exon

position:391392:-1
position: 391392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:391505:-1
position: 391505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:389337-389484:-1:exon

position:389337:-1
position: 389337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389484:-1
position: 389484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:387247-387321:-1:exon

position:387247:-1
position: 387247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387321:-1
position: 387321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:384711-384848:-1:exon

position:384711:-1
position: 384711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384848:-1
position: 384848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:383048-383223:-1:exon

position:383048:-1
position: 383048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383223:-1
position: 383223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:378379-378531:-1:exon

position:378379:-1
position: 378379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378531:-1
position: 378531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:372387-372489:-1:exon

position:372387:-1
position: 372387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372489:-1
position: 372489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:370427-370559:-1:exon

position:370427:-1
position: 370427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370559:-1
position: 370559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:363218-363331:-1:exon

position:363218:-1
position: 363218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363331:-1
position: 363331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:361046-361098:-1:exon

position:361046:-1
position: 361046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361098:-1
position: 361098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:360553-360650:-1:exon

position:360553:-1
position: 360553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360650:-1
position: 360650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:359180-359436:-1:exon

position:359436:-1
position: 359436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: POLD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase delta catalytic subunit
translation: MEPPKRPSGVPLGDLGGPKRPRGSPRGPSRFEQELAQLHREEEEEEEEEEEEQGQPPDPHRQPSGSLFVGDVPPKWRRPAPPPQPPETLTFLQLDIDHYVGVPPRGFPGWPHPSPILRMFGVTGEGHSVCLHLHGFSPYFYVLAPPGAGEAHLEPLERELEAALRREQRGGNPKFQPPKNVLGLTLVRKQSILGFQGGLQSLFVRVGVSLPRLVAPARRLLERGLRWGSLGVQPAPPYEANIDFEIRFMADSGLVGCCWVELPPGGFRWRGDPRASLCQLEADASWGALRGHPPEGAWLGLPPLRLLSLDIECAGRKGVFPEPQQDPVIAIAAVALRQGAREPFLRVVFTLRSCAALRGATVRSFESERELLQSWAEFVRIVDPDVVTGYNIHNFDLPYLIQRAQVLQVESFPYLGRVRGVPSQVRDSAFQSRQLGRREGKVVTTPGRVTLDMLQVLLREHKLRSYSLNAVSAHFLHEQKEDVPHGIITELQNGDAQTRRRLALYCLKDAMLPLRLLERLMTLVTLVEMARVTAVPLSYLLTRGQQVKVVAQLLRQAMQEDLLLPVVKSEGGEDFEGATVIEPLKGYYDAPIATLDFSSLYPSIMIAHNLCYTTLLPPGGAQKHGLGPQDFIRTPTGQLFVTPRVRRGVLPRVLEGLLAARSRVKAALVEEQDPERRQVLDGRQLALKVSANSVYGFTGAQAGRLPCLEISQSVTGFGRQMIEKTKQLVESEYPDVQVVYGDTDSVMCRLKVPSVPEAAALGRAVATWVSGHFPPPIRLEFEKVYLPYLLISKKRYAGLCFSGGSGGTPKLDCKGLEAVRRDNCPLAANLVTACLRRILLHRDPQGAVAHAQEVISDLLCNRIDISQLVITKELTRAASAYSAPQAHVALAERLRRRDPGSAPGLGDRVPYVIVSGARGQPAYERSEDPVFALEQNLPIDTRYYLEQQLSRPLLRIFEPILGEGRAQAVLLQGEHTRCKTLLTARSGALSAFTSKRSSCIGCRALLPHHGAVCDFCRQRESELYQKEVSQVWHLERSFSRLWSQCQRCQSSLLQDVLCSSRDCPIFYMRRKVQKDLEAQLELLRRFGTPQW
SIO_010081: POLD1
subclass of: SO_0000673
so part of: POLD1
location: complement(join(359340..359436,360553..360650,361046..361098,363218..363331,370427..370559,372387..372489,378379..378531,383048..383223,384711..384848,387247..387321,389337..389484,391392..391505,393483..393599,395853..395941,399400..399591,402568..402678,403907..404047,405053..405157,408520..408686,410772..410908,411542..411616,412530..412698,414813..414944,416497..416634,418481..418588,421024..421216))
location: region:359340-421216:-1
so has part: feature:421024-421216:-1:exon
so has part: feature:418481-418588:-1:exon
so has part: feature:416497-416634:-1:exon
so has part: feature:414813-414944:-1:exon
so has part: feature:412530-412698:-1:exon
so has part: feature:411542-411616:-1:exon
so has part: feature:410772-410908:-1:exon
so has part: feature:408520-408686:-1:exon
so has part: feature:405053-405157:-1:exon
so has part: feature:403907-404047:-1:exon
so has part: feature:402568-402678:-1:exon
so has part: feature:399400-399591:-1:exon
so has part: feature:395853-395941:-1:exon
so has part: feature:393483-393599:-1:exon
so has part: feature:391392-391505:-1:exon
so has part: feature:389337-389484:-1:exon
so has part: feature:387247-387321:-1:exon
so has part: feature:384711-384848:-1:exon
so has part: feature:383048-383223:-1:exon
so has part: feature:378379-378531:-1:exon
so has part: feature:372387-372489:-1:exon
so has part: feature:370427-370559:-1:exon
so has part: feature:363218-363331:-1:exon
so has part: feature:361046-361098:-1:exon
so has part: feature:360553-360650:-1:exon
so has part: feature:359340-359436:-1:exon

XP_041568958.1
type: Protein
SIO_000068: ncbiprotein

position:359340:-1
position: 359340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421216:-1
position: 421216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421024-421216:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:418481-418588:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:416497-416634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414813-414944:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412530-412698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411542-411616:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:410772-410908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:408520-408686:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:405053-405157:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:403907-404047:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:402568-402678:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:399400-399591:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:395853-395941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:393483-393599:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:391392-391505:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:389337-389484:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:387247-387321:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:384711-384848:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:383048-383223:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:378379-378531:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:372387-372489:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:370427-370559:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:363218-363331:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:361046-361098:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:360553-360650:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:359340-359436:-1:exon

RPS9
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: RPS9
note: ribosomal protein S9; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(425795..440390)
location: region:425795-440390:-1
so has part: feature:425795-440390:-1:exon
subclass of: SO_0000010

100189936
type: Gene
SIO_000068: ncbigene

position:425795:-1
position: 425795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440390:-1
position: 440390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425795-440390:-1:exon

RPS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPS9
product: ribosomal protein S9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 31 ESTs, 4 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_041712924.1
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(425795..425865,427561..427775,432380..432566,435565..435687,436625..436729,437996..438086,440374..440390))
location: region:425795-440390:-1
so has part: feature:440374-440390:-1:exon
so has part: feature:437996-438086:-1:exon
so has part: feature:436625-436729:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:427561-427775:-1:exon
so has part: feature:425795-425865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440374-440390:-1:exon

position:440374:-1
position: 440374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437996-438086:-1:exon

position:437996:-1
position: 437996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438086:-1
position: 438086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436625-436729:-1:exon

position:436625:-1
position: 436625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436729:-1
position: 436729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:435565-435687:-1:exon

position:435565:-1
position: 435565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435687:-1
position: 435687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:432380-432566:-1:exon

position:432380:-1
position: 432380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432566:-1
position: 432566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:427561-427775:-1:exon

position:427561:-1
position: 427561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427775:-1
position: 427775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:425795-425865:-1:exon

position:425865:-1
position: 425865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPS9
product: ribosomal protein S9
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245782.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 13 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245782.1
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(425795..425865,427561..427775,432380..432566,435565..435687,436625..436729,437996..438029))
location: region:425795-438029:-1
so has part: feature:437996-438029:-1:exon
so has part: feature:436625-436729:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:427561-427775:-1:exon
so has part: feature:425795-425865:-1:exon

position:438029:-1
position: 438029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437996-438029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436625-436729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432380-432566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427561-427775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425795-425865:-1:exon

RPS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPS9
product: ribosomal protein S9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 2 long SRA reads, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_041712925.1
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(425795..425865,427561..427775,432380..432566,435565..435687,436625..436729,437815..438025))
location: region:425795-438025:-1
so has part: feature:437815-438025:-1:exon
so has part: feature:436625-436729:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:427561-427775:-1:exon
so has part: feature:425795-425865:-1:exon

position:438025:-1
position: 438025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437815-438025:-1:exon

position:437815:-1
position: 437815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:436625-436729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432380-432566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427561-427775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425795-425865:-1:exon

RPS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPS9
product: ribosomal protein S9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs, 1 long SRA read, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_041712926.1
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(425795..425865,427561..427775,432380..432566,435565..435687,436625..436729,437359..437378))
location: region:425795-437378:-1
so has part: feature:437359-437378:-1:exon
so has part: feature:436625-436729:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:427561-427775:-1:exon
so has part: feature:425795-425865:-1:exon

position:437378:-1
position: 437378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437359-437378:-1:exon

position:437359:-1
position: 437359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:436625-436729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432380-432566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427561-427775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:425795-425865:-1:exon

LOC121468880
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468880
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(425939..426025)
location: region:425939-426025:-1
so has part: feature:425939-426025:-1:exon
subclass of: SO_0000578

121468880
type: Gene
SIO_000068: ncbigene

position:425939:-1
position: 425939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426025:-1
position: 426025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425939-426025:-1:exon

LOC121468880
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: snoRNA
gene: LOC121468880
product: small nucleolar RNA SNORD88
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00604
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005978641.1
SIO_010081: LOC121468880
subclass of: SO_0000673
so part of: LOC121468880
location: complement(425939..426025)
location: region:425939-426025:-1
so has part: feature:425939-426025:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425939-426025:-1:exon

RPS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S9 isoform X1
translation: MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGGAEDEEED
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(427598..427775,432380..432566,435565..435687,436625..436721))
location: region:427598-436721:-1
so has part: feature:436625-436721:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:427598-427775:-1:exon

XP_041568858.1
type: Protein
SIO_000068: ncbiprotein

position:427598:-1
position: 427598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436721:-1
position: 436721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436625-436721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432380-432566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427598-427775:-1:exon

RPS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S9 isoform X1
translation: MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGGAEDEEED
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(427598..427775,432380..432566,435565..435687,436625..436721))
location: region:427598-436721:-1
so has part: feature:436625-436721:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:427598-427775:-1:exon

XP_041568859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436625-436721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432380-432566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427598-427775:-1:exon

RPS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S9 isoform X1
translation: MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGGAEDEEED
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(427598..427775,432380..432566,435565..435687,436625..436721))
location: region:427598-436721:-1
so has part: feature:436625-436721:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:427598-427775:-1:exon

XP_041568860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436625-436721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432380-432566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427598-427775:-1:exon

RPS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPS9
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: 40S ribosomal protein S9
translation: MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGGAEDEEED
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(427598..427775,432380..432566,435565..435687,436625..436721))
location: region:427598-436721:-1
so has part: feature:436625-436721:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:427598-427775:-1:exon

NP_001232711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:436625-436721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432380-432566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:427598-427775:-1:exon

RPS9
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: RPS9
product: ribosomal protein S9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005978576.1
SIO_010081: RPS9
so part of: RPS9
location: complement(join(427600..427775,431697..431842,432256..432566,435565..435687,436625..436729,437996..438100))
location: region:427600-438100:-1
so has part: feature:437996-438100:-1:exon
so has part: feature:436625-436729:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432256-432566:-1:exon
so has part: feature:431697-431842:-1:exon
so has part: feature:427600-427775:-1:exon

position:427600:-1
position: 427600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438100:-1
position: 438100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437996-438100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436625-436729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432256-432566:-1:exon

position:432256:-1
position: 432256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431697-431842:-1:exon

position:431697:-1
position: 431697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431842:-1
position: 431842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:427600-427775:-1:exon

RPS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPS9
product: ribosomal protein S9, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_041712928.1
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(427724..429892,432380..432566,435565..435687,436625..436729,437996..438100))
location: region:427724-438100:-1
so has part: feature:437996-438100:-1:exon
so has part: feature:436625-436729:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:427724-429892:-1:exon

position:427724:-1
position: 427724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437996-438100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436625-436729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432380-432566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427724-429892:-1:exon

position:429892:-1
position: 429892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S9 isoform X3
translation: MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPEPHPKKSRLCPVHPNSLPKM
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(429802..429892,432380..432566,435565..435687,436625..436721))
location: region:429802-436721:-1
so has part: feature:436625-436721:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432380-432566:-1:exon
so has part: feature:429802-429892:-1:exon

XP_041568862.1
type: Protein
SIO_000068: ncbiprotein

position:429802:-1
position: 429802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436625-436721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432380-432566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:429802-429892:-1:exon

RPS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: RPS9
product: ribosomal protein S9, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_041712927.1
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(431696..431842,432256..432566,435565..435687,436625..436729,437996..438100))
location: region:431696-438100:-1
so has part: feature:437996-438100:-1:exon
so has part: feature:436625-436729:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432256-432566:-1:exon
so has part: feature:431696-431842:-1:exon

position:431696:-1
position: 431696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437996-438100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436625-436729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432256-432566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431696-431842:-1:exon

RPS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: RPS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S9 isoform X2
translation: MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRWVPAKNPQILGEIPAFLGARQGLTAAPPYTLRRAAPKG
SIO_010081: RPS9
subclass of: SO_0000673
so part of: RPS9
location: complement(join(432262..432566,435565..435687,436625..436721))
location: region:432262-436721:-1
so has part: feature:436625-436721:-1:exon
so has part: feature:435565-435687:-1:exon
so has part: feature:432262-432566:-1:exon

XP_041568861.1
type: Protein
SIO_000068: ncbiprotein

position:432262:-1
position: 432262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436625-436721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435565-435687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432262-432566:-1:exon

LOC115491548
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC115491548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 442897..474972
location: region:442897-474972:1
so has part: feature:442897-474972:1:exon
subclass of: SO_0000010

115491548
type: Gene
SIO_000068: ncbigene

position:442897:1
position: 442897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474972:1
position: 474972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442897-474972:1:exon

LOC115491548
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC115491548
product: serine/threonine-protein kinase LMTK3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712962.1
SIO_010081: LOC115491548
subclass of: SO_0000673
so part of: LOC115491548
location: join(442897..443082,445300..445418,447332..447464,449622..449683,450946..451064,453101..453185,454279..454409,459521..459605,461518..461780,463917..464060,465018..466763,468480..468654,470692..470875,470936..471262,472925..473238,473320..473386,474809..474972)
location: region:442897-474972:1
so has part: feature:442897-443082:1:exon
so has part: feature:445300-445418:1:exon
so has part: feature:447332-447464:1:exon
so has part: feature:449622-449683:1:exon
so has part: feature:450946-451064:1:exon
so has part: feature:453101-453185:1:exon
so has part: feature:454279-454409:1:exon
so has part: feature:459521-459605:1:exon
so has part: feature:461518-461780:1:exon
so has part: feature:463917-464060:1:exon
so has part: feature:465018-466763:1:exon
so has part: feature:468480-468654:1:exon
so has part: feature:470692-470875:1:exon
so has part: feature:470936-471262:1:exon
so has part: feature:472925-473238:1:exon
so has part: feature:473320-473386:1:exon
so has part: feature:474809-474972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442897-443082:1:exon

position:443082:1
position: 443082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445300-445418:1:exon

position:445300:1
position: 445300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445418:1
position: 445418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447332-447464:1:exon

position:447332:1
position: 447332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447464:1
position: 447464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:449622-449683:1:exon

position:449622:1
position: 449622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449683:1
position: 449683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:450946-451064:1:exon

position:450946:1
position: 450946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451064:1
position: 451064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:453101-453185:1:exon

position:453101:1
position: 453101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453185:1
position: 453185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:454279-454409:1:exon

position:454279:1
position: 454279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454409:1
position: 454409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:459521-459605:1:exon

position:459521:1
position: 459521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459605:1
position: 459605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:461518-461780:1:exon

position:461518:1
position: 461518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:461780:1
position: 461780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:463917-464060:1:exon

position:463917:1
position: 463917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464060:1
position: 464060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:465018-466763:1:exon

position:465018:1
position: 465018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466763:1
position: 466763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:468480-468654:1:exon

position:468480:1
position: 468480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468654:1
position: 468654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:470692-470875:1:exon

position:470692:1
position: 470692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470875:1
position: 470875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:470936-471262:1:exon

position:470936:1
position: 470936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471262:1
position: 471262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:472925-473238:1:exon

position:472925:1
position: 472925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473238:1
position: 473238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:473320-473386:1:exon

position:473320:1
position: 473320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473386:1
position: 473386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:474809-474972:1:exon

position:474809:1
position: 474809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC115491548
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC115491548
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LMTK3-like
translation: MKWACPPWPRPPLAPPPLLAAMAALGAPSALGAPPARGSPPAGPPSAALLLSCSGLVAFVLLLLTCLCCKRGDLGFKELESPEGDEDSGEFSAPPEEFSSSSSSSCCAPPGVFVVPLEPPPAAPGPPQLSFLQEIGTAWFGKVILGELRGGPGPAPVVLKELRAGAETPERRRFLAEAEPYRRLRHPNLLRCLGGCRERPQLLVWEFCQLGDLKRYLRAQRGTGAPRDLGTLQRFALEVTRGLRHLHRHGFVHSDLALRNVLLSSELTARIGDYGLGPALYREDYFTGSGRAAPLPLRWMAPELLSRGTTETTEKTGKTEKTEKTEKTGKTEKTEKTEKTEKTEETGTLEGSEGSEVLEVAPHSPESNVWALGVTLWELLEWGSRPLPHLSDLQLLGRLRSRRPPELPRPRVALPPPWFDLLRSCRLPPSQRPTLEQLHRRLSALLAHPRTSPNPSPSPSSPSPSPASPFPLLDALPDNEDVLTVTQDPRGGALALECWWRRGRRRGDDAGTATGAVPVLGARSPSGTSEFYVRLEENEEMVEESARWGMGHGGGDNEGLSPARCRGRAGREGGVGQDRTLTQDRSLLTQEQTLTQDWSSLTQDRSLLGQDRSSLGQDRSSLGQEWTLLGQERSSLGQDRSSLGEDRSLLGQDRSLLGQDQTLTQDRTLLGQDRSLLGQDRTLFGQERSTARGTSPLSLEMTPRGQSRTLTQDRSVLTQDRTLTQDRSSLGQDRTLAQDRTLTQDRTLLGEDWSLLGQDRSSLGQDRSLLTQDRTLTQDRSSLGQDQTLTQDRSLLTQDRTLTQDRSVLGQDRSSLGQDRSLFTQDRTLAQDRSLLGQDRTVTQDRSLLTQDRSSLGQDWSLTEDRSSLGQDRSLAQNRSSLAQGRSLLAQDWSPLGQDRSSLGQERSTSQGTSPLSFEMTPRGQSRTLAQDRSSLGQDRSLAQDRSSLGQDRSSTQDRSLLGEDRSSLGQDQTLLGQERSLLTQDRTLTQDRSSLGQDRSLSPLSPEVAPWGQNRTLLGQDWSTTEGTSPLSLEMTPRGQSRTLTQEPPPVPPRTSPVSPMSPSATQVSPSATQVSPGVSHLSPAVPQVSPGVSQVSQERLQRSLTEGVSRHILPRPPGGGACVETGGVASTVGGACVKTGGVASTVGVVSAVGGASTVGVACSGEGGVVSAVGGGVASAVGVACSGEGGVVSAVGVASGGGGGGGGRSGDPPGPSPTPRGSSAEIRAKASRLSLPLPPLTLRPLPPRWGSADPSGAAPDEADEAEEAAGEAAEAAGAAPLRVPLVVSSWTARGLRGLLKPPRRPPEAALSADRKRKAVSFFDDVTVHLFDQETPTNELSGQSGPEGRAPSGGLAAVEN
SIO_010081: LOC115491548
subclass of: SO_0000673
so part of: LOC115491548
location: join(442971..443082,445300..445418,447332..447464,449622..449683,450946..451064,453101..453185,454279..454409,459521..459605,461518..461780,463917..464060,465018..466763,468480..468654,470692..470875,470936..471262,472925..473238,473320..473386,474809..474825)
location: region:442971-474825:1
so has part: feature:442971-443082:1:exon
so has part: feature:445300-445418:1:exon
so has part: feature:447332-447464:1:exon
so has part: feature:449622-449683:1:exon
so has part: feature:450946-451064:1:exon
so has part: feature:453101-453185:1:exon
so has part: feature:454279-454409:1:exon
so has part: feature:459521-459605:1:exon
so has part: feature:461518-461780:1:exon
so has part: feature:463917-464060:1:exon
so has part: feature:465018-466763:1:exon
so has part: feature:468480-468654:1:exon
so has part: feature:470692-470875:1:exon
so has part: feature:470936-471262:1:exon
so has part: feature:472925-473238:1:exon
so has part: feature:473320-473386:1:exon
so has part: feature:474809-474825:1:exon

XP_041568896.1
type: Protein
SIO_000068: ncbiprotein

position:442971:1
position: 442971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474825:1
position: 474825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442971-443082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445300-445418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447332-447464:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449622-449683:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450946-451064:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453101-453185:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:454279-454409:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:459521-459605:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:461518-461780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:463917-464060:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:465018-466763:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:468480-468654:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:470692-470875:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:470936-471262:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:472925-473238:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:473320-473386:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:474809-474825:1:exon

LOC121468850
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(487386..510842)
location: region:487386-510842:-1
so has part: feature:487386-510842:-1:exon
subclass of: SO_0000010

121468850
type: Gene
SIO_000068: ncbigene

position:487386:-1
position: 487386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510842:-1
position: 510842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487386-510842:-1:exon

LOC121468850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468850
product: cytohesin-2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_041713022.1
SIO_010081: LOC121468850
subclass of: SO_0000673
so part of: LOC121468850
location: complement(join(487386..487482,489525..489679,490812..490883,492431..492509,494994..495106,497325..497473,502243..502355,503368..503448,505282..505400,507334..507400,508976..509123,510724..510842))
location: region:487386-510842:-1
so has part: feature:510724-510842:-1:exon
so has part: feature:508976-509123:-1:exon
so has part: feature:507334-507400:-1:exon
so has part: feature:505282-505400:-1:exon
so has part: feature:503368-503448:-1:exon
so has part: feature:502243-502355:-1:exon
so has part: feature:497325-497473:-1:exon
so has part: feature:494994-495106:-1:exon
so has part: feature:492431-492509:-1:exon
so has part: feature:490812-490883:-1:exon
so has part: feature:489525-489679:-1:exon
so has part: feature:487386-487482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510724-510842:-1:exon

position:510724:-1
position: 510724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:508976-509123:-1:exon

position:508976:-1
position: 508976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509123:-1
position: 509123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:507334-507400:-1:exon

position:507334:-1
position: 507334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507400:-1
position: 507400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:505282-505400:-1:exon

position:505282:-1
position: 505282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505400:-1
position: 505400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:503368-503448:-1:exon

position:503368:-1
position: 503368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503448:-1
position: 503448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:502243-502355:-1:exon

position:502243:-1
position: 502243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502355:-1
position: 502355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:497325-497473:-1:exon

position:497325:-1
position: 497325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497473:-1
position: 497473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:494994-495106:-1:exon

position:494994:-1
position: 494994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495106:-1
position: 495106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:492431-492509:-1:exon

position:492431:-1
position: 492431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492509:-1
position: 492509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:490812-490883:-1:exon

position:490812:-1
position: 490812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490883:-1
position: 490883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:489525-489679:-1:exon

position:489525:-1
position: 489525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489679:-1
position: 489679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:487386-487482:-1:exon

position:487482:-1
position: 487482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytohesin-2 isoform X1
translation: MEDGVYVPPDLSPEERRELESIRRRKQELLGEIRRLREELSDAITEVEGLEATEGSKTLQRNRKMGMGRKKFNMDPKKGIQFLVEQELLRHTAEDIARFLYKGEGLNKTAIGDYLGEREEFNLGVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFTCTDTCYVLSFAVIMLNTSLHNPNVRDKPSAERFVAMNRGINDGGDLPEELLRNLYESIRSEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPHCFELYIPNSRGQLIKACKTEADGRVVEGNHAVYRISAPTREQKDEWIKSIQAAVSVDPFYEMLAARKKRISVKKKPENP
SIO_010081: LOC121468850
subclass of: SO_0000673
so part of: LOC121468850
location: complement(join(487395..487482,489525..489679,490812..490883,492431..492509,494994..495106,497325..497473,502243..502355,503368..503448,505282..505400,507334..507400,508976..509123,510724..510742))
location: region:487395-510742:-1
so has part: feature:510724-510742:-1:exon
so has part: feature:508976-509123:-1:exon
so has part: feature:507334-507400:-1:exon
so has part: feature:505282-505400:-1:exon
so has part: feature:503368-503448:-1:exon
so has part: feature:502243-502355:-1:exon
so has part: feature:497325-497473:-1:exon
so has part: feature:494994-495106:-1:exon
so has part: feature:492431-492509:-1:exon
so has part: feature:490812-490883:-1:exon
so has part: feature:489525-489679:-1:exon
so has part: feature:487395-487482:-1:exon

XP_041568956.1
type: Protein
SIO_000068: ncbiprotein

position:487395:-1
position: 487395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510742:-1
position: 510742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510724-510742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508976-509123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507334-507400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505282-505400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503368-503448:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502243-502355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497325-497473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494994-495106:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492431-492509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:490812-490883:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489525-489679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:487395-487482:-1:exon

LOC121468850
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468850
product: cytohesin-2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_041713023.1
SIO_010081: LOC121468850
subclass of: SO_0000673
so part of: LOC121468850
location: complement(join(488742..488987,489548..489679,490812..490883,492431..492509,494994..495106,497325..497473,502243..502355,503368..503448,505282..505400,507334..507400,508976..509123,510724..510842))
location: region:488742-510842:-1
so has part: feature:510724-510842:-1:exon
so has part: feature:508976-509123:-1:exon
so has part: feature:507334-507400:-1:exon
so has part: feature:505282-505400:-1:exon
so has part: feature:503368-503448:-1:exon
so has part: feature:502243-502355:-1:exon
so has part: feature:497325-497473:-1:exon
so has part: feature:494994-495106:-1:exon
so has part: feature:492431-492509:-1:exon
so has part: feature:490812-490883:-1:exon
so has part: feature:489548-489679:-1:exon
so has part: feature:488742-488987:-1:exon

position:488742:-1
position: 488742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510724-510842:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508976-509123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507334-507400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505282-505400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503368-503448:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502243-502355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497325-497473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494994-495106:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492431-492509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:490812-490883:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489548-489679:-1:exon

position:489548:-1
position: 489548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:488742-488987:-1:exon

position:488987:-1
position: 488987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468850
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytohesin-2 isoform X2
translation: MEDGVYVPPDLSPEERRELESIRRRKQELLGEIRRLREELSDAITEVEGLEATEGSKTLQRNRKMGMGRKKFNMDPKKGIQFLVEQELLRHTAEDIARFLYKGEGLNKTAIGDYLGEREEFNLGVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDRMMEAFAQRYCLCNPGVFTCTDTCYVLSFAVIMLNTSLHNPNVRDKPSAERFVAMNRGINDGGDLPEELLRNLYESIRSEPFKIPEDDGNDLTHTFFNPDREGWLLKLGGGRVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVEDPRKPHCFELYIPNSRGQLIKACKTEADGRVVEGNHAVYRISAPTREQKDEWIKSIQ
SIO_010081: LOC121468850
subclass of: SO_0000673
so part of: LOC121468850
location: complement(join(488961..488987,489548..489679,490812..490883,492431..492509,494994..495106,497325..497473,502243..502355,503368..503448,505282..505400,507334..507400,508976..509123,510724..510742))
location: region:488961-510742:-1
so has part: feature:510724-510742:-1:exon
so has part: feature:508976-509123:-1:exon
so has part: feature:507334-507400:-1:exon
so has part: feature:505282-505400:-1:exon
so has part: feature:503368-503448:-1:exon
so has part: feature:502243-502355:-1:exon
so has part: feature:497325-497473:-1:exon
so has part: feature:494994-495106:-1:exon
so has part: feature:492431-492509:-1:exon
so has part: feature:490812-490883:-1:exon
so has part: feature:489548-489679:-1:exon
so has part: feature:488961-488987:-1:exon

XP_041568957.1
type: Protein
SIO_000068: ncbiprotein

position:488961:-1
position: 488961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510724-510742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:508976-509123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:507334-507400:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505282-505400:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503368-503448:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502243-502355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497325-497473:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494994-495106:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492431-492509:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:490812-490883:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489548-489679:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488961-488987:-1:exon

LOC121468866
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(512531..513884)
location: region:512531-513884:-1
so has part: feature:512531-513884:-1:exon
subclass of: SO_0000010

121468866
type: Gene
SIO_000068: ncbigene

position:512531:-1
position: 512531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513884:-1
position: 513884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:512531-513884:-1:exon

LOC121468866
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468866
product: uncharacterized LOC121468866
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041713056.1
SIO_010081: LOC121468866
subclass of: SO_0000673
so part of: LOC121468866
location: complement(join(512531..513427,513524..513884))
location: region:512531-513884:-1
so has part: feature:513524-513884:-1:exon
so has part: feature:512531-513427:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:513524-513884:-1:exon

position:513524:-1
position: 513524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:512531-513427:-1:exon

position:513427:-1
position: 513427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468866
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468866
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC121468866
translation: MGPPGCPTSTDQFGPVWTSLDQSGPVWTSLDQFGPISLDQFGPVWPSIPQFPAPVWTSLDQFDPISLDQFGPVIPSFLDQFVPVWTSLAQFPWTNLDQFGPISMDQSGPVTPAFLHQFGPVWPNFHGPVWTSLDQFGPISPSFLDQFGPVTPNFLHQFVPVWTSLAQFPPVSCTSLDQFGPVIPSFLDQFGPVWPNFPGPVCPSLDQYPPISWTNLDQFVPVWTSWAQFPWTSLDQ
SIO_010081: LOC121468866
subclass of: SO_0000673
so part of: LOC121468866
location: complement(join(512930..513427,513524..513736))
location: region:512930-513736:-1
so has part: feature:513524-513736:-1:exon
so has part: feature:512930-513427:-1:exon

XP_041568990.1
type: Protein
SIO_000068: ncbiprotein

position:512930:-1
position: 512930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513736:-1
position: 513736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:513524-513736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:512930-513427:-1:exon

CACNG8
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CACNG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516716..524343)
location: region:516716-524343:-1
so has part: feature:516716-524343:-1:exon
subclass of: SO_0000010

121468817
type: Gene
SIO_000068: ncbigene

position:516716:-1
position: 516716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524343:-1
position: 524343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516716-524343:-1:exon

CACNG8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG8
product: calcium voltage-gated channel auxiliary subunit gamma 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712963.1
SIO_010081: CACNG8
subclass of: SO_0000673
so part of: CACNG8
location: complement(join(516716..516768,517570..517638,520764..520904,523347..523430,524047..524343))
location: region:516716-524343:-1
so has part: feature:524047-524343:-1:exon
so has part: feature:523347-523430:-1:exon
so has part: feature:520764-520904:-1:exon
so has part: feature:517570-517638:-1:exon
so has part: feature:516716-516768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:524047-524343:-1:exon

position:524047:-1
position: 524047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:523347-523430:-1:exon

position:523347:-1
position: 523347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523430:-1
position: 523430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520764-520904:-1:exon

position:520764:-1
position: 520764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520904:-1
position: 520904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:517570-517638:-1:exon

position:517570:-1
position: 517570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517638:-1
position: 517638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:516716-516768:-1:exon

position:516768:-1
position: 516768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNG8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-8 subunit
translation: MAIAIGTDYWLYARARVCNATTGVTGVTGATNVTNGATNGATNGAALGAALAHGGLTHSGLWRVCCLEGLKRGLCLRINHFPEDLEYDHDSAEYLLRVVRASSIFPILSAVLLLLGGLCVAASRLRRARTSLVLGAGILFVAAGLSNIIGVIVSIIPPFLKIIFFTCLSNIIGVIVSIIPALF
SIO_010081: CACNG8
subclass of: SO_0000673
so part of: CACNG8
location: complement(join(516716..516768,517570..517638,520764..520904,523347..523430,524047..524251))
location: region:516716-524251:-1
so has part: feature:524047-524251:-1:exon
so has part: feature:523347-523430:-1:exon
so has part: feature:520764-520904:-1:exon
so has part: feature:517570-517638:-1:exon
so has part: feature:516716-516768:-1:exon

XP_041568897.1
type: Protein
SIO_000068: ncbiprotein

position:524251:-1
position: 524251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:524047-524251:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:523347-523430:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520764-520904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517570-517638:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:516716-516768:-1:exon

LOC121468844
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(525232..525945)
location: region:525232-525945:-1
so has part: feature:525232-525945:-1:exon
subclass of: SO_0000011

121468844
type: Gene
SIO_000068: ncbigene

position:525232:-1
position: 525232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525945:-1
position: 525945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525232-525945:-1:exon

LOC121468844
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468844
product: uncharacterized LOC121468844
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XR_005978629.1
SIO_010081: LOC121468844
subclass of: SO_0000673
so part of: LOC121468844
location: complement(join(525232..525283,525741..525945))
location: region:525232-525945:-1
so has part: feature:525741-525945:-1:exon
so has part: feature:525232-525283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525741-525945:-1:exon

position:525741:-1
position: 525741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:525232-525283:-1:exon

position:525283:-1
position: 525283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468841
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 527784..528362
location: region:527784-528362:1
so has part: feature:527784-528362:1:exon
subclass of: SO_0000011

121468841
type: Gene
SIO_000068: ncbigene

position:527784:1
position: 527784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528362:1
position: 528362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527784-528362:1:exon

LOC121468841
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468841
product: uncharacterized LOC121468841
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_005978627.1
SIO_010081: LOC121468841
subclass of: SO_0000673
so part of: LOC121468841
location: join(527784..527862,527915..528362)
location: region:527784-528362:1
so has part: feature:527784-527862:1:exon
so has part: feature:527915-528362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527784-527862:1:exon

position:527862:1
position: 527862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:527915-528362:1:exon

position:527915:1
position: 527915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468840
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 528545..529967
location: region:528545-529967:1
so has part: feature:528545-529967:1:exon
subclass of: SO_0000011

121468840
type: Gene
SIO_000068: ncbigene

position:528545:1
position: 528545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529967:1
position: 529967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528545-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005978621.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528545..528661,529232..529293,529388..529510,529543..529740,529772..529967)
location: region:528545-529967:1
so has part: feature:528545-528661:1:exon
so has part: feature:529232-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528545-528661:1:exon

position:528661:1
position: 528661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529232-529293:1:exon

position:529232:1
position: 529232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529293:1
position: 529293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

position:529388:1
position: 529388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529510:1
position: 529510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

position:529543:1
position: 529543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529740:1
position: 529740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

position:529772:1
position: 529772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005978604.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528654..528672,529056..529190,529388..529510,529543..529740,529772..529967)
location: region:528654-529967:1
so has part: feature:528654-528672:1:exon
so has part: feature:529056-529190:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:528654:1
position: 528654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528654-528672:1:exon

position:528672:1
position: 528672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529056-529190:1:exon

position:529056:1
position: 529056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529190:1
position: 529190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005978619.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528655..528672,529212..529293,529388..529510,529543..529740,529772..529967)
location: region:528655-529967:1
so has part: feature:528655-528672:1:exon
so has part: feature:529212-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:528655:1
position: 528655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528655-528672:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529212-529293:1:exon

position:529212:1
position: 529212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005978620.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528681..528714,529212..529293,529388..529510,529543..529740,529772..529967)
location: region:528681-529967:1
so has part: feature:528681-528714:1:exon
so has part: feature:529212-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:528681:1
position: 528681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528681-528714:1:exon

position:528714:1
position: 528714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529212-529293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005978603.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528688..528724,529056..529190,529388..529510,529543..529740,529772..529967)
location: region:528688-529967:1
so has part: feature:528688-528724:1:exon
so has part: feature:529056-529190:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:528688:1
position: 528688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528688-528724:1:exon

position:528724:1
position: 528724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529056-529190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005978606.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528688..528724,529056..529169,529212..529293,529388..529510,529543..529740,529772..529967)
location: region:528688-529967:1
so has part: feature:528688-528724:1:exon
so has part: feature:529056-529169:1:exon
so has part: feature:529212-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528688-528724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529056-529169:1:exon

position:529169:1
position: 529169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529212-529293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005978605.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528741..528765,529056..529190,529388..529510,529543..529740,529772..529967)
location: region:528741-529967:1
so has part: feature:528741-528765:1:exon
so has part: feature:529056-529190:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:528741:1
position: 528741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528741-528765:1:exon

position:528765:1
position: 528765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529056-529190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005978610.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528741..528765,529056..529169,529212..529293,529388..529510,529543..529740,529772..529967)
location: region:528741-529967:1
so has part: feature:528741-528765:1:exon
so has part: feature:529056-529169:1:exon
so has part: feature:529212-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528741-528765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529056-529169:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529212-529293:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005978607.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528741..528765,529056..529159,529273..529293,529398..529510,529543..529740,529772..529967)
location: region:528741-529967:1
so has part: feature:528741-528765:1:exon
so has part: feature:529056-529159:1:exon
so has part: feature:529273-529293:1:exon
so has part: feature:529398-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528741-528765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529056-529159:1:exon

position:529159:1
position: 529159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529273-529293:1:exon

position:529273:1
position: 529273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:529398-529510:1:exon

position:529398:1
position: 529398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005978612.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528741..528765,529056..529149,529252..529293,529388..529510,529543..529740,529772..529967)
location: region:528741-529967:1
so has part: feature:528741-528765:1:exon
so has part: feature:529056-529149:1:exon
so has part: feature:529252-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528741-528765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529056-529149:1:exon

position:529149:1
position: 529149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529252-529293:1:exon

position:529252:1
position: 529252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005978623.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528757..528796,529232..529293,529388..529510,529543..529740,529772..529967)
location: region:528757-529967:1
so has part: feature:528757-528796:1:exon
so has part: feature:529232-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:528757:1
position: 528757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528757-528796:1:exon

position:528796:1
position: 528796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529232-529293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005978622.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(528926..528963,529232..529293,529388..529510,529543..529740,529772..529967)
location: region:528926-529967:1
so has part: feature:528926-528963:1:exon
so has part: feature:529232-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:528926:1
position: 528926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528926-528963:1:exon

position:528963:1
position: 528963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529232-529293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

CACNG7
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(528960..545063)
location: region:528960-545063:-1
so has part: feature:528960-545063:-1:exon
subclass of: SO_0000010

121468839
type: Gene
SIO_000068: ncbigene

position:528960:-1
position: 528960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545063:-1
position: 545063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528960-545063:-1:exon

CACNG7
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005978601.1
SIO_010081: CACNG7
so part of: CACNG7
location: complement(join(528960..528979,529870..530202,534416..534561,537057..537197,537962..538048,541131..541334,544911..545062))
location: region:528960-545062:-1
so has part: feature:544911-545062:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:529870-530202:-1:exon
so has part: feature:528960-528979:-1:exon

position:545062:-1
position: 545062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545062:-1:exon

position:544911:-1
position: 544911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

position:541131:-1
position: 541131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541334:-1
position: 541334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

position:537962:-1
position: 537962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538048:-1
position: 538048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

position:537057:-1
position: 537057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537197:-1
position: 537197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

position:534416:-1
position: 534416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534561:-1
position: 534561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:529870-530202:-1:exon

position:529870:-1
position: 529870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530202:-1
position: 530202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:528960-528979:-1:exon

position:528979:-1
position: 528979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005978618.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529033..529065,529212..529293,529388..529510,529543..529740,529772..529967)
location: region:529033-529967:1
so has part: feature:529033-529065:1:exon
so has part: feature:529212-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:529033:1
position: 529033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529033-529065:1:exon

position:529065:1
position: 529065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529212-529293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005978611.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529071..529159,529273..529293,529388..529510,529543..529740,529772..529967)
location: region:529071-529967:1
so has part: feature:529071-529159:1:exon
so has part: feature:529273-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:529071:1
position: 529071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529071-529159:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529273-529293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005978609.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529073..529149,529242..529293,529388..529510,529543..529740,529772..529967)
location: region:529073-529967:1
so has part: feature:529073-529149:1:exon
so has part: feature:529242-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:529073:1
position: 529073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529073-529149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529242-529293:1:exon

position:529242:1
position: 529242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005978608.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529083..529169,529212..529293,529398..529510,529543..529740,529772..529967)
location: region:529083-529967:1
so has part: feature:529083-529169:1:exon
so has part: feature:529212-529293:1:exon
so has part: feature:529398-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:529083:1
position: 529083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529083-529169:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529212-529293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529398-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005978616.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529088..529149,529222..529293,529388..529510,529543..529740,529772..529967)
location: region:529088-529967:1
so has part: feature:529088-529149:1:exon
so has part: feature:529222-529293:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:529088:1
position: 529088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529088-529149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529222-529293:1:exon

position:529222:1
position: 529222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005978617.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529134..529149,529325..529510,529543..529740,529772..529967)
location: region:529134-529967:1
so has part: feature:529134-529149:1:exon
so has part: feature:529325-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:529134:1
position: 529134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529134-529149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529325-529510:1:exon

position:529325:1
position: 529325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_005978614.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529134..529149,529335..529510,529543..529740,529772..529967)
location: region:529134-529967:1
so has part: feature:529134-529149:1:exon
so has part: feature:529335-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529134-529149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529335-529510:1:exon

position:529335:1
position: 529335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005978602.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529135..529190,529388..529510,529543..529740,529772..529863,529906..529967)
location: region:529135-529967:1
so has part: feature:529135-529190:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529863:1:exon
so has part: feature:529906-529967:1:exon

position:529135:1
position: 529135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529135-529190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529772-529863:1:exon

position:529863:1
position: 529863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529906-529967:1:exon

position:529906:1
position: 529906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005978615.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529135..529190,529388..529510,529543..529740,529772..529863,529916..529967)
location: region:529135-529967:1
so has part: feature:529135-529190:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529863:1:exon
so has part: feature:529916-529967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529135-529190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529772-529863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529916-529967:1:exon

position:529916:1
position: 529916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005978626.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529135..529190,529388..529510,529543..529698,529885..529967)
location: region:529135-529967:1
so has part: feature:529135-529190:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529698:1:exon
so has part: feature:529885-529967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:529135-529190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529543-529698:1:exon

position:529698:1
position: 529698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:529885-529967:1:exon

position:529885:1
position: 529885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005978625.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529165..529211,529398..529510,529543..529740,529772..529967)
location: region:529165-529967:1
so has part: feature:529165-529211:1:exon
so has part: feature:529398-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:529165:1
position: 529165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529165-529211:1:exon

position:529211:1
position: 529211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529398-529510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529772-529967:1:exon

LOC121468840
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468840
product: uncharacterized LOC121468840, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005978624.1
SIO_010081: LOC121468840
subclass of: SO_0000673
so part of: LOC121468840
location: join(529194..529211,529388..529510,529543..529740,529772..529967)
location: region:529194-529967:1
so has part: feature:529194-529211:1:exon
so has part: feature:529388-529510:1:exon
so has part: feature:529543-529740:1:exon
so has part: feature:529772-529967:1:exon

position:529194:1
position: 529194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529194-529211:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529388-529510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:529543-529740:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529772-529967:1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712999.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529393..529528,529913..530202,534416..534561,537057..537197,537962..538048,541131..541334,544911..545062))
location: region:529393-545062:-1
so has part: feature:544911-545062:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:529913-530202:-1:exon
so has part: feature:529393-529528:-1:exon

position:529393:-1
position: 529393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529913-530202:-1:exon

position:529913:-1
position: 529913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:529393-529528:-1:exon

position:529528:-1
position: 529528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712995.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529570..529704,529870..530202,530269..530330,530699..530769,531074..531142,534416..534561,537057..537197,537962..538048,541131..541334,544911..545063))
location: region:529570-545063:-1
so has part: feature:544911-545063:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531074-531142:-1:exon
so has part: feature:530699-530769:-1:exon
so has part: feature:530269-530330:-1:exon
so has part: feature:529870-530202:-1:exon
so has part: feature:529570-529704:-1:exon

position:529570:-1
position: 529570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531074-531142:-1:exon

position:531074:-1
position: 531074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531142:-1
position: 531142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:530699-530769:-1:exon

position:530699:-1
position: 530699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530769:-1
position: 530769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:530269-530330:-1:exon

position:530269:-1
position: 530269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530330:-1
position: 530330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:529870-530202:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:529570-529704:-1:exon

position:529704:-1
position: 529704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X1
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEEPCHTQVYPGAHRCVTGVSQVYFSLSAGRRCDVGVPVHQALRRGGAVSHTGRRCDVGVPVHQALRRGGAVPGTAAAPAAAPQHLLGAVGAIPAAAGVAPPPQRLRRLQRRLHPDEPKLPPGDKVPPEIGATPSPVHITLLGHTWAHLGTPGYVYDTPECVYDTPECVYGTARTTPRG
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529655..529704,529870..530202,530269..530330,530699..530769,531074..531142,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:529655-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531074-531142:-1:exon
so has part: feature:530699-530769:-1:exon
so has part: feature:530269-530330:-1:exon
so has part: feature:529870-530202:-1:exon
so has part: feature:529655-529704:-1:exon

XP_041568929.1
type: Protein
SIO_000068: ncbiprotein

position:529655:-1
position: 529655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541326:-1
position: 541326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531074-531142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530699-530769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530269-530330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:529870-530202:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529655-529704:-1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041712996.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529731..529863,530009..530202,530269..530330,530699..530769,531074..531142,534416..534561,537057..537197,537962..538048,541131..541334,544911..545063))
location: region:529731-545063:-1
so has part: feature:544911-545063:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531074-531142:-1:exon
so has part: feature:530699-530769:-1:exon
so has part: feature:530269-530330:-1:exon
so has part: feature:530009-530202:-1:exon
so has part: feature:529731-529863:-1:exon

position:529731:-1
position: 529731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531074-531142:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530699-530769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:530269-530330:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:530009-530202:-1:exon

position:530009:-1
position: 530009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:529731-529863:-1:exon

position:529863:-1
position: 529863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X2
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEEPCHTQVYPGAHRCVTGVSQVYFSLSAGRRCDVGVPVHQALRRGGAVSHTGRRCDVGVPVHQALRRGGAVPGTAAAPAAAPQHLLGAVGAIPAAAGVAPPPQRLRRLQRRLHPDEPELPPGDKVPPERGATPSPVHITLLGAPGHT
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529768..529863,530009..530202,530269..530330,530699..530769,531074..531142,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:529768-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531074-531142:-1:exon
so has part: feature:530699-530769:-1:exon
so has part: feature:530269-530330:-1:exon
so has part: feature:530009-530202:-1:exon
so has part: feature:529768-529863:-1:exon

XP_041568930.1
type: Protein
SIO_000068: ncbiprotein

position:529768:-1
position: 529768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531074-531142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530699-530769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530269-530330:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:530009-530202:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:529768-529863:-1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041713000.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529779..529863,530009..530202,534416..534561,537057..537197,537962..538048,541131..541334,544911..545062))
location: region:529779-545062:-1
so has part: feature:544911-545062:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:530009-530202:-1:exon
so has part: feature:529779-529863:-1:exon

position:529779:-1
position: 529779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530009-530202:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:529779-529863:-1:exon

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X5
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEELCRAPPQLLRPRLSTCSGLSAQYLQPRAWPRPRSASDASSDVSIQMSQNYPPAIKYPQRGVPHPHLSTSPC
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529788..529863,530009..530202,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:529788-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:530009-530202:-1:exon
so has part: feature:529788-529863:-1:exon

XP_041568934.1
type: Protein
SIO_000068: ncbiprotein

position:529788:-1
position: 529788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530009-530202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529788-529863:-1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041713001.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529810..530202,533886..533959,534490..534561,537057..537197,537962..538048,541131..541334,544911..545063))
location: region:529810-545063:-1
so has part: feature:544911-545063:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534490-534561:-1:exon
so has part: feature:533886-533959:-1:exon
so has part: feature:529810-530202:-1:exon

position:529810:-1
position: 529810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534490-534561:-1:exon

position:534490:-1
position: 534490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:533886-533959:-1:exon

position:533886:-1
position: 533886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533959:-1
position: 533959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:529810-530202:-1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_041712998.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529810..530202,534416..534561,537057..537197,537962..538048,541131..541334,544911..545062))
location: region:529810-545062:-1
so has part: feature:544911-545062:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:529810-530202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529810-530202:-1:exon

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X6
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEELCRAPPQLLRPRLSTCSGLSAQYLQPRAWPRPRSASDASSDVSIQMSQNYPPAIKYPQRSVPHPHLSTSPC
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529933..530202,533886..533959,534490..534561,537057..537197,537962..538048,541131..541326))
location: region:529933-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534490-534561:-1:exon
so has part: feature:533886-533959:-1:exon
so has part: feature:529933-530202:-1:exon

XP_041568935.1
type: Protein
SIO_000068: ncbiprotein

position:529933:-1
position: 529933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534490-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:533886-533959:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529933-530202:-1:exon

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X4
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEELCRAPPQLLRPRLSTCSGLSAQYLQPRAWPRPRSASDASSDVSIQMSQNYPPAIKYPQRSVPHPHLSTSPC
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529933..530202,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:529933-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:529933-530202:-1:exon

XP_041568932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529933-530202:-1:exon

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X4
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEELCRAPPQLLRPRLSTCSGLSAQYLQPRAWPRPRSASDASSDVSIQMSQNYPPAIKYPQRSVPHPHLSTSPC
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(529933..530202,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:529933-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:529933-530202:-1:exon

XP_041568933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529933-530202:-1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_041713002.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(530811..530984,531074..531142,534416..534561,537057..537197,537962..538048,541131..541334,544911..545063))
location: region:530811-545063:-1
so has part: feature:544911-545063:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531074-531142:-1:exon
so has part: feature:530811-530984:-1:exon

position:530811:-1
position: 530811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531074-531142:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:530811-530984:-1:exon

position:530984:-1
position: 530984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_041713005.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(530822..530894,531054..531142,534416..534561,537057..537197,537962..538048,541131..541334,544911..545062))
location: region:530822-545062:-1
so has part: feature:544911-545062:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531054-531142:-1:exon
so has part: feature:530822-530894:-1:exon

position:530822:-1
position: 530822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531054-531142:-1:exon

position:531054:-1
position: 531054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:530822-530894:-1:exon

position:530894:-1
position: 530894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X7
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEEPCHTQGAGVMSVYLFTKRYAEEEPCHTQVSLRCAQVCHRCDTGVINPSLSVPGVTQV
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(530826..530984,531074..531142,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:530826-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531074-531142:-1:exon
so has part: feature:530826-530984:-1:exon

XP_041568936.1
type: Protein
SIO_000068: ncbiprotein

position:530826:-1
position: 530826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531074-531142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530826-530984:-1:exon

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X10
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEEPCHTQVYHRCDRCVTGVTRVSLTPLSLFQV
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(530837..530894,531054..531142,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:530837-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531054-531142:-1:exon
so has part: feature:530837-530894:-1:exon

XP_041568939.1
type: Protein
SIO_000068: ncbiprotein

position:530837:-1
position: 530837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531054-531142:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530837-530894:-1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_041712997.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(530863..530984,531074..531142,531414..531465,531579..531647,534416..534561,537057..537197,537962..538048,541131..541334,544911..545063))
location: region:530863-545063:-1
so has part: feature:544911-545063:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531579-531647:-1:exon
so has part: feature:531414-531465:-1:exon
so has part: feature:531074-531142:-1:exon
so has part: feature:530863-530984:-1:exon

position:530863:-1
position: 530863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531579-531647:-1:exon

position:531579:-1
position: 531579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531647:-1
position: 531647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:531414-531465:-1:exon

position:531414:-1
position: 531414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531465:-1
position: 531465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:531074-531142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:530863-530984:-1:exon

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X3
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYTKEEPCHTQVCHRCVTGVTNPSLSVPGRRCDVGVPVHQALRRGGAVSHTGRRCDVGVPVHQALRRGGAVSHTGVTQVCTGVSQV
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(530878..530984,531074..531142,531414..531465,531579..531647,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:530878-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531579-531647:-1:exon
so has part: feature:531414-531465:-1:exon
so has part: feature:531074-531142:-1:exon
so has part: feature:530878-530984:-1:exon

XP_041568931.1
type: Protein
SIO_000068: ncbiprotein

position:530878:-1
position: 530878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531579-531647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531414-531465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531074-531142:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:530878-530984:-1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_041713004.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(530883..530894,531054..531142,531414..531465,531579..531647,534416..534561,537057..537197,537962..538048,541131..541334,544911..545063))
location: region:530883-545063:-1
so has part: feature:544911-545063:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531579-531647:-1:exon
so has part: feature:531414-531465:-1:exon
so has part: feature:531054-531142:-1:exon
so has part: feature:530883-530894:-1:exon

position:530883:-1
position: 530883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531579-531647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531414-531465:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:531054-531142:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:530883-530894:-1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_041713006.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(530904..531142,534416..534561,537057..537197,537962..538048,541131..541334,544911..545062))
location: region:530904-545062:-1
so has part: feature:544911-545062:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:530904-531142:-1:exon

position:530904:-1
position: 530904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545062:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:530904-531142:-1:exon

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X11
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEEPCHTQVYHRCDRCTQVCTGVSQVSQV
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(531008..531142,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:531008-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531008-531142:-1:exon

XP_041568940.1
type: Protein
SIO_000068: ncbiprotein

position:531008:-1
position: 531008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531008-531142:-1:exon

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X9
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYTKEEPCHTQVCHRCVTGVTNPSLSVPGRRCDVGVPVHQALRRGGAVSHTGVSQV
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(531057..531142,531414..531465,531579..531647,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:531057-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531579-531647:-1:exon
so has part: feature:531414-531465:-1:exon
so has part: feature:531057-531142:-1:exon

XP_041568938.1
type: Protein
SIO_000068: ncbiprotein

position:531057:-1
position: 531057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531579-531647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531414-531465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531057-531142:-1:exon

CACNG7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CACNG7
product: calcium voltage-gated channel auxiliary subunit gamma 7, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041713003.1
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(531200..531330,531403..531465,531579..531647,534416..534561,537057..537197,537962..538048,541131..541334,544911..545063))
location: region:531200-545063:-1
so has part: feature:544911-545063:-1:exon
so has part: feature:541131-541334:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531579-531647:-1:exon
so has part: feature:531403-531465:-1:exon
so has part: feature:531200-531330:-1:exon

position:531200:-1
position: 531200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544911-545063:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541131-541334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531579-531647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531403-531465:-1:exon

position:531403:-1
position: 531403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:531200-531330:-1:exon

position:531330:-1
position: 531330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CACNG7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CACNG7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent calcium channel gamma-7 subunit isoform X8
translation: MSSCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGVVSPQNQSTEVRMALHAGLWRVCFFAGREKGRCVASEYFLEPELNLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNVGHIRPQRTLLAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPGGSEQYFQYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYTKEEPCHTQVCHRCVTGVTNPSLSVPGVSQVCHRCVTGVINPLLSLFQVCHRCH
SIO_010081: CACNG7
subclass of: SO_0000673
so part of: CACNG7
location: complement(join(531256..531330,531403..531465,531579..531647,534416..534561,537057..537197,537962..538048,541131..541326))
location: region:531256-541326:-1
so has part: feature:541131-541326:-1:exon
so has part: feature:537962-538048:-1:exon
so has part: feature:537057-537197:-1:exon
so has part: feature:534416-534561:-1:exon
so has part: feature:531579-531647:-1:exon
so has part: feature:531403-531465:-1:exon
so has part: feature:531256-531330:-1:exon

XP_041568937.1
type: Protein
SIO_000068: ncbiprotein

position:531256:-1
position: 531256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541131-541326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:537962-538048:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537057-537197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534416-534561:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531579-531647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:531403-531465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:531256-531330:-1:exon

PRKCG
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PRKCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(552337..593382)
location: region:552337-593382:-1
so has part: feature:552337-593382:-1:exon
subclass of: SO_0000010

121468842
type: Gene
SIO_000068: ncbigene

position:552337:-1
position: 552337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593382:-1
position: 593382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552337-593382:-1:exon

PRKCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRKCG
product: protein kinase C gamma
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041713007.1
SIO_010081: PRKCG
subclass of: SO_0000673
so part of: PRKCG
location: complement(join(552337..552556,553934..554075,555734..555841,556705..556785,557898..558036,558879..558941,561964..562055,563808..563981,568438..568584,569408..569437,570105..570192,571228..571362,577356..577512,579024..579155,583940..584051,589370..589452,591191..591222,593143..593382))
location: region:552337-593382:-1
so has part: feature:593143-593382:-1:exon
so has part: feature:591191-591222:-1:exon
so has part: feature:589370-589452:-1:exon
so has part: feature:583940-584051:-1:exon
so has part: feature:579024-579155:-1:exon
so has part: feature:577356-577512:-1:exon
so has part: feature:571228-571362:-1:exon
so has part: feature:570105-570192:-1:exon
so has part: feature:569408-569437:-1:exon
so has part: feature:568438-568584:-1:exon
so has part: feature:563808-563981:-1:exon
so has part: feature:561964-562055:-1:exon
so has part: feature:558879-558941:-1:exon
so has part: feature:557898-558036:-1:exon
so has part: feature:556705-556785:-1:exon
so has part: feature:555734-555841:-1:exon
so has part: feature:553934-554075:-1:exon
so has part: feature:552337-552556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593143-593382:-1:exon

position:593143:-1
position: 593143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591191-591222:-1:exon

position:591191:-1
position: 591191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591222:-1
position: 591222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:589370-589452:-1:exon

position:589370:-1
position: 589370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589452:-1
position: 589452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:583940-584051:-1:exon

position:583940:-1
position: 583940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584051:-1
position: 584051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579024-579155:-1:exon

position:579024:-1
position: 579024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579155:-1
position: 579155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:577356-577512:-1:exon

position:577356:-1
position: 577356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577512:-1
position: 577512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:571228-571362:-1:exon

position:571228:-1
position: 571228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571362:-1
position: 571362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:570105-570192:-1:exon

position:570105:-1
position: 570105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570192:-1
position: 570192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:569408-569437:-1:exon

position:569408:-1
position: 569408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:569437:-1
position: 569437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:568438-568584:-1:exon

position:568438:-1
position: 568438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568584:-1
position: 568584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:563808-563981:-1:exon

position:563808:-1
position: 563808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563981:-1
position: 563981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:561964-562055:-1:exon

position:561964:-1
position: 561964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562055:-1
position: 562055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:558879-558941:-1:exon

position:558879:-1
position: 558879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558941:-1
position: 558941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:557898-558036:-1:exon

position:557898:-1
position: 557898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558036:-1
position: 558036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:556705-556785:-1:exon

position:556705:-1
position: 556705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556785:-1
position: 556785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:555734-555841:-1:exon

position:555734:-1
position: 555734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555841:-1
position: 555841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:553934-554075:-1:exon

position:553934:-1
position: 553934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554075:-1
position: 554075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:552337-552556:-1:exon

position:552556:-1
position: 552556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRKCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRKCG
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein kinase C gamma type
translation: MALAEPERSAAGGVAGGVAGGVRPLFCRRGALRHKVVHEVKSHRFTARFFKQPTFCSHCTDFIWGIGKQGLQCMVCSFVVHKRCHEFVTFECPGAGKGPQTDDPRNKHKFRVHSYSSPTFCDHCGSLLYGLVHQGMKCSCCEMNVHKRCVQSVPSLCGVDHTERRGRLQIRIQALPGEQLHVTVGEARNLIPMDPNGLSDPYVKLKLIPDPKNVSKQKTRTVKATLNPVWNEAFLFSLRPGDAERRLSVEVWDWDRTSRNDFMGAMSFGVAELLKGRVDGWFKLLNQEEGEYYNVPVADTDDCGLRPKFEACNYPLELYEKVRRGPGPSPSPSPLPSPSEAKRSLPGSGRSQLGDFNFLMVLGKGSFGKVMLAERRDSAELFAIKILKKDVVVQDDDAASTMVERRVLALGPRPHFLTHLHSTFQTPDRLYFVMEYVTGGDLMYHIQQVGKFKEPHAAFYAAEIAIGLFFLHNRGIIYRDLKLDNVMLDAQGHVKITDFGMCKENIGPGGSTRTFCGTPDYIAPEIIAYQPYGKSVDWWSYGVLLYEMLAGQPPFDGEDEDELFQSILEQTVTYPKALSREAVAICKGFLTKHPGKRLGAGPGGEQEVRGHPFFRRTDWERLERLEVPPPFTPRPCGRNGENFDQFFTRAPPALTPPDALVLAGLDQAEFEGFSFTNPDFPQPPGSLV
SIO_010081: PRKCG
subclass of: SO_0000673
so part of: PRKCG
location: complement(join(552395..552556,553934..554075,555734..555841,556705..556785,557898..558036,558879..558941,561964..562055,563808..563981,568438..568584,569408..569437,570105..570192,571228..571362,577356..577512,579024..579155,583940..584051,589370..589452,591191..591222,593143..593333))
location: region:552395-593333:-1
so has part: feature:593143-593333:-1:exon
so has part: feature:591191-591222:-1:exon
so has part: feature:589370-589452:-1:exon
so has part: feature:583940-584051:-1:exon
so has part: feature:579024-579155:-1:exon
so has part: feature:577356-577512:-1:exon
so has part: feature:571228-571362:-1:exon
so has part: feature:570105-570192:-1:exon
so has part: feature:569408-569437:-1:exon
so has part: feature:568438-568584:-1:exon
so has part: feature:563808-563981:-1:exon
so has part: feature:561964-562055:-1:exon
so has part: feature:558879-558941:-1:exon
so has part: feature:557898-558036:-1:exon
so has part: feature:556705-556785:-1:exon
so has part: feature:555734-555841:-1:exon
so has part: feature:553934-554075:-1:exon
so has part: feature:552395-552556:-1:exon

XP_041568941.1
type: Protein
SIO_000068: ncbiprotein

position:552395:-1
position: 552395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593333:-1
position: 593333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593143-593333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591191-591222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589370-589452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583940-584051:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579024-579155:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577356-577512:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:571228-571362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:570105-570192:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569408-569437:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:568438-568584:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:563808-563981:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:561964-562055:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:558879-558941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:557898-558036:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:556705-556785:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:555734-555841:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:553934-554075:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:552395-552556:-1:exon

LOC121468843
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(573827..576312)
location: region:573827-576312:-1
so has part: feature:573827-576312:-1:exon
subclass of: SO_0000011

121468843
type: Gene
SIO_000068: ncbigene

position:573827:-1
position: 573827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576312:-1
position: 576312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573827-576312:-1:exon

LOC121468843
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468843
product: uncharacterized LOC121468843
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XR_005978628.1
SIO_010081: LOC121468843
subclass of: SO_0000673
so part of: LOC121468843
location: complement(join(573827..573943,576269..576312))
location: region:573827-576312:-1
so has part: feature:576269-576312:-1:exon
so has part: feature:573827-573943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:576269-576312:-1:exon

position:576269:-1
position: 576269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:573827-573943:-1:exon

position:573943:-1
position: 573943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468871
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(600603..614174)
location: region:600603-614174:-1
so has part: feature:600603-614174:-1:exon
subclass of: SO_0000010

121468871
type: Gene
SIO_000068: ncbigene

position:600603:-1
position: 600603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614174:-1
position: 614174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600603-614174:-1:exon

LOC121468871
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468871
product: reticulocalbin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_041713064.1
SIO_010081: LOC121468871
subclass of: SO_0000673
so part of: LOC121468871
location: complement(join(600603..600769,602497..602696,604118..604178,607459..607628,609146..609336,612892..613091,614086..614174))
location: region:600603-614174:-1
so has part: feature:614086-614174:-1:exon
so has part: feature:612892-613091:-1:exon
so has part: feature:609146-609336:-1:exon
so has part: feature:607459-607628:-1:exon
so has part: feature:604118-604178:-1:exon
so has part: feature:602497-602696:-1:exon
so has part: feature:600603-600769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614086-614174:-1:exon

position:614086:-1
position: 614086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612892-613091:-1:exon

position:612892:-1
position: 612892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613091:-1
position: 613091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:609146-609336:-1:exon

position:609146:-1
position: 609146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609336:-1
position: 609336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:607459-607628:-1:exon

position:607459:-1
position: 607459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607628:-1
position: 607628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:604118-604178:-1:exon

position:604118:-1
position: 604118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604178:-1
position: 604178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:602497-602696:-1:exon

position:602497:-1
position: 602497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602696:-1
position: 602696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:600603-600769:-1:exon

position:600769:-1
position: 600769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468871
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468871
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulocalbin-3-like
translation: MQLWPLWPLLALALGGSPHAPHPHFGAPPSHDHDPEGLFWDHAAIWGAQEAREQRELPPEESRRRLGLLVSRMDADGSGQVSREELRGWILRRHGGARQEALRDHRARLDRDRDGAVTWSEFARENFGESQDFGGSPDPDSHRKLLERSRRRFRAADEDGDGRLEAAELDAFLHPEDFPRLQDLVVQETIEDLDRDGDGFIQVDEYIADLFEGPPGSPEPPEILREREQFLRNRDRDGDARLGPDEVKFWLSPPSPDWAGVEAEHLIHHADLDQDGALTREEILGRWELFVGSRATDYGQDLHRAHDEL
SIO_010081: LOC121468871
subclass of: SO_0000673
so part of: LOC121468871
location: complement(join(600662..600769,602497..602696,604118..604178,607459..607628,609146..609336,612892..613091))
location: region:600662-613091:-1
so has part: feature:612892-613091:-1:exon
so has part: feature:609146-609336:-1:exon
so has part: feature:607459-607628:-1:exon
so has part: feature:604118-604178:-1:exon
so has part: feature:602497-602696:-1:exon
so has part: feature:600662-600769:-1:exon

XP_041568998.1
type: Protein
SIO_000068: ncbiprotein

position:600662:-1
position: 600662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612892-613091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:609146-609336:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607459-607628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604118-604178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602497-602696:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600662-600769:-1:exon

LOC121468872
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 614188..616352
location: region:614188-616352:1
so has part: feature:614188-616352:1:exon
subclass of: SO_0000011

121468872
type: Gene
SIO_000068: ncbigene

position:614188:1
position: 614188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616352:1
position: 616352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:614188-616352:1:exon

LOC121468872
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468872
product: uncharacterized LOC121468872
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005978639.1
SIO_010081: LOC121468872
subclass of: SO_0000673
so part of: LOC121468872
location: join(614188..614273,615046..615157,616299..616352)
location: region:614188-616352:1
so has part: feature:614188-614273:1:exon
so has part: feature:615046-615157:1:exon
so has part: feature:616299-616352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:614188-614273:1:exon

position:614273:1
position: 614273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:615046-615157:1:exon

position:615046:1
position: 615046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615157:1
position: 615157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:616299-616352:1:exon

position:616299:1
position: 616299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468860
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(619465..623923)
location: region:619465-623923:-1
so has part: feature:619465-623923:-1:exon
subclass of: SO_0000010

121468860
type: Gene
SIO_000068: ncbigene

position:619465:-1
position: 619465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623923:-1
position: 623923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619465-623923:-1:exon

LOC121468860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LOC121468860
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_041713040.1
SIO_010081: LOC121468860
subclass of: SO_0000673
so part of: LOC121468860
location: complement(join(619465..620794,623800..623923))
location: region:619465-623923:-1
so has part: feature:623800-623923:-1:exon
so has part: feature:619465-620794:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623800-623923:-1:exon

position:623800:-1
position: 623800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619465-620794:-1:exon

position:620794:-1
position: 620794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LOC121468860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nascent polypeptide-associated complex subunit alpha, muscle-specific form-like
translation: MGGAASARLRLRQLPGAALRMRGCGVQTRVLPPSGAEDRGWEGEGTPRAASPNRDRTPPATPKMGRDREGGVPRGSPRCGGEVVACSVAPRVAIGGVSPGAVAIGGVSLRDVAIGGVSPDAATTPSVSPESGNPRVGTLAVSPSRVATSRMSPNRIATSRVSPNPIVTSRVSPNPIATPKMSPNPVATPKMSPNPVVTPRVSPNPVATSRVSPTPVVTSRMSPNPVVTSRMSPNPVATSRMSPNLIVTPRVSPNPVVTSRMSPNPVVTLRTSPDPVATPRVGTLGVSPSPVATCRTSPNPVVTPKMSPNPVATSRTSPNPIATPRVSPAPVVTPRVSPNPIATSPPPPRPERCTLL
SIO_010081: LOC121468860
subclass of: SO_0000673
so part of: LOC121468860
location: complement(619634..620704)
location: region:619634-620704:-1
so has part: feature:619634-620704:-1:exon

XP_041568974.1
type: Protein
SIO_000068: ncbiprotein

position:619634:-1
position: 619634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620704:-1
position: 620704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619634-620704:-1:exon

NDUFA3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: NDUFA3
note: NADH-ubiquinone oxidoreductase B9 subunit-like; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: <624444..628064
location: region:624444-628064:1
so has part: feature:624444-628064:1:exon
subclass of: SO_0000010

100190335
type: Gene
SIO_000068: ncbigene

position:624444:1
position: 624444
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:628064:1
position: 628064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624444-628064:1:exon

NDUFA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: NDUFA3
product: NADH:ubiquinone oxidoreductase subunit A3
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001245482.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 3 substitutions and aligns at 92% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001245482.1
SIO_010081: NDUFA3
subclass of: SO_0000673
so part of: NDUFA3
location: join(<624444..624468,625529..625603,625688..625765,627845..628064)
location: region:624444-628064:1
so has part: feature:624444-624468:1:exon
so has part: feature:625529-625603:1:exon
so has part: feature:625688-625765:1:exon
so has part: feature:627845-628064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624444-624468:1:exon

position:624468:1
position: 624468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625529-625603:1:exon

position:625529:1
position: 625529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625603:1
position: 625603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:625688-625765:1:exon

position:625688:1
position: 625688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625765:1
position: 625765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:627845-628064:1:exon

position:627845:1
position: 627845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDUFA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: NDUFA3
inference: similar to AA sequence (same species):RefSeq:NP_001232411.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: putative NADH-ubiquinone oxidoreductase B9 subunit
translation: MAGRLAAALRSLWAKEPVIAASFGIAALALVSPLLSPFTKYSGMINQATPYTYPVPVRDDGRHPEVSPHPCAPQGPGLAWLRQL
SIO_010081: NDUFA3
subclass of: SO_0000673
so part of: NDUFA3
location: join(624459..624468,625529..625603,625688..625765,627845..627936)
location: region:624459-627936:1
so has part: feature:624459-624468:1:exon
so has part: feature:625529-625603:1:exon
so has part: feature:625688-625765:1:exon
so has part: feature:627845-627936:1:exon

NP_001232411.1
type: Protein
SIO_000068: ncbiprotein

position:624459:1
position: 624459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627936:1
position: 627936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624459-624468:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625529-625603:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:625688-625765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627845-627936:1:exon

TFPT
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TFPT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(629274..641142)
location: region:629274-641142:-1
so has part: feature:629274-641142:-1:exon
subclass of: SO_0000010

121468867
type: Gene
SIO_000068: ncbigene

position:629274:-1
position: 629274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641142:-1
position: 641142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629274-641142:-1:exon

TFPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TFPT
product: TCF3 fusion partner, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041713059.1
SIO_010081: TFPT
subclass of: SO_0000673
so part of: TFPT
location: complement(join(629274..629437,633276..633345,634232..634302,635841..636145,641039..641142))
location: region:629274-641142:-1
so has part: feature:641039-641142:-1:exon
so has part: feature:635841-636145:-1:exon
so has part: feature:634232-634302:-1:exon
so has part: feature:633276-633345:-1:exon
so has part: feature:629274-629437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641039-641142:-1:exon

position:641039:-1
position: 641039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:635841-636145:-1:exon

position:635841:-1
position: 635841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636145:-1
position: 636145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634232-634302:-1:exon

position:634232:-1
position: 634232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:634302:-1
position: 634302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633276-633345:-1:exon

position:633276:-1
position: 633276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:633345:-1
position: 633345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:629274-629437:-1:exon

position:629437:-1
position: 629437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TFPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TFPT
product: TCF3 fusion partner, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_041713057.1
SIO_010081: TFPT
subclass of: SO_0000673
so part of: TFPT
location: complement(join(629274..629437,630966..631202,633276..633345,634232..634302,635841..636145,641039..641142))
location: region:629274-641142:-1
so has part: feature:641039-641142:-1:exon
so has part: feature:635841-636145:-1:exon
so has part: feature:634232-634302:-1:exon
so has part: feature:633276-633345:-1:exon
so has part: feature:630966-631202:-1:exon
so has part: feature:629274-629437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:641039-641142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635841-636145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634232-634302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633276-633345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:630966-631202:-1:exon

position:630966:-1
position: 630966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631202:-1
position: 631202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:629274-629437:-1:exon

TFPT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TFPT
product: TCF3 fusion partner, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_041713058.1
SIO_010081: TFPT
subclass of: SO_0000673
so part of: TFPT
location: complement(join(629274..629437,630966..631202,633276..633345,634232..634302,635841..636145,636255..636280))
location: region:629274-636280:-1
so has part: feature:636255-636280:-1:exon
so has part: feature:635841-636145:-1:exon
so has part: feature:634232-634302:-1:exon
so has part: feature:633276-633345:-1:exon
so has part: feature:630966-631202:-1:exon
so has part: feature:629274-629437:-1:exon

position:636280:-1
position: 636280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636255-636280:-1:exon

position:636255:-1
position: 636255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:635841-636145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634232-634302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:633276-633345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:630966-631202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:629274-629437:-1:exon

TFPT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TFPT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner isoform X2
translation: MAGVSFEEFSAPPGAELALEPLFGGNILESEGEPEAGPEGGGAAQAPPLPPTPRPLRGGRGQERGGEGPGGEGQGGEDSPELRRRRMKLQALGRRCREIRQVNARALQRLRQVQRETRRMRLERRFLMQVLDAHGDRYRQGQLTLLLQLGPSPPWGPPSPPERPPRVPKFSDFD
SIO_010081: TFPT
subclass of: SO_0000673
so part of: TFPT
location: complement(join(629357..629437,633276..633345,634232..634302,635841..636143))
location: region:629357-636143:-1
so has part: feature:635841-636143:-1:exon
so has part: feature:634232-634302:-1:exon
so has part: feature:633276-633345:-1:exon
so has part: feature:629357-629437:-1:exon

XP_041568993.1
type: Protein
SIO_000068: ncbiprotein

position:629357:-1
position: 629357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636143:-1
position: 636143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635841-636143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634232-634302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633276-633345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:629357-629437:-1:exon

TFPT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TFPT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner isoform X1
translation: MAGVSFEEFSAPPGAELALEPLFGGNILESEGEPEAGPEGGGAAQAPPLPPTPRPLRGGRGQERGGEGPGGEGQGGEDSPELRRRRMKLQALGRRCREIRQVNARALQRLRQVQRETRRMRLERRFLMQVLDAHGDRYRQGQLTLLLQDEGGPSGGVAAAPPPPGNAENEPPGGGPPAPPPPPPKTPPEPPGPKRRRRDPRGGRRGGPQNPPRPQRAPQNPPGGGTQLGPSPPWGPPSPPERPPRVPKFSDFD
SIO_010081: TFPT
subclass of: SO_0000673
so part of: TFPT
location: complement(join(629357..629437,630966..631202,633276..633345,634232..634302,635841..636143))
location: region:629357-636143:-1
so has part: feature:635841-636143:-1:exon
so has part: feature:634232-634302:-1:exon
so has part: feature:633276-633345:-1:exon
so has part: feature:630966-631202:-1:exon
so has part: feature:629357-629437:-1:exon

XP_041568991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:635841-636143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634232-634302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633276-633345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630966-631202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:629357-629437:-1:exon

TFPT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TFPT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TCF3 fusion partner isoform X1
translation: MAGVSFEEFSAPPGAELALEPLFGGNILESEGEPEAGPEGGGAAQAPPLPPTPRPLRGGRGQERGGEGPGGEGQGGEDSPELRRRRMKLQALGRRCREIRQVNARALQRLRQVQRETRRMRLERRFLMQVLDAHGDRYRQGQLTLLLQDEGGPSGGVAAAPPPPGNAENEPPGGGPPAPPPPPPKTPPEPPGPKRRRRDPRGGRRGGPQNPPRPQRAPQNPPGGGTQLGPSPPWGPPSPPERPPRVPKFSDFD
SIO_010081: TFPT
subclass of: SO_0000673
so part of: TFPT
location: complement(join(629357..629437,630966..631202,633276..633345,634232..634302,635841..636143))
location: region:629357-636143:-1
so has part: feature:635841-636143:-1:exon
so has part: feature:634232-634302:-1:exon
so has part: feature:633276-633345:-1:exon
so has part: feature:630966-631202:-1:exon
so has part: feature:629357-629437:-1:exon

XP_041568992.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:635841-636143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634232-634302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:633276-633345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:630966-631202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:629357-629437:-1:exon

PRPF31
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: PRPF31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 642710..671394
location: region:642710-671394:1
so has part: feature:642710-671394:1:exon
subclass of: SO_0000010

121468856
type: Gene
SIO_000068: ncbigene

position:642710:1
position: 642710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671394:1
position: 671394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642710-671394:1:exon

PRPF31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRPF31
product: pre-mRNA processing factor 31, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_041713034.1
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642710..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,658600..658689,660770..660897,661523..661595,669543..669671,669740..669838,671064..671394)
location: region:642710-671394:1
so has part: feature:642710-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:669543-669671:1:exon
so has part: feature:669740-669838:1:exon
so has part: feature:671064-671394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642710-642932:1:exon

position:642932:1
position: 642932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

position:645400:1
position: 645400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645460:1
position: 645460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

position:646713:1
position: 646713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646796:1
position: 646796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

position:647516:1
position: 647516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647613:1
position: 647613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

position:649590:1
position: 649590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649696:1
position: 649696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651863:1:exon

position:651694:1
position: 651694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651863:1
position: 651863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:658600-658689:1:exon

position:658600:1
position: 658600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658689:1
position: 658689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:660770-660897:1:exon

position:660770:1
position: 660770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660897:1
position: 660897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:661523-661595:1:exon

position:661523:1
position: 661523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661595:1
position: 661595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:669543-669671:1:exon

position:669543:1
position: 669543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669671:1
position: 669671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:669740-669838:1:exon

position:669740:1
position: 669740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669838:1
position: 669838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:671064-671394:1:exon

position:671064:1
position: 671064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRPF31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRPF31
product: pre-mRNA processing factor 31, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041713031.1
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642710..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,655181..655338,658600..658689,660770..660897,661523..661595,669543..669671,669740..669838,671064..671197)
location: region:642710-671197:1
so has part: feature:642710-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:669543-669671:1:exon
so has part: feature:669740-669838:1:exon
so has part: feature:671064-671197:1:exon

position:671197:1
position: 671197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642710-642932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:655181-655338:1:exon

position:655181:1
position: 655181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:655338:1
position: 655338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669543-669671:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:669740-669838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671064-671197:1:exon

PRPF31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRPF31
product: pre-mRNA processing factor 31, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_041713033.1
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642710..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651801,651979..652040,655181..655338,658600..658689,660770..660897,661523..661595,669543..669671,669740..669838,671064..671197)
location: region:642710-671197:1
so has part: feature:642710-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651801:1:exon
so has part: feature:651979-652040:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:669543-669671:1:exon
so has part: feature:669740-669838:1:exon
so has part: feature:671064-671197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642710-642932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651801:1:exon

position:651801:1
position: 651801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:651979-652040:1:exon

position:651979:1
position: 651979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652040:1
position: 652040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:655181-655338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:669543-669671:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:669740-669838:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671064-671197:1:exon

PRPF31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRPF31
product: pre-mRNA processing factor 31, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041713032.1
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642710..642889,643973..644015,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,655181..655338,658600..658689,660770..660897,661523..661595,669543..669671,669740..669838,671064..671197)
location: region:642710-671197:1
so has part: feature:642710-642889:1:exon
so has part: feature:643973-644015:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:669543-669671:1:exon
so has part: feature:669740-669838:1:exon
so has part: feature:671064-671197:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642710-642889:1:exon

position:642889:1
position: 642889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643973-644015:1:exon

position:643973:1
position: 643973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644015:1
position: 644015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651694-651863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655181-655338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:669543-669671:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:669740-669838:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671064-671197:1:exon

PRPF31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRPF31
product: pre-mRNA processing factor 31, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_041713035.1
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642710..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,655181..655338,658600..658689,660770..660897,661523..661595,666707..666804)
location: region:642710-666804:1
so has part: feature:642710-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:666707-666804:1:exon

position:666804:1
position: 666804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642710-642932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:655181-655338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666707-666804:1:exon

position:666707:1
position: 666707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRPF31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: PRPF31
product: pre-mRNA processing factor 31, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_041713036.1
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642710..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,655181..655338,658600..658689,660770..660897,661523..661595,663413..663494)
location: region:642710-663494:1
so has part: feature:642710-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:663413-663494:1:exon

position:663494:1
position: 663494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642710-642932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:655181-655338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:663413-663494:1:exon

position:663413:1
position: 663413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRPF31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRPF31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X4
translation: MSLADELLADLEEAAGEEEEEEAEGSEGGEGPIEEVREEPEAPEGGESVRSIAKLWGSRGFAEIMQKIEEYIGKQPRAAEVLGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENVQQILTNATIMVVSVTASTTQGQQLSEEELGRIEDACDMALALSGAKLRIYEYVESRMSFIAPNLSLILGASTAAKIMGPAQKSRSAGGRQVHVGSAGGQFPREPGRKGWLRAEGGDRAQVRQVAGAAPGQAGEAAAGAAGRAEEEEGGPALPEDEGAPGADGDSQAGQQDELWGDRGGRLPGGPGLQPGPPGQGGQRPRAPDSGQRGHQGSDQQNPAEDAAEAERGVRRQIHHPRPQLGDGLQRGLHPPAGSGDREPAGGREESGRGQPEIFLQHGRVPQGQGRKKWGPHPPLNPKIPKIFPKSSWEPQNSLGTPKSPTPNSLLPFLSIII
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642753..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,658600..658689,660770..660897,661523..661595,669543..669671,669740..669838,671064..671308)
location: region:642753-671308:1
so has part: feature:642753-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:669543-669671:1:exon
so has part: feature:669740-669838:1:exon
so has part: feature:671064-671308:1:exon

XP_041568968.1
type: Protein
SIO_000068: ncbiprotein

position:642753:1
position: 642753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671308:1
position: 671308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642753-642932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:669543-669671:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669740-669838:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671064-671308:1:exon

PRPF31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRPF31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1
translation: MSLADELLADLEEAAGEEEEEEAEGSEGGEGPIEEVREEPEAPEGGESVRSIAKLWGSRGFAEIMQKIEEYIGKQPRAAEVLGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENVQQILTNATIMVVSVTASTTQGQQLSEEELGRIEDACDMALALSGAKLRIYEYVESRMSFIAPNLSLILGASTAAKIMGVAGGLTPLSKLPACNILLLGAQRRTLSGFSSTSVLPHTGFIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESQDGKVGYELKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKAGSGRVRQTQVNEATKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFSSMAEFLKVKGEKSGVPTPP
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642753..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,655181..655338,658600..658689,660770..660897,661523..661595,669543..669671,669740..669838,671064..671192)
location: region:642753-671192:1
so has part: feature:642753-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:669543-669671:1:exon
so has part: feature:669740-669838:1:exon
so has part: feature:671064-671192:1:exon

XP_041568965.1
type: Protein
SIO_000068: ncbiprotein

position:671192:1
position: 671192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642753-642932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:655181-655338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669543-669671:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:669740-669838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671064-671192:1:exon

PRPF31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRPF31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X3
translation: MSLADELLADLEEAAGEEEEEEAEGSEGGEGPIEEVREEPEAPEGGESVRSIAKLWGSRGFAEIMQKIEEYIGKQPRAAEVLGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENVQQILTNATIMVVSVTASTTQGQQLSEEELGRIEDACDMALALSGAKLRIYEYVESRMSFIAPNLSLILGASTAAKIMGVAGGLTPLSKLPACNILLLGAQRRTLSGFSSTSVLPHTGFIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESQDGKVGYELKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKAGSGRVRQTQVNEATKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFSSMAEFLKVKGEKSGVPTPP
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642753..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651801,651979..652040,655181..655338,658600..658689,660770..660897,661523..661595,669543..669671,669740..669838,671064..671192)
location: region:642753-671192:1
so has part: feature:642753-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651801:1:exon
so has part: feature:651979-652040:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:669543-669671:1:exon
so has part: feature:669740-669838:1:exon
so has part: feature:671064-671192:1:exon

XP_041568967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:642753-642932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651801:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651979-652040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655181-655338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:669543-669671:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:669740-669838:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671064-671192:1:exon

PRPF31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRPF31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2
translation: MSLADELLADLEEAAGEEEEEEAEGSEGGEGPIEEVREEPEAPEGGESVRSIAKLWGSRGFAEIMQKIEEYIGKQPRAAEVLGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENVQQILTNATIMVVSVTASTTQGQQLSEEELGRIEDACDMALALSGAKLRIYEYVESRMSFIAPNLSLILGASTAAKIMGVAGGLTPLSKLPACNILLLGAQRRTLSGFSSTSVLPHTGFIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESQDGKVGYELKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKAGSGRVRQTQVNEATKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFSSMAEFLKVKGEKSGVPTPP
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642753..642889,643973..644015,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,655181..655338,658600..658689,660770..660897,661523..661595,669543..669671,669740..669838,671064..671192)
location: region:642753-671192:1
so has part: feature:642753-642889:1:exon
so has part: feature:643973-644015:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:669543-669671:1:exon
so has part: feature:669740-669838:1:exon
so has part: feature:671064-671192:1:exon

XP_041568966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:642753-642889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643973-644015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:651694-651863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:655181-655338:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:669543-669671:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:669740-669838:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671064-671192:1:exon

PRPF31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRPF31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X5
translation: MSLADELLADLEEAAGEEEEEEAEGSEGGEGPIEEVREEPEAPEGGESVRSIAKLWGSRGFAEIMQKIEEYIGKQPRAAEVLGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENVQQILTNATIMVVSVTASTTQGQQLSEEELGRIEDACDMALALSGAKLRIYEYVESRMSFIAPNLSLILGASTAAKIMGVAGGLTPLSKLPACNILLLGAQRRTLSGFSSTSVLPHTGFIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESQDGKVGYELKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGPPNPILTPF
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642753..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,655181..655338,658600..658689,660770..660897,661523..661595,666707..666790)
location: region:642753-666790:1
so has part: feature:642753-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:666707-666790:1:exon

XP_041568969.1
type: Protein
SIO_000068: ncbiprotein

position:666790:1
position: 666790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642753-642932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:655181-655338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666707-666790:1:exon

PRPF31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: PRPF31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X6
translation: MSLADELLADLEEAAGEEEEEEAEGSEGGEGPIEEVREEPEAPEGGESVRSIAKLWGSRGFAEIMQKIEEYIGKQPRAAEVLGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENVQQILTNATIMVVSVTASTTQGQQLSEEELGRIEDACDMALALSGAKLRIYEYVESRMSFIAPNLSLILGASTAAKIMGVAGGLTPLSKLPACNILLLGAQRRTLSGFSSTSVLPHTGFIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESQDGKVGYELKEEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGPPNPILTPF
SIO_010081: PRPF31
subclass of: SO_0000673
so part of: PRPF31
location: join(642753..642932,645400..645460,646713..646796,647516..647613,649590..649696,651694..651863,655181..655338,658600..658689,660770..660897,661523..661595,663413..663487)
location: region:642753-663487:1
so has part: feature:642753-642932:1:exon
so has part: feature:645400-645460:1:exon
so has part: feature:646713-646796:1:exon
so has part: feature:647516-647613:1:exon
so has part: feature:649590-649696:1:exon
so has part: feature:651694-651863:1:exon
so has part: feature:655181-655338:1:exon
so has part: feature:658600-658689:1:exon
so has part: feature:660770-660897:1:exon
so has part: feature:661523-661595:1:exon
so has part: feature:663413-663487:1:exon

XP_041568970.1
type: Protein
SIO_000068: ncbiprotein

position:663487:1
position: 663487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642753-642932:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645400-645460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646713-646796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647516-647613:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:649590-649696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:651694-651863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:655181-655338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:658600-658689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:660770-660897:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661523-661595:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:663413-663487:1:exon

LOC121468857
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 660317..660638
location: region:660317-660638:1
so has part: feature:660317-660638:1:exon
subclass of: SO_0000011

121468857
type: Gene
SIO_000068: ncbigene

position:660317:1
position: 660317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660638:1
position: 660638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660317-660638:1:exon

LOC121468857
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468857
product: uncharacterized LOC121468857
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XR_005978637.1
SIO_010081: LOC121468857
subclass of: SO_0000673
so part of: LOC121468857
location: join(660317..660359,660582..660638)
location: region:660317-660638:1
so has part: feature:660317-660359:1:exon
so has part: feature:660582-660638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660317-660359:1:exon

position:660359:1
position: 660359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660582-660638:1:exon

position:660582:1
position: 660582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNOT3
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CNOT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 674724..720302
location: region:674724-720302:1
so has part: feature:674724-720302:1:exon
subclass of: SO_0000010

121468846
type: Gene
SIO_000068: ncbigene

position:674724:1
position: 674724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720302:1
position: 720302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674724-720302:1:exon

CNOT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CNOT3
product: CCR4-NOT transcription complex subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_041713011.1
SIO_010081: CNOT3
subclass of: SO_0000673
so part of: CNOT3
location: join(674724..674910,677160..677218,678127..678194,679857..679931,681444..681533,685195..685323,686527..686622,689162..689381,691271..691401,695268..695324,697817..698150,699595..699703,703013..703202,704371..704467,708742..708964,712711..712843,717656..717781,720104..720302)
location: region:674724-720302:1
so has part: feature:674724-674910:1:exon
so has part: feature:677160-677218:1:exon
so has part: feature:678127-678194:1:exon
so has part: feature:679857-679931:1:exon
so has part: feature:681444-681533:1:exon
so has part: feature:685195-685323:1:exon
so has part: feature:686527-686622:1:exon
so has part: feature:689162-689381:1:exon
so has part: feature:691271-691401:1:exon
so has part: feature:695268-695324:1:exon
so has part: feature:697817-698150:1:exon
so has part: feature:699595-699703:1:exon
so has part: feature:703013-703202:1:exon
so has part: feature:704371-704467:1:exon
so has part: feature:708742-708964:1:exon
so has part: feature:712711-712843:1:exon
so has part: feature:717656-717781:1:exon
so has part: feature:720104-720302:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:674724-674910:1:exon

position:674910:1
position: 674910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:677160-677218:1:exon

position:677160:1
position: 677160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677218:1
position: 677218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:678127-678194:1:exon

position:678127:1
position: 678127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678194:1
position: 678194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:679857-679931:1:exon

position:679857:1
position: 679857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679931:1
position: 679931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:681444-681533:1:exon

position:681444:1
position: 681444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681533:1
position: 681533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:685195-685323:1:exon

position:685195:1
position: 685195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685323:1
position: 685323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:686527-686622:1:exon

position:686527:1
position: 686527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686622:1
position: 686622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:689162-689381:1:exon

position:689162:1
position: 689162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689381:1
position: 689381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:691271-691401:1:exon

position:691271:1
position: 691271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691401:1
position: 691401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:695268-695324:1:exon

position:695268:1
position: 695268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:695324:1
position: 695324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:697817-698150:1:exon

position:697817:1
position: 697817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698150:1
position: 698150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:699595-699703:1:exon

position:699595:1
position: 699595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:699703:1
position: 699703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:703013-703202:1:exon

position:703013:1
position: 703013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703202:1
position: 703202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:704371-704467:1:exon

position:704371:1
position: 704371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704467:1
position: 704467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:708742-708964:1:exon

position:708742:1
position: 708742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708964:1
position: 708964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:712711-712843:1:exon

position:712711:1
position: 712711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712843:1
position: 712843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:717656-717781:1:exon

position:717656:1
position: 717656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717781:1
position: 717781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:720104-720302:1:exon

position:720104:1
position: 720104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNOT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CNOT3
product: CCR4-NOT transcription complex subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_041713012.1
SIO_010081: CNOT3
subclass of: SO_0000673
so part of: CNOT3
location: join(674724..674910,677160..677218,678127..678194,679857..679931,681444..681533,685195..685323,686527..686622,689162..689381,691271..691401,695268..695324,697817..698150,699595..699703,703013..703199,704371..704467,708742..708964,712711..712843,717656..717781,720104..720301)
location: region:674724-720301:1
so has part: feature:674724-674910:1:exon
so has part: feature:677160-677218:1:exon
so has part: feature:678127-678194:1:exon
so has part: feature:679857-679931:1:exon
so has part: feature:681444-681533:1:exon
so has part: feature:685195-685323:1:exon
so has part: feature:686527-686622:1:exon
so has part: feature:689162-689381:1:exon
so has part: feature:691271-691401:1:exon
so has part: feature:695268-695324:1:exon
so has part: feature:697817-698150:1:exon
so has part: feature:699595-699703:1:exon
so has part: feature:703013-703199:1:exon
so has part: feature:704371-704467:1:exon
so has part: feature:708742-708964:1:exon
so has part: feature:712711-712843:1:exon
so has part: feature:717656-717781:1:exon
so has part: feature:720104-720301:1:exon

position:720301:1
position: 720301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674724-674910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677160-677218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678127-678194:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:679857-679931:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:681444-681533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:685195-685323:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:686527-686622:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:689162-689381:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:691271-691401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:695268-695324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:697817-698150:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:699595-699703:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:703013-703199:1:exon

position:703199:1
position: 703199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:704371-704467:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:708742-708964:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:712711-712843:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:717656-717781:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:720104-720301:1:exon

CNOT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CNOT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCR4-NOT transcription complex subunit 3 isoform X1
translation: MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEALKRQVERHRFHVRMLETLLRMLDNDSIPVDPVRKLKDDVEYYVDSCQEPDFEENEFLYDDLDLDDIPQALVATSPPSHSQMEDEIFNQSSSTPTSTTSSSPIPPSPAANAENSEDDKKRGRSTDSEVGQSPAKNGAKPLPHGHAPSPAGPAPFSGPAPGPAPLNNGPSPSGAGPGGGAQSAQGAGPGPKGGGERGGAHPPSSTPTPYAQAVAPPPAPPPSAPQPRPPSAQQGGKQNGGATSYSSVVADSSSESGLGGGGPQTPLGQPPGHGTPGTATKEPGPGPAPAAGGGGASLLGPAHGANPAPSPSPPFPEPKGGAAQAPPLLNGPAPFGPAPEIKVPEPLSSLKSMAERAAMGAGLEEAGPPLHLGERELLLGPGAAPPSSGVPGGVPGGVPGGSLGEVSIPLSLGVCPLGPLPLPKEQLYQQALQEPAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQLPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
SIO_010081: CNOT3
subclass of: SO_0000673
so part of: CNOT3
location: join(677194..677218,678127..678194,679857..679931,681444..681533,685195..685323,686527..686622,689162..689381,691271..691401,695268..695324,697817..698150,699595..699703,703013..703202,704371..704467,708742..708964,712711..712843,717656..717781,720104..720202)
location: region:677194-720202:1
so has part: feature:677194-677218:1:exon
so has part: feature:678127-678194:1:exon
so has part: feature:679857-679931:1:exon
so has part: feature:681444-681533:1:exon
so has part: feature:685195-685323:1:exon
so has part: feature:686527-686622:1:exon
so has part: feature:689162-689381:1:exon
so has part: feature:691271-691401:1:exon
so has part: feature:695268-695324:1:exon
so has part: feature:697817-698150:1:exon
so has part: feature:699595-699703:1:exon
so has part: feature:703013-703202:1:exon
so has part: feature:704371-704467:1:exon
so has part: feature:708742-708964:1:exon
so has part: feature:712711-712843:1:exon
so has part: feature:717656-717781:1:exon
so has part: feature:720104-720202:1:exon

XP_041568945.1
type: Protein
SIO_000068: ncbiprotein

position:677194:1
position: 677194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720202:1
position: 720202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677194-677218:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678127-678194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:679857-679931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681444-681533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685195-685323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686527-686622:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689162-689381:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691271-691401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:695268-695324:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:697817-698150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:699595-699703:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:703013-703202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:704371-704467:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:708742-708964:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:712711-712843:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:717656-717781:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:720104-720202:1:exon

CNOT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: CNOT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCR4-NOT transcription complex subunit 3 isoform X2
translation: MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRDQIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKEKEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEALKRQVERHRFHVRMLETLLRMLDNDSIPVDPVRKLKDDVEYYVDSCQEPDFEENEFLYDDLDLDDIPQALVATSPPSHSQMEDEIFNQSSSTPTSTTSSSPIPPSPAANAENSEDDKKRGRSTDSEVGQSPAKNGAKPLPHGHAPSPAGPAPFSGPAPGPAPLNNGPSPSGAGPGGGAQSAQGAGPGPKGGGERGGAHPPSSTPTPYAQAVAPPPAPPPSAPQPRPPSAQQGGKQNGGATSYSSVVADSSSESGLGGGGPQTPLGQPPGHGTPGTATKEPGPGPAPAAGGGGASLLGPAHGANPAPSPSPPFPEPKGGAAQAPPLLNGPAPFGPAPEIKPEPLSSLKSMAERAAMGAGLEEAGPPLHLGERELLLGPGAAPPSSGVPGGVPGGVPGGSLGEVSIPLSLGVCPLGPLPLPKEQLYQQALQEPAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQLPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
SIO_010081: CNOT3
subclass of: SO_0000673
so part of: CNOT3
location: join(677194..677218,678127..678194,679857..679931,681444..681533,685195..685323,686527..686622,689162..689381,691271..691401,695268..695324,697817..698150,699595..699703,703013..703199,704371..704467,708742..708964,712711..712843,717656..717781,720104..720202)
location: region:677194-720202:1
so has part: feature:677194-677218:1:exon
so has part: feature:678127-678194:1:exon
so has part: feature:679857-679931:1:exon
so has part: feature:681444-681533:1:exon
so has part: feature:685195-685323:1:exon
so has part: feature:686527-686622:1:exon
so has part: feature:689162-689381:1:exon
so has part: feature:691271-691401:1:exon
so has part: feature:695268-695324:1:exon
so has part: feature:697817-698150:1:exon
so has part: feature:699595-699703:1:exon
so has part: feature:703013-703199:1:exon
so has part: feature:704371-704467:1:exon
so has part: feature:708742-708964:1:exon
so has part: feature:712711-712843:1:exon
so has part: feature:717656-717781:1:exon
so has part: feature:720104-720202:1:exon

XP_041568946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:677194-677218:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678127-678194:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:679857-679931:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:681444-681533:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685195-685323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:686527-686622:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:689162-689381:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:691271-691401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:695268-695324:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:697817-698150:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:699595-699703:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:703013-703199:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:704371-704467:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:708742-708964:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:712711-712843:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:717656-717781:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:720104-720202:1:exon

LOC121468838
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468838
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 721519..722256
location: region:721519-722256:1
so has part: feature:721519-722256:1:exon
subclass of: SO_0000011

121468838
type: Gene
SIO_000068: ncbigene

position:721519:1
position: 721519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722256:1
position: 722256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721519-722256:1:exon

LOC121468838
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468838
product: uncharacterized LOC121468838
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_005978600.1
SIO_010081: LOC121468838
subclass of: SO_0000673
so part of: LOC121468838
location: join(721519..722068,722195..722256)
location: region:721519-722256:1
so has part: feature:721519-722068:1:exon
so has part: feature:722195-722256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:721519-722068:1:exon

position:722068:1
position: 722068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:722195-722256:1:exon

position:722195:1
position: 722195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC121468837
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468837
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(721944..722828)
location: region:721944-722828:-1
so has part: feature:721944-722828:-1:exon
subclass of: SO_0000011

121468837
type: Gene
SIO_000068: ncbigene

position:721944:-1
position: 721944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722828:-1
position: 722828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721944-722828:-1:exon

LOC121468837
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468837
product: uncharacterized LOC121468837
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005978598.1
SIO_010081: LOC121468837
subclass of: SO_0000673
so part of: LOC121468837
location: complement(join(721944..721982,722211..722828))
location: region:721944-722828:-1
so has part: feature:722211-722828:-1:exon
so has part: feature:721944-721982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722211-722828:-1:exon

position:722211:-1
position: 722211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721944-721982:-1:exon

position:721982:-1
position: 721982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC121468836
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LOC121468836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 722842..723899
location: region:722842-723899:1
so has part: feature:722842-723899:1:exon
subclass of: SO_0000011

121468836
type: Gene
SIO_000068: ncbigene

position:722842:1
position: 722842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723899:1
position: 723899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722842-723899:1:exon

LOC121468836
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 59729
nc RNA class: lncRNA
gene: LOC121468836
product: uncharacterized LOC121468836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005978597.1
SIO_010081: LOC121468836
subclass of: SO_0000673
so part of: LOC121468836
location: join(722842..722944,723148..723289,723553..723696,723843..723899)
location: region:722842-723899:1
so has part: feature:722842-722944:1:exon
so has part: feature:723148-723289:1:exon
so has part: feature:723553-723696:1:exon
so has part: feature:723843-723899:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722842-722944:1:exon

position:722944:1
position: 722944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:723148-723289:1:exon

position:723148:1
position: 723148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723289:1
position: 723289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723553-723696:1:exon

position:723553:1
position: 723553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723696:1
position: 723696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:723843-723899:1:exon

position:723843:1
position: 723843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LENG1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: LENG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(723929..732141)
location: region:723929-732141:-1
so has part: feature:723929-732141:-1:exon
subclass of: SO_0000010

121468834
type: Gene
SIO_000068: ncbigene

position:723929:-1
position: 723929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732141:-1
position: 732141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723929-732141:-1:exon

LENG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: LENG1
product: leukocyte receptor cluster member 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041712993.1
SIO_010081: LENG1
subclass of: SO_0000673
so part of: LENG1
location: complement(join(723929..724157,727135..727394,729779..729917,730347..732141))
location: region:723929-732141:-1
so has part: feature:730347-732141:-1:exon
so has part: feature:729779-729917:-1:exon
so has part: feature:727135-727394:-1:exon
so has part: feature:723929-724157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:730347-732141:-1:exon

position:730347:-1
position: 730347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:729779-729917:-1:exon

position:729779:-1
position: 729779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729917:-1
position: 729917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:727135-727394:-1:exon

position:727135:-1
position: 727135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727394:-1
position: 727394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:723929-724157:-1:exon

position:724157:-1
position: 724157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LENG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: LENG1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: leukocyte receptor cluster member 1
translation: MNILPKKSWHVRNKDNVARVRRDEAAAEVERRKRDARALRAEQEVRTELLRKRARLGGRSPSPPAAPALFPPPEEAAPNREHEAEKRREQERRERALGVLTYLGQSAAEAQTCPPWYLQPPKKPGEGSPEVQGGRKALLDPLQEMRKGLRRAPSPKKPPNPPQTRPPNAPESGAATGLAELRRQRRAREAAEAERSRELLERLRDPQKPTGTPQKSARDPPPERQRPYNSQFHPRLARGGPKGTPKFT
SIO_010081: LENG1
subclass of: SO_0000673
so part of: LENG1
location: complement(join(723941..724157,727135..727394,729779..729917,730347..730478))
location: region:723941-730478:-1
so has part: feature:730347-730478:-1:exon
so has part: feature:729779-729917:-1:exon
so has part: feature:727135-727394:-1:exon
so has part: feature:723941-724157:-1:exon

XP_041568927.1
type: Protein
SIO_000068: ncbiprotein

position:723941:-1
position: 723941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730478:-1
position: 730478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730347-730478:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:729779-729917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727135-727394:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:723941-724157:-1:exon

MBOAT7
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: MBOAT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(730686..755748)
location: region:730686-755748:-1
so has part: feature:730686-755748:-1:exon
subclass of: SO_0000010

121468818
type: Gene
SIO_000068: ncbigene

position:730686:-1
position: 730686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755748:-1
position: 755748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:730686-755748:-1:exon

MBOAT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: MBOAT7
product: membrane bound O-acyltransferase domain containing 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_041712964.1
SIO_010081: MBOAT7
subclass of: SO_0000673
so part of: MBOAT7
location: complement(join(730686..730774,732433..732929,734453..734629,736570..736924,740413..740569,742773..742899,748955..749084,755534..755748))
location: region:730686-755748:-1
so has part: feature:755534-755748:-1:exon
so has part: feature:748955-749084:-1:exon
so has part: feature:742773-742899:-1:exon
so has part: feature:740413-740569:-1:exon
so has part: feature:736570-736924:-1:exon
so has part: feature:734453-734629:-1:exon
so has part: feature:732433-732929:-1:exon
so has part: feature:730686-730774:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:755534-755748:-1:exon

position:755534:-1
position: 755534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:748955-749084:-1:exon

position:748955:-1
position: 748955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749084:-1
position: 749084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:742773-742899:-1:exon

position:742773:-1
position: 742773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742899:-1
position: 742899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:740413-740569:-1:exon

position:740413:-1
position: 740413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740569:-1
position: 740569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:736570-736924:-1:exon

position:736570:-1
position: 736570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736924:-1
position: 736924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:734453-734629:-1:exon

position:734453:-1
position: 734453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734629:-1
position: 734629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:732433-732929:-1:exon

position:732433:-1
position: 732433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732929:-1
position: 732929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:730686-730774:-1:exon

position:730774:-1
position: 730774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MBOAT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: MBOAT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysophospholipid acyltransferase 7
translation: MNREELTYLAVLLGSIPVGFVLKERGRRWRQFGGALVGVGVSLLTCGPHALHSLLTVLGSWALLACLPRHSGGAVLLWVLGYLFFFRTPQLWGLPEPPPHANALQLLLTLKLASLASDTQELREAELTGVTSEETRLLIGSLRRVPSLIDILCYSYCYLGLLTGPFYRLGTHLDWVRCPGCPRARGRALRRLRWAPALGVLGVLVGRAWPAGAALHPEFSARPWAARLAHMVPVFLALRLRLYVGWLCAEAGCVAAGLGAYPKSARARPGQGPTVPWERPKTCADIPDEQWDFEAIRTVDPRGTELGRRFRDGLRRWNMTVQWWLAAYVHRRGPRRYPLLRNAWTMLVSAYWHGLHGGQYLSFLSVPLWLAAEAAAEAALGDYFGVPLERLGGWRGSALRGTQWFLKMRAFEYLSVGFVLRGAADTLRYWASVHFCLHVLPLLILLAAAAAGKGRHKGREGEKGRKEGQENGREGEKGREGEKGREGEKGREGENGRENGREGEKGPTFSSPLTAQYGGKAGNRHFWPRPAEEDG
SIO_010081: MBOAT7
subclass of: SO_0000673
so part of: MBOAT7
location: complement(join(730686..730774,732433..732929,734453..734629,736570..736924,740413..740569,742773..742899,748955..749084,755534..755609))
location: region:730686-755609:-1
so has part: feature:755534-755609:-1:exon
so has part: feature:748955-749084:-1:exon
so has part: feature:742773-742899:-1:exon
so has part: feature:740413-740569:-1:exon
so has part: feature:736570-736924:-1:exon
so has part: feature:734453-734629:-1:exon
so has part: feature:732433-732929:-1:exon
so has part: feature:730686-730774:-1:exon

XP_041568898.1
type: Protein
SIO_000068: ncbiprotein

position:755609:-1
position: 755609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755534-755609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:748955-749084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:742773-742899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:740413-740569:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:736570-736924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:734453-734629:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:732433-732929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:730686-730774:-1:exon

TSEN34
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: TSEN34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 734582..760405
location: region:734582-760405:1
so has part: feature:734582-760405:1:exon
subclass of: SO_0000010

121468835
type: Gene
SIO_000068: ncbigene

position:734582:1
position: 734582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760405:1
position: 760405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734582-760405:1:exon

TSEN34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: TSEN34
product: tRNA splicing endonuclease subunit 34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_041712994.1
SIO_010081: TSEN34
subclass of: SO_0000673
so part of: TSEN34
location: join(734582..734638,755510..755585,756686..757005,757085..757262,760040..760405)
location: region:734582-760405:1
so has part: feature:734582-734638:1:exon
so has part: feature:755510-755585:1:exon
so has part: feature:756686-757005:1:exon
so has part: feature:757085-757262:1:exon
so has part: feature:760040-760405:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:734582-734638:1:exon

position:734638:1
position: 734638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:755510-755585:1:exon

position:755510:1
position: 755510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755585:1
position: 755585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:756686-757005:1:exon

position:756686:1
position: 756686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757005:1
position: 757005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:757085-757262:1:exon

position:757085:1
position: 757085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757262:1
position: 757262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:760040-760405:1:exon

position:760040:1
position: 760040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSEN34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: TSEN34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA-splicing endonuclease subunit Sen34
translation: MAAGAEGVPGLCGVAECSETPGTPPSPAAERPRVRRQRGRFLVWSPGAARALRERHRVWGALVGTPPRRGPRGGAAAGPRLPLQLRPEEARALRESGGATVEPVDEAEAEPSGGGAGGGARAVLATPLSRAERRSRVFRALWGRGLHLTRGGKFGGDFLVYPGPPAQFHACAVAQCPRSSRAQPLGALLAAARLCACVRKALLLCAAPPEGAASCTAITWRADLT
SIO_010081: TSEN34
subclass of: SO_0000673
so part of: TSEN34
location: join(756697..757005,757085..757262,760040..760230)
location: region:756697-760230:1
so has part: feature:756697-757005:1:exon
so has part: feature:757085-757262:1:exon
so has part: feature:760040-760230:1:exon

XP_041568928.1
type: Protein
SIO_000068: ncbiprotein

position:756697:1
position: 756697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760230:1
position: 760230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756697-757005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:757085-757262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760040-760230:1:exon

GRWD1
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: GRWD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(760308..774397)
location: region:760308-774397:-1
so has part: feature:760308-774397:-1:exon
subclass of: SO_0000010

121468832
type: Gene
SIO_000068: ncbigene

position:760308:-1
position: 760308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774397:-1
position: 774397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:760308-774397:-1:exon

GRWD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GRWD1
product: glutamate rich WD repeat containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041712992.1
SIO_010081: GRWD1
subclass of: SO_0000673
so part of: GRWD1
location: complement(join(760308..761399,764550..765061,766177..766377,768142..768281,769371..769596,770818..770986,771899..772016,774085..774397))
location: region:760308-774397:-1
so has part: feature:774085-774397:-1:exon
so has part: feature:771899-772016:-1:exon
so has part: feature:770818-770986:-1:exon
so has part: feature:769371-769596:-1:exon
so has part: feature:768142-768281:-1:exon
so has part: feature:766177-766377:-1:exon
so has part: feature:764550-765061:-1:exon
so has part: feature:760308-761399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774085-774397:-1:exon

position:774085:-1
position: 774085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:771899-772016:-1:exon

position:771899:-1
position: 771899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772016:-1
position: 772016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:770818-770986:-1:exon

position:770818:-1
position: 770818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770986:-1
position: 770986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:769371-769596:-1:exon

position:769371:-1
position: 769371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769596:-1
position: 769596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:768142-768281:-1:exon

position:768142:-1
position: 768142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768281:-1
position: 768281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:766177-766377:-1:exon

position:766177:-1
position: 766177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766377:-1
position: 766377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:764550-765061:-1:exon

position:764550:-1
position: 764550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765061:-1
position: 765061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:760308-761399:-1:exon

position:761399:-1
position: 761399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRWD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GRWD1
product: glutamate rich WD repeat containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_041712991.1
SIO_010081: GRWD1
subclass of: SO_0000673
so part of: GRWD1
location: complement(join(760308..761399,763721..765061,766177..766377,768142..768281,769371..769596,770818..770986,771899..772016,774085..774397))
location: region:760308-774397:-1
so has part: feature:774085-774397:-1:exon
so has part: feature:771899-772016:-1:exon
so has part: feature:770818-770986:-1:exon
so has part: feature:769371-769596:-1:exon
so has part: feature:768142-768281:-1:exon
so has part: feature:766177-766377:-1:exon
so has part: feature:763721-765061:-1:exon
so has part: feature:760308-761399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774085-774397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771899-772016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770818-770986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:769371-769596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768142-768281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766177-766377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763721-765061:-1:exon

position:763721:-1
position: 763721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:760308-761399:-1:exon

GRWD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: GRWD1
product: glutamate rich WD repeat containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_041712990.1
SIO_010081: GRWD1
subclass of: SO_0000673
so part of: GRWD1
location: complement(join(760308..761746,762701..765061,766177..766377,768142..768281,769371..769596,770818..770986,771899..772016,774085..774397))
location: region:760308-774397:-1
so has part: feature:774085-774397:-1:exon
so has part: feature:771899-772016:-1:exon
so has part: feature:770818-770986:-1:exon
so has part: feature:769371-769596:-1:exon
so has part: feature:768142-768281:-1:exon
so has part: feature:766177-766377:-1:exon
so has part: feature:762701-765061:-1:exon
so has part: feature:760308-761746:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774085-774397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771899-772016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770818-770986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:769371-769596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768142-768281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766177-766377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:762701-765061:-1:exon

position:762701:-1
position: 762701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:760308-761746:-1:exon

position:761746:-1
position: 761746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRWD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GRWD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich WD repeat-containing protein 1
translation: MAARRGASRARAPNRPRAANRDRPRPRARNRHTADAEPSGRVYLPGAGPPLGPDEELVMDEEAYVMYHRAGTGAPCLSFDVVRDGLGEGREEPPLSVLLCAGTQAETPSANRVLLLQMQNLHGMRGRKDSDSDSDSDSDSEEDEEEEGREPQLLLLMAPHYGGVNRLRVTSLGGSPIAAVWSERGQVEVLALEGALRVLGMQFGEGDSGRGPKSVQQGALPALATFSGHLDEGFGLDWSPQSPGRLLSGDVRGRIHRWEPREAGWAVDQRPLLGHSGSVEDIQWSPCEASVFISCSSDASIRVWDVRAPPARACQLSVASAHQGDVNVLSWSRRDAAALLSGGDDGALRLWDLRSIRLSSSCVATFKQHRGPITSVQWHPGESGVLAAAGEDDVVTQWDLGVERDPEVGEGPGDGEGLRELPPQLLFLHQGEREVKELHWHPQCPGLLLCTGREGIAAFRTISV
SIO_010081: GRWD1
subclass of: SO_0000673
so part of: GRWD1
location: complement(join(764738..765061,766177..766377,768142..768281,769371..769596,770818..770986,771899..772016,774085..774301))
location: region:764738-774301:-1
so has part: feature:774085-774301:-1:exon
so has part: feature:771899-772016:-1:exon
so has part: feature:770818-770986:-1:exon
so has part: feature:769371-769596:-1:exon
so has part: feature:768142-768281:-1:exon
so has part: feature:766177-766377:-1:exon
so has part: feature:764738-765061:-1:exon

XP_041568924.1
type: Protein
SIO_000068: ncbiprotein

position:764738:-1
position: 764738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774301:-1
position: 774301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774085-774301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771899-772016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770818-770986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:769371-769596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768142-768281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766177-766377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764738-765061:-1:exon

GRWD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GRWD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich WD repeat-containing protein 1
translation: MAARRGASRARAPNRPRAANRDRPRPRARNRHTADAEPSGRVYLPGAGPPLGPDEELVMDEEAYVMYHRAGTGAPCLSFDVVRDGLGEGREEPPLSVLLCAGTQAETPSANRVLLLQMQNLHGMRGRKDSDSDSDSDSDSEEDEEEEGREPQLLLLMAPHYGGVNRLRVTSLGGSPIAAVWSERGQVEVLALEGALRVLGMQFGEGDSGRGPKSVQQGALPALATFSGHLDEGFGLDWSPQSPGRLLSGDVRGRIHRWEPREAGWAVDQRPLLGHSGSVEDIQWSPCEASVFISCSSDASIRVWDVRAPPARACQLSVASAHQGDVNVLSWSRRDAAALLSGGDDGALRLWDLRSIRLSSSCVATFKQHRGPITSVQWHPGESGVLAAAGEDDVVTQWDLGVERDPEVGEGPGDGEGLRELPPQLLFLHQGEREVKELHWHPQCPGLLLCTGREGIAAFRTISV
SIO_010081: GRWD1
subclass of: SO_0000673
so part of: GRWD1
location: complement(join(764738..765061,766177..766377,768142..768281,769371..769596,770818..770986,771899..772016,774085..774301))
location: region:764738-774301:-1
so has part: feature:774085-774301:-1:exon
so has part: feature:771899-772016:-1:exon
so has part: feature:770818-770986:-1:exon
so has part: feature:769371-769596:-1:exon
so has part: feature:768142-768281:-1:exon
so has part: feature:766177-766377:-1:exon
so has part: feature:764738-765061:-1:exon

XP_041568925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:774085-774301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771899-772016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770818-770986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:769371-769596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768142-768281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766177-766377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764738-765061:-1:exon

GRWD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 59729
gene: GRWD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich WD repeat-containing protein 1
translation: MAARRGASRARAPNRPRAANRDRPRPRARNRHTADAEPSGRVYLPGAGPPLGPDEELVMDEEAYVMYHRAGTGAPCLSFDVVRDGLGEGREEPPLSVLLCAGTQAETPSANRVLLLQMQNLHGMRGRKDSDSDSDSDSDSEEDEEEEGREPQLLLLMAPHYGGVNRLRVTSLGGSPIAAVWSERGQVEVLALEGALRVLGMQFGEGDSGRGPKSVQQGALPALATFSGHLDEGFGLDWSPQSPGRLLSGDVRGRIHRWEPREAGWAVDQRPLLGHSGSVEDIQWSPCEASVFISCSSDASIRVWDVRAPPARACQLSVASAHQGDVNVLSWSRRDAAALLSGGDDGALRLWDLRSIRLSSSCVATFKQHRGPITSVQWHPGESGVLAAAGEDDVVTQWDLGVERDPEVGEGPGDGEGLRELPPQLLFLHQGEREVKELHWHPQCPGLLLCTGREGIAAFRTISV
SIO_010081: GRWD1
subclass of: SO_0000673
so part of: GRWD1
location: complement(join(764738..765061,766177..766377,768142..768281,769371..769596,770818..770986,771899..772016,774085..774301))
location: region:764738-774301:-1
so has part: feature:774085-774301:-1:exon
so has part: feature:771899-772016:-1:exon
so has part: feature:770818-770986:-1:exon
so has part: feature:769371-769596:-1:exon
so has part: feature:768142-768281:-1:exon
so has part: feature:766177-766377:-1:exon
so has part: feature:764738-765061:-1:exon

XP_041568926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:774085-774301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:771899-772016:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:770818-770986:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:769371-769596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:768142-768281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766177-766377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:764738-765061:-1:exon

CPT1C
type: Gene
subclass of: SO_0000704
RO_0002162: 59729
gene: CPT1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(775040..790724)
location: region:775040-790724:-1
so has part: feature:775040-790724:-1:exon
subclass of: SO_0000010

121468851
type: Gene
SIO_000068: ncbigene

position:775040:-1
position: 775040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790724:-1
position: 790724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775040-790724:-1:exon

CPT1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CPT1C
product: carnitine palmitoyltransferase 1C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_041713027.1
SIO_010081: CPT1C
subclass of: SO_0000673
so part of: CPT1C
location: complement(join(775040..775147,778428..778523,779495..779596,780338..780490,782944..783075,785225..785383,786501..786617,789391..789496,790491..790724))
location: region:775040-790724:-1
so has part: feature:790491-790724:-1:exon
so has part: feature:789391-789496:-1:exon
so has part: feature:786501-786617:-1:exon
so has part: feature:785225-785383:-1:exon
so has part: feature:782944-783075:-1:exon
so has part: feature:780338-780490:-1:exon
so has part: feature:779495-779596:-1:exon
so has part: feature:778428-778523:-1:exon
so has part: feature:775040-775147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:790491-790724:-1:exon

position:790491:-1
position: 790491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:789391-789496:-1:exon

position:789391:-1
position: 789391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789496:-1
position: 789496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:786501-786617:-1:exon

position:786501:-1
position: 786501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786617:-1
position: 786617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:785225-785383:-1:exon

position:785225:-1
position: 785225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785383:-1
position: 785383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:782944-783075:-1:exon

position:782944:-1
position: 782944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783075:-1
position: 783075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:780338-780490:-1:exon

position:780338:-1
position: 780338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780490:-1
position: 780490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:779495-779596:-1:exon

position:779495:-1
position: 779495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779596:-1
position: 779596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:778428-778523:-1:exon

position:778428:-1
position: 778428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778523:-1
position: 778523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:775040-775147:-1:exon

position:775147:-1
position: 775147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CPT1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CPT1C
product: carnitine palmitoyltransferase 1C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_041713025.1
SIO_010081: CPT1C
subclass of: SO_0000673
so part of: CPT1C
location: complement(join(775040..775147,778428..778523,779495..779623,780338..780490,782944..783075,785225..785383,786501..786617,789391..789496,790491..790724))
location: region:775040-790724:-1
so has part: feature:790491-790724:-1:exon
so has part: feature:789391-789496:-1:exon
so has part: feature:786501-786617:-1:exon
so has part: feature:785225-785383:-1:exon
so has part: feature:782944-783075:-1:exon
so has part: feature:780338-780490:-1:exon
so has part: feature:779495-779623:-1:exon
so has part: feature:778428-778523:-1:exon
so has part: feature:775040-775147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:790491-790724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789391-789496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:786501-786617:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:785225-785383:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:782944-783075:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:780338-780490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:779495-779623:-1:exon

position:779623:-1
position: 779623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:778428-778523:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775040-775147:-1:exon

CPT1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 59729
gene: CPT1C
product: carnitine palmitoyltransferase 1C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_041713026.1
SIO_010081: CPT1C
subclass of: SO_0000673
so part of: CPT1C
location: complement(join(775040..775147,778428..778523,779495..779601,780343..780490,782944..783075,785225..785383,786501..786617,789391..789496,790491..790723))
location: region:775040-790723:-1
so has part: feature:790491-790723:-1:exon
so has part: feature:789391-789496:-1:exon
so has part: feature:786501-786617:-1:exon
so has part: feature:785225-785383:-1:exon
so has part: feature:782944-783075:-1:exon
so has part: feature:780343-780490:-1:exon
so has part: feature:779495-779601:-1:exon
so has part: feature:778428-778523:-1:exon
so has part: feature:775040-775147:-1:exon

position:790723:-1
position: 790723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790491-790723:-1:exon